Psyllid ID: psy10163

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-----
Protein Sequence
NTSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAEDPVGQRPAAVIGEDPTSESNGTTTRIGNSAVNSTMEAVRAITTGSIPGRNVRRCVARRIR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEcccccccEEEcccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccEEEcccccEEEcccccccccEEEEEccccccccccccccccccccEEEEEccccccccEEEccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccEEcccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHcccccccccccccccEEccccccccccccccHHHHHEccccccccccEEEEEEEccccEEEEEEEcccccccccEccHHHHHHHccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccEEcccccEEEEcccccccccEEcccccccccccccccccccccccEEEEEEccccEEEEEEEccEccccccEccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEEccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
NTSCFLQFIAKdiclqpavigdcANYVLTWyydsntscfpqfiakdiclqpavigdcANYVLTWYYDSLEARCRQfyyggcggnqnnfmteEACQArcaggtfvtssaapdqlenriavaspprfhnyseptveaeegnfVTLRCIAigypipvytwskgevsRKFFLRGFisandlcflesesgpctqqeaawyfdrnsfitmpeltpntflFQWTCvisgknarcrcfnpcqnqdpqcpsntrcavdlvrnpetretqYIAVCRplykegecrpqpqnvcadnckddadctgqakccpndcgyscsnlfdittttttvspaypvytstpytpnipspprfhnyseptveaeegnfVTLRCIAigypipvytwskgevsidgsdghykLTLDGVLQIVGLVRQDAGIYVCVAangigdpirkeFNVIVRGNYeqwyydrdtdscqpfqyggcqgnhnrfndqwscqkrcvqnipppdpaqtpsttlaprqeaarndlcflesesgpctqqeaawyfdrntyrcqsfiyggcegnanrfnTEEQCERLCgefraedpvgqrpaavigedptsesngtttrignsaVNSTMEAVRAIttgsipgrnvRRCVARRIR
Flexible Loop (DISEMBL)
NTSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPcqnqdpqcpsntRCAVDLvrnpetretqyIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVaangigdpirkeFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFraedpvgqrpaavigedptsesngtttrignsavnstMEAVRaittgsipgrnvrrcvarrir
Low Complexity Region (SEG)
NTSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDIttttttVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAEDPVGQRPAAVIGEDPTSESNGTTTRIGNSAVNSTMEAVRAITTGSIPGrnvrrcvarrir
Disordered region (IsUnstruct)
***CFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTS**************************VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLF*****************************************EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ*************************LCFLES**GPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF***************************************************************
Disordered Region (DISOPRED)
*************CLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI******YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRA*******************SNGTTTRIGNSAVNSTMEAVRAITTGSIPGRNVRRCVA****
Disordered Region (DISEMBL)
NTSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPP************RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAEDPVGQRPAAVIGE**********TRIGNSAVNSTMEAVRAITTGSIPGRNVRRCVARRIR
Disordered Region (DISPRO)
*TSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG***************IAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPE******IAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ**********************RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAEDPVGQRPAAVIGEDPTSESNGTTTRIGNSAVNSTMEAVRAITTGSIPGRNVR*C******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
NTSCFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAEDPVGQRPAAVIGEDPTSESNGTTTRIGNSAVNSTMEAVRAITTGSIPGRNVRRCVARRIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	615	2.2.26 [Sep-21-2011]
Q868Z9	2898	Papilin OS=Drosophila mel	no	N/A	0.6	0.127	0.272	3e-35
Q08E66	574	WAP, Kazal, immunoglobuli	yes	N/A	0.331	0.355	0.277	5e-17
Q6NUX0	558	WAP, Kazal, immunoglobuli	no	N/A	0.302	0.333	0.276	9e-17
Q8TEU8	576	WAP, Kazal, immunoglobuli	yes	N/A	0.331	0.354	0.273	1e-16
O76840	2167	Papilin OS=Caenorhabditis	yes	N/A	0.175	0.049	0.380	3e-16
Q96NZ8	548	WAP, Kazal, immunoglobuli	no	N/A	0.321	0.361	0.265	4e-16
Q8R0S6	552	WAP, Kazal, immunoglobuli	no	N/A	0.323	0.360	0.262	1e-15
Q7TQN3	571	WAP, Kazal, immunoglobuli	no	N/A	0.331	0.357	0.270	2e-15
Q02445	302	Tissue factor pathway inh	yes	N/A	0.182	0.370	0.344	2e-15
O54819	306	Tissue factor pathway inh	no	N/A	0.178	0.359	0.341	2e-15

>sp|Q868Z9|PPN_DROME Papilin OS=Drosophila melanogaster GN=Ppn PE=1 SV=2

 Score =  150 bits (378), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 179/466 (38%), Gaps = 97/466 (20%)

Query: 13   ICLQPAVIGDCANYVLTWYYDS-NTSCFP------------------------QFIAKDI 47
            +C +P   G+C N    W+YDS N +C                          +F   D+
Sbjct: 2193 VCAEPPEAGECDNRTTAWFYDSENMACTAFTYTGCGGNGNRFETRDQCERQCGEFKGVDV 2252

Query: 48   CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSS 107
            C +P   G C ++   +Y+++    C  F YGGC G  N F     CQ  C  G      
Sbjct: 2253 CNEPVTTGPCTDWQTKYYFNTASQACEPFTYGGCDGTGNRFSDLFECQTVCLAGREPRVG 2312

Query: 108  AAPDQLENRIAVA--SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRK 165
            +A +     +A    + P  H       + E GN V+           +Y    G  +  
Sbjct: 2313 SAKEICLLPVATGRCNGPSVHERRW-YYDDEAGNCVSF----------IYAGCSGNQNN- 2360

Query: 166  FFLRGFISANDLCFLESES--------------GPCTQQEAAWYFDRNSFITMPELTPNT 211
               R F +  + C  E                   C +    +   R +  + PE T   
Sbjct: 2361 --FRSFEACTNQCRPEPNKQDNEIGQNPCDTFDAECQELRCPYGVRRVAARSQPECT--- 2415

Query: 212  FLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKE 271
                          +C C NPC+     CP   +CA+D+     + + Q+  VCR +YK 
Sbjct: 2416 --------------QCICENPCEGY--SCPEGQQCAIDVA---SSDDRQFAPVCRDIYKP 2456

Query: 272  GECRPQPQNV--CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTS 329
            GEC     N   CA  C  DADC G  KCC + CG  C            V PA P    
Sbjct: 2457 GECPALSANASGCARECYTDADCRGDNKCCSDGCGQLC------------VHPARPTQPP 2504

Query: 330  TPYTPNIPSPPRFHNYSEPT------VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG 383
                P +  P       EP       V+   G    LRC A G P P  TWS   + I+ 
Sbjct: 2505 RTQAPVVSYPGDARAALEPKEAHELDVQTAIGGIAVLRCFATGNPAPNITWSLKNLVINT 2564

Query: 384  SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            + G Y LT +G L IV + + D G YVCVA+NG+G+P+R+E  + V
Sbjct: 2565 NKGRYVLTANGDLTIVQVRQTDDGTYVCVASNGLGEPVRREVALQV 2610

Essential extracellular matrix (ECM) protein that influences cell rearrangements. May act by modulating metalloproteinases action during organogenesis. Able to non-competitively inhibit procollagen N-proteinase, an ADAMTS metalloproteinase.
Drosophila melanogaster (taxid: 7227)

>sp|Q08E66|WFKN2_BOVIN WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 OS=Bos taurus GN=WFIKKN2 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 108/274 (39%), Gaps = 70/274 (25%)

Query: 318 TTVSPAYPVYTSTPYTPNI--PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWS 375
           TTV P     T+ P TP +   +P   ++ +  +V    G  V+  C  +G P P  TW 
Sbjct: 189 TTVHPT----TAPPETPGLDATAPALLNHPAHQSVTV--GETVSFLCDVVGRPRPEITWE 242

Query: 376 KG-------EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV- 427
           K         +  +   G+  +T    L I     QDAGIY C A N  G  +R +F + 
Sbjct: 243 KQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQPQDAGIYTCTARNAAG-VLRADFPLS 301

Query: 428 IVRGNYE--------------------------------QWYYDRDTDSCQPFQYGGCQG 455
           +V G                                   +WY+D   ++C  F +G C  
Sbjct: 302 VVSGGQASATAESSPNGTALPAAECLKPPDSDDCGEEQTRWYFDAQANNCLTFTFGHCHR 361

Query: 456 NHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAW 515
           N N F    +C   C+            S +LA         +C L +  GPC      W
Sbjct: 362 NRNHFETYEACMLACM------------SGSLA---------MCSLPALQGPCKAYVPRW 400

Query: 516 YFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
            ++  T +CQSF+YGGCEGN N F + E CE  C
Sbjct: 401 AYNSQTGQCQSFVYGGCEGNGNNFESREDCEESC 434

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity. Inhibits the biological activity of mature myostatin, but not activin.

Bos taurus (taxid: 9913)

>sp|Q6NUX0|WFKN_DANRE WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein OS=Danio rerio GN=wfikkn PE=2 SV=1

 Score = 89.4 bits (220), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 101/253 (39%), Gaps = 67/253 (26%)

Query: 345 YSEPTVEAE-EGNFVTLRCIAIGYPIPVYTWSKGE-------VSIDGSDGHYKLTLDGVL 396
           YS P  +    G  V+  C  IG P P  TW K         +  D   G+  +T  G L
Sbjct: 196 YSSPQQQVTYLGGTVSFHCDVIGQPKPEVTWEKQSDEQEQVVMRADQMFGNVVITSIGQL 255

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQ--------------------- 435
            +      D+GIY CVA N  G  +R +F++ V  + +Q                     
Sbjct: 256 VVYNAQVWDSGIYSCVARNSAG-VLRADFSLSVVSHADQDFFDDPAAGLPLGRPFSPADC 314

Query: 436 ---------------WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPA 480
                          W++D    SC  F +GGC+G  NRF+    C+  C          
Sbjct: 315 SAAVERGDCGEKRVDWFFDPARGSCHTFTHGGCEGR-NRFHTFEECRASC---------- 363

Query: 481 QTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFN 540
                    R+  A   +C L +  GPC   +A W+++  T RC++F+YGGC GN N F 
Sbjct: 364 --------QREGQA---VCSLPAVQGPCRHWQARWFYNSLTERCEAFLYGGCSGNKNSFG 412

Query: 541 TEEQCERLCGEFR 553
           T  +C+  C   R
Sbjct: 413 TRRECDAHCPTHR 425

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity.

Danio rerio (taxid: 7955)

>sp|Q8TEU8|WFKN2_HUMAN WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 OS=Homo sapiens GN=WFIKKN2 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 70/274 (25%)

Query: 318 TTVSPAYPVYTSTPYTP--NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWS 375
           TT+ P     T++P TP  ++ +P   +N    +V    G  V+  C  +G P P  TW 
Sbjct: 191 TTMHPT----TASPETPELDMAAPALLNNPVHQSVTM--GETVSFLCDVVGRPRPEITWE 244

Query: 376 KGE-------VSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV- 427
           K         +  +   G+  +T    L I     QDAGIY C A N +   +R +F + 
Sbjct: 245 KQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARN-VAGVLRADFPLS 303

Query: 428 IVRGNYE--------------------------------QWYYDRDTDSCQPFQYGGCQG 455
           +VRG+                                  +W++D   ++C  F +G C  
Sbjct: 304 VVRGHQAAATSESSPNGTAFPAAECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHR 363

Query: 456 NHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAW 515
           N N F    +C   C+            S  LA          C L +  GPC      W
Sbjct: 364 NLNHFETYEACMLACM------------SGPLA---------ACSLPALQGPCKAYAPRW 402

Query: 516 YFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
            ++  T +CQSF+YGGCEGN N F + E CE  C
Sbjct: 403 AYNSQTGQCQSFVYGGCEGNGNNFESREACEESC 436

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity. Inhibits the biological activity of mature myostatin, but not activin.

Homo sapiens (taxid: 9606)

>sp|O76840|PPN1_CAEEL Papilin OS=Caenorhabditis elegans GN=mig-6 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 18/126 (14%)

Query: 436  WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAAR 495
            WY+D     C+PF YGGC+GN NRF  +  CQ+ C        P  T S           
Sbjct: 1869 WYFDSTHLDCKPFTYGGCRGNQNRFVSKEQCQQSCR-------PGDTKS----------- 1910

Query: 496  NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAE 555
             D+C L  E GPC      +++D     C  F YGGCEGNANRF++E  C R C   + E
Sbjct: 1911 EDICTLRPEPGPCRLGLEKYFYDPVIQSCHMFHYGGCEGNANRFDSELDCFRRCSSVKVE 1970

Query: 556  DPVGQR 561
                +R
Sbjct: 1971 ASESER 1976

Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.

Caenorhabditis elegans (taxid: 6239)

>sp|Q96NZ8|WFKN1_HUMAN WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1 OS=Homo sapiens GN=WFIKKN1 PE=1 SV=1

 Score = 87.0 bits (214), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 94/260 (36%), Gaps = 62/260 (23%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEE-GNFVTLRCIAIGYPIPVYTWSKGE-------V 379
           T+ P     P PP    YS P+ +A + G   +L C   G P P  TW K         +
Sbjct: 174 TARPTPGAAPVPPAL--YSSPSPQAVQVGGTASLHCDVSGRPPPAVTWEKQSHQRENLIM 231

Query: 380 SIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV---------- 429
             D   G+  +T  G L +     +DAG+Y C A N  G  +R +F + V          
Sbjct: 232 RPDQMYGNVVVTSIGQLVLYNARPEDAGLYTCTARNAAGL-LRADFPLSVVQREPARDAA 290

Query: 430 --------------------RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKR 469
                                 +   W+YD     C  F   GC G    F    +CQ+ 
Sbjct: 291 PSIPAPAECLPDVQACTGPTSPHLVLWHYDPQRGGCMTFPARGCDGAARGFETYEACQQA 350

Query: 470 CVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIY 529
           C +                        D C L +  GPC   E  W +     +C  F+Y
Sbjct: 351 CARG---------------------PGDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVY 389

Query: 530 GGCEGNANRFNTEEQCERLC 549
           GGCEGN N F++ E CE  C
Sbjct: 390 GGCEGNGNNFHSRESCEDAC 409

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity.

Homo sapiens (taxid: 9606)

>sp|Q8R0S6|WFKN1_MOUSE WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1 OS=Mus musculus GN=Wfikkn1 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 93/259 (35%), Gaps = 60/259 (23%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE-------VS 380
           T+ P     P PP  +N   P      G   +L C   G P P  TW K         + 
Sbjct: 178 TARPTPGAAPMPPALYNSPSPQA-VHVGGTASLHCDVSGRPPPAVTWEKQSHQRENLIMR 236

Query: 381 IDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF--NVIVRG------- 431
            D   G+  +T  G L +     +DAG+Y C A N  G  +R +F  +V+ R        
Sbjct: 237 PDQMYGNVVVTSIGQLVLYNAQLEDAGLYTCTARNAAGL-LRADFPLSVLQRATTQDRDP 295

Query: 432 ---------------------NYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
                                ++  W +D    SC  F    C G    F    +CQ+ C
Sbjct: 296 GIPALAECQADTQACVGPPTPHHVLWRFDPQRGSCMTFPALRCDGAARGFETYEACQQAC 355

Query: 471 VQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYG 530
           V+                        D+C L +  GPC   E  W +     +C  F+Y 
Sbjct: 356 VRG---------------------PGDVCALPAVQGPCQGWEPRWAYSPLLQQCHPFVYS 394

Query: 531 GCEGNANRFNTEEQCERLC 549
           GCEGN+N F T E CE  C
Sbjct: 395 GCEGNSNNFETRESCEDAC 413

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity.

Mus musculus (taxid: 10090)

>sp|Q7TQN3|WFKN2_MOUSE WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 OS=Mus musculus GN=Wfikkn2 PE=1 SV=2

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 108/274 (39%), Gaps = 70/274 (25%)

Query: 318 TTVSPAYPVYTSTPYTP--NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWS 375
           TTV P     T++P T   ++ +P   ++    +V    G  V+  C  +G P P  TW 
Sbjct: 186 TTVHPT----TASPETLGLDMAAPALLNHPVHQSVTV--GETVSFLCDVVGRPRPELTWE 239

Query: 376 KGE-------VSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV- 427
           K         +  +   G+  +T    L I  +  QDAGIY C A N +   +R +F + 
Sbjct: 240 KQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNVQPQDAGIYTCTARN-VAGVLRADFPLS 298

Query: 428 IVRGNYEQ--------------------------------WYYDRDTDSCQPFQYGGCQG 455
           +VRG   +                                W++D   ++C  F +G C  
Sbjct: 299 VVRGGQARATSESSLNGTAFPATECLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHH 358

Query: 456 NHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAW 515
           N N F    +C   C+            S  LA         +C L +  GPC      W
Sbjct: 359 NLNHFETYEACMLACM------------SGPLA---------ICSLPALQGPCKAYVPRW 397

Query: 516 YFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
            ++  T  CQSF+YGGCEGN N F + E CE  C
Sbjct: 398 AYNSQTGLCQSFVYGGCEGNGNNFESREACEESC 431

Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease-inhibitor activity (By similarity). Inhibits the biological activity of mature myostatin, but not activin.

Mus musculus (taxid: 10090)

>sp|Q02445|TFPI1_RAT Tissue factor pathway inhibitor OS=Rattus norvegicus GN=Tfpi PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAAR 495
           +Y++ ++  C+ F YGGC+GN NRF+    C+K C+             TT+     A +
Sbjct: 69  YYFNMNSHQCEEFIYGGCRGNKNRFDTLEECRKTCIPGYK--------KTTIKTTSGAEK 120

Query: 496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAE 555
            D CFLE + G C      ++++  + +C+ F YGGC GN+N F T E+C   C     E
Sbjct: 121 PDFCFLEEDPGICRGFMTRYFYNNQSKQCEQFKYGGCLGNSNNFETLEECRNTC-----E 175

Query: 556 DPVGQ 560
           DPV +
Sbjct: 176 DPVNE 180

Inhibits factor X (X(a)) directly and, in a Xa-dependent way, inhibits VIIa/tissue factor activity, presumably by forming a quaternary Xa/LACI/VIIa/TF complex. It possesses an antithrombotic action and also the ability to associate with lipoproteins in plasma.

Rattus norvegicus (taxid: 10116)

>sp|O54819|TFPI1_MOUSE Tissue factor pathway inhibitor OS=Mus musculus GN=Tfpi PE=2 SV=1

 Score = 84.3 bits (207), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAAR 495
           ++++  T  C+ F YGGC+GN NRF+    C+K C+             T +     A R
Sbjct: 66  YFFNMYTHQCEEFIYGGCEGNENRFDTLEECKKTCIPGYE--------KTAVKAASGAER 117

Query: 496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAE 555
            D CFLE + G C      + ++  T +C+ F+YGGC GN N F T ++C+++C     E
Sbjct: 118 PDFCFLEEDPGLCRGYMKRYLYNNQTKQCERFVYGGCLGNRNNFETLDECKKIC-----E 172

Query: 556 DPV 558
           +PV
Sbjct: 173 NPV 175

Inhibits factor X (X(a)) directly and, in a Xa-dependent way, inhibits VIIa/tissue factor activity, presumably by forming a quaternary Xa/LACI/VIIa/TF complex. It possesses an antithrombotic action and also the ability to associate with lipoproteins in plasma.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	615
383852694	2894	PREDICTED: papilin-like [Megachile rotun	0.626	0.133	0.308	4e-43
340713638	3067	PREDICTED: papilin-like [Bombus terrestr	0.629	0.126	0.309	4e-43
350422357	2962	PREDICTED: LOW QUALITY PROTEIN: papilin-	0.630	0.130	0.314	6e-43
380025477	2813	PREDICTED: papilin-like [Apis florea]	0.632	0.138	0.308	7e-42
170031256	2472	papilin [Culex quinquefasciatus] gi|1678	0.560	0.139	0.323	2e-40
328724570	2494	PREDICTED: papilin-like isoform 2 [Acyrt	0.317	0.078	0.480	8e-40
328724572	2553	PREDICTED: papilin-like isoform 1 [Acyrt	0.317	0.076	0.480	1e-39
345489863	2588	PREDICTED: papilin-like [Nasonia vitripe	0.614	0.146	0.286	2e-37
390177741	2176	GA17283, isoform B [Drosophila pseudoobs	0.627	0.177	0.278	6e-37
270010741	2771	hypothetical protein TcasGA2_TC010195 [T	0.655	0.145	0.277	1e-36

>gi|383852694|ref|XP_003701860.1| PREDICTED: papilin-like [Megachile rotundata]

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 193/454 (42%), Gaps = 69/454 (15%)

Query: 13   ICLQPAVIGDCANYVLTWYYDS-NTSCFP------------------------QFIAKDI 47
            IC  P   G C N +  +YYD+ N +C                          +F  +D 
Sbjct: 2149 ICFTPVDPGSCNNDITAYYYDAQNQACQAFTYGGCEGNANRFQTEEQCERLCGRFQGQDT 2208

Query: 48   CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSS 107
            C  PA  GDC      +YYD +   CR+F YGGC GN N F T   C + C         
Sbjct: 2209 CNLPADPGDCRGSFRKYYYDPVSRICREFIYGGCEGNANRFSTMNECVSICIHHEEPVPP 2268

Query: 108  AAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFF 167
                 L +      P    + +  + +    +     C A      +YT   G  +R   
Sbjct: 2269 GNDTNLSSLSICKEPVDIGSCTSGSTKRFYFDEEQQTCRAF-----IYTGCGGNRNR--- 2320

Query: 168  LRGFISANDLCF-----LESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISG 222
             + F S  + C      ++ ESG   +   A   +  S I  P      F+    C    
Sbjct: 2321 FKTFESCINTCLSTTNEIDVESGKNVKDPCAEAREECSIIRCP-YGKEAFVDSQDC---- 2375

Query: 223  KNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGEC-RPQPQNV 281
               RCRC +PC+ Q   CP  T+CA+ LV   +   T+Y  VCR + K G C R      
Sbjct: 2376 --ERCRCVDPCRTQ--ICPDGTKCAITLVATKDG--TEYKGVCRSVTKPGRCPRVSNSTG 2429

Query: 282  CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPP- 340
            C   C  DADCTG+ KCC   CG SC            + PA  V  ++P  P + +PP 
Sbjct: 2430 CEQECITDADCTGEMKCCNTGCGTSC------------LEPAAEVPETSPR-PWVTAPPA 2476

Query: 341  -----RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
                       EP V A+EG +VTL+C+A+G P P  TW K    I  S+   ++ LDG 
Sbjct: 2477 GAEPASIKQPEEPKVSAQEGGYVTLQCLALGNPKPTITWRKDTTLIGPSENRRRILLDGS 2536

Query: 396  LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            LQI+ L R D G YVC A NG+G P+R E+ +++
Sbjct: 2537 LQIINLYRYDGGTYVCTADNGLGPPVRAEYQLVI 2570

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713638|ref|XP_003395347.1| PREDICTED: papilin-like [Bombus terrestris]

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 205/469 (43%), Gaps = 82/469 (17%)

Query: 6    LQFIAKD-ICLQPAVIGDCANYVLTWYYDSNTSCFPQFI--------------------- 43
            ++ ++K+ IC +    G C   +  +YYDS+      FI                     
Sbjct: 2308 VETVSKNPICYKTVDPGSCNGDITAYYYDSHNQLCQAFIYGGCEGNANRFQTEEQCERLC 2367

Query: 44   ----AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC- 98
                 +D+C  P   G C      +YYD +   CR+F YGGC GN N F T   C++ C 
Sbjct: 2368 GKFHGQDMCNLPVDSGVCRGSFPKYYYDYVSRVCREFLYGGCEGNANRFSTMAECESICI 2427

Query: 99   --------AGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 150
                      GT ++S +   +  +  + AS    H         +   F   +    G+
Sbjct: 2428 HHEEPVPPGNGTSLSSLSICKEPVDTGSCASGRHDH--------TKRFYFDDEQQTCRGF 2479

Query: 151  PIPVYTWSKGEVSRKFFLRGFISA-----NDLCFLESESGPCTQQEAAWYFDRNSFITMP 205
               +YT   G  +R       IS      N++   E++  PC +        R  +    
Sbjct: 2480 ---IYTGCGGNRNRFKTFESCISTCLTTTNEIDSEENKKDPCAEAREECNMIRCPY---- 2532

Query: 206  ELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVC 265
                  F+    C       RCRC +PC+ Q   CP +T+CA+ LV   +   T+Y  VC
Sbjct: 2533 --GKEEFVDSQDC------GRCRCVDPCRTQ--ACPDDTKCAITLVGTEDG--TEYRGVC 2580

Query: 266  RPLYKEGECRPQPQNV--CADNCKDDADCTGQAKCCPNDCGYSCSN-LFDITTTTTTVSP 322
            R + K G C P   N   C   C  DADCTG+ KCC N CG SC     D   +TT    
Sbjct: 2581 RSVTKPGRC-PSVSNSTRCEQECLTDADCTGEMKCCNNGCGASCLEPAVDEVLSTT---- 2635

Query: 323  AYPVYTSTPY--TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVS 380
              PV T+ P    P    PP      EP V A+EG +VTL+C+A G+P P  TW KG + 
Sbjct: 2636 PRPVITARPVGSEPASIKPPE-----EPNVSAQEGGYVTLKCVAFGHPKPTITWRKGTML 2690

Query: 381  IDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            I  S+   ++ LDG LQI+ L R D G YVC A NG+G P+R E+ ++V
Sbjct: 2691 IAASESRRRILLDGSLQIINLDRYDGGTYVCTADNGLGPPVRVEYQLVV 2739

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422357|ref|XP_003493139.1| PREDICTED: LOW QUALITY PROTEIN: papilin-like [Bombus impatiens]

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 211/468 (45%), Gaps = 80/468 (17%)

Query: 6    LQFIAKD-ICLQPAVIGDCANYVLTWYYDSNTSCFPQFI--------------------- 43
            ++ ++K+ IC +    G C   +  +YYDS+      FI                     
Sbjct: 2203 VETVSKNPICYKTVDPGSCNGDITAYYYDSHNQLCQAFIYGGCEGNANRFQTEEQCERLC 2262

Query: 44   ----AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC- 98
                 +D+C  P   G C      +YYD +   CR+F YGGC GN N F T   C++ C 
Sbjct: 2263 GKFHGQDMCNLPVDSGVCRGSFAKYYYDYVSRVCREFLYGGCEGNANRFSTMAECESICI 2322

Query: 99   --------AGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 150
                      GT ++S +   +  +  + AS    H+Y++     +E    T R    G+
Sbjct: 2323 HHEEPVPPGNGTSLSSLSICKEPVDTGSCAS--GRHDYTKRFYFDDEQQ--TCR----GF 2374

Query: 151  PIPVYTWSKGEVSRKFFLRGFISA-----NDLCFLESESGPCTQQEAAWYFDRNSFITMP 205
               +YT   G  +R       IS      N++   E++  PC +       +  + I  P
Sbjct: 2375 ---IYTGCGGNRNRFKTFESCISTCLTTTNEIDSEENKKDPCAEAR-----EECNMIRCP 2426

Query: 206  ELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVC 265
                  F+    C       RCRC +PC+ Q   CP +T+CA+ LV   +   T+Y  VC
Sbjct: 2427 -YGKEEFVDSQDC------GRCRCVDPCRTQ--VCPDDTKCAITLVGTEDG--TEYRGVC 2475

Query: 266  RPLYKEGECRPQPQNV--CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPA 323
            R + K G C P   N   C   C  DADC G+ KCC N CG SC  L        + +P 
Sbjct: 2476 RSVTKSGRC-PSVSNSTRCEQECLTDADCAGEMKCCNNGCGASC--LEPAVDEVLSTTPR 2532

Query: 324  YPVYTSTPY--TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI 381
             PV T+ P    P    PP      EP V A+EG +VTL+C+A G+P P  TW KG + I
Sbjct: 2533 -PVITARPVGSEPASIKPPE-----EPNVSAQEGGYVTLKCVAFGHPKPTITWRKGTMLI 2586

Query: 382  DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
              S+   ++ LDG LQI+ L R D G YVC A NG+G P+R E+ ++V
Sbjct: 2587 AASESRRRILLDGSLQIINLDRYDGGTYVCTADNGLGPPVRVEYQLVV 2634

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380025477|ref|XP_003696500.1| PREDICTED: papilin-like [Apis florea]

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 192/451 (42%), Gaps = 62/451 (13%)

Query: 13   ICLQPAVIGDCANYVLTWYYDS-NTSCFP------------------------QFIAKDI 47
            IC  P   G C N +  +YYDS N  C                          +F  +D 
Sbjct: 2062 ICYIPVDPGSCNNDITAFYYDSQNQMCQAFLYGGCEGNANRFQTEEQCERLCGKFHGQDT 2121

Query: 48   CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSS 107
            C  P   G+C  Y   +YYDS+   CR+F YGGC GN N F +   C++ C         
Sbjct: 2122 CNLPPDSGECRGYFQKYYYDSVNRICREFSYGGCEGNANRFSSMAECESVCIHHEEPVLP 2181

Query: 108  AAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFF 167
                 L +  +   P    + +  T +    +     C A      +YT   G  +R   
Sbjct: 2182 GNDTSLSSLSSCKEPVDVGSCTSGTTKRFYFDVEEQTCRAF-----IYTGCGGNRNR--- 2233

Query: 168  LRGFISANDLCF-----LESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISG 222
             + F S    C      ++ +SG  T+       +    I  P      F+    C    
Sbjct: 2234 FKTFESCISTCLSTTNEIDVDSGKDTKDPCTEAREECQTIRCP-YGKEAFVDSQDC---- 2288

Query: 223  KNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNV- 281
               RCRC +PC+ Q   C  NT+CA+ LV   +   T+Y  VCR + K G C P   N  
Sbjct: 2289 --ERCRCVDPCRTQ--ICSDNTKCAITLVATKDG--TEYKGVCRSVMKSGRC-PSVSNST 2341

Query: 282  -CADNCKDDADCTGQAKCCPNDCGYSCSN--LFDITTTTTTVSPAYPVYTSTPYTPNIPS 338
             C   C  DADC+G  KCC N CG SC      ++ +T+       PV  + P +   P 
Sbjct: 2342 RCEQECLTDADCSGDMKCCNNGCGASCLEPAAEEVISTSPRSFVTVPVVGAEPASIKQPE 2401

Query: 339  PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQI 398
                    EP V A+EG++VTL+CI +G P P  TW KG   I  S+   ++ LD  LQI
Sbjct: 2402 --------EPKVSAQEGSYVTLKCITLGNPRPKVTWRKGTTLIADSEARRRILLDDSLQI 2453

Query: 399  VGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            + L R D G YVC A NG+G P+R E+ + V
Sbjct: 2454 INLDRYDGGTYVCTADNGLGPPVRAEYQLTV 2484

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170031256|ref|XP_001843502.1| papilin [Culex quinquefasciatus] gi|167869529|gb|EDS32912.1| papilin [Culex quinquefasciatus]

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 174/396 (43%), Gaps = 51/396 (12%)

Query: 41   QFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
            ++   D+C+     G C   +  ++YDS    C  F Y GC GN N F T E CQ  C  
Sbjct: 1830 EYRGVDVCVDARDAGPCDETIPRFFYDSRTVSCHPFNYSGCEGNGNRFATIEECQTTCVK 1889

Query: 101  GTFVTSSAAPDQLENRIAVASPP-RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
                     P Q+ N +    P  R   Y +P  E          C A      +Y+   
Sbjct: 1890 QDVCM---LPPQVGNCVDGERPHYRKRWYYDPERET---------CFAF-----LYSGCT 1932

Query: 160  GEVSRKFFLRGFISANDLCF---LESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQW 216
               +R  F+  +    D C     ++E  PC +     Y D    +  P     ++    
Sbjct: 1933 AGSNRNNFV-SYDECRDFCEDIEFDNEVDPCER-----YNDECRRLHCPYGMARSY---- 1982

Query: 217  TCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGEC-R 275
                +    +C C  PC  Q  +CPS T CAVDL  +P    T ++A+CRP  K GEC R
Sbjct: 1983 ---NADNCEQCSCEEPCAQQ--RCPSGTECAVDLQSDPTDGGTVFVAICRPTSKPGECPR 2037

Query: 276  PQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPN 335
                 VC D C+ DADC    KCC   C   C            V PA P+    PY   
Sbjct: 2038 LVNATVCQDACRTDADCRNDNKCCQAGCATVC------------VPPAEPLTERPPYGVG 2085

Query: 336  IPSPPRFHNYSEPT--VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
             P+PP      E    +++EEG   TLRC A G+P P   W KGEV ++ + G + LT  
Sbjct: 2086 EPAPPVLEPVPEEELDIKSEEGGIATLRCYATGFPPPSIRWKKGEVVLNTNQGRFVLTSS 2145

Query: 394  GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            G LQIV L R D+G YVC+A NG+G+P+ +E  + V
Sbjct: 2146 GDLQIVQLHRTDSGTYVCIADNGVGEPVLREVKLQV 2181

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724570|ref|XP_003248188.1| PREDICTED: papilin-like isoform 2 [Acyrthosiphon pisum]

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 131/210 (62%), Gaps = 15/210 (7%)

Query: 227  CRCFNPCQ---NQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQP---QN 280
            CRCFNPC    +Q   CP++ +C VD++ + +  +++Y A CRP++K GEC PQ    Q+
Sbjct: 1967 CRCFNPCLPAPDQKSVCPADYQCMVDVITS-DNGDSKYKATCRPVFKPGEC-PQIAVYQS 2024

Query: 281  VCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPP 340
             CA+ C+ DADC G  KCC N CG  C      TTTTTT S    V      T    SPP
Sbjct: 2025 DCAEQCRTDADCVGDDKCCYNGCGTFCLRPQQSTTTTTTPSTTTAV------TQEKESPP 2078

Query: 341  RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVG 400
            +    ++  VEA+EGNF TLRCI +G P P   W K    IDGS GHYKL  DG LQI+G
Sbjct: 2079 QIVT-ADSNVEADEGNFATLRCIVVGTPTPTIVWQKNTTLIDGSGGHYKLFADGTLQIIG 2137

Query: 401  LVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            L + D+G+Y+C+A+NGIG+PIRKE  + VR
Sbjct: 2138 LYKYDSGVYICMASNGIGEPIRKEVYLTVR 2167

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724572|ref|XP_001951980.2| PREDICTED: papilin-like isoform 1 [Acyrthosiphon pisum]

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 131/210 (62%), Gaps = 15/210 (7%)

Query: 227  CRCFNPCQ---NQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQP---QN 280
            CRCFNPC    +Q   CP++ +C VD++ + +  +++Y A CRP++K GEC PQ    Q+
Sbjct: 2026 CRCFNPCLPAPDQKSVCPADYQCMVDVITS-DNGDSKYKATCRPVFKPGEC-PQIAVYQS 2083

Query: 281  VCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPP 340
             CA+ C+ DADC G  KCC N CG  C      TTTTTT S    V      T    SPP
Sbjct: 2084 DCAEQCRTDADCVGDDKCCYNGCGTFCLRPQQSTTTTTTPSTTTAV------TQEKESPP 2137

Query: 341  RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVG 400
            +    ++  VEA+EGNF TLRCI +G P P   W K    IDGS GHYKL  DG LQI+G
Sbjct: 2138 QIVT-ADSNVEADEGNFATLRCIVVGTPTPTIVWQKNTTLIDGSGGHYKLFADGTLQIIG 2196

Query: 401  LVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            L + D+G+Y+C+A+NGIG+PIRKE  + VR
Sbjct: 2197 LYKYDSGVYICMASNGIGEPIRKEVYLTVR 2226

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345489863|ref|XP_001601735.2| PREDICTED: papilin-like [Nasonia vitripennis]

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 191/461 (41%), Gaps = 83/461 (18%)

Query: 14   CLQPAVIGDCANYVLTWYYDSNTS-------------------------CFPQFIAKDIC 48
            CL+P   G C   +  ++YD +                              QF  +DIC
Sbjct: 1988 CLEPVEAGPCDGEITAYFYDKDAGKCQAFIYGGCEGNANRYETEEQCERLCGQFREQDIC 2047

Query: 49   LQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSA 108
              P   G C      +YYD     CR+F YGGC GN N F +   C++ C          
Sbjct: 2048 HLPVDQGPCRGSFPKFYYDQASRICREFTYGGCDGNANRFSSRNECESVCI--------- 2098

Query: 109  APDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSRKFF 167
                              ++ EPT   + GN   L  + I   P+ + + S G   R ++
Sbjct: 2099 ------------------HHEEPT---QSGNKTALSDLTICKEPVDIGSCSVGNYKRFYY 2137

Query: 168  ------LRGFI------SANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLF- 214
                   R FI      + N+   ++S    C Q  A    ++++     E T +     
Sbjct: 2138 DDEYQTCRAFIYTGCGGNRNNFKTIDSCLKVCRQINAIPDDEQDTKDPCAEATEHCHQLH 2197

Query: 215  ----QWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYK 270
                Q   V S    RCRC  PCQ+   QCP  T+CAV LV + +   T Y  +C P+ K
Sbjct: 2198 CPYGQEDYVDSQNCQRCRCNEPCQSV--QCPEGTKCAVTLVGSRDG--TAYRGICNPVTK 2253

Query: 271  EGECRPQPQNV--CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYT 328
             G+C P   N   C   C  DADC+G+ KCC +     C++  +  T     +P     +
Sbjct: 2254 PGKC-PVVSNSTRCEIECYTDADCSGEQKCCRSG---PCTSCLNPATEEVIATPPPYAPS 2309

Query: 329  STPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY 388
                 P   +P +      P V A+EG +VT+RC+ IG P P+  W K    I  ++   
Sbjct: 2310 EQEAIPPGAAPAKIEQPESPNVSAQEGGYVTMRCVVIGTPTPIIVWRKDAKIIGSNENRR 2369

Query: 389  KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            +L  DG LQI+ L   D G+YVC A NGIG P+R E+ + V
Sbjct: 2370 RLLNDGSLQIINLYPYDKGLYVCTADNGIGSPVRIEYQLDV 2410

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177741|ref|XP_003736476.1| GA17283, isoform B [Drosophila pseudoobscura pseudoobscura] gi|388859175|gb|EIM52549.1| GA17283, isoform B [Drosophila pseudoobscura pseudoobscura]

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 191/471 (40%), Gaps = 85/471 (18%)

Query: 6    LQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQF----------------------- 42
            +Q   +  C  P   G C N+ + +Y+D+N     +F                       
Sbjct: 1607 VQEPPQKACALPKETGTCGNFSVKYYFDTNYGGCARFWYGGCDGNANRFETEAECKDTCQ 1666

Query: 43   --IAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
                + +CL P  +G C  +   WY+D+   RC +F YGGC G  N F + E CQ  CA 
Sbjct: 1667 EYTGQHVCLLPKSVGPCQGFTKKWYFDTDRNRCEEFQYGGCYGTNNRFDSLEQCQGTCAV 1726

Query: 101  GTFVTSSAAPDQLENRIAVASPPRFHNYSEPTV---------EAEEGNFVTLRCIAIGYP 151
               + +   P  +EN     +  R++  ++  +         +  + N+ T    A  Y 
Sbjct: 1727 SESIPTCEQP--VENGPCAGNYERWYYDNQTDICRPFTYGGCKGNKNNYPTEH--ACSYS 1782

Query: 152  IPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPNT 211
                   KG V  +  +   I        E+E   C +    +   R +  + PE T   
Sbjct: 1783 CRQPGVLKGPVDNE--IDNEIGQGRCESFENE---CRELRCPYGVRREADRSQPECT--- 1834

Query: 212  FLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKE 271
                          +C C NPC++    CP   +CA+++     T + Q+  VCR + K 
Sbjct: 1835 --------------KCLCENPCESY--SCPEGQQCAIEIAN---TGDRQFAPVCRDINKP 1875

Query: 272  GECRPQPQNV--CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTS 329
            G C     N   CA  C  DADC G+ KCC + CGY C            V PA P    
Sbjct: 1876 GVCPGLAANASNCAQECYTDADCRGENKCCSDGCGYLC------------VQPARPTQRP 1923

Query: 330  TPYTPNIPSPPRFHNYSEPT------VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG 383
            +   P +  P       EP       V+   G    LRC A G P P  TWS   V ID 
Sbjct: 1924 STRAPTVVYPGESRAALEPKQPQELDVQTSIGGIAVLRCFATGNPAPNITWSLKNVVIDT 1983

Query: 384  SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYE 434
            + G Y LT  G L IV + + D G YVCVA+NG+G+P+R+E  + V  N +
Sbjct: 1984 NQGRYVLTSTGDLTIVQVRQTDDGTYVCVASNGLGEPVRREVALQVTVNAQ 2034

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270010741|gb|EFA07189.1| hypothetical protein TcasGA2_TC010195 [Tribolium castaneum]

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 216/522 (41%), Gaps = 119/522 (22%)

Query: 10   AKDICLQPAVIGDCANYVLTWYYDSNT----------------------SC--------- 38
            A+D+C  P V+G C +    +YY+  T                      SC         
Sbjct: 1952 AQDLCKLPPVVGPCNSEYEQFYYNERTDSCHPFNYGGCEGNYNRFPDKASCEQRCKRSPP 2011

Query: 39   ---FPQFIAKDI--------CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNN 87
               FPQ  A  +        C +    G+C + +  +++++    C  F Y GCGGN N 
Sbjct: 2012 SPQFPQTQAPPVQPPPSSAMCYEQPDAGNCTDNLSVFFFNTSSQTCTPFTYTGCGGNANR 2071

Query: 88   FMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIA 147
            F +EE C+ +C  G F         ++     A  P++  Y +  V     +F+   C  
Sbjct: 2072 FNSEEQCERQC--GRFRGQDVCTMPMDRGPCRAYTPKY--YYDRGV-GRCASFIYGGCGG 2126

Query: 148  IGYPIPVYTWSKGEVSRKFFL-----RGFISANDLCFLESESGPCTQQ-EAAWYFDR--- 198
             G       +S  E   K  +     R  +++  +C L  ++G C       WYFD    
Sbjct: 2127 NGN-----RFSSSEECEKICVTHEEDRSNVTSTAVCELPVDTGSCQDGYHKRWYFDNARG 2181

Query: 199  --------------NSF---------------ITMPELTPNTFLFQW------------- 216
                          N+F               +T P + P     Q              
Sbjct: 2182 ECIAFIFSGCGGNLNNFKTFQSCVTFCKDYLTVTQPPVGPQDHPCQAHFDECATLRCPYG 2241

Query: 217  --TCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRET-QYIAVCRPLYKEGE 273
                V   +  RC+C NPC   D  CP N++CA+D+ RN  + E   +IA+CR + K G+
Sbjct: 2242 IEAYVDDNQCNRCQCQNPCSTVD--CPPNSQCAIDINRNKTSSEDPDFIAICREINKNGQ 2299

Query: 274  C---RPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAY-PVYTS 329
            C       QN C   C++DADC    KCC   CG SC    + T     V+  Y P YT 
Sbjct: 2300 CPILGHYEQNNCEQECRNDADCPFHLKCCSTGCGTSC---IEPTVPAELVTQQYQPAYTE 2356

Query: 330  TPYTPNIPSPPRFHNYS-EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY 388
             P   +  SPP+    + EP V+   G+ VTLRC   G P P  +W K ++ IDG+   Y
Sbjct: 2357 APIQSDY-SPPKIDVQTYEPEVQGLIGDHVTLRCAVTGNPTPKISWKKDDLLIDGTQAKY 2415

Query: 389  KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE--FNVI 428
            ++ LD  LQI+ L + D+G+Y+C A N IG+PI  +   NV+
Sbjct: 2416 RIKLDQSLQIITLHKTDSGVYLCTADNSIGEPITNKIVLNVV 2457

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	615
FB|FBgn0003137	2898	Ppn "Papilin" [Drosophila mela	0.294	0.062	0.384	4.1e-48
ZFIN|ZDB-GENE-061013-323	431	spint2 "serine peptidase inhib	0.190	0.271	0.358	5.9e-29
WB|WBGene00003242	2167	mig-6 [Caenorhabditis elegans	0.183	0.052	0.375	2.8e-25
UNIPROTKB|P86733	126	P86733 "BPTI/Kunitz domain-con	0.097	0.476	0.466	2.2e-24
UNIPROTKB|E1BUM2	308	TFPI "Uncharacterized protein"	0.214	0.428	0.311	2e-22
WB|WBGene00012186	3129	mlt-11 [Caenorhabditis elegans	0.252	0.049	0.298	1.3e-19
WB|WBGene00007938	1043	C34F6.1 [Caenorhabditis elegan	0.152	0.090	0.360	2.6e-22
RGD|61914	302	Tfpi "tissue factor pathway in	0.182	0.370	0.352	4.3e-22
WB|WBGene00012814	1658	Y43F8B.3 [Caenorhabditis elega	0.082	0.030	0.372	7.2e-22
UNIPROTKB|E1BVF2	239	TFPI2 "Uncharacterized protein	0.102	0.263	0.460	9e-11

FB|FBgn0003137 Ppn "Papilin" [Drosophila melanogaster (taxid:7227)]

 Score = 330 (121.2 bits), Expect = 4.1e-48, Sum P(3) = 4.1e-48
 Identities = 80/208 (38%), Positives = 101/208 (48%)

Query:   226 RCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNV--CA 283
             +C C NPC+     CP   +CA+D V + + R  Q+  VCR +YK GEC     N   CA
Sbjct:  2416 QCICENPCEGYS--CPEGQQCAID-VASSDDR--QFAPVCRDIYKPGECPALSANASGCA 2470

Query:   284 DNCKDDADCTGQAKCCPNDCGYSCSNLFDIXXXXXXVSPAYPVYTSTPYTPNIPSPPRFH 343
               C  DADC G  KCC + CG  C            V PA P        P +  P    
Sbjct:  2471 RECYTDADCRGDNKCCSDGCGQLC------------VHPARPTQPPRTQAPVVSYPGDAR 2518

Query:   344 NYSEPTVEAEE-------GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
                EP  EA E       G    LRC A G P P  TWS   + I+ + G Y LT +G L
Sbjct:  2519 AALEPK-EAHELDVQTAIGGIAVLRCFATGNPAPNITWSLKNLVINTNKGRYVLTANGDL 2577

Query:   397 QIVGLVRQDAGIYVCVAANGIGDPIRKE 424
              IV + + D G YVCVA+NG+G+P+R+E
Sbjct:  2578 TIVQVRQTDDGTYVCVASNGLGEPVRRE 2605

GO:0005604 "basement membrane" evidence=IDA

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0005201 "extracellular matrix structural constituent" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

ZFIN|ZDB-GENE-061013-323 spint2 "serine peptidase inhibitor, Kunitz type, 2" [Danio rerio (taxid:7955)]

 Score = 242 (90.2 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
 Identities = 43/120 (35%), Positives = 66/120 (55%)

Query:   430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP 489
             R + +++YY+     CQ F YGGC GN N +  + SC   C   I P +  + P     P
Sbjct:   238 RASIKRFYYNNGV--CQQFIYGGCGGNKNNYESEDSCMTACTVKIIPKEQ-EGPVIPAIP 294

Query:   490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             +   +  + C + S+SGPC      ++F+ ++  CQ FIYGGC GN NR+ +EE+C  +C
Sbjct:   295 KSAHSFEEKCVVPSDSGPCRASFRMFFFEASSQSCQPFIYGGCRGNLNRYGSEEECMSVC 354

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

WB|WBGene00003242 mig-6 [Caenorhabditis elegans (taxid:6239)]

 Score = 238 (88.8 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
 Identities = 45/120 (37%), Positives = 64/120 (53%)

Query:   430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP 489
             +G ++ WYY+  T SC  F+Y GC GN NRF  +  C+  CV+   P   A +     A 
Sbjct:  1385 KGAFDSWYYEVATGSCVTFKYTGCGGNANRFASKDQCESLCVK---PASEAASAGIDGA- 1440

Query:   490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
                A  N +C    ++GPCT     WY+++    C  F YGGC+G  NRF+ E+QC+  C
Sbjct:  1441 ---AGINSVCDEAKDTGPCTNFVTKWYYNKADGTCNRFHYGGCQGTNNRFDNEQQCKAAC 1497

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0031012 "extracellular matrix" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0048598 "embryonic morphogenesis" evidence=IMP

GO:0032504 "multicellular organism reproduction" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

UNIPROTKB|P86733 P86733 "BPTI/Kunitz domain-containing protein" [Haliotis asinina (taxid:109174)]

 Score = 168 (64.2 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:   490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             R+     DLC L  +SGPC      W++++ T RCQ F YGGCEGNAN F T ++C   C
Sbjct:    61 RRRCGGGDLCSLPRDSGPCEAAIPRWWYNKRTNRCQRFTYGGCEGNANNFKTLDECRFQC 120

GO:0005576 "extracellular region" evidence=IDA

UNIPROTKB|E1BUM2 TFPI "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 207 (77.9 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
 Identities = 47/151 (31%), Positives = 75/151 (49%)

Query:   428 IVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIP--PPDPAQTPST 485
             I RG + +++Y+++T  C+ F+YGGC GN N F     CQ  C  N+   P  P +  S 
Sbjct:   132 ICRGFFSRYFYNKETKICEIFKYGGCLGNQNNFKSLEECQTTCQGNLNLLPTAPNEEESH 191

Query:   486 TLAPR--QEAARN-----------DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGC 532
             T+     +E  +             LC    + G C  +E  ++++ +T RC+ F Y GC
Sbjct:   192 TVNSSYLEEEYKQFPSSFEPPPIPSLCMTPMDRGLCRAKETRFFYNYSTGRCRPFTYSGC 251

Query:   533 EGNANRFNTEEQCERLC--GEFRAEDPVGQR 561
              GN N F + + C R+C  G  + +D  G+R
Sbjct:   252 GGNENNFTSRKSCLRICRKGFIKKKD--GRR 280

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

WB|WBGene00012186 mlt-11 [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
 Identities = 52/174 (29%), Positives = 78/174 (44%)

Query:   430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP 489
             RG + +W++D +  +C  F Y GCQGN N F  +  C   C +  P P P+ TP  +   
Sbjct:   747 RGQFVRWFFDDEKKNCDVFTYTGCQGNGNNFASKEECMAICHK--PEPTPSATPDFS--- 801

Query:   490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
               +   ND+     ++G C      + FD     C++F YGGC GN N F T ++C   C
Sbjct:   802 --QVCSNDV-----DAGECNGVFERFAFDAEAQDCRAFTYGGCGGNGNNFATMQECRSRC 854

Query:   550 GEFRAEDPVGQRPAAVIGEDPTSESNGTTTRIGNSAVNSTMEAVRAITTGSIPG 603
                  + PV    A +       E  G  +R    A + ++ A R+ T G   G
Sbjct:   855 VMAMKKSPVATCEADI----EVGECAGVFSRF---AFDKSINACRSFTYGGCGG 901

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

WB|WBGene00007938 C34F6.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 148 (57.2 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
 Identities = 35/97 (36%), Positives = 46/97 (47%)

Query:    21 GDCA--NYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYY 78
             G C   +Y  T    S T+C P   ++D C Q    G+    V  WY+D+    CR+F Y
Sbjct:   210 GGCPEDHYCHTGASFSTTACCPLVSSEDRCAQRRDTGEGDELVARWYFDNQAKECRRFLY 269

Query:    79 GGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLEN 115
              G  GN NNF+T+  C   C   T VT  A P +  N
Sbjct:   270 KGIRGNANNFVTKAQCVDACETET-VTDEANPCKFSN 305

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0045132 "meiotic chromosome segregation" evidence=IMP

RGD|61914 Tfpi "tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)" [Rattus norvegicus (taxid:10116)]

 Score = 229 (85.7 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
 Identities = 44/125 (35%), Positives = 67/125 (53%)

Query:   436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAAR 495
             +Y++ ++  C+ F YGGC+GN NRF+    C+K C+       P     TT+     A +
Sbjct:    69 YYFNMNSHQCEEFIYGGCRGNKNRFDTLEECRKTCI-------PGYK-KTTIKTTSGAEK 120

Query:   496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAE 555
              D CFLE + G C      ++++  + +C+ F YGGC GN+N F T E+C   C     E
Sbjct:   121 PDFCFLEEDPGICRGFMTRYFYNNQSKQCEQFKYGGCLGNSNNFETLEECRNTC-----E 175

Query:   556 DPVGQ 560
             DPV +
Sbjct:   176 DPVNE 180

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA;ISO

GO:0007596 "blood coagulation" evidence=IEA

GO:0030414 "peptidase inhibitor activity" evidence=TAS

WB|WBGene00012814 Y43F8B.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 142 (55.0 bits), Expect = 7.2e-22, Sum P(4) = 7.2e-22
 Identities = 19/51 (37%), Positives = 34/51 (66%)

Query:   499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             C + ++ GPC ++   W +D+ +  C+ FI+GGC+GN N F+T ++C  +C
Sbjct:  1602 CLVRADPGPCNREIPRWAYDKASGSCKKFIFGGCQGNLNNFDTVQKCTEIC 1652

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

UNIPROTKB|E1BVF2 TFPI2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 169 (64.5 bits), Expect = 9.0e-11, P = 9.0e-11
 Identities = 29/63 (46%), Positives = 35/63 (55%)

Query:   487 LAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCE 546
             LAPR    +   C L  + GPC      WY+DR T  CQ F YGGC GNAN F + + CE
Sbjct:    21 LAPRGLTEKQRACLLPPDDGPCRALVPRWYYDRYTQSCQEFSYGGCHGNANNFLSHDDCE 80

Query:   547 RLC 549
             + C
Sbjct:    81 KNC 83

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	615
cd00109	54	cd00109, KU, BPTI/Kunitz family of serine protease	6e-18
cd00109	54	cd00109, KU, BPTI/Kunitz family of serine protease	4e-17
pfam00014	53	pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic t	7e-17
smart00131	53	smart00131, KU, BPTI/Kunitz family of serine prote	7e-17
smart00131	53	smart00131, KU, BPTI/Kunitz family of serine prote	1e-16
pfam00014	53	pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic t	1e-15
smart00410	85	smart00410, IG_like, Immunoglobulin like	2e-12
smart00409	85	smart00409, IG, Immunoglobulin	2e-12
cd00109	54	cd00109, KU, BPTI/Kunitz family of serine protease	2e-11
smart00131	53	smart00131, KU, BPTI/Kunitz family of serine prote	6e-11
pfam00014	53	pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic t	2e-10
smart00408	63	smart00408, IGc2, Immunoglobulin C-2 Type	3e-10
pfam07679	90	pfam07679, I-set, Immunoglobulin I-set domain	1e-09
cd00096	74	cd00096, Ig, Immunoglobulin domain	1e-08
cd04968	88	cd04968, Ig3_Contactin_like, Third Ig domain of co	2e-07
cd05724	86	cd05724, Ig2_Robo, Second immunoglobulin (Ig)-like	2e-07
cd05723	71	cd05723, Ig4_Neogenin, Fourth immunoglobulin (Ig)-	7e-07
cd04967	91	cd04967, Ig1_Contactin, First Ig domain of contact	2e-06
pfam13895	80	pfam13895, Ig_2, Immunoglobulin domain	3e-06
cd05732	96	cd05732, Ig5_NCAM-1_like, Fifth immunoglobulin (Ig	3e-06
cd05731	71	cd05731, Ig3_L1-CAM_like, Third immunoglobulin (Ig	3e-06
cd05849	93	cd05849, Ig1_Contactin-1, First Ig domain of conta	5e-06
pfam00095	43	pfam00095, WAP, WAP-type (Whey Acidic Protein) 'fo	5e-06
cd05745	74	cd05745, Ig3_Peroxidasin, Third immunoglobulin (Ig	6e-06
cd05851	88	cd05851, Ig3_Contactin-1, Third Ig domain of conta	1e-05
cd05746	69	cd05746, Ig4_Peroxidasin, Fourth immunoglobulin (I	2e-05
cd05738	74	cd05738, Ig2_RPTP_IIa_LAR_like, Second immunoglobu	3e-05
cd05734	79	cd05734, Ig7_DSCAM, Seventh immunoglobulin (Ig)-li	3e-05
cd05852	73	cd05852, Ig5_Contactin-1, Fifth Ig domain of conta	4e-05
pfam13927	74	pfam13927, Ig_3, Immunoglobulin domain	4e-05
cd05730	95	cd05730, Ig3_NCAM-1_like, Third immunoglobulin (Ig	6e-05
cd04969	73	cd04969, Ig5_Contactin_like, Fifth Ig domain of co	8e-05
cd05729	85	cd05729, Ig2_FGFR_like, Second immunoglobulin (Ig)	1e-04
cd05725	69	cd05725, Ig3_Robo, Third immunoglobulin (Ig)-like	1e-04
cd05876	71	cd05876, Ig3_L1-CAM, Third immunoglobulin (Ig)-lik	3e-04
cd05869	97	cd05869, Ig5_NCAM-1, Fifth immunoglobulin (Ig)-lik	3e-04
pfam00047	62	pfam00047, ig, Immunoglobulin domain	3e-04
smart00217	47	smart00217, WAP, Four-disulfide core domains	4e-04
cd05764	74	cd05764, Ig_2, Subgroup of the immunoglobulin (Ig)	4e-04
cd00199	60	cd00199, WAP, whey acidic protein-type four-disulf	4e-04
cd07693	100	cd07693, Ig1_Robo, First immunoglobulin (Ig)-like	5e-04
cd05848	94	cd05848, Ig1_Contactin-5, First Ig domain of conta	0.002
cd04978	76	cd04978, Ig4_L1-NrCAM_like, Fourth immunoglobulin	0.003
cd05728	85	cd05728, Ig4_Contactin-2-like, Fourth Ig domain of	0.003

>gnl|CDD|238057 cd00109, KU, BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold

 Score = 77.3 bits (191), Expect = 6e-18
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           D+C L  ++GPC      +Y+D  T +C+ F YGGC GNAN F T+E+CER CG
Sbjct: 1   DVCSLPPDTGPCKAYIPRYYYDATTKQCEPFTYGGCGGNANNFATKEECERTCG 54

BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Length = 54

>gnl|CDD|238057 cd00109, KU, BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold

 Score = 75.0 bits (185), Expect = 4e-17
 Identities = 25/53 (47%), Positives = 32/53 (60%)

Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          D+C  P   G C  Y+  +YYD+   +C  F YGGCGGN NNF T+E C+  C
Sbjct: 1  DVCSLPPDTGPCKAYIPRYYYDATTKQCEPFTYGGCGGNANNFATKEECERTC 53

BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Length = 54

>gnl|CDD|200929 pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic trypsin inhibitor domain

 Score = 74.3 bits (183), Expect = 7e-17
 Identities = 24/53 (45%), Positives = 33/53 (62%)

Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
            C L  + GPC      WY++ +T +C+ FIYGGC GNAN F + E+CE+ C 
Sbjct: 1   FCLLPPDPGPCRGSIPRWYYNPSTGQCEPFIYGGCGGNANNFESLEECEKACR 53

Indicative of a protease inhibitor, usually a serine protease inhibitor. Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Certain family members are similar to the tick anticoagulant peptide (TAP). This is a highly selective inhibitor of factor Xa in the blood coagulation pathways. TAP molecules are highly dipolar, and are arranged to form a twisted two- stranded antiparallel beta-sheet followed by an alpha helix. Length = 53

>gnl|CDD|197529 smart00131, KU, BPTI/Kunitz family of serine protease inhibitors

 Score = 74.2 bits (183), Expect = 7e-17
 Identities = 24/53 (45%), Positives = 29/53 (54%)

Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          D+CL P   G C   +  +YYD     C  F YGGCGGN NNF + E C+  C
Sbjct: 1  DVCLLPPDTGPCGGSIPRYYYDPETGTCEPFTYGGCGGNANNFESLEECERTC 53

Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein. Length = 53

>gnl|CDD|197529 smart00131, KU, BPTI/Kunitz family of serine protease inhibitors

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 25/53 (47%), Positives = 33/53 (62%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           D+C L  ++GPC      +Y+D  T  C+ F YGGC GNAN F + E+CER C
Sbjct: 1   DVCLLPPDTGPCGGSIPRYYYDPETGTCEPFTYGGCGGNANNFESLEECERTC 53

Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein. Length = 53

>gnl|CDD|200929 pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic trypsin inhibitor domain

 Score = 71.2 bits (175), Expect = 1e-15
 Identities = 23/52 (44%), Positives = 28/52 (53%)

Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
           CL P   G C   +  WYY+    +C  F YGGCGGN NNF + E C+  C
Sbjct: 1  FCLLPPDPGPCRGSIPRWYYNPSTGQCEPFIYGGCGGNANNFESLEECEKAC 52

Indicative of a protease inhibitor, usually a serine protease inhibitor. Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Certain family members are similar to the tick anticoagulant peptide (TAP). This is a highly selective inhibitor of factor Xa in the blood coagulation pathways. TAP molecules are highly dipolar, and are arranged to form a twisted two- stranded antiparallel beta-sheet followed by an alpha helix. Length = 53

>gnl|CDD|214653 smart00410, IG_like, Immunoglobulin like

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQ 404
           P+V  +EG  VTL C A G P P  TW K    +    G + ++  G    L I  +  +
Sbjct: 2   PSVTVKEGESVTLSCEASGSPPPEVTWYKQGGKLLAESGRFSVSRSGSTSTLTISNVTPE 61

Query: 405 DAGIYVCVAANGIGDPIRKEFNVIV 429
           D+G Y C A N  G        + V
Sbjct: 62  DSGTYTCAATNSSGS-ASSGTTLTV 85

IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG. Length = 85

>gnl|CDD|214652 smart00409, IG, Immunoglobulin

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQ 404
           P+V  +EG  VTL C A G P P  TW K    +    G + ++  G    L I  +  +
Sbjct: 2   PSVTVKEGESVTLSCEASGSPPPEVTWYKQGGKLLAESGRFSVSRSGSTSTLTISNVTPE 61

Query: 405 DAGIYVCVAANGIGDPIRKEFNVIV 429
           D+G Y C A N  G        + V
Sbjct: 62  DSGTYTCAATNSSGS-ASSGTTLTV 85

Length = 85

>gnl|CDD|238057 cd00109, KU, BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           +    ++YYD  T  C+PF YGGC GN N F  +  C++ C 
Sbjct: 13  KAYIPRYYYDATTKQCEPFTYGGCGGNANNFATKEECERTCG 54

BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Length = 54

>gnl|CDD|197529 smart00131, KU, BPTI/Kunitz family of serine protease inhibitors

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
            G+  ++YYD +T +C+PF YGGC GN N F     C++ C
Sbjct: 13  GGSIPRYYYDPETGTCEPFTYGGCGGNANNFESLEECERTC 53

Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein. Length = 53

>gnl|CDD|200929 pfam00014, Kunitz_BPTI, Kunitz/Bovine pancreatic trypsin inhibitor domain

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           RG+  +WYY+  T  C+PF YGGC GN N F     C+K C 
Sbjct: 12  RGSIPRWYYNPSTGQCEPFIYGGCGGNANNFESLEECEKACR 53

Indicative of a protease inhibitor, usually a serine protease inhibitor. Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Certain family members are similar to the tick anticoagulant peptide (TAP). This is a highly selective inhibitor of factor Xa in the blood coagulation pathways. TAP molecules are highly dipolar, and are arranged to form a twisted two- stranded antiparallel beta-sheet followed by an alpha helix. Length = 53

>gnl|CDD|197706 smart00408, IGc2, Immunoglobulin C-2 Type

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
           EG  VTL C A G P+P  TW K    +  S+          L I  +  +D+G+Y CVA
Sbjct: 1   EGQSVTLTCPAEGNPVPNITWLKDGKPLPESNRFV--ASGSTLTIKSVSLEDSGLYTCVA 58

Query: 414 ANGIG 418
            N  G
Sbjct: 59  ENSAG 63

Length = 63

>gnl|CDD|191810 pfam07679, I-set, Immunoglobulin I-set domain

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDA 406
           VE +EG      C   G P P  +W K    +  S   +K+T +G    L I  +   D 
Sbjct: 10  VEVQEGESARFTCTVTGDPDPTVSWFKDGQPL-RSSDRFKVTYEGGTYTLTISNVQPDDE 68

Query: 407 GIYVCVAANGIGDPIRKEFNVIV 429
           G Y CVA N  G+       + V
Sbjct: 69  GKYTCVATNSAGE-AEASAELTV 90

Length = 90

>gnl|CDD|143165 cd00096, Ig, Immunoglobulin domain

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL------TLDGVLQIVGLVRQDAGIYVC 411
           VTL C+A G P P  TW K    +  S            +    L I  +  +D+G Y C
Sbjct: 1   VTLTCLASGPPPPTITWLKNGKPLPSSVLTRVRSSRGTSSGSSTLTISNVTLEDSGTYTC 60

Query: 412 VAANGIG 418
           VA+N  G
Sbjct: 61  VASNSAG 67

Ig: immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of this group are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as, T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as, butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond. Length = 74

>gnl|CDD|143169 cd04968, Ig3_Contactin_like, Third Ig domain of contactin

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--DGVLQIVGLVRQDA 406
              A +G  VTL C A+G P+P   W K    +DGS            VL+I  +  +D 
Sbjct: 10  DTYALKGQNVTLECFALGNPVPQIKWRK----VDGSMPSSAEISMSGAVLKIPNIQFEDE 65

Query: 407 GIYVCVAAN 415
           G Y C A N
Sbjct: 66  GTYECEAEN 74

Ig3_Contactin_like: Third Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnatal, and a lack of contactin-5 (NB-2) results in an impairment of neuronal act ivity in the rat auditory system. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 88

>gnl|CDD|143201 cd05724, Ig2_Robo, Second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 347 EP-TVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ 404
           EP   +   G    L C    G+P P  +W K    ++  +   ++  DG L I    + 
Sbjct: 2   EPSDTQVAVGEMAVLECSPPRGHPEPTVSWRKDGQPLNLDNERVRIVDDGNLLIAEARKS 61

Query: 405 DAGIYVCVAANGIG 418
           D G Y CVA N +G
Sbjct: 62  DEGTYKCVATNMVG 75

Ig2_Robo: domain similar to the second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagonizes slit responsiveness in precrossing axons. The Slit-Robo interaction is mediated by the second leucine-rich repeat (LRR) domain of Slit and the two N-terminal Ig domains of Robo, Ig1 and Ig2. The primary Robo binding site for Slit2 has been shown by surface plasmon resonance experiments and mutational analysis to be is the Ig1 domain, while the Ig2 domain has been proposed to harbor a weak secondary binding site. Length = 86

>gnl|CDD|212460 cd05723, Ig4_Neogenin, Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

 Score = 46.5 bits (110), Expect = 7e-07
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
           +   C   G P P   W K    +  SD ++K+  +  LQ++GLV+ D G Y C+A N +
Sbjct: 2   IVFECEVTGKPTPTVKWVKNGDMVIPSD-YFKIVKEHNLQVLGLVKSDEGFYQCIAENDV 60

Query: 418 GD 419
           G+
Sbjct: 61  GN 62

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain. Length = 71

>gnl|CDD|143168 cd04967, Ig1_Contactin, First Ig domain of contactin

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVR-QDAGI 408
           E++EG  V+L C A G P P Y W      ID   D  Y L + G L I    + +DAG 
Sbjct: 16  ESDEGK-VSLNCRARGSPPPTYRWLMNGTEIDDEPDSRYSL-VGGNLVISNPSKAKDAGR 73

Query: 409 YVCVAANGIG 418
           Y C+A+N +G
Sbjct: 74  YQCLASNIVG 83

Ig1_Contactin: First Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnatal, and a lack of contactin-5 (NB-2) results in an impairment of neuronal activity in the rat auditory system. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 91

>gnl|CDD|206066 pfam13895, Ig_2, Immunoglobulin domain

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-DGSDGHYKLTLDGVLQIVGLVRQDA 406
                 EG  VTL C A G P P YTW K  V +    +G +            +  +D+
Sbjct: 7   SPTVVFEGEDVTLTCSAPGNPPPNYTWYKDGVPLSSSQNGFFTPN---------VSAEDS 57

Query: 407 GIYVCVAANGIGDPIRKEFNVIV 429
           G Y CVA+NG G        + V
Sbjct: 58  GTYTCVASNGGGGKTSNPVTLTV 80

This domain contains immunoglobulin-like domains. Length = 80

>gnl|CDD|143209 cd05732, Ig5_NCAM-1_like, Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM) and similar proteins

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 13/77 (16%)

Query: 352 AEEGNFVTLRCIAIGYPIPVYTW-------SKGEVSIDGS---DGHYKLTLDGVLQIVGL 401
           A E   +TL C A G PIP  TW       S+G+ S+DG     GH +++    L +  +
Sbjct: 13  AVELEQITLTCEAEGDPIPEITWRRATRNFSEGDKSLDGRIVVRGHARVS---SLTLKDV 69

Query: 402 VRQDAGIYVCVAANGIG 418
              DAG Y C A+N IG
Sbjct: 70  QLTDAGRYDCEASNRIG 86

Ig5_NCAM-1 like: domain similar to the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans interactions), through binding to the Ig1 and Ig2 domains. The adhesive ability of NCAM is modulated by the addition of polysialic acid chains to the fifth Ig-like domain. Also included in this group is NCAM-2 (also known as OCAM/mamFas II and RNCAM) NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE). Length = 96

>gnl|CDD|143208 cd05731, Ig3_L1-CAM_like, Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 358 VTLRCIAIGYPIPVYTWSK--GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
           + L CIA G P P  +W K  GE+    +D       +  L+I  +  +D G Y C A+N
Sbjct: 1   LLLECIAEGLPTPEISWIKIGGELP---ADRTKFENFNKTLKIDNVSEEDDGEYRCTASN 57

Query: 416 GIGDPIRKEFNVIVR 430
            +G   R   +V V 
Sbjct: 58  SLGS-ARHTISVTVE 71

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin. Length = 71

>gnl|CDD|143257 cd05849, Ig1_Contactin-1, First Ig domain of contactin-1

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ-DAGIY 409
           E+ EG  V++ C A   P P+Y W K  + ID ++  Y + + G L I    +  DAG Y
Sbjct: 16  ESTEGK-VSVNCRARANPFPIYKWRKNNLDIDLTNDRYSM-VGGNLVINNPDKYKDAGRY 73

Query: 410 VCVAANGIG 418
           VC+ +N  G
Sbjct: 74  VCIVSNIYG 82

Ig1_Contactin-1: First Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 93

>gnl|CDD|215714 pfam00095, WAP, WAP-type (Whey Acidic Protein) 'four-disulfide core'

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 270 KEGEC--RPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSN 309
           K G C   P     C   C  D+DC G  KCC N CG SC +
Sbjct: 1   KPGSCPSPPPDVGECLPECSSDSDCPGGKKCCFNGCGRSCVD 42

Length = 43

>gnl|CDD|143222 cd05745, Ig3_Peroxidasin, Third immunoglobulin (Ig)-like domain of peroxidasin

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
           EG  V   C A GYP PV  W+KG   +     H  L+  G L+I  +   D G Y C A
Sbjct: 1   EGQTVDFLCEAQGYPQPVIAWTKGGSQLSVDRRHLVLS-SGTLRISRVALHDQGQYECQA 59

Query: 414 ANGIG 418
            N +G
Sbjct: 60  VNIVG 64

Ig3_Peroxidasin: the third immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells which have undergone programmed cell death, and protection of the organism against non-self. Length = 74

>gnl|CDD|143259 cd05851, Ig3_Contactin-1, Third Ig domain of contactin-1

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 18/74 (24%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSK--------GEVSIDGSDGHYKLTLDGVLQIVGL 401
             A +G  VTL C A+G P+PV  W K         E+S+ G+          VL+I  +
Sbjct: 11  TYALKGQNVTLECFALGNPVPVIRWRKILEPMPATAEISMSGA----------VLKIFNI 60

Query: 402 VRQDAGIYVCVAAN 415
             +D G Y C A N
Sbjct: 61  QPEDEGTYECEAEN 74

Ig3_Contactin-1: Third Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 88

>gnl|CDD|143223 cd05746, Ig4_Peroxidasin, Fourth immunoglobulin (Ig)-like domain of peroxidasin

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
           V + C A G P P  TW+K  V +  S G + ++ +G L I  +   D G Y CVA N I
Sbjct: 1   VQIPCSAQGDPEPTITWNKDGVQVTES-GKFHISPEGYLAIRDVGVADQGRYECVARNTI 59

Query: 418 G 418
           G
Sbjct: 60  G 60

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self. Length = 69

>gnl|CDD|143215 cd05738, Ig2_RPTP_IIa_LAR_like, Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 359 TLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
           T+ C A G P P  TW K  + +D  S+G  K    G LQI      D G Y CVA N  
Sbjct: 2   TMLCAASGNPDPEITWFKDFLPVDTTSNGRIKQLRSGALQIENSEESDQGKYECVATNSA 61

Query: 418 GDPIRKEFNVIVR 430
           G       N+ VR
Sbjct: 62  GTRYSAPANLYVR 74

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Length = 74

>gnl|CDD|143211 cd05734, Ig7_DSCAM, Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 358 VTLRCIAIGYPIPVYTW--SKG-----EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
           VTL C A GYP P   W  SKG             G  +L  +G L I  ++ +D+G Y+
Sbjct: 1   VTLNCSAEGYPPPTIVWKHSKGRGHPQHTHTCCLAGRIQLLSNGSLLIKHVLEEDSGYYL 60

Query: 411 CVAANGIGDPIRK 423
           C  +N +G    K
Sbjct: 61  CKVSNDVGADASK 73

Ig7_DSCAM: the seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion. Length = 79

>gnl|CDD|143260 cd05852, Ig5_Contactin-1, Fifth Ig domain of contactin-1

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 355 GNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
           G  V + C     P P ++WSKG E+ ++ S     +  DG L+I+ + + D G Y C A
Sbjct: 1   GGRVIIECKPKAAPKPKFSWSKGTELLVNNSRIS--IWDDGSLEILNITKLDEGSYTCFA 58

Query: 414 ANGIG 418
            N  G
Sbjct: 59  ENNRG 63

Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 73

>gnl|CDD|222457 pfam13927, Ig_3, Immunoglobulin domain

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQ 397
            P       P+V +  G  VTL C A G P P   +W +      GS G    +    L 
Sbjct: 1   KPVITVSPSPSVTSGGG--VTLTCSAEGGPPPPTISWYRNGSISGGSGGLG--SSGSTLT 56

Query: 398 IVGLVRQDAGIYVCVAAN 415
           +  +  +D+G Y CVA+N
Sbjct: 57  LSSVTSEDSGTYTCVASN 74

This family contains immunoglobulin-like domains. Length = 74

>gnl|CDD|143207 cd05730, Ig3_NCAM-1_like, Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-LQIVGLVRQ 404
           SE    A  G  VTL C A G+P P  TW+K    I+  +  Y    DG  + I+ + + 
Sbjct: 9   SEVNATANLGQSVTLACDADGFPEPTMTWTKDGEPIESGEEKYSFNEDGSEMTILDVDKL 68

Query: 405 DAGIYVCVAANGIGD 419
           D   Y C+A N  G+
Sbjct: 69  DEAEYTCIAENKAGE 83

Ig3_NCAM-1_like: domain similar to the third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1,and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans interactions), through binding to the Ig1 and Ig2 domains. The adhesive ability of NCAM is modulated by the addition of polysialic acid chains to the fifth Ig-like domain. Length = 95

>gnl|CDD|143170 cd04969, Ig5_Contactin_like, Fifth Ig domain of contactin

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 358 VTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
           V + C     P P  +WSKG E+  + S     +  DG L+I+ + + D G Y C A N 
Sbjct: 4   VIIECKPKAAPKPTISWSKGTELLTNSSRIC--IWPDGSLEILNVTKSDEGKYTCFAENF 61

Query: 417 IG 418
            G
Sbjct: 62  FG 63

Ig5_Contactin_like: Fifth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnatal, and a lack of contactin-5 (NB-2) results in an impairment of neuronal act ivity in the rat auditory system. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 73

>gnl|CDD|143206 cd05729, Ig2_FGFR_like, Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor and similar proteins

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 355 GNFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVC 411
           G+ V L+C A G P P  TW K       +   G YK+      L +  +V  D+G Y C
Sbjct: 9   GSTVRLKCPASGNPRPTITWLKDGKPFKKEHRIGGYKVRKKKWTLILESVVPSDSGKYTC 68

Query: 412 VAANGIG 418
           +  N  G
Sbjct: 69  IVENKYG 75

Ig2_FGFR_like: domain similar to the second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three Ig-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans. This group also contains fibroblast growth factor (FGF) receptor_like-1(FGFRL1). FGFRL1 does not have a protein tyrosine kinase domain at its C terminus; neither does its cytoplasmic domain appear to interact with a signaling partner. It has been suggested that FGFRL1 may not have any direct signaling function, but instead acts as a decoy receptor trapping FGFs and preventing them from binding other receptors. Length = 85

>gnl|CDD|143202 cd05725, Ig3_Robo, Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
           V  +C   G P+P   W K +  +    G  ++  D  L+I  +   D G Y C A N +
Sbjct: 1   VEFQCEVGGDPVPTVLWRKEDGEL--PKGRAEILDDKSLKIRNVTAGDEGSYTCEAENMV 58

Query: 418 G 418
           G
Sbjct: 59  G 59

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagonizes slit responsiveness in precrossing axons. The Slit-Robo interaction is mediated by the second leucine-rich repeat (LRR) domain of Slit and the two N-terminal Ig domains of Robo, Ig1 and Ig2. The primary Robo binding site for Slit2 has been shown by surface plasmon resonance experiments and mutational analysis to be is the Ig1 domain, while the Ig2 domain has been proposed to harbor a weak secondary binding site. Length = 69

>gnl|CDD|143284 cd05876, Ig3_L1-CAM, Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
           + L CIA G P P   W + +  +  +     L  +  LQ+  ++  D G YVC A N  
Sbjct: 1   LVLECIAEGLPTPEVHWDRIDGPLSPNRTKK-LNNNKTLQLDNVLESDDGEYVCTAENSE 59

Query: 418 G 418
           G
Sbjct: 60  G 60

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM. Length = 71

>gnl|CDD|143277 cd05869, Ig5_NCAM-1, Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 15/85 (17%)

Query: 345 YSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVR- 403
           Y E     E    +TL C A G PIP  TW     +I   +     TLDG + +    R 
Sbjct: 7   YVENQTAMELEEQITLTCEASGDPIPSITWRTSTRNISSEEK----TLDGHIVVRSHARV 62

Query: 404 ----------QDAGIYVCVAANGIG 418
                      DAG Y+C A+N IG
Sbjct: 63  SSLTLKYIQYTDAGEYLCTASNTIG 87

Ig5_NCAM-1: The fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM) and heterophilic (NCAM-non-NCAM) interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans interactions), through binding to the Ig1 and Ig2 domains. The adhesive ability of NCAM is modulated by the addition of polysialic acid chains to the fifth Ig-like domain. Length = 97

>gnl|CDD|215677 pfam00047, ig, Immunoglobulin domain

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 355 GNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDG--HYKLTLDGVLQIVGLVRQDAGIYVC 411
           G+ VTL C   G P    TW K G+   + +             L I  +  +D+G Y C
Sbjct: 1   GSSVTLTCSVSGPPQVDVTWFKEGKGLEESTTVGTDENRVSSITLTISNVTPEDSGTYTC 60

Query: 412 VA 413
           V 
Sbjct: 61  VV 62

Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain. Length = 62

>gnl|CDD|197580 smart00217, WAP, Four-disulfide core domains

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 5/43 (11%)

Query: 270 KEGECRPQPQNVCA-----DNCKDDADCTGQAKCCPNDCGYSC 307
           K G C       C      + C  D+ C G  KCC N CG SC
Sbjct: 1   KPGSCPWPTIASCPLGNPPNKCSSDSQCPGVKKCCFNGCGKSC 43

Length = 47

>gnl|CDD|143241 cd05764, Ig_2, Subgroup of the immunoglobulin (Ig) superfamily

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 19/65 (29%), Positives = 30/65 (46%)

Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
           G   TLRC A G P P   W   +  +  +     +  +G L I+    +D G + C+A+
Sbjct: 1   GQRATLRCKARGDPEPAIHWISPDGKLISNSSRTLVYDNGTLDILITTVKDTGSFTCIAS 60

Query: 415 NGIGD 419
           N  G+
Sbjct: 61  NAAGE 65

Ig_2: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond. Length = 74

>gnl|CDD|238120 cd00199, WAP, whey acidic protein-type four-disulfide core domains

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 266 RPLYKEGEC---RPQPQNVCADNCKDDADCTGQAKCCPNDCGYSC 307
           RP+ K G C    P    +  + C  D+DC G  KCC N CG SC
Sbjct: 12  RPVEKPGRCPMVNPPSLGIPPNRCSSDSDCPGDKKCCENGCGKSC 56

Members of the family include whey acidic protein, elafin (elastase-specific inhibitor), caltrin-like protein (a calcium transport inhibitor) and other extracellular proteinase inhibitors. A group of proteins containing 8 characteristically-spaced cysteine residuesforming disulphide bonds, have been termed '4-disulphide core' proteins. Protease inhibition occurs by insertion of the inhibitory loop into the active site pocket and interference with the catalytic residues of the protease. Length = 60

>gnl|CDD|143317 cd07693, Ig1_Robo, First immunoglobulin (Ig)-like domain in Robo (roundabout) receptors and similar proteins

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 12/90 (13%)

Query: 339 PPRF-HNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----EVSIDGSDGHYKLTLD 393
           PPR   + S+  V   +G+  TL C A G P P   W K     E   D    H  +   
Sbjct: 1   PPRIVEHPSDLIVS--KGDPATLNCKAEGRPTPTIQWLKNGQPLETDKDDPRSHRIVLPS 58

Query: 394 G---VLQIVG--LVRQDAGIYVCVAANGIG 418
           G    L++V     R D G+YVCVA N +G
Sbjct: 59  GSLFFLRVVHGRKGRSDEGVYVCVAHNSLG 88

Ig1_Robo: domain similar to the first immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagonizes slit responsiveness in precrossing axons. The Slit-Robo interaction is mediated by the second leucine-rich repeat (LRR) domain of Slit and the two N-terminal Ig domains of Robo, Ig1 and Ig2. The primary Robo binding site for Slit2 has been shown by surface plasmon resonance experiments and mutational analysis to be is the Ig1 domain, while the Ig2 domain has been proposed to harbor a weak secondary binding site. Length = 100

>gnl|CDD|143256 cd05848, Ig1_Contactin-5, First Ig domain of contactin-5

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVR-QDAGIYVCVAAN 415
           V L C A G P+P Y W +    ID  SD  Y L +DG L I      +D+G Y C+A N
Sbjct: 22  VILNCEARGNPVPTYRWLRNGTEIDTESDYRYSL-IDGNLIISNPSEVKDSGRYQCLATN 80

Query: 416 GIGDPIRKE 424
            IG  + +E
Sbjct: 81  SIGSILSRE 89

Ig1_Contactin-5: First Ig domain of the neural cell adhesion molecule contactin-5. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains, anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. In rats, a lack of contactin-5 (NB-2) results in an impairment of the neuronal activity in the auditory system. Contactin-5 is expressed specifically in the postnatal nervous system, peaking at about 3 weeks postnatal. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala; lower levels of expression have been detected in the corpus callosum, caudate nucleus, and spinal cord. Length = 94

>gnl|CDD|143179 cd04978, Ig4_L1-NrCAM_like, Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVCVA 413
           G    L C A G P P  TW    V I+      +  +DG  L +  +   D  +Y C A
Sbjct: 1   GETGRLDCEAEGIPQPTITWRLNGVPIEELPPDPRRRVDGGTLILSNVQPNDTAVYQCNA 60

Query: 414 ANGIG 418
           +N  G
Sbjct: 61  SNVHG 65

Ig4_L1-NrCAM_like: fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. Length = 76

>gnl|CDD|143205 cd05728, Ig4_Contactin-2-like, Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 18/73 (24%)

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTW--------SKGEVSIDGSDGHYKLTLDGVLQIVGLV 402
           EA+ G+ +   C A G P P Y W        S+  + ++           G L+I  L 
Sbjct: 10  EADIGSSLRWECKASGNPRPAYRWLKNGQPLASENRIEVEA----------GDLRITKLS 59

Query: 403 RQDAGIYVCVAAN 415
             D+G+Y CVA N
Sbjct: 60  LSDSGMYQCVAEN 72

Ig4_Contactin-2-like: fourth Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	615
KOG4597|consensus	560		99.83
cd00109	54	KU BPTI/Kunitz family of serine protease inhibitor	99.47
smart00131	53	KU BPTI/Kunitz family of serine protease inhibitor	99.44
PF00014	53	Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhi	99.41
cd00109	54	KU BPTI/Kunitz family of serine protease inhibitor	99.38
smart00131	53	KU BPTI/Kunitz family of serine protease inhibitor	99.37
PF00014	53	Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhi	99.34
KOG4295|consensus	295		99.2
KOG4295|consensus	295		98.91
cd05852	73	Ig5_Contactin-1 Fifth Ig domain of contactin-1. Ig	98.67
cd05745	74	Ig3_Peroxidasin Third immunoglobulin (Ig)-like dom	98.66
cd05892	75	Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like	98.59
cd05894	86	Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of card	98.59
cd05893	75	Ig_Palladin_C C-terminal immunoglobulin (Ig)-like	98.55
cd05738	74	Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-l	98.51
cd05724	86	Ig2_Robo Second immunoglobulin (Ig)-like domain in	98.5
cd05867	76	Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like do	98.49
cd05726	90	Ig4_Robo Fhird immunoglobulin (Ig)-like domain in	98.47
cd05735	88	Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down	98.45
cd05723	71	Ig4_Neogenin Fourth immunoglobulin (Ig)-like domai	98.44
cd04969	73	Ig5_Contactin_like Fifth Ig domain of contactin. I	98.42
cd05851	88	Ig3_Contactin-1 Third Ig domain of contactin-1. Ig	98.42
cd05764	74	Ig_2 Subgroup of the immunoglobulin (Ig) superfami	98.42
cd05744	75	Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain	98.41
cd05848	94	Ig1_Contactin-5 First Ig domain of contactin-5. Ig	98.4
cd05730	95	Ig3_NCAM-1_like Third immunoglobulin (Ig)-like dom	98.4
cd05868	76	Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain o	98.39
cd05737	92	Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-	98.39
cd05734	79	Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain	98.37
cd05865	96	Ig1_NCAM-1 First immunoglobulin (Ig)-like domain o	98.35
cd07693	100	Ig1_Robo First immunoglobulin (Ig)-like domain in	98.35
cd05746	69	Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like do	98.35
cd05765	81	Ig_3 Subgroup of the immunoglobulin (Ig) superfami	98.35
PF00095	43	WAP: WAP-type (Whey Acidic Protein) 'four-disulfid	98.34
cd04978	76	Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like	98.34
cd05725	69	Ig3_Robo Third immunoglobulin (Ig)-like domain in	98.34
cd05870	98	Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain o	98.34
cd05849	93	Ig1_Contactin-1 First Ig domain of contactin-1. Ig	98.3
cd05722	95	Ig1_Neogenin First immunoglobulin (Ig)-like domain	98.3
cd05850	94	Ig1_Contactin-2 First Ig domain of contactin-2. Ig	98.3
cd04968	88	Ig3_Contactin_like Third Ig domain of contactin. I	98.3
cd04974	90	Ig3_FGFR Third immunoglobulin (Ig)-like domain of	98.28
cd05876	71	Ig3_L1-CAM Third immunoglobulin (Ig)-like domain o	98.25
cd05747	92	Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like	98.25
cd05866	92	Ig1_NCAM-2 First immunoglobulin (Ig)-like domain o	98.24
cd05762	98	Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of	98.23
cd05857	85	Ig2_FGFR Second immunoglobulin (Ig)-like domain of	98.23
cd04975	101	Ig4_SCFR_like Fourth immunoglobulin (Ig)-like doma	98.22
cd05856	82	Ig2_FGFRL1-like Second immunoglobulin (Ig)-like do	98.21
cd05763	75	Ig_1 Subgroup of the immunoglobulin (Ig) superfami	98.21
cd05760	77	Ig2_PTK7 Second immunoglobulin (Ig)-like domain of	98.21
cd05728	85	Ig4_Contactin-2-like Fourth Ig domain of the neura	98.21
cd05869	97	Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain o	98.2
cd05854	85	Ig6_Contactin-2 Sixth Ig domain of contactin-2. Ig	98.2
smart00217	47	WAP Four-disulfide core domains.	98.2
cd05740	91	Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domai	98.18
cd05732	96	Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like dom	98.17
cd05891	92	Ig_M-protein_C C-terminal immunoglobulin (Ig)-like	98.17
cd04970	85	Ig6_Contactin_like Sixth Ig domain of contactin. I	98.17
cd04972	90	Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) o	98.17
cd05733	77	Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like dom	98.17
cd00199	60	WAP whey acidic protein-type four-disulfide core d	98.16
cd05758	98	Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like do	98.15
cd05739	69	Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-li	98.11
cd05874	77	Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of	98.1
cd05858	90	Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain o	98.09
cd04977	92	Ig1_NCAM-1_like First immunoglobulin (Ig)-like dom	98.08
cd05773	109	Ig8_hNephrin_like Eighth immunoglobulin-like domai	98.07
cd05748	74	Ig_Titin_like Immunoglobulin (Ig)-like domain of t	98.06
cd05853	85	Ig6_Contactin-4 Sixth Ig domain of contactin-4. Ig	98.05
cd05756	94	Ig1_IL1R_like First immunoglobulin (Ig)-like domai	98.03
cd05859	101	Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like do	97.99
cd05743	78	Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domai	97.99
cd05863	67	Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain	97.98
cd05875	77	Ig6_hNeurofascin_like Sixth immunoglobulin (Ig)-li	97.98
cd05731	71	Ig3_L1-CAM_like Third immunoglobulin (Ig)-like dom	97.98
cd05736	76	Ig2_Follistatin_like Second immunoglobulin (Ig)-li	97.97
cd04967	91	Ig1_Contactin First Ig domain of contactin. Ig1_Co	97.97
cd05749	81	Ig2_Tyro3_like Second immunoglobulin (Ig)-like dom	97.96
cd04976	71	Ig2_VEGFR Second immunoglobulin (Ig)-like domain o	97.94
PF07679	90	I-set: Immunoglobulin I-set domain; InterPro: IPR0	97.93
cd05845	95	Ig2_L1-CAM_like Second immunoglobulin (Ig)-like do	97.91
cd04973	79	Ig1_FGFR First immunoglobulin (Ig)-like domain of	97.85
cd04971	81	Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of	97.83
cd05864	70	Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain	97.82
cd05855	79	Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of T	97.75
KOG3513|consensus	1051		97.73
KOG4597|consensus	560		97.72
cd07702	72	Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain	97.7
cd05898	98	Ig5_KIRREL3 Fifth immunoglobulin (Ig)-like domain	97.69
cd05873	87	Ig_Sema4D_like Immunoglobulin (Ig)-like domain of	97.69
cd04979	89	Ig_Semaphorin_C Immunoglobulin (Ig)-like domain of	97.67
cd05882	95	Ig1_Necl-1 First (N-terminal) immunoglobulin (Ig)-	97.6
smart00408	63	IGc2 Immunoglobulin C-2 Type.	97.58
cd05750	75	Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain	97.57
cd05729	85	Ig2_FGFR_like Second immunoglobulin (Ig)-like doma	97.55
KOG3513|consensus	1051		97.51
cd05727	96	Ig2_Contactin-2-like Second Ig domain of the neura	97.49
cd05754	85	Ig3_Perlecan_like Third immunoglobulin (Ig)-like d	97.43
cd05742	84	Ig1_VEGFR_like First immunoglobulin (Ig)-like doma	97.4
cd05871	91	Ig_Semaphorin_classIII Immunoglobulin (Ig)-like do	97.37
cd05861	84	Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like	97.28
cd05752	78	Ig1_FcgammaR_like Frst immunoglobulin (Ig)-like do	97.25
cd07701	95	Ig1_Necl-3 First (N-terminal) immunoglobulin (Ig)-	97.18
cd05757	92	Ig2_IL1R_like Second immunoglobulin (Ig)-like doma	97.1
cd05895	76	Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domai	97.06
KOG4194|consensus	873		96.94
cd05717	95	Ig1_Necl-1-3_like First (N-terminal) immunoglobuli	96.86
cd05753	83	Ig2_FcgammaR_like Second immunoglobulin (Ig)-like	96.81
KOG4802|consensus	516		96.75
PF00047	64	ig: Immunoglobulin domain The Prosite family only	96.54
cd07690	94	Ig1_CD4 First immunoglobulin (Ig) domain of CD4. I	96.47
cd05741	92	Ig_CEACAM_D1_like First immunoglobulin (Ig)-like d	96.45
smart00410	86	IG_like Immunoglobulin like. IG domains that canno	96.33
smart00409	86	IG Immunoglobulin.	96.33
PF13895	80	Ig_2: Immunoglobulin domain; PDB: 2V5R_B 2V5M_A 2V	96.3
PHA02826	227	IL-1 receptor-like protein; Provisional	96.26
KOG4221|consensus	1381		95.98
PHA02826	227	IL-1 receptor-like protein; Provisional	95.93
cd05862	86	Ig1_VEGFR First immunoglobulin (Ig)-like domain of	95.88
PHA02785	326	IL-beta-binding protein; Provisional	95.86
cd05896	104	Ig1_IL1RAPL-1_like First immunoglobulin (Ig)-like	95.78
cd05774	105	Ig_CEACAM_D1 First immunoglobulin (Ig)-like domain	95.64
KOG4222|consensus	1281		95.64
PHA02785	326	IL-beta-binding protein; Provisional	95.37
cd05900	112	Ig_Aggrecan Immunoglobulin (Ig)-like domain of the	95.37
KOG4222|consensus	1281		95.32
cd05714	106	Ig_CSPGs_LP Immunoglobulin (Ig)-like domain of cho	95.24
cd05885	80	Ig2_Necl-4 Second immunoglobulin (Ig)-like domain	95.16
cd05759	82	Ig2_KIRREL3-like Second immunoglobulin (Ig)-like d	95.12
cd05877	106	Ig_LP_like Immunoglobulin (Ig)-like domain of huma	95.1
cd05775	97	Ig_SLAM-CD84_like_N N-terminal immunoglobulin (Ig)	94.97
cd05897	95	Ig2_IL1R2_like Second immunoglobulin (Ig)-like dom	94.85
cd00099	105	IgV Immunoglobulin variable domain (IgV). IgV: Imm	94.7
cd05872	85	Ig_Sema4B_like Immunoglobulin (Ig)-like domain of	94.64
cd04983	109	IgV_TCR_alpha_like Immunoglobulin (Ig) variable (V	94.45
cd05881	95	Ig1_Necl-2 First (N-terminal) immunoglobulin (Ig)-	94.16
cd05860	101	Ig4_SCFR Fourth immunoglobulin (Ig)-like domain of	94.13
KOG4221|consensus	1381		93.84
cd05751	91	Ig1_LILRB1_like First immunoglobulin (Ig)-like dom	93.84
PF13927	75	Ig_3: Immunoglobulin domain; PDB: 2D3V_A 1G0X_A 1V	93.77
cd05899	110	IgV_TCR_beta Immunoglobulin (Ig) variable (V) doma	93.56
cd05878	110	Ig_Aggrecan_like Immunoglobulin (Ig)-like domain o	93.15
cd04980	106	IgV_L_kappa Immunoglobulin (Ig) light chain, kappa	92.95
cd05718	98	Ig1_PVR_like First immunoglobulin (Ig) domain of p	92.3
cd04982	116	IgV_TCR_gamma Immunoglobulin (Ig) variable (V) dom	92.28
cd05902	110	Ig_Neurocan Immunoglobulin (Ig)-like domain of the	91.7
cd05713	100	Ig_MOG_like Immunoglobulin (Ig)-like domain of mye	91.31
cd05716	98	Ig_pIgR Immunoglobulin (Ig)-like domain in the pol	91.08
KOG4194|consensus	873		91.0
cd04984	98	IgV_L_lambda Immunoglobulin (Ig) lambda light chai	90.84
cd05880	115	Ig_EVA1 Immunoglobulin (Ig)-like domain of epithel	90.69
cd05901	117	Ig_Versican Immunoglobulin (Ig)-like domain of the	89.73
cd05715	116	Ig_P0-like Immunoglobulin (Ig)-like domain of Prot	88.9
cd05879	116	Ig_P0 Immunoglobulin (Ig)-like domain of Protein z	88.6
PF07686	114	V-set: Immunoglobulin V-set domain; InterPro: IPR0	88.06
PHA02987	189	Ig domain OX-2-like protein; Provisional	87.18
cd05888	100	Ig1_Nectin-4_like Frst immunoglobulin (Ig) domain	87.12
KOG3540|consensus	615		86.28
cd00096	74	Ig Immunoglobulin domain. Ig: immunoglobulin (Ig)	86.18
cd05711	94	Ig_FcalphaRI Immunoglobulin (IG)-like domain of of	86.17
cd00098	95	IgC Immunoglobulin Constant domain. IgC: Immunoglo	86.11
cd07700	107	IgV_CD8_beta Immunoglobulin (Ig) like domain of CD	84.46
cd05846	97	Ig1_MRC-OX-2_like First immunoglobulin (Ig) domain	83.79
cd07706	116	IgV_TCR_delta Immunoglobulin (Ig) variable (V) dom	82.36
cd07705	83	Ig2_Necl-1 Second immunoglobulin (Ig)-like domain	81.8
cd07692	65	Ig_CD3_epsilon Immunoglobulin (Ig)-like domain of	81.51
cd05761	82	Ig2_Necl-1-4_like Second immunoglobulin (Ig)-like	81.16

>KOG4597|consensus

Probab=99.83  E-value=2.2e-20  Score=194.79  Aligned_cols=252  Identities=23%  Similarity=0.357  Sum_probs=192.3

Q ss_pred             CCCCCCCC-CC-------CCCcCCCCCCCCCcccCCCccccCCCC-CccCCcccCCCCCc--------------------
Q psy10163        268 LYKEGECR-PQ-------PQNVCADNCKDDADCTGQAKCCPNDCG-YSCSNLFDITTTTT--------------------  318 (615)
Q Consensus       268 ~~k~g~Cp-~~-------~~~~C~~~C~~dadc~~~~kCC~~~Cg-~~C~~p~~~~~~~~--------------------  318 (615)
                      +.++|.|| +.       .+++|.++|.+|++|...+|||.|.|| .+||+......+..                    
T Consensus        36 ~~~pGvh~~~~~p~~~tnaqs~~~r~~~r~~e~~ngek~~~~~g~~~~~ve~r~~~~~k~~~~g~~pea~~~~~~~~qq~  115 (560)
T KOG4597|consen   36 NSHPGVHPNIKLPNLWTNAQSTCARECTRDQECKNGEKCCYNVGGGLSCVEARVEVGTKFVPDGAEPEALCAQFPCSQQG  115 (560)
T ss_pred             CCCCCcCccccCccccccccccccCccCCcccccccchhceecCCchhheeeeccccceecCCCCCccchhccCcccccc
Confidence            46899999 22       789999999999999999999999998 78999755441000                    


Q ss_pred             -----------------------------------------------------------------cCCCCCCCCCCCCCC
Q psy10163        319 -----------------------------------------------------------------TVSPAYPVYTSTPYT  333 (615)
Q Consensus       319 -----------------------------------------------------------------~~~~~~~~~~~~~~~  333 (615)
                                                                                       .+..++.+++.    
T Consensus       116 s~~dif~~~~r~~~~~~~~~eP~~~~~d~~~k~~n~t~cs~aCgKG~q~~iv~C~~~~t~~~~~~~~cettm~ptp----  191 (560)
T KOG4597|consen  116 SVCDIFDGQPRCTCIDRCEKEPSFTCADDGLKYYNCTMCSEACGKGVQLRIVYCIHGKTWPRVSPDPCETTMAPTP----  191 (560)
T ss_pred             ccccccCCCCCcccccccccCCchhhhhcCceecceEehhhhhcCCceeeeEEEeccccCCCCCCCccccccCCCC----
Confidence                                                                             00000000000    


Q ss_pred             CCCCCCCCCCCCCCCcccccCCCeeeeeecccCCCCCeeeccC-----CceeecCCC--CceEEecCCeEEEeeccccCC
Q psy10163        334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-----GEVSIDGSD--GHYKLTLDGVLQIVGLVRQDA  406 (615)
Q Consensus       334 ~~~~~pp~~~~~~e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k-----~~~~l~~~~--g~~~~~~~gsl~I~~~~~~Ds  406 (615)
                      ...+++..+.  .+..-.+-+++..++.|.++|.|.|.|+|++     .++++..+.  ++.+..+..+|+|++..+.|+
T Consensus       192 e~e~~c~l~~--cpa~w~vg~wetcS~tCg~~G~q~r~V~c~qv~anr~~vv~~~nq~~e~p~vtstcql~ic~ewq~~a  269 (560)
T KOG4597|consen  192 EFEPSCALVD--CPAEWFVGDWETCSSTCGVQGRQYRVVTCEQVFANRENVVMRPNQTVENPVVTSTCQLVICNEWQADA  269 (560)
T ss_pred             CCCCCccccc--CcchhhcccchhhcccccccCCcCceeeeehhhccccceeecCccccCCcceeeeeeEEEcchhhcCC
Confidence            0001111111  1223345567888999999999999999976     456665443  778888999999999999999


Q ss_pred             ceeeecCCCCCCcccccceeeee-cc-------------------------------c----ceeeeeeCCCCceeeecc
Q psy10163        407 GIYVCVAANGIGDPIRKEFNVIV-RG-------------------------------N----YEQWYYDRDTDSCQPFQY  450 (615)
Q Consensus       407 G~Y~C~a~n~~G~p~~~~~~l~V-~~-------------------------------~----~~~wyyd~~~~~C~~F~y  450 (615)
                      |+|.|.+.++.|+ +.+.+.+.+ .+                               +    .-+|.||.+-+.|++|..
T Consensus       270 ~w~tCs~rcg~g~-~~rdv~c~s~~ge~a~daads~p~~~~~~~~e~~~cdmgpC~g~~f~tew~~~~~aqcg~~~~~rs  348 (560)
T KOG4597|consen  270 GWYTCSARCGAGF-LRRDVPCSSVKGEGALDAADSCPADEQEKPAECLTCDMGPCTGLTFVTEWSWHLDAQCGDCETTRS  348 (560)
T ss_pred             Cceeeccccccce-eeccceeeeecccccccccccCCcccccCchhhcCCCCcccCCccchhhhhhhcccccCCceeeee
Confidence            9999999999998 676666533 11                               1    235679999999999999


Q ss_pred             CCCCCCCCCcCChHHHHHHhhcCCCCCCCCCCCCCccCccccccCCCCccccCcCCCCCCCCceEEEeCCCCceEEEEec
Q psy10163        451 GGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYG  530 (615)
Q Consensus       451 ~gC~gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~  530 (615)
                      .+|.||.++|.+.|.|+..|....                     ...|.++-..|+| ....||+|.+-+ +|.    +
T Consensus       349 v~C~~s~~~~~p~E~C~~a~~sg~---------------------~pad~~pc~~GPC-~~e~rW~~s~ws-qCs----~  401 (560)
T KOG4597|consen  349 VVCKGSQGRFEPLEACLVACASGP---------------------RPADTRPCAQGPC-PCEPRWAYSPWS-QCS----G  401 (560)
T ss_pred             eeecCccccccchhhhhhhccCCC---------------------CCccccccccCCC-CCccceeecchh-hhc----c
Confidence            999999999999999999995321                     1357788889999 888999999988 998    8


Q ss_pred             cccCCCCCCCChHHHHHhccCCc
Q psy10163        531 GCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       531 GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                      ||+||.|+|++...|+..|.-.+
T Consensus       402 eCg~g~~~r~vica~~~a~~f~v  424 (560)
T KOG4597|consen  402 ECGGGGNNREVICACEQACPFEV  424 (560)
T ss_pred             ccCCCCcceeEEEeeecCCCccc
Confidence            99999999999999999999765

>cd00109 KU BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold

Probab=99.47  E-value=6.6e-14  Score=108.21  Aligned_cols=54  Identities=46%  Similarity=1.122  Sum_probs=51.9

Q ss_pred             CcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        46 ~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      ++|.+|++.|.|.+.++|||||+.+++|+.|.|+||+||.|+|.|+++|+++|.
T Consensus         1 ~~C~~~~~~g~C~~~~~~~~yd~~~~~C~~f~~~gc~~~~N~F~s~~~C~~~C~   54 (54)
T cd00109           1 DVCSLPPDTGPCKAYIPRYYYDATTKQCEPFTYGGCGGNANNFATKEECERTCG   54 (54)
T ss_pred             CcccCCCCCCCCCCCccEEEEeCCCCccceeECCCccCCccCcCCHHHHHhhcc
Confidence            479999999999999999999999999999999999999999999999999994

BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

>smart00131 KU BPTI/Kunitz family of serine protease inhibitors

Probab=99.44  E-value=1.2e-13  Score=106.35  Aligned_cols=53  Identities=45%  Similarity=1.069  Sum_probs=51.1

Q ss_pred             CcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhC
Q psy10163         46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC   98 (615)
Q Consensus        46 ~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C   98 (615)
                      .+|.+|++.|.|.+.+.|||||+.+++|+.|.|+||+||.|+|.|+++|+++|
T Consensus         1 ~~C~~~~~~g~c~~~~~~w~yd~~~~~C~~f~~~gc~~n~N~F~t~~~C~~~C   53 (53)
T smart00131        1 DVCLLPPDTGPCGGSIPRYYYDPETGTCEPFTYGGCGGNANNFESLEECERTC   53 (53)
T ss_pred             CcccCCCCCCCCCCCeeEEEEeCCCCccceeECCCccCCCCCcCCHHHHHhhC
Confidence            37999999999999999999999999999999999999999999999999988

Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein.

>PF00014 Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhibitor domain; InterPro: IPR002223 The majority of the sequences having this domain belong to the MEROPS inhibitor family I2, clan IB; the Kunitz/bovine pancreatic trypsin inhibitor family, they inhibit proteases of the S1 family [] and are restricted to the metazoa with a single exception: Amsacta moorei entomopoxvirus

Probab=99.41  E-value=3.2e-13  Score=103.79  Aligned_cols=53  Identities=53%  Similarity=1.207  Sum_probs=51.1

Q ss_pred             cccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        47 ~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      +|.+|++.|.|.....|||||..+++|+.|.|+||+||.|+|.|+++|+++|+
T Consensus         1 ~C~~p~~~g~C~~~~~~w~yn~~~~~C~~f~~~~c~~~~N~F~t~~~C~~~C~   53 (53)
T PF00014_consen    1 VCLLPPDEGPCSGNEPRWYYNPSTGRCEQFWYGGCGGNENNFPTEEECQKTCG   53 (53)
T ss_dssp             GGGSTCTCTSSSSCEEEEEEETTTTEEEEEEECSSSSSSSCBSSHHHHHHHHT
T ss_pred             CCCCCCcCCCCCCCccEEEEeCCCCcEEEeEccccCCCCcCCCCHHHHHHHcC
Confidence            59999999999999999999999999999999999999999999999999984

They are short (~50 residue) alpha/beta proteins with few secondary structures. The fold is constrained by 3 disulphide bonds. The type example for this family is aprotinin (bovine pancreatic trypsin inhibitor) [] (or basic protease inhibitor), but the family includes numerous other members [, , , ], such as snake venom basic protease; mammalian inter-alpha-trypsin inhibitors; trypstatin, a rodent mast cell inhibitor of trypsin; a domain found in an alternatively-spliced form of Alzheimer's amyloid beta-protein; domains at the C-termini of the alpha(1) and alpha(3) chains of type VII and type VI collagens; and tissue factor pathway inhibitor precursor.; GO: 0004867 serine-type endopeptidase inhibitor activity; PDB: 1YC0_I 4DTG_K 1TFX_D 1ADZ_A 1BF0_A 3OFW_A 1SHP_A 3M7Q_B 3GYM_J 1BHC_G ....

>cd00109 KU BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold

Probab=99.38  E-value=5.9e-13  Score=102.86  Aligned_cols=53  Identities=49%  Similarity=1.155  Sum_probs=51.0

Q ss_pred             CccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       498 ~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      +|.++++.|.|.....|||||+++++|+.|.|+||+||.|+|.|+++|+++|.
T Consensus         2 ~C~~~~~~g~C~~~~~~~~yd~~~~~C~~f~~~gc~~~~N~F~s~~~C~~~C~   54 (54)
T cd00109           2 VCSLPPDTGPCKAYIPRYYYDATTKQCEPFTYGGCGGNANNFATKEECERTCG   54 (54)
T ss_pred             cccCCCCCCCCCCCccEEEEeCCCCccceeECCCccCCccCcCCHHHHHhhcc
Confidence            69999999999999999999999999999999999999999999999999985

BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

>smart00131 KU BPTI/Kunitz family of serine protease inhibitors

Probab=99.37  E-value=7.2e-13  Score=102.00  Aligned_cols=52  Identities=46%  Similarity=1.119  Sum_probs=50.3

Q ss_pred             CccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhc
Q psy10163        498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC  549 (615)
Q Consensus       498 ~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C  549 (615)
                      +|.++++.|.|.+...|||||+++++|+.|.|+||+||.|+|.|+++|+++|
T Consensus         2 ~C~~~~~~g~c~~~~~~w~yd~~~~~C~~f~~~gc~~n~N~F~t~~~C~~~C   53 (53)
T smart00131        2 VCLLPPDTGPCGGSIPRYYYDPETGTCEPFTYGGCGGNANNFESLEECERTC   53 (53)
T ss_pred             cccCCCCCCCCCCCeeEEEEeCCCCccceeECCCccCCCCCcCCHHHHHhhC
Confidence            6999999999999999999999999999999999999999999999999987

Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein.

>PF00014 Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhibitor domain; InterPro: IPR002223 The majority of the sequences having this domain belong to the MEROPS inhibitor family I2, clan IB; the Kunitz/bovine pancreatic trypsin inhibitor family, they inhibit proteases of the S1 family [] and are restricted to the metazoa with a single exception: Amsacta moorei entomopoxvirus

Probab=99.34  E-value=1.6e-12  Score=99.85  Aligned_cols=53  Identities=49%  Similarity=1.255  Sum_probs=50.7

Q ss_pred             CccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       498 ~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      +|.+|++.|.|.....|||||+.+++|+.|.|.||++|.|+|.|+++|+++|.
T Consensus         1 ~C~~p~~~g~C~~~~~~w~yn~~~~~C~~f~~~~c~~~~N~F~t~~~C~~~C~   53 (53)
T PF00014_consen    1 VCLLPPDEGPCSGNEPRWYYNPSTGRCEQFWYGGCGGNENNFPTEEECQKTCG   53 (53)
T ss_dssp             GGGSTCTCTSSSSCEEEEEEETTTTEEEEEEECSSSSSSSCBSSHHHHHHHHT
T ss_pred             CCCCCCcCCCCCCCccEEEEeCCCCcEEEeEccccCCCCcCCCCHHHHHHHcC
Confidence            48899999999999999999999999999999999999999999999999985

They are short (~50 residue) alpha/beta proteins with few secondary structures. The fold is constrained by 3 disulphide bonds. The type example for this family is aprotinin (bovine pancreatic trypsin inhibitor) [] (or basic protease inhibitor), but the family includes numerous other members [, , , ], such as snake venom basic protease; mammalian inter-alpha-trypsin inhibitors; trypstatin, a rodent mast cell inhibitor of trypsin; a domain found in an alternatively-spliced form of Alzheimer's amyloid beta-protein; domains at the C-termini of the alpha(1) and alpha(3) chains of type VII and type VI collagens; and tissue factor pathway inhibitor precursor.; GO: 0004867 serine-type endopeptidase inhibitor activity; PDB: 1YC0_I 4DTG_K 1TFX_D 1ADZ_A 1BF0_A 3OFW_A 1SHP_A 3M7Q_B 3GYM_J 1BHC_G ....

>KOG4295|consensus

Probab=99.20  E-value=2.1e-11  Score=127.10  Aligned_cols=109  Identities=39%  Similarity=0.797  Sum_probs=84.7

Q ss_pred             eeccCCCCCCCCCcCChHHHHHHhhcCCCCCCCCC-----------------CCC------CccCccccc---cCCCCcc
Q psy10163        447 PFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQ-----------------TPS------TTLAPRQEA---ARNDLCF  500 (615)
Q Consensus       447 ~F~y~gC~gn~N~F~t~~~C~~~C~~~~~~~~~~~-----------------~~~------~~~~~~~~~---~~~~~C~  500 (615)
                      .|.|.||.+|.|+|.+.++|+..|.... +..+..                 .+.      ..+......   ....+|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~   80 (295)
T KOG4295|consen    2 SFKYNGCPGNSNNFFSSEDCQVRCCVGG-PCGGSTSLLLAGNSSPVSSKDPMCPSTYLCVTVLLVSSCLSCCPTKNEICD   80 (295)
T ss_pred             CccccCCCCCccceeehhhhceeecccc-CCCcchHHHHhcCcceeeccCCCCcccceeeeehhccccccccCCCCcccC
Confidence            5789999999999999999999998765 211000                 000      000111111   4468999


Q ss_pred             ccCcCCCCC---CCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCcCCC
Q psy10163        501 LESESGPCT---QQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAED  556 (615)
Q Consensus       501 ~~~~~g~C~---~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~~~~  556 (615)
                      ++.+.|.|.   ....|||||+.+++|.+|+|+||+||.|+|.|+++|+..|.......
T Consensus        81 ~~~~~g~~~~~~~~~~r~~~d~~t~~C~~F~y~GC~gN~N~F~s~~~C~~~C~~~~~~~  139 (295)
T KOG4295|consen   81 QPKDVGLCCCCGTGSPRYYFDPKTKTCQPFIYGGCGGNSNNFLSSEECERACGSADQPS  139 (295)
T ss_pred             CchhhcccccCCCceeeeEEcCCCCeEeeeeecCcCCCcCcccCHHHHHHHhcCCCccC
Confidence            999999887   79999999999999999999999999999999999999999875543

>KOG4295|consensus

Probab=98.91  E-value=1.2e-09  Score=113.75  Aligned_cols=59  Identities=39%  Similarity=0.948  Sum_probs=55.9

Q ss_pred             CCCcccCCCccCCCC---CCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         44 AKDICLQPAVIGDCA---NYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~---~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      ..++|.++.+.|.|.   +.+.|||||..+++|.+|+|+||+||.|||.|+++|+..|....
T Consensus        75 ~~~~C~~~~~~g~~~~~~~~~~r~~~d~~t~~C~~F~y~GC~gN~N~F~s~~~C~~~C~~~~  136 (295)
T KOG4295|consen   75 KNEICDQPKDVGLCCCCGTGSPRYYFDPKTKTCQPFIYGGCGGNSNNFLSSEECERACGSAD  136 (295)
T ss_pred             CCcccCCchhhcccccCCCceeeeEEcCCCCeEeeeeecCcCCCcCcccCHHHHHHHhcCCC
Confidence            478999999999977   89999999999999999999999999999999999999998775

>cd05852 Ig5_Contactin-1 Fifth Ig domain of contactin-1

Probab=98.67  E-value=3.4e-08  Score=81.17  Aligned_cols=71  Identities=28%  Similarity=0.539  Sum_probs=58.9

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      |+.+.|.|.+.|.|.|.|.|.|+...+. ..+++.+..+++|.|.++...|+|.|.|.|.|..|. ......|
T Consensus         1 G~~~~l~C~~~g~P~p~v~W~k~~~~l~-~~~r~~~~~~g~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l   71 (73)
T cd05852           1 GGRVIIECKPKAAPKPKFSWSKGTELLV-NNSRISIWDDGSLEILNITKLDEGSYTCFAENNRGK-ANSTGVL   71 (73)
T ss_pred             CCeEEEEEecceeCCCEEEEEeCCEecc-cCCCEEEcCCCEEEECcCChhHCEEEEEEEECCCCc-eeEEEEE
Confidence            5678999999999999999998665543 456788878899999999999999999999999997 4444433

Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05745 Ig3_Peroxidasin Third immunoglobulin (Ig)-like domain of peroxidasin

Probab=98.66  E-value=3.3e-08  Score=81.11  Aligned_cols=72  Identities=35%  Similarity=0.594  Sum_probs=58.8

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ||+.+.|.|.+.|+|.|.|+|.|+...+.. ..++.+...++|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         1 eG~~v~l~C~~~g~P~p~i~W~k~g~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~~L   72 (74)
T cd05745           1 EGQTVDFLCEAQGYPQPVIAWTKGGSQLSV-DRRHLVLSSGTLRISRVALHDQGQYECQAVNIVGS-QRTVAQL   72 (74)
T ss_pred             CCCeEEEEeECCEecCCEEEEEECCEECCC-CCCeEEccCCeEEEeeCCHHhCEEEEEEEEeCCCc-eeEEEEE
Confidence            578999999999999999999886655542 34555667789999999999999999999999997 4444444

Ig3_Peroxidasin: the third immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells which have undergone programmed cell death, and protection of the organism against non-self.

>cd05892 Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like domain of myotilin

Probab=98.59  E-value=5.4e-08  Score=80.42  Aligned_cols=69  Identities=26%  Similarity=0.402  Sum_probs=54.3

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecC--C--eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--G--VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~--g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.|.|.+.|.|.|.|.|.|+...+.....++.+..+  +  +|.|..+...|+|.|.|.|.|..|. ......|
T Consensus         1 v~l~C~v~G~P~P~i~W~k~~~~i~~~~~r~~~~~~~~g~~~L~I~~~~~~D~G~Y~C~A~N~~G~-~~~~a~L   73 (75)
T cd05892           1 VKLECQISAIPPPKIFWKRNNEMVQYNTDRISLYQDNSGRVTLLIKNVNKKDAGWYTVSAVNEAGV-ATCHARL   73 (75)
T ss_pred             CEEEEEEEecCCCeEEEEECCEECcCCCCeEEEEEcCCCcEEEEECCCChhhCEEEEEEEEcCcCe-EEEEEEE
Confidence            468999999999999999876666544456665433  3  6999999999999999999999997 4444443

Ig_Myotilin_C: C-terminal immunoglobulin (Ig)-like domain of myotilin. Mytolin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to the latter family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Myotilin is most abundant in skeletal and cardiac muscle, and is involved in maintaining sarcomere integrity. It binds to alpha-actinin, filamin and actin. Mutations in myotilin lead to muscle disorders.

>cd05894 Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)

Probab=98.59  E-value=7.8e-08  Score=81.61  Aligned_cols=80  Identities=26%  Similarity=0.458  Sum_probs=63.7

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.+.|.|.+.|+|.|.|.|.++...+....+++.+..   ...|.|..+.+.|+|.|.|.|.|..|. ....
T Consensus         3 ~~~~v~~G~~v~l~c~~~G~P~P~v~W~k~~~~i~~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~-~~~~   81 (86)
T cd05894           3 NTIVVVAGNKLRLDVPISGEPAPTVTWSRGDKAFTETEGRVRVESYKDLSSFVIEGAEREDEGVYTITVTNPVGE-DHAS   81 (86)
T ss_pred             CEEEEEcCCEEEEEeeEeecCCCeEEEEECCEECccCCCeEEEEEcCCeEEEEECCCccCcCEEEEEEEEeCCCc-EEEE
Confidence            456778999999999999999999999987666654445665543   247999999999999999999999997 4544


Q ss_pred             eeee
Q psy10163        425 FNVI  428 (615)
Q Consensus       425 ~~l~  428 (615)
                      +.|.
T Consensus        82 ~~l~   85 (86)
T cd05894          82 LFVK   85 (86)
T ss_pred             EEEE
Confidence            4443

Ig_C5_MyBP_C : the C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C). MyBP_C consists of repeated domains, Ig and fibronectin type 3, and various linkers. Three isoforms of MYBP_C exist and are included in this group: cardiac(c), and fast and slow skeletal muscle (s) MyBP_C. cMYBP_C has insertions between and inside domains and an additional cardiac-specific Ig domain at the N-terminus. For cMYBP_C an interaction has been demonstrated between this C5 domain and the Ig C8 domain.

>cd05893 Ig_Palladin_C C-terminal immunoglobulin (Ig)-like domain of palladin

Probab=98.55  E-value=7.3e-08  Score=79.63  Aligned_cols=69  Identities=29%  Similarity=0.461  Sum_probs=54.5

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCC----eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g----sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ++|.|.+.|.|.|.|.|.|+...+.....++.+..++    .|.|..+...|+|.|+|.|.|..|. ......|
T Consensus         1 v~l~C~v~G~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~a~L   73 (75)
T cd05893           1 VRLECRVSGVPHPQIFWKKENESLTHNTDRVSMHQDNCGYICLLIQGATKEDAGWYTVSAKNEAGI-VSCTARL   73 (75)
T ss_pred             CEEEEEEeEecCCEEEEEECCEECCCCCCeEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEcCCCE-EEEEEEE
Confidence            4689999999999999998766665444566655443    5899999999999999999999997 4444443

Ig_Palladin_C: C-terminal immunoglobulin (Ig)-like domain of palladin. Palladin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to this family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Palladin binds to alpha-actinin ezrin, vasodilator-stimulated phosphoprotein VASP, SPIN90 (DIP, mDia interacting protein), and Src. Palladin also binds F-actin directly, via its Ig3 domain. Palladin is expressed as several alternatively spliced isoforms, having various combinations of Ig-like domains, in a cell-type-specific manner. It has been suggested that palladin's different Ig-like domains may be specialized for distinct functions.

>cd05738 Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=98.51  E-value=1.3e-07  Score=77.65  Aligned_cols=72  Identities=38%  Similarity=0.551  Sum_probs=59.0

Q ss_pred             eeeeecccCCCCCeeeccCCceeecC-CCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ++|.|.+.|.|.|.|.|.|+...+.. ..+++.....+.|.|..+...|+|.|.|.|.|..|........|.|
T Consensus         1 a~l~C~~~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~g~L~i~~~~~~D~G~Y~C~a~N~~G~~~s~~a~l~v   73 (74)
T cd05738           1 ATMLCAASGNPDPEITWFKDFLPVDTTSNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYV   73 (74)
T ss_pred             CEEEEEEeEecCCEEEEEECCEECccCCCCCEEEcCCcEEEECCCChhhCEEEEEEEECCCCceEcccEEEEE
Confidence            47899999999999999986655542 4567777778899999999999999999999999986566555544

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains.

>cd05724 Ig2_Robo Second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=98.50  E-value=2.7e-07  Score=77.55  Aligned_cols=78  Identities=26%  Similarity=0.484  Sum_probs=63.7

Q ss_pred             cccccCCCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        349 TVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      .+.+.+|+.+.|.|.+ .|.|.|.|.|.|+...+.....++.+..+++|.|..+...|+|.|.|.+.|..|......+.
T Consensus         5 ~~~~~~G~~v~l~C~~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~s~~~~   83 (86)
T cd05724           5 DTQVAVGEMAVLECSPPRGHPEPTVSWRKDGQPLNLDNERVRIVDDGNLLIAEARKSDEGTYKCVATNMVGERESAAAR   83 (86)
T ss_pred             cEEEeCCCCEEEEEECCCCCCCCEEEEEECCEECCCCCCCEEEccCCEEEEeECCcccCEEEEEEEEeccCceeeeeEE
Confidence            3456789999999998 79999999998876666555566777778899999999999999999999999974444433

Ig2_Robo: domain similar to the second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antago

>cd05867 Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=98.49  E-value=1.9e-07  Score=76.99  Aligned_cols=74  Identities=30%  Similarity=0.533  Sum_probs=56.9

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      |+.++|.|.+.|.|.|.|+|.++...+.... ........++|.|.++...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 G~~v~l~C~~~G~P~p~i~W~k~g~~i~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V   75 (76)
T cd05867           1 GETARLDCQVEGIPTPNITWSINGAPIEGTDPDPRRHVSSGALILTDVQPSDTAVYQCEARNRHGN-LLANAHVHV   75 (76)
T ss_pred             CCeEEEEEEeeEeCCCeEEEEECCEECCCCCCCceEEeeCCEEEECCCChhhCEEEEEEEECCCCe-EEEEEEEEE
Confidence            5678999999999999999988655554322 2133445688999999999999999999999997 555554443

Ig4_L1-CAM_like: fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05726 Ig4_Robo Fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=98.47  E-value=2.7e-07  Score=78.73  Aligned_cols=77  Identities=30%  Similarity=0.520  Sum_probs=62.0

Q ss_pred             CCeeeeeecccCCCCCeeeccCCcee--e--c---CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVS--I--D---GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~--l--~---~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      |+.++|.|.+.|.|.|.|.|.|....  +  .   ...+++.+..++.|.|.++...|+|.|.|.|.|..|. ....+.|
T Consensus         1 G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~r~~v~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l   79 (90)
T cd05726           1 GRTVTFQCEATGNPQPAIFWQKEGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGS-ILTKAYL   79 (90)
T ss_pred             CCEEEEEEECCccCCCEEEEEeCCCcceeecccCCCCCCeEEECCCCeEEEeeCChhhCEEEEEEEEcCCCc-eEEEEEE
Confidence            56889999999999999999874321  1  0   1245777777889999999999999999999999998 6777888


Q ss_pred             eeccc
Q psy10163        428 IVRGN  432 (615)
Q Consensus       428 ~V~~~  432 (615)
                      .|.+.
T Consensus        80 ~V~~~   84 (90)
T cd05726          80 EVTDV   84 (90)
T ss_pred             EEeec
Confidence            77653

Ig4_Robo: domain similar to the fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05735 Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=98.45  E-value=3.5e-07  Score=77.93  Aligned_cols=76  Identities=28%  Similarity=0.459  Sum_probs=61.3

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec--C-----CeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--D-----GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~--~-----gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      |+.++|.|.+.|.|.|.|.|.++...+.....++.+..  .     ..|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         1 g~~~~l~C~~~g~p~~~i~W~k~~~~i~~~~~r~~~~~~~~~~~~~s~L~I~~~~~~D~G~YtC~A~N~~G~-~~~~~~L   79 (88)
T cd05735           1 GQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGE-DRGIIQL   79 (88)
T ss_pred             CCeEEEEEEEECCCCCEEEEeeCCEECCCCCCcEEEEEecCCCcEEEEEEECCCCcccCEEEEEEEEcCCCc-ceEEEEE
Confidence            56789999999999999999987766655455665542  1     36888899999999999999999998 6677777


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|.+
T Consensus        80 ~V~~   83 (88)
T cd05735          80 TVQE   83 (88)
T ss_pred             EEeC
Confidence            7654

Ig8_DSCAM: the eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>cd05723 Ig4_Neogenin Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=98.44  E-value=2.6e-07  Score=75.20  Aligned_cols=68  Identities=29%  Similarity=0.657  Sum_probs=54.7

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ++|.|.+.|.|.|.|+|.|+...+. ...++.+..++.|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         2 v~l~C~~~G~P~p~v~W~k~g~~~~-~~~~~~~~~~~~l~i~~v~~~D~G~Y~C~A~N~~G~-~~~~~~L   69 (71)
T cd05723           2 VIFECEVTGKPTPTVKWVKNGDMVI-PSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGN-VQASAQL   69 (71)
T ss_pred             EEEEEEEEEeCCCEEEEEECCeECC-CCCCEEEEecCCEEEEcCCcccCEEEEEEEEcCCCE-EEEEEEE
Confidence            6789999999999999988654443 334566667788999999999999999999999997 4444443

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd04969 Ig5_Contactin_like Fifth Ig domain of contactin

Probab=98.42  E-value=3.7e-07  Score=74.64  Aligned_cols=70  Identities=29%  Similarity=0.519  Sum_probs=57.4

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      |+.+.|.|.+.|.|.|.++|.++...+. ...++.+..+++|.|.++...|+|.|.|.+.|..|. ....+.
T Consensus         1 G~~v~L~C~~~g~P~p~v~W~k~~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~~   70 (73)
T cd04969           1 GGDVIIECKPKAAPKPTISWSKGTELLT-NSSRICIWPDGSLEILNVTKSDEGKYTCFAENFFGK-ANSTGS   70 (73)
T ss_pred             CCeEEEEEeeeEcCCCEEEEEECCEEcc-cCCCEEECCCCeEEEccCChhHCEEEEEEEECCCCc-eEEEEE
Confidence            5678999999999999999998766554 345666777789999999999999999999999997 343333

Ig5_Contactin_like: Fifth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05851 Ig3_Contactin-1 Third Ig domain of contactin-1

Probab=98.42  E-value=3.5e-07  Score=77.84  Aligned_cols=76  Identities=32%  Similarity=0.495  Sum_probs=58.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|+|.|....+.. ..+ ....++.|.|.++...|+|.|.|.|.|..|. ....+.|
T Consensus        10 ~~~~~~G~~v~l~C~~~G~P~P~v~W~k~~~~~~~-~~~-~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l   85 (88)
T cd05851          10 DTYALKGQNVTLECFALGNPVPVIRWRKILEPMPA-TAE-ISMSGAVLKIFNIQPEDEGTYECEAENIKGK-DKHQARV   85 (88)
T ss_pred             cEEEeCCCcEEEEEEecccCCCEEEEEECCcCCCC-CCE-EecCCCEEEECcCChhhCEEEEEEEEcCCCc-eEEEEEE
Confidence            45677899999999999999999999875433321 122 2334568999999999999999999999997 4444443

Ig3_Contactin-1: Third Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05764 Ig_2 Subgroup of the immunoglobulin (Ig) superfamily

Probab=98.42  E-value=5.3e-07  Score=73.73  Aligned_cols=71  Identities=28%  Similarity=0.506  Sum_probs=56.5

Q ss_pred             CCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      |+.+.|.|.+.|.|.|.|.|.+ +...+. ...++.....++|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         1 G~~~~l~C~~~g~P~p~v~W~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   72 (74)
T cd05764           1 GQRATLRCKARGDPEPAIHWISPDGKLIS-NSSRTLVYDNGTLDILITTVKDTGSFTCIASNAAGE-ATATVEL   72 (74)
T ss_pred             CCeEEEEEEccCcCCCEEEEEeCCCEEec-CCCeEEEecCCEEEEEECChhhCEEEEEEEECCCCe-EEEEEEE
Confidence            5678999999999999999975 444433 345666777889999999999999999999999997 3443333

Ig_2: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05744 Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain of myotilin, palladin, and myopalladin

Probab=98.41  E-value=3.4e-07  Score=75.49  Aligned_cols=69  Identities=26%  Similarity=0.379  Sum_probs=53.8

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCC----eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g----sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ++|.|.+.|.|.|.|.|.|+...+.....++.+...+    +|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         1 v~L~C~v~G~P~P~v~W~k~~~~i~~~~~r~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   73 (75)
T cd05744           1 VRLECRVSAIPPPQIFWKKNNEMLTYNTDRISLYQDNCGRICLLIQNANKEDAGWYTVSAVNEAGV-VSCNARL   73 (75)
T ss_pred             CEEEEEEeecCCCeEEEEECCEECCCCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCc-EEEEEEE
Confidence            4689999999999999998776665444555554332    5999999999999999999999997 4433333

Ig_Myotilin_like_C: immunoglobulin (Ig)-like domain in myotilin, palladin, and myopalladin. Myotilin, palladin, and myopalladin function as scaffolds that regulate actin organization. Myotilin and myopalladin are most abundant in skeletal and cardiac muscle; palladin is ubiquitously expressed in the organs of developing vertebrates and plays a key role in cellular morphogenesis. The three family members each interact with specific molecular partners: all three bind to alpha-actinin; in addition, palladin also binds to vasodilator-stimulated phosphoprotein (VASP) and ezrin, myotilin binds to filamin and actin, and myopalladin also binds to nebulin and cardiac ankyrin repeat protein (CARP).

>cd05848 Ig1_Contactin-5 First Ig domain of contactin-5

Probab=98.40  E-value=4.9e-07  Score=78.02  Aligned_cols=73  Identities=33%  Similarity=0.574  Sum_probs=56.2

Q ss_pred             cCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeecc-ccCCceeeecCCCCCCcccccce
Q psy10163        353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLV-RQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       353 ~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~-~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+|+.++|.|.+.|.|.|.|+|.|+...+...........+++|.|..+. ..|+|.|.|.|.|..|......+
T Consensus        17 ~~g~~v~l~C~~~G~P~P~i~W~k~g~~l~~~~~~~~~~~~g~L~i~~~~~~~D~G~Y~C~A~N~~G~~~S~~~   90 (94)
T cd05848          17 SDEKKVILNCEARGNPVPTYRWLRNGTEIDTESDYRYSLIDGNLIISNPSEVKDSGRYQCLATNSIGSILSREA   90 (94)
T ss_pred             CCCCEEEEEEEeeecCCCEEEEEECCeECccCCCceEEeeCCeEEEccCCccCcCEEEEEEEEcCCCeEEeccE
Confidence            35789999999999999999998866666433222234456889998874 69999999999999998544443

Ig1_Contactin-5: First Ig domain of the neural cell adhesion molecule contactin-5. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains, anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. In rats, a lack of contactin-5 (NB-2) results in an impairment of the neuronal activity in the auditory system. Contactin-5 is expressed specifically in the postnatal nervous system, peaking at about 3 weeks postnatal. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala; lower levels of expression have been detected in the corpus callosum, caudate nucleus, and spinal cord.

>cd05730 Ig3_NCAM-1_like Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=98.40  E-value=4e-07  Score=78.30  Aligned_cols=80  Identities=33%  Similarity=0.607  Sum_probs=63.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC-eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g-sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+...+ .|.|..+...|.|.|.|.|.|..|. ....+.|
T Consensus        12 ~~~~~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~L   90 (95)
T cd05730          12 NATANLGQSVTLACDADGFPEPTMTWTKDGEPIESGEEKYSFNEDGSEMTILDVDKLDEAEYTCIAENKAGE-QEAEIHL   90 (95)
T ss_pred             ceEEeCCCCEEEEEeccEeCCCEEEEEECCEECcCCCCEEEEeCCCCEEEECCCChhhCEEEEEEEEcCCCe-EEEEEEE
Confidence            3467889999999999999999999988665554433455544444 5999999999999999999999997 5666666


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        91 ~V   92 (95)
T cd05730          91 KV   92 (95)
T ss_pred             EE
Confidence            55

Ig3_NCAM-1_like: domain similar to the third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1,and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the

>cd05868 Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule)

Probab=98.39  E-value=3.7e-07  Score=75.42  Aligned_cols=74  Identities=24%  Similarity=0.338  Sum_probs=55.2

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecC-CCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      |+.++|.|.+.|+|.|.|+|.++...+.. .........++.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 g~~~~l~C~a~G~P~P~i~W~k~g~~i~~~~~~~~~~~~~~~l~i~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l~v   75 (76)
T cd05868           1 GEDGTLICRANGNPKPSISWLTNGVPIEIAPTDPSRKVDGDTIIFSKVQERSSAVYQCNASNEYGY-LLANAFVNV   75 (76)
T ss_pred             CCCEEEEEEeeEeCCCeEEEEECCEEccccCCCceEEecCCEEEECCCCHhhCEEEEEEEEcCCCE-EEEEEEEEe
Confidence            45688999999999999999886544432 222222334457888999999999999999999998 555555543

Ig4_ NrCAM: fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six IG-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05737 Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein

Probab=98.39  E-value=5.1e-07  Score=77.40  Aligned_cols=70  Identities=30%  Similarity=0.519  Sum_probs=56.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-c---CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-L---DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.+.|.|.+.|+|.|.|.|.|+...+.. ..++.+. .   ..+|.|.++...|+|.|.|.|.|..|.
T Consensus        10 ~v~v~~G~~v~L~C~v~G~P~p~v~W~k~g~~l~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~   83 (92)
T cd05737          10 VVTIMEGKTLNLTCTVFGDPDPEVSWLKNDQALAL-SDHYNVKVEQGKYASLTIKGVSSEDSGKYGIVVKNKYGG   83 (92)
T ss_pred             eEEEeCCCcEEEEEEEEecCCCeEEEEECCEECcc-CCCEEEEEcCCCEEEEEEccCChhhCEEEEEEEEECCCc
Confidence            45678999999999999999999999886655542 2344433 2   126999999999999999999999997

Ig_Myomesin_like_C: domain similar to the C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein. Myomesin and M-protein are both structural proteins localized to the M-band, a transverse structure in the center of the sarcomere, and are candidates for M-band bridges. Both proteins are modular, consisting mainly of repetitive Ig-like and fibronectin type III (FnIII) domains. Myomesin is expressed in all types of vertebrate striated muscle; M-protein has a muscle-type specific expression pattern. Myomesin is present in both slow and fast fibers; M-protein is present only in fast fibers. It has been suggested that myomesin acts as a molecular spring with alternative splicing as a means of modifying its elasticity.

>cd05734 Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=98.37  E-value=4.5e-07  Score=75.32  Aligned_cols=71  Identities=31%  Similarity=0.590  Sum_probs=55.2

Q ss_pred             eeeeecccCCCCCeeeccCCce--ee-c----CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEV--SI-D----GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~--~l-~----~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ++|.|.+.|.|.|.|.|.+...  .. .    ...+++.+..+++|.|..+...|+|.|.|.|.|+.|......+.|.
T Consensus         1 v~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~s~~~~l~   78 (79)
T cd05734           1 VTLNCSAEGYPPPTIVWKHSKGRGHPQHTHTCCLAGRIQLLSNGSLLIKHVLEEDSGYYLCKVSNDVGADASKSMVLT   78 (79)
T ss_pred             CEeEeeCeEeCCCEEEEEECCCccccccccccccCCCEEEecCCeEEECcCCcccCEEEEEEEEeCCCCCCceEEEEe
Confidence            4789999999999999976321  11 0    1346777777899999999999999999999999998555555443

Ig7_DSCAM: the seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>cd05865 Ig1_NCAM-1 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1

Probab=98.35  E-value=8.9e-07  Score=76.79  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=57.8

Q ss_pred             cccCCCeeeeeecccCCCC-CeeeccC-CceeecCCCCceEEecC----CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        351 EAEEGNFVTLRCIAIGYPI-PVYTWSK-GEVSIDGSDGHYKLTLD----GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~-P~i~w~k-~~~~l~~~~g~~~~~~~----gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+|+.++|.|.+.|.|. |.|.|.+ +...+.....++.+...    +.|.|..+...|+|.|+|.|.|..|-.....
T Consensus        11 ~v~~G~~v~l~C~v~G~P~~p~i~W~~~~g~~l~~~~~r~~v~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~~g~~~~s   90 (96)
T cd05865          11 EISVGESKFFLCQVAGEAKDKDISWFSPNGEKLTPNQQRISVVRNDDYSSTLTIYNANIDDAGIYKCVVSNEDEGESEAT   90 (96)
T ss_pred             EECCCCeEEEEEEEeCCCCCCEEEEECCCCcCccccCCeEEEEeCCCCceEEEEeccChhhCEEEEEEEEcCCCCcEEEE
Confidence            4678999999999999995 7999986 44333333445544332    4799999999999999999999974335555


Q ss_pred             eeee
Q psy10163        425 FNVI  428 (615)
Q Consensus       425 ~~l~  428 (615)
                      +.|.
T Consensus        91 ~~l~   94 (96)
T cd05865          91 VNVK   94 (96)
T ss_pred             EEEE
Confidence            5544

Ig1_NCAM-1: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans

>cd07693 Ig1_Robo First immunoglobulin (Ig)-like domain in Robo (roundabout) receptors and similar proteins

Probab=98.35  E-value=1.1e-06  Score=75.54  Aligned_cols=81  Identities=30%  Similarity=0.570  Sum_probs=59.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecC----CCCceEEecCCeEEEeec-----cccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG----SDGHYKLTLDGVLQIVGL-----VRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~----~~g~~~~~~~gsl~I~~~-----~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.|+...+..    ...+..+..++.+.+..+     ...|+|.|.|.|.|..|.
T Consensus        10 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~D~G~Y~C~a~N~~G~   89 (100)
T cd07693          10 DLIVSKGDPATLNCKAEGRPTPTIQWLKNGQPLETDKDDPRSHRIVLPSGSLFFLRVVHGRKGRSDEGVYVCVAHNSLGE   89 (100)
T ss_pred             eeEEcCCCeEEEEeeCCcCCCCEEEEEECCEECccccCCCCcceEEecCCcEEEEEeeccCCCcCcCEEEEEEEEccccc
Confidence            45677899999999999999999999886655543    123334445565544433     578999999999999998


Q ss_pred             ccccceeeee
Q psy10163        420 PIRKEFNVIV  429 (615)
Q Consensus       420 p~~~~~~l~V  429 (615)
                      .....+.|.|
T Consensus        90 ~~s~~~~l~v   99 (100)
T cd07693          90 AVSRNASLEV   99 (100)
T ss_pred             eecceEEEEe
Confidence            5555555443

Ig1_Robo: domain similar to the first immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit res

>cd05746 Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like domain of peroxidasin

Probab=98.35  E-value=4.8e-07  Score=73.18  Aligned_cols=61  Identities=38%  Similarity=0.687  Sum_probs=52.6

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.|.|.+.|.|.|.|+|.|+...+. ..+++.+..++.|.|..+...|+|.|.|.|.|..|.
T Consensus         1 v~L~C~~~g~P~p~i~W~k~g~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~   61 (69)
T cd05746           1 VQIPCSAQGDPEPTITWNKDGVQVT-ESGKFHISPEGYLAIRDVGVADQGRYECVARNTIGY   61 (69)
T ss_pred             CEeEecceEeCCCEEEEEECCEECC-CCCCEEECCCCEEEECcCChhhCEEEEEEEECCCCc
Confidence            4689999999999999988665543 346777777889999999999999999999999997

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self.

>cd05765 Ig_3 Subgroup of the immunoglobulin (Ig) superfamily

Probab=98.35  E-value=6.9e-07  Score=74.13  Aligned_cols=74  Identities=34%  Similarity=0.540  Sum_probs=56.1

Q ss_pred             CCeeeeeecccCCCCCeeeccCCc-----eeecCC--CCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGE-----VSIDGS--DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~-----~~l~~~--~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      |+.++|.|.+.|.|.|.|+|.|..     .++...  .+++.....++|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         1 G~~v~l~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   79 (81)
T cd05765           1 GETASFHCDVTGRPPPEITWEKQVHGKENLIMRPNHVRGNVVVTNIGQLVIYNAQPQDAGLYTCTARNSGGL-LRANFPL   79 (81)
T ss_pred             CCcEEEEeeccccCCCcEEEEecCCCCcceeecCCcccCCEEEccccEEEEccCCcccCEEEEEEEecCCce-EEEEEEE
Confidence            567899999999999999998742     122211  23444555678999999999999999999999997 5665555


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        80 ~v   81 (81)
T cd05765          80 SV   81 (81)
T ss_pred             eC
Confidence            43

Ig_3: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>PF00095 WAP: WAP-type (Whey Acidic Protein) 'four-disulfide core'; InterPro: IPR008197 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=98.34  E-value=1.1e-07  Score=69.80  Aligned_cols=41  Identities=44%  Similarity=1.107  Sum_probs=30.2

Q ss_pred             CCCCCC--CCCCCcCCCCCCCCCcccCCCccccCCCCCccCCc
Q psy10163        270 KEGECR--PQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNL  310 (615)
Q Consensus       270 k~g~Cp--~~~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p  310 (615)
                      |+|+||  +.....|..+|++|+||++.+|||.++||..|++|
T Consensus         1 K~G~CP~~~~~~~~c~~~C~~D~dC~~~~KCC~~~Cg~~C~~P   43 (43)
T PF00095_consen    1 KPGSCPPPSPDSGDCRDECSSDSDCPGGQKCCPNGCGRRCVEP   43 (43)
T ss_dssp             SSSB-------SCEESBS-SSGGGSSTT-EEEEESSCEEEE--
T ss_pred             CCCcCcCCCCccCcccccCcCccccCCcCeECCCCccCccCcC
Confidence            689999  33667799999999999999999999999999876

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Whey acidic protein (WAP) is a major component of the whey fraction of milk, which contains a significant number of different proteins. WAP proteins share limited sequence identity, except for their conserved cysteine-rich regions, known as 4-disulphide core (4-DSC) domains, and the positional conservation of specific residues []. Several non-milk proteins also contain 4-DSC patterns, such as certain serine protease inhibitors. WAP itself appears to have a protease-inhibitor function, as seen with its inhibitory effect on the progression of cancer cells [].; GO: 0030414 peptidase inhibitor activity, 0005576 extracellular region; PDB: 1FLE_I 2REL_A 2Z7F_I 3NGG_B.

>cd04978 Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

Probab=98.34  E-value=7e-07  Score=73.20  Aligned_cols=74  Identities=28%  Similarity=0.393  Sum_probs=56.7

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCC-ceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g-~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      |+.++|.|.+.|+|.|.|.|.++...+..... .......+.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 G~~~~l~C~~~g~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l~V   75 (76)
T cd04978           1 GETGRLDCEAEGIPQPTITWRLNGVPIEELPPDPRRRVDGGTLILSNVQPNDTAVYQCNASNVHGY-LLANAFVHV   75 (76)
T ss_pred             CCeEEEEEEceeeCCCEEEEEECCEECCCCCCcceEEccCCEEEECCCChhhCEEEEEEEEccCCe-EEEeEEEEE
Confidence            56789999999999999999875554433222 234455678999999999999999999999997 455554443

Ig4_L1-NrCAM_like: fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd05725 Ig3_Robo Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=98.34  E-value=5.8e-07  Score=72.52  Aligned_cols=67  Identities=28%  Similarity=0.545  Sum_probs=53.5

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ++|.|.+.|.|.|.+.|.|+...+  ..+++.+...+.|.|.++...|+|.|+|.|.|..|. ....+.|
T Consensus         1 v~l~C~~~g~P~p~v~W~k~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l   67 (69)
T cd05725           1 VEFQCEVGGDPVPTVLWRKEDGEL--PKGRAEILDDKSLKIRNVTAGDEGSYTCEAENMVGK-IEASASL   67 (69)
T ss_pred             CEEEEECccCCCCEEEEEECCccC--CCCcEEEeeCCEEEECcCChhHCEEEEEEEEcCCCc-EEEEEEE
Confidence            468999999999999998864333  345666677789999999999999999999999997 3443333

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05870 Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)

Probab=98.34  E-value=9.7e-07  Score=76.57  Aligned_cols=79  Identities=32%  Similarity=0.521  Sum_probs=59.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC--ceee-cC---CCCceEEec---CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG--EVSI-DG---SDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~--~~~l-~~---~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.+.  ...+ ..   ..+++.+..   ..+|.|.++...|+|.|.|.|.|..|.
T Consensus        10 ~~~~~~G~~v~l~C~~~G~P~p~i~W~k~~~g~~~~~~~~~~~~r~~v~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~   89 (98)
T cd05870          10 NETTVENGAATLSCKAEGEPIPEITWKRASDGHTFSEGDKSPDGRIEVKGQHGESSLHIKDVKLSDSGRYDCEAASRIGG   89 (98)
T ss_pred             cEEEcCCCcEEEEEecccCCCCeEEEEECCCCceeccCCcCcCceEEEeecCCeeEEEEeeCCcCCCEEEEEEEeccCCc
Confidence            45677899999999999999999999762  2222 11   234555442   247999999999999999999999997


Q ss_pred             ccccceeee
Q psy10163        420 PIRKEFNVI  428 (615)
Q Consensus       420 p~~~~~~l~  428 (615)
                       ....+.|.
T Consensus        90 -~~~~~~l~   97 (98)
T cd05870          90 -HQKSMYLD   97 (98)
T ss_pred             -ceeEEEEe
Confidence             44444443

Ig5_NCAM-2: the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd05849 Ig1_Contactin-1 First Ig domain of contactin-1

Probab=98.30  E-value=1.1e-06  Score=75.66  Aligned_cols=71  Identities=32%  Similarity=0.588  Sum_probs=55.8

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeecc-ccCCceeeecCCCCCCccccccee
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLV-RQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~-~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ++.++|.|.+.|+|.|.|+|.|+...+.....++. ..++.|.|..+. ..|+|.|.|.|.|..|....+.+.
T Consensus        19 ~~~v~l~C~a~G~P~P~i~W~k~~~~i~~~~~~~~-~~~g~L~I~~~~~~~D~G~Y~C~A~N~~G~~~s~~a~   90 (93)
T cd05849          19 EGKVSVNCRARANPFPIYKWRKNNLDIDLTNDRYS-MVGGNLVINNPDKYKDAGRYVCIVSNIYGKVRSREAT   90 (93)
T ss_pred             CCeEEEeCcCccCCCCEEEEEECCEEccCCCCeEE-EECCEEEECcCCcCCCCEEEEEEEEeCcceEEEccEE
Confidence            45799999999999999999987666654445554 456899998875 689999999999999984444433

Ig1_Contactin-1: First Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05722 Ig1_Neogenin First immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=98.30  E-value=1.5e-06  Score=74.87  Aligned_cols=79  Identities=30%  Similarity=0.513  Sum_probs=61.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEecCCeEEEeec-----cccCCceeeecCCCC-CCcccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLTLDGVLQIVGL-----VRQDAGIYVCVAANG-IGDPIR  422 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~~~gsl~I~~~-----~~~DsG~Y~C~a~n~-~G~p~~  422 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.|+...+... ..++.+..++++.|..+     ...|.|.|.|.|.|. .|....
T Consensus         9 ~~~~~g~~v~l~C~v~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~l~i~~v~~~~~~~~D~G~Y~C~a~N~~~G~~~s   88 (95)
T cd05722           9 IVAVRGGPVVLNCSAEGEPPPKIEWKKDGVLLNLVSDERRQQLPNGSLLITSVVHSKHNKPDEGFYQCVAQNDSLGSIVS   88 (95)
T ss_pred             eEEcCCCCEEEeeecccCCCCEEEEEECCeECccccCcceEEccCCeEEEeeeeccCCCCCcCEEEEEEEECCccCcEEE
Confidence            44567899999999999999999999876666533 23466677788888776     578999999999999 998545


Q ss_pred             cceeee
Q psy10163        423 KEFNVI  428 (615)
Q Consensus       423 ~~~~l~  428 (615)
                      +.+.|.
T Consensus        89 ~~~~l~   94 (95)
T cd05722          89 RTARLT   94 (95)
T ss_pred             eeeEEe
Confidence            555443

Ig1_Neogenin: first immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd05850 Ig1_Contactin-2 First Ig domain of contactin-2

Probab=98.30  E-value=1.1e-06  Score=75.67  Aligned_cols=71  Identities=30%  Similarity=0.411  Sum_probs=54.0

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeecc-ccCCceeeecCCCCCCcccccc
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLV-RQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~-~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .|+.++|.|.+.|+|.|.|+|.++...+....+......+++|.|..+. ..|+|.|.|.|.|..|....+.
T Consensus        18 ~g~~v~l~C~a~g~P~p~i~W~~~g~~l~~~~~~~~~~~~g~L~I~~~~~~~D~G~Y~C~A~N~~G~~~s~~   89 (94)
T cd05850          18 PEEKVTLGCRARASPPATYRWKMNGTEIKFAPESRYTLVAGNLVINNPQKARDAGSYQCLAINRCGTVVSRE   89 (94)
T ss_pred             CCCeEEEEeEceeCCCCEEEEEECCEECccCCCceEEEECCeEEEccCCccCcCEEEEEEEEcCcCcEEEEE
Confidence            3578999999999999999998866555432222333456889998865 5999999999999999744433

Ig1_Contactin-2: First Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>cd04968 Ig3_Contactin_like Third Ig domain of contactin

Probab=98.30  E-value=7.4e-07  Score=75.55  Aligned_cols=69  Identities=35%  Similarity=0.541  Sum_probs=55.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|+|.+....+. ..... ....+.|.|.++...|+|.|.|.+.|..|.
T Consensus        10 ~~~~~~g~~v~l~C~~~g~P~p~v~W~k~~~~~~-~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~   78 (88)
T cd04968          10 DTYALKGQNVTLECFALGNPVPQIKWRKVDGSMP-SSAEI-SMSGAVLKIPNIQFEDEGTYECEAENIKGK   78 (88)
T ss_pred             ceEEeCCCcEEEEEEeeEeCCCEEEEEECCCcCC-CccEE-EEeCCEEEECCCCcccCEEEEEEEEECCCc
Confidence            3456789999999999999999999987443322 12222 246689999999999999999999999997

Ig3_Contactin_like: Third Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd04974 Ig3_FGFR Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=98.28  E-value=1.3e-06  Score=74.58  Aligned_cols=73  Identities=30%  Similarity=0.454  Sum_probs=52.2

Q ss_pred             CCeeeeeecccCCCCCeeeccCCc----eeecCCCCc-e--EE---------ecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGE----VSIDGSDGH-Y--KL---------TLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~----~~l~~~~g~-~--~~---------~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      |..++|.|.+.|.|.|.|+|.|+.    ..+. ..+. .  ++         ...+.|.|.++...|+|.|+|.|.|..|
T Consensus         1 G~~v~l~C~v~g~P~P~i~W~k~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G   79 (90)
T cd04974           1 GSDVEFHCKVYSDAQPHIQWLKHVEVNGSKYG-PDGLPYVTVLKVAGINTTDNESEVLYLRNVSFDDAGEYTCLAGNSIG   79 (90)
T ss_pred             CCcEEEEEEEeCCCCCeEEEEEecccCCceeC-CCCCceEEEEEecCCcccccccceEEEeccccccCcEEEEEeecccC
Confidence            467899999999999999998742    1111 1111 1  11         1124789999999999999999999999


Q ss_pred             cccccceeeee
Q psy10163        419 DPIRKEFNVIV  429 (615)
Q Consensus       419 ~p~~~~~~l~V  429 (615)
                      . ....+.|.|
T Consensus        80 ~-~~~sa~L~V   89 (90)
T cd04974          80 P-SHHSAWLTV   89 (90)
T ss_pred             c-ccCCEEEEe
Confidence            8 555666554

Ig3_FGFR: third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs.

>cd05876 Ig3_L1-CAM Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=98.25  E-value=9.1e-07  Score=72.00  Aligned_cols=70  Identities=33%  Similarity=0.605  Sum_probs=52.4

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ++|.|.+.|.|.|.|.|.++...+... ........++|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 ~~L~C~~~G~P~P~v~W~k~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V   70 (71)
T cd05876           1 LVLECIAEGLPTPEVHWDRIDGPLSPN-RTKKLNNNKTLQLDNVLESDDGEYVCTAENSEGS-ARHHYTVTV   70 (71)
T ss_pred             CEEEEEeeEecCCeEEEEECCcCCCCC-ceeEEcCCCEEEEcccCHHhCEEEEEEEEcCCCe-EEEEEEEEE
Confidence            468999999999999998754333222 1223345678999999999999999999999997 455554443

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05747 Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins

Probab=98.25  E-value=2.2e-06  Score=73.41  Aligned_cols=70  Identities=24%  Similarity=0.409  Sum_probs=57.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.+.|.|.+.|+|.|.+.|.++...+.. ..++.+..   .++|.|.++...|+|.|.|.+.|..|.
T Consensus        12 ~~~~~~G~~~~L~C~~~g~P~p~v~W~k~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~   84 (92)
T cd05747          12 SLTVSEGESARFSCDVDGEPAPTVTWMREGQIIVS-SQRHQITSTEYKSTFEISKVQMSDEGNYTVVVENSEGK   84 (92)
T ss_pred             cEEEeCCCcEEEEEEEeecCCCEEEEEECCEECCC-CCcEEEEEcCCeeEEEECCCCcccCEeEEEEEEcCCCC
Confidence            46788999999999999999999999886655532 33455443   248999999999999999999999997

Ig5_Titin_like: domain similar to the M5, fifth immunoglobulin (Ig)-like domain from the human titin C terminus. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic; depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone, and appears to function similar to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching.

>cd05866 Ig1_NCAM-2 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2

Probab=98.24  E-value=1.9e-06  Score=74.10  Aligned_cols=76  Identities=29%  Similarity=0.410  Sum_probs=59.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCC-ceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|. .+.|.+. ...+. ...++.+..++   .|.|..+...|+|.|.|.|.|..|......+
T Consensus        10 ~~v~~G~~v~l~C~~~G~P~-~v~W~k~~g~~~~-~~~r~~~~~~g~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~i   87 (92)
T cd05866          10 VELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIV-SSQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATV   87 (92)
T ss_pred             eEEcCCCeEEEEEEEEEeCC-eEEEEeCCCeEec-CCCCEEEEeCCCeeEEEEecCChHHCEEEEEEEEcCCCcEEEEEE
Confidence            45778999999999999998 8999863 33332 34567666666   7999999999999999999999997444444


Q ss_pred             ee
Q psy10163        426 NV  427 (615)
Q Consensus       426 ~l  427 (615)
                      .|
T Consensus        88 ~l   89 (92)
T cd05866          88 VL   89 (92)
T ss_pred             EE
Confidence            44

Ig1_NCAM-2: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2 (OCAM/mamFas II, RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd05762 Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK)

Probab=98.23  E-value=2.1e-06  Score=74.69  Aligned_cols=81  Identities=22%  Similarity=0.293  Sum_probs=64.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.+.|.|+...+... .++.+..   ...|.|..+...|+|.|+|.+.|..|. ....+
T Consensus         9 ~~~v~~G~~v~l~C~~~G~p~p~v~W~kdg~~l~~~-~~~~~~~~~~~s~L~I~~~~~~D~G~Ytc~a~N~~G~-~~~~~   86 (98)
T cd05762           9 DMKVRAGESVELFCKVTGTQPITCTWMKFRKQIQEG-EGIKIENTENSSKLTITEGQQEHCGCYTLEVENKLGS-RQAQV   86 (98)
T ss_pred             CEEEECCCEEEEEEEEcccCCCceEEEECCEEecCC-CcEEEEecCCeeEEEECCCChhhCEEEEEEEEcCCCc-eeEEE
Confidence            356789999999999999999999999877666533 3444332   346999999999999999999999998 66666


Q ss_pred             eeeecc
Q psy10163        426 NVIVRG  431 (615)
Q Consensus       426 ~l~V~~  431 (615)
                      .|.|.+
T Consensus        87 ~l~V~~   92 (98)
T cd05762          87 NLTVVD   92 (98)
T ss_pred             EEEEec
Confidence            666643

Ig8_MLCK: the eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). MLCK is a key regulator of different forms of cell motility involving actin and myosin II. Agonist stimulation of smooth muscle cells increases cytosolic Ca2+, which binds calmodulin. This Ca2+-calmodulin complex in turn binds to and activates MLCK. Activated MLCK leads to the phosphorylation of the 20 kDa myosin regulatory light chain (RLC) of myosin II and the stimulation of actin-activated myosin MgATPase activity. MLCK is widely present in vertebrate tissues; it phosphorylates the 20 kDa RLC of both smooth and nonmuscle myosin II. Phosphorylation leads to the activation of the myosin motor domain and altered structural properties of myosin II. In smooth muscle MLCK it is involved in initiating contraction. In nonmuscle cells, MLCK may participate in cell division and cell motility; it has

>cd05857 Ig2_FGFR Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor

Probab=98.23  E-value=2.1e-06  Score=71.99  Aligned_cols=77  Identities=30%  Similarity=0.544  Sum_probs=57.8

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCC--CceEE-ecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--GHYKL-TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+|+.++|.|.+.|.|.|.|.|.|+...+....  ..+.. ....+|.|..+...|+|.|.|.+.|..|. ....+.|
T Consensus         5 ~v~~G~~~~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~l~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   83 (85)
T cd05857           5 AVPAANTVKFRCPAAGNPTPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHL   83 (85)
T ss_pred             EcCCCCEEEEEEEcCCCCCCEEEEEECCEECCCCCceeeeEEeCCceEEEEccCCcccCEEEEEEEEeCCCE-EEEEEEE
Confidence            46689999999999999999999988655553221  12222 23447889999999999999999999997 5555544


Q ss_pred             e
Q psy10163        428 I  428 (615)
Q Consensus       428 ~  428 (615)
                      .
T Consensus        84 ~   84 (85)
T cd05857          84 D   84 (85)
T ss_pred             E
Confidence            3

Ig2_FGFR: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three IG-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans.

>cd04975 Ig4_SCFR_like Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR) and similar proteins

Probab=98.22  E-value=2e-06  Score=75.37  Aligned_cols=82  Identities=20%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             CCcccccCCCeeeeeecccC-CCCCeeeccCCceeecCCCCceEEec-------CCeEEEeeccccCCceeeecCCCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTL-------DGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g~~~~~~-------~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      ...+.+.+|+.+.|.|.+.| .|.|.|.|.|+...+...........       ..+|.|..+.+.|+|.|+|.|.|..|
T Consensus        10 ~~~~~v~~G~~v~L~c~v~g~~P~p~v~W~Kdg~~i~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Ytc~A~N~~G   89 (101)
T cd04975          10 NTTIFVNLGENLNLVVEVEAYPPPPHINWTYDNRTLTNKLTEIVTSENESEYRYVSELKLVRLKESEAGTYTFLASNSDA   89 (101)
T ss_pred             CceEEEECCCCEEEEEEEEecCCCCccEEEeCCeeCCCCcceeEEEeccCcceEEEEEEEeecCHhhCeeEEEEEECCCc
Confidence            34567889999999999999 99999999997766653222222222       25799999999999999999999999


Q ss_pred             cccccceeeee
Q psy10163        419 DPIRKEFNVIV  429 (615)
Q Consensus       419 ~p~~~~~~l~V  429 (615)
                      . ....+.|.|
T Consensus        90 ~-~~~t~~L~V   99 (101)
T cd04975          90 S-KSLTFELYV   99 (101)
T ss_pred             c-EEEEEEEEE
Confidence            7 454454444

Ig4_SCFR_like; fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR). In addition to SCFR this group also includes the fourth Ig domain of platelet-derived growth factor receptors (PDGFR), alpha and beta, the fourth Ig domain of macrophage colony stimulating factor (M-CSF), and the Ig domain of the receptor tyrosine kinase KIT. SCFR and the PDGFR alpha and beta have similar organization: an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR, this fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth SCFR_Ig-like domain abolishes

>cd05856 Ig2_FGFRL1-like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1)

Probab=98.21  E-value=1.4e-06  Score=72.24  Aligned_cols=75  Identities=27%  Similarity=0.474  Sum_probs=54.9

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ....|+.++|.|.+.|.|.|.|.|.++...+.............+|.|.++...|+|.|.|.+.|..|. ....+.
T Consensus         5 ~~~~G~~v~L~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~~   79 (82)
T cd05856           5 ARPVGSSVRLKCVASGNPRPDITWLKDNKPLTPTEIGESRKKKWTLSLKNLKPEDSGKYTCHVSNRAGE-INATYK   79 (82)
T ss_pred             eccCCCeEEEEEEeeEeCCCcEEEEECCcCCcCCccceecCceEEEEEccCChhhCEEEEEEEEcCCcc-EEEEEE
Confidence            455788999999999999999999875444422221111222357999999999999999999999996 444333

Ig2_FGFRL1-like: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1). FGFRL1 is comprised of a signal peptide, three extracellular Ig-like modules, a transmembrane segment, and a short intracellular domain. FGFRL1 is expressed preferentially in skeletal tissues. Similar to FGF receptors, the expressed protein interacts specifically with heparin and with FGF2. FGFRL1 does not have a protein tyrosine kinase domain at its C terminus; neither does its cytoplasmic domain appear to interact with a signaling partner. It has been suggested that FGFRL1 may not have any direct signaling function, but instead acts as a decoy receptor trapping FGFs and preventing them from binding other receptors.

>cd05763 Ig_1 Subgroup of the immunoglobulin (Ig) superfamily

Probab=98.21  E-value=2.1e-06  Score=70.46  Aligned_cols=71  Identities=30%  Similarity=0.515  Sum_probs=52.0

Q ss_pred             eeeeecccCCCCCeeeccCCce--eecCCCCceEEe-cCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEV--SIDGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~--~l~~~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.|.|.+.|.|.|.|+|.|+..  +......++... ..+.|.|.++...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 a~l~C~~~G~P~P~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~-~~~~~~l~V   74 (75)
T cd05763           1 ARLECAATGHPTPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIVDVKIEDTGVYSCTAQNTAGS-ISANATLTV   74 (75)
T ss_pred             CEeEeecccccCCEEEEEeCCCccCCcccccceEEecCCCEEEEeeCCcccCEEEEEEEEcCCCE-EEeeEEEEE
Confidence            4689999999999999987542  122223344433 4568999999999999999999999997 454444443

Ig_1: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05760 Ig2_PTK7 Second immunoglobulin (Ig)-like domain of protein tyrosine kinase (PTK) 7, also known as CCK4

Probab=98.21  E-value=2e-06  Score=71.14  Aligned_cols=72  Identities=29%  Similarity=0.646  Sum_probs=54.7

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCccc-ccceeeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGDPI-RKEFNVIV  429 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~-~~~~~l~V  429 (615)
                      ++|.|.+.|.|.|.|.|.|+...+....+++.+.. .+.|+|..+...|+|.|.|.|.|..|... .+.+.|.|
T Consensus         1 v~L~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~s~~~~~l~v   74 (77)
T cd05760           1 VTLRCHIDGHPRPTYQWFRDGTPLSDGQGNYSVSSKERTLTLRSAGPDDSGLYYCCAHNAFGSVCSSQNFTLSI   74 (77)
T ss_pred             CEEEEEeeecCCCcEEEEECCEECCCCCccEEEeCCCCEEEEeeCCcccCEEEEEEEEeCCCeEeeCceEEEEE
Confidence            47899999999999999886555544444554443 45899999999999999999999999722 34455544

Ig2_PTK7: domain similar to the second immunoglobulin (Ig)-like domain in protein tyrosine kinase (PTK) 7, also known as CCK4. PTK7 is a subfamily of the receptor protein tyrosine kinase family, and is referred to as an RPTK-like molecule. RPTKs transduce extracellular signals across the cell membrane, and play important roles in regulating cell proliferation, migration, and differentiation. PTK7 is organized as an extracellular portion having seven Ig-like domains, a single transmembrane region, and a cytoplasmic tyrosine kinase-like domain. PTK7 is considered a pseudokinase as it has several unusual residues in some of the highly conserved tyrosine kinase (TK) motifs; it is predicted to lack TK activity. PTK7 may function as a cell-adhesion molecule. PTK7 mRNA is expressed at high levels in placenta, melanocytes, liver, lung, pancreas, and kidney. PTK7 is overexpressed in s

>cd05728 Ig4_Contactin-2-like Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=98.21  E-value=2.2e-06  Score=72.37  Aligned_cols=75  Identities=32%  Similarity=0.546  Sum_probs=59.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.+.+|+.++|.|.+.|.|.|.+.|.++...+.. .+++ ....+.|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         9 ~~~~~G~~~~l~C~~~g~p~p~v~W~k~g~~~~~-~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   83 (85)
T cd05728           9 TEADIGSSLRWECKASGNPRPAYRWLKNGQPLAS-ENRI-EVEAGDLRITKLSLSDSGMYQCVAENKHGT-IYASAEL   83 (85)
T ss_pred             cEEcCCCcEEEEEEeeEeCCCEEEEEECCEECCC-CCeE-EEeCCEEEEeeCCHHHCEEEEEEEECCCCe-EEEEEEE
Confidence            4577899999999999999999999886655532 2333 346678999999999999999999999997 4444333

Ig4_Contactin-2-like: fourth Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>cd05869 Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=98.20  E-value=2.3e-06  Score=74.01  Aligned_cols=75  Identities=33%  Similarity=0.537  Sum_probs=55.7

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecC----CCCceEEecC---CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG----SDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~----~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      +..|+.++|.|.+.|.|.|.|+|.++...+..    ..+++.+...   +.|.|..+...|.|.|.|.|.|..|. ....
T Consensus        14 ~~~g~~v~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~   92 (97)
T cd05869          14 MELEEQITLTCEASGDPIPSITWRTSTRNISSEEKTLDGHIVVRSHARVSSLTLKYIQYTDAGEYLCTASNTIGQ-DSQS   92 (97)
T ss_pred             EEcCCCEEEEEEeeEeCCCEEEEEECCccccCCccccCccEEEEcCccEEEEEEecCccCcCEEEEEEEecCCCC-eeEE
Confidence            34578999999999999999999875433321    1244444332   47999999999999999999999997 4444


Q ss_pred             eee
Q psy10163        425 FNV  427 (615)
Q Consensus       425 ~~l  427 (615)
                      +.|
T Consensus        93 ~~l   95 (97)
T cd05869          93 MYL   95 (97)
T ss_pred             EEE
Confidence            444

Ig5_NCAM-1: The fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM) and heterophilic (NCAM-non-NCAM) interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (tr

>cd05854 Ig6_Contactin-2 Sixth Ig domain of contactin-2

Probab=98.20  E-value=2.7e-06  Score=71.94  Aligned_cols=75  Identities=33%  Similarity=0.546  Sum_probs=57.6

Q ss_pred             CeeeeeecccCCCCC--eeeccCCceeecC--CCCceEE----ecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        356 NFVTLRCIAIGYPIP--VYTWSKGEVSIDG--SDGHYKL----TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       356 ~~~tl~C~~~G~P~P--~i~w~k~~~~l~~--~~g~~~~----~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.++|.|.+.|+|.|  .|+|.++...+..  ..+++..    ...++|+|.++...|+|.|+|.|.|.+|. ....+.|
T Consensus         1 ~~~~L~C~a~g~P~p~~~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~n~~g~-~~~~~~L   79 (85)
T cd05854           1 ENLTLQCHASHDPTMDLTFTWSLDDFPIDLDKPNGHYRRMEVKETIGDLVIVNAQLSHAGTYTCTAQTVVDS-ASASATL   79 (85)
T ss_pred             CcEEEEEEEecCCCCCeEEEEEECCeEccccCCCCcEEEEEecceEeEEEEccCChhhCeEEEEEEecCCCC-EEEEEEE
Confidence            368899999999988  5799886655532  2344422    13468999999999999999999999997 6667777


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|.+
T Consensus        80 ~V~~   83 (85)
T cd05854          80 VVRG   83 (85)
T ss_pred             EEEC
Confidence            7754

Ig6_Contactin-2: Sixth Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>smart00217 WAP Four-disulfide core domains

Probab=98.20  E-value=1.2e-06  Score=65.37  Aligned_cols=42  Identities=40%  Similarity=0.877  Sum_probs=36.1

Q ss_pred             CCCCCCC-C----CCCcCCCCCCCCCcccCCCccccCCCCCccCCcc
Q psy10163        270 KEGECRP-Q----PQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLF  311 (615)
Q Consensus       270 k~g~Cp~-~----~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~  311 (615)
                      |+|+||. .    ..+.|..+|.+|.+|++.+|||.+|||..|+.|+
T Consensus         1 K~G~CP~~~~~~c~~~~c~~~C~~D~~C~~~~KCC~~gCg~~C~~P~   47 (47)
T smart00217        1 KPGSCPWPTIASCPLGNPPNKCSSDSDCPGVKKCCFNGCGKSCLTPV   47 (47)
T ss_pred             CCCcCcCCcccccccCCCCccCcCccccCCCCCcCCCCccchhCCCC
Confidence            6899993 2    2467899999999999999999999999998763

>cd05740 Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=98.18  E-value=2.8e-06  Score=72.89  Aligned_cols=77  Identities=23%  Similarity=0.357  Sum_probs=60.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|. .|.|.|.++...+.  .+++.+.. .++|.|..+...|+|.|.|.|.|..|......+.|.
T Consensus        13 ~~v~~g~~v~l~C~a~g~-~p~i~W~kng~~l~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~S~~~~L~   89 (91)
T cd05740          13 QPPEDNQPVTLTCEAEGQ-ATYIWWVNNGSLLV--PPRLQLSNDNRTLTFNNVTRSDTGHYQCEASNEVSNMTSDPYILN   89 (91)
T ss_pred             cccccCCcEEEEEEeCCC-CCEEEEEECCEECC--CCCEEEeCCCCEEEECcCChhhCEEEEEEEEcCCCCEEeeeEEEE
Confidence            467789999999999999 99999987655543  23344443 358999999999999999999999998555555555


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        90 V   90 (91)
T cd05740          90 V   90 (91)
T ss_pred             e
Confidence            4

Ig_CEACAM_D4: immunoglobulin (Ig)-like domain 4 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the

>cd05732 Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM) and similar proteins

Probab=98.17  E-value=3e-06  Score=72.84  Aligned_cols=77  Identities=31%  Similarity=0.445  Sum_probs=57.9

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecC----CCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG----SDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~----~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.+....+..    ..+++.+..   ...|.|.++...|+|.|.|.|.|..|. ..
T Consensus        11 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~   89 (96)
T cd05732          11 QTAVELEQITLTCEAEGDPIPEITWRRATRNFSEGDKSLDGRIVVRGHARVSSLTLKDVQLTDAGRYDCEASNRIGG-DQ   89 (96)
T ss_pred             eeEecCCcEEEEEEEeEcCCCcEEEEECCcccCCCCccccceEEEeCCccEEEEEECcCCcCcCEEeEEEEEeCCCC-cE
Confidence            4567899999999999999999999875433321    124554432   237899999999999999999999997 44


Q ss_pred             cceee
Q psy10163        423 KEFNV  427 (615)
Q Consensus       423 ~~~~l  427 (615)
                      ..+.|
T Consensus        90 ~s~~l   94 (96)
T cd05732          90 QSMYL   94 (96)
T ss_pred             EEEEE
Confidence            44443

Ig5_NCAM-1 like: domain similar to the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM mole

>cd05891 Ig_M-protein_C C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2)

Probab=98.17  E-value=3.1e-06  Score=72.62  Aligned_cols=77  Identities=30%  Similarity=0.491  Sum_probs=58.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEE-ecC---CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL-TLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~-~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.+....+... .++.+ ...   .+|.|..+...|+|.|.|.+.|..|. ....
T Consensus        10 ~v~v~eG~~v~L~C~v~g~P~p~i~W~k~~~~~~~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~   87 (92)
T cd05891          10 VVTIMEGKTLNLTCTVFGNPDPEVIWFKNDQDIELS-EHYSVKLEQGKYASLTIKGVTSEDSGKYSINVKNKYGG-ETVD   87 (92)
T ss_pred             cEEEcCCCEEEEEEEEEEeCCCeEEEEECCEECCCC-CCEEEEEcCCCEEEEEECCCChhhCEEEEEEEEeCCCc-eeeE
Confidence            467789999999999999999999998765544322 33332 222   27899999999999999999999997 4444


Q ss_pred             eee
Q psy10163        425 FNV  427 (615)
Q Consensus       425 ~~l  427 (615)
                      +.+
T Consensus        88 ~~v   90 (92)
T cd05891          88 VTV   90 (92)
T ss_pred             EEE
Confidence            333

Ig_M-protein_C: the C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2). M-protein is a structural protein localized to the M-band, a transverse structure in the center of the sarcomere, and is a candidate for M-band bridges. M-protein is modular consisting mainly of repetitive IG-like and fibronectin type III (FnIII) domains, and has a muscle-type specific expression pattern. M-protein is present in fast fibers.

>cd04970 Ig6_Contactin_like Sixth Ig domain of contactin

Probab=98.17  E-value=2.5e-06  Score=71.84  Aligned_cols=74  Identities=35%  Similarity=0.569  Sum_probs=56.4

Q ss_pred             eeeeeecccCCCCC--eeeccCCceeecC--CCCceE----EecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        357 FVTLRCIAIGYPIP--VYTWSKGEVSIDG--SDGHYK----LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       357 ~~tl~C~~~G~P~P--~i~w~k~~~~l~~--~~g~~~----~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .++|.|.+.|.|.|  .+.|.++...+..  ..+++.    ....++|.|.++...|+|.|+|.|.|..|. ....+.|.
T Consensus         2 ~~~L~C~~~g~P~p~i~~~W~~~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~   80 (85)
T cd04970           2 SITLQCHASHDPTLDLTFTWSFNGVPIDFDKDGGHYRRVGGKDSNGDLMIRNAQLKHAGKYTCTAQTVVDS-LSASADLI   80 (85)
T ss_pred             cEEEEEEEecCCCCCeEEEEEECCeEeeccCCCccEEEEecccccceEEEccCCHHhCeeeEEEEecCCCc-EEEEEEEE
Confidence            57899999999998  5689876544432  223332    234678999999999999999999999997 66677777


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        81 V~~   83 (85)
T cd04970          81 VRG   83 (85)
T ss_pred             EEC
Confidence            765

Ig6_Contactin_like: Sixth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd04972 Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=98.17  E-value=2.5e-06  Score=72.67  Aligned_cols=76  Identities=22%  Similarity=0.328  Sum_probs=57.3

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCc--eEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH--YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~--~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+|+.+.|.|.+.|+|.|.|.|.++...+......  ........|.|..+...|.|.|.|.|.|..|. ....+.|
T Consensus        11 ~v~~G~~v~l~C~~~G~P~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~g~Y~C~A~N~~G~-~~~~~~L   88 (90)
T cd04972          11 VVYEGGTATIRCTAEGSPLPKVEWIIAGLIVIQTRTDTLETTVDIYNLQLSNITSETQTTVTCTAENPVGQ-ANVSVQV   88 (90)
T ss_pred             EEcCCCcEEEEEEEEEcCCCeEEEEECCEEccCCccEEEEecCCEEEEEEecCCcccCEEEEEEEECCCCc-eeEEEEE
Confidence            4778999999999999999999999866555322221  11122347999999999999999999999997 4444433

TrkABC_d4: the fourth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor fo

>cd05733 Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=98.17  E-value=3e-06  Score=70.17  Aligned_cols=69  Identities=28%  Similarity=0.588  Sum_probs=51.2

Q ss_pred             eeeeecccCCCCCeeeccCCceeecC-CCCceEE-ecCCeEEEeeccc----cCCceeeecCCCCCCccccccee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKL-TLDGVLQIVGLVR----QDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~-~~~gsl~I~~~~~----~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ++|.|.+.|+|.|.|+|.|+...+.. ...++.. ...+.|.|..+..    .|+|.|.|.|.|..|......+.
T Consensus         1 i~l~C~~~G~P~P~v~W~k~g~~l~~~~~~~~~~~~~~g~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~~~   75 (77)
T cd05733           1 IVIKCEAKGNPPPTFSWTRNGTHFDPEKDPRVTMKPDSGTLVIDNMNGGRAEDYEGEYQCYASNELGTAISNEIH   75 (77)
T ss_pred             CEEEeeCcccCCCeEEEEECCeECCCCCCCCEEEeCCCCEEEEeccCCCCCcCCCEEEEEEEEcCCCcEEccccE
Confidence            46899999999999999987666543 2334433 3467888887743    68999999999999985444443

Ig6_L1-CAM_like: domain similar to the sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains NrCAM [Ng(neuronglia)CAM-related cell adhesion molecule], which is primarily expressed in the nervous system, and human neurofascin.

>cd00199 WAP whey acidic protein-type four-disulfide core domains

Probab=98.16  E-value=1.4e-06  Score=68.50  Aligned_cols=44  Identities=36%  Similarity=0.865  Sum_probs=37.3

Q ss_pred             CCCCCCCCCC---CCCcCCCCCCCCCcccCCCccccCCCCCccCCcc
Q psy10163        268 LYKEGECRPQ---PQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLF  311 (615)
Q Consensus       268 ~~k~g~Cp~~---~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~  311 (615)
                      ..|+|+||..   ..+.|..+|.+|.+|++.+|||.+|||..|+.|+
T Consensus        14 ~~k~G~CP~~~~~~~~~c~~~C~~D~~C~g~~KCC~~gCg~~C~~P~   60 (60)
T cd00199          14 VEKPGRCPMVNPPSLGIPPNRCSSDSDCPGDKKCCENGCGKSCLTPV   60 (60)
T ss_pred             CcccCcCcCCCccccCcccccCccccccCCCCCcCcCccccccCCCC
Confidence            3489999933   2345899999999999999999999999998874

Members of the family include whey acidic protein, elafin (elastase-specific inhibitor), caltrin-like protein (a calcium transport inhibitor) and other extracellular proteinase inhibitors. A group of proteins containing 8 characteristically-spaced cysteine residuesforming disulphide bonds, have been termed '4-disulphide core' proteins. Protease inhibition occurs by insertion of the inhibitory loop into the active site pocket and interference with the catalytic residues of the protease.

>cd05758 Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2) and similar proteins

Probab=98.15  E-value=4e-06  Score=72.67  Aligned_cols=76  Identities=26%  Similarity=0.399  Sum_probs=58.1

Q ss_pred             cccccCCCeeeeeecccCCCCC-eeeccCCceeecC-CCCceEEecC-------CeEEEeeccccC-CceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDG-SDGHYKLTLD-------GVLQIVGLVRQD-AGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~-~~g~~~~~~~-------gsl~I~~~~~~D-sG~Y~C~a~n~~G  418 (615)
                      .+.+.+|..++|.|.+.|.|.| .|.|.++...+.. ..+++.+...       .+|+|..+...| .|.|.|.|.|..|
T Consensus        10 ~~~~~~G~~v~L~C~~~g~P~P~~v~W~~~~~~i~~~~~~r~~i~~~~~~~~~~s~L~I~~v~~~d~~G~Y~C~A~N~~G   89 (98)
T cd05758          10 TQYAILGDKGRVECFIFSTPPPDRIVWTWKENELESGSSGRYTVETDPSPGGVLSTLTISNTQESDFQTSYNCTAWNSFG   89 (98)
T ss_pred             cEEEeCCCcEEEEEEEcccCCCCEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEECCccccccceeEEEEEEcCCC
Confidence            3457789999999999999999 5999886655543 3456665533       278999999855 8999999999999


Q ss_pred             cccccce
Q psy10163        419 DPIRKEF  425 (615)
Q Consensus       419 ~p~~~~~  425 (615)
                      . ....+
T Consensus        90 ~-~~~~~   95 (98)
T cd05758          90 S-GTAII   95 (98)
T ss_pred             c-ccEEE
Confidence            7 44433

Ig5_KIRREL3-like: domain similar to the fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1), Kirrel2 (Neph3), and Drosophila RST (irregular chiasm C-roughest) protein. These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development.

>cd05739 Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=98.11  E-value=4.1e-06  Score=67.94  Aligned_cols=61  Identities=30%  Similarity=0.640  Sum_probs=45.7

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      |+.++|.|.+.|+|.|.|.|.|+...+.. ..++ ......|+|.++  .|+|.|+|.|.|..|.
T Consensus         1 G~~v~L~C~a~G~P~P~v~W~k~g~~l~~-~~~~-~~~~~~L~i~~~--~d~G~Y~C~A~N~~G~   61 (69)
T cd05739           1 GGSVNLTCVAVGAPMPYVKWMKGGEELTK-EDEM-PVGRNVLELTNI--YESANYTCVAISSLGM   61 (69)
T ss_pred             CCeEEEEEEeeecCCCEEEEEECCEECCC-ccce-ecCccEEEEecc--ccCeeEEEEEEeCCCE
Confidence            56789999999999999999875544422 1222 223346888886  4899999999999996

Ig3_RPTP_IIa_LAR_like: domain similar to the third immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple IG-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Included in this group is Drosophila LAR (DLAR).

>cd05874 Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule)

Probab=98.10  E-value=4.3e-06  Score=69.31  Aligned_cols=68  Identities=25%  Similarity=0.520  Sum_probs=49.0

Q ss_pred             eeeeecccCCCCCeeeccCCceeecC-CCCceEE-ecCCeEEEeeccc----cCCceeeecCCCCCCcccccce
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKL-TLDGVLQIVGLVR----QDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~-~~~gsl~I~~~~~----~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.|.|.+.|+|.|.|+|.|+...+.. ...++.+ ..+++|.|..+..    .|.|.|.|.|.|..|......+
T Consensus         1 ~~l~C~a~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~g~l~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~~   74 (77)
T cd05874           1 IVIQCEAKGKPPPSFSWTRNGTHFDIDKDPKVTMKPNTGTLVINIMNGEKAEAYEGVYQCTARNERGAAVSNNI   74 (77)
T ss_pred             CEEEeeCcccCCCeEEEEECCeECCCcCCCCEEEeCCCceEEEeccccCCCCCCCEEEEEEEEcCCCeEEeeEE
Confidence            46899999999999999886655532 2233333 3467888876654    3789999999999998544443

Ig6_NrCAM: sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05858 Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor 2 (FGFR2)

Probab=98.09  E-value=4.9e-06  Score=70.97  Aligned_cols=73  Identities=27%  Similarity=0.387  Sum_probs=51.6

Q ss_pred             CCeeeeeecccCCCCCeeeccCCc----eeecCCCCc--eEEe-c---------CCeEEEeeccccCCceeeecCCCCCC
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGE----VSIDGSDGH--YKLT-L---------DGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~----~~l~~~~g~--~~~~-~---------~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      |+.++|.|.+.|.|.|.|.|.+..    ..+. ..+.  ..+. .         ...|+|.++...|+|.|+|.|.|..|
T Consensus         1 G~~v~L~C~~~g~P~P~i~W~k~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G   79 (90)
T cd05858           1 GSTVEFVCKVYSDAQPHIQWLKHVEKNGSKYG-PDGLPYVTVLKTAGVNTTDKEMEVLYLRNVTFEDAGEYTCLAGNSIG   79 (90)
T ss_pred             CCeEEEEEEEecCCCCEEEEEEecccCCcEeC-CCCCeeEEEeccCCceecCCceeEEEEccCCHHHCEEEEEEEEeCCC
Confidence            567899999999999999998631    1111 1121  1111 1         13699999999999999999999999


Q ss_pred             cccccceeeee
Q psy10163        419 DPIRKEFNVIV  429 (615)
Q Consensus       419 ~p~~~~~~l~V  429 (615)
                      . ....+.|.|
T Consensus        80 ~-~~~~a~L~V   89 (90)
T cd05858          80 I-SHHSAWLTV   89 (90)
T ss_pred             c-ccceEEEEE
Confidence            7 455554443

Ig3_FGFR-2-like; domain similar to the third immunoglobulin (Ig)-like domain of human fibroblast growth factor receptor 2 (FGFR2). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs. FGFR2 is required for male sex determination.

>cd04977 Ig1_NCAM-1_like First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1 and similar proteins

Probab=98.08  E-value=7.8e-06  Score=70.13  Aligned_cols=77  Identities=26%  Similarity=0.359  Sum_probs=55.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.+.|.|.+.|.| |.|.|.+ +...+.......++...   .+|.|.++...|+|.|.|.|.|..|......+
T Consensus        10 ~~v~~G~~~~l~C~~~G~p-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~g~~~~~sv   88 (92)
T cd04977          10 GEISVGESKFFLCQVIGEP-KDISWFSPNGEKLVTQQQISVVQNDDVRSTLTIYNANIEDAGIYKCVATDAKGTESEATV   88 (92)
T ss_pred             EEECCCCeEEEEEEeEeeC-CeEEEECCCCCEeccCCCEEEEeCCCCEEEEEEecCCcccCEEEEEEEEcCCCCcceeEE
Confidence            4577899999999999998 5999976 33333222222233222   27999999999999999999999776445444


Q ss_pred             ee
Q psy10163        426 NV  427 (615)
Q Consensus       426 ~l  427 (615)
                      .|
T Consensus        89 ~l   90 (92)
T cd04977          89 NL   90 (92)
T ss_pred             EE
Confidence            44

Ig1_NCAM-1 like: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the s

>cd05773 Ig8_hNephrin_like Eighth immunoglobulin-like domain of nephrin

Probab=98.07  E-value=7.7e-06  Score=72.58  Aligned_cols=77  Identities=23%  Similarity=0.490  Sum_probs=60.2

Q ss_pred             cCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--c-----CCeEEEeecc-ccCCceeeecCCCCCCcccccc
Q psy10163        353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--L-----DGVLQIVGLV-RQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       353 ~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--~-----~gsl~I~~~~-~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..|..++|.|.+.|+|.|.++|.++...+.....++.+.  .     .+.|.|..+. ..|.|.|.|.|.|..|. ....
T Consensus        21 ~~g~~v~L~C~a~G~P~p~i~W~k~g~~l~~~~~r~~~~~~~~~~~~~s~L~I~~v~~~~D~G~Y~C~A~N~~G~-~~~~   99 (109)
T cd05773          21 DGSSDANLVCQAQGVPRVQFRWAKNGVPLDLGNPRYEETTEHTGTVHTSILTIINVSAALDYALFTCTAHNSLGE-DSLD   99 (109)
T ss_pred             CCCCEEEEEEECcccCCCEEEEEECCEECCCCCCeEEEEeeccCccceeEEEECcCCccCCCEEEEEEEEeCCcc-CcEE
Confidence            457889999999999999999998777665444555432  1     2468888886 58999999999999998 5666


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.+.
T Consensus       100 i~L~~~  105 (109)
T cd05773         100 IQLVST  105 (109)
T ss_pred             EEEEec
Confidence            666654

Ig8_hNephrin_like: domain similar to the eighth immunoglobulin-like domain in human nephrin. Nephrin is an integral component of the slit diaphragm, and is a central component of the glomerular ultrafilter. Nephrin plays a structural role, and has a role in signaling. Nephrin is a transmembrane protein having a short intracellular portion, and an extracellular portion comprised of eight Ig-like domains, and one fibronectin type III-like domain. The extracellular portions of nephrin, from neighboring foot processes of separate podocyte cells, may interact with each other, and in association with other components of the slit diaphragm, form a porous molecular sieve within the slit pore. The intracellular portion of nephrin is associated with linker proteins, which connect nephrin to the actin cytoskeleton. The intracellular portion is tyrosine phosphorylated, and mediates signaling from the slit diaphragm into the p

>cd05748 Ig_Titin_like Immunoglobulin (Ig)-like domain of titin and similar proteins

Probab=98.06  E-value=6.3e-06  Score=67.35  Aligned_cols=68  Identities=29%  Similarity=0.432  Sum_probs=52.0

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.|.|.+.|.|.|.+.|.++...+. ...++.+..   ...|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus         2 ~~l~c~~~G~P~p~v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l   72 (74)
T cd05748           2 VRLEVPISGRPTPTVTWSKDGKPLK-LSGRVQIETTASSTSLVIKNAERSDSGKYTLTLKNPAGE-KSATINV   72 (74)
T ss_pred             EEEEeeEeeeCCCeEEEEECCEEcC-CCCeEEEEECCCeEEEEECCCCcCcCEEEEEEEECCCcc-EEEEEEE
Confidence            5688999999999999988665553 234444433   347999999999999999999999997 4444433

Ig_Titin_like: immunoglobulin (Ig)-like domain found in titin-like proteins. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic, depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone. It appears to function similarly to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching. Within the sarcomere, titin is also attached to or is associated with myosin binding protein C (MyBP-C). MyBP-C appears to contribute to the generation of passive tension by titin, and similar to titin has repeated Ig-like and FN-

>cd05853 Ig6_Contactin-4 Sixth Ig domain of contactin-4

Probab=98.05  E-value=6.6e-06  Score=69.67  Aligned_cols=75  Identities=28%  Similarity=0.457  Sum_probs=59.2

Q ss_pred             eeeeeecccCCC--CCeeeccCCceeec--CCCCceEE----ecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        357 FVTLRCIAIGYP--IPVYTWSKGEVSID--GSDGHYKL----TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       357 ~~tl~C~~~G~P--~P~i~w~k~~~~l~--~~~g~~~~----~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.|.|.+.++|  .+.|.|.++...|+  ....+|..    ..+++|.|.++...|+|.|+|.|.+.++. ......|.
T Consensus         2 ~~~l~C~v~~d~~l~~~~~W~~dg~~i~~~~~~~~~~~~~~~~~~~~L~I~nv~~~dsG~YtC~a~n~~~~-~~a~a~L~   80 (85)
T cd05853           2 SIVLPCQVSHDHSLDIVFTWSFNGHLIDFQKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDK-LSAAADLI   80 (85)
T ss_pred             cEEEEEEeccCCCCCcEEEEEECCEECcccCCCccEEEeccCCCCCcEEEecCCHHHCEEEEEEEEcccCc-eEEEEEEE
Confidence            578999998754  77899998766665  33456655    25678999999999999999999999987 77777777


Q ss_pred             eccc
Q psy10163        429 VRGN  432 (615)
Q Consensus       429 V~~~  432 (615)
                      |.++
T Consensus        81 V~~p   84 (85)
T cd05853          81 VRGP   84 (85)
T ss_pred             EecC
Confidence            7653

Ig6_Contactin-4: sixth Ig domain of the neural cell adhesion molecule contactin-4. Contactins are neural cell adhesion molecules, and are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. Highest expresson of contactin-4 is in testes, thyroid, small intestine, uterus and brain. Contactin-4 plays a role in the response of neuroblastoma cells to differentiating agents, such as retinoids. The contactin 4 gene is associated with cerebellar degeneration in spinocerebellar ataxia type 16.

>cd05756 Ig1_IL1R_like First immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins

Probab=98.03  E-value=7.9e-06  Score=70.55  Aligned_cols=77  Identities=19%  Similarity=0.288  Sum_probs=56.7

Q ss_pred             ccccCCCeeeeeecccC-----CCCCeeeccCCceee--cCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        350 VEAEEGNFVTLRCIAIG-----YPIPVYTWSKGEVSI--DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-----~P~P~i~w~k~~~~l--~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      ..+.+|+.+.|.|.+.|     .|.|.|+|.|+...+  ....+..+...++.|.|..+...|+|.|+|.+.|..|. .+
T Consensus         9 ~~v~~G~~~~L~C~~~g~~~~~~p~~~v~Wyk~~~~~~~~~~~~~r~~~~~~~L~I~~~~~~DsG~Y~C~~~N~~g~-~~   87 (94)
T cd05756           9 SYVLEGEPVVIKCPLFYSYIAQSPGLNLTWYKSDGKTPIPTEERSRMHQQKDLLWFLPAALEDSGLYTCVVRNSTYC-MK   87 (94)
T ss_pred             EEEecCCCeEEECCCCCcccccCCCceEEEEEcCCCCcccccccceeeecCCeEEEccCCcccCeEEEEEEcCCCcc-EE
Confidence            34568999999999999     799999998754221  11122223335678999999999999999999999887 44


Q ss_pred             cceee
Q psy10163        423 KEFNV  427 (615)
Q Consensus       423 ~~~~l  427 (615)
                      ..+.|
T Consensus        88 ~~~~L   92 (94)
T cd05756          88 VSISL   92 (94)
T ss_pred             EEEEE
Confidence            44433

Ig1_IL1R_like: domain similar to the first immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three Ig-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta.

>cd05859 Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha

Probab=97.99  E-value=7.4e-06  Score=71.71  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=58.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--------cCCeEEEeeccccCCceeeecCCCCCCccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--------LDGVLQIVGLVRQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--------~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~  421 (615)
                      ..+..++.+.|.|.+.|.|.|.|.|.|+...+..+..+....        ...+|.|..+...|+|.|+|.|.|..|. .
T Consensus        13 ~~~~~~~~~~l~~~v~g~P~P~v~W~kdg~~l~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~D~G~Ytc~A~N~~g~-~   91 (101)
T cd05859          13 EFANLHEVKEFVVEVEAYPPPQIRWLKDNRTLIENLTEITTSEHNVQETRYVSKLKLIRAKEEDSGLYTALAQNEDAV-K   91 (101)
T ss_pred             EEEecCCcEEEEEEEEEeCCCceEEEECCEECcCCcceEEeccccccceeeccEEEEeeCCHHHCEEEEEEEEcCCce-E
Confidence            456677889999999999999999998766554333222221        1257999999999999999999999887 4


Q ss_pred             ccceeeee
Q psy10163        422 RKEFNVIV  429 (615)
Q Consensus       422 ~~~~~l~V  429 (615)
                      ...+.|.|
T Consensus        92 ~~t~~l~V   99 (101)
T cd05859          92 SYTFALQI   99 (101)
T ss_pred             EEEEEEEE
Confidence            44444443

IG4_PDGFR-alpha: The fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha. PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFR alpha binds to all three PDGFs, whereas the PDGFR beta (not included in this group) binds only to PDGF-B. PDGF alpha is organized as an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFR alpha and PDGFR beta are essential for normal development.

>cd05743 Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2

Probab=97.99  E-value=7e-06  Score=67.99  Aligned_cols=64  Identities=30%  Similarity=0.575  Sum_probs=50.5

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCc
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      |+.++|.|.+.|.|.|.|+|.++...+. ...++.+...   +.|.|.++...|+|.|.|.|.|..|.
T Consensus         1 G~~v~l~C~~~g~P~p~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~   67 (78)
T cd05743           1 GETVEFTCVATGVPTPIINWRLNWGHVP-DSARVSITSEGGYGTLTIRDVKESDQGAYTCEAINTRGM   67 (78)
T ss_pred             CCEEEEEEEEEEecCCEEEEEECCeECC-CCCCEEEEECCCEEEEEECCCChHHCEEEEEEEEecCCE
Confidence            5678999999999999999987543332 2244444332   47999999999999999999999987

Ig_Perlecan_D2_like: the immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2. Perlecan consists of five domains. Domain I has three putative heparan sulfate attachment sites; domain II has four LDL receptor-like repeats, and one Ig-like repeat; domain III resembles the short arm of laminin chains; domain IV has multiple Ig-like repeats (21 repeats in human perlecan); and domain V resembles the globular G domain of the laminin A chain and internal repeats of EGF. Perlecan may participate in a variety of biological functions including cell binding, LDL-metabolism, basement membrane assembly and selective permeability, calcium binding, and growth- and neurite-promoting activities.

>cd05863 Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3)

Probab=97.98  E-value=5.2e-06  Score=67.04  Aligned_cols=62  Identities=27%  Similarity=0.443  Sum_probs=48.9

Q ss_pred             eeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       359 tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .|.|.+.|.|.|.++|.|+...+...      ...+.|.|..+...|+|.|+|.|.|..|. ..+.+.+
T Consensus         2 ~l~c~v~g~P~P~v~W~kdg~~l~~~------~~~~~L~i~~v~~~D~G~YtC~a~N~~g~-~~~~~~~   63 (67)
T cd05863           2 KLPVKVAAYPPPEFQWYKDGKLISGK------HSQHSLQIKDVTEASAGTYTLVLWNSAAG-LEKRISL   63 (67)
T ss_pred             EEEEEEEEeCCCEEEEEECCEECccc------CCcCEEEECCCCHHHCEEEEEEEEECCcc-EEEEEEE
Confidence            57899999999999998866555311      13458999999999999999999999996 4444443

Ig2_VEGFR-3: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-3 (Flt-4) binds two members of the VEGF family (VEGF-C and -D) and is involved in tumor angiogenesis and growth.

>cd05875 Ig6_hNeurofascin_like Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)

Probab=97.98  E-value=1e-05  Score=67.11  Aligned_cols=68  Identities=24%  Similarity=0.511  Sum_probs=49.9

Q ss_pred             eeeeecccCCCCCeeeccCCceeec-CCCCceEE-ecCCeEEEeeccc----cCCceeeecCCCCCCcccccce
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKL-TLDGVLQIVGLVR----QDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~-~~~g~~~~-~~~gsl~I~~~~~----~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.|.|.+.|+|.|.|+|.++...+. ...+++.+ ..+++|.|..+..    .|+|.|.|.|.|..|......+
T Consensus         1 ~~l~C~~~G~P~P~v~W~k~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~~~   74 (77)
T cd05875           1 IIIECEAKGNPVPTFQWTRNGKFFNVAKDPRVSMRRRSGTLVIDFSGGGRPEDYEGEYQCFARNNLGTALSNKI   74 (77)
T ss_pred             CEEEEeccccCCCEEEEEECCEEccCcCCCcEEEeCCCceEEEeccCCCCCCCCCEEEEEEEEeccceEEEEEE
Confidence            3688999999999999998665543 23445544 3567888887642    3689999999999997544433

Ig6_hNeurofascin_like: the sixth immunoglobulin (Ig)-like domain of human neurofascin (NF). NF belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and a cytoplasmic domain. NF has many alternatively spliced isoforms having different temporal expression patterns during development. NF participates in axon subcellular targeting and synapse formation, however little is known of the functions of the different isoforms.

>cd05731 Ig3_L1-CAM_like Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=97.98  E-value=6.4e-06  Score=66.41  Aligned_cols=69  Identities=30%  Similarity=0.537  Sum_probs=50.3

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCCCce-EEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY-KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~-~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ++|.|.+.|.|.|.+.|.+....+.  .++. .....+.|.|.++...|+|.|.|.|.|..|. ....+.|.|
T Consensus         1 v~l~C~~~g~P~p~v~W~k~~~~~~--~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V   70 (71)
T cd05731           1 LLLECIAEGLPTPEISWIKIGGELP--ADRTKFENFNKTLKIDNVSEEDDGEYRCTASNSLGS-ARHTISVTV   70 (71)
T ss_pred             CEEEEEeeEecCCeEEEEECCeECC--CCceeEecCCCEEEECCCCHHHCEEEEEEEEeCCce-EEEEEEEEE
Confidence            4689999999999999987543332  1222 2233458999999999999999999999996 444444433

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin.

>cd05736 Ig2_Follistatin_like Second immunoglobulin (Ig)-like domain of a follistatin-like molecule encoded by the Mahya gene and similar proteins

Probab=97.97  E-value=1.1e-05  Score=66.24  Aligned_cols=72  Identities=32%  Similarity=0.554  Sum_probs=55.1

Q ss_pred             eeeeecccCCCCCeeeccCCceeecC-CCCceEEecCC-eEEEeeccccCCceeeecCCCCCCcccccceeeeec
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~~~~g-sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      +.|.|.+.|.|.|.|.|.|+...+.. ...++....++ .|.|..+...|.|.|.|.+.|..|. ....+.|.|.
T Consensus         1 ~~L~C~v~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~   74 (76)
T cd05736           1 ASLRCHAEGIPLPRLTWLKNGMDITPKLSKQLTLIANGSELHISNVRYEDTGAYTCIAKNEAGV-DEDISSLFVE   74 (76)
T ss_pred             CEeEeEeeecCCCEEEEEECCEECCCCCCccEEEeCCCCEEEECcCCcccCEEEEEEEEcCCCC-cceEEEEEEE
Confidence            35889999999999999875544432 23455555555 5999999999999999999999997 5666666553

Ig2_Follistatin_like: domain similar to the second immunoglobulin (Ig)-like domain found in a follistatin-like molecule encoded by the CNS-related Mahya gene. Mahya genes have been retained in certain Bilaterian branches during evolution. They are conserved in Hymenoptera and Deuterostomes, but are absent from other metazoan species such as fruit fly and nematode. Mahya proteins are secretory, with a follistatin-like domain (Kazal-type serine/threonine protease inhibitor domain and EF-hand calcium-binding domain), two Ig-like domains, and a novel C-terminal domain. Mahya may be involved in learning and memory and in processing of sensory information in Hymenoptera and vertebrates. Follistatin is a secreted, multidomain protein that binds activins with high affinity and antagonizes their signaling.

>cd04967 Ig1_Contactin First Ig domain of contactin

Probab=97.97  E-value=1.2e-05  Score=68.74  Aligned_cols=65  Identities=37%  Similarity=0.642  Sum_probs=51.3

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecC-CCCceEEecCCeEEEeecc-ccCCceeeecCCCCCCc
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKLTLDGVLQIVGLV-RQDAGIYVCVAANGIGD  419 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~~~~gsl~I~~~~-~~DsG~Y~C~a~n~~G~  419 (615)
                      .++.++|.|.+.|+|.|.|+|.++...+.. ...++ ...++.|.|.++. ..|+|.|.|.+.|..|.
T Consensus        18 ~~~~~~l~C~~~g~p~p~i~W~k~~~~l~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~G~   84 (91)
T cd04967          18 DEGKVSLNCRARGSPPPTYRWLMNGTEIDDEPDSRY-SLVGGNLVISNPSKAKDAGRYQCLASNIVGT   84 (91)
T ss_pred             CCCEEEEEEeeeEcCCCEEEEEECCEECCCCCCCCE-EEECCEEEEecCCccCCCEEEEEEEEcCCCE
Confidence            456799999999999999999886655532 22333 4456789888876 48999999999999996

Ig1_Contactin: First Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnata

>cd05749 Ig2_Tyro3_like Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)

Probab=97.96  E-value=8.9e-06  Score=68.22  Aligned_cols=67  Identities=24%  Similarity=0.439  Sum_probs=51.4

Q ss_pred             cccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~  421 (615)
                      .+.+.+|+.+.|.|.+.|+|.| .|+|.|+...+...   + ....+.|.|..+  .|.|.|.|.|.|..|...
T Consensus         7 ~~~v~~G~~v~l~C~a~G~P~P~~I~W~k~g~~l~~~---~-~~~~s~L~i~~~--~d~g~Y~C~A~N~~G~~~   74 (81)
T cd05749           7 DLSVTANTPFNLTCQAVGPPEPVEILWWQGGSPLGDP---P-APSPSVLNVPGL--NETSKFSCEAHNAKGVTT   74 (81)
T ss_pred             ceEEcCCCCEEEEEEeeeecCCeEEEEEECCEECCCC---C-CCCCCEEEEccc--cCCeEEEEEEEeccCcEE
Confidence            4567889999999999999999 79999876555421   1 123456777776  478999999999999743

Ig2_Tyro3_like: the second immunoglobulin (Ig)-like domain in the Axl/Tyro3 family of receptor tyrosine kinases (RTKs). This family includes Axl (also known as Ark, Ufo, and Tyro7), Tyro3 (also known as Sky, Rse, Brt, Dtk, and Tif), and Mer (also known as Nyk, c-Eyk, and Tyro12). Axl/Tyro3 family receptors have an extracellular portion with two Ig-like domains followed by two fibronectin-types III (FNIII) domains, a membrane-spanning single helix, and a cytoplasmic tyrosine kinase domain. Axl, Tyro3 and Mer are widely expressed in adult tissues, though they show higher expression in the brain, in the lymphatic and vascular systems, and in the testis. Axl, Tyro3, and Mer bind the vitamin K dependent protein Gas6 with high affinity, and in doing so activate their tyrosine kinase activity. Axl/Gas6 signaling may play a part in cell adhesion processes, prevention of apoptosis, and c

>cd04976 Ig2_VEGFR Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR)

Probab=97.94  E-value=9.3e-06  Score=66.13  Aligned_cols=59  Identities=25%  Similarity=0.343  Sum_probs=48.3

Q ss_pred             eeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       359 tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .|.|.+.|.|.|.+.|.|+...+... .+ ......+|.|.++...|+|.|.|.|.|..|.
T Consensus         2 ~l~c~v~g~P~p~v~W~k~g~~l~~~-~~-~~~~~~~L~I~~v~~~D~G~YtC~a~N~~g~   60 (71)
T cd04976           2 RLPVKVKAYPPPEIQWYKNGKLISEK-NR-TKKSGHSLTIKDVTEEDAGNYTVVLTNKQAK   60 (71)
T ss_pred             EEEeEEEEeCCCEEEEEECCEECCCC-CE-EEcCCCEEEECcCCHHHCEEEEEEEEcCCcc
Confidence            57899999999999998866555422 33 3445678999999999999999999999886

Ig2_VEGFR: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A. VEGFR-1 may play an inhibitory part in these processes by binding VEGF and interfering with its interaction with VEGFR-2. VEGFR-1 has a signa

>PF07679 I-set: Immunoglobulin I-set domain; InterPro: IPR013098 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=97.93  E-value=1.4e-05  Score=67.51  Aligned_cols=78  Identities=35%  Similarity=0.624  Sum_probs=61.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++.+..   ...|.|.++...|+|.|.|.+.|..|. ....
T Consensus         8 ~~~~v~~G~~~~l~c~~~~~p~~~v~W~~~~~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~g~-~~~~   85 (90)
T PF07679_consen    8 KDVTVKEGESVTLECEVSGNPPPTVTWYKNGRPLTS-SQRYQIESDGGSSSLTIKNVTREDAGTYTCVASNSSGE-ATAS   85 (90)
T ss_dssp             SEEEEETTSEEEEEEEEEESSSSEEEEEETTEEEES-SSSEEEEEETTEEEEEESSESGGGSEEEEEEEEETTEE-EEEE
T ss_pred             CCEEEeCCCEEEEEEEEEeCCCCcccccccccceee-eeeeeeecccceeEEccCCCChhhCEEEEEEEEECCCE-EEEE
Confidence            356788999999999999999999999887666654 34444432   337999999999999999999999886 4444


Q ss_pred             eee
Q psy10163        425 FNV  427 (615)
Q Consensus       425 ~~l  427 (615)
                      +.|
T Consensus        86 ~~l   88 (90)
T PF07679_consen   86 VNL   88 (90)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            444

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents I-set domains, which are found in several cell adhesion molecules, including vascular (VCAM), intercellular (ICAM), neural (NCAM) and mucosal addressin (MADCAM) cell adhesion molecules, as well as junction adhesion molecules (JAM). I-set domains are also present in several other diverse protein families, including several tyrosine-protein kinase receptors, the hemolymph protein hemolin, the muscle proteins titin, telokin, and twitchin, the neuronal adhesion molecule axonin-1 [], and the signalling molecule semaphorin 4D that is involved in axonal guidance, immune function and angiogenesis [].; PDB: 3MTR_A 2EDK_A 3DMK_B 1KOA_A 3NCM_A 2NCM_A 2V9Q_A 2CR3_A 3QQN_A 3QR2_A ....

>cd05845 Ig2_L1-CAM_like Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=97.91  E-value=2.6e-05  Score=67.34  Aligned_cols=72  Identities=24%  Similarity=0.256  Sum_probs=58.9

Q ss_pred             CcccccCCCeeeeeec-ccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCc-eeeecCCCCCCc
Q psy10163        348 PTVEAEEGNFVTLRCI-AIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG-IYVCVAANGIGD  419 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~-~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG-~Y~C~a~n~~G~  419 (615)
                      ..+.+.+|+.+.|.|. ..|.|.|.|.|.+....+....++..+..+|.|.|.++...|+| .|+|.|.+....
T Consensus        11 ~~v~V~eG~~~~L~C~pP~g~P~P~i~W~~~~~~~i~~~~Ri~~~~~GnL~fs~v~~~D~g~~Y~C~a~~~~~~   84 (95)
T cd05845          11 RPVEVEEGDSVVLPCNPPKSAVPLRIYWMNSDLLHITQDERVSMGQNGNLYFANVEEQDSHPDYICHAHFPGLR   84 (95)
T ss_pred             ceeEEecCCCEEEEecCCCCCCCCEEEEECCCCccccccccEEECCCceEEEEEEehhhCCCCeEEEEEccccc
Confidence            3468889999999996 79999999999764333223467877778899999999999999 799999987543

Ig2_L1-CAM_like: domain similar to the second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd04973 Ig1_FGFR First immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=97.85  E-value=2.9e-05  Score=64.52  Aligned_cols=67  Identities=25%  Similarity=0.538  Sum_probs=53.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+. .|.|.|.|+...+.. ..++.+ ..++|.|..+...|+|.|.|.+.|..|.
T Consensus         4 ~~~~~G~~v~l~C~~~~~-~~~v~W~k~g~~l~~-~~~~~~-~~~~L~I~~~~~~DsG~Y~C~a~n~~g~   70 (79)
T cd04973           4 YSAHPGDLLQLRCRLRDD-VQSINWTKDGVQLGE-NNRTRI-TGEEVQIKDAVPRDSGLYACVTSSPSGS   70 (79)
T ss_pred             EEecCCCCEEEEEEecCC-CceEEEeeCCcCCCC-CceEEE-eCCEEEECCCChhhCEEEEEEEeCCCCc
Confidence            346689999999999997 578999987655543 234443 4568999999999999999999998876

Ig1_FGFR: The first immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for all FGFs.

>cd04971 Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=97.83  E-value=2.1e-05  Score=65.92  Aligned_cols=60  Identities=27%  Similarity=0.382  Sum_probs=46.2

Q ss_pred             eeecccCCCCCeeeccCCceeecCCCCceEE---------ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        360 LRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL---------TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       360 l~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~---------~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.|.+.|+|.|.|+|.|+...+.........         ...+.|.|..+...|+|.|+|.|.|..|.
T Consensus         3 i~~~v~G~P~P~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~YtC~A~N~~G~   71 (81)
T cd04971           3 IPFTVRGNPKPTLTWYHNGAVLNESDYIRTEIHYEVTTPTEYHGCLQFDNPTHVNNGNYTLVASNEYGQ   71 (81)
T ss_pred             EEEEeEeeCCCcEEEEECCEECcCCCceeEEEEeecccccccEEEEEECCCCcccCeEEEEEEEeCCCC
Confidence            4688999999999999877666533321111         12346999999999999999999999997

TrkABC_d5: the fifth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrkB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor foun

>cd05864 Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2)

Probab=97.82  E-value=1.5e-05  Score=64.85  Aligned_cols=58  Identities=28%  Similarity=0.344  Sum_probs=46.9

Q ss_pred             eeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       359 tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.|.+.|.|.|.++|.|+...+...   ........|.|..+...|+|.|+|.|.|..|.
T Consensus         2 ~~~c~v~G~P~P~v~W~k~g~~l~~~---~~~~~~~~L~I~~v~~~D~G~YtC~a~N~~G~   59 (70)
T cd05864           2 KIPVKYYGYPPPEVKWYKNGQLIVLN---HTFKRGVHLTIYEVTEKDAGNYTVVLTNPITK   59 (70)
T ss_pred             EEEeEEEEeCCCEEEEEECCEECCCC---CEEccCCEEEECcCCHHHCEEEEEEEEECCCc
Confidence            47899999999999998865555322   22334557999999999999999999999986

Ig2_VEGF-2: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-2 (KDR/Flk-1) is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF-A also interacts with VEGFR-1, which it binds more strongly than VEGFR-2. VEGFR-2 and -1 may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05855 Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of Trk receptor TrkB

Probab=97.75  E-value=3.2e-05  Score=64.59  Aligned_cols=60  Identities=25%  Similarity=0.427  Sum_probs=45.6

Q ss_pred             eeecccCCCCCeeeccCCceeecCCCCce---EE----ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        360 LRCIAIGYPIPVYTWSKGEVSIDGSDGHY---KL----TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       360 l~C~~~G~P~P~i~w~k~~~~l~~~~g~~---~~----~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.|.+.|+|.|.|+|.|+...|.......   ..    ...+.|.|..+...|+|.|+|.|.|..|.
T Consensus         3 i~~~v~G~P~Pti~W~kng~~l~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~   69 (79)
T cd05855           3 IPFTVKGNPKPTLQWFHEGAILNESEYICTKIHVINNTEYHGCLQLDNPTHLNNGIYTLVAKNEYGE   69 (79)
T ss_pred             EEEEEeEeCCCceEEEECCEECCCCcceeeeeEeecccceEEEEEECCCCcccCEEEEEEEEcCCcc
Confidence            46788999999999998776664322111   11    12347999999999999999999999997

TrkB_d5: the fifth domain of Trk receptor TrkB, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors, which mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. The Trks are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkB shares significant sequence homology and domain organization with TrkA, and TrkC. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. In some cell systems NT-3 can activate TrkA and TrkB receptors. TrKB transcripts are found throughout multiple structures of the central and peripheral nervous systems.

>KOG3513|consensus

Probab=97.73  E-value=0.00015  Score=85.10  Aligned_cols=89  Identities=29%  Similarity=0.460  Sum_probs=68.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCC-ceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g-~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ++.+..|+.+++.|.+.|.|.|.|+|.++..-+...+. .-....+|.|.|.++...|+|.|.|.|.|..|. ..+.+.|
T Consensus       340 d~~~~~gs~v~~eC~a~g~P~p~v~WlkNg~pl~~~~r~~~~~i~~g~L~is~v~~~dsg~YQC~A~Nk~G~-i~anA~L  418 (1051)
T KOG3513|consen  340 DTEADTGSNVTLECKASGKPNPTVKWLKNGEPLEPAERDPRYKIDDGTLIISNVQESDSGVYQCIAENKYGT-IYANAEL  418 (1051)
T ss_pred             eeEecCCCCeEEEEEecCCCCCceEEeeCCeecCccCCCcceEEeCCEEEEEecccccCeEEEeeeecccce-EeeeeEE
Confidence            34566789999999999999999999986554542221 224566789999999999999999999999998 7777777


Q ss_pred             eecccceeeee
Q psy10163        428 IVRGNYEQWYY  438 (615)
Q Consensus       428 ~V~~~~~~wyy  438 (615)
                      .|.+..+.+-.
T Consensus       419 ~V~a~~P~f~~  429 (1051)
T KOG3513|consen  419 KVLASAPVFPL  429 (1051)
T ss_pred             EEEccCCCCCC
Confidence            77665443333

>KOG4597|consensus

Probab=97.72  E-value=4.6e-05  Score=81.19  Aligned_cols=99  Identities=25%  Similarity=0.433  Sum_probs=80.8

Q ss_pred             cccCCCccCCCCCC----eeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCcccCCCCCCcccccccccCCC
Q psy10163         47 ICLQPAVIGDCANY----VLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASP  122 (615)
Q Consensus        47 ~C~~~~~~G~C~~~----~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~~v~~p  122 (615)
                      -|+- .+.|+|.+.    .-+|+||..-+.|++|...+|.||.++|++.+.|+..|....                    
T Consensus       314 e~~~-cdmgpC~g~~f~tew~~~~~aqcg~~~~~rsv~C~~s~~~~~p~E~C~~a~~sg~--------------------  372 (560)
T KOG4597|consen  314 ECLT-CDMGPCTGLTFVTEWSWHLDAQCGDCETTRSVVCKGSQGRFEPLEACLVACASGP--------------------  372 (560)
T ss_pred             hhcC-CCCcccCCccchhhhhhhcccccCCceeeeeeeecCccccccchhhhhhhccCCC--------------------
Confidence            3433 678888742    357889999999999999999999999999999999995321                    


Q ss_pred             CccCCCCCCccccccCceeeeeeccCCCCCCceeccCCCccccceecccCCCCCcccCCCCccCCcccccceEeecCCCc
Q psy10163        123 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFI  202 (615)
Q Consensus       123 p~~~~~~~C~~~~~~g~~v~l~C~~~~~p~p~~~~~~~~~~C~~~~~~~~~~~~~C~~p~~~G~C~~~~~r~yfd~~~~~  202 (615)
                                                                          ...|.++-..||| .+..||||.+-+ +
T Consensus       373 ----------------------------------------------------~pad~~pc~~GPC-~~e~rW~~s~ws-q  398 (560)
T KOG4597|consen  373 ----------------------------------------------------RPADTRPCAQGPC-PCEPRWAYSPWS-Q  398 (560)
T ss_pred             ----------------------------------------------------CCccccccccCCC-CCccceeecchh-h
Confidence                                                                1345667788999 999999999998 8


Q ss_pred             cccccCCCCccccchhcc
Q psy10163        203 TMPELTPNTFLFQWTCVI  220 (615)
Q Consensus       203 C~~f~~gN~NnF~s~C~~  220 (615)
                      |.-.=-||.|||+..|..
T Consensus       399 Cs~eCg~g~~~r~vica~  416 (560)
T KOG4597|consen  399 CSGECGGGGNNREVICAC  416 (560)
T ss_pred             hccccCCCCcceeEEEee
Confidence            886556899999999543

>cd07702 Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1)

Probab=97.70  E-value=3e-05  Score=63.49  Aligned_cols=59  Identities=22%  Similarity=0.282  Sum_probs=46.7

Q ss_pred             eeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       359 tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .|.|.+.|.|.|.+.|.|+...+.....++. ....+|.|.++...|+|.|+|.+.+...
T Consensus         2 ~l~c~v~g~P~P~v~W~kdg~~l~~~~~~~~-~~~~~L~I~~v~~~D~G~YtC~a~~~~~   60 (72)
T cd07702           2 RLTPKVKAFPAPEVIWLKDGLPAAEKCSRYH-VDGYSLVIKDVTEEDAGIYTILLGIKQY   60 (72)
T ss_pred             eEEeeEEEcCCCeEEEEECCEECCCCCcEEE-eCCCEEEECcCCHHHCEEEEEEEEcccc
Confidence            4789999999999999987655543334443 3455899999999999999999998643

Ig2_VEGFR-1: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1). VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-1 binds VEGF-A strongly; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-1 may play an inhibitory rolet in the function of VEGFR-2 by binding VEGF-A and interfering with its interaction with VEGFR-2. VEGFR-1 has a signaling role in mediating monocyte chemotaxis and may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05898 Ig5_KIRREL3 Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)

Probab=97.69  E-value=7.1e-05  Score=65.13  Aligned_cols=79  Identities=22%  Similarity=0.346  Sum_probs=58.2

Q ss_pred             CCcccccCCCeeeeeecccCCCCCe-eeccCCceeecC-CCCceEEecC-------CeEEEeeccccC-CceeeecCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDG-SDGHYKLTLD-------GVLQIVGLVRQD-AGIYVCVAANG  416 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~-~~g~~~~~~~-------gsl~I~~~~~~D-sG~Y~C~a~n~  416 (615)
                      +..+.+.+|+.+.|.|.+.+.|.|. |.|......++. ..++|.+...       ..|.|.++...| .|.|.|.|.|.
T Consensus         8 ~~s~~~~~G~~~~L~C~~~s~P~P~~i~W~w~~~~i~~~~~~r~~I~~~~~~~g~~S~L~I~~~~~~d~~g~Y~C~a~N~   87 (98)
T cd05898           8 EQVQYAVRGERGKVKCFIGSTPPPDRIAWAWKENVLESGTSERYTVERTSTGSGVLSTLTINNIMEADFQTHYNCTAWNS   87 (98)
T ss_pred             CceEEEeCCCcEEEEEEEccCCCCcEEEEEEccccccCCCCCCEEEEEEccCCCcEEEEEECCCccccCCcEEEEEEEeC
Confidence            4456788999999999999999884 677654445543 3578766532       268899998777 68999999999


Q ss_pred             CCccccccee
Q psy10163        417 IGDPIRKEFN  426 (615)
Q Consensus       417 ~G~p~~~~~~  426 (615)
                      +|. ....+.
T Consensus        88 ~G~-d~~~i~   96 (98)
T cd05898          88 FGS-GTAIIQ   96 (98)
T ss_pred             Ccc-ceEEEE
Confidence            997 344333

Ig5_KIRREL3: the fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1). These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development. Neph1 and 2 may mediate axonal guidance and synapse formation in certain areas of the CNS. In the kidney, they participate in the formation of the slit diaphragm.

>cd05873 Ig_Sema4D_like Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4D

Probab=97.69  E-value=4.9e-05  Score=64.65  Aligned_cols=67  Identities=19%  Similarity=0.310  Sum_probs=53.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .+.+.+|+.+.|.|.+.+ |.|.|.|.++...+..+.+++. ..++.|+|.++...|+|.|.|.+.+..
T Consensus         5 ~~~v~~G~~v~L~C~~~~-~~~~i~W~~ng~~i~~~~~r~~-~~~~~L~I~nv~~~DsG~Y~C~a~e~~   71 (87)
T cd05873           5 QRTFKLGNNAELKCSPKS-NLARVVWKFDGKVLTPESAKYL-LYRDGLLIFNASEADAGRYQCLSVEKS   71 (87)
T ss_pred             eEEEECCCCEEEEEECCC-CCCeEEEEECCEECCCCCceEE-EECCcEEEeCCCHHHCEEEEEEEEecc
Confidence            345678999999999764 7889999987666655445654 466889999999999999999988753

Ig_Sema4D_like; Immunoglobulin (Ig)-like domain of Sema4D. Sema4D is a Class IV semaphorin. Semaphorins are classified based on structural features additional to the Sema domain. Sema4D has extracellular Sema and Ig domains, a transmembrane domain, and a short cytoplasmic domain. Sema4D plays a part in the development of GABAergic synapses. Sema4D in addition is an immune semaphorin. It is abundant on resting T cells; its expression is weak on resting B cells and antigen presenting cells (APCs), but is upregulated by various stimuli. The receptor used by Sema4D in the immune system is CD72. Sem4D enhances the activation of B cells and DCs through binding CD72, perhaps by reducing CD72s inhibitory signals. The receptor used by Sema4D in the non-lymphatic tissues is plexin-B1. Sem4D is anchored to the cell surface but its extracellular domain can be released from the cell surface by a metalloproteas

>cd04979 Ig_Semaphorin_C Immunoglobulin (Ig)-like domain of semaphorin

Probab=97.67  E-value=6.5e-05  Score=63.76  Aligned_cols=79  Identities=20%  Similarity=0.295  Sum_probs=57.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCC---CCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS---DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~---~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.++...+...   ..++.. ..+.|.|.++...|+|.|.|.+.+..+......+
T Consensus         5 ~~~v~~g~~v~L~C~~~~-p~~~i~W~k~~~~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~   82 (89)
T cd04979           5 VVTVVEGNSVFLECSPKS-NLASVVWLFQGGPLQRKEEPEERLLV-TEDGLLIRSVSPADAGVYTCQSVEHGFKQTLATY   82 (89)
T ss_pred             EEEEECCCcEEEEEeCCC-CCceEEEEECCcccccccCcCceEEE-cCCCEEEccCCHHHCEEEEEEEecCccceeEeEE
Confidence            456778999999999987 88999998754443322   133333 3456999999999999999999876554455555


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus        83 ~l~V   86 (89)
T cd04979          83 SLNV   86 (89)
T ss_pred             EEEE
Confidence            5544

Ig_Semaphorin_C; Immunoglobulin (Ig)-like domain in semaphorins. Semaphorins are transmembrane protein that have important roles in a variety of tissues. Functionally, semaphorins were initially characterized for their importance in the development of the nervous system and in axonal guidance. Later they have been found to be important for the formation and functioning of the cardiovascular, endocrine, gastrointestinal, hepatic, immune, musculoskeletal, renal, reproductive, and respiratory systems. Semaphorins function through binding to their receptors and transmembrane semaphorins also serves as receptors themselves. Although molecular mechanism of semaphorins is poorly understood, the Ig-like domains may involve in ligand binding or dimerization.

>cd05882 Ig1_Necl-1 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3))

Probab=97.60  E-value=7.7e-05  Score=64.55  Aligned_cols=68  Identities=21%  Similarity=0.307  Sum_probs=51.4

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCce-eec------CCCCceEEe----cCCeEEEeeccccCCceeeecCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV-SID------GSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~-~l~------~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      ..+.+.+|+.+.|+|.+.+.|.|.|.|.+... ++.      ...+++.+.    ...+|.|.++...|+|.|+|.+..
T Consensus         5 ~~~tv~~G~tv~L~C~v~g~~~~~v~W~k~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~nV~~~D~G~YtC~~~t   83 (95)
T cd05882           5 QDETVAVGGTVTLKCGVKEHDNSSLQWSNTAQQTLYFGEKRALRDNRIQLVKSTPTELIISISNVQLSDEGEYTCSIFT   83 (95)
T ss_pred             ccEEEecCCcEEEEEEEeCCCCCeEEEeccCccEEEeCCeEEEeCCeEEEEeCCCceEEEEECCCCcccCEEEEEEEEe
Confidence            34678899999999999999999999977332 111      123455433    135899999999999999999765

Ig1_Necl-1: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-1, Necl-1 (also known as celll adhesion molecule 3 (CADM3), SynCAM2, IGSF4). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue, and is important to the format

>smart00408 IGc2 Immunoglobulin C-2 Type

Probab=97.58  E-value=0.00017  Score=55.29  Aligned_cols=63  Identities=37%  Similarity=0.596  Sum_probs=49.0

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +|+.++|.|.+.+.|.+.+.|.++...+.  ...........|.|..+...|+|.|.|.+.+..|
T Consensus         1 ~g~~~~l~C~~~~~~~~~v~W~~~~~~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g   63 (63)
T smart00408        1 EGQSVTLTCPAEGDPVPNITWLKDGKPLP--ESNRLSASGSTLTIKSVSLEDSGEYTCVAENSAG   63 (63)
T ss_pred             CCceEEEEeeCccCCCCeEEEEECCEECC--CCCEEecCCcEEEEeeCCcccCEEEEEEEecCCC
Confidence            47789999999999999999987544443  2233344556899999999999999999988654

>cd05750 Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain in neuregulins (NRGs)

Probab=97.57  E-value=8.7e-05  Score=60.40  Aligned_cols=62  Identities=29%  Similarity=0.549  Sum_probs=46.9

Q ss_pred             eeeeecccC-CCCCeeeccCCceeecCCCC--ceEEe---cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        358 VTLRCIAIG-YPIPVYTWSKGEVSIDGSDG--HYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       358 ~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g--~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ++|.|.+.| .|.|.+.|.++...+.....  .+.+.   ..+.|.|..+...|+|.|.|.|.|..|.
T Consensus         1 ~~l~C~~~g~~P~p~~~W~k~g~~l~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~   68 (75)
T cd05750           1 LVLKCEATSEYPSLRFKWFKDGKELNRKNKPRNIKIRNKKKNSELQINKAKLADSGEYTCVVENILGN   68 (75)
T ss_pred             CEEEEEccCCCCCceEEEEcCCeeccccCCcceEEEEecCceEEEEEccCCcccCeEEEEEEEEcCCc
Confidence            368999999 99999999886555532221  11121   2347899999999999999999999986

Ig_Pro_neuregulin: immunoglobulin (Ig)-like domain in neuregulins (NRGs). NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. There are four members of the neuregulin gene family (NRG1, -2, -3, and -4). The NRG-1 protein, binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. The other NRGs proteins bind one or the other or both of these ErbBs. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates processes such as target cell differentiation, and Schwann cell surv

>cd05729 Ig2_FGFR_like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor and similar proteins

Probab=97.55  E-value=0.00016  Score=59.90  Aligned_cols=68  Identities=28%  Similarity=0.468  Sum_probs=50.8

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEE----ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~----~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|.+.+.|.|.|.|.++...+... ..+..    .....|.|..+...|.|.|.|.+.|..|.
T Consensus         5 ~~~~G~~~~l~C~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~n~~g~   76 (85)
T cd05729           5 AVPAGSTVRLKCPASGNPRPTITWLKDGKPFKKE-HRIGGYKVRKKKWTLILESVVPSDSGKYTCIVENKYGS   76 (85)
T ss_pred             EecCCCcEEEEEEcCCCCCCeEEEEECCEECccc-CceeEEEccCcEEEEEEeECCcccCEEEEEEEEECCce
Confidence            4567889999999999999999998755443211 11111    11236888899999999999999998886

Ig2_FGFR_like: domain similar to the second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three Ig-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin

>KOG3513|consensus

Probab=97.51  E-value=0.00015  Score=85.11  Aligned_cols=83  Identities=36%  Similarity=0.562  Sum_probs=71.9

Q ss_pred             CCCcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       346 ~e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+..+.+..|..+++.|...+.|.|.+.|.|+.. .-...+++.+..+|+|.|.++...|+|.|+|.|.|.+|. ...+.
T Consensus       432 ~~~~~~a~~g~~v~i~C~~~asP~p~~~W~k~~~-~~~~~~r~~i~edGtL~I~n~t~~DaG~YtC~A~N~~G~-a~~~~  509 (1051)
T KOG3513|consen  432 VERKVMAVVGGTVTIDCKPFASPKPKVSWLKGGE-KLLQSGRIRILEDGTLEISNVTRSDAGKYTCVAENKLGK-AESTG  509 (1051)
T ss_pred             cceEEEEEeCCeEEEeeccCCCCcceEEEEcCCc-ccccCceEEECCCCcEEecccCcccCcEEEEEEEcccCc-cceEE
Confidence            4566788899999999999999999999998766 345779999999999999999999999999999999998 66665


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|+
T Consensus       510 ~L~Vk  514 (1051)
T KOG3513|consen  510 NLIVK  514 (1051)
T ss_pred             EEEEe
Confidence            55553

>cd05727 Ig2_Contactin-2-like Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=97.49  E-value=0.00014  Score=62.93  Aligned_cols=70  Identities=26%  Similarity=0.376  Sum_probs=55.0

Q ss_pred             ccccCCCeeeeeec-ccCCCCCeeeccCCceee--cCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCI-AIGYPIPVYTWSKGEVSI--DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~-~~G~P~P~i~w~k~~~~l--~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|..+.|.|. ..|.|.|.+.|-++...+  ..+..+++...+|.|.|.++...|+|.|+|.|.|.+..
T Consensus        13 ~~v~eG~~~~L~C~pP~g~P~p~~~W~k~~~~~~~~~d~r~~~~~~~G~L~fs~v~~~D~g~Y~C~A~n~~~~   85 (96)
T cd05727          13 VKVKEGWGVVLFCDPPPHYPDLSYRWLLNEFPNFIPEDGRRFVSQTNGNLYIAKVEASDRGNYSCFVSSPSST   85 (96)
T ss_pred             eeeeeCCcEEEeeCCCCCCCCCEEEEEECCcccccccCCCeEEeCCCCcEEEeecCHhhCceeEEEEEecccC
Confidence            56778999999995 568899999998764322  22233555556899999999999999999999997654

Ig2_Contactin-2-like: second Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>cd05754 Ig3_Perlecan_like Third immunoglobulin (Ig)-like domain found in Perlecan and similar proteins

Probab=97.43  E-value=0.00018  Score=60.40  Aligned_cols=66  Identities=26%  Similarity=0.486  Sum_probs=51.5

Q ss_pred             ccccCCCeeeeeecccC-CCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+ .|.|.|.|.+....+.   .+ .....+.|.|..+...|+|.|.|.+.|..|.
T Consensus        11 ~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~---~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~   77 (85)
T cd05754          11 QEVRPGADVSFICRAKSKSPAYTLVWTRVGGGLP---SR-AMDFNGILTIRNVQLSDAGTYVCTGSNMLDT   77 (85)
T ss_pred             eEEcCCCCEEEEEEcCCCCCCcEEEEEECCCcCC---Cc-ccccCCEEEECCCCHHHCEEEEEEEeccCCe
Confidence            45678999999999975 7999999976442221   11 2234578999999999999999999999886

Ig3_Perlecan_like: domain similar to the third immunoglobulin (Ig)-like domain found in Perlecan. Perlecan is a large multi-domain heparin sulfate proteoglycan, important in tissue development and organogenesis. Perlecan can be represented as 5 major portions; its fourth major portion (domain IV) is a tandem repeat of immunoglobulin-like domains (Ig2-Ig15), which can vary in size due to alternative splicing. Perlecan binds many cellular and extracellular ligands. Its domain IV region has many binding sites. Some of these have been mapped at the level of individual Ig-like domains, including a site restricted to the Ig5 domain for heparin/sulfatide, a site restricted to the Ig3 domain for nidogen-1 and nidogen-2, a site restricted to Ig4-5 for fibronectin, and sites restricted to Ig2 and to Ig13-15 for fibulin-2.

>cd05742 Ig1_VEGFR_like First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor (R) and similar proteins

Probab=97.40  E-value=0.00018  Score=60.25  Aligned_cols=65  Identities=23%  Similarity=0.396  Sum_probs=46.3

Q ss_pred             CCeeeeeecccCC--CCCeeeccCCceeec-C---CCCceE---EecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        355 GNFVTLRCIAIGY--PIPVYTWSKGEVSID-G---SDGHYK---LTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       355 g~~~tl~C~~~G~--P~P~i~w~k~~~~l~-~---~~g~~~---~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      |+.++|.|.+.|.  |.|.|.|.+....+. .   ......   ......|.|.++...|+|.|.|.+.|..|.
T Consensus         1 Ge~~~L~C~~~g~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~DsG~Y~C~a~n~~~~   74 (84)
T cd05742           1 GETLVLNCTVLTELNEGVDFQWTYPGKKRGRGKSMVTRQSLSEATELSSTLTIPNATLKDSGTYTCAASSGTMD   74 (84)
T ss_pred             CCeEEEEEEEEeCCCccEEEEEecCCcccCCceEeecccccccceEEEEEEEECCCChhhCEEEEEEEccCCCc
Confidence            5678999999999  889999975322111 0   000100   012247999999999999999999999886

Ig1_VEGFR_like: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R) related proteins. The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF-A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF

>cd05871 Ig_Semaphorin_classIII Immunoglobulin (Ig)-like domain of class III semaphorin

Probab=97.37  E-value=0.00025  Score=60.84  Aligned_cols=79  Identities=22%  Similarity=0.365  Sum_probs=55.6

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCc---eee-c-CCCCceEEecCCeEEEeeccccCCceeeecCC-CCCCccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE---VSI-D-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA-NGIGDPI  421 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~---~~l-~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~-n~~G~p~  421 (615)
                      ..+.+.+|+.++|.|.. +.|.|.|.|.+..   ... . ...+++. ..+++|.|..+.+.|+|.|.|.+. +..+. .
T Consensus         4 ~~~~~~eG~~v~L~C~~-~~p~p~v~Wykq~~g~~~~~~~~~~~r~~-~~~~~L~I~~~~~~DsG~Y~C~a~~~~~~~-~   80 (91)
T cd05871           4 KVVYGVENNSTFLECLP-KSPQASVKWLFQRGGDQRKEEVKTEERLI-HTERGLLLRSLQRSDAGVYTCTAVEHSFSQ-T   80 (91)
T ss_pred             eEEEEecCCcEEEEEEC-CCCCceEEEEEECCCCCccccccccccEE-EecCeEEEeeCChhHCEEEEEEEEccCCeE-E
Confidence            34567789999999996 6899999997521   111 1 1223443 456789999999999999999986 56664 4


Q ss_pred             ccceeeee
Q psy10163        422 RKEFNVIV  429 (615)
Q Consensus       422 ~~~~~l~V  429 (615)
                      ...+.|.|
T Consensus        81 ~~~~~l~v   88 (91)
T cd05871          81 LAKYTLHV   88 (91)
T ss_pred             EEEEEEEE
Confidence            44555554

Ig_Semaphorin_class III; Immunoglobulin (Ig)-like domain of class III semaphorins. Semaphorins are classified into various classes on the basis of structural features additional to the Sema domain. Class III semaphorins are a vertebrate class having a Sema domain, an Ig domain, a short basic domain, and are secreted. They have been shown to be axonal guidance cues and have a part in the regulation of the cardiovascular, immune and respiratory systems. Sema3A, the prototype member of this class III subfamily, induces growth cone collapse and is an inhibitor of axonal sprouting. In perinatal rat cortex as a chemoattractant, it functions to direct, for pyramidal neurons, the orientated extension of apical dendrites. It may play a role, prior to the development of apical dendrites, in signaling the radial migration of newborn cortical neurons towards the upper layers. Sema3A selectively inhibits vascula

>cd05861 Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b)

Probab=97.28  E-value=0.00039  Score=58.49  Aligned_cols=64  Identities=23%  Similarity=0.438  Sum_probs=44.4

Q ss_pred             CCeeeeeecccCCCCCeeeccCCceeecCCCC---ceEEe---cCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG---HYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g---~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      |+.++|.|.+.+.|.|.|.|.+..........   ...+.   ....|.|.++...|+|.|.|.+.+..+
T Consensus         1 Ge~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~DsG~Y~C~a~n~~~   70 (84)
T cd05861           1 GETITVNCIVQGNEVVDFSWTYPGKDIGKGIPEVEEVKVPATTLRSTLTFPHATVEDSGTYECAAHESTQ   70 (84)
T ss_pred             CCcEEEEEEEECCCccEEEEEECCccCCCCceEEEEEecCCcEEEEEEEECCCCcCCCEEEEEEEEECcc
Confidence            57889999999999999999752211111000   11111   123699999999999999999988654

Ig1_PDGFR-alphabeta: The first immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b). PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFRalpha binds to all three PDGFs, whereas the PDGFRbeta binds only to PDGF-B. PDGFRs alpha and beta have similar organization: an extracellular component with five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFRalpha and PDGFRbeta are essential for normal development.

>cd05752 Ig1_FcgammaR_like Frst immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins

Probab=97.25  E-value=0.00084  Score=55.79  Aligned_cols=58  Identities=22%  Similarity=0.380  Sum_probs=46.4

Q ss_pred             ccccCCCeeeeeecccCCCC-CeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~-P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+|+.++|.|.+.+.|. +.+.|.|+...+.        .....|.|.++ ..|+|.|.|.|.+.
T Consensus        10 ~~v~~G~~V~L~C~~~~~p~~~~~~W~kng~~l~--------~~~~~l~i~~~-~~dsG~Y~C~a~~~   68 (78)
T cd05752          10 TTIFQGEKVTLTCNGFNSPEQNSTQWYHNGKLLE--------TTTNSYRIRAA-NNDSGEYRCQTQGS   68 (78)
T ss_pred             eEeeCCCCEEEEEeCCCCCCCccEEEEECCEEee--------ccCCeEEEeec-ccCCEEeEEECCCC
Confidence            35668999999999999986 4699988655442        23457888888 99999999999875

Ig1_FcgammaR_like: domain similar to the first immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs). Interactions between IgG and FcgammaR are important to the initiation of cellular and humoral response. IgG binding to FcgammaR leads to a cascade of signals and ultimately to functions such as antibody-dependent-cellular-cytotoxicity (ADCC), endocytosis, phagocytosis, release of inflammatory mediators, etc. FcgammaR has two Ig-like domains. This group also contains FcepsilonRI, which binds IgE with high affinity.

>cd07701 Ig1_Necl-3 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))

Probab=97.18  E-value=0.0006  Score=58.87  Aligned_cols=68  Identities=22%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC-ceee--c----CCCCceEEe----cCCeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSI--D----GSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l--~----~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+. ..++  +    ...+++...    ...+|+|.++...|+|.|.|.+...
T Consensus         6 ~v~v~eG~~v~L~C~~~~~p~~~v~W~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~t~   84 (95)
T cd07701           6 NVTVVEGGTANLTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISISDVSLSDEGQYTCSLFTM   84 (95)
T ss_pred             eEEEecCCcEEEEEEEecCCceEEEEeCCCCeEEEEcCcccccCCCEEEEECCCCcEEEEECcCCcccCEEEEEEeEee
Confidence            46788999999999999999999999652 1111  1    134566543    2347999999999999999998764

Ig1_Necl-3: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-3, Necl-3 (also known as cell adhesion molecule 2 (CADM2), SynCAM2, IGSF4D). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region, belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-3 accumulates in central and peripheral nervous system tissue, and has been shown to selectively interact with oligodendrocytes.

>cd05757 Ig2_IL1R_like Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins

Probab=97.10  E-value=0.00049  Score=59.16  Aligned_cols=68  Identities=18%  Similarity=0.263  Sum_probs=53.0

Q ss_pred             ccccCCCeeeeeecccC-----CCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIG-----YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-----~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|....|.|++.+     +|.|.|.|.|+...+.....  .+...+.|.|..+...|+|.|+|.+.+..+.
T Consensus         5 ~~~~~g~~~~l~Cp~~~~~~~~~~~p~i~Wyk~~~~i~~~~~--~~~~~~~L~I~~v~~~DsG~YtC~~~n~~~~   77 (92)
T cd05757           5 QILFSTKGGKIVCPDLDDFKNENTLPPVQWYKDCKLLEGDRK--RFVKGSKLLIQNVTEEDAGNYTCKLTFTHNG   77 (92)
T ss_pred             EEEeeccCCEEECCChHHccCCCCCCcEEEeECCEECCCCcc--EEecCCEEEEeeCChhhCEEEEEEEEecCCC
Confidence            35667889999998764     36889999987766653332  2237789999999999999999999987665

Ig2_IL1R_like: domain similar to the second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three IG-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta. This group also contains ILIR-like 1 (IL1

>cd05895 Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1

Probab=97.06  E-value=0.00065  Score=55.68  Aligned_cols=62  Identities=29%  Similarity=0.576  Sum_probs=45.5

Q ss_pred             eeeeecccC-CCCCeeeccCCceeecCC---CCceEEe---cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        358 VTLRCIAIG-YPIPVYTWSKGEVSIDGS---DGHYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       358 ~tl~C~~~G-~P~P~i~w~k~~~~l~~~---~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.|+|.+.+ .|.|.+.|.++...+...   ..++.+.   ..++|.|.++...|+|.|.|.+.|..|.
T Consensus         1 ~~L~C~a~~~~p~~~~~W~~~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~N~~g~   69 (76)
T cd05895           1 LVLRCETVSEYPSLRFKWFKNGKEIGAKNKPDNKIKIRKKKKSSELQISKASLADNGEYKCMVSSKLGN   69 (76)
T ss_pred             CEEEEecccCCCCCceEEEECCcccccCCCCCceEEEEeCCcEEEEEECcCCcccCEEEEEEEEeCCCc
Confidence            368999874 688999998755444321   1223322   2357999999999999999999999886

Ig_Pro_neuregulin-1: immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1. There are many NRG-1 isoforms which arise from the alternative splicing of mRNA. NRG-1 belongs to the neuregulin gene family, which is comprised of four genes. This group represents NRG-1. NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, and heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. The NRG-1 protein binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates process

>KOG4194|consensus

Probab=96.94  E-value=0.0011  Score=73.19  Aligned_cols=83  Identities=27%  Similarity=0.432  Sum_probs=65.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCce--eecCCCCc-eEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV--SIDGSDGH-YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~--~l~~~~g~-~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .++....|..+-|.|.+.|.|.|.|.|+|+..  +....+.+ ++.-.+..+-|.++...|+|.|+|.|.|..|. .++.
T Consensus       620 ~dltl~tg~mArl~CaAtG~P~PeIawqkdggtdFPAA~eRRl~Vmpedd~f~Itnvk~eD~GiYtC~A~n~AG~-isan  698 (873)
T KOG4194|consen  620 EDLTLRTGQMARLECAATGHPRPEIAWQKDGGTDFPAARERRLHVMPEDDVFFITNVKIEDQGIYTCTAQNVAGQ-ISAN  698 (873)
T ss_pred             ccceeecccceeeeeeccCCCCcceeehhcCCCCCchhhhheeeecCCCCEEEEecccccccceeEEeeeccccc-eeec
Confidence            45667788999999999999999999998432  33323333 34456678999999999999999999999998 7777


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      ..|.|-+
T Consensus       699 AtL~V~e  705 (873)
T KOG4194|consen  699 ATLTVLE  705 (873)
T ss_pred             eEEEEec
Confidence            7776643

>cd05717 Ig1_Necl-1-3_like First (N-terminal) immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 - Necl-3 (also known as cell adhesion molecules CADM3, CADM1, and CADM2 respectively)

Probab=96.86  E-value=0.0025  Score=54.64  Aligned_cols=70  Identities=21%  Similarity=0.293  Sum_probs=51.7

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCC--ceee-c----CCCCceEEec----CCeEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKG--EVSI-D----GSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~--~~~l-~----~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.+.|.+.  ..++ .    ...+++....    ..+|+|.++...|+|.|.|.+...
T Consensus         5 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~p~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~   84 (95)
T cd05717           5 QDVTVVEGGTATLKCRVKNNDNSSLQWSNPNQQTLYFNDKRALRDNRIQLVNFSANELSISISNVSLSDEGRYTCSLYTM   84 (95)
T ss_pred             CcEEEcCCCCEEEEEEECCCCCceEEEeCCCCcEEEeccccccccCcEEEEcCCCCeeEEEEccCCcccCEEEEEEEecC
Confidence            456788999999999999999999999641  1111 1    1235665532    247999999999999999998765


Q ss_pred             C
Q psy10163        417 I  417 (615)
Q Consensus       417 ~  417 (615)
                      .
T Consensus        85 ~   85 (95)
T cd05717          85 P   85 (95)
T ss_pred             C
Confidence            3

Ig1_Necl-1-3_like: N-terminal immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 (also known as cell adhesion molecule 3 (CADM3)), Necl-2 (CADM1), and Necl-3 (CADM2). At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1, Necl-2, and Necl-3 have Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue, and is important to the form

>cd05753 Ig2_FcgammaR_like Second immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins

Probab=96.81  E-value=0.0015  Score=54.84  Aligned_cols=71  Identities=21%  Similarity=0.240  Sum_probs=52.0

Q ss_pred             cccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        351 EAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+|+.++|+|.+. +.|.+.+.|.|+...+..      ......|.|..+...|+|.|.|.+.+..+.-..+.+.+
T Consensus        10 ~V~~G~~vtL~C~~~~~~~~~~~~w~k~g~~~~~------~~~~~~l~I~~~~~~dsG~Y~C~~~~~~~~~~s~~~~i   81 (83)
T cd05753          10 VVFEGEPLVLRCHGWKNKPVYKVTYYRDGKAKKY------SHSNSNLSIPQATLSDSGSYHCSGIIGSYDYSSEPVSI   81 (83)
T ss_pred             eecCCCCEEEEeeCCCCCcceEEEEEECCeEccc------cCCCceEEECccCHHHCEEEEEEEEeCCceecCCCEEE
Confidence            467899999999986 466778999875433211      11245799999999999999999999887644444433

Ig2_FcgammaR_like: domain similar to the second immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs). Interactions between IgG and FcgammaR are important to the initiation of cellular and humoral response. IgG binding to FcgammaR leads to a cascade of signals and ultimately to functions such as antibody-dependent-cellular-cytotoxicity (ADCC), endocytosis, phagocytosis, release of inflammatory mediators, etc. FcgammaR has two Ig-like domains. This group also contains FcepsilonRI, which binds IgE with high affinity.

>KOG4802|consensus

Probab=96.75  E-value=0.0008  Score=70.83  Aligned_cols=47  Identities=32%  Similarity=0.870  Sum_probs=41.3

Q ss_pred             CCCCCCC-CCCCCc----CCCCCCCCCcccCCCccccCCCCCccCCcccCCC
Q psy10163        269 YKEGECR-PQPQNV----CADNCKDDADCTGQAKCCPNDCGYSCSNLFDITT  315 (615)
Q Consensus       269 ~k~g~Cp-~~~~~~----C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~~~~~  315 (615)
                      .|+|-|| ...+|+    |-..|..|-+|++..|||++|||.+|+.|.....
T Consensus        91 ~KqGdCPa~ekqSgfaaaCvesCqvD~ECpevqKCcssgCgptcqvPktl~k  142 (516)
T KOG4802|consen   91 VKQGDCPAPEKQSGFAAACVESCQVDHECPEVQKCCSSGCGPTCQVPKTLYK  142 (516)
T ss_pred             cCCCCCCCcccccchHHHHHHhhcccccCccchhcccCCCCCceeccccccc
Confidence            3899999 666774    9999999999999999999999999999976553

>PF00047 ig: Immunoglobulin domain The Prosite family only concerns antibodies and MHCs

Probab=96.54  E-value=0.0016  Score=51.06  Aligned_cols=58  Identities=33%  Similarity=0.532  Sum_probs=39.7

Q ss_pred             CCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecC-C----eEEEeeccccCCceeeecC
Q psy10163        355 GNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLD-G----VLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       355 g~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~-g----sl~I~~~~~~DsG~Y~C~a  413 (615)
                      |+.++|.|.+ .+.|.+.+.|.++...+... ........ .    .|.|..+...|+|.|+|.+
T Consensus         1 G~~v~L~C~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~v   64 (64)
T PF00047_consen    1 GSSVTLTCSVSSGPPPTTVTWSKNGQSLPEG-STTNRSTNSVSSTSRLTISNVTPEDSGTYTCVV   64 (64)
T ss_dssp             TSEEEEEEEEEESSSTSEEEEEETTTTTSEE-EEEEEEETTTEEEEEEEESSCTGGGTEEEEEEE
T ss_pred             CCeEEEEeecCCCCCCcEEEEEECCccccCc-ceeEeecccceeeeEEEEccCCHHHCEEEEEEC
Confidence            6789999999 88889999997643221100 11111111 1    2999999999999999974

; InterPro: IPR013151 Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain.; PDB: 1B6U_A 3O4O_C 3VH8_H 1BIH_A 2C9A_A 2V5Y_A 1BQH_K 2ATP_A 3B9K_A 1NEZ_H ....

>cd07690 Ig1_CD4 First immunoglobulin (Ig) domain of CD4

Probab=96.47  E-value=0.0045  Score=53.41  Aligned_cols=70  Identities=19%  Similarity=0.338  Sum_probs=48.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCc-e-eec---------C--CCCceEEe----cCC--eEEEeeccccCCceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGE-V-SID---------G--SDGHYKLT----LDG--VLQIVGLVRQDAGIYV  410 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~-~-~l~---------~--~~g~~~~~----~~g--sl~I~~~~~~DsG~Y~  410 (615)
                      |.+.+|+.++|.|.+.+.|.+.|.|.+.. . +++         .  ..+++...    ..+  +|.|.++...|+|+|.
T Consensus         2 v~~~~G~~VtL~C~~s~~~~~~i~W~~~~~k~~~g~~~~l~~~~~~~~~~r~~~~~~~~~~g~~~L~I~~l~~sDsgtY~   81 (94)
T cd07690           2 VLGKKGDTAELPCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRNLWDQGSFPLIIKNLKIEDSDTYI   81 (94)
T ss_pred             eEeeCCCCEEEEEEeCCCCCcEEEEEECCcEEccCcCCEEEEecccccCCCCceecccCCCCeEEEEECCCCHHHCEEEE
Confidence            45678999999999999999999996311 1 111         0  01121111    122  5999999999999999


Q ss_pred             ecCCCCCCc
Q psy10163        411 CVAANGIGD  419 (615)
Q Consensus       411 C~a~n~~G~  419 (615)
                      |.+.+..+.
T Consensus        82 C~v~~~~~~   90 (94)
T cd07690          82 CEVEDKKEE   90 (94)
T ss_pred             EEECCccce
Confidence            998886543

Ig1_CD4; first immunoglobulin (Ig) domain of CD4. CD4 and CD8 are the two primary co-receptor proteins found on the surface of T cells, and the presence of either CD4 or CD8 determines the function of the T cell. CD4 is found on helper T cells, where it is required for the binding of MHC (major histocompatibility complex) class II molecules, while CD8 is found on cytotoxic T cells, where it is required for the binding of MHC class I molecules. CD4 contains four immunoglobulin domains, with the first three included in this hierarchy. The fourth domain has a general Ig architecture, but has slight topological changes in the arrangement of beta strands relative to the other structures in this family and is not specifically included in the hierarchy.

>cd05741 Ig_CEACAM_D1_like First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) and similar proteins

Probab=96.45  E-value=0.0062  Score=51.49  Aligned_cols=73  Identities=26%  Similarity=0.367  Sum_probs=52.2

Q ss_pred             CCeeeeeecccCCCCCeeeccCCce-----ee-----------c-CCCCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSKGEV-----SI-----------D-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k~~~-----~l-----------~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      |+.++|.|.........|.|.+...     .+           . .-.++..+..+++|.|.++...|+|.|.|......
T Consensus         1 G~~VtL~c~~~~~~~~~i~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~l~~~DsG~Y~c~v~~~~   80 (92)
T cd05741           1 GESVTLPVSNLPENLQEITWYKGKDKSVEAEIASYIATNSTVFGPAYSGRETIYPNGSLLIQNLTKEDSGTYTLQIISTN   80 (92)
T ss_pred             CCcEEEEcccCCCCCEEEEEECCCCCCcceEEEEEecCCceeECCCcCCeEEEcCCceEEEccCCchhcEEEEEEEEcCC
Confidence            5788999988877777899966221     11           0 11256677778999999999999999999877665


Q ss_pred             Ccccccceee
Q psy10163        418 GDPIRKEFNV  427 (615)
Q Consensus       418 G~p~~~~~~l  427 (615)
                      +.....++.|
T Consensus        81 ~~~~~~~~~l   90 (92)
T cd05741          81 GVTENAKFFL   90 (92)
T ss_pred             CcEEEEEEEE
Confidence            6544444443

Ig_CEACAM_D1_like : immunoglobulin (IG)-like domain 1 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily-like. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surf

>smart00410 IG_like Immunoglobulin like

Probab=96.33  E-value=0.014  Score=47.11  Aligned_cols=69  Identities=33%  Similarity=0.617  Sum_probs=52.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCC-ceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+.+.+.+.|.+. ...+. ...++.+...   .+|.|.++...|.|.|.|.+.+..+.
T Consensus         4 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~v~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~v~~~~~~   76 (86)
T smart00410        4 VTVKEGESVTLSCEVSGSPPPEVTWYKQGGKLLA-ESGRFSVSRSGSNSTLTISNVTPEDSGTYTCAATNSSGS   76 (86)
T ss_pred             EEEeCCCeEEEEEEEccCCCCeEEEEECCCEEcC-CCCcEEEEEcCCeeEEEEEeeccccCeEEEEEEEcCCCe
Confidence            4566899999999999999999999764 33222 2344444444   57999999999999999999877665

IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.

>smart00409 IG Immunoglobulin

Probab=96.33  E-value=0.014  Score=47.11  Aligned_cols=69  Identities=33%  Similarity=0.617  Sum_probs=52.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCC-ceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+.+.+.+.|.+. ...+. ...++.+...   .+|.|.++...|.|.|.|.+.+..+.
T Consensus         4 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~v~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~v~~~~~~   76 (86)
T smart00409        4 VTVKEGESVTLSCEVSGSPPPEVTWYKQGGKLLA-ESGRFSVSRSGSNSTLTISNVTPEDSGTYTCAATNSSGS   76 (86)
T ss_pred             EEEeCCCeEEEEEEEccCCCCeEEEEECCCEEcC-CCCcEEEEEcCCeeEEEEEeeccccCeEEEEEEEcCCCe
Confidence            4566899999999999999999999764 33222 2344444444   57999999999999999999877665

>PF13895 Ig_2: Immunoglobulin domain; PDB: 2V5R_B 2V5M_A 2V5S_B 2GI7_A 3LAF_A 4DEP_C 3O4O_B 2EC8_A 2E9W_A 1J87_A

Probab=96.30  E-value=0.0037  Score=50.78  Aligned_cols=61  Identities=38%  Similarity=0.629  Sum_probs=47.0

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|.+.++|.+.+.|.++...+..        ....+.|..+...|.|.|.|.+.++.+.
T Consensus        10 ~v~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~--------~~~~~~~~~~~~~~~g~y~C~~~~~~~~   70 (80)
T PF13895_consen   10 SVEEGDSVTLTCSVSGNPPPQVQWYKNGSPINS--------SQNGLFIPNVSPEDSGNYTCRASNGSGS   70 (80)
T ss_dssp             EEETTSEEEEEEEEESSSSSEEEEEETTEEEEE--------ESSEEEESSEEGGGTEEEEEEEEETTEE
T ss_pred             EEeCCCcEEEEEEEEcccceeeeeeeeeeeeee--------eeeeeeeeeeccccCEEEEEEEEeCCCC
Confidence            466899999999999999999999876544431        1222566778889999999999886553

...

>PHA02826 IL-1 receptor-like protein; Provisional

Probab=96.26  E-value=0.005  Score=61.95  Aligned_cols=65  Identities=22%  Similarity=0.332  Sum_probs=49.9

Q ss_pred             cccCCCeeeeeeccc-----CCCCCeeeccCCceeecCCCCceEEecC-CeEEEeeccccCCceeeecCCCC
Q psy10163        351 EAEEGNFVTLRCIAI-----GYPIPVYTWSKGEVSIDGSDGHYKLTLD-GVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~-----G~P~P~i~w~k~~~~l~~~~g~~~~~~~-gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+|..++|.|.+.     +.|.|.|+|.|+...+. ...++.+..+ +.|.|.++...|+|.|.|.+.-.
T Consensus       140 ~~~~G~~v~L~C~~~~~~~~~~p~p~I~WyKng~~l~-~~~r~~~~~~~~~L~I~~V~~~DsG~YtC~a~~~  210 (227)
T PHA02826        140 QFNSGKDSKLHCYGTDGISSTFKDYTLTWYKNGNIVL-YTDRIQLRNNNSTLVIKSATHDDSGIYTCNLRFN  210 (227)
T ss_pred             eEecCCCEEEEeeCCCCccccCCCceEEEEECCEECC-CCCCEEEeCCCCEEEECcCCHHhCEEEEEEEEEe
Confidence            456789999999986     45789999988665554 2345554443 47999999999999999998754

>KOG4221|consensus

Probab=95.98  E-value=0.015  Score=69.09  Aligned_cols=66  Identities=29%  Similarity=0.452  Sum_probs=58.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      ..+.+|+.++|.|-+.|.|.|.|.|-++...+..+.-++++...++|.|.++...|+|.|+|.|.|
T Consensus       247 ~~v~~g~~v~leCvvs~~p~p~v~Wlrng~~i~~ds~rivl~g~~slliS~a~~~dSg~YtC~Atn  312 (1381)
T KOG4221|consen  247 AVVVEGDDVVLECVVSGVPKPSVKWLRNGEKISVDSYRIVLVGGSSLLISNATDDDSGKYTCRATN  312 (1381)
T ss_pred             cccccCCcEEEEEEecCCCCCceEEeeCCeeeeecceEEEEecccceEEeccccccCceEEEEecC
Confidence            356689999999999999999999988776666555677778788999999999999999999998

>PHA02826 IL-1 receptor-like protein; Provisional

Probab=95.93  E-value=0.0085  Score=60.30  Aligned_cols=80  Identities=24%  Similarity=0.284  Sum_probs=56.1

Q ss_pred             cccccCCCeeeeeecccCCCC-----------CeeeccCCceee---cCCCC--------ceEEecCCeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI-----------PVYTWSKGEVSI---DGSDG--------HYKLTLDGVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~-----------P~i~w~k~~~~l---~~~~g--------~~~~~~~gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.+.|+|.+.+.|.           +.|.|.|.....   +.+..        .-....+++|.|.++...|+
T Consensus        31 ~~~v~eGe~v~L~C~~~~~~~~~~~~~~~~~~~~V~W~k~~s~~~v~~~~~~~~~~~i~~~~~~~r~~~L~I~~v~~~Ds  110 (227)
T PHA02826         31 PVYAKFGDPMVLLCTGKHYKKSIFFDKTFITSYNVTWSKTDSLAFVRDSGARTKIKKITHNEIGDRSENLWIGNVINIDE  110 (227)
T ss_pred             eEEecCCCCEEEEccccccccccccccccCCCccEEEEeCCeEEEEEcCCCccccccccccceecCCCeEEECCCChHHC
Confidence            467789999999999988654           489998854331   11111        00012356899999999999


Q ss_pred             ceeeecCCCCCCcccccceeeee
Q psy10163        407 GIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       407 G~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      |.|+|.+.|..+. ....+.|.|
T Consensus       111 G~Y~C~a~N~~~~-~~~~i~L~V  132 (227)
T PHA02826        111 GIYICTISSGNIC-EESTIRLTF  132 (227)
T ss_pred             EEEEEEEEECCcc-eEEEEEEEE
Confidence            9999999998775 444455555

>cd05862 Ig1_VEGFR First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R)

Probab=95.88  E-value=0.013  Score=49.54  Aligned_cols=65  Identities=22%  Similarity=0.287  Sum_probs=43.5

Q ss_pred             CCeeeeeecccCCCCC--eeeccCCceee---cCCCC-ceE----EecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        355 GNFVTLRCIAIGYPIP--VYTWSKGEVSI---DGSDG-HYK----LTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P--~i~w~k~~~~l---~~~~g-~~~----~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      |+.++|.|.+.++|.+  .+.|......+   ..... +..    ......|.|.++...|+|.|+|.|.|..|.
T Consensus         1 Ge~~~L~C~~~~~~~~~~~~~W~~p~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~DsG~Y~C~a~n~~~~   75 (86)
T cd05862           1 GEKLVLNCTARTELNVGIDFQWDYPGKKEQRAKSVSENRRSLQEHTELSSTLTIENVTLSDLGRYTCTASSGQMI   75 (86)
T ss_pred             CCcEEEEEEEEeCCCCcEEEEEEcCCcccccceecccccccccccceeeeEEEEecCCcccCEEEEEEEeecceE
Confidence            5678999999987644  67996532211   00010 111    112347999999999999999999998775

IG1_VEGFR: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF_A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angioge

>PHA02785 IL-beta-binding protein; Provisional

Probab=95.86  E-value=0.013  Score=62.26  Aligned_cols=76  Identities=24%  Similarity=0.373  Sum_probs=54.9

Q ss_pred             cccccCCCeeeeeecc-----cCCCCCeeeccCCceeecCCCCceEEecCC-eEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        349 TVEAEEGNFVTLRCIA-----IGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~-----~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g-sl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      ...+.+|+.+.|+|.+     .|.|.|.|+|.|+...    ..+......+ .|.|..+...|+|.|.|.+.|..|. ..
T Consensus        35 ~~~~~~ge~~~l~C~~~~~~~~g~p~~~i~W~K~g~~----~~~~~~~~~g~~l~i~~~~~~DsG~Y~C~a~N~~g~-~~  109 (326)
T PHA02785         35 SFMELENEPVILPCPQINTLSSGYNILDILWEKRGAD----NDRIIPIDNGSNMLILNPTQSDSGIYICITKNETYC-DM  109 (326)
T ss_pred             hhhhhcCCCEEEECCCccccccCCCCceEEEEECCCc----cceEEEccCCceEEEcccCcccCeEEEEEEECCCcc-eE
Confidence            3456689999999997     6999999999985321    1123333344 4778888999999999999999875 34


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.|.|
T Consensus       110 ~s~~L~V  116 (326)
T PHA02785        110 MSLNLTI  116 (326)
T ss_pred             EEEEEEE
Confidence            4444444

>cd05896 Ig1_IL1RAPL-1_like First immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1)

Probab=95.78  E-value=0.025  Score=49.57  Aligned_cols=71  Identities=18%  Similarity=0.186  Sum_probs=51.5

Q ss_pred             cccccCCCeeeeeeccc-----------CCCCCeeeccCCceeecCCC-----CceEEecCCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAI-----------GYPIPVYTWSKGEVSIDGSD-----GHYKLTLDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-----------G~P~P~i~w~k~~~~l~~~~-----g~~~~~~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.+.|+|.+.           ....-.|+|-|+..-+..+.     +..+...+..|.|..+..+|+|.|+|.
T Consensus         9 ~~~~~~GE~v~l~C~~~~~~~~~~~~~~~~~~~~v~WyK~~~~~~~~~~~~~~~~Ri~~~~~~Lwf~Pa~~eDSG~Y~C~   88 (104)
T cd05896           9 KYMVLAGEPVRIKCALFYGYIRTNYSMAQSAGLSLMWYKSSGDGEEPIEIIFDGVRMSKEEDSIWFRPAELQDSGLYTCV   88 (104)
T ss_pred             eEEEcCCCeEEEECCCccccccccccccccCCceEEEEECCCCCCCCCcccccceeEEEeCCEEEEEeCChhhCeEEEEE
Confidence            46788999999999873           22344789987642222111     234566778999999999999999999


Q ss_pred             CCCCCCc
Q psy10163        413 AANGIGD  419 (615)
Q Consensus       413 a~n~~G~  419 (615)
                      +.|+...
T Consensus        89 ~rN~t~C   95 (104)
T cd05896          89 LRNSTYC   95 (104)
T ss_pred             ECCCCcc
Confidence            9988654

Ig1_ IL1RAPL-1_like: domain similar to the first immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1). IL-1 alpha and IL-1 beta are cytokines which participates in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three Ig-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of

>cd05774 Ig_CEACAM_D1 First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=95.64  E-value=0.031  Score=49.28  Aligned_cols=67  Identities=22%  Similarity=0.320  Sum_probs=49.9

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCce------e--ecC----------CCCceEEecCCeEEEeeccccCCceeeec
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEV------S--IDG----------SDGHYKLTLDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~------~--l~~----------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+|+.++|.|.......-.|+|.|+..      +  +..          -.|+..+..+|+|.|.++...|+|.|.|.
T Consensus         9 ~~~~G~~V~L~v~~~p~~~~~~~W~kg~~~~~~~~I~~y~~~~~~~~~gp~~~gR~~~~~ngSL~I~~v~~~D~G~Y~~~   88 (105)
T cd05774           9 QVAEGENVLLLVHNLPENLLAYAWYKGKTVSPNFLIASYIISTNSSTPGPAYSGRETIYPNGSLLIQNVTQKDTGFYTLQ   88 (105)
T ss_pred             cccCCCCEEEEecCCCCCceEEEEEcCCCCCCCEEEEEEECCCcccccCcccCCcEEEeCCCcEEEecCCcccCEEEEEE
Confidence            35589999999876554445899987521      1  111          13777888899999999999999999998


Q ss_pred             CCCCC
Q psy10163        413 AANGI  417 (615)
Q Consensus       413 a~n~~  417 (615)
                      ..+..
T Consensus        89 v~~~~   93 (105)
T cd05774          89 TITTN   93 (105)
T ss_pred             EEeCC
Confidence            76654

IG_CEACAM_D1: immunoglobulin (Ig)-like domain 1 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the D

>KOG4222|consensus

Probab=95.64  E-value=0.017  Score=68.19  Aligned_cols=83  Identities=33%  Similarity=0.551  Sum_probs=62.9

Q ss_pred             CCcccccCCCeeeeeecccCCCCCeeeccCCc--eeecCCCCceEEecCCeEEEeec-----cccCCceeeecCCCCCCc
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE--VSIDGSDGHYKLTLDGVLQIVGL-----VRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~--~~l~~~~g~~~~~~~gsl~I~~~-----~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..++.+.-++.++|.|.+.|.|.|+|.|-|+.  ++.+-...+.+++.+|+|.+..+     ...|.|.|.|.|+|.+|.
T Consensus        38 p~d~vvs~~~patlnc~asG~ppPti~w~k~G~~~~~~e~~shR~~lp~gsLf~l~~ahg~~a~~d~G~y~cvasn~~g~  117 (1281)
T KOG4222|consen   38 PHDLVVSKGEPATLNCKASGDPPPTIEWYKDGENVFKGEPGSHRFLLPDGSLFLLRLAHGKKAGHDHGVYSCVASNRLGE  117 (1281)
T ss_pred             chhhhccCCCCceeecCCCCCCCCceecccCCcccCCCCCCCcceecCCccEEEEecccCCcccCCCceeEeeecCccce
Confidence            34556677889999999999999999998743  33333445667788888877765     234999999999999998


Q ss_pred             ccccceeeee
Q psy10163        420 PIRKEFNVIV  429 (615)
Q Consensus       420 p~~~~~~l~V  429 (615)
                      .+.....|.+
T Consensus       118 avSr~a~L~v  127 (1281)
T KOG4222|consen  118 AVSRGASLIV  127 (1281)
T ss_pred             eeecCceEEE
Confidence            7777655543

>PHA02785 IL-beta-binding protein; Provisional

Probab=95.37  E-value=0.02  Score=60.84  Aligned_cols=71  Identities=20%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             cccccCCCeeeeeecccCCCCC---eeeccCCceeecCC----CCceEEe-----------cCCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP---VYTWSKGEVSIDGS----DGHYKLT-----------LDGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P---~i~w~k~~~~l~~~----~g~~~~~-----------~~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|..++|.|.+.|.|.|   .|.|.++...++..    .+++.+.           ..+.|.|..+...|+|.|.
T Consensus       229 ~~~~~~G~~v~L~C~a~g~P~~~~~~v~W~kng~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~V~~~D~G~Y~  308 (326)
T PHA02785        229 GVVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDEDGDGRISVANKIYTTDKRRVITSRLNINPVKEEDATTFT  308 (326)
T ss_pred             cEEecCCCcEEEEEEEECCCCCCCceEEEEECCEECCCcCCCCceeEEEecCccccccceeeeEEEEECCcchhcCeeeE
Confidence            3455679999999999999874   89998866555321    2333322           1357999999999999999


Q ss_pred             ecCCCCCCc
Q psy10163        411 CVAANGIGD  419 (615)
Q Consensus       411 C~a~n~~G~  419 (615)
                      |.|.|..|.
T Consensus       309 C~A~n~~~~  317 (326)
T PHA02785        309 CMAFTIPSI  317 (326)
T ss_pred             EEEEeccCc
Confidence            999998764

>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan

Probab=95.37  E-value=0.041  Score=49.05  Aligned_cols=76  Identities=28%  Similarity=0.383  Sum_probs=50.5

Q ss_pred             CCeeeeeecccCCC------------CCeeeccCCc-----eeec---------CC-CCceEEec------CCeEEEeec
Q psy10163        355 GNFVTLRCIAIGYP------------IPVYTWSKGE-----VSID---------GS-DGHYKLTL------DGVLQIVGL  401 (615)
Q Consensus       355 g~~~tl~C~~~G~P------------~P~i~w~k~~-----~~l~---------~~-~g~~~~~~------~gsl~I~~~  401 (615)
                      |+.++|.|......            .+.|.|.|..     .++.         .. .+|+.+..      +.+|+|.++
T Consensus         2 G~~VtLpC~~~~~~~~~~~~~~~~~~~~~I~W~k~~~g~~~~ii~~~~~~~~~~~~f~~R~sl~~~~~~~~~asL~I~nl   81 (112)
T cd05900           2 GSSLLIPCYFQDPIAKDPGAPTVAPLSPRIKWSFISKEKESVLLVATEGKVRVNTEYLDRVSLPNYPAIPSDATLEITEL   81 (112)
T ss_pred             CCcEEEeeEEeCCcCccccccccCCCCCEEEEEEecCCCccEEEEEECCeEEECccccCeEEecccCCCCCCcEEEEeec
Confidence            77899999776543            4689997631     2221         11 14555432      458999999


Q ss_pred             cccCCceeeecCCCCCCcccccceeeeecc
Q psy10163        402 VRQDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       402 ~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      ...|+|.|.|....+... -...+.|.|+|
T Consensus        82 ~~sDsG~Y~C~V~~g~~~-~~~~v~l~v~g  110 (112)
T cd05900          82 RSNDSGTYRCEVMHGIED-NYDTVEVQVKG  110 (112)
T ss_pred             ccccCEEEEEEEecCCCC-ceeEEEEEEEe
Confidence            999999999998876555 34445555554

Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.

>KOG4222|consensus

Probab=95.32  E-value=0.031  Score=66.10  Aligned_cols=90  Identities=29%  Similarity=0.492  Sum_probs=67.1

Q ss_pred             cccccCCCeeeeeec-ccCCCCCeeeccCCceeec-CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        349 TVEAEEGNFVTLRCI-AIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~-~~G~P~P~i~w~k~~~~l~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ++++..|+.++|.|. -.|.|.|.+.|.|+...++ .....+.+..+|.|.|.++...|+|.|.|++.|.+|.-.+....
T Consensus       140 d~~~a~ge~avlEcgpP~ghpeptvSw~Kdg~pl~~~~~~~~~lisgG~LlIsnvrksD~GtY~CVatNmvG~ReS~~A~  219 (1281)
T KOG4222|consen  140 DVQAAVGEEAVLECGPPRGHPEPTVSWVKDGKPLDHYDVPIIALISGGNLLISNVRKSDEGTYACVATNMVGERESIPAR  219 (1281)
T ss_pred             cccccccceeEEeccCCCCCCCCcceeecCCCccccccceeEEEecCCcEEEeccccCCCceeeeeecccccccccccce
Confidence            466677899999995 4599999999988554444 34567778899999999999999999999999999973333333


Q ss_pred             eeecccceeeeeeC
Q psy10163        427 VIVRGNYEQWYYDR  440 (615)
Q Consensus       427 l~V~~~~~~wyyd~  440 (615)
                      |.|  ....||...
T Consensus       220 lsv--~e~P~f~~r  231 (1281)
T KOG4222|consen  220 LSV--QEKPWFWKR  231 (1281)
T ss_pred             eee--ccCCccccc
Confidence            333  334455433

>cd05714 Ig_CSPGs_LP Immunoglobulin (Ig)-like domain of chondroitin sulfate proteoglycans (CSPGs), human cartilage link protein (LP) and similar proteins

Probab=95.24  E-value=0.028  Score=49.06  Aligned_cols=76  Identities=33%  Similarity=0.415  Sum_probs=50.3

Q ss_pred             CCeeeeeecccCCC------CCeeeccCCc-------eeecCCC----------CceEE----ecCCeEEEeeccccCCc
Q psy10163        355 GNFVTLRCIAIGYP------IPVYTWSKGE-------VSIDGSD----------GHYKL----TLDGVLQIVGLVRQDAG  407 (615)
Q Consensus       355 g~~~tl~C~~~G~P------~P~i~w~k~~-------~~l~~~~----------g~~~~----~~~gsl~I~~~~~~DsG  407 (615)
                      |+.++|.|.....+      .+.|.|.|..       .++-...          ++..+    ..+.+|+|.++...|+|
T Consensus         2 G~~V~L~C~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~sD~G   81 (106)
T cd05714           2 GGNVTLPCRFHLEPALSAPHGPRIKWTKLESDGAKEVDVLVAIGGRVKVYGSGRVRVPLYPADPGDASLVITDLRLEDSG   81 (106)
T ss_pred             CCCEEEeEEeECCcccCCCCCcEEEEEEeCCCCCceEEEEEEcCCEEEEcCCCceEEEeeCCCCCcceEEECCCCHHHCE
Confidence            67899999876653      5689997641       1111011          11111    12458999999999999


Q ss_pred             eeeecCCCCCCcccccceeeeecc
Q psy10163        408 IYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       408 ~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|.|...++.+. ....+.|.|++
T Consensus        82 ~Y~C~v~~~~~~-~~~~v~L~V~~  104 (106)
T cd05714          82 RYRCEVIDGIED-EQDTVELEVRG  104 (106)
T ss_pred             EEEEEEEcCCCc-eEEEEEEEEEE
Confidence            999998877665 45666677755

Ig_CSPGs_LP: immunoglobulin (Ig)-like domain similar to that found in chondroitin sulfate proteoglycans (CSPGs) and human cartilage link protein (LP). Included in this group are the CSPGs aggrecan, versican, and neurocan. In CSPGs this Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggrecan and versican have a wide distribution in connective tissue and extracellular matrices. Neurocan is localized almost exclusively in nervous tissue.

>cd05885 Ig2_Necl-4 Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4))

Probab=95.16  E-value=0.041  Score=45.99  Aligned_cols=61  Identities=18%  Similarity=0.409  Sum_probs=44.0

Q ss_pred             eeeeeccc-CCCCCeeeccCCceeecCC-----CCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        358 VTLRCIAI-GYPIPVYTWSKGEVSIDGS-----DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       358 ~tl~C~~~-G~P~P~i~w~k~~~~l~~~-----~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.|.|.+. ++|.+.|+|.++...|...     .++ .+...++|.+......|.+.|+|-|.|..+.
T Consensus         2 ~~L~C~s~~skP~a~i~W~k~~~~l~~~~~~~~~~~-~~t~~s~L~~~~~~~Ddg~~~~C~A~n~a~~   68 (80)
T cd05885           2 VELTCLSPRSKPAATLRWYRDRKELKGVISQQENGK-TVSVSNTIRFPVDRKDDGAILSCEASHPALV   68 (80)
T ss_pred             EEEEEeCCCccCCCeEEEEECCEECCCCcccccCCc-eEEEEEEEEEEeeeccCCcEEEEEEEChhhC
Confidence            56889765 8899999998876666331     111 1223456777777888888999999998775

Ig2_Necl-4: second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4)). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1-Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Ig domains are likely to participate in ligand binding and recognition. Necl-4 is expressed on Schwann cells, and plays a key part in initiating peripheral nervous system (PNS) myelination. In injured peripheral nerve cells, the mRNA signal for both Necl-4 and Necl-5 was observed to be elevated. Necl-4 participates in cell-cell adhesion and is proposed to play a role in tumor suppression.

>cd05759 Ig2_KIRREL3-like Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)

Probab=95.12  E-value=0.054  Score=44.86  Aligned_cols=60  Identities=27%  Similarity=0.409  Sum_probs=36.9

Q ss_pred             eeeeecccC-CCCCeeeccCCceeecCCCCceEEecCC-------eEEEeeccccCCceeeecCCCCC
Q psy10163        358 VTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTLDG-------VLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       358 ~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g~~~~~~~g-------sl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      +.|.|.+.| .|.|.|+|.++...+...........++       .|.|......|.+.|.|.+.+..
T Consensus         2 ~~L~C~v~g~~P~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~~~y~C~a~n~~   69 (82)
T cd05759           2 YNLTCRARGAKPAAEIIWFRDGEVLDGATYSKELLKDGKRETTVSTLPITPSDHDTGRTFTCRARNEA   69 (82)
T ss_pred             EEEEEEEeCccCCCEEEEEECCEEccCceeeeeEecCCCeEEEEEEEEEeCceecCCCEEEEEEcCcc
Confidence            578999987 6999999987655443211111111122       34444444556779999998764

Ig2_KIRREL3-like: domain similar to the second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1), Kirrel2 (Neph3), and Drosophila RST (irregular chiasm C-roughest) protein. These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development.

>cd05877 Ig_LP_like Immunoglobulin (Ig)-like domain of human cartilage link protein (LP)

Probab=95.10  E-value=0.034  Score=48.50  Aligned_cols=77  Identities=31%  Similarity=0.400  Sum_probs=52.5

Q ss_pred             CCCeeeeeecccCCC------CCeeeccCCc-------e-eec-C--------CCCceEEec----CCeEEEeeccccCC
Q psy10163        354 EGNFVTLRCIAIGYP------IPVYTWSKGE-------V-SID-G--------SDGHYKLTL----DGVLQIVGLVRQDA  406 (615)
Q Consensus       354 eg~~~tl~C~~~G~P------~P~i~w~k~~-------~-~l~-~--------~~g~~~~~~----~gsl~I~~~~~~Ds  406 (615)
                      .|+.++|.|.....|      ...|.|.|..       . ++. .        -.+++.+..    +.+|+|.++...|+
T Consensus         1 ~G~~vtL~C~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~Ds   80 (106)
T cd05877           1 RGGNVTLPCRYHYEPELSAPRKIRVKWTKLESDYLKEEDVLVAIGTRHKSYGSYQGRVFLRRAHDLDASLVITDLRLEDY   80 (106)
T ss_pred             CCCcEEEEeEeECCCcCCCCccceEEEEEecCCCCeeEEEEEEcCcEEEeccCccCcEEecCCCCCcEEEEEccCChHHC
Confidence            377899999876553      4569997631       1 111 0        124555432    34799999999999


Q ss_pred             ceeeecCCCCCCcccccceeeeecc
Q psy10163        407 GIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       407 G~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      |.|.|...++.+. ....+.|.|++
T Consensus        81 G~Y~C~v~~~~~~-~~~~~~l~v~~  104 (106)
T cd05877          81 GRYRCEVIDGLED-ESVVVALRLRG  104 (106)
T ss_pred             EEEEEEEEecccc-eEEEEEEEEEE
Confidence            9999998887776 56667777764

Ig_LP_like: immunoglobulin (Ig)-like domain similar to that that found in human cartilage link protein (LP). In cartilage, chondroitin-keratan sulfate proteoglycan (CSPG), aggrecan, forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.

>cd05775 Ig_SLAM-CD84_like_N N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like

Probab=94.97  E-value=0.037  Score=47.81  Aligned_cols=77  Identities=30%  Similarity=0.283  Sum_probs=51.2

Q ss_pred             cCCCeeeeeecccC-CCCCeeeccCCceee--cCC----------C----CceEEec-CCeEEEeeccccCCceeeecCC
Q psy10163        353 EEGNFVTLRCIAIG-YPIPVYTWSKGEVSI--DGS----------D----GHYKLTL-DGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       353 ~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l--~~~----------~----g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+|+.++|.|.... .....|.|.+....+  ...          .    +++.+.. +.+|.|.++...|+|.|.|-..
T Consensus         2 ~~G~sVtL~c~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~f~~R~~~~~~~~sL~I~~~~~~DsG~Y~c~v~   81 (97)
T cd05775           2 ILGGSVTLPLNIPDGTEIESITWSFNTSLAIITPGEETAPEIIVTDPSYKERVNFSQNDYSLQISNLKMEDAGSYRAEIN   81 (97)
T ss_pred             ccCCeEEEeCCCCCCcEEEEEEEecCCEeEEEecCCCCCCccEEeCCCceeeEEecCCceeEEECCCchHHCEEEEEEEE
Confidence            46899999998765 556688997643221  111          1    2333333 3689999999999999999877


Q ss_pred             CCCCcccccceeeee
Q psy10163        415 NGIGDPIRKEFNVIV  429 (615)
Q Consensus       415 n~~G~p~~~~~~l~V  429 (615)
                      ...|.....++.|.|
T Consensus        82 ~~~~~~~~~~f~L~v   96 (97)
T cd05775          82 TKNGVTITKEFTLHI   96 (97)
T ss_pred             cCCCCeEEEEEEEEe
Confidence            665665555555443

Ig_SLAM-CD84_like_N: The N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like. The SLAM family is a group of immune-cell specific receptors that can regulate both adaptive and innate immune responses. Members of this group include proteins such as CD84, SLAM (CD150), Ly-9 (CD229), NTB-A (ly-108, SLAM6), 19A (CRACC), and SLAMF9. The genes coding for the SLAM family are nested on chromosome 1, in humans at 1q23, and in mice at 1H2. The SLAM family is a subset of the CD2 family, which also includes CD2 and CD58 located on chromosome 1 at 1p13 in humans. In mice, CD2 is located on chromosome 3, and there is no CD58 homolog. The SLAM family proteins are organized as an extracellular domain with either two or four Ig-like domains, a single transmembrane segment, and a cytoplasmic region

>cd05897 Ig2_IL1R2_like Second immunoglobulin (Ig)-like domain of interleukin-1 receptor-2 (IL1R2)

Probab=94.85  E-value=0.041  Score=47.56  Aligned_cols=68  Identities=18%  Similarity=0.206  Sum_probs=48.3

Q ss_pred             ccCCCeeeeeecc-c----CCCCCeeeccCCceeecCCCCceEEe-cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIA-I----GYPIPVYTWSKGEVSIDGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~-~----G~P~P~i~w~k~~~~l~~~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..++....|.|+. .    .++.|.|+|-|+...+.....++... ....|.|..+...|+|.|+|.+.+..|-
T Consensus         7 ~~~~~~~~l~Cp~~~~f~~~~~~~~v~WYKd~~~l~~~~~~~~~~~~~~~L~I~~v~~~D~G~YtC~~~~~~~g   80 (95)
T cd05897           7 LFTSTSGKLVCPDLSDFTINRTDVELQWYKDSVLLDKDNEKFYSLKGSTYLHIIDVSLNDSGYYTCKLQFTHEG   80 (95)
T ss_pred             eccccCcEEECCCHHHcccCCCCCcEEEccCCEECcCCCcceEecCCCCEEEEEEcChhhCEEEEEEEEEeeCC
Confidence            3456677888863 1    45778999999776665333333332 3357999999999999999999987543

Ig2_IL1R2_like: domain similar to the second immunoglobulin (Ig)-like domain of interleukin-1 receptor-2 (IL1R2). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds the type II (IL1R2) represented in this group. Mature IL1R2 consists of three IG-like domains, a transmembrane domain, and a short cytoplasmic domain. It lacks the large cytoplasmic domain of Mature IL1R1, and does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta.

>cd00099 IgV Immunoglobulin variable domain (IgV)

Probab=94.70  E-value=0.036  Score=47.86  Aligned_cols=68  Identities=29%  Similarity=0.446  Sum_probs=47.8

Q ss_pred             cccCCCeeeeeecccCC-CCCeeeccCCc------eeec----------CCCCceEEecC-----CeEEEeeccccCCce
Q psy10163        351 EAEEGNFVTLRCIAIGY-PIPVYTWSKGE------VSID----------GSDGHYKLTLD-----GVLQIVGLVRQDAGI  408 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~-P~P~i~w~k~~------~~l~----------~~~g~~~~~~~-----gsl~I~~~~~~DsG~  408 (615)
                      .+.+|+.++|.|.+... +...+.|.+..      .++.          .-.+++.+..+     -+|+|.++...|+|.
T Consensus         2 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~   81 (105)
T cd00099           2 SVSEGESVTLSCTYSGSFSSYYIFWYRQKPGKGPELLIYISSNGSQYAGGVKGRFSGTRDSSKSSFTLTISSLQPEDSAV   81 (105)
T ss_pred             eecCCCCEEEEEEEeCCcCcceEEEEEECCCCCCEEEEEEeCCCCccCccCCCcEEEEEeccCCEEEEEECCCCHHHCEE
Confidence            46689999999999887 77889996521      1111          11244444322     278999999999999


Q ss_pred             eeecCCCCCC
Q psy10163        409 YVCVAANGIG  418 (615)
Q Consensus       409 Y~C~a~n~~G  418 (615)
                      |.|.+.+..+
T Consensus        82 Y~C~v~~~~~   91 (105)
T cd00099          82 YYCAVSLSGG   91 (105)
T ss_pred             EEEEEecCCC
Confidence            9999876543

IgV: Immunoglobulin variable domain (IgV). Members of the IgV family are components of immunoglobulin (Ig) and T cell receptors. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. Within the variable domain, there are regions of even more variability called the hypervariable or complementarity-determining regions (CDRs) which are responsible for antigen binding. A predominant feature of most Ig domains is the disulfide bridge connecting 2 beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05872 Ig_Sema4B_like Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4B

Probab=94.64  E-value=0.046  Score=46.26  Aligned_cols=62  Identities=21%  Similarity=0.372  Sum_probs=47.2

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      +.+.+|+.++|.|...+. ...+.|.++...+.. +.++.....| |.|..+...|+|.|.|.+.
T Consensus         6 ~tv~~g~~v~L~C~~~s~-~A~v~W~~ng~~l~~-~~r~~~~~~G-LlI~~~~~~dsG~Y~C~s~   67 (85)
T cd05872           6 RTVAPGADVVLPCQLRSN-LASPVWLFNGTPLNA-QFSYRVGTDG-LLILVTSPEHSGTYRCYSE   67 (85)
T ss_pred             EEEecCCCEEEECCCCCC-CccEEEEECCcccCC-CcceEEeCCC-CEEEECCHhhCEEEEEEEe
Confidence            456789999999998887 558999875544432 3555555555 6699999999999999866

Ig_Sema4B_like; Immunoglobulin (Ig)-like domain of Sema4B_like. Sema4B is a Class IV semaphorin. Semaphorins are classified based on structural features additional to the Sema domain. Sema4B has extracellular Sema and Ig domains, a transmembrane domain and a short cytoplasmic domain. Sema4B has been shown to preferentially regulate the development of the postsynaptic specialization at the glutamatergic synapses. This cytoplasmic domain includes a PDZ-binding motif upon which the synaptic localization of Sem4B is dependent. Sema4B is a ligand of CLCP1, CLCP1 was identified in an expression profiling analysis, which compared a highly metastic lung cancer subline with its low metastic parental line. Sema4B was shown to promote CLCP1 endocytosis, and their interaction is a potential target for therapeutic intervention of metastasis.

>cd04983 IgV_TCR_alpha_like Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) alpha chain and similar proteins

Probab=94.45  E-value=0.054  Score=47.29  Aligned_cols=68  Identities=25%  Similarity=0.422  Sum_probs=50.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eeec-------CCCCceEEecC-----CeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSID-------GSDGHYKLTLD-----GVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l~-------~~~g~~~~~~~-----gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.+.+.+.|.+..      .++.       ...+++.+...     -+|.|.++...|+|.|.
T Consensus         7 ~v~~~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~   86 (109)
T cd04983           7 SLSVQEGENVTLNCNYSTSTFYYLFWYRQYPGQGPQFLIYISSNGEEKEKGRFSATLDKSRKSSSLHISAAQLSDSAVYF   86 (109)
T ss_pred             ceEEcCCCCEEEEEEECCCCccEEEEEEECCCCCeEEEEEEecCCCcccCCcEEEEEcccCCEEEEEECCCCHHHCEEEE
Confidence            456789999999999998888899996521      1111       12366655432     27999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+.+.
T Consensus        87 C~~~~~   92 (109)
T cd04983          87 CALSES   92 (109)
T ss_pred             EEEecC
Confidence            997754

IgV_TCR_alpha: immunoglobulin (Ig) variable domain of the alpha chain of alpha/beta T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. This group represents the variable domain of the alpha chain of TCRs and also includes the variable domain of delta chains of TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. The variable domain of TCRs is responsible for antigen recognition, and is located at the N-terminus of the receptor. Gamma/delta TCRs recognize intact protein antigens; they recognize proteins antigens directly and without antigen processing, and MHC independently of the bound peptide.

>cd05881 Ig1_Necl-2 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1))

Probab=94.16  E-value=0.11  Score=44.89  Aligned_cols=67  Identities=18%  Similarity=0.256  Sum_probs=47.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc-eee-c-----CCCCceEEec-CC---eEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE-VSI-D-----GSDGHYKLTL-DG---VLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~-~~l-~-----~~~g~~~~~~-~g---sl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.....+.|-+.. .++ .     ..+.++.... .+   +|+|..+...|+|.|.|.+-.
T Consensus         6 nvtv~~G~ta~L~C~v~~~~~~~v~w~~~~~~~i~~~~~~~~~d~Rf~~~~~~~~~~tL~I~~vq~~D~G~Y~Cqv~t   83 (95)
T cd05881           6 DVTVVEGEVAIISCRVKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSSNELRVSLSNVSLSDEGRYFCQLYT   83 (95)
T ss_pred             ceEEcCCCcEEEEEEEccCCccEEEEEecCCcEEEecCccccCCcCEEEEeCCCCEEEEEECcCCcccCEEEEEEEEc
Confidence            467889999999999998866667775422 111 0     1345665444 23   589999999999999998653

Ig1_Necl-2: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-2, Necl-2 (also known as cell adhesion molecule 1 (CADM1), SynCAM1, IGSF4A, Tslc1, sgIGSF, and RA175). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region, belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-2 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-2 is expressed in a wide variety of tissues, and is a

>cd05860 Ig4_SCFR Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR)

Probab=94.13  E-value=0.11  Score=45.47  Aligned_cols=80  Identities=21%  Similarity=0.322  Sum_probs=57.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEe-c------CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLT-L------DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~-~------~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+++|+.+.|++.+...|.|. +.|.+.+..+.......... .      ...|.+..+...|.|.|++.+.|+...
T Consensus        11 ~~~~v~~gE~~~L~V~ieAYP~p~~~~W~~~~~~l~~~~~~~~~~~~~~~~rY~S~L~L~Rlk~~E~G~YTf~a~N~~~~   90 (101)
T cd05860          11 TTIFVNAGENLDLIVEYEAYPKPEHQQWIYMNRTLTNTSDHYVKSRNESNNRYVSELHLTRLKGTEGGTYTFLVSNSDAS   90 (101)
T ss_pred             ceEEEECCCCEEEEEEEEeCCCCeeeEEEcCCcccCccccceeEEeccCceEEEEEEEEeecChhhCcEEEEEEECCCCe
Confidence            446788999999999999999998 99998665553222222211 1      136889999999999999999998776


Q ss_pred             ccccceeee
Q psy10163        420 PIRKEFNVI  428 (615)
Q Consensus       420 p~~~~~~l~  428 (615)
                       ....+.|.
T Consensus        91 -~s~tF~l~   98 (101)
T cd05860          91 -ASVTFNVY   98 (101)
T ss_pred             -EEEEEEEE
Confidence             33334433

Ig4_SCFR: The fourth Immunoglobulin (Ig)-like domain in stem cell factor receptor (SCFR). SCFR is organized as an extracellular component having five IG-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR. This fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth domain abolishes the ligand-induced dimerization of SCFR and completely inhibits signal transduction.

>KOG4221|consensus

Probab=93.84  E-value=0.1  Score=62.25  Aligned_cols=76  Identities=25%  Similarity=0.446  Sum_probs=60.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ..+..|+.+-+.|.+-+.|.|.|.|.|.+.-+- .+++++...+|.|+|..+.+.|.|.|-|++.++.-.-...+..
T Consensus       150 ~t~~~g~ta~f~c~vn~e~~p~i~w~kn~~pl~-~~~r~i~lpsG~L~I~~~qp~d~g~yrc~vt~g~~~r~S~~a~  225 (1381)
T KOG4221|consen  150 TTLLYGQTALFSCEVNAEPVPTIMWLKNDQPLP-LDSRVIVLPSGALEISGLQPSDTGEYRCVVTGGASQRTSNEAE  225 (1381)
T ss_pred             eeEecCCcEEEEEEEcCccCceeEEeccccccc-CCCcEEEcCCCcEEecccccCCCceEEEEEecCCcCCccceeE
Confidence            456688999999999999999999998665332 2348888899999999999999999999988764443344433

>cd05751 Ig1_LILRB1_like First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins

Probab=93.84  E-value=0.084  Score=44.90  Aligned_cols=67  Identities=24%  Similarity=0.317  Sum_probs=43.7

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      +...+.+|+.++|+|... .+...+.|.|+...+.... .......+.+.|..+...|+|.|.|...+.
T Consensus         9 p~~vV~~G~~VtL~C~~~-~~~~~f~l~k~g~~~~~~~-~~~~~~~~~f~i~~v~~~~~G~Y~C~~~~~   75 (91)
T cd05751           9 PSSVVPLGKPVTLRCQGP-YGAVEYRLYREGSTFAVKK-PPEPQNKAKFFIPSMKREHAGRYRCYYRSG   75 (91)
T ss_pred             CCCccCCCCcEEEEEecC-CCCCEEEEEECCCCccccc-cCCCceeEEEEccCCChhHCEEEEEEEECC
Confidence            344567899999999875 5666666655322211100 001122346888999999999999998765

Ig1_LILRB1_like: domain similar to the first immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1). This group includes, LILRA5 (LIR9), an activating natural cytotoxicity receptor NKp46, and the immune-type receptor glycoprotein VI (GPVI). LILRs are a family of immunoreceptors expressed on expressed on T and B cells, on monocytes, dendritic cells, and subgroups of natural killer (NK) cells. The human LILR family contains nine proteins (LILRA1-3,and 5, and LILRB1-5). From functional assays, and as the cytoplasmic domains of various LILRs, for example LILRB1 (LIR-1), LILRB2 (LIR-2), and LILRB3 (LIR-3) contain immunoreceptor tyrosine-based inhibitory motifs (ITIMs) it is thought that LIR proteins are inhibitory receptors. Of the eight LIR family proteins, only LIR-1(LILRB1), and LIR-2 (LILRB2),

>PF13927 Ig_3: Immunoglobulin domain; PDB: 2D3V_A 1G0X_A 1VDG_A 1P7Q_D 3D2U_H 1UFU_A 1UGN_A 3VH8_H 3OQ3_B 4DKD_C

Probab=93.77  E-value=0.032  Score=44.29  Aligned_cols=57  Identities=33%  Similarity=0.556  Sum_probs=40.7

Q ss_pred             eeeeecccCCC-CCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCC
Q psy10163        358 VTLRCIAIGYP-IPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       358 ~tl~C~~~G~P-~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      ++|.|.+.+.| .+.+.|.. ..................|.|..+...|.|.|.|.|.|
T Consensus        18 ~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~~~g~y~C~a~N   75 (75)
T PF13927_consen   18 VTLTCSAEGGPPPPSISWYD-SNPSFNSNSRGSSSSNSTLTISNVTRSDNGTYTCIASN   75 (75)
T ss_dssp             EEEEEEESSEESSEEEEEET-EEEEEEEEEEEEEEEEEEEEESSCCGGGTEEEEEEEEE
T ss_pred             EEEEEEEccccCCeEEEEEe-cCCceeeeeeeccceeeEEEEccCCHHhCcEEEEEEEC
Confidence            99999999998 88999992 11111111223334456788889999999999999864

...

>cd05899 IgV_TCR_beta Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) bet a chain

Probab=93.56  E-value=0.16  Score=44.63  Aligned_cols=67  Identities=19%  Similarity=0.389  Sum_probs=47.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eee-----------cCCCCceEEecC----CeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSI-----------DGSDGHYKLTLD----GVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l-----------~~~~g~~~~~~~----gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+ +.+.|.|-|..      .++           ....+++.....    -+|.|.++...|+|
T Consensus         7 ~~~v~~G~~v~l~C~~~~-~~~~v~Wykq~~g~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~~~~~Dsg   85 (110)
T cd05899           7 YLIKGRGQSVTLRCSQTS-GHDNMYWYRQDPGKGLQLLFYSNGGSLNEEEGDPKDRFSASRPSLTRSSLTIKSAEPEDSA   85 (110)
T ss_pred             ceEEcCCCcEEEEEEECC-CCCEEEEEEECCCCCcEEEEEEcCCCceEecCccCCceEEECcCCCccEEEECCCChhhCE
Confidence            356789999999999888 78899995421      121           111245544322    36899999999999


Q ss_pred             eeeecCCCC
Q psy10163        408 IYVCVAANG  416 (615)
Q Consensus       408 ~Y~C~a~n~  416 (615)
                      .|.|.+...
T Consensus        86 ~Y~Ca~~~~   94 (110)
T cd05899          86 VYLCASSLG   94 (110)
T ss_pred             EEEEEeeCC
Confidence            999997654

IgV_TCR_beta: immunoglobulin (Ig) variable domain of the beta chain of alpha/beta T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. This group includes the variable domain of the alpha chain of alpha/beta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. The variable domain of TCRs is responsible for antigen recognition, and is located at the N-terminus of the receptor. Gamma/delta TCRs recognize intact protein antigens; they recognize proteins antigens directly and without antigen processing, and MHC independently of the bound peptide.

>cd05878 Ig_Aggrecan_like Immunoglobulin (Ig)-like domain of the aggrecan-like chondroitin sulfate proteoglycan core protein (CSPG)

Probab=93.15  E-value=0.14  Score=45.37  Aligned_cols=76  Identities=29%  Similarity=0.460  Sum_probs=49.0

Q ss_pred             CCeeeeeecccCCC----------CCeeeccCC-----ceee--cCC--------CCceEEe------cCCeEEEeeccc
Q psy10163        355 GNFVTLRCIAIGYP----------IPVYTWSKG-----EVSI--DGS--------DGHYKLT------LDGVLQIVGLVR  403 (615)
Q Consensus       355 g~~~tl~C~~~G~P----------~P~i~w~k~-----~~~l--~~~--------~g~~~~~------~~gsl~I~~~~~  403 (615)
                      |+.++|.|.....+          ...|.|.|.     ..++  ...        .+|+.+.      .+.+|+|.++..
T Consensus         2 G~~V~LpC~~~~~~~~~~~~~~~~~~~i~W~k~~~~~~~~v~~~~~~~~~~~~~f~gR~~~~~~~~~~~~asL~I~~l~~   81 (110)
T cd05878           2 SSSVLLPCYFTLPPALPPPSNAPESPRIKWTKLSGQKEVTVLVAQDGVVKVGQEYQGRVSLPNYPENRGDASLEISRLRS   81 (110)
T ss_pred             CCCEEEeeEeeCCccccccccCCCCCEEEEEEecCCCcEEEEEEECCEEEecccccCeEEeccCCCCCCcEEEEECCCCh
Confidence            67889999876554          256889652     1111  100        1454442      234799999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeecc
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.|.|....+... -+..+.|.|.+
T Consensus        82 sD~G~Y~C~v~~~~~~-~~~~v~l~V~g  108 (110)
T cd05878          82 SDSGVYRCEVMHGIED-EQDTVPLEVTG  108 (110)
T ss_pred             hhCEEEEEEEEeCCCc-ceEEEEEEEEE
Confidence            9999999987665443 45566666654

Ig_Aggrecan_like: immunoglobulin (Ig)-like domain of the aggrecan-like chondroitin sulfate proteoglycan core protein (CSPG)s. Included in this group are the Ig domains of other CSPGs: versican, and neurocan. In CSPGs this Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggrecan and versican have a wide distribution in connective tissue and extracellular matrices. Neurocan is localized almost exclusively in nervous tissue. Aggregates having other CSPGs substi

>cd04980 IgV_L_kappa Immunoglobulin (Ig) light chain, kappa type, variable (V) domain

Probab=92.95  E-value=0.2  Score=43.74  Aligned_cols=67  Identities=21%  Similarity=0.321  Sum_probs=46.2

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+.. ...|.|-+      ...++..       ..+++.....   .+|.|.++...|+|.|.|
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~~~~~Dsg~Y~C   88 (106)
T cd04980           9 TLSVSPGESATISCKASQSVSSNYLAWYQQKPGQAPKLLIYGASTLASGTPSRFSGSGSGTDFTLTISRVEPEDAAVYYC   88 (106)
T ss_pred             cEEECCCCCEEEEEEECCCCCCCcEEEEEECCCCCcEEEEECccccCCCCCCCEEEeccCCEEEEEECCCChHHCEEEEE
Confidence            35678999999999987766 67899943      1222211       1234544322   258999999999999999


Q ss_pred             cCCC
Q psy10163        412 VAAN  415 (615)
Q Consensus       412 ~a~n  415 (615)
                      .+.+
T Consensus        89 a~~~   92 (106)
T cd04980          89 QQYG   92 (106)
T ss_pred             EEeC
Confidence            8754

IgV_L_kappa: Immunoglobulin (Ig) light chain, kappa type, variable (V) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which seem to be functionally identical, and can associate with any of the heavy chains.

>cd05718 Ig1_PVR_like First immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155) and similar proteins

Probab=92.30  E-value=0.25  Score=42.08  Aligned_cols=63  Identities=29%  Similarity=0.354  Sum_probs=40.4

Q ss_pred             eeeeeecccCCC---CCeeeccCCce-------eecCC---------CCceEEe----cCCeEEEeeccccCCceeeecC
Q psy10163        357 FVTLRCIAIGYP---IPVYTWSKGEV-------SIDGS---------DGHYKLT----LDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       357 ~~tl~C~~~G~P---~P~i~w~k~~~-------~l~~~---------~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      .++|.|.....+   ...|.|.|...       ++...         .++..+.    .+.+|+|.++...|+|.|.|..
T Consensus         2 ~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v   81 (98)
T cd05718           2 SVTLECSFPVPGPVQITQVTWMKITGGSKQNIAVFHPQYGISIPPSYEGRVSFLNSSLEDATISISNLRLEDEGNYICEF   81 (98)
T ss_pred             CEEEEeEeeCCCCceEEEEEEeeECCCCCEEEEEEecCCCcccCcCcCceEEEeCCCCCceEEEEccCCcccCEEEEEEE
Confidence            578889877654   44799977331       11111         2333333    3468999999999999999985


Q ss_pred             C-CCCCc
Q psy10163        414 A-NGIGD  419 (615)
Q Consensus       414 ~-n~~G~  419 (615)
                      . ...|.
T Consensus        82 ~~~~~g~   88 (98)
T cd05718          82 ATFPQGN   88 (98)
T ss_pred             EeCCCCc
Confidence            4 34444

Ig1_PVR_like: domain similar to the first immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155). Poliovirus (PV) binds to its cellular receptor (PVR/CD155) to initiate infection. CD155 is a membrane-anchored, single-span glycoprotein; its extracellular region has three Ig-like domains. There are four different isotypes of CD155 (referred to as alpha, beta, gamma, and delta), that result from alternate splicing of the CD155 mRNA, and have identical extracellular domains. CD155-beta and - gamma, are secreted, CD155-alpha and delta are membrane-bound and function as PV receptors. The virus recognition site is contained in the amino-terminal domain, D1. Having the virus attachment site on the receptor distal from the plasma membrane, may be important for successful initiation of infection of cells by the virus. CD155 binds in the poliovirus "c

>cd04982 IgV_TCR_gamma Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) gamma chain

Probab=92.28  E-value=0.28  Score=43.43  Aligned_cols=67  Identities=24%  Similarity=0.508  Sum_probs=47.5

Q ss_pred             cccccCCCeeeeeecccC--CCCCeeeccCC------ceee--c----------CCCCceEEecC-----CeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIG--YPIPVYTWSKG------EVSI--D----------GSDGHYKLTLD-----GVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G--~P~P~i~w~k~------~~~l--~----------~~~g~~~~~~~-----gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+  .+.+.+.|-+.      ..++  .          ...+++.+..+     ..|.|.++..
T Consensus         7 ~~~~~~G~~v~l~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~   86 (116)
T cd04982           7 SITREESKSVTISCKVSGIDFSTTYIHWYRQKPGQALERLLYVSSTSTQRKLSGGTKNKFEARKDVGKSTSTLTIQNLEK   86 (116)
T ss_pred             eEEeCCCCCEEEEEEEeCCCccccEEEEEEECCCCCCEEEEEEecCCCcEEeCcccCCCEEEEEECCCCEEEEEEEECCH
Confidence            456788999999999877  68889999551      1111  1          01355554432     2689999999


Q ss_pred             cCCceeeecCCC
Q psy10163        404 QDAGIYVCVAAN  415 (615)
Q Consensus       404 ~DsG~Y~C~a~n  415 (615)
                      .|+|.|.|.+..
T Consensus        87 ~Dsg~Y~C~~~~   98 (116)
T cd04982          87 EDSATYYCAYWE   98 (116)
T ss_pred             HHCEEEEEEEec
Confidence            999999998653

IgV_TCR_gamma: immunoglobulin (Ig) variable (V) domain of the gamma chain of gamma/delta T-cell receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are heterodimers consisting of alpha and beta chains or gamma and delta chains. Each chain contains a variable (V) and a constant (C) region. The majority of T cells contain alpha/beta TCRs but a small subset contain gamma/delta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma/delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma/delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds. The variable domain of gamma/delta TCRs is responsible for antigen recognition and is

>cd05902 Ig_Neurocan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), neurocan

Probab=91.70  E-value=0.2  Score=44.54  Aligned_cols=76  Identities=26%  Similarity=0.375  Sum_probs=48.2

Q ss_pred             CCeeeeeecccCCC-------CCeeeccCCc--------eeec----------CCCCceEEec------CCeEEEeeccc
Q psy10163        355 GNFVTLRCIAIGYP-------IPVYTWSKGE--------VSID----------GSDGHYKLTL------DGVLQIVGLVR  403 (615)
Q Consensus       355 g~~~tl~C~~~G~P-------~P~i~w~k~~--------~~l~----------~~~g~~~~~~------~gsl~I~~~~~  403 (615)
                      |+.++|.|...-.|       .+.|.|.+..        .++.          .=.||..+..      +.+|.|.++..
T Consensus         2 ~~~v~LpC~~~~~p~~~~~~~~~~I~W~k~~~~~~~~~~~v~v~~~~~~~~~~~y~gRvsl~~~~~~~~~asL~i~nv~~   81 (110)
T cd05902           2 SSSVLLPCVFTLPPSASSPPEGPRIKWTKLRPASGQKQRPVLVARDNVVRVAKAFQGRVSLPGYPKNRYNASLVLSRLRY   81 (110)
T ss_pred             CCcEEEeeEEEcCccccCCCCCCEEEEEEeCCCCCceEEEEEECCCCcEEEchhcccEEEeecCCCCCceEEEEECCCCH
Confidence            56788889754333       3688896531        1111          1125555543      34899999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeecc
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.|.|....+... -+..+.|.|.+
T Consensus        82 ~D~G~Y~C~v~~g~~~-~~~~v~L~V~g  108 (110)
T cd05902          82 SDSGTYRCEVVLGIND-EQDTVPLEVTG  108 (110)
T ss_pred             HHCEEEEEEEEECCcc-cEEEEEEEEEE
Confidence            9999999986665433 44556666654

Ig_Neurocan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), neurocan. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, the CSPG aggrecan (not included in this group) forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Unlike aggrecan which is widely distributed in connective tissue and extracellular matrices, neurocan is localized almost exclusively in nervous tissue. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many differen

>cd05713 Ig_MOG_like Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)

Probab=91.31  E-value=0.41  Score=41.05  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=26.1

Q ss_pred             CeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       394 gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .+|.|.++...|+|.|.|...+..+. ....+.|.|
T Consensus        65 ~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~~~i~l~v   99 (100)
T cd05713          65 VALRIHNVRASDEGLYTCFFQSDGFY-EEATVELKV   99 (100)
T ss_pred             EEEEEEcCChhhCEEEEEEEecCCcE-EEEEEEEEE
Confidence            47999999999999999998876554 344444443

Ig_MOG_like: immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG). MOG, a minor component of the myelin sheath, is an important CNS-specific autoantigen, linked to the pathogenesis of multiple sclerosis (MS) and experimental autoimmune encephalomyelitis (EAE). It is a transmembrane protein having an extracellular Ig domain. MOG is expressed in the CNS on the outermost lamellae of the myelin sheath, and on the surface of oligodendrocytes, and may participate in the completion, compaction, and/or maintenance of myelin. This group also includes butyrophilin (BTN). BTN is the most abundant protein in bovine milk-fat globule membrane (MFGM).

>cd05716 Ig_pIgR Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)

Probab=91.08  E-value=0.38  Score=41.15  Aligned_cols=67  Identities=27%  Similarity=0.338  Sum_probs=45.7

Q ss_pred             ccccCCCeeeeeecccC-CCCCeeeccCCc------eee------cCCCCceEEecC-----CeEEEeeccccCCceeee
Q psy10163        350 VEAEEGNFVTLRCIAIG-YPIPVYTWSKGE------VSI------DGSDGHYKLTLD-----GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~------~~l------~~~~g~~~~~~~-----gsl~I~~~~~~DsG~Y~C  411 (615)
                      +.+.+|+.++|.|.... .....+.|.+..      .++      ..-.+++.+..+     -+|+|.++...|+|.|.|
T Consensus         2 v~~~~G~~vtl~C~~~~~~~~~~~~W~r~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   81 (98)
T cd05716           2 VTGELGGSVTIPCPYPPKNRSYEKYWCKWGSAGCCLIIVSEGSVQSQYEGRVSLTDDPDNGVFTVTLNQLRKEDAGWYWC   81 (98)
T ss_pred             EEEEeCCeEEEEeeCCCCCCCcEeEeECCCCCCCCeEEECCCccccccCCCEEEEecCCCCEEEEEEcCCCHHHCEEEEE
Confidence            35678999999998765 456778996532      111      011255655422     268999999999999999


Q ss_pred             cCCCC
Q psy10163        412 VAANG  416 (615)
Q Consensus       412 ~a~n~  416 (615)
                      .....
T Consensus        82 ~~~~~   86 (98)
T cd05716          82 GVGDD   86 (98)
T ss_pred             EcccC
Confidence            86654

Ig_pIgR: Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR). pIgR delivers dimeric IgA and pentameric IgM to mucosal secretions. Polymeric immunoglobulin (pIgs) are the first defense against pathogens and toxins. IgA and IgM can form polymers via an 18-residue extension at their c-termini referred to as the tailpiece. pIgR transports pIgs across mucosal epithelia into mucosal secretions. Human pIgR is a glycosylated type I transmembrane protein, comprised of a 620 residue extracellular region, a 23 residue transmembrane region, and a 103 residue cytoplasmic tail. The extracellular region contains five domains that share sequence similarity with Ig variable (v) regions.

>KOG4194|consensus

Probab=91.00  E-value=0.21  Score=55.84  Aligned_cols=69  Identities=29%  Similarity=0.491  Sum_probs=50.9

Q ss_pred             ccccCCCeeeeeecccCCCC-CeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~-P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+..|+++.+.|.+.|.|. |.+.|.|++..+-..+ +..+.. +..|++......|+|.|+|...+..|.
T Consensus       716 ~~V~~get~vlqC~a~~~~a~pr~~W~k~d~pil~t~-rh~f~d~dQllvv~~~~~~daG~yTcem~~~~~~  786 (873)
T KOG4194|consen  716 QLVVVGETLVLQCLAEGAPADPRLEWFKEDKPILITE-RHTFPDGDQLLVVKENLVEDAGIYTCEMSNTLGT  786 (873)
T ss_pred             eEEEecceEEEEEecCCCCCCccccccCCCCceEEee-cccCCCCCeEEEEEehhhhhcceEEEEEEeeccc
Confidence            34567899999999999998 9999998544432222 222222 334667777889999999999999887

>cd04984 IgV_L_lambda Immunoglobulin (Ig) lambda light chain variable (V) domain

Probab=90.84  E-value=0.93  Score=38.79  Aligned_cols=65  Identities=20%  Similarity=0.292  Sum_probs=44.0

Q ss_pred             cccCCCeeeeeecccCC--CCCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        351 EAEEGNFVTLRCIAIGY--PIPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~--P~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+|+.++|.|...+.  ....|.|-+      ...++-.       ..+++....++   +|+|.++...|+|.|.|.
T Consensus         2 ~v~~G~~v~l~C~~~~~~~~~~~i~Wy~q~~g~~~~~l~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~   81 (98)
T cd04984           2 SVSPGETVTITCTGSSGNISGNYVNWYQQKPGSAPRYLIYEDSDRPSGIPDRFSGSKSGNTASLTISGAQTEDEADYYCQ   81 (98)
T ss_pred             ccCCCCCEEEEEEEcCCCcCCCCEEEEEECCCCCccEEEEeccccCCCCCCCEEEEccCCEEEEEECCCChhhCEEEEEE
Confidence            35689999999988765  566799943      1222210       12355443332   589999999999999998


Q ss_pred             CCC
Q psy10163        413 AAN  415 (615)
Q Consensus       413 a~n  415 (615)
                      ..+
T Consensus        82 ~~~   84 (98)
T cd04984          82 VWD   84 (98)
T ss_pred             Ecc
Confidence            654

IgV_L_lambda: Immunoglobulin (Ig) light chain, lambda type, variable (V) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which seem to be functionally identical, and can associate with any of the heavy chains.

>cd05880 Ig_EVA1 Immunoglobulin (Ig)-like domain of epithelial V-like antigen 1 (EVA)

Probab=90.69  E-value=0.61  Score=41.55  Aligned_cols=71  Identities=30%  Similarity=0.392  Sum_probs=45.9

Q ss_pred             CcccccCCCeeeeeecccCCC----CCeeeccC-----Cc--eee-cC------CC----CceEEe-----cCCeEEEee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYP----IPVYTWSK-----GE--VSI-DG------SD----GHYKLT-----LDGVLQIVG  400 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P----~P~i~w~k-----~~--~~l-~~------~~----g~~~~~-----~~gsl~I~~  400 (615)
                      ..+.+.+|+.++|.|.....+    ...|.|.+     ..  .++ ..      ..    ++..+.     .+.+|.|.+
T Consensus         6 ~~v~~~~G~~v~L~C~~s~~~~~~~~~~i~W~~~~~~~~~~~~v~~~~~~~~~~~~~~f~~R~~~~~~~~~~~~sL~I~~   85 (115)
T cd05880           6 KEVEAVNGTDVRLKCTFSSSAPIGDTLVITWNFRPLDGGREESVFYYHKRPYPPPDGRFKGRVVWDGNIMRRDASILIWQ   85 (115)
T ss_pred             ceEEEEcCCCEEEEEEEEeCCCCCCcEEEEEEEECCCCCceeEEEEECCCccccCcccccCeEEEecCCcCCceEEEEee
Confidence            456788999999999765432    23699942     11  122 11      11    233222     244799999


Q ss_pred             ccccCCceeeecCCCCCC
Q psy10163        401 LVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       401 ~~~~DsG~Y~C~a~n~~G  418 (615)
                      +...|+|.|.|...+...
T Consensus        86 v~~~D~G~Y~C~v~~~~~  103 (115)
T cd05880          86 LQPTDNGTYTCQVKNPPD  103 (115)
T ss_pred             CChhhCEEEEEEEEeCCC
Confidence            999999999998775433

Ig_EVA: immunoglobulin (Ig) domain of epithelial V-like antigen 1 (EVA). EVA is also known as myelin protein zero-like 2. EVA is an adhesion molecule, which may play a role in structural organization of the thymus and early lymphocyte development.

>cd05901 Ig_Versican Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), versican

Probab=89.73  E-value=0.56  Score=42.15  Aligned_cols=38  Identities=39%  Similarity=0.645  Sum_probs=29.5

Q ss_pred             CCeEEEeeccccCCceeeecCCCCCCcccccceeeeecc
Q psy10163        393 DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       393 ~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      +.+|.|.++...|+|.|.|.-..+... .+..+.|.|.+
T Consensus        78 ~asL~i~~v~~sD~G~Y~C~V~~g~~~-~~~~v~L~V~G  115 (117)
T cd05901          78 DASLTIVKLRASDAGVYRCEVMHGIED-TQDTVSLDVSG  115 (117)
T ss_pred             ceEEEEcccccccCEEEEEEEEECCcc-cEEEEEEEEEE
Confidence            458999999999999999987766555 45566666654

Ig_Versican: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), versican. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, the CSPG aggrecan (not included in this group) forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Like aggrecan, versican has a wide distribution in connective tissue and extracellular matrices. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Members of the vertebrate HPLN (hyaluronan/HA

>cd05715 Ig_P0-like Immunoglobulin (Ig)-like domain of Protein zero (P0) and similar proteins

Probab=88.90  E-value=0.91  Score=40.31  Aligned_cols=69  Identities=30%  Similarity=0.371  Sum_probs=44.1

Q ss_pred             CcccccCCCeeeeeecccCCC----CCeeeccCC-------ceee--c-C-----CCCc----eEEec-----CCeEEEe
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYP----IPVYTWSKG-------EVSI--D-G-----SDGH----YKLTL-----DGVLQIV  399 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~-------~~~l--~-~-----~~g~----~~~~~-----~gsl~I~  399 (615)
                      ..+.+.+|+.++|.|......    ...|.|.+.       ..++  . .     ..++    ..+..     +.+|+|.
T Consensus         6 ~~v~v~~G~~vtL~C~~s~~~~~~~~~~v~W~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~   85 (116)
T cd05715           6 REVYAVNGSDVRLKCTFSSSEPISDDISVTWSFQPEGSGDTESIFHYHKGPYYPLKDGRFKDRVEWVGNPSRKDASIVIH   85 (116)
T ss_pred             CeEEEEcCCCeEEEeEEeCCCCcCCceEEEEEEecCCCCCcEEEEEEcCCccccccCccccCcEEEecCCcCCeeEEEEe
Confidence            346677999999999765432    256999431       1111  0 0     1222    22222     2479999


Q ss_pred             eccccCCceeeecCCCC
Q psy10163        400 GLVRQDAGIYVCVAANG  416 (615)
Q Consensus       400 ~~~~~DsG~Y~C~a~n~  416 (615)
                      ++...|+|.|.|...+.
T Consensus        86 ~v~~~D~G~Y~C~v~~~  102 (116)
T cd05715          86 NLQFTDNGTYTCDVKNP  102 (116)
T ss_pred             eCCcccCEEEEEEEEeC
Confidence            99999999999987654

Ig_P0ex-like: domain similar to the immunoglobulin (Ig) domain of Protein zero (P0). P0 accounts for over 50% of the total protein in peripheral nervous system (PNS) myelin. P0 is a single-pass transmembrane glycoprotein with a highly basic intracellular domain and an extracellular Ig domain. The extracellular domain of P0 (P0-ED) is similar to the Ig variable domain, carrying one acceptor sequence for N-linked glycosylation. P0 plays a role in membrane adhesion in the spiral wraps of the myelin sheath. The intracellular domain is thought to mediate membrane apposition of the cytoplasmic faces and may, through electrostatic interactions, interact directly with lipid headgroups. It is thought that homophilic interactions of the P0 extracellular domain mediate membrane juxtaposition in the extracellular space of PNS myelin. This group also contains the Ig domain of Sodium channel subunit beta-2

>cd05879 Ig_P0 Immunoglobulin (Ig)-like domain of Protein zero (P0)

Probab=88.60  E-value=1.2  Score=39.92  Aligned_cols=71  Identities=23%  Similarity=0.259  Sum_probs=46.7

Q ss_pred             CCcccccCCCeeeeeecccCC----CCCeeeccCC----c---eeecC--------CC----CceEEe-----cCCeEEE
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGY----PIPVYTWSKG----E---VSIDG--------SD----GHYKLT-----LDGVLQI  398 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~----P~P~i~w~k~----~---~~l~~--------~~----g~~~~~-----~~gsl~I  398 (615)
                      ...+.+..|+.++|.|.....    +...|+|...    .   .++.-        ..    +|..+.     .+.+|.|
T Consensus         5 ~~ev~a~~G~~v~L~C~f~~~~~~~~~~~v~W~~~~~~~~~~~~v~~y~~g~~~~~~~~~f~~Rv~f~g~~~~~daSI~I   84 (116)
T cd05879           5 DREVYGTVGSDVTLSCSFWSSEWISDDISFTWHYQPDGSRDAISIFHYGKGQPYIDDVGPFKERIEWVGNPSRKDGSIVI   84 (116)
T ss_pred             cceEEEEcCCcEEEEEEEecCCCCCCcEEEEEEEcCCCCCccEEEEEeCCCceecccccCccCceEEeCCCCcCeeEEEE
Confidence            345677789999999987653    3458999320    0   11110        11    244332     3458999


Q ss_pred             eeccccCCceeeecCCCCC
Q psy10163        399 VGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       399 ~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .++...|.|.|+|...|..
T Consensus        85 ~nv~~sD~G~Y~C~v~n~p  103 (116)
T cd05879          85 HNLDYTDNGTFTCDVKNPP  103 (116)
T ss_pred             ccCCcccCEEEEEEEEcCC
Confidence            9999999999999877653

Ig_P0ex: immunoglobulin (Ig) domain of Protein zero (P0). P0 accounts for over 50% of the total protein in peripheral nervous system (PNS) myelin. P0 is a single-pass transmembrane glycoprotein with a highly basic intracellular domain and an Ig domain. The extracellular domain of P0 (P0-ED) is similar to the Ig variable domain, carrying one acceptor sequence for N-linked glycosylation. P0 plays a role in membrane adhesion in the spiral wraps of the myelin sheath. The intracellular domain is thought to mediate membrane apposition of the cytoplasmic faces and may, through electrostatic interactions, interact directly with lipid headgroups. It is thought that homophilic interactions of the P0 extracellular domain mediate membrane juxtaposition in the extracellular space of PNS myelin.

>PF07686 V-set: Immunoglobulin V-set domain; InterPro: IPR013106 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=88.06  E-value=0.52  Score=40.60  Aligned_cols=68  Identities=26%  Similarity=0.456  Sum_probs=47.3

Q ss_pred             cccccCCCeeeeeeccc-CCCCCeeeccCCc------eee--cC----------CCCceEEecCC-----eEEEeecccc
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYPIPVYTWSKGE------VSI--DG----------SDGHYKLTLDG-----VLQIVGLVRQ  404 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~------~~l--~~----------~~g~~~~~~~g-----sl~I~~~~~~  404 (615)
                      .+.+.+|+.++|.|... ......|.|.+..      .++  ..          -.++..+....     +|.|.++...
T Consensus        10 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~i~~l~~~   89 (114)
T PF07686_consen   10 PVTVQEGESVTLPCSYSSSSNQSSVYWYRQSPGQGPQLIIRYSLSSTNETPTPSYSGRFTFSGNGSQNNFSLTIKNLQPS   89 (114)
T ss_dssp             EEEEETTSEEEEEEEEESSSSGSEEEEEEEETTSEEEEEEEEETTEEEEEEETTETTTEEEEEETTTTEEEEEESSESGG
T ss_pred             eEEEecCCCEEEEEEEeCCCCcceEEEEEECccccceeeeeeccceeeeccccceeeeeeeeecccCCeEEEEECCCCcC
Confidence            46778999999999988 5667789996521      122  00          11344444433     5999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.....
T Consensus        90 DsG~Y~C~v~~~  101 (114)
T PF07686_consen   90 DSGTYFCQVSTS  101 (114)
T ss_dssp             GEEEEEEEEEES
T ss_pred             cCEEEEEEEEEC
Confidence            999999986543

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents the V-set domains, which are Ig-like domains resembling the antibody variable domain. V-set domains are found in diverse protein families, including immunoglobulin light and heavy chains; in several T-cell receptors such as CD2 (Cluster of Differentiation 2), CD4, CD80, and CD86; in myelin membrane adhesion molecules; in junction adhesion molecules (JAM); in tyrosine-protein kinase receptors; and in the programmed cell death protein 1 (PD1).; PDB: 1PY9_A 2NXY_D 1U9K_B 3RNK_A 3BP6_A 3BIK_B 3SBW_A 1NPU_A 3BP5_A 3RNQ_A ....

>PHA02987 Ig domain OX-2-like protein; Provisional

Probab=87.18  E-value=1.6  Score=42.31  Aligned_cols=84  Identities=14%  Similarity=0.243  Sum_probs=55.6

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccCC--cee-ecCC--------CCceEEe----cCCeEEEeeccccCCceeee
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKG--EVS-IDGS--------DGHYKLT----LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~--~~~-l~~~--------~g~~~~~----~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      ..+.+.+|+.++|.|... +...+.|+|.|.  ... +...        .+|..+.    .+..|.|.++...|+|.|.|
T Consensus        23 ~~v~V~ege~VtLsCs~t~s~~~~qVtWkK~~~~IatY~~~g~~i~~~Fk~Rve~mS~s~~~StItIknVt~sDeGcY~C  102 (189)
T PHA02987         23 VKITVSEHVNVKISCNKTSSFNSILITWKKNNKTIAGYGPCGPVIVDKFKNKIEYLSKSFNESTILIKNVSLKDNGCYTC  102 (189)
T ss_pred             EEEEEcCCCCEEEEEecCCCCccceEEEEEcCCCEEEEecCCcEEChhhcCeEEEeccCCCcceEEEEeCChhhCeEEEE
Confidence            346788999999999974 777889999773  111 1110        1233321    33478999999999999999


Q ss_pred             c-CCCCCCcccccceeeeecc
Q psy10163        412 V-AANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       412 ~-a~n~~G~p~~~~~~l~V~~  431 (615)
                      - ..-+.|...+....|.|.+
T Consensus       103 ~F~tfp~G~~~~gt~CLtVt~  123 (189)
T PHA02987        103 IFNTLLSKNNEKGVVCLNVTT  123 (189)
T ss_pred             EEEecCCCCCceeEEEEEEEc
Confidence            6 4455553345556666655

>cd05888 Ig1_Nectin-4_like Frst immunoglobulin (Ig) domain of nectin-4 (also known as poliovirus receptor related protein 4, or as LNIR receptor) and similar proteins

Probab=87.12  E-value=1.2  Score=38.49  Aligned_cols=36  Identities=31%  Similarity=0.540  Sum_probs=26.1

Q ss_pred             CCeEEEeeccccCCceeeecCCC-CCCcccccceeeee
Q psy10163        393 DGVLQIVGLVRQDAGIYVCVAAN-GIGDPIRKEFNVIV  429 (615)
Q Consensus       393 ~gsl~I~~~~~~DsG~Y~C~a~n-~~G~p~~~~~~l~V  429 (615)
                      +.+|.|.++...|+|.|.|...+ +.|. .+..+.|.|
T Consensus        63 ~~sL~I~nv~~sD~GtY~C~v~~~p~g~-~~~~~~L~V   99 (100)
T cd05888          63 DGALILRNAVQADEGKYKCRVITFPAGN-FEAELVLTV   99 (100)
T ss_pred             ceEEEEecCccccceEEEEEEEeCCCCC-eeeEEEEEe
Confidence            55899999999999999998554 4454 344444444

Ig1_Nectin-4_like: domain similar to the first immunoglobulin (Ig) domain of nectin-4 (also known as poliovirus receptor related protein 4, or as LNIR receptor). Nectin-4 belongs to the nectin family, which is comprised of four transmembrane glycoproteins (nectins-1 through -4). Nectins are synaptic cell adhesion molecules (CAMs) which participate in adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. For example nectin-4 trans-interacts with nectin-1. Nectin-4 has also been shown to interact with the actin filament-binding protein, afadin. Unlike the other nectins, which are widely expressed in adult tissues, nectin-4 is mainly expressed during embryogenesis, and is not detected in normal adult

>KOG3540|consensus

Probab=86.28  E-value=0.31  Score=52.75  Aligned_cols=57  Identities=16%  Similarity=0.185  Sum_probs=52.0

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      -..|..+..++.|.....+|-|+..-.+|+-|-.+||.++.|+|...++|+.+|...
T Consensus       107 ck~~~h~Vrp~~Cl~gefvseallvp~kC~ffh~ermD~cEn~~hwh~ea~etC~tk  163 (615)
T KOG3540|consen  107 CKFCLHPVRPYRCLAGEFVSEALLVPEKCQFFHQERMDQCENNQHWHKEAMETCSTK  163 (615)
T ss_pred             ccccCcccccceeecCcchhhhccCcccchhhhccccccccchHHHHHHHHHHhccC
Confidence            445566788899999999999999999999999999999999999999999999865

>cd00096 Ig Immunoglobulin domain

Probab=86.18  E-value=0.94  Score=33.88  Aligned_cols=60  Identities=35%  Similarity=0.562  Sum_probs=40.1

Q ss_pred             eeeeecccCCCCCeeeccCCceeecCCC------CceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        358 VTLRCIAIGYPIPVYTWSKGEVSIDGSD------GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       358 ~tl~C~~~G~P~P~i~w~k~~~~l~~~~------g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      ++|.|.+.+.+.+.+.|.+.........      ..........|.|..+...|.|.|.|.+.+..
T Consensus         1 ~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~   66 (74)
T cd00096           1 VTLTCLASGPPPPTITWLKNGKPLPSSVLTRVRSSRGTSSGSSTLTISNVTLEDSGTYTCVASNSA   66 (74)
T ss_pred             CEEEEEecCCCCCcEEEEECCEECCCcccEEeccccCcceeEEEEEECccCcccCcEEEEEEecCc
Confidence            3578988888888999976443332111      11122334468888888899999999877654

Ig: immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of this group are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as, T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as, butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05711 Ig_FcalphaRI Immunoglobulin (IG)-like domain of of FcalphaRI

Probab=86.17  E-value=0.83  Score=39.13  Aligned_cols=65  Identities=18%  Similarity=0.177  Sum_probs=39.4

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecC--CCCceEEecCCeEEEeeccccCCceeeecC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG--SDGHYKLTLDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~--~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      +...+.+|+++||+|.... +.-.+.|.|+......  ..+.........+.|..+...|+|.|.|..
T Consensus         8 p~~vV~~G~~VTL~C~~~~-~~~~f~l~k~g~~~~~~~~~~~~~~~~~a~f~I~~~~~~~~G~Y~C~~   74 (94)
T cd05711           8 PSPVVPSGENVTLQCHSDI-RFDRFILYKEGRSKPVLHLYEKHHGGFQASFPLGPVTPAHAGTYRCYG   74 (94)
T ss_pred             CCCccCCCCeEEEEEecCC-CCCEEEEEECCCCCCceecccccCCeEEEEEEecCCCcccCEEEEEEE
Confidence            3445678999999997665 4456677553211000  000000001226789999999999999984

IG_FcalphaRI : immunoglobulin (IG)-like domain of of FcalphaRI. FcalphaRI (CD89) is an IgA-specific receptor that is expressed on monocytes, eosinophils, neutrophils and macrophages. FcalphaRI mediates IgA-induced immune effector responses such as phagocytosis, antibody-dependent cell-mediated cytotoxicity and respiratory burst. Both monomeric and dimeric IgA can bind to FcalphaRI, and monomeric or dimeric IgA immune complexes can activate phagocytosis and other immune responses through the clustering of FcalphaRI. The Fc RI ectodomain is comprised of two Ig-like domains oriented at about 90 degree to each another.

>cd00098 IgC Immunoglobulin Constant domain

Probab=86.11  E-value=0.79  Score=38.66  Aligned_cols=65  Identities=26%  Similarity=0.382  Sum_probs=40.2

Q ss_pred             cCCCeeeeeecccCC-C-CCeeeccCCceeecCCC--CceEEecCCe------EEEeeccccCCceeeecCCCCC
Q psy10163        353 EEGNFVTLRCIAIGY-P-IPVYTWSKGEVSIDGSD--GHYKLTLDGV------LQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       353 ~eg~~~tl~C~~~G~-P-~P~i~w~k~~~~l~~~~--g~~~~~~~gs------l~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      ..|+.++|.|.+.|. | ...|+|.++...+....  .......++.      |.+......+.+.|.|.+.+..
T Consensus        11 ~~~~~~~L~C~a~g~~P~~~~i~W~~~g~~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~~~~~y~C~v~h~~   85 (95)
T cd00098          11 LLGGSVTLTCLATGFYPPDITVTWLKNGKELTSGVTTTPPVPNSDGTYSVSSQLTVSPSDWNSGDTYTCVVTHES   85 (95)
T ss_pred             HcCCCeEEEEEEeeEECCCcEEEEEECCEECCCceeccccccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCC
Confidence            357789999999998 6 46899987554443221  1222333343      2233333348899999987653

IgC: Immunoglobulin constant domain (IgC). Members of the IgC family are components of immunoglobulin, T-cell receptors, CD1 cell surface glycoproteins, secretory glycoproteins A/C, and Major Histocompatibility Complex (MHC) class I/II molecules. In immunoglobulins, each chain is composed of one variable domain (IgV) and one or more IgC domains. These names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. The IgV domain is responsible for antigen binding, and the IgC domain is involved in oligomerization and molecular interactions.

>cd07700 IgV_CD8_beta Immunoglobulin (Ig) like domain of CD8 beta chain

Probab=84.46  E-value=1.8  Score=37.88  Aligned_cols=64  Identities=23%  Similarity=0.387  Sum_probs=41.5

Q ss_pred             cccCCCeeeeeecccCCC-CCeeeccCCce---------e-ecC-----------CCCceEEe--cCC---eEEEeeccc
Q psy10163        351 EAEEGNFVTLRCIAIGYP-IPVYTWSKGEV---------S-IDG-----------SDGHYKLT--LDG---VLQIVGLVR  403 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~---------~-l~~-----------~~g~~~~~--~~g---sl~I~~~~~  403 (615)
                      .+.+|+.++|.|.+.+.. ...+.|-+...         + +..           ..+++...  ...   .|+|.++..
T Consensus         2 ~v~~G~~vtL~C~~~~~~~~~~~~Wyrq~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~~   81 (107)
T cd07700           2 LVQTNNTVKLSCEAKGISENTRIYWLRWRQAPKDSHFEFLALWSPLGGATYGEEVSQEKFSIRVTSDSSRYRLHINRVKP   81 (107)
T ss_pred             EEcCCCCEEEEEEEecCCCCCeEEEEEECCCCCCCccEEEEEEcCCCCeEEccccccCcEEEEEECCCCEEEEEECCCCH
Confidence            356899999999886643 45789954111         1 110           02345332  122   589999999


Q ss_pred             cCCceeeecCC
Q psy10163        404 QDAGIYVCVAA  414 (615)
Q Consensus       404 ~DsG~Y~C~a~  414 (615)
                      .|+|.|.|...
T Consensus        82 ~Dsg~YyCa~~   92 (107)
T cd07700          82 EDSGTYFCMTV   92 (107)
T ss_pred             HHCEEEEEeEc
Confidence            99999999864

IgV_CD8_beta: immunoglobulin (Ig)-like domain in CD8 beta. The CD8 glycoprotein plays an essential role in the control of T-cell selection, maturation and the T-cell receptor (TCR)-mediated response to peptide antigen. CD8 is comprised of alpha and beta subunits and is expressed as either an alpha/alpha or alpha/beta dimer. Both dimeric isoforms can serve as a coreceptor for T cell activation and differentiation, however they have distinct physiological roles, different cellular distributions, unique binding partners etc. Each CD8 subunit is comprised of an extracellular domain containing a V-type Ig-like domain, a single pass transmembrane portion and a short intracellular domain.

>cd05846 Ig1_MRC-OX-2_like First immunoglobulin (Ig) domain of rat MRC OX-2 antigen (also known as CD200) and similar proteins

Probab=83.79  E-value=2.3  Score=36.42  Aligned_cols=65  Identities=23%  Similarity=0.235  Sum_probs=38.7

Q ss_pred             CCeeeeeecccCCCCC-eeeccCCc-----eee--cCC---------CCceEEe----cCCeEEEeeccccCCceeeecC
Q psy10163        355 GNFVTLRCIAIGYPIP-VYTWSKGE-----VSI--DGS---------DGHYKLT----LDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P-~i~w~k~~-----~~l--~~~---------~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      |+.++|.|........ .|.|.|..     .++  ...         .++..+.    .+.+|.|.++...|+|.|.|.-
T Consensus         1 G~~vtL~C~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~nv~~~D~G~Y~C~~   80 (97)
T cd05846           1 GGNVTLSCNLTLPEEVLQVTWQKIQGSSPENIATYSEKYGVKIQPSYFRRRSITSLGLNSTSITIWNVTLEDEGCYKCIF   80 (97)
T ss_pred             CCcEEEEEEeCCCCeeEEEEEEEcCCCCceEEEEEcccCCcccCCCccCeEEEcCCCCCccEEEEeCCceeeeEEEEEEE
Confidence            5678999975544322 58997621     111  110         1222221    2447999999999999999973


Q ss_pred             -CCCCCc
Q psy10163        414 -ANGIGD  419 (615)
Q Consensus       414 -~n~~G~  419 (615)
                       ..+.|.
T Consensus        81 ~~~p~g~   87 (97)
T cd05846          81 NTFPDGS   87 (97)
T ss_pred             EeCCCCC
Confidence             344443

Ig1_ MRC-OX-2_like: domain similar to the first immunoglobulin (Ig) domain of rat MRC OX-2 antigen (also known as CD200). MRC OX-2 is a membrane glycoprotein expressed in a variety of lymphoid and non-lymphoid cells in rats. It has a similar broad distribution pattern in humans. MRC OX-2 may regulate myeloid cell activity. The protein has an extracellular portion containing two Ig-like domains, a transmembrane portion, and a cytoplasmic portion.

>cd07706 IgV_TCR_delta Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) delta chain

Probab=82.36  E-value=2  Score=37.97  Aligned_cols=66  Identities=26%  Similarity=0.379  Sum_probs=45.2

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCC------ceeec-------CCCCceEEec-----CCeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKG------EVSID-------GSDGHYKLTL-----DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~------~~~l~-------~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|..... ....|.|.+.      ..++.       ...+++.+..     .-+|.|..+...|+|.|
T Consensus         8 ~v~~~~G~~v~L~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Dsg~Y   87 (116)
T cd07706           8 DVSVQVGEEVTLNCRYETSWTNYYIFWYKQLPSGEMTFLIRQKSIYGNATKGRYSVNFQKAQKSISLTISALQLEDSAKY   87 (116)
T ss_pred             ceEEcCCCCEEEEEEEeCCCCceEEEEEEECCCCceEEEEEecCccCCccCCeEEEEEeccCCEEEEEECCCCHHHCEEE
Confidence            4567899999999987653 4567889541      11111       1125665542     22689999999999999


Q ss_pred             eecCC
Q psy10163        410 VCVAA  414 (615)
Q Consensus       410 ~C~a~  414 (615)
                      .|...
T Consensus        88 ~C~~~   92 (116)
T cd07706          88 FCALS   92 (116)
T ss_pred             EEEEE
Confidence            99865

IgV_TCR_delta: immunoglobulin (Ig) variable (V) domain of the delta chain of gamma/delta T-cell receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are heterodimers consisting of alpha and beta chains or gamma and delta chains. Each chain contains a variable (V) and a constant (C) region. The majority of T cells contain alpha/beta TCRs but a small subset contain gamma/delta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma/delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma/delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds. The variable domain of gamma/delta TCRs is responsible for antigen recognition and is

>cd07705 Ig2_Necl-1 Second immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3))

Probab=81.80  E-value=4.2  Score=33.88  Aligned_cols=60  Identities=18%  Similarity=0.362  Sum_probs=34.7

Q ss_pred             eeeeecccCC-CCCeeeccCCceeecCCCCceEEecC-Ce------EEEeeccccCCceeeecCCCCC
Q psy10163        358 VTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLD-GV------LQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       358 ~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~~-gs------l~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      ++|.|.+.|. |.+.|+|.++...+....-......+ +.      |.+......+...|.|.+....
T Consensus         2 ~~LtC~a~g~~P~~~ItW~k~g~~l~~~~~~~~~~~~~~t~~~~s~l~~~~~~~d~g~~~tC~v~h~~   69 (83)
T cd07705           2 AKLRCTSSGSKPAANIKWRKGDQELEGAPTSVLEDGNGKTFTVSSSVEFQVTREDDGAEITCSVGHES   69 (83)
T ss_pred             EEEEEEecCccCCCEeEEEECCEECCCcceeEEECCCCCEEEEEEEEEEEecchhCCCEEEEEEECcc
Confidence            5789999975 99999998865544321111111111 22      3333333445577999988764

Ig2_Necl-1: second immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3)). These nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 and Necl-2 have Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue and is important to the formation of synapses, axon bundles, and myel

>cd07692 Ig_CD3_epsilon Immunoglobulin (Ig)-like domain of CD3 epsilon chain

Probab=81.51  E-value=2.6  Score=33.71  Aligned_cols=51  Identities=31%  Similarity=0.574  Sum_probs=33.0

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .|.+++|.|+.....   |.|.++...+...+...        ...+.. .++|-|.|.+.+.
T Consensus         6 sGTtVtlTCP~~~~~---i~W~~n~~~~~g~~~~~--------~~~~~~-e~~G~Y~C~~~~~   56 (65)
T cd07692           6 SGTTVTVTCPLSGDD---IKWKKNDQVSQGSDEKY--------LSLNHF-SSSGYYHCTADNA   56 (65)
T ss_pred             eccEEEEECCCCCCC---ceEEeCCccCCCCCceE--------EeeccC-CCCceEEEEeCCC
Confidence            477899999876443   89998765444322222        122233 7899999998754

Ig_CD3_epsilon; immunoglobulin (Ig)-like domain of CD3 epsilon chain. CD3 is a T cell surface receptor that is associated with alpha/beta T cell receptors (TCRs). The CD3 complex consists of one gamma, one delta, two epsilon, and two zeta chains. The CD3 subunits form heterodimers as gamma/epsilon, delta/epsilon, and zeta/zeta. The gamma, delta, and epsilon chains each contain an extracellular Ig domain, whereas the extracellular domains of the zeta chains are very small and have unknown structure. The CD3 domain participates in intracellular signalling once the TCR has bound an MHC/antigen complex.

>cd05761 Ig2_Necl-1-4_like Second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 - Necl-4 (also known as cell adhesion molecules CADM3, CADM1, CADM2, and CADM4, respectively)

Probab=81.16  E-value=3.9  Score=33.85  Aligned_cols=60  Identities=20%  Similarity=0.380  Sum_probs=33.3

Q ss_pred             eeeeecccCC-CCCeeeccCCceeecCCCCceEEe-cCCeEEEe-----eccc-cCCceeeecCCCCCC
Q psy10163        358 VTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLT-LDGVLQIV-----GLVR-QDAGIYVCVAANGIG  418 (615)
Q Consensus       358 ~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~-~~gsl~I~-----~~~~-~DsG~Y~C~a~n~~G  418 (615)
                      ++|.|.+.+. |.+.|+|.++...+.... ..... .++.+.+.     .... .+...|.|.+.+..-
T Consensus         2 ~~L~C~~~~~~P~~~v~W~~~~~~l~~~~-~~~~~~~~~~~~~~s~l~~~~~~~d~g~~~~C~v~h~~l   69 (82)
T cd05761           2 VELTCTSSGSKPAATIRWFKGDKELKGVK-LKEEDENGKTFTVTSSLRFQVDREDDGAPIICRVDHPAL   69 (82)
T ss_pred             EEEEEEecCcCcCCeEEEEECCEEccCce-eeEecCCCCEEEEEEEEEEEcchhhCCCEEEEEEeChhc
Confidence            5788998765 999999987554443221 11111 22222222     2223 334579999887644

Ig2_Necl-1-4_like: domain similar to the second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 (also known as cell adhesion molecule 3 (CADM3)), Necl-2 (CADM1), Necl-3 (CADM2) and Necl-4 (CADM4). These nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 and Necl-2 have Ca(2+)-independent homophilic and heterophilic cell-cel

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	615
2ody_E	127	Thrombin-bound Boophilin Displays A Functional And		1e-12
2ody_E	127	Thrombin-bound Boophilin Displays A Functional And		2e-06
1bik_A	147	X-Ray Structure Of Bikunin From The Human Inter-Alp		6e-11
1bik_A	147	X-Ray Structure Of Bikunin From The Human Inter-Alp		1e-05
1aap_A	58	X-Ray Crystal Structure Of The Protease Inhibitor D		1e-09
1aap_A	58	X-Ray Crystal Structure Of The Protease Inhibitor D		2e-08
1brc_I	56	Relocating A Negative Charge In The Binding Pocket		1e-09
1brc_I	56	Relocating A Negative Charge In The Binding Pocket		2e-08
1kth_A	58	The Anisotropic Refinement Of Kunitz Type Domain C5		2e-09
1kth_A	58	The Anisotropic Refinement Of Kunitz Type Domain C5		6e-08
3l3t_E	57	Human Mesotrypsin Complexed With Amyloid Precursor		2e-09
3l3t_E	57	Human Mesotrypsin Complexed With Amyloid Precursor		1e-08
1zjd_B	57	Crystal Structure Of The Catalytic Domain Of Coagul		3e-09
1zjd_B	57	Crystal Structure Of The Catalytic Domain Of Coagul		2e-08
1ca0_D	54	Bovine Chymotrypsin Complexed To Appi Length = 54		3e-09
1ca0_D	54	Bovine Chymotrypsin Complexed To Appi Length = 54		3e-08
3l33_E	52	Human Mesotrypsin Complexed With Amyloid Precursor		6e-09
3l33_E	52	Human Mesotrypsin Complexed With Amyloid Precursor		2e-07
3byb_A	59	Crystal Structure Of Textilinin-1, A Kunitz-Type Se		7e-09
3d65_I	57	Crystal Structure Of Textilinin-1, A Kunitz-Type Se		7e-09
1zr0_B	63	Crystal Structure Of Kunitz Domain 1 Of Tissue Fact		3e-08
1zr0_B	63	Crystal Structure Of Kunitz Domain 1 Of Tissue Fact		8e-08
2ddi_A	70	Nmr Structure Of The Second Kunitz Domain Of Human		1e-07
1yc0_I	75	Short Form Hgfa With First Kunitz Domain From Hai-1		1e-07
1yc0_I	75	Short Form Hgfa With First Kunitz Domain From Hai-1		6e-05
1co7_I	99	R117h Mutant Rat Anionic Trypsin Complexed With Bov		2e-07
1jc6_A	65	Solution Structure Of Bungarus Faciatus Ix, A Kunit		5e-07
3pxj_A	210	Tandem Ig Repeats Of Dlar Length = 210		1e-06
1dem_A	60	Proteinase Inhibitor Homologues As Potassium Channe		1e-06
2yd1_A	212	Crystal Structure Of The N-Terminal Ig1-2 Module Of		1e-06
1irh_A	61	The Solution Structure Of The Third Kunitz Domain O		1e-06
1tfx_C	58	Complex Of The Second Kunitz Domain Of Tissue Facto		2e-06
2jot_A	55	Nuclear Magnetic Resonance Studies On Huwentoxin-Xi		2e-06
4dtg_K	66	Hemostatic Effect Of A Monoclonal Antibody Mab 2021		2e-06
1dtx_A	59	Crystal Structure Of Alpha-Dendrotoxin From The Gre		3e-06
3btt_I	58	The Crystal Structures Of The Complexes Between Bov		3e-06
1tpa_I	58	The Geometry Of The Reactive Site And Of The Peptid		4e-06
1tpa_I	58	The Geometry Of The Reactive Site And Of The Peptid		1e-05
3tgi_I	65	Wild-Type Rat Anionic Trypsin Complexed With Bovine		4e-06
3tgi_I	65	Wild-Type Rat Anionic Trypsin Complexed With Bovine		1e-05
1pit_A	58	Determination Of A High-Quality Nuclear Magnetic Re		4e-06
1pit_A	58	Determination Of A High-Quality Nuclear Magnetic Re		2e-05
4tpi_I	58	The Refined 2.2-angstroms (0.22-nm) X-ray Crystal S		5e-06
4tpi_I	58	The Refined 2.2-angstroms (0.22-nm) X-ray Crystal S		1e-05
9pti_A	58	Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized		5e-06
9pti_A	58	Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized		1e-05
1p2k_I	58	Structural Consequences Of Accommodation Of Four No		5e-06
1p2k_I	58	Structural Consequences Of Accommodation Of Four No		9e-06
1uua_A	56	Solution Structure Of A Truncated Bovine Pancreatic		6e-06
1uua_A	56	Solution Structure Of A Truncated Bovine Pancreatic		3e-05
3btg_I	58	The Crystal Structures Of The Complexes Between Bov		6e-06
3btg_I	58	The Crystal Structures Of The Complexes Between Bov		2e-05
1t8l_B	59	Crystal Structure Of The P1 Met Bpti Mutant- Bovine		7e-06
1t8l_B	59	Crystal Structure Of The P1 Met Bpti Mutant- Bovine		1e-05
3btm_I	58	The Crystal Structures Of The Complexes Between Bov		7e-06
3btm_I	58	The Crystal Structures Of The Complexes Between Bov		1e-05
1p2j_I	58	Structural Consequences Of Accommodation Of Four No		7e-06
1p2j_I	58	Structural Consequences Of Accommodation Of Four No		1e-05
3bth_I	58	The Crystal Structures Of The Complexes Between Bov		7e-06
3bth_I	58	The Crystal Structures Of The Complexes Between Bov		2e-05
3bte_I	58	The Crystal Structures Of The Complexes Between Bov		8e-06
3bte_I	58	The Crystal Structures Of The Complexes Between Bov		2e-05
3btq_I	58	The Crystal Structures Of The Complexes Between Bov		8e-06
3btq_I	58	The Crystal Structures Of The Complexes Between Bov		2e-05
3p92_E	58	Human Mesotrypsin Complexed With Bovine Pancreatic		8e-06
3p92_E	58	Human Mesotrypsin Complexed With Bovine Pancreatic		3e-05
3p95_E	58	Human Mesotrypsin Complexed With Bovine Pancreatic		9e-06
3p95_E	58	Human Mesotrypsin Complexed With Bovine Pancreatic		2e-05
1ld5_A	58	Structure Of Bpti Mutant A16v Length = 58		1e-05
1ld5_A	58	Structure Of Bpti Mutant A16v Length = 58		2e-05
3btf_I	58	The Crystal Structures Of The Complexes Between Bov		1e-05
3btf_I	58	The Crystal Structures Of The Complexes Between Bov		2e-05
3btd_I	58	The Crystal Structures Of The Complexes Between The		1e-05
3btd_I	58	The Crystal Structures Of The Complexes Between The		2e-05
1adz_A	71	The Solution Structure Of The Second Kunitz Domain		1e-05
1ejm_B	58	Crystal Structure Of The Bpti Ala16leu Mutant In Co		1e-05
1ejm_B	58	Crystal Structure Of The Bpti Ala16leu Mutant In Co		2e-05
1ykt_B	56	TrypsinBPTI COMPLEX MUTANT Length = 56		1e-05
1qlq_A	58	Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant W		1e-05
1qlq_A	58	Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant W		2e-04
1uub_A	56	Solution Structure Of A Truncated Bovine Pancreatic		1e-05
1uub_A	56	Solution Structure Of A Truncated Bovine Pancreatic		2e-05
1fak_I	55	Human Tissue Factor Complexed With Coagulation Fact		1e-05
3btw_I	58	The Crystal Structures Of The Complexes Between Bov		1e-05
3btw_I	58	The Crystal Structures Of The Complexes Between Bov		3e-05
1bti_A	58	Crevice-Forming Mutants In The Rigid Core Of Bovine		1e-05
1bti_A	58	Crevice-Forming Mutants In The Rigid Core Of Bovine		3e-05
3jxa_A	383	Immunoglobulin Domains 1-4 Of Mouse Cntn4 Length =		2e-05
1jv8_A	58	Nmr Structure Of Bpti Mutant G37a Length = 58		2e-05
1jv8_A	58	Nmr Structure Of Bpti Mutant G37a Length = 58		4e-05
1dtk_A	57	The Nmr Solution Structure Of Dendrotoxin K From Th		2e-05
3kld_A	384	Ptprg Cntn4 Complex Length = 384		2e-05
1nag_A	58	Crevice-forming Mutants In The Rigid Core Of Bovine		2e-05
1nag_A	58	Crevice-forming Mutants In The Rigid Core Of Bovine		4e-05
2fi4_I	58	Crystal Structure Of A Bpti Variant (Cys14->ser) In		3e-05
2fi4_I	58	Crystal Structure Of A Bpti Variant (Cys14->ser) In		9e-05
2fi5_I	58	Crystal Structure Of A Bpti Variant (Cys38->ser) In		3e-05
2fi5_I	58	Crystal Structure Of A Bpti Variant (Cys38->ser) In		9e-05
1bpt_A	58	Crevice-Forming Mutants Of Bpti: Crystal Structures		3e-05
1bpt_A	58	Crevice-Forming Mutants Of Bpti: Crystal Structures		3e-05
2v9q_A	212	First And Second Ig Domains From Human Robo1 Length		4e-05
1fan_A	58	Crevice-Forming Mutants In The Rigid Core Of Bovine		4e-05
1fan_A	58	Crevice-Forming Mutants In The Rigid Core Of Bovine		9e-05
3laf_A	403	Structure Of Dcc, A Netrin-1 Receptor Length = 403		4e-05
2ftm_B	58	Crystal Structure Of Trypsin Complexed With The Bpt		4e-05
2ftm_B	58	Crystal Structure Of Trypsin Complexed With The Bpt		1e-04
2eo9_A	118	Solution Structure Of The Fifth Ig-Like Domain From		7e-05
1bf0_A	60	Calcicludine (Cac) From Green Mamba Dendroaspis Ang		9e-05
1bf0_A	60	Calcicludine (Cac) From Green Mamba Dendroaspis Ang		3e-04
2iep_A	192	Crystal Structure Of Immunoglobulin-Like Domains 1		9e-05
2j8h_A	197	Structure Of The Immunoglobulin Tandem Repeat A168-		1e-04
2ill_A	195	Anomalous Substructure Of Titin-A168169 Length = 19		1e-04
2v9t_A	117	Complex Between The Second Lrr Domain Of Slit2 And		1e-04
1aal_A	58	Structural Effects Induced By Mutagenesis Affected		2e-04
1aal_A	58	Structural Effects Induced By Mutagenesis Affected		4e-04
7pti_A	58	Structural Effects Induced By Removal Of A Disulfid		2e-04
7pti_A	58	Structural Effects Induced By Removal Of A Disulfid		5e-04
2om5_A	381	N-Terminal Fragment Of Human Tax1 Length = 381		2e-04
2fi3_I	58	Crystal Structure Of A Bpti Variant (Cys14->ser, Cy		2e-04
2fi3_I	58	Crystal Structure Of A Bpti Variant (Cys14->ser, Cy		7e-04
2nzi_A	305	Crystal Structure Of Domains A168-A170 From Titin L		2e-04
3pxh_A	201	Tandem Ig Domains Of Tyrosine Phosphatase Lar Lengt		2e-04
1bun_B	61	Structure Of Beta2-Bungarotoxin: Potassium Channel		3e-04
3p3y_A	404	Crystal Structure Of Neurofascin Homophilic Adhesio		3e-04
2edj_A	100	Solution Structure Of The Fifth Ig-Like Domain From		3e-04
1brb_I	58	Crystal Structures Of Rat Anionic Trypsin Complexed		4e-04
2wp3_O	109	Crystal Structure Of The Titin M10-Obscurin Like 1		5e-04
3knb_B	107	Crystal Structure Of The Titin C-Terminus In Comple		6e-04
1bih_A	395	Crystal Structure Of The Insect Immune Protein Hemo		7e-04
2yd3_A	202	Crystal Structure Of The N-Terminal Ig1-2 Module Of		8e-04

>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And Accessible Reactive-site Loop Length = 127

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAA 494
           ++Y++ +T  C  F YGGC GN N F     CQK C     P       S       E A
Sbjct: 21  RFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACG---APERVNDFESADFKTGCEPA 77
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
                   ++SG C  Q   W+++  +  C++F+YGGC GN N + +EE+CE +C
Sbjct: 78  --------ADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124

>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And Accessible Reactive-site Loop Length = 127

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG---- 550
           RN  C L ++ G C      +YF+  T +C  F YGGC GN N F T E+C++ CG    
Sbjct: 2   RNGFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPER 61
Query: 551 --EFRAED-PVGQRPAAVIG 567
             +F + D   G  PAA  G
Sbjct: 62  VNDFESADFKTGCEPAADSG 81

>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human Inter-Alpha-Inhibitor Complex Length = 147

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 431 GNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPR 490
           G   +++Y+  + +C+ FQYGGC GN N F  +  C + C                   R
Sbjct: 37  GMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC-------------------R 77
Query: 491 QEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
             AA    C L    GPC      W FD    +C  F YGGC+GN N+F +E++C   CG
Sbjct: 78  TVAA----CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCG 133

>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human Inter-Alpha-Inhibitor Complex Length = 147

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           + D C L   +GPC    + ++++  +  C++F YGGC GN N F TE++C + C
Sbjct: 22  KEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 76

>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain Of Alzheimer's Amyloid Beta-Protein Precursor Length = 58

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
          +++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C 
Sbjct: 2  REVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain Of Alzheimer's Amyloid Beta-Protein Precursor Length = 58

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 3   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of Trypsin Length = 56

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
           +++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C 
Sbjct: 1  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of Trypsin Length = 56

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 3   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At 0.95 Angstrom Length = 58

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
          DIC  P   G C +++L WYYD     C +F+YGGCGGN+N F +++ C+  CA
Sbjct: 3  DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA 56

>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At 0.95 Angstrom Length = 58

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           D+C L  + G C      WY+D NT  C  F YGGC GN N+F ++++CE++C
Sbjct: 3   DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55

>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein Inhibitor Variant (Appir15k) Length = 57

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
          ++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C 
Sbjct: 1  EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein Inhibitor Variant (Appir15k) Length = 57

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 1   EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 57

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
          ++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C 
Sbjct: 1  EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 57

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 1   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi Length = 54

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
          ++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C 
Sbjct: 1  EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi Length = 54

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 1   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54

>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein Inhibitor(Appi) Length = 52

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          +C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C
Sbjct: 1  VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52

>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein Inhibitor(Appi) Length = 52

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           +C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +C
Sbjct: 1   VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52

>pdb|3BYB|A Chain A, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine Protease Inhibitor From The Australian Common Brown Snake Venom Length = 59

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C L +++GPC  +  ++Y++ +  +C  FIYGGCEGNAN F T+E+CE  C 
Sbjct: 3   RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 58

>pdb|3D65|I Chain I, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine Protease Inhibitor From The Australian Common Brown Snake Venom, In Complex With Trypsin Length = 57

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C L +++GPC  +  ++Y++ +  +C  FIYGGCEGNAN F T+E+CE  C 
Sbjct: 1   RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 56

>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor Pathway Inhibitor-2 With Bovine Trypsin Length = 63

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          +ICL P   G C   +L +YYD     CRQF YGGC GN NNF T EAC   C
Sbjct: 7  EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59

>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor Pathway Inhibitor-2 With Bovine Trypsin Length = 63

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           ++C L  + GPC      +Y+DR T  C+ F+YGGCEGNAN F T E C+  C
Sbjct: 7   EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59

>pdb|2DDI|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1 Length = 70

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 492 EAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           EA   D C L +  GPC   E  W +     +C  F+YGGCEGN N F++ E CE  C
Sbjct: 3   EAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60

>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1 Length = 75

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 44  AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
            +D CL    +G C      WYYD  E  C+ F YGGC GN+NN++ EE C   C G
Sbjct: 18  TEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRG 74

>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1 Length = 75

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           D C   ++ G C      WY+D     C+SF+YGGC GN N +  EE+C   C
Sbjct: 20  DYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 72

>pdb|1CO7|I Chain I, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 99

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 480 AQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRF 539
           A TP    + + +A R D C     +GPC  +   ++++     CQ+F+YGGC    N F
Sbjct: 20  ASTPGCDTSNQAKAQRPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNF 79
Query: 540 NTEEQCERLCG 550
            + E C R CG
Sbjct: 80  KSAEDCMRTCG 90

>pdb|1JC6|A Chain A, Solution Structure Of Bungarus Faciatus Ix, A Kunitz-Type Chymotrypsin Inhibitor Length = 65

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           R   C L  E+G C     A+Y++ + ++CQ F YGGC GNAN F T ++C+R C
Sbjct: 3   RPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57

>pdb|3PXJ|A Chain A, Tandem Ig Repeats Of Dlar Length = 210

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCV 412
           E G+ V + C AIG P P   W K +  +D S+  Y L  DG LQI     +D G Y CV
Sbjct: 125 EVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-DGFLQIENSREEDQGKYECV 183
Query: 413 AANGIGDPIRKEFNVIVR 430
           A N +G    K  N+ V+
Sbjct: 184 AENSMGTEHSKATNLYVK 201

>pdb|1DEM|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel Blockers Length = 60

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
            LC L    G C Q+  A+Y+++   +C+ F + GC GN+NRF T E+C R C
Sbjct: 5   KLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTC 57

>pdb|2YD1|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Drosophila Receptor Protein Tyrosine Phosphatase Dlar Length = 212

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCV 412
           E G+ V + C AIG P P   W K +  +D S+  Y L  DG LQI     +D G Y CV
Sbjct: 123 EVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-DGFLQIENSREEDQGKYECV 181
Query: 413 AANGIGDPIRKEFNVIVR 430
           A N +G    K  N+ V+
Sbjct: 182 AENSMGTEHSKATNLYVK 199

>pdb|1IRH|A Chain A, The Solution Structure Of The Third Kunitz Domain Of Tissue Factor Pathway Inhibitor Length = 61

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 41  QFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           +F     CL PA  G C      +YY+S+  +CR F Y GCGGN+NNF +++ C   C  
Sbjct: 1   EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60
Query: 101 G 101
           G
Sbjct: 61  G 61

>pdb|1TFX|C Chain C, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 58

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           D CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 3   DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55

>pdb|2JOT|A Chain A, Nuclear Magnetic Resonance Studies On Huwentoxin-Xi From The Chinese Bird Spider Ornithoctonus Huwena Length = 55

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
           D C L S+ G C      WYF+  T  C  FIYGGC GN N+F T+E C + C +
Sbjct: 2   DTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCAK 54

>pdb|4DTG|K Chain K, Hemostatic Effect Of A Monoclonal Antibody Mab 2021 Blocking The Interaction Between Fxa And Tfpi In A Rabbit Hemophilia Model Length = 66

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           D CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 5   DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57

>pdb|1DTX|A Chain A, Crystal Structure Of Alpha-Dendrotoxin From The Green Mamba Venom And Its Comparison With The Structure Of Bovine Pancreatic Trypsin Inhibitor Length = 59

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           R  LC L    G C  +  A+Y+++   +C+ F + GC GN+NRF T E+C R C
Sbjct: 3   RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57

>pdb|3BTT|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPCT +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide Groups In Trypsin, Trypsinogen And Its Complexes With Inhibitors Length = 58

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide Groups In Trypsin, Trypsinogen And Its Complexes With Inhibitors Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 65

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 65

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic Resonance Solution Structure Of The Bovine Pancreatic Trypsin Inhibitor And Comparison With Three Crystal Structures Length = 58

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic Resonance Solution Structure Of The Bovine Pancreatic Trypsin Inhibitor And Comparison With Three Crystal Structures Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal Structure Of The Ternary Complex Formed By Bovine Trypsinogen, Valine-valine And The Arg15 Analogue Of Bovine Pancreatic Trypsin Inhibitor Length = 58

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal Structure Of The Ternary Complex Formed By Bovine Trypsinogen, Valine-valine And The Arg15 Analogue Of Bovine Pancreatic Trypsin Inhibitor Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized) Length = 58

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTCGG 57

>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized) Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTCG 56

>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non- Cognate Amino-Acid Residues In The S1 Pocket Of Bovine Trypsin And Chymotrypsin Length = 58

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non- Cognate Amino-Acid Residues In The S1 Pocket Of Bovine Trypsin And Chymotrypsin Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic Trypsin Inhibitor, 3-58 Bpti Length = 56

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 1   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 55

>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic Trypsin Inhibitor, 3-58 Bpti Length = 56

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 54

>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine Chymotrypsin Complex Length = 59

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 4   DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 58

>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine Chymotrypsin Complex Length = 59

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 2   RPDFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 57

>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non- Cognate Amino-Acid Residues In The S1 Pocket Of Bovine Trypsin And Chymotrypsin Length = 58

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non- Cognate Amino-Acid Residues In The S1 Pocket Of Bovine Trypsin And Chymotrypsin Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta-Trypsin And Ten P1 Variants Of Bpti. Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta-Trypsin And Ten P1 Variants Of Bpti. Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor Variant (Bpti-K15rR17G) Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor Variant (Bpti-K15rR17G) Length = 58

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC      ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor Variant (Bpti-K15rR17D) Length = 58

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor Variant (Bpti-K15rR17D) Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC      ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti. Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti. Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1ADZ|A Chain A, The Solution Structure Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor, Nmr, 30 Structures Length = 71

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
            CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 13  FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64

>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex With Bovine Trypsin Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex With Bovine Trypsin Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1YKT|B Chain B, TrypsinBPTI COMPLEX MUTANT Length = 56

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With Altered Binding Loop Sequence Length = 58

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With Altered Binding Loop Sequence Length = 58

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +G C  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s) Length = 56

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC    NNF + E C   C G
Sbjct: 1   DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCGG 55

>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s) Length = 56

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           D C     +GPC      ++++     CQ+F+YGGC   +N F + E C R CG
Sbjct: 1   DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCG 54

>pdb|1FAK|I Chain I, Human Tissue Factor Complexed With Coagulation Factor Viia Inhibited With A Bpti-Mutant Length = 55

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          A D CL+P   G C    L ++Y++    C+ FYYGGC   +NNF + E C   C
Sbjct: 1  APDFCLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55

>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine Beta- Trypsin And Ten P1 Variants Of Bpti Length = 58

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ + Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   + ++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|3JXA|A Chain A, Immunoglobulin Domains 1-4 Of Mouse Cntn4 Length = 383

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGI 408
           TV AE+G  V L C A+G P+P   W + +            + +G+L+I    ++DAG 
Sbjct: 213 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKS-NGILEIPNFQQEDAGS 271
Query: 409 YVCVAANGIGDPIRK 423
           Y CVA N  G  + K
Sbjct: 272 YECVAENSRGKNVAK 286

>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
           D CL+P   G C   ++ ++Y++    C+ F YG C   +NNF + E C   C G 
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTCGGA 58

>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a Length = 58

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YG C    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTCG 56

>pdb|1DTK|A Chain A, The Nmr Solution Structure Of Dendrotoxin K From The Venom Of Dendroaspis Polylepis Polylepis Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           C L    GPC ++  ++Y+     +C  F Y GC GNANRF T E+C R C
Sbjct: 5   CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55

>pdb|3KLD|A Chain A, Ptprg Cntn4 Complex Length = 384

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGI 408
           TV AE+G  V L C A+G P+P   W + +            + +G+L+I    ++DAG 
Sbjct: 214 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKS-NGILEIPNFQQEDAGS 272
Query: 409 YVCVAANGIGDPIRK 423
           Y CVA N  G  + K
Sbjct: 273 YECVAENSRGKNVAK 287

>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   + NF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTCGG 57

>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC      F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTCG 56

>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G     ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GP   +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGG    +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGG 57

>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGG     N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCG 56

>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++ ++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++ +     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56

>pdb|2V9Q|A Chain A, First And Second Ig Domains From Human Robo1 Length = 212

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----EVSIDGSDGHYKLTLDG 394
           PPR   +    +   +G   TL C A G P P   W KG    E   D    H  L   G
Sbjct: 9   PPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 395 VLQIVGLV-----RQDAGIYVCVAANGIGDPIRKEFNV---IVRGNYEQ 435
            L  + +V     R D G+YVCVA N +G+ +  + ++   I+R ++ Q
Sbjct: 68  SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQ 116

>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NN  + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTCGG 57

>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine Pancreatic Trypsin Inhibitor: Crystal Structures Of F22a, Y23a, N43g, And F45a Length = 58

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+YGGC    N   + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTCG 56

>pdb|3LAF|A Chain A, Structure Of Dcc, A Netrin-1 Receptor Length = 403

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 125/342 (36%), Gaps = 66/342 (19%)
Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A       + S  A      ++ VA P RF + +E ++ A  G+ V L+C  IG P+P
Sbjct: 99  CEASLGDSGSIISRTA------KVMVAGPLRFLSQTE-SITAFMGDTVLLKCEVIGDPMP 151
Query: 154 VYTWSKGEV--------SRKFFL-RGFISANDLCFLESESGPCTQQEAAWYFDRNS---- 200
              W K +         SR   L  G +  + L   +S    C+ +  A     N     
Sbjct: 152 TIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVR 211
Query: 201 FITMPELTPNTFLFQW---TCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETR 257
            ++ P L    +  Q       I GK+A   C   C +  P  PS T    + V    ++
Sbjct: 212 ILSDPGLHRQLYFLQRPSNVIAIEGKDAVLEC---CVSGYPP-PSFTWLRGEEVIQLRSK 267
Query: 258 ETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDIXXXX 317
           +   +                 N+   N  DD   T           Y+C     +    
Sbjct: 268 KYSLLG--------------GSNLLISNVTDDDSGT-----------YTCV----VTYKN 298
Query: 318 XXVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 377
             +S +  +    P        P F N+    + A E   +   C   G P+P   W K 
Sbjct: 299 ENISASAELTVLVP--------PWFLNHPS-NLYAYESMDIEFECAVSGKPVPTVNWMKN 349
Query: 378 EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
              +  SD ++++     L+I+G+V+ D G Y CVA N  G+
Sbjct: 350 GDVVIPSD-YFQIVGGSNLRILGVVKSDEGFYQCVAENEAGN 390

>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti Variant (Tyr35- >gly) Length = 58

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F  GGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTCGG 57

>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti Variant (Tyr35- >gly) Length = 58

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++     CQ+F+ GGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTCG 56

>pdb|2EO9|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human Roundabout Homo1 Length = 118

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVC 411
           A +G FV L C+A G P+P   W K  V +   D   K   +GVLQI      D G Y C
Sbjct: 21  AVDGTFV-LSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTC 79
Query: 412 VAANGIGD 419
           +A+   G+
Sbjct: 80  IASTPSGE 87

>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis Angusticeps, Nmr, 15 Structures Length = 60

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 48  CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           C +P  IG C     ++Y+     +C  F + GCGGN N F T   C+ +C G
Sbjct: 7   CKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG 59

>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis Angusticeps, Nmr, 15 Structures Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 506 GPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           G C +Q +++YF     +C  F++ GC GNANRF T  +C + C
Sbjct: 14  GSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57

>pdb|2IEP|A Chain A, Crystal Structure Of Immunoglobulin-Like Domains 1 And 2 Of The Receptor Tyrosine Kinase Musk Length = 192

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 331 PYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL 390
           P  P I +P         TV+A      T  C    YP P  +W++ ++ I   D  Y +
Sbjct: 5   PKAPVITTPLE-------TVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSI 57
Query: 391 TLDG-VLQIVGLVRQDAGIYVCVAANGIGDPI 421
             +G +L I+ +   D GIY C A NG+G  +
Sbjct: 58  RENGQLLTILSVEDSDDGIYCCTANNGVGGAV 89

>pdb|2J8H|A Chain A, Structure Of The Immunoglobulin Tandem Repeat A168-A169 Of Titin Length = 197

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQD 405
           V A  G  V+++    G P PV TW KG+  ID ++GHY++    +   ++   G+ R+D
Sbjct: 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 172
Query: 406 AGIYVCVAANGIG 418
           AG YV  A N  G
Sbjct: 173 AGFYVVCAKNRFG 185

>pdb|2ILL|A Chain A, Anomalous Substructure Of Titin-A168169 Length = 195

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQD 405
           V A  G  V+++    G P PV TW KG+  ID ++GHY++    +   ++   G+ R+D
Sbjct: 112 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 170
Query: 406 AGIYVCVAANGIG 418
           AG YV  A N  G
Sbjct: 171 AGFYVVCAKNRFG 183

>pdb|2V9T|A Chain A, Complex Between The Second Lrr Domain Of Slit2 And The First Ig Domain From Robo1 Length = 117

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----EVSIDGSDGHYKLTLDG 394
           PPR   +    +   +G   TL C A G P P   W KG    E   D    H  L   G
Sbjct: 9   PPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 395 VLQIVGLV-----RQDAGIYVCVAANGIGDPIRKE 424
            L  + +V     R D G+YVCVA N +G+ +  +
Sbjct: 68  SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD 102

>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By Crystal Packing Factors: The Structure Of A 30-51 Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor Length = 58

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++     + F YGGC   +NNF + E     C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTCGG 57

>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By Crystal Packing Factors: The Structure Of A 30-51 Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor Length = 58

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++      Q+F+YGGC    N F + E   R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTCG 56

>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide Bridge. The X-Ray Structure Of The C30a(Slash)c51a Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6 Angstroms Length = 58

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++     + F YGGC   +NNF + E     C G
Sbjct: 3   DFCLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTCGG 57

>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide Bridge. The X-Ray Structure Of The C30a(Slash)c51a Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6 Angstroms Length = 58

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GPC  +   ++++      Q+F+YGGC    N F + E   R CG
Sbjct: 1   RPDFCLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTCG 56

>pdb|2OM5|A Chain A, N-Terminal Fragment Of Human Tax1 Length = 381

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
           G  VTL C A G P+P   W K    +DGS      T +  LQI  +  +D G Y C A 
Sbjct: 221 GQQVTLECFAFGNPVPRIKWRK----VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAE 276
Query: 415 NGIG-DPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQW 464
           N  G D ++    V  +  + +   D + D     ++G       R   +W
Sbjct: 277 NSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRW 327

>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser, Cys38->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G     ++ ++Y++    C+ F YGG    +NNF + E C   C G
Sbjct: 3   DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGG 57

>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser, Cys38->ser) In Complex With Trypsin Length = 58

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +GP   +   ++++     CQ+F+YGG     N F + E C R CG
Sbjct: 1   RPDFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCG 56

>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin Length = 305

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIV----GLVRQD 405
           V A  G  V+++    G P PV TW KG+  ID ++GHY++ +      +    G+ R+D
Sbjct: 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 172
Query: 406 AGIYVCVAANGIG 418
           AG YV  A N  G
Sbjct: 173 AGFYVVCAKNRFG 185

>pdb|3PXH|A Chain A, Tandem Ig Domains Of Tyrosine Phosphatase Lar Length = 201

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
           E+G   T+ C A G P P  +W K  + +D   S+G  K    G LQI      D G Y 
Sbjct: 122 EKGRTATMLCAAGGNPDPEISWFKDFLPVDPAASNGRIKQLRSGALQIESSEESDQGKYE 181
Query: 411 CVAANGIGDPIRKEFNVIVR 430
           CVA N  G       N+ VR
Sbjct: 182 CVATNSAGTRYSAPANLYVR 201

>pdb|1BUN|B Chain B, Structure Of Beta2-Bungarotoxin: Potassium Channel Binding By Kunitz Modules And Targeted Phospholipase Action Length = 61

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          C +P     C   V  +YY     RC QF YGGC GN N+F ++  C+  C
Sbjct: 7  CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCEC 57

>pdb|3P3Y|A Chain A, Crystal Structure Of Neurofascin Homophilic Adhesion Complex In Space Group P6522 Length = 404

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
           G  + L CIA G P P   W K    +      ++   +  L+I  +  +D+G Y C+A+
Sbjct: 237 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE-NFNKALRITNVSEEDSGEYFCLAS 295
Query: 415 NGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGG--CQGNHN-RFNDQWSCQKRCV 471
           N +G  IR   +V V+     W  +       P + G   C+ N N +   QW      +
Sbjct: 296 NKMGS-IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPL 353
Query: 472 QNIPPPDPAQTPSTTLAPRQEAARNDLCFLESE 504
           Q+ PP            P +E A + + F +++
Sbjct: 354 QSAPP-----------NPNREVAGDTIIFRDTQ 375

>pdb|2EDJ|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human Roundabout Homolog 2 Length = 100

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 360 LRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
           L+C A G P+PV +W K   +  G D    +   G LQI  L   D G Y CVA +  G+
Sbjct: 28  LKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGE 87

>pdb|1BRB|I Chain I, Crystal Structures Of Rat Anionic Trypsin Complexed With The Protein Inhibitors Appi And Bpti Length = 58

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT 102
           D   +P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C  R AGG 
Sbjct: 3   DFAGEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCM-RTAGGA 58

>pdb|2WP3|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig Complex Length = 109

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
           SPP F  +  P V    G    L+C+ +G P PV  W KG   +  S+       DG   
Sbjct: 13  SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEH 70
Query: 396 -LQIVGLVRQDAGIYVCVAAN 415
            L +   +  DAG+YVC A N
Sbjct: 71  GLLLTAALPTDAGVYVCRARN 91

>pdb|3KNB|B Chain B, Crystal Structure Of The Titin C-Terminus In Complex With Obscurin- Like 1 Length = 107

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
           SPP F  +  P V    G    L+C+ +G P PV  W KG   +  S+       DG   
Sbjct: 12  SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEH 69
Query: 396 -LQIVGLVRQDAGIYVCVAAN 415
            L +   +  DAG+YVC A N
Sbjct: 70  GLLLTAALPTDAGVYVCRARN 90

>pdb|1BIH|A Chain A, Crystal Structure Of The Insect Immune Protein Hemolin: A New Domain Arrangement With Implications For Homophilic Adhesion Length = 395

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
           + S P++    E  +  ++G  VT+ C   G P P   WS     + G  G   +T D  
Sbjct: 305 VVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG--GRATVT-DSG 361
Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGN 432
           L I G+   D G Y C A N  GD   K F  +V+ N
Sbjct: 362 LVIKGVKNGDKGYYGCRATNEHGD---KYFETLVQVN 395

>pdb|2YD3|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human Receptor Protein Tyrosine Phosphatase Sigma Length = 202

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIY 409
            E     T+ C A G P P  TW K  + +D   S+G  K    G LQI      D G Y
Sbjct: 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179
Query: 410 VCVAANGIGDPIRKEFNVIVR 430
            CVA N  G       N+ VR
Sbjct: 180 ECVATNSAGVRYSSPANLYVR 200

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	615
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	4e-31
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	2e-16
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	7e-16
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	2e-11
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	3e-26
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	1e-17
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	2e-16
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	2e-16
1dtk_A	57	Dendrotoxin K; presynaptic neurotoxin; NMR {Dendro	6e-22
1dtk_A	57	Dendrotoxin K; presynaptic neurotoxin; NMR {Dendro	7e-19
1dtk_A	57	Dendrotoxin K; presynaptic neurotoxin; NMR {Dendro	2e-12
1aap_A	58	Alzheimer'S disease amyloid A4 protein; proteinase	4e-21
1aap_A	58	Alzheimer'S disease amyloid A4 protein; proteinase	4e-19
1aap_A	58	Alzheimer'S disease amyloid A4 protein; proteinase	4e-12
3byb_A	59	Textilinin, textilinin-1; BPTI-like, beta hairpin,	6e-21
3byb_A	59	Textilinin, textilinin-1; BPTI-like, beta hairpin,	1e-19
3byb_A	59	Textilinin, textilinin-1; BPTI-like, beta hairpin,	4e-12
1irh_A	61	Tissue factor pathway inhibitor; non-protease inhi	7e-21
1irh_A	61	Tissue factor pathway inhibitor; non-protease inhi	4e-19
1irh_A	61	Tissue factor pathway inhibitor; non-protease inhi	2e-12
1dtx_A	59	Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {	8e-21
1dtx_A	59	Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {	2e-19
1dtx_A	59	Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {	3e-12
1zr0_B	63	TFPI-2, tissue factor pathway inhibitor 2, PP5; se	1e-20
1zr0_B	63	TFPI-2, tissue factor pathway inhibitor 2, PP5; se	2e-19
1zr0_B	63	TFPI-2, tissue factor pathway inhibitor 2, PP5; se	3e-12
1co7_I	99	BPTI, bovine pancreatic trypsin inhibitor; complex	1e-20
1co7_I	99	BPTI, bovine pancreatic trypsin inhibitor; complex	1e-19
1co7_I	99	BPTI, bovine pancreatic trypsin inhibitor; complex	3e-12
1kth_A	58	Collagen alpha 3(VI) chain; anisotropic refinement	1e-20
1kth_A	58	Collagen alpha 3(VI) chain; anisotropic refinement	3e-19
1kth_A	58	Collagen alpha 3(VI) chain; anisotropic refinement	6e-12
1g6x_A	58	Pancreatic trypsin inhibitor; serine protease inhi	1e-20
1g6x_A	58	Pancreatic trypsin inhibitor; serine protease inhi	7e-20
1g6x_A	58	Pancreatic trypsin inhibitor; serine protease inhi	4e-12
1bf0_A	60	Calcicludine; calcium channel blocker; NMR {Dendro	2e-20
1bf0_A	60	Calcicludine; calcium channel blocker; NMR {Dendro	1e-18
1bf0_A	60	Calcicludine; calcium channel blocker; NMR {Dendro	2e-12
3m7q_B	61	Kunitz-type proteinase inhibitor SHPI-1; trypsin-i	2e-20
3m7q_B	61	Kunitz-type proteinase inhibitor SHPI-1; trypsin-i	3e-19
3m7q_B	61	Kunitz-type proteinase inhibitor SHPI-1; trypsin-i	2e-12
2ddi_A	70	WAP, follistatin/kazal, immunoglobulin, kunitz and	2e-20
2ddi_A	70	WAP, follistatin/kazal, immunoglobulin, kunitz and	2e-19
2ddi_A	70	WAP, follistatin/kazal, immunoglobulin, kunitz and	7e-12
3aub_A	58	BPTI, bovine pancreatic trypsin inhibitor; serine	3e-20
3aub_A	58	BPTI, bovine pancreatic trypsin inhibitor; serine	1e-19
3aub_A	58	BPTI, bovine pancreatic trypsin inhibitor; serine	4e-12
1yc0_I	75	Kunitz-type protease inhibitor 1; hydrolase/inhibi	3e-20
1yc0_I	75	Kunitz-type protease inhibitor 1; hydrolase/inhibi	8e-19
1yc0_I	75	Kunitz-type protease inhibitor 1; hydrolase/inhibi	6e-12
4dtg_K	66	Tissue factor pathway inhibitor; antibody, blood c	3e-20
4dtg_K	66	Tissue factor pathway inhibitor; antibody, blood c	7e-20
4dtg_K	66	Tissue factor pathway inhibitor; antibody, blood c	2e-12
1bun_B	61	BETA2-bungarotoxin; hydrolase, presynaptic neuroto	4e-20
1bun_B	61	BETA2-bungarotoxin; hydrolase, presynaptic neuroto	6e-19
1bun_B	61	BETA2-bungarotoxin; hydrolase, presynaptic neuroto	2e-12
1y62_A	60	Conkunitzin-S1; alpha helix, beta sheet, 310 helix	4e-20
1y62_A	60	Conkunitzin-S1; alpha helix, beta sheet, 310 helix	4e-19
1y62_A	60	Conkunitzin-S1; alpha helix, beta sheet, 310 helix	4e-12
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	5e-20
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	8e-18
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	3e-06
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	5e-05
3aug_A	65	BPTI, bovine pancreatic trypsin inhibitor; serine	5e-20
3aug_A	65	BPTI, bovine pancreatic trypsin inhibitor; serine	1e-19
3aug_A	65	BPTI, bovine pancreatic trypsin inhibitor; serine	1e-13
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	7e-20
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	2e-04
1adz_A	71	TFPI, EPI, LACI, tissue factor pathway inhibitor;	7e-20
1adz_A	71	TFPI, EPI, LACI, tissue factor pathway inhibitor;	1e-19
1adz_A	71	TFPI, EPI, LACI, tissue factor pathway inhibitor;	5e-12
1jc6_A	65	Venom basic protease inhibitors IX and VIIIB; snak	8e-20
1jc6_A	65	Venom basic protease inhibitors IX and VIIIB; snak	1e-19
1jc6_A	65	Venom basic protease inhibitors IX and VIIIB; snak	5e-12
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	1e-19
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	6e-11
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	4e-05
2kcr_A	61	Anntoxin; protein; NMR {Hyla annectans} Length = 6	1e-19
2kcr_A	61	Anntoxin; protein; NMR {Hyla annectans} Length = 6	5e-19
2kcr_A	61	Anntoxin; protein; NMR {Hyla annectans} Length = 6	5e-12
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	1e-19
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	1e-04
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	8e-19
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	5e-13
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	9e-06
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	9e-05
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	2e-18
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	9e-14
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	1e-04
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	4e-04
2jot_A	55	Huwentoxin-11; proteinase inhibitor; NMR {Ornithoc	2e-18
2jot_A	55	Huwentoxin-11; proteinase inhibitor; NMR {Ornithoc	2e-17
2jot_A	55	Huwentoxin-11; proteinase inhibitor; NMR {Ornithoc	3e-10
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	8e-18
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	1e-17
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	9e-06
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	1e-05
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	1e-17
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	3e-15
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	2e-13
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	4e-12
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	7e-06
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	1e-04
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	2e-17
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	2e-13
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	4e-05
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	6e-05
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	2e-17
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	1e-13
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	9e-06
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	3e-17
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	4e-16
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-14
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-11
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	1e-06
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	4e-04
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	7e-04
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	3e-17
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	4e-14
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	9e-11
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	1e-05
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	8e-05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	6e-17
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	7e-14
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	2e-13
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	3e-12
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	5e-06
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	7e-05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	6e-04
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	7e-17
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	4e-16
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	7e-06
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	3e-04
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	7e-17
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	2e-13
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	2e-04
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	7e-17
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	9e-16
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	6e-06
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	2e-05
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	2e-16
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	3e-15
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	1e-13
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	4e-13
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	3e-06
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	2e-05
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	5e-04
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	2e-16
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	8e-08
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	2e-04
2e7c_A	118	Myosin-binding protein C, fast-type; IG-like domai	2e-16
2e7c_A	118	Myosin-binding protein C, fast-type; IG-like domai	5e-05
1gl4_B	98	Basement membrane-specific heparan sulfate proteog	2e-16
1gl4_B	98	Basement membrane-specific heparan sulfate proteog	7e-05
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	3e-16
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	5e-13
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	7e-11
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	2e-04
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	4e-04
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	3e-16
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	5e-16
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	3e-05
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	3e-04
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	4e-16
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	9e-13
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	2e-11
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	1e-09
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	7e-07
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	5e-05
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	4e-16
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	3e-15
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	4e-15
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	1e-13
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	2e-12
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	8e-12
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	2e-09
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	8e-07
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	6e-05
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	2e-04
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	3e-04
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	3e-04
1u2h_A	99	APEG-1, aortic preferentially expressed protein 1;	4e-16
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	6e-16
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	8e-16
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	1e-13
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	4e-06
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	3e-05
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	6e-16
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	1e-05
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	7e-16
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	4e-15
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	3e-14
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	6e-14
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	4e-06
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	1e-05
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	2e-04
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	5e-04
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	9e-16
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	1e-15
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	3e-14
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	2e-05
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	8e-05
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	4e-04
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	1e-15
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	2e-06
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	1e-15
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	5e-04
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	1e-15
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	1e-05
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	1e-15
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	9e-15
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	3e-14
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	4e-14
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	4e-14
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	1e-13
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	3e-06
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	3e-05
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	3e-04
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	4e-04
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	4e-04
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	5e-04
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	1e-15
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	9e-12
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	5e-11
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	2e-04
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	2e-15
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	3e-04
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	2e-15
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	2e-15
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	2e-04
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	2e-15
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	3e-04
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	2e-15
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	2e-12
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	2e-11
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	9e-05
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	2e-15
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	5e-15
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	3e-06
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	2e-04
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	2e-15
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	1e-14
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	7e-14
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	1e-09
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	1e-09
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	2e-08
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	6e-06
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	2e-04
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	4e-15
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	2e-13
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	5e-04
2ens_A	96	Advanced glycosylation END product-specific recept	4e-15
2ens_A	96	Advanced glycosylation END product-specific recept	8e-05
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	6e-15
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	8e-15
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	4e-04
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	8e-15
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	6e-04
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	8e-15
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	2e-04
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	1e-14
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	1e-14
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	8e-04
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	1e-14
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	9e-05
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	1e-14
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	6e-11
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	9e-07
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	2e-04
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	1e-14
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	8e-13
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	3e-04
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	1e-14
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	5e-12
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	4e-09
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	7e-09
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	9e-06
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	1e-14
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	6e-12
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	7e-05
2ckn_A	95	Basic fibroblast growth factor receptor 1; kinase,	2e-14
2kkq_A	116	Myotilin; unknown function, actin-binding, cell me	2e-14
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-14
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	4e-13
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	5e-13
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	5e-12
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-11
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	1e-10
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	7e-10
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-05
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-04
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	5e-04
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	3e-14
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	5e-10
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	4e-06
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	2e-04
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	4e-14
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	2e-08
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	5e-04
2dm2_A	110	Palladin; beta-sandwich, KIAA0992, actin-associate	4e-14
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	4e-14
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	3e-04
2ch8_A	201	BARF1, P33, 33 kDa early protein; viral protein, i	4e-14
2ch8_A	201	BARF1, P33, 33 kDa early protein; viral protein, i	2e-06
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	4e-14
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	2e-12
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	4e-14
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	4e-11
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	8e-06
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	4e-14
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	2e-11
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	2e-04
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	4e-14
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	2e-04
2dm3_A	110	KIAA0992 protein, palladin; beta-sandwich, myopall	5e-14
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	5e-14
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	9e-13
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	2e-04
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	5e-04
2yr3_A	99	Myosin light chain kinase, smooth muscle; IG domai	6e-14
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	1e-13
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	2e-04
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	4e-04
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	1e-13
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	8e-13
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	4e-04
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	5e-04
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	1e-13
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	2e-08
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	2e-13
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	9e-12
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	1e-05
1g1c_A	99	Immunoglobulin-like domain I1 from titin; immunogl	2e-13
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	5e-13
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	7e-13
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	6e-11
2cry_A	122	KIN of IRRE-like protein 3; IG fold, KIN of irregu	6e-13
2cry_A	122	KIN of IRRE-like protein 3; IG fold, KIN of irregu	1e-04
1fhg_A	154	Telokin; immunoglobulin fold, beta barrel, contrac	1e-12
1nn8_R	302	CD155 antigen, poliovirus receptor; icosahedral vi	1e-12
1nn8_R	302	CD155 antigen, poliovirus receptor; icosahedral vi	2e-07
1nn8_R	302	CD155 antigen, poliovirus receptor; icosahedral vi	2e-04
1wwb_X	103	Protein (brain derived neurotrophic factor recepto	1e-12
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	2e-12
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	3e-12
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	2e-09
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	1e-08
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	2e-07
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	6e-05
3qp3_A	103	Titin; I-SET IG-like, sarcomere, M-BAND, transfera	2e-12
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	2e-12
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	8e-11
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	3e-09
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	6e-09
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	3e-07
2id5_A	477	Lingo-1, leucine rich repeat neuronal 6A; CNS-spec	3e-12
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	4e-12
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	1e-08
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	2e-05
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	5e-12
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	9e-05
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	4e-04
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	6e-12
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	7e-12
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	7e-12
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	2e-06
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	1e-11
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	1e-07
2yuv_A	100	Myosin-binding protein C, SLOW-type; SLOW-type myo	1e-11
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	1e-11
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	5e-07
1pd6_A	104	Cardiac MYBP-C;, myosin-binding protein C, cardiac	2e-11
2edf_A	103	Obscurin; beta-sandwich, IG-fold, structural genom	2e-11
2bk8_A	97	Connectin, M1, titin heart isoform N2-B; IG domain	3e-11
2cr6_A	115	KIAA1556 protein, obscurin; IG-fold, immunoglobuli	4e-11
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	5e-11
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	1e-05
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	5e-11
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	3e-06
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	7e-11
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	1e-05
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	5e-05
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	2e-04
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	8e-11
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	3e-09
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	6e-09
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	3e-05
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	1e-10
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	5e-08
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	3e-07
2xot_A	361	Amphoterin-induced protein 1; cell adhesion, neuro	2e-10
2e7b_A	103	Obscurin; IG-like domain, structural genomics, NPP	3e-10
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	3e-10
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	2e-09
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	2e-05
1waa_A	93	Titin; metal binding protein, calmodulin-binding,	3e-10
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	4e-10
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	1e-06
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	1e-05
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	2e-05
2eny_A	104	Obscurin; beta-sandwich, IG-fold, structural genom	4e-10
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	5e-10
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	1e-07
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	6e-10
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	1e-04
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	7e-10
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	1e-04
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	9e-10
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	1e-08
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	1e-06
1he7_A	126	High affinity nerve growth factor receptor; transf	9e-10
2eo1_A	102	OBSCN protein, cDNA FLJ14124 FIS, clone mamma10024	1e-09
2e6p_A	104	Obscurin-like protein 1; IG-like domain, structura	1e-09
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	1e-09
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	4e-04
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	1e-09
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	9e-07
2cpc_A	113	KIAA0657 protein; immunoglobulin domain, IG domain	2e-09
2edk_A	101	Myosin-binding protein C, fast-type; IG fold, fast	2e-09
2yuz_A	100	Myosin-binding protein C, SLOW-type; immunoglobuli	2e-09
3s35_X	122	Vascular endothelial growth factor receptor 2; ant	3e-09
2dku_A	103	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	3e-09
3so5_A	112	LIG-3, leucine-rich repeats and immunoglobulin-lik	3e-09
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	3e-09
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	2e-04
2dav_A	126	SLOW MYBP-C, myosin-binding protein C, SLOW-type;	5e-09
1sy6_A	204	T-cell surface glycoprotein CD3 gamma/epsilon chai	6e-09
1sy6_A	204	T-cell surface glycoprotein CD3 gamma/epsilon chai	7e-07
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	7e-09
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	5e-06
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	3e-05
2dm7_A	108	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	8e-09
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	9e-09
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	3e-08
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	2e-06
3zyj_A	440	Leucine-rich repeat-containing protein 4C; cell ad	1e-08
2dlt_A	106	Myosin binding protein C, fast-type; IG-like domai	1e-08
3zyi_A	452	Leucine-rich repeat-containing protein 4; cell adh	1e-08
3ngg_A	50	Omwaprin-A; venom protein, racemic protein crystal	2e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-08
2k1m_A	95	Myosin-binding protein C, cardiac-type; IG-I domai	2e-08
2edh_A	113	Obscurin; structural genomics, NPPSFA, national pr	2e-08
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	2e-08
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	8e-04
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	2e-08
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	1e-06
1x44_A	103	Myosin-binding protein C, SLOW-type; IG-like domai	4e-08
3cx2_A	108	Myosin-binding protein C, cardiac-type; protonatio	1e-07
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	4e-07
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	4e-07
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	5e-07
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	2e-04
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	7e-07
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	1e-04
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	3e-06
3rbg_A	124	Cytotoxic and regulatory T-cell molecule; IGV, crt	6e-06
3shs_A	304	HOC head outer capsid protein; immunoglobulin-like	8e-06
3shs_A	304	HOC head outer capsid protein; immunoglobulin-like	1e-04
3shs_A	304	HOC head outer capsid protein; immunoglobulin-like	6e-04
2edo_A	121	CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte	9e-06
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	2e-05
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	8e-05
3q0h_A	117	T cell immunoreceptor with IG and ITIM domains; im	4e-05
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	6e-05
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	3e-04
1udk_A	51	Nawaprin; antiparallel beta-sheet, spiral backbone	9e-05
1fle_I	57	Elafin; hydrolase, serine protease, 3D-structure,	1e-04
1gsm_A	210	Madcam-1, mucosal addressin cell adhesion molecule	2e-04
3m45_A	108	Cell adhesion molecule 2; IG fold, dimer, disulfid	2e-04
2edn_A	118	Myosin-binding protein C, fast-type; beta-sandwich	3e-04
1olz_A	663	Semaphorin 4D; developmental protein, CD100, beta-	4e-04
2pet_A	231	Lutheran blood group glycoprotein; immunoglobulin	4e-04
2pet_A	231	Lutheran blood group glycoprotein; immunoglobulin	8e-04
2dru_A	180	Chimera of CD48 antigen and T-cell surface antige;	4e-04
2z7f_I	50	Antileukoproteinase; serine protease, serine prote	4e-04
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	4e-04
2ptt_A	110	CD48 antigen; CD244, CD48, NK cell receptor, X-RAY	6e-04
3nvq_A	590	Semaphorin-7A; beta-propeller, signaling, signalin	8e-04

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus} Length = 127

 Score =  116 bits (293), Expect = 4e-31
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP 489
           +    ++Y++ +T  C  F YGGC GN N F     CQK C       D           
Sbjct: 16  KALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPERVNDFESAD------ 69

Query: 490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
                    C   ++SG C  Q   W+++  +  C++F+YGGC GN N + +EE+CE +C
Sbjct: 70  -----FKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124

Query: 550 G 550
            
Sbjct: 125 K 125

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus} Length = 127

 Score = 75.3 bits (185), Expect = 2e-16
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
            C  PA  G C   +  +Y+++   +C  F YGGCGGN+NNF T E CQ  C
Sbjct: 4  GFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKAC 56

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus} Length = 127

 Score = 73.4 bits (180), Expect = 7e-16
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           RN  C L ++ G C      +YF+  T +C  F YGGC GN N F T E+C++ CG
Sbjct: 2   RNGFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACG 57

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus} Length = 127

 Score = 60.7 bits (147), Expect = 2e-11
 Identities = 24/97 (24%), Positives = 31/97 (31%), Gaps = 34/97 (35%)

Query: 4   CFLQFIAKDICLQPAVIGDCANYVLTWYYDSNTSCFPQFIAKDICLQPAVIGDCANYVLT 63
            F     K  C   A  G CA  +  W+Y+  +                           
Sbjct: 64  DFESADFKTGCEPAADSGSCAGQLERWFYNVQSG-------------------------- 97

Query: 64  WYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
                    C  F YGGCGGN NN+ +EE C+  C  
Sbjct: 98  --------ECETFVYGGCGGNDNNYESEEECELVCKN 126

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1 Length = 147

 Score =  103 bits (258), Expect = 3e-26
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP 489
            G   +++Y+  + +C+ FQYGGC GN N F  +  C + C        P          
Sbjct: 36  MGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAACNLPIVR------- 88

Query: 490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
                           GPC      W FD    +C  F YGGC+GN N+F +E++C   C
Sbjct: 89  ----------------GPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 132

Query: 550 GEFRAEDP 557
           G     D 
Sbjct: 133 GVPGDGDE 140

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1 Length = 147

 Score = 78.9 bits (194), Expect = 1e-17
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 22/112 (19%)

Query: 11  KDICLQPAVIGDCANYVLTWYYDSNT-SCFP-----------QFIAKDICLQ-------- 50
           +D C      G C      ++Y+  + +C              F+ +  CLQ        
Sbjct: 23  EDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAAC 82

Query: 51  --PAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
             P V G C  ++  W +D+++ +C  F YGGC GN N F +E+ C+  C  
Sbjct: 83  NLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGV 134

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1 Length = 147

 Score = 75.8 bits (186), Expect = 2e-16
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 477 PDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNA 536
           P   +         +   + D C L   +GPC    + ++++  +  C++F YGGC GN 
Sbjct: 4   PQEEEGSGGGQLVTEVTKKEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNG 63

Query: 537 NRFNTEEQCERLCGEF 552
           N F TE++C + C   
Sbjct: 64  NNFVTEKECLQTCRTV 79

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1 Length = 147

 Score = 75.8 bits (186), Expect = 2e-16
 Identities = 20/66 (30%), Positives = 26/66 (39%)

Query: 33 DSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEE 92
                      +D C      G C      ++Y+     C  F YGGC GN NNF+TE+
Sbjct: 11 GGGQLVTEVTKKEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEK 70

Query: 93 ACQARC 98
           C   C
Sbjct: 71 ECLQTC 76

>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1 Length = 57

 Score = 88.1 bits (219), Expect = 6e-22
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 44  AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           A   C  P  IG C   + ++YY     +C  F Y GCGGN N F T E C+  C G
Sbjct: 1   AAKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG 57

>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1 Length = 57

 Score = 79.6 bits (197), Expect = 7e-19
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             C L    GPC ++  ++Y+     +C  F Y GC GNANRF T E+C R C
Sbjct: 3   KYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55

>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1 Length = 57

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           +     +YY      C PF Y GC GN NRF     C++ CV
Sbjct: 15  KRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56

>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E Length = 58

 Score = 86.1 bits (214), Expect = 4e-21
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
           +++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C   
Sbjct: 2   REVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSA 58

>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E Length = 58

 Score = 80.0 bits (198), Expect = 4e-19
 Identities = 25/54 (46%), Positives = 34/54 (62%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 3   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E Length = 58

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +WY+D     C PF YGGC GN N F+ +  C   C
Sbjct: 15  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55

>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I Length = 59

 Score = 85.8 bits (213), Expect = 6e-21
 Identities = 25/56 (44%), Positives = 34/56 (60%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
            D C  PA  G C     ++YY+  E +C +F YGGC GN NNF+T+E C++ CA 
Sbjct: 4   PDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCAA 59

>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I Length = 59

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 26/56 (46%), Positives = 38/56 (67%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C L +++GPC  +  ++Y++ +  +C  FIYGGCEGNAN F T+E+CE  C 
Sbjct: 3   RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 58

>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I Length = 59

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R  +  +YY+ D   C  F YGGC+GN N F  +  C+  C
Sbjct: 17  RVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 57

>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 61

 Score = 85.4 bits (212), Expect = 7e-21
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 41  QFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           +F     CL PA  G C      +YY+S+  +CR F Y GCGGN+NNF +++ C   C  
Sbjct: 1   EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

Query: 101 G 101
           G
Sbjct: 61  G 61

>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 61

 Score = 80.4 bits (199), Expect = 4e-19
 Identities = 18/60 (30%), Positives = 30/60 (50%)

Query: 492 EAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
           E      C   ++ G C   E  +Y++    +C+ F Y GC GN N F ++++C R C +
Sbjct: 1   EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 61

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           R N  ++YY+     C+PF+Y GC GN N F  +  C + C +
Sbjct: 18  RANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A Length = 59

 Score = 85.0 bits (211), Expect = 8e-21
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           + +C+     G C + +  +YY+  + +C +F + GCGGN N F T E C+  C G
Sbjct: 4   RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG 59

>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A Length = 59

 Score = 81.2 bits (201), Expect = 2e-19
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           R  LC L    G C  +  A+Y+++   +C+ F + GC GN+NRF T E+C R C
Sbjct: 3   RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57

>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A Length = 59

 Score = 60.7 bits (148), Expect = 3e-12
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
                 +YY++    C+ F + GC GN NRF     C++ C+
Sbjct: 17  YDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58

>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1 Length = 63

 Score = 85.0 bits (211), Expect = 1e-20
 Identities = 29/59 (49%), Positives = 32/59 (54%)

Query: 40 PQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          P     +ICL P   G C   +L +YYD     CRQF YGGC GN NNF T EAC   C
Sbjct: 1  PTGNNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59

>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1 Length = 63

 Score = 81.2 bits (201), Expect = 2e-19
 Identities = 25/60 (41%), Positives = 33/60 (55%)

Query: 493 AARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF 552
               ++C L  + GPC      +Y+DR T  C+ F+YGGCEGNAN F T E C+  C   
Sbjct: 3   GNNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRI 62

>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1 Length = 63

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 19/43 (44%), Positives = 25/43 (58%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           R    ++YYDR T SC+ F YGGC+GN N F    +C   C +
Sbjct: 19  RALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR 61

>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1 Length = 99

 Score = 86.1 bits (213), Expect = 1e-20
 Identities = 22/68 (32%), Positives = 34/68 (50%)

Query: 35  NTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEAC 94
           +TS   +    D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C
Sbjct: 26  DTSNQAKAQRPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDC 85

Query: 95  QARCAGGT 102
              C G  
Sbjct: 86  MRTCGGAI 93

>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1 Length = 99

 Score = 83.4 bits (206), Expect = 1e-19
 Identities = 23/73 (31%), Positives = 35/73 (47%)

Query: 482 TPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNT 541
           TP    + + +A R D C     +GPC  +   ++++     CQ+F+YGGC    N F +
Sbjct: 22  TPGCDTSNQAKAQRPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKS 81

Query: 542 EEQCERLCGEFRA 554
            E C R CG    
Sbjct: 82  AEDCMRTCGGAIG 94

>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1 Length = 99

 Score = 62.2 bits (151), Expect = 3e-12
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPP 476
           +    +++Y+     CQ F YGGC+   N F     C + C   I P
Sbjct: 49  KARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGP 95

>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A Length = 58

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           DIC  P   G C +++L WYYD     C +F+YGGCGGN+N F +++ C+  CA 
Sbjct: 3   DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP 57

>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A Length = 58

 Score = 80.4 bits (199), Expect = 3e-19
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
            D+C L  + G C      WY+D NT  C  F YGGC GN N+F ++++CE++C 
Sbjct: 2   TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA 56

>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A Length = 58

 Score = 60.0 bits (146), Expect = 6e-12
 Identities = 21/41 (51%), Positives = 25/41 (60%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +WYYD +T SC  F YGGC GN N+F  Q  C+K C
Sbjct: 15  RDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55

>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ... Length = 58

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G 
Sbjct: 3   DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58

>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ... Length = 58

 Score = 82.3 bits (204), Expect = 7e-20
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +G C  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ... Length = 58

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +++Y+     CQ F YGGC+   N F     C + C
Sbjct: 15  RARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55

>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1 Length = 60

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 42  FIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           +     C +P  IG C     ++Y+     +C  F + GCGGN N F T   C+ +C G
Sbjct: 1   WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG 59

>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1 Length = 60

 Score = 79.2 bits (196), Expect = 1e-18
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             C      G C +Q +++YF     +C  F++ GC GNANRF T  +C + C
Sbjct: 5   WYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57

>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1 Length = 60

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           +  +  +Y+      C PF + GC GN NRF     C+K+C+
Sbjct: 17  KKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58

>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} PDB: 3ofw_A 1shp_A Length = 61

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 25/57 (43%), Positives = 31/57 (54%)

Query: 44  AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
              IC +P  +G C  Y   +Y+DS   +C  F YGGCGGN NNF T   C+A C  
Sbjct: 3   EASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA 59

>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} PDB: 3ofw_A 1shp_A Length = 61

 Score = 80.8 bits (200), Expect = 3e-19
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 494 ARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           A   +C    + G C      +YFD  T +C  FIYGGC GN N F T  QC  +C 
Sbjct: 2   AEASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 58

>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} PDB: 3ofw_A 1shp_A Length = 61

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           +G + ++Y+D +T  C PF YGGC GN N F     C+  C  
Sbjct: 17  KGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA 59

>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A Length = 70

 Score = 84.3 bits (209), Expect = 2e-20
 Identities = 24/56 (42%), Positives = 30/56 (53%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
            D C+ PAV G C  +   W Y  L  +C  F YGGC GN NNF + E+C+  C  
Sbjct: 7   TDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPV 62

>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A Length = 70

 Score = 81.6 bits (202), Expect = 2e-19
 Identities = 25/59 (42%), Positives = 31/59 (52%)

Query: 492 EAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           EA   D C L +  GPC   E  W +     +C  F+YGGCEGN N F++ E CE  C 
Sbjct: 3   EAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACP 61

>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A Length = 70

 Score = 60.1 bits (146), Expect = 7e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           RG   +W Y      C PF YGGC+GN N F+ + SC+  C 
Sbjct: 20  RGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACP 61

>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A Length = 58

 Score = 83.4 bits (207), Expect = 3e-20
 Identities = 15/56 (26%), Positives = 25/56 (44%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
              CL+P   G     ++ ++Y++     + F YGG    +NNF +     A CA 
Sbjct: 2   PAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAA 57

>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A Length = 58

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R   C     +GP   +   ++++      Q+F+YGG     N F +       C 
Sbjct: 1   RPAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACA 56

>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A Length = 58

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           +    +++Y+    + Q F YGG +   N F         C
Sbjct: 15  KARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAAC 55

>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} Length = 75

 Score = 83.9 bits (208), Expect = 3e-20
 Identities = 25/70 (35%), Positives = 33/70 (47%)

Query: 31  YYDSNTSCFPQFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMT 90
           +   +         +D CL    +G C      WYYD  E  C+ F YGGC GN+NN++ 
Sbjct: 5   HQHQHQHQHQMHQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLR 64

Query: 91  EEACQARCAG 100
           EE C   C G
Sbjct: 65  EEECILACRG 74

>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} Length = 75

 Score = 80.1 bits (198), Expect = 8e-19
 Identities = 23/69 (33%), Positives = 30/69 (43%)

Query: 481 QTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFN 540
           Q         Q     D C   ++ G C      WY+D     C+SF+YGGC GN N + 
Sbjct: 4   QHQHQHQHQHQMHQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYL 63

Query: 541 TEEQCERLC 549
            EE+C   C
Sbjct: 64  REEECILAC 72

>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} Length = 75

 Score = 60.5 bits (147), Expect = 6e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           RG++ +WYYD     C+ F YGGC GN N +  +  C   C
Sbjct: 32  RGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 72

>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C Length = 66

 Score = 83.9 bits (208), Expect = 3e-20
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT 102
            D C      G C  Y+  ++Y++   +C +F YGGC GN NNF T E C+  C  G 
Sbjct: 4   PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGH 61

>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C Length = 66

 Score = 82.7 bits (205), Expect = 7e-20
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR 553
           + D CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C +  
Sbjct: 3   KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGH 61

>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C Length = 66

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           RG   +++Y+  T  C+ F+YGGC GN N F     C+  C  
Sbjct: 17  RGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 59

>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1 Length = 61

 Score = 83.5 bits (207), Expect = 4e-20
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR 553
           R+  C    ++  C     A+Y+  +  RC  F YGGC GN N F ++  C   C E+R
Sbjct: 3   RHPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEYR 61

>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1 Length = 61

 Score = 80.0 bits (198), Expect = 6e-19
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
             C +P     C   V  +YY     RC QF YGGC GN N+F ++  C+  C 
Sbjct: 4  HPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58

>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1 Length = 61

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           +     +YY      C  F+YGGC GN N F     C+  C++
Sbjct: 17  QTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLE 59

>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A Length = 60

 Score = 83.1 bits (206), Expect = 4e-20
 Identities = 20/54 (37%), Positives = 25/54 (46%)

Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
            +C  PA  G         YY+S   +C +F Y G GGN+NNF     CQ  C
Sbjct: 4  PSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57

>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A Length = 60

 Score = 80.4 bits (199), Expect = 4e-19
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           R  LC L ++SG  T+ E   Y++    +C  F Y G  GN N F     C+R C
Sbjct: 3   RPSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57

>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A Length = 60

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
               ++ YY+     C  F Y G  GN N F   + CQ+ C+
Sbjct: 17  TKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCL 58

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 87.5 bits (217), Expect = 5e-20
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 336 IPSPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
           +P  P     +   TV+A      T  C    YP P  +W++ ++ I   D  Y +  +G
Sbjct: 4   LPKAPVIT--TPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG 61

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            +L I+ +   D GIY C A NG+G  +     + V
Sbjct: 62  QLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQV 97

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 80.9 bits (200), Expect = 8e-18
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG 386
             +     +   P+      P  V+  EG    L C  +G P P  +W KG+ ++   + 
Sbjct: 89  VESCGALQVKMKPKI--TRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALR-ENS 145

Query: 387 HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
              +   G L+I  + ++DAG Y CVA N +G    K   + V 
Sbjct: 146 RIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 10/69 (14%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C A    G  V S          + V   P+      P  V+  EG    L C  +G P 
Sbjct: 79  CTANNGVGGAVESCG-------ALQVKMKPKI--TRPPINVKIIEGLKAVLPCTTMGNPK 129

Query: 153 PVYTWSKGE 161
           P  +W KG+
Sbjct: 130 PSVSWIKGD 138

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 119 VASPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           +   P     +   TV+A      T  C    YP P  +W++
Sbjct: 4   LPKAPVIT--TPLETVDALVEEVATFMCAVESYPQPEISWTR 43

>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I Length = 65

 Score = 83.1 bits (206), Expect = 5e-20
 Identities = 15/58 (25%), Positives = 25/58 (43%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT 102
              CL+P   G     ++ ++Y++     + F YGG    +NNF +     A CA   
Sbjct: 2   PAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAAG 59

>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I Length = 65

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 13/63 (20%), Positives = 22/63 (34%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRA 554
           R   C     +GP   +   ++++      Q+F+YGG     N F +       C     
Sbjct: 1   RPAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAAGG 60

Query: 555 EDP 557
             P
Sbjct: 61  PPP 63

>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I Length = 65

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 12/50 (24%), Positives = 19/50 (38%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDP 479
           +    +++Y+    + Q F YGG +   N F         C     PP P
Sbjct: 15  KARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAAGGPPPP 64

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 84.4 bits (209), Expect = 7e-20
 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 333 TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL 392
           +     PP                   L C+A G P+P   W K  V +   D   K   
Sbjct: 2   SSGSSGPPVIRQGPV-NQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE 60

Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIG 418
           +GVLQI      D G Y C+A+   G
Sbjct: 61  NGVLQIRYAKLGDTGRYTCIASTPSG 86

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 1/40 (2%)

Query: 120 ASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           + PP                   L C+A G P+P   W K
Sbjct: 6   SGPPVIRQGPV-NQTVAVDGTFVLSCVATGSPVPTILWRK 44

>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 71

 Score = 82.8 bits (205), Expect = 7e-20
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
            D C      G C  Y+  ++Y++   +C +F YGGC GN NNF T E C+  C  G
Sbjct: 11  PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG 67

>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 71

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 491 QEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
            +  + D CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C 
Sbjct: 6   DDKLKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 65

Query: 551 E 551
           +
Sbjct: 66  D 66

>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1 Length = 71

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           RG   +++Y+  T  C+ F+YGGC GN N F     C+  C  
Sbjct: 24  RGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 66

>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1 Length = 65

 Score = 82.4 bits (204), Expect = 8e-20
 Identities = 23/56 (41%), Positives = 30/56 (53%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
             C      G C   +  +YY+S   +C++F YGGCGGN NNF T + CQ  CA  
Sbjct: 5   TFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAK 60

>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1 Length = 65

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R   C L  E+G C     A+Y++ + ++CQ F YGGC GNAN F T ++C+R C 
Sbjct: 3   RPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCA 58

>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1 Length = 65

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 16/47 (34%), Positives = 19/47 (40%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPP 476
                 +YY+     CQ F YGGC GN N F     CQ+ C      
Sbjct: 17  NALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKYGR 63

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 86.5 bits (214), Expect = 1e-19
 Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G YSC  S+       T +V   +      P     P P          V A  G 
Sbjct: 75  ASDKGNYSCFVSSPS----ITKSVFSKFIPLIPIPERTTKPYPADI-VVQFKDVYALMGQ 129

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
            VTL C A+G P+P   W K    +         T   VL+I  +  +D GIY C A N 
Sbjct: 130 NVTLECFALGNPVPDIRWRKVLEPM--PSTAEISTSGAVLKIFNIQLEDEGIYECEAENI 187

Query: 417 IGDPIRKEFNVIVRG 431
            G   + +  + V+ 
Sbjct: 188 RGK-DKHQARIYVQA 201

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 61.1 bits (148), Expect = 6e-11
 Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIP--VYTWSKGE--VSIDGSDGHYKLTLDGVLQIVGLVR 403
           P V  +EG  + L C    +      Y W   E  V I      +    +G L I  +  
Sbjct: 16  PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEA 75

Query: 404 QDAGIYVCVAANGIGDPIRKEFNVIVR 430
            D G Y C  ++           + + 
Sbjct: 76  SDKGNYSCFVSSPSITKSVFSKFIPLI 102

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 5/69 (7%)

Query: 94  CQARCAGGTFVTSSAAPDQL---ENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 150
           C       T  +  +    L     R     P          V A  G  VTL C A+G 
Sbjct: 83  CFVSSPSIT-KSVFSKFIPLIPIPERTTKPYPADI-VVQFKDVYALMGQNVTLECFALGN 140

Query: 151 PIPVYTWSK 159
           P+P   W K
Sbjct: 141 PVPDIRWRK 149

>2kcr_A Anntoxin; protein; NMR {Hyla annectans} Length = 61

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 19/57 (33%), Positives = 24/57 (42%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
              C      G  +     +YYD   + C+ F Y G GGN N F T E C+A C   
Sbjct: 4   DYRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCVTA 60

>2kcr_A Anntoxin; protein; NMR {Hyla annectans} Length = 61

 Score = 80.1 bits (198), Expect = 5e-19
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 494 ARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           A++  C L    G  +     +Y+D+ T  C++F Y G  GN NRF T E CE  C
Sbjct: 2   AQDYRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATC 57

>2kcr_A Anntoxin; protein; NMR {Hyla annectans} Length = 61

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
            G++  +YYD+ T SC+ F+Y G  GN NRF     C+  CV
Sbjct: 17  SGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCV 58

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 100

 Score = 82.8 bits (205), Expect = 1e-19
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 333 TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL 392
           +     PP                   L+C A G P+PV +W K   +  G D    +  
Sbjct: 2   SSGSSGPPIILQGPA-NQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE 60

Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIG 418
            G LQI  L   D G Y CVA +  G
Sbjct: 61  QGTLQIKNLRISDTGTYTCVATSSSG 86

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 100

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 118 AVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
             + PP                   L+C A G P+PV +W K
Sbjct: 4   GSSGPPIILQGPA-NQTLAVDGTALLKCKATGDPLPVISWLK 44

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 83.7 bits (207), Expect = 8e-19
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 7/99 (7%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--- 393
           +  +      P  +   +G  V L C   G   P   W K    +   D  Y    +   
Sbjct: 1   AGLKL--MGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHW 58

Query: 394 -GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            G L +  + R DAG Y C   +G    I +   + V G
Sbjct: 59  IGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEG 97

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 66.7 bits (163), Expect = 5e-13
 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 11/95 (11%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGV 395
             P F    EP  +         L C A+G P PV   W +G   I G           V
Sbjct: 97  GVPFFT--VEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPS-----PSV 149

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           L + G+    + ++ C A N  G    +   V ++
Sbjct: 150 LNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           CQ    G T ++           + V   P F    EP  +         L C A+G P 
Sbjct: 77  CQVEDGGETEISQPV-------WLTVEGVPFFT--VEPKDLAVPPNAPFQLSCEAVGPPE 127

Query: 153 PV-YTWSKG 160
           PV   W +G
Sbjct: 128 PVTIVWWRG 136

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 9/40 (22%), Positives = 13/40 (32%), Gaps = 3/40 (7%)

Query: 121 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           +  +      P  +   +G  V L C   G   P   W K
Sbjct: 1   AGLKL--MGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVK 38

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 83.7 bits (207), Expect = 2e-18
 Identities = 38/140 (27%), Positives = 51/140 (36%), Gaps = 16/140 (11%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
           P D   Y C  SN     + +T ++    V             P      +  V  E   
Sbjct: 73  PRDEAIYECVASNNVGEISVSTRLT----VLREDQIPR---GFPTIDMGPQLKV-VERTR 124

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVC 411
             T+ C A G P P  TW K  + +D S+ + ++        G LQI      D G Y C
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC 184

Query: 412 VAANGIGDPIRKEFNVIVRG 431
           VA N  G       N+ VRG
Sbjct: 185 VATNSAGTRYSAPANLYVRG 204

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 69.8 bits (171), Expect = 9e-14
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
           +PPRF     P       G   +  C A G P P   W+K    +           DG  
Sbjct: 5   TPPRFT--RTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSG 62

Query: 395 -VLQIVGL-VRQDAGIYVCVAANGIG 418
            VL+I  L   +D  IY CVA+N +G
Sbjct: 63  SVLRIQPLRTPRDEAIYECVASNNVG 88

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 17/69 (24%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A    G  ++ S     L         P      +  V  E     T+ C A G P P
Sbjct: 81  CVASNNVGE-ISVSTRLTVLREDQIPRGFPTIDMGPQLKV-VERTRTATMLCAASGNPDP 138

Query: 154 VYTWSKGEV 162
             TW K  +
Sbjct: 139 EITWFKDFL 147

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 119 VASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK 159
             +PPRF     P       G   +  C A G P P   W+K
Sbjct: 3   GETPPRFT--RTPVDQTGVSGGVASFICQATGDPRPKIVWNK 42

>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena} Length = 55

 Score = 78.4 bits (194), Expect = 2e-18
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
           D C  P+  G C      WY++     C +F YGGCGGN N F T+EAC  RCA  
Sbjct: 2   DTCRLPSDRGRCKASFERWYFNG--RTCAKFIYGGCGGNGNKFPTQEACMKRCAKA 55

>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena} Length = 55

 Score = 75.7 bits (187), Expect = 2e-17
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
           D C L S+ G C      WYF+  T  C  FIYGGC GN N+F T+E C + C +
Sbjct: 2   DTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCAK 54

>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena} Length = 55

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           + ++E+WY++    +C  F YGGC GN N+F  Q +C KRC +
Sbjct: 14  KASFERWYFN--GRTCAKFIYGGCGGNGNKFPTQEACMKRCAK 54

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 81.4 bits (201), Expect = 8e-18
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 338 SPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGV 395
            PP      +P       G   +  C A G P P   W K    + G+   Y +    G 
Sbjct: 5   HPPEII--RKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG 62

Query: 396 LQIVGL----VRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           + I+ +      +D   Y CVA NG+GD +  +  + +
Sbjct: 63  ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTI 100

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 81.0 bits (200), Expect = 1e-17
 Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 330 TPYTPNIPSPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY 388
                     P       P T   E G+ V + C AIG P P   W K +  +D S+  Y
Sbjct: 101 YEGDKTPAGFPVIT--QGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY 158

Query: 389 KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            L  DG LQI     +D G Y CVA N +G    K  N+ V+
Sbjct: 159 SLK-DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPI 152
           C A    G  V++ A     E     A  P       P T   E G+ V + C AIG P 
Sbjct: 82  CVAENGVGDAVSADATLTIYEGDKTPAGFPVIT--QGPGTRVIEVGHTVLMTCKAIGNPT 139

Query: 153 PVYTWSKGEV 162
           P   W K + 
Sbjct: 140 PNIYWIKNQT 149

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 3/42 (7%)

Query: 119 VASPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            A PP      +P       G   +  C A G P P   W K
Sbjct: 3   GAHPPEII--RKPQNQGVRVGGVASFYCAARGDPPPSIVWRK 42

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 84.6 bits (209), Expect = 1e-17
 Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 11/138 (7%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D   Y C   N          V   Y +   T         P     S+  + A+ G+
Sbjct: 173 VSDIYKYVCTAKNAA---VDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMM-AKAGD 228

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIVGLVRQDAGIYVCV 412
              + C+    P+    + K    ++G+       +  T    L     + +D G+Y C 
Sbjct: 229 VTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE 288

Query: 413 AANGIGDPIRKEFNVIVR 430
             NG+G P +    + V 
Sbjct: 289 VDNGVGKPQKHSLKLTVV 306

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 76.9 bits (189), Expect = 3e-15
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
            + S P++    E  +  ++G  VT+ C   G P P   WS     +  S G   +T D 
Sbjct: 304 TVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL--SGGRATVT-DS 360

Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
            L I G+   D G Y C A N  G
Sbjct: 361 GLVIKGVKNGDKGYYGCRATNEHG 384

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 71.5 bits (175), Expect = 2e-13
 Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 5/97 (5%)

Query: 336 IPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTL- 392
           +   P      +P  V   E N   L CI  G    V Y+W K   S +  + +  L   
Sbjct: 3   VDKYPVLK--DQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKD 60

Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +G L  +     D G Y C A    G    +  +   
Sbjct: 61  EGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRK 97

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 67.2 bits (164), Expect = 4e-12
 Identities = 28/145 (19%), Positives = 41/145 (28%), Gaps = 29/145 (20%)

Query: 300 PNDCG-YSC--SNLF-DITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEG 355
            +D G Y C         ++   +    Y            P+               EG
Sbjct: 71  ASDEGHYQCFAETPAGVASSRVISFRKTYL--------IASPAKTH-------EKTPIEG 115

Query: 356 NFVTLRC-IAIGYPIPVYTWSKGEVSIDGS------DGHYKLTLDGVLQIVGLVRQDA-- 406
               L C +   YP P+ TW K     D +      D       DG L    + ++D   
Sbjct: 116 RPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSD 175

Query: 407 -GIYVCVAANGIGDPIRKEFNVIVR 430
              YVC A N   D         ++
Sbjct: 176 IYKYVCTAKNAAVDEEVVLVEYEIK 200

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 47.6 bits (113), Expect = 7e-06
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 7/66 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+     G     S        ++ V S P++    E  +  ++G  VT+ C   G P P
Sbjct: 287 CEVDNGVGKPQKHSL-------KLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAP 339

Query: 154 VYTWSK 159
              WS 
Sbjct: 340 NVVWSH 345

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 94  CQAR-CAGGTFVTSSAAPDQL--ENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 150
           C A+  A    V       +   ++       P     S+  + A+ G+   + C+    
Sbjct: 181 CTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMM-AKAGDVTMIYCMYGSN 239

Query: 151 PIPVYTWSK 159
           P+    + K
Sbjct: 240 PMGYPNYFK 248

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 79.5 bits (196), Expect = 2e-17
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLD 393
            I     F N   P  E +EG    + C  +    P   W   G   I   D  + +  +
Sbjct: 96  KIFQKLMFKNAPTPQ-EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN 154

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIG-DPIRKEFNVIV 429
             LQI G+ + D G Y C        +   K+  VIV
Sbjct: 155 NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 191

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 69.1 bits (169), Expect = 1e-13
 Identities = 18/98 (18%), Positives = 25/98 (25%), Gaps = 9/98 (9%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYP-IPVYTWSK-GEVSIDGSDGHYKLTL--- 392
             +      P+  E   G      C   G       +W       +  +     +     
Sbjct: 2   VLQVD--IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD 59

Query: 393 -DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
               L I      DAGIY CV     G       NV +
Sbjct: 60  DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 97

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 46.0 bits (109), Expect = 9e-06
 Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 8/66 (12%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C      GT   ++         + +     F N   P  E +EG    + C  +    P
Sbjct: 79  CVVTAEDGTQSEATV-------NVKIFQKLMFKNAPTPQ-EFKEGEDAVIVCDVVSSLPP 130

Query: 154 VYTWSK 159
              W  
Sbjct: 131 TIIWKH 136

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 83.0 bits (205), Expect = 3e-17
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS--D 385
            S      +  P RF + +E  + A  G+ V L+C  IG P+P   W K +  ++    D
Sbjct: 110 ISRTAKVMVAGPLRFLSQTES-ITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGD 168

Query: 386 GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
               +   G LQI  L   D+G+Y C A N        E  V + 
Sbjct: 169 SRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL 213

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 79.5 bits (196), Expect = 4e-16
 Identities = 31/120 (25%), Positives = 37/120 (30%), Gaps = 7/120 (5%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
           P D G Y C           +              P +     F       V A EG   
Sbjct: 186 PGDSGVYRC-----SARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPS-NVIAIEGKDA 239

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
            L C   GYP P +TW +GE  I      Y L     L I  +   D+G Y CV      
Sbjct: 240 VLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNE 299

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 74.9 bits (184), Expect = 2e-14
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
            PP F N   P+ + A E   +   C   G P+P   W K    +     ++++     L
Sbjct: 311 VPPWFLN--HPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVI-PSDYFQIVGGSNL 367

Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
           +I+G+V+ D G Y CVA N  G
Sbjct: 368 RILGVVKSDEGFYQCVAENEAG 389

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 328 TSTPYTPNIPSPPRFHNYSEP-TVEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSID-GS 384
           +   +         F   SEP       G  V L C A     +PV  W K  + +  G 
Sbjct: 10  SHHHHHHGGRRSLHFV--SEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGM 67

Query: 385 DGHYKLTLDGVLQIVGLV-----RQDAGIYVCVAANGI-GDPIRKEFNVIVRG 431
           D   +   +G L I  ++     + D G+Y C A+ G  G  I +   V+V G
Sbjct: 68  DDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAG 120

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A       + S  A      ++ VA P RF + +E  + A  G+ V L+C  IG P+P
Sbjct: 99  CEASLGDSGSIISRTA------KVMVAGPLRFLSQTES-ITAFMGDTVLLKCEVIGDPMP 151

Query: 154 VYTWSKGEV 162
              W K + 
Sbjct: 152 TIHWQKNQQ 160

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 42.1 bits (99), Expect = 4e-04
 Identities = 14/57 (24%), Positives = 16/57 (28%), Gaps = 4/57 (7%)

Query: 105 TSSAAPDQLENRIAVASPPRFHNYSEP-TVEAEEGNFVTLRCIAIG-YPIPVYTWSK 159
            S        +         F   SEP       G  V L C A     +PV  W K
Sbjct: 4   GSELESSHHHHHHGGRRSLHFV--SEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKK 58

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 41.4 bits (97), Expect = 7e-04
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C AR    T  T + A  ++ +   +     F       V A EG    L C   GYP P
Sbjct: 194 CSARNPAST-RTGNEAEVRILSDPGLHRQLYFLQRPS-NVIAIEGKDAVLECCVSGYPPP 251

Query: 154 VYTWSKGEVSRKFFLRGFISAND 176
            +TW +GE   +   + +     
Sbjct: 252 SFTWLRGEEVIQLRSKKYSLLGG 274

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 81.5 bits (201), Expect = 3e-17
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDG 394
           I     F N   P  E +EG    + C  +    P   W   G   I   D  + +  + 
Sbjct: 97  IFQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN 155

Query: 395 VLQIVGLVRQDAGIYVCVAANGIG-DPIRKEFNVIVR 430
            LQI G+ + D G Y C        +   K+  VIV 
Sbjct: 156 YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 72.6 bits (178), Expect = 4e-14
 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLD 393
           PP            A  G  VTL C A G+P P  +W+K    I+  +     H      
Sbjct: 194 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 253

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRK-EFNVIVR 430
             L I  + + D   YVC+A N  G+        V  +
Sbjct: 254 SELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 62.2 bits (151), Expect = 9e-11
 Identities = 18/97 (18%), Positives = 25/97 (25%), Gaps = 9/97 (9%)

Query: 340 PRFHNYSEP-TVEAEEGNFVTLRCIAIGYP-IPVYTWSK-GEVSIDGSDGHYKLTLD--- 393
            +      P   E   G      C   G       +W       +  +     +  +   
Sbjct: 3   LQVD--IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60

Query: 394 -GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
              L I      DAGIY CV     G       NV +
Sbjct: 61  SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 97

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 8/66 (12%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C      GT   ++         + +     F N   P  E +EG    + C  +    P
Sbjct: 79  CVVTAEDGTQSEATV-------NVKIFQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPP 130

Query: 154 VYTWSK 159
              W  
Sbjct: 131 TIIWKH 136

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C+ R      +           ++ V  PP            A  G  VTL C A G+P 
Sbjct: 172 CEGRILARGEINFKDI------QVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPE 225

Query: 153 PVYTWSK 159
           P  +W+K
Sbjct: 226 PTMSWTK 232

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 82.2 bits (203), Expect = 6e-17
 Identities = 35/134 (26%), Positives = 50/134 (37%), Gaps = 11/134 (8%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G YSC  ++  D  T +     +     S          P           A  G 
Sbjct: 167 ASDLGNYSCFATSHIDFITKSVFSKFSQ---LSLAAEDARQYAPSIKAKFPADTYALTGQ 223

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
            VTL C A G P+P   W K    +DGS     L+ + +L I  +  +D G Y C A N 
Sbjct: 224 MVTLECFAFGNPVPQIKWRK----LDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENI 279

Query: 417 IGDPIRKEFNVIVR 430
            G     +  +I+ 
Sbjct: 280 KGR-DTYQGRIIIH 292

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 72.6 bits (178), Expect = 7e-14
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%)

Query: 335 NIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
            I + P +      T  EA+ G+ +   C+A G P P   W +    +  S    +++  
Sbjct: 290 IIHAQPDWL--DVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLA-SQNRIEVS-G 345

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           G L+   LV +D+G+Y CVA N  G  +     + V+ 
Sbjct: 346 GELRFSKLVLEDSGMYQCVAENKHGT-VYASAELTVQA 382

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 23/101 (22%), Positives = 28/101 (27%), Gaps = 3/101 (2%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGE--VSIDGS 384
            S   +        F       V+  EG  V   C     YP   Y W   E    I   
Sbjct: 89  VSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPAD 148

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF 425
              +     G L I      D G Y C A + I    +  F
Sbjct: 149 GRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVF 189

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 67.6 bits (165), Expect = 3e-12
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 7/96 (7%)

Query: 339 PPRFHNYSEPT----VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
            P F    +P      E      VTL C A   P   Y W      +          + G
Sbjct: 4   GPVFE--EQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG 61

Query: 395 VLQIVGLVR-QDAGIYVCVAANGIGDPIRKEFNVIV 429
            L I   V+ +DAG Y CVA N  G  + +E ++  
Sbjct: 62  DLVISNPVKAKDAGSYQCVATNARGTVVSREASLRF 97

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 94  CQARCAGGTF---VTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 150
           C A          V S  +   L    A    P           A  G  VTL C A G 
Sbjct: 175 CFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGN 234

Query: 151 PIPVYTWSK--GEVSRKFFLRG 170
           P+P   W K  G  + K+    
Sbjct: 235 PVPQIKWRKLDGSQTSKWLSSE 256

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 44.5 bits (105), Expect = 7e-05
 Identities = 18/70 (25%), Positives = 21/70 (30%), Gaps = 8/70 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPI 152
           C A  A GT V+  A        +       F       V+  EG  V   C     YP 
Sbjct: 79  CVATNARGTVVSREA-------SLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPA 131

Query: 153 PVYTWSKGEV 162
             Y W   E 
Sbjct: 132 LSYRWLLNEF 141

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 11/67 (16%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C+A    G   T          RI + + P +      T  EA+ G+ +   C+A G P 
Sbjct: 274 CEAENIKGR-DTYQG-------RIIIHAQPDWL--DVITDTEADIGSDLRWSCVASGKPR 323

Query: 153 PVYTWSK 159
           P   W +
Sbjct: 324 PAVRWLR 330

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           PP      +     AE G  +T  C A G P P  +W +    I+ ++ +     +  L 
Sbjct: 96  PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 155

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +  ++  D G YVC A N  G+   K+  + V
Sbjct: 156 VRNIINSDGGPYVCRATNKAGE-DEKQAFLQV 186

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 76.0 bits (187), Expect = 4e-16
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVL 396
           S   F     P  E ++G    + C     P P  +W    E     SD  + +  +  L
Sbjct: 1   SMLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 59

Query: 397 QIVGLVRQDAGIYVCVAAN-GIGDPIRKEFNVIVR 430
           QI+ + + D GIY C       G+   ++  VIV 
Sbjct: 60  QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN 94

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 7/68 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C+ R      +            + V  PP      +     AE G  +T  C A G P 
Sbjct: 74  CEGRVEARGEIDFRDI------IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPE 127

Query: 153 PVYTWSKG 160
           P  +W + 
Sbjct: 128 PAISWFRN 135

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 1/39 (2%)

Query: 121 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           S   F     P  E ++G    + C     P P  +W  
Sbjct: 1   SMLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLY 38

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 78.7 bits (194), Expect = 7e-17
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
               F       +    G    + C    G+P P  +W K    +D  D    +   G L
Sbjct: 110 LRDDFRQNPSDVM-VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR-GGKL 167

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            I    + DAG YVCV  N +G+   +   + V 
Sbjct: 168 MITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI----DGSDGHYKLTL 392
            PPR      P+ +   +G   TL C A G P P   W KG   +    D    H  L  
Sbjct: 8   FPPRI--VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65

Query: 393 DGVLQIVGLV-----RQDAGIYVCVAANGIGDPIRKEFNVIV 429
            G L  + +V     R D G+YVCVA N +G+ +  + ++ V
Sbjct: 66  SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEV 107

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 119 VASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSRKFFLRGF 171
              PPR      P+ +   +G   TL C A G P P   W KG      +       R  
Sbjct: 6   EDFPPRI--VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML 63

Query: 172 ISANDLCFLESESGPCTQQEAAWY 195
           + +  L FL    G  ++ +   Y
Sbjct: 64  LPSGSLFFLRIVHGRKSRPDEGVY 87

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 78.8 bits (194), Expect = 7e-17
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
           +P   +    +  +     G FV L C A G+P   Y W K    I   +          
Sbjct: 15  VPRGSKI-TVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT-------SE 66

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           L    +  +DAG YVC   N       +   + V
Sbjct: 67  LIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDV 100

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 75.7 bits (186), Expect = 9e-16
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 15/137 (10%)

Query: 300 PNDCG-YSC--SNLF-DITTTTTTVS-PAYPVYTSTPYTPNIPSPPRFHNYSEPT-VEAE 353
             D G Y C  +N F    +  + +     P            S  +     EPT  +  
Sbjct: 74  VKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQI--CVEPTSQKLM 131

Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
            G+ + L+C+A+G PIP Y W K E+ +             +  +  +  +  G Y C  
Sbjct: 132 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK-------LYMVPYVDLEHQGTYWCHV 184

Query: 414 ANGIGDPIRKEFNVIVR 430
            N       K+  +I+ 
Sbjct: 185 YNDRDSQDSKKVEIIID 201

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 94  CQARCAGGTFVTSSA------APDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCI 146
           C+         +  +       P+  +  +   S  +     EPT  +   G+ + L+C+
Sbjct: 82  CRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCV 141

Query: 147 AIGYPIPVYTWSKGEV 162
           A+G PIP Y W K E+
Sbjct: 142 AVGSPIPHYQWFKNEL 157

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 106 SSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            S+      +   V    +    +  +     G FV L C A G+P   Y W K
Sbjct: 2   GSSHHHHHHSSGLVPRGSKI-TVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK 54

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 80.6 bits (199), Expect = 2e-16
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 11/134 (8%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
            +D G Y+C     +T       P   +  +          P+       TV AE+G  V
Sbjct: 166 KSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE--YEPKIEVQFPETVPAEKGTTV 223

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDG---SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
            L C A+G P+P   W +     DG   +    +   +G+L+I    ++DAG Y CVA N
Sbjct: 224 KLECFALGNPVPTILWRRA----DGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAEN 279

Query: 416 GIGDPIRKEFNVIV 429
             G     +  +  
Sbjct: 280 SRGK-NVAKGQLTF 292

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 76.8 bits (189), Expect = 3e-15
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 1/95 (1%)

Query: 329 STPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGH 387
           S            F   +  TV    G  + L C          Y W   E      +  
Sbjct: 91  SREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRR 150

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR 422
           +     G L I  + + D G Y CV  N + +   
Sbjct: 151 FVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKV 185

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 72.2 bits (177), Expect = 1e-13
 Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 338 SPPRFHNYSEPTV--EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
           S P F       +     E   V L C   G P P   W      +D         +DG 
Sbjct: 4   SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGS 63

Query: 396 LQIVGLVR-QDAGIYVCVAANGIGDPIRKEFNVIV 429
           L I    + QDAG Y C+A N  G  + +E  +  
Sbjct: 64  LLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQF 98

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           + P +               V   C A G P P Y W K    +  +    ++   G L 
Sbjct: 294 AQPNWVQIINDIH-VAMEESVFWECKANGRPKPTYRWLKNGDPLL-TRDRIQIE-QGTLN 350

Query: 398 IVGLVRQDAGIYVCVAANGIGD 419
           I  +   DAG+Y CVA N  G 
Sbjct: 351 ITIVNLSDAGMYQCVAENKHGV 372

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 94  CQAR-CAGGTFVTSSAAPDQL-ENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYP 151
           C          V     P  L  + +     P+       TV AE+G  V L C A+G P
Sbjct: 174 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 233

Query: 152 IPVYTWSK 159
           +P   W +
Sbjct: 234 VPTILWRR 241

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 8/70 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPI 152
           C A  + GT V+  A       ++  A    F   +  TV    G  + L C        
Sbjct: 80  CIATNSFGTIVSREA-------KLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGE 132

Query: 153 PVYTWSKGEV 162
             Y W   E 
Sbjct: 133 LSYAWIFNEY 142

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 12/42 (28%), Gaps = 2/42 (4%)

Query: 120 ASPPRFHNYSEPTV--EAEEGNFVTLRCIAIGYPIPVYTWSK 159
            S P F       +     E   V L C   G P P   W  
Sbjct: 3   GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKL 44

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens} Length = 212

 Score = 77.6 bits (191), Expect = 2e-16
 Identities = 33/144 (22%), Positives = 46/144 (31%), Gaps = 17/144 (11%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVS-------PAYPVYTSTPYTPNIPSPPRFHNYSEPT 349
           PND G Y     +       T  +S        A                       +  
Sbjct: 68  PNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDV- 126

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQD 405
           V  +EG  + L C   G P P  +W K E ++  +D H  L  +        I G+   D
Sbjct: 127 VTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD-HCNLKFEAGRTAYFTINGVSTAD 185

Query: 406 AGIYVCVAANGIGDPIRKEFNVIV 429
           +G Y  V  N  G     +F V V
Sbjct: 186 SGKYGLVVKNKYGS-ETSDFTVSV 208

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens} Length = 212

 Score = 52.2 bits (125), Expect = 8e-08
 Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 5/77 (6%)

Query: 346 SEPTVEAEEGNFVTLRC-IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGL 401
           +           + L   +          WS    +I  SD   K  + G    LQI   
Sbjct: 8   ATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD-RVKTGVTGEQIWLQINEP 66

Query: 402 VRQDAGIYVCVAANGIG 418
              D G YV    +G  
Sbjct: 67  TPNDKGKYVMELFDGKT 83

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens} Length = 212

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 87  NFMTEEACQARCAGGTFVTSSAAPDQLENR-IAVASPPRFHNYSEPTVEAEEGNFVTLRC 145
           +  T        +G  +  + A   +L+   IA  +  R        V  +EG  + L C
Sbjct: 80  DGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 139

Query: 146 IAIGYPIPVYTWSKGEV 162
              G P P  +W K E 
Sbjct: 140 NVWGDPPPEVSWLKNEK 156

>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 74.7 bits (184), Expect = 2e-16
 Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 5/109 (4%)

Query: 325 PVYTSTPYTP-NIPSPPRFH--NYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI 381
               + P T   I  PP+     +   T   + G  + L     G P P   W+KG   +
Sbjct: 6   SGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPL 65

Query: 382 DGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           D S  H + +  D V  +    R D+G Y                 + V
Sbjct: 66  DTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMK-DTATIRIRV 113

>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 119 VASPPRFH--NYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           +A PP+     +   T   + G  + L     G P P   W+KG
Sbjct: 18  IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG 61

>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4 Length = 98

 Score = 74.1 bits (182), Expect = 2e-16
 Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 6/100 (6%)

Query: 333 TPNIPS-PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKL 390
               PS P       + +     G  VT  C A    P     W++       S      
Sbjct: 2   PLAAPSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDF- 60

Query: 391 TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             +G+L I  +   DAG YVC  +N      +    + V+
Sbjct: 61  --NGILTIRNVQPSDAGTYVCTGSNMFA-MDQGTATLHVQ 97

>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4 Length = 98

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 9/45 (20%), Positives = 14/45 (31%), Gaps = 1/45 (2%)

Query: 118 AVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGE 161
           A + P       + +     G  VT  C A    P     W++  
Sbjct: 5   APSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLH 49

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 79.1 bits (195), Expect = 3e-16
 Identities = 38/136 (27%), Positives = 46/136 (33%), Gaps = 13/136 (9%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
           P D   Y C   N     T    ++    V             P      +  V  E   
Sbjct: 73  PRDENVYECVAQNSVGEITVHAKLT----VLREDQL---PSGFPNIDMGPQLKV-VERTR 124

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGS--DGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
             T+ C A G P P  TW K  + +D S  +G  K    G LQI      D G Y CVA 
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVAT 184

Query: 415 NGIGDPIRKEFNVIVR 430
           N  G       N+ VR
Sbjct: 185 NSAGVRYSSPANLYVR 200

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 69.1 bits (169), Expect = 5e-13
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 338 SPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--- 393
            PPRF    EP       G   +  C A G P P  TW+K    ++          +   
Sbjct: 5   EPPRF--IKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAG 62

Query: 394 GVLQIVGL-VRQDAGIYVCVAANGIG 418
            VL+I  L   +D  +Y CVA N +G
Sbjct: 63  AVLRIQPLRTPRDENVYECVAQNSVG 88

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 62.5 bits (152), Expect = 7e-11
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
              PRF      + E   G  V + C+A+G P+P   W +G   +   D        G  
Sbjct: 203 NVAPRFSILPM-SHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDM----PVGRN 257

Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
            +     +D+  Y CVA + +G
Sbjct: 258 VLELTDVKDSANYTCVAMSSLG 279

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 3/42 (7%)

Query: 119 VASPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
              PPRF    EP       G   +  C A G P P  TW+K
Sbjct: 3   GEEPPRF--IKEPKDQIGVSGGVASFVCQATGDPKPRVTWNK 42

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A  + G   +S A    L  R+     PRF      + E   G  V + C+A+G P+P
Sbjct: 181 CVATNSAGVRYSSPA---NLYVRV-QNVAPRFSILPM-SHEIMPGGNVNITCVAVGSPMP 235

Query: 154 VYTWSKG 160
              W +G
Sbjct: 236 YVKWMQG 242

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 79.6 bits (196), Expect = 4e-16
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 8/130 (6%)

Query: 305 YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA 364
           Y C     +T  T   +    +  + P      S PR     +  +E    + ++L C A
Sbjct: 180 YQCRTKHRLTGETRLSATKGRLVITEP---ISSSAPRTPALVQKPLELMVAHTISLLCPA 236

Query: 365 IGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDP 420
            G+P P + W K                   + G L I   V +D+G Y+CV  N +G  
Sbjct: 237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG- 295

Query: 421 IRKEFNVIVR 430
              E  + V 
Sbjct: 296 ESVETVLTVT 305

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 69.2 bits (169), Expect = 9e-13
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQ 397
            P F       ++        + C A G P+P   W +    ++    G  +++ DG L 
Sbjct: 3   GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLV 62

Query: 398 IVGLVRQD------AGIYVCVAANGIG 418
                 +D      A +Y C+A N  G
Sbjct: 63  FPPFRAEDYRQEVHAQVYACLARNQFG 89

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 65.3 bits (159), Expect = 2e-11
 Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 26/122 (21%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C  +N     +  T +               + +P        PT   + G 
Sbjct: 279 VEDSGKYLCVVNNSVGGESVETVL--------------TVTAPLSAKI-DPPTQTVDFGR 323

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
                C   G PI   +W K        DG      + VL+I  + ++D G+Y C   N 
Sbjct: 324 PAVFTCQYTGNPIKTVSWMK--------DGKAIGHSESVLRIESVKKEDKGMYQCFVRND 375

Query: 417 IG 418
             
Sbjct: 376 RE 377

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 26/129 (20%)

Query: 305 YSC--SNLF-DITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLR 361
           Y+C   N F  I +    V                 +                GN   ++
Sbjct: 80  YACLARNQFGSIISRDVHVRAVVA--------QYYEADVN-------KEHVIRGNSAVIK 124

Query: 362 CIA---IGYPIPVYTWSKGE----VSIDGSDGHYKLTLDGVLQIVGLVRQDA-GIYVCVA 413
           C+    +   + V +W   E          DG Y +   G L I  +  +D    Y C  
Sbjct: 125 CLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRT 184

Query: 414 ANGIGDPIR 422
            + +    R
Sbjct: 185 KHRLTGETR 193

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 51.1 bits (122), Expect = 7e-07
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 94  CQAR-CAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPI 152
           C+ +    G    S+     +      +S PR     +  +E    + ++L C A G+P 
Sbjct: 182 CRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPA 241

Query: 153 PVYTWSK 159
           P + W K
Sbjct: 242 PSFRWYK 248

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 44.9 bits (106), Expect = 5e-05
 Identities = 8/38 (21%), Positives = 13/38 (34%)

Query: 122 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            P F       ++        + C A G P+P   W +
Sbjct: 3   GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIR 40

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 81.1 bits (200), Expect = 4e-16
 Identities = 53/365 (14%), Positives = 101/365 (27%), Gaps = 77/365 (21%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIA---IGY 150
           C AR   G+ ++           +       +            GN   ++C+    +  
Sbjct: 117 CLARNQFGSIISRDV-------HVRAVVAQYYEADVNK-EHVIRGNSAVIKCLIPSFVAD 168

Query: 151 PIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMPELTPN 210
            + V +W   E    F                   P  + +  +    +  + + E+ P 
Sbjct: 169 FVEVVSWHTDEEENYF-------------------PGAEYDGKYLVLPSGELHIREVGPE 209

Query: 211 TFLFQWTCVISGK--NARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQY------- 261
                + C    +            +    +  S+    V  +   + +           
Sbjct: 210 DGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALL 269

Query: 262 -IAVCRPL-----YKEGECRPQPQNVCADNCKDDADCT---GQAKCCPNDCG-YSC--SN 309
             A   P+     YK  E   + Q V  ++       T     A     D G Y C  +N
Sbjct: 270 CPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAV--VEDSGKYLCVVNN 327

Query: 310 LFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPI 369
                +  T +               + +P        PT   + G      C   G PI
Sbjct: 328 SVGGESVETVL--------------TVTAPLSAKI-DPPTQTVDFGRPAVFTCQYTGNPI 372

Query: 370 PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
              +W K   +I  S        + VL+I  + ++D G+Y C   N           + +
Sbjct: 373 KTVSWMKDGKAIGHS--------ESVLRIESVKKEDKGMYQCFVRNDRES-AEASAELKL 423

Query: 430 RGNYE 434
            G ++
Sbjct: 424 GGRFD 428

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 78.4 bits (193), Expect = 3e-15
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 18/136 (13%)

Query: 302 DCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTL 360
               ++   L    + T   +P                 P F       ++        +
Sbjct: 10  WLMLFAAVALIACGSQTLAANPP----------DADQKGPVFLKEPTNRIDFSNSTGAEI 59

Query: 361 RCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQD------AGIYVCVA 413
            C A G P+P   W +    ++    G  +++ DG L       +D      A +Y C+A
Sbjct: 60  ECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLA 119

Query: 414 ANGIGDPIRKEFNVIV 429
            N  G  I ++ +V  
Sbjct: 120 RNQFGSIISRDVHVRA 135

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 78.1 bits (192), Expect = 4e-15
 Identities = 29/136 (21%), Positives = 43/136 (31%), Gaps = 21/136 (15%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            ND G Y C   +   +   +  +              N+   P              G 
Sbjct: 499 ANDGGLYKCIAKSKVGVAEHSAKL--------------NVYGLPYIR--QMEKKAIVAGE 542

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ-DAGIYVCVAAN 415
            + + C   GYPI    W +   ++   +   K+  +G L I  + R  D   Y CVA N
Sbjct: 543 TLIVTCPVAGYPIDSIVWERDNRALP-INRKQKVFPNGTLIIENVERNSDQATYTCVAKN 601

Query: 416 GIGDPIRKEFNVIVRG 431
             G   R    V V  
Sbjct: 602 QEGYSARGSLEVQVMV 617

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 73.0 bits (179), Expect = 1e-13
 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPT-VEAEEG 355
            +  G ++C   NL      TT +              N+  PPR+    EPT     +G
Sbjct: 686 ASHAGNFTCHARNLAGHQQFTTPL--------------NVYVPPRW--ILEPTDKAFAQG 729

Query: 356 NFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYV 410
           +   + C A G+P P  TW K      G     K +      +G L +  + + + G Y+
Sbjct: 730 SDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYL 789

Query: 411 CVAANGIGDPIRKEFNVIVRG 431
           C A NGIG  +     + V+ 
Sbjct: 790 CEAINGIGSGLSAVIMISVQA 810

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 69.2 bits (169), Expect = 2e-12
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 23/142 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C   N  +    +  +     +            PP     +      E G 
Sbjct: 398 KEDKGMYQCFVRNDRESAEASAELK----LGGRFD-------PPVI-RQAFQEETMEPGP 445

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSD-------GHYKLTLDGVLQIVGLVRQDAGIY 409
            V L+C+A G P P  +W      I  +D             +   L I  +   D G+Y
Sbjct: 446 SVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLY 505

Query: 410 VCVAANGIGDPIRKEFNVIVRG 431
            C+A + +G        + V G
Sbjct: 506 KCIAKSKVGV-AEHSAKLNVYG 526

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 67.3 bits (164), Expect = 8e-12
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVY-TWSKGEVSIDGSDGHYKLTLD 393
            +   PR   ++     A+ G ++TL C   G  +P+   W+    +I    G     + 
Sbjct: 614 QVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVG 673

Query: 394 ---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
               VL I  +    AG + C A N  G   +    + V 
Sbjct: 674 RRGSVLTIEAVEASHAGNFTCHARNLAGH-QQFTTPLNVY 712

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 22/136 (16%), Positives = 36/136 (26%), Gaps = 26/136 (19%)

Query: 305 YSC--SNLF-DITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLR 361
           Y+C   N F  I +    V                 +                GN   ++
Sbjct: 115 YACLARNQFGSIISRDVHVRAVVA--------QYYEADVN-------KEHVIRGNSAVIK 159

Query: 362 CIA---IGYPIPVYTWSKGEVSI----DGSDGHYKLTLDGVLQIVGLVRQDA-GIYVCVA 413
           C+    +   + V +W   E          DG Y +   G L I  +  +D    Y C  
Sbjct: 160 CLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRT 219

Query: 414 ANGIGDPIRKEFNVIV 429
            + +    R       
Sbjct: 220 KHRLTGETRLSATKGR 235

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 51.1 bits (122), Expect = 8e-07
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 6/67 (8%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
             A  A G+   ++  PD      A    P F       ++        + C A G P+P
Sbjct: 16  AVALIACGSQTLAANPPD------ADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMP 69

Query: 154 VYTWSKG 160
              W + 
Sbjct: 70  EIIWIRS 76

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 45.3 bits (107), Expect = 6e-05
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 10/67 (14%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A+   G     SA       ++ V   P              G  + + C   GYPI 
Sbjct: 507 CIAKSKVGV-AEHSA-------KLNVYGLPYIR--QMEKKAIVAGETLIVTCPVAGYPID 556

Query: 154 VYTWSKG 160
              W + 
Sbjct: 557 SIVWERD 563

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 11/68 (16%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C AR   G     +         + V  PPR+    EPT     +G+   + C A G+P 
Sbjct: 694 CHARNLAGH-QQFTT-------PLNVYVPPRW--ILEPTDKAFAQGSDAKVECKADGFPK 743

Query: 153 PVYTWSKG 160
           P  TW K 
Sbjct: 744 PQVTWKKA 751

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 118 AVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
               PP     +      E G  V L+C+A G P P  +W   
Sbjct: 425 GRFDPPVI-RQAFQEETMEPGPSVFLKCVAGGNPTPEISWELD 466

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 8/67 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A+   G     S         + V   PR   ++     A+ G ++TL C   G  +P
Sbjct: 597 CVAKNQEGYSARGSL-------EVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLP 649

Query: 154 VY-TWSK 159
           +   W+ 
Sbjct: 650 LNIDWTL 656

>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens} Length = 99

 Score = 73.1 bits (180), Expect = 4e-16
 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 6/85 (7%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
           +PP F            EG  V +     G P PV +W +    +      +    +G  
Sbjct: 4   APPTFK--VSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGL 61

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIG 418
             L+I+   R DAG Y C A N  G
Sbjct: 62  CRLRILAAERGDAGFYTCKAVNEYG 86

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 77.5 bits (191), Expect = 6e-16
 Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 19/124 (15%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y+C  SN+    + +  +               +  PPRF    EP+   ++  
Sbjct: 70  KGDAGQYTCYASNVAGKDSCSAQL--------------GVQEPPRFIKKLEPSRIVKQDE 115

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH--YKLTLDGVLQIVGLVRQDAGIYVCVAA 414
                C   G P     W K E  I  S       +    VL++  L  +D+G Y C A 
Sbjct: 116 HTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAH 175

Query: 415 NGIG 418
           N  G
Sbjct: 176 NAAG 179

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 77.1 bits (190), Expect = 8e-16
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 23/138 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y+C   N     +++T++               +  PP F     P VE  +G 
Sbjct: 164 VEDSGDYTCEAHNAAGSASSSTSL--------------KVKEPPVFRKKPHP-VETLKGA 208

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVA 413
            V L C   G P    +W K +  +  S   YK+  +     + I+ +   D G Y C A
Sbjct: 209 DVHLECELQGTPPFQVSWHKDKRELR-SGKKYKIMSENFLTSIHILNVDSADIGEYQCKA 267

Query: 414 ANGIGDPIRKEFNVIVRG 431
           +N +G       ++ ++ 
Sbjct: 268 SNDVGS-YTCVGSITLKA 284

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 8/97 (8%)

Query: 338 SPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--- 393
           +PP F    +P +V+   G   T +C   G      TW+K    I    G+YK+TL    
Sbjct: 4   APPFFD--LKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR-PGGNYKMTLVENT 60

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             L ++ + + DAG Y C A+N  G        + V+
Sbjct: 61  ATLTVLKVTKGDAGQYTCYASNVAGK-DSCSAQLGVQ 96

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A    G   + SA       ++ V  PPRF    EP+   ++       C   G P  
Sbjct: 78  CYASNVAGK-DSCSA-------QLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI 129

Query: 154 VYTWSKG 160
              W K 
Sbjct: 130 KVLWYKD 136

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A  A G+  +SS         + V  PP F     P VE  +G  V L C   G P  
Sbjct: 172 CEAHNAAGS-ASSST-------SLKVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPF 222

Query: 154 VYTWSKG 160
             +W K 
Sbjct: 223 QVSWHKD 229

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} Length = 117

 Score = 73.3 bits (180), Expect = 6e-16
 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI----DGSDGHYKLTL 392
            PPR      P+ +   +G   TL C A G P P   W KG   +    D    H  L  
Sbjct: 8   FPPRIV--EHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65

Query: 393 DGVLQIVGLV-----RQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            G L  + +V     R D G+YVCVA N +G+ +  + ++ V  
Sbjct: 66  SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAA 109

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} Length = 117

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 119 VASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSRKFFLRGF 171
              PPR      P+ +   +G   TL C A G P P   W KG      +       R  
Sbjct: 6   EDFPPRIV--EHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML 63

Query: 172 ISANDLCFLESESGPCTQQEAAWY 195
           + +  L FL    G  ++ +   Y
Sbjct: 64  LPSGSLFFLRIVHGRKSRPDEGVY 87

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 79.1 bits (195), Expect = 7e-16
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 2/126 (1%)

Query: 305 YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA 364
           YSC+  F  T T    +P      +T           +   +  +     G  + L CIA
Sbjct: 187 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 246

Query: 365 IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE 424
            G P P   W K    +      ++   +  L+I  +  +D+G Y C+A+N +G  IR  
Sbjct: 247 SGVPTPDIAWYKKGGDLPSDKAKFENF-NKALRITNVSEEDSGEYFCLASNKMGS-IRHT 304

Query: 425 FNVIVR 430
            +V V+
Sbjct: 305 ISVRVK 310

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 76.4 bits (188), Expect = 4e-15
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDG 386
            S      +   P +   +   V  +EG  +TL+C    G P PV  W    +     D 
Sbjct: 104 LSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDK 163

Query: 387 HYKLTLDGVLQIVGLVRQDA-GIYVCVAANGIGDPIRKEFNVIVR 430
                 +G L    ++ QD    Y C A       I+++    ++
Sbjct: 164 RVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLK 208

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 73.8 bits (181), Expect = 3e-14
 Identities = 25/124 (20%), Positives = 34/124 (27%), Gaps = 21/124 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPT-VEAEEG 355
             D G Y C  SN       T +V               + + P +    EP  +    G
Sbjct: 284 EEDSGEYFCLASNKMGSIRHTISV--------------RVKAAPYWL--DEPKNLILAPG 327

Query: 356 NFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
               L C A G P P   W   GE          +      +           +Y C  +
Sbjct: 328 EDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS 387

Query: 415 NGIG 418
           N  G
Sbjct: 388 NEHG 391

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 73.0 bits (179), Expect = 6e-14
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 6/112 (5%)

Query: 326 VYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDG 383
           +         +  PP     S      +  + + + C A G P P + W++     +I  
Sbjct: 3   IPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAK 62

Query: 384 SDGHYKLTLDGVLQI----VGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                     G L I     G   +  G Y C A N  G  +     + V  
Sbjct: 63  DPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK 114

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 48.3 bits (115), Expect = 4e-06
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 116 RIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           +  +  PP     S      +  + + + C A G P P + W++
Sbjct: 10  QNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR 53

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPI 152
           C AR   GT +++         R+ V+  P +   +   V  +EG  +TL+C    G P 
Sbjct: 94  CFARNKFGTALSNRI-------RLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPS 146

Query: 153 PVYTWSKGEV 162
           PV  W    +
Sbjct: 147 PVIFWMSSSM 156

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 94  CQARC-AGGTFVTSSAAP-DQLENRIAVASPPRFH--NYSEPTVEAEEGNFVTLRCIAIG 149
           C AR     T    +      L  R      P F     +  +     G  + L CIA G
Sbjct: 189 CNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASG 248

Query: 150 YPIPVYTWSK 159
            P P   W K
Sbjct: 249 VPTPDIAWYK 258

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 11/67 (16%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C A    G+ +  +         + V + P +    EP  +    G    L C A G P 
Sbjct: 292 CLASNKMGS-IRHTI-------SVRVKAAPYWL--DEPKNLILAPGEDGRLVCRANGNPK 341

Query: 153 PVYTWSK 159
           P   W  
Sbjct: 342 PTVQWMV 348

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 77.2 bits (190), Expect = 9e-16
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           PP      +     AE G  +T  C A G P P  +W +    I+ ++ +     +  L 
Sbjct: 192 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 251

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           +  ++  D G YVC A N  G+   K+  + V  
Sbjct: 252 VRNIINSDGGPYVCRATNKAGE-DEKQAFLQVFV 284

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 76.8 bits (189), Expect = 1e-15
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
            +  +        VE   G      C AIG P  +  ++     I  S     +  +G  
Sbjct: 2   MALLQVTISLS-KVELSVGESKFFTCTAIGEPESIDWYNPQGEKII-STQRVVVQKEGVR 59

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             L I     +DAGIY C A +  G        + +
Sbjct: 60  SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI 95

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 72.5 bits (178), Expect = 3e-14
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLD 393
            I     F     P  E ++G    + C     P P  +W      +   SD  + +  +
Sbjct: 94  EIYQKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN 152

Query: 394 GVLQIVGLVRQDAGIYVCVAAN 415
             LQI+ + + D GIY C    
Sbjct: 153 NNLQILNINKSDEGIYRCEGRV 174

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 11/82 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C+ R      +            + V  PP      +     AE G  +T  C A G P 
Sbjct: 170 CEGRVEARGEIDFRDI------IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPE 223

Query: 153 PVYTWSKG----EVSRKFFLRG 170
           P  +W +     E + K+ L+G
Sbjct: 224 PAISWFRNGKLIEENEKYILKG 245

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 8/66 (12%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           CQA  A G    ++         + +     F     P  E ++G    + C     P P
Sbjct: 77  CQATDAKGQTQEATV-------VLEIYQKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAP 128

Query: 154 VYTWSK 159
             +W  
Sbjct: 129 AVSWLY 134

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 120 ASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
            +  +        VE   G      C AIG P  +  ++  
Sbjct: 2   MALLQVTISLS-KVELSVGESKFFTCTAIGEPESIDWYNPQ 41

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens} Length = 91

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
           S  +     EPT  +   G+ + L+C+A+G PIP Y W K E+ +             + 
Sbjct: 2   SKLQIC--VEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-------KKLY 52

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            +  +  +  G Y C   N       K+  +I+
Sbjct: 53  MVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens} Length = 91

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 120 ASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEV 162
            S  +     EPT  +   G+ + L+C+A+G PIP Y W K E+
Sbjct: 1   GSKLQIC--VEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNEL 42

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A Length = 106

 Score = 72.4 bits (178), Expect = 1e-15
 Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 5/96 (5%)

Query: 326 VYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD 385
           ++    ++       R        +   EG      C   G P+P  TW +    +  + 
Sbjct: 1   MHHHHHHSSKTTLAARILTKPRS-MTVYEGESARFSCDTDGEPVPTVTWLRKGQVLS-TS 58

Query: 386 GHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG 418
             +++T        +I  +   D G Y  V  N  G
Sbjct: 59  ARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEG 94

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A Length = 106

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 9/42 (21%), Positives = 12/42 (28%), Gaps = 1/42 (2%)

Query: 119 VASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
                R        +   EG      C   G P+P  TW + 
Sbjct: 11  TTLAARILTKPRS-MTVYEGESARFSCDTDGEPVPTVTWLRK 51

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 79.1 bits (195), Expect = 1e-15
 Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 20/136 (14%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y+C  SN+    + +  +               +  PPRF    EP+   ++  
Sbjct: 262 KGDAGQYTCYASNVAGKDSCSAQL--------------GVQEPPRFIKKLEPSRIVKQDE 307

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--GVLQIVGLVRQDAGIYVCVAA 414
                C   G P     W K E  I  S       ++   VL++  L  +D+G Y C A 
Sbjct: 308 HTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAH 367

Query: 415 NGIGDPIRKEFNVIVR 430
           N  G       ++ V+
Sbjct: 368 NAAGS-ASSSTSLKVK 382

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 76.4 bits (188), Expect = 9e-15
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 20/138 (14%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +  G Y+C  SN     +++  ++      +     P     P        +V+   G 
Sbjct: 166 QSHVGQYNCSASNPLGTASSSAKLT-----LSEHEVPPFFDLKPV-------SVDLALGE 213

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVA 413
             T +C   G      TW+K    I    G+YK+TL      L ++ + + DAG Y C A
Sbjct: 214 SGTFKCHVTGTAPIKITWAKDNREIR-PGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 272

Query: 414 ANGIGDPIRKEFNVIVRG 431
           +N  G        + V+ 
Sbjct: 273 SNVAGK-DSCSAQLGVQE 289

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 74.8 bits (184), Expect = 3e-14
 Identities = 27/136 (19%), Positives = 40/136 (29%), Gaps = 22/136 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C  SN     T   +++              + +PPRF       +    G 
Sbjct: 449 SADIGEYQCKASNDVGSDTCVGSIT--------------LKAPPRFVKKLSD-ISTVVGE 493

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVA 413
            V L+    G       W K +  I     +  ++       LQ       +AG Y C  
Sbjct: 494 EVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQI 553

Query: 414 ANGIGDPIRKEFNVIV 429
            N  G        + V
Sbjct: 554 KNEAGT-QECFATLSV 568

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 74.5 bits (183), Expect = 4e-14
 Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 20/139 (14%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G Y+C   N      ++  +                  PP F       V    G 
Sbjct: 70  HSDVGEYTCKAENSVGAVASSAVLVIKER-----------KLPPSFA-RKLKDVHETLGF 117

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVA 413
            V   C   G      +W K    +   D + + +       LQI+   +   G Y C A
Sbjct: 118 PVAFECRINGSEPLQVSWYKDGELLK-DDANLQTSFIHNVATLQILQTDQSHVGQYNCSA 176

Query: 414 ANGIGDPIRKEFNVIVRGN 432
           +N +G        + +  +
Sbjct: 177 SNPLGT-ASSSAKLTLSEH 194

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 74.1 bits (182), Expect = 4e-14
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
            +  PP F     P VE  +G  V L C   G P    +W K +  +  S   YK+  + 
Sbjct: 380 KVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPFQVSWHKDKREL-RSGKKYKIMSEN 437

Query: 395 ---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
               + I+ +   D G Y C A+N +G       ++ ++
Sbjct: 438 FLTSIHILNVDSADIGEYQCKASNDVGS-DTCVGSITLK 475

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 72.9 bits (179), Expect = 1e-13
 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 6/96 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GV 395
           PP F    E  VEA  G  +TL+C   G P     W K    +  S   YK+        
Sbjct: 5   PPYFIEPLEH-VEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLR-SAPAYKMQFKNNVAS 62

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           L I  +   D G Y C A N +G  +     ++++ 
Sbjct: 63  LVINKVDHSDVGEYTCKAENSVGA-VASSAVLVIKE 97

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A    G   + SA       ++ V  PPRF    EP+   ++       C   G P  
Sbjct: 270 CYASNVAGK-DSCSA-------QLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI 321

Query: 154 VYTWSKG 160
              W K 
Sbjct: 322 KVLWYKD 328

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A  A G+  +SS         + V  PP F     P VE  +G  V L C   G P  
Sbjct: 364 CEAHNAAGS-ASSST-------SLKVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPF 414

Query: 154 VYTWSKGEV 162
             +W K + 
Sbjct: 415 QVSWHKDKR 423

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 17/69 (24%), Positives = 20/69 (28%), Gaps = 6/69 (8%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A  + G  V SSA             PP F       V    G  V   C   G    
Sbjct: 78  CKAENSVGA-VASSAV----LVIKERKLPPSFA-RKLKDVHETLGFPVAFECRINGSEPL 131

Query: 154 VYTWSKGEV 162
             +W K   
Sbjct: 132 QVSWYKDGE 140

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 122 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           PP F    E  VEA  G  +TL+C   G P     W K
Sbjct: 5   PPYFIEPLEH-VEAAIGEPITLQCKVDGTPEIRIAWYK 41

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 9/66 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A    G+  T           I + +PPRF       +    G  V L+    G    
Sbjct: 457 CKASNDVGS-DTCVG-------SITLKAPPRFVKKLSD-ISTVVGEEVQLQATIEGAEPI 507

Query: 154 VYTWSK 159
              W K
Sbjct: 508 SVAWFK 513

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A    GT   SS+A   L        PP F +    +V+   G   T +C   G    
Sbjct: 174 CSASNPLGT--ASSSAKLTLSEH---EVPPFF-DLKPVSVDLALGESGTFKCHVTGTAPI 227

Query: 154 VYTWSKG 160
             TW+K 
Sbjct: 228 KITWAKD 234

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 33/143 (23%), Positives = 45/143 (31%), Gaps = 15/143 (10%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVS------PAYPVYTSTPYTPNIPSPPRFHNYSEPTV 350
           PND G Y     +       T  +S                      +  R        V
Sbjct: 173 PNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVV 232

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQDA 406
             +EG  + L C   G P P  +W K E ++   D H  L  +        I G+   D+
Sbjct: 233 TIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD-HCNLKFEAGRTAYFTINGVSTADS 291

Query: 407 GIYVCVAANGIGDPIRKEFNVIV 429
           G Y  V  N  G     +F V V
Sbjct: 292 GKYGLVVKNKYGS-ETSDFTVSV 313

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 65.7 bits (160), Expect = 9e-12
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 6/99 (6%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLD 393
           +  + P F      + E      V L+C            W K E  I   D  +     
Sbjct: 3   DPFTGPHF--VEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREIS-VDEKHDFKDG 59

Query: 394 G-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
              L I    ++DAGIY  +  +  G   +    ++   
Sbjct: 60  ICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKLVDEA 97

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 63.0 bits (153), Expect = 5e-11
 Identities = 16/125 (12%), Positives = 29/125 (23%), Gaps = 12/125 (9%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y     +      +   +                       + ++  +++    
Sbjct: 70  KKDAGIYEVILKDDRGKDKSRLKLVDEAF-----KELMMEVCKKIALSATDLKIQSTAEG 124

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVA 413
                 +          WS    +I       K  + G    LQI      D G YV   
Sbjct: 125 IQLYSFVTYYVEDLKVNWSHNGSAIR-YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMEL 183

Query: 414 ANGIG 418
            +G  
Sbjct: 184 FDGKT 188

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 87  NFMTEEACQARCAGGTFVTSSAAPDQLENR-IAVASPPRFHNYSEPTVEAEEGNFVTLRC 145
           +  T        +G  +  + A   +L+   IA  +  R        V  +EG  + L C
Sbjct: 185 DGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 244

Query: 146 IAIGYPIPVYTWSKGEV 162
              G P P  +W K E 
Sbjct: 245 NVWGDPPPEVSWLKNEK 261

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 7/85 (8%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---- 393
            P F    E   +     +  TL C   G+P P+  W +    I      Y++       
Sbjct: 4   APHF--KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIG 418
             L I  +   DA +Y   A N  G
Sbjct: 62  HQLIIASVTDDDATVYQVRATNQGG 86

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 21/142 (14%)

Query: 297 KCCPNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTP-YTPNIPSPPRFHNYSEPTVEA 352
               +D   Y    +N     + T ++     V      + P               V A
Sbjct: 68  SVTDDDATVYQVRATNQGGSVSGTASLE----VEVPAKIHLPKTLEGMG-------AVHA 116

Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGI 408
             G  V+++    G P PV TW KG+  ID ++GHY++ +      ++   G+ R+DAG 
Sbjct: 117 LRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGF 175

Query: 409 YVCVAANGIGDPIRKEFNVIVR 430
           YV  A N  G   +K   + V 
Sbjct: 176 YVVCAKNRFGI-DQKTVELDVA 196

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 120 ASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           A  P F    E   +     +  TL C   G+P P+  W + 
Sbjct: 2   AMAPHF--KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ 41

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A Length = 93

 Score = 71.2 bits (175), Expect = 2e-15
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---V 395
            P+    S   ++ + G    L    IG P P  TW+ G+           +        
Sbjct: 2   KPKILTASR-KIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAA-LAPELLVDAKSSTTS 59

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           +      R D+G Y     N +G+     F VIV+
Sbjct: 60  IFFPSAKRADSGNYKLKVKNELGE-DEAIFEVIVQ 93

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A Length = 93

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 122 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV 162
            P+    S   ++ + G    L    IG P P  TW+ G+ 
Sbjct: 2   KPKILTASR-KIKIKAGFTHNLEVDFIGAPDPTATWTVGDS 41

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 32/146 (21%), Positives = 44/146 (30%), Gaps = 17/146 (11%)

Query: 300 PNDCG-YSC---------SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRF---HNYS 346
             D G YSC          +     T   +             T      P +       
Sbjct: 70  HEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMD 129

Query: 347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVR 403
           +  +     N V  RC A G P P  +W K      G      + L      L +  +V 
Sbjct: 130 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP 189

Query: 404 QDAGIYVCVAANGIGDPIRKEFNVIV 429
            D G Y CV  N  G  IR+ + + V
Sbjct: 190 SDRGNYTCVVENKFGS-IRQTYTLDV 214

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 18/116 (15%), Positives = 29/116 (25%), Gaps = 3/116 (2%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
              P      +  +    G+ V L C    G P+    W K    +        +     
Sbjct: 5   AEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLV-PSERVLVG-PQR 62

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYG 451
           LQ++    +D+G Y C               V    +        D         G
Sbjct: 63  LQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTG 118

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 30/137 (21%), Positives = 42/137 (30%), Gaps = 28/137 (20%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
           P+D G Y+C   N F     T T+     V   +P       P            A  G+
Sbjct: 189 PSDRGNYTCVVENKFGSIRQTYTLD----VLERSP-----HRPILQAGLPANQT-AVLGS 238

Query: 357 FVTLRCIAIGYPIPVYTWSKGE---------------VSIDGSDGHYKLTLDGVLQIVGL 401
            V   C       P   W K                   +  +  +       VL +  +
Sbjct: 239 DVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNV 298

Query: 402 VRQDAGIYVCVAANGIG 418
             +DAG Y C+A N IG
Sbjct: 299 TFEDAGEYTCLAGNSIG 315

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 43.8 bits (103), Expect = 9e-05
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 105 TSSAAPDQLENRIAVASPPRF---HNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
                 D+ E+       P +       +  +     N V  RC A G P P  +W K
Sbjct: 102 DDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK 159

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y+C  +N      T++ +     +  +    P            +       G+
Sbjct: 72  QEDEGVYTCIATNEVGEVETSSKLL----LQAT----PQFHPGYPL----KEKYYGAVGS 119

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQ-DAGIYVCV 412
            + L  + IG P+P  TW  G+  +  +  +  +        L +  + R+  AG Y   
Sbjct: 120 TLRLHVMYIGRPVPAMTWFHGQKLLQ-NSENITIENTEHYTHLVMKNVQRKTHAGKYKVQ 178

Query: 413 AANGIGDPIRKEFNVIVR 430
            +N  G  +    +V ++
Sbjct: 179 LSNVFGT-VDAILDVEIQ 195

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 73.2 bits (180), Expect = 5e-15
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 7/85 (8%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
             P      E   V  + G    L C  +G P+P   W +    +      YK++ DG  
Sbjct: 6   EAPGI--RKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELI-QSRKYKMSSDGRT 62

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIG 418
             L ++   ++D G+Y C+A N +G
Sbjct: 63  HTLTVMTEEQEDEGVYTCIATNEVG 87

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFH--NYSEPTVEAEEGNFVTLRCIAIGYP 151
           C A    G  V +S+       ++ + + P+FH     +       G+ + L  + IG P
Sbjct: 80  CIATNEVGE-VETSS-------KLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRP 131

Query: 152 IPVYTWSKG 160
           +P  TW  G
Sbjct: 132 VPAMTWFHG 140

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 3/42 (7%)

Query: 120 ASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
              P      E   V  + G    L C  +G P+P   W + 
Sbjct: 5   GEAPGI--RKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRF 44

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 78.6 bits (193), Expect = 2e-15
 Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 15/135 (11%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C   +                +       P I                  G 
Sbjct: 634 LQDQGDYVCLAQDRKTKKRHCVVRQ----LTVLERVAPTITGNLE-------NQTTSIGE 682

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
            + + C A G P P   W K   ++    G      +  L I  + ++D G+Y C A + 
Sbjct: 683 SIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSV 742

Query: 417 IGDPIRKEFNVIVRG 431
           +G   + E   I+ G
Sbjct: 743 LGC-AKVEAFFIIEG 756

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 76.3 bits (187), Expect = 1e-14
 Identities = 56/373 (15%), Positives = 98/373 (26%), Gaps = 78/373 (20%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEP--TVEAEEGNFVTLRCIAIGYP 151
           C A     T   S+         + V   P     S     VEA  G  V +    +GYP
Sbjct: 307 CAASSGLMTKKNST--------FVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYP 358

Query: 152 IPVYTWSKGEVSRKFFLRGFISANDLCFL----ESESGP--CTQQEAAWYFDRNSFITM- 204
            P   W K            I A  +  +    E ++G              ++  +++ 
Sbjct: 359 PPEIKWYKN--GIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLV 416

Query: 205 ----PELTPNTFLFQWTCVISGKNARCRCF---NP-------CQNQDPQCPSNTRCAVDL 250
               P++   + +        G      C     P           + +C +    AV +
Sbjct: 417 VYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSV 476

Query: 251 VRNPETRETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCG-YSC-- 307
                  E + +   +   K    + Q   +   N       +       N    Y C  
Sbjct: 477 TNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTV----STLVIQAANVSALYKCEA 532

Query: 308 SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGY 367
            N         +               ++   P      +P ++  E   V+L C A   
Sbjct: 533 VNKVGRGERVISF--------------HVTRGPEIT--LQPDMQPTEQESVSLWCTADRS 576

Query: 368 PIPVYTWSK-GEVSIDGSDGHYKLTLD---------------------GVLQIVGLVRQD 405
                TW K G   +    G     +                       ++++     QD
Sbjct: 577 TFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQD 636

Query: 406 AGIYVCVAANGIG 418
            G YVC+A +   
Sbjct: 637 QGDYVCLAQDRKT 649

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 74.0 bits (181), Expect = 7e-14
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 19/135 (14%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G Y+C  S+       +T V          P+                 VEA  G 
Sbjct: 299 RSDQGLYTCAASSGLMTKKNSTFVRVHEK-----PFVAFGSGME-------SLVEATVGE 346

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
            V +    +GYP P   W K  + ++ +   + +    VL I+ +  +D G Y  +  N 
Sbjct: 347 RVRIPAKYLGYPPPEIKWYKNGIPLESN---HTIKAGHVLTIMEVSERDTGNYTVILTNP 403

Query: 417 IGDPIRK-EFNVIVR 430
           I    +    +++V 
Sbjct: 404 ISKEKQSHVVSLVVY 418

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 60.2 bits (145), Expect = 1e-09
 Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 13/107 (12%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK------------GEVSIDGS 384
                        +E   G  + L C A         ++                 +   
Sbjct: 221 YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            G         L I G+ R D G+Y C A++G+    +    V V  
Sbjct: 281 SGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVHE 326

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 60.2 bits (145), Expect = 1e-09
 Identities = 20/139 (14%), Positives = 34/139 (24%), Gaps = 15/139 (10%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            ND G Y C        +     V            +P I S      +    +   +  
Sbjct: 95  GNDTGAYKCFYRETDLASVIYVYVQ--------DYRSPFIASVSD--QHGVVYITENKNK 144

Query: 357 FVTLRCIAIGYPIPVYTWS-KGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
            V + C+     + V   +   E                   I   +   AG+  C A  
Sbjct: 145 TVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKI 204

Query: 416 GIGDPIRKEFNVIVRGNYE 434
                 +    ++V   Y 
Sbjct: 205 NDES-YQSIMYIVVVVGYR 222

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 56.7 bits (136), Expect = 2e-08
 Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 8/86 (9%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
              PR     +  +  +    + + C   G     + W   +   +          DG  
Sbjct: 29  LDLPRLS-IQKDILTIKANTTLQITCR--GQRDLDWLWPNNQSGSE-QRVEVTECSDGLF 84

Query: 395 --VLQIVGLVRQDAGIYVCVAANGIG 418
              L I  ++  D G Y C       
Sbjct: 85  CKTLTIPKVIGNDTGAYKCFYRETDL 110

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 48.6 bits (115), Expect = 6e-06
 Identities = 22/142 (15%), Positives = 36/142 (25%), Gaps = 39/142 (27%)

Query: 326 VYTSTPYTPNIPSPPRFHN--YSEPTVEAEEGNFVTLRCIAIGYPIPVY-TWSK------ 376
              S   +  +  PP+        P    + G   TL C     P P +  W        
Sbjct: 407 EKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEEC 466

Query: 377 --------------------------GEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAG 407
                                     G   I+ +   + L       V  +V      + 
Sbjct: 467 ANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSA 526

Query: 408 IYVCVAANGIGDPIRKEFNVIV 429
           +Y C A N +G    +  +  V
Sbjct: 527 LYKCEAVNKVGR-GERVISFHV 547

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 43.6 bits (102), Expect = 2e-04
 Identities = 12/68 (17%), Positives = 17/68 (25%), Gaps = 5/68 (7%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A+                +  +     P      E       G  + + C A G P P
Sbjct: 642 CLAQDRKTK-KRHCV---VRQLTVLERVAPTITGNLEN-QTTSIGESIEVSCTASGNPPP 696

Query: 154 VYTWSKGE 161
              W K  
Sbjct: 697 QIMWFKDN 704

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 73.7 bits (181), Expect = 4e-15
 Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCI-AIGYPIPVYTWSKGEVSID-------GSDGHY 388
               F    EP      +G    L C    G P P   W K  V +D       G+    
Sbjct: 107 LRDDFR--VEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164

Query: 389 KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           ++   G L I  +   D G Y C+A N +G        +IV+
Sbjct: 165 RIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 9/100 (9%)

Query: 337 PSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDGSDGHYKLTLD 393
              PR      PT +  ++    TL C   G P P   W K    VS +    H     D
Sbjct: 7   YQSPRI--IEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKD 64

Query: 394 GVL----QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           G L     + G   QD G Y CVA N +G  + +  ++ +
Sbjct: 65  GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQI 104

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 19/86 (22%), Positives = 25/86 (29%), Gaps = 12/86 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVAS-PPRFHNYSEPT-VEAEEGNFVTLRCI-AIGY 150
           C A+   G  V+  A        + +A     F    EP      +G    L C    G 
Sbjct: 86  CVAKNRVGQAVSRHA-------SLQIAVLRDDFR--VEPKDTRVAKGETALLECGPPKGI 136

Query: 151 PIPVYTWSKGEVSRKFFLRGFISAND 176
           P P   W K  V           A+ 
Sbjct: 137 PEPTLIWIKDGVPLDDLKAMSFGASS 162

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 70.1 bits (172), Expect = 4e-15
 Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 9/94 (9%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
              +     E       G  VTL C     P P   W K     DG      L    VL 
Sbjct: 9   EEVQLVVEPEGG-AVAPGGTVTLTCEVPAQPSPQIHWMK-----DGVP--LPLPPSPVLI 60

Query: 398 IVGLVRQDAGIYVCVAANGIGDP-IRKEFNVIVR 430
           +  +  QD G Y CVA +    P   +  ++ + 
Sbjct: 61  LPEIGPQDQGTYSCVATHSSHGPQESRAVSISII 94

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 10/41 (24%), Positives = 11/41 (26%), Gaps = 1/41 (2%)

Query: 119 VASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
                +     E       G  VTL C     P P   W K
Sbjct: 7   GLEEVQLVVEPEGG-AVAPGGTVTLTCEVPAQPSPQIHWMK 46

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 69.7 bits (171), Expect = 6e-15
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           S        E  +    G+ + LRC           W +  V +       ++T    ++
Sbjct: 2   SSGSSGVEVESFL-VHPGDLLQLRCRLRDDV-QSINWLRDGVQL-AESNRTRIT-GEEVE 57

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +   V  D+G+Y CV ++  G      F+V V
Sbjct: 58  VQDSVPADSGLYACVTSSPSGS-DTTYFSVNV 88

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 100

 Score = 69.7 bits (171), Expect = 8e-15
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 337 PSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
             PPRF     P  +  +EG F  +     G P P  +W     ++   D H  +  +  
Sbjct: 3   MGPPRF--IQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKG 60

Query: 395 --VLQIVGLVRQDAGIYVCVAANGIG 418
              L    +   DAG Y CVA N  G
Sbjct: 61  LHSLIFEVVRASDAGAYACVAKNRAG 86

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 100

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 3/43 (6%)

Query: 118 AVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK 159
               PPRF     P  +  +EG F  +     G P P  +W  
Sbjct: 1   GAMGPPRF--IQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYL 41

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} Length = 108

 Score = 69.7 bits (171), Expect = 8e-15
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQI 398
            P      E       G  + + C A G P P   W K   ++    G      +  L I
Sbjct: 10  APTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTI 68

Query: 399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
             + ++D G+Y C A + +G   + E   I+ G
Sbjct: 69  RRVRKEDEGLYTCQACSVLGC-AKVEAFFIIEG 100

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} Length = 108

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 10/44 (22%), Positives = 13/44 (29%), Gaps = 1/44 (2%)

Query: 117 IAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           +     P      E       G  + + C A G P P   W K 
Sbjct: 5   VLERVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFKD 47

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 114

 Score = 70.0 bits (172), Expect = 8e-15
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 6/97 (6%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
           S P+   + E   +   G  V L     G      TW K    I     H K+       
Sbjct: 6   SGPQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKFRKQIQ-ESEHMKVENSENGS 63

Query: 395 VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            L I+   ++  G Y  +  N +G   + + N+ V  
Sbjct: 64  KLTILAARQEHCGCYTLLVENKLGS-RQAQVNLTVVD 99

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 114

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 1/40 (2%)

Query: 121 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           S P+   + E   +   G  V L     G      TW K 
Sbjct: 6   SGPQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKF 44

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             + G YS   +N     T+T  +     V           +PP F    +  +   +G+
Sbjct: 72  KANSGRYSLKATNGSGQATSTAELL----VKAE-------TAPPNFVQRLQS-MTVRQGS 119

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVA 413
            V L+    G P PV  + +    I  S   ++++ +G    L I     +D+G Y   A
Sbjct: 120 QVRLQVRVTGIPTPVVKFYRDGAEIQ-SSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNA 178

Query: 414 ANGIG 418
            N +G
Sbjct: 179 TNSVG 183

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH-YKLTLDG-- 394
            P F        V   EG+  T      G+P+P  +W +    I  S     +++     
Sbjct: 5   APTF--TQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGR 62

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIG 418
             L I  + + ++G Y   A NG G
Sbjct: 63  AKLTIPAVTKANSGRYSLKATNGSG 87

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
            +A    G   TS+A   +L  + A  +PP F    +  +   +G+ V L+    G P P
Sbjct: 80  LKATNGSGQ-ATSTA---ELLVK-AETAPPNFVQRLQS-MTVRQGSQVRLQVRVTGIPTP 133

Query: 154 VYTWSKG 160
           V  + + 
Sbjct: 134 VVKFYRD 140

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A Length = 137

 Score = 70.4 bits (172), Expect = 1e-14
 Identities = 22/102 (21%), Positives = 29/102 (28%), Gaps = 18/102 (17%)

Query: 333 TPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH---- 387
            P       F     P   +   G  V L C A+G P+P   W       +         
Sbjct: 15  VPRGSHMAGF--VQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDG 72

Query: 388 -----------YKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                      Y       + I  LV +D G Y C A+N   
Sbjct: 73  ARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPD 114

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A Length = 137

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)

Query: 119 VASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            +    F     P   +   G  V L C A+G P+P   W  
Sbjct: 18  GSHMAGF--VQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWF 57

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 73.8 bits (181), Expect = 1e-14
 Identities = 19/135 (14%), Positives = 31/135 (22%), Gaps = 18/135 (13%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             + G Y C         +TT  +               +  P    N     V   EG 
Sbjct: 60  FKNTGTYRCTELEDPMAGSTTIHL--------------YVKDPAHSWNLLAQEVTVVEGQ 105

Query: 357 FVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
              L C+     +    +  +           Y  +      I      D+  YVC    
Sbjct: 106 EAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMV 165

Query: 416 GIGDPIRKEFNVIVR 430
              +       + V 
Sbjct: 166 NGRESTSTGIWLKVN 180

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 62.7 bits (152), Expect = 6e-11
 Identities = 23/102 (22%), Positives = 33/102 (32%), Gaps = 7/102 (6%)

Query: 333 TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-----GEVSIDGSDGH 387
               P PP+        V    G    + C A    +      K      E+ ++     
Sbjct: 180 NRVHPEPPQIKLEPSKLV-RIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQD 238

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                   L +  +  QDAGIY CVA+N +G       N  V
Sbjct: 239 NYYKKVRALSLNAVDFQDAGIYSCVASNDVGT-RTATMNFQV 279

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 49.9 bits (119), Expect = 9e-07
 Identities = 18/95 (18%), Positives = 28/95 (29%), Gaps = 9/95 (9%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
              P     S P +  E G  VTLRC++ G  +    W          D     +    L
Sbjct: 2   DPAPVIE-PSGPELVVEPGETVTLRCVSNG-SV---EWDGPISPYWTLDPE---SPGSTL 53

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                  ++ G Y C              ++ V+ 
Sbjct: 54  TTRNATFKNTGTYRCTELEDPMA-GSTTIHLYVKD 87

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 10/66 (15%), Positives = 17/66 (25%), Gaps = 4/66 (6%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+    G    ++      L+       PP+        V    G    + C A    + 
Sbjct: 161 CKTMVNGRESTSTGI---WLKVNRVHPEPPQIKLEPSKLV-RIRGEAAQIVCSATNAEVG 216

Query: 154 VYTWSK 159
                K
Sbjct: 217 FNVILK 222

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 73.0 bits (179), Expect = 1e-14
 Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 329 STPYTPNIPSPPRF---HNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD 385
           + P T      P +       +  +     N V  RC A G P P  +W K      G  
Sbjct: 1   ADPDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH 60

Query: 386 GHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
               + L      L +  +V  D G Y CV  N  G  IR+ + + V
Sbjct: 61  RIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYTLDV 106

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 67.7 bits (165), Expect = 8e-13
 Identities = 35/149 (23%), Positives = 49/149 (32%), Gaps = 28/149 (18%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
           P+D G Y+C   N F     T T+     V   +P       P            A  G+
Sbjct: 81  PSDRGNYTCVVENKFGSIRQTYTLD----VLERSP-----HRPILQAGLPA-NQTAVLGS 130

Query: 357 FVTLRCIAIGYPIPVYTWSKGE--------------VSIDGSDGHYKLTLDGVLQIVGLV 402
            V   C       P   W K                V++  S     +  D  L++  + 
Sbjct: 131 DVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVS 190

Query: 403 RQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            +D G Y+C A N IG    K F + V G
Sbjct: 191 ERDGGEYLCRATNFIGV-AEKAFWLSVHG 218

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 3/43 (6%)

Query: 120 ASPPRF---HNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
              P +       +  +     N V  RC A G P P  +W K
Sbjct: 9   TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK 51

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 75.1 bits (184), Expect = 1e-14
 Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 7/132 (5%)

Query: 305 YSCSNL-FDITTTTTTVSPAYPVYTSTPYTPNI---PSPPRFHNYSEPTVEAEEGNFVTL 360
             C  +      ++   S +YP+ + +P        P       Y    VE +    +TL
Sbjct: 10  IKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTV-YEAAAVEVDVSASITL 68

Query: 361 RCIAIGYPIPVYTWSKGEVSIDGSDG-HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
           + +          W     S++       +      + I+ +    AG Y+    +   +
Sbjct: 69  QVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATN 128

Query: 420 PIRKEFNVIVRG 431
                F V +R 
Sbjct: 129 -YTILFTVSIRN 139

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 67.0 bits (163), Expect = 5e-12
 Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 4/98 (4%)

Query: 335 NIPSPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
            I      +  +     E ++            YP    TW+    S         L   
Sbjct: 320 TIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSF--PCEQKGLDNG 377

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
             +      +   G Y+  A N       K F + +R 
Sbjct: 378 YSISKFCNHKHQPGEYIFHAENDDAQ-FTKMFTLNIRS 414

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 6/104 (5%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDG 386
            +  +T +I +   +     P     E     L CI+   P P+  W           + 
Sbjct: 129 YTILFTVSIRNTLLYTL-RRPYFRKMENQ-DALVCISESVPEPIVEWVLCDSQGESCKEE 186

Query: 387 HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
              +       +  L   D     C A N +G    + F + + 
Sbjct: 187 SPAVVKKEEKVLHELFGTD---IRCCARNELGRECTRLFTIDLN 227

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 57.4 bits (138), Expect = 7e-09
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 12/100 (12%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGS-- 384
            +  +T ++   P+    + P +  + G  + +RC A+        TW     +++    
Sbjct: 218 CTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNY 274

Query: 385 ------DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                   +  +       +  + R D G Y C ++    
Sbjct: 275 FEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPS 314

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 47.4 bits (112), Expect = 9e-06
 Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 101 GTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            ++   S +P+ L   +   S    +      VE +    +TL+ +          W  
Sbjct: 28  SSYPMVSESPEDLGCALRPQSSGTVY--EAAAVEVDVSASITLQVLVDAPGNISCLWVF 84

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 72.6 bits (178), Expect = 1e-14
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 7/101 (6%)

Query: 335 NIPSPPRFHNYSEP---TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT 391
           N    P + N  +           N V  RC A G P+P   W K               
Sbjct: 11  NNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYK 70

Query: 392 L---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +      L +  +V  D G Y CV  N  G  I   +++ V
Sbjct: 71  VRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHLDV 110

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 64.9 bits (158), Expect = 6e-12
 Identities = 27/135 (20%), Positives = 38/135 (28%), Gaps = 26/135 (19%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
           P+D G Y+C   N +     T  +     V   +        P               G 
Sbjct: 85  PSDKGNYTCVVENEYGSINHTYHLD----VVERSR-----HRPILQAGLPANA-STVVGG 134

Query: 357 FVTLRCIAIGYPIPVYTWSKG------EVSIDGS-------DGHYKLTLDGVLQIVGLVR 403
            V   C       P   W K       +   DG              +   VL +  +  
Sbjct: 135 DVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTE 194

Query: 404 QDAGIYVCVAANGIG 418
            DAG Y+C  +N IG
Sbjct: 195 ADAGEYICKVSNYIG 209

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 3/54 (5%)

Query: 109 APDQLENRIAVASPPRFHNYSEP---TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           A D +         P + N  +           N V  RC A G P+P   W K
Sbjct: 2   AEDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK 55

>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus} Length = 95

 Score = 68.7 bits (168), Expect = 2e-14
 Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 331 PYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL 390
           P  P    P       E ++    G+ + LRC           W +  V +       ++
Sbjct: 1   PTLPEQAQPWGVPVEVE-SLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQL-VESNRTRI 57

Query: 391 TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           T    +++   +  D+G+Y CV ++  G      F+V V
Sbjct: 58  T-GEEVEVRDSIPADSGLYACVTSSPSGS-DTTYFSVNV 94

>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 116

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 337 PSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
              P F    +P   +  EG+ V L C     P P   W +    +  +     L  D  
Sbjct: 13  KRAPMF--IYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNT 70

Query: 395 ---VLQIVGLVRQDAGIYVCVAANGIG 418
               L I  + ++DAG Y   A N  G
Sbjct: 71  GRVTLLIKDVNKKDAGWYTVSAVNEAG 97

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 75.0 bits (184), Expect = 3e-14
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 1/95 (1%)

Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
               P+    S  +   E+ + V   C           W  G+ S+  S        +  
Sbjct: 463 SAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQ-SLPVSPRLQLSNGNRT 521

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           L +  + R DA  YVC   N +         + V 
Sbjct: 522 LTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVL 556

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 71.1 bits (174), Expect = 4e-13
 Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 11/132 (8%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
            N+ G Y+C      T    T      VY           PP+    S  +   E+ + V
Sbjct: 257 VNNSGSYTCQAHNSDTGLNRTTVTTITVY---------AEPPKPFITSNNSNPVEDEDAV 307

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
            L C         Y W     S+  S        +  L ++ + R D G Y C   N + 
Sbjct: 308 ALTCEPEIQNTT-YLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELS 366

Query: 419 DPIRKEFNVIVR 430
                   + V 
Sbjct: 367 VDHSDPVILNVL 378

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 71.1 bits (174), Expect = 5e-13
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
           P  P+    S  +   E+ + V   C           W   + S+  S        +  L
Sbjct: 108 PELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLWWVNNQ-SLPVSPRLQLSNGNRTL 166

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            +  + R D   Y C   N +         + V
Sbjct: 167 TLFNVTRNDTASYKCETQNPVSARRSDSVILNV 199

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 67.7 bits (165), Expect = 5e-12
 Identities = 20/109 (18%), Positives = 29/109 (26%), Gaps = 10/109 (9%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
            S     N+   P     S        G  + L C A   P   Y+W         +   
Sbjct: 191 RSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQST--- 247

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR-KEFNVIVRGNYEQ 435
                   L I  +   ++G Y C A N      R     + V     +
Sbjct: 248 ------QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPK 290

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 65.4 bits (159), Expect = 3e-11
 Identities = 20/91 (21%), Positives = 30/91 (32%), Gaps = 9/91 (9%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
            S P T ++   P     S P      G  + L C +   P P Y+W    +    +   
Sbjct: 547 RSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT--- 603

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                  VL I  +   + G Y C  +N   
Sbjct: 604 ------QVLFIAKITPNNNGTYACFVSNLAT 628

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 63.0 bits (153), Expect = 1e-10
 Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 9/91 (9%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
            S P   N+   P     S        G  ++L C A   P   Y+W          DG+
Sbjct: 369 HSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLI--------DGN 420

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                   L I  +  +++G+Y C A N   
Sbjct: 421 I-QQHTQELFISNITEKNSGLYTCQANNSAS 450

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 60.7 bits (147), Expect = 7e-10
 Identities = 15/89 (16%), Positives = 23/89 (25%), Gaps = 18/89 (20%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------------------VSIDGSDGHYK 389
                 EG  V L    +   +  Y+W KGE                         G   
Sbjct: 7   TPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREI 66

Query: 390 LTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
           +  +  L I  +++ D G Y         
Sbjct: 67  IYPNASLLIQNIIQNDTGFYTLHVIKSDL 95

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 46.1 bits (109), Expect = 3e-05
 Identities = 12/69 (17%), Positives = 18/69 (26%), Gaps = 7/69 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+ +       + S         + V   P     S        G  + L C A   P  
Sbjct: 181 CETQNPVSARRSDSV-------ILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPA 233

Query: 154 VYTWSKGEV 162
            Y+W     
Sbjct: 234 QYSWFVNGT 242

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 7/66 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C  +       +           + V   P     S        G  ++L C A   P  
Sbjct: 359 CGIQNELSVDHSDPV-------ILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPA 411

Query: 154 VYTWSK 159
            Y+W  
Sbjct: 412 QYSWLI 417

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 7/66 (10%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C  + +     +           + V   P     S P      G  + L C +   P P
Sbjct: 537 CGIQNSVSANRSDPV-------TLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSP 589

Query: 154 VYTWSK 159
            Y+W  
Sbjct: 590 QYSWRI 595

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 72.7 bits (178), Expect = 3e-14
 Identities = 17/135 (12%), Positives = 31/135 (22%), Gaps = 18/135 (13%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             + G Y C         +    +               +  P R  N     V   E  
Sbjct: 60  FQNTGTYRCTEPGDPLGGSAAIHL--------------YVKDPARPWNVLAQEVVVFEDQ 105

Query: 357 FVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
              L C+     +    +  +          +Y  +      I       +  Y C A  
Sbjct: 106 DALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALM 165

Query: 416 GIGDPIRKEFNVIVR 430
           G    +     + V+
Sbjct: 166 GGRKVMSISIRLKVQ 180

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 60.0 bits (145), Expect = 5e-10
 Identities = 19/102 (18%), Positives = 27/102 (26%), Gaps = 7/102 (6%)

Query: 333 TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT- 391
              IP PP         V    G    + C A    +    + +   +            
Sbjct: 180 QKVIPGPPALTLVPAELV-RIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHN 238

Query: 392 ----LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                   L +  +  Q AG Y CVA+N  G          V
Sbjct: 239 NRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK-HSTSMFFRV 279

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 9/93 (9%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           S P     S P +  + G  VTLRC+  G    V  W                    +L 
Sbjct: 3   SIPVIEP-SVPELVVKPGATVTLRCVGNG---SV-EWDGPPSPHWTLYSDGS---SSILS 54

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
                 Q+ G Y C              ++ V+
Sbjct: 55  TNNATFQNTGTYRCTEPGDPL-GGSAAIHLYVK 86

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 4/71 (5%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C A   G   ++ S    +L+ +  +  PP         V    G    + C A    + 
Sbjct: 161 CSALMGGRKVMSISI---RLKVQKVIPGPPALTLVPAELV-RIRGEAAQIVCSASSVDVN 216

Query: 154 VYTWSKGEVSR 164
              + +   ++
Sbjct: 217 FDVFLQHNNTK 227

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ... Length = 184

 Score = 70.4 bits (172), Expect = 4e-14
 Identities = 11/84 (13%), Positives = 23/84 (27%), Gaps = 9/84 (10%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG 407
                 +G  +TL   +     P                   +     L +  L  QD+G
Sbjct: 105 SDTHLLQGQSLTLTLESPPGSSPSVQCRS--------PRGKNIQGGKTLSVSQLELQDSG 156

Query: 408 IYVCVAANGIGDPIRKEFNVIVRG 431
            + C         +  + +++V  
Sbjct: 157 TWTCTVLQNQK-KVEFKIDIVVLA 179

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ... Length = 184

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 19/101 (18%)

Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTL--------------- 392
            V  ++G+ V L C A       + W    ++ I G+ G +                   
Sbjct: 4   VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLW 63

Query: 393 ---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
              +  L I  L  +D+  Y+C   +   +     F +   
Sbjct: 64  DQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTAN 104

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ... Length = 184

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 6/49 (12%), Positives = 14/49 (28%)

Query: 112 QLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           ++E++        F   +       +G  +TL   +     P       
Sbjct: 86  EVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSP 134

>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 24/87 (27%), Positives = 28/87 (32%), Gaps = 7/87 (8%)

Query: 337 PSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
              P F    +    +  EG  VT  C   G P P   W K    I     HY +  D  
Sbjct: 6   SGAPFFE--MKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLD 63

Query: 395 ---VLQIVGLVRQDAGIYVCVAANGIG 418
               L        D G Y  +AAN  G
Sbjct: 64  GTCSLHTTASTLDDDGNYTIMAANPQG 90

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens} Length = 99

 Score = 67.3 bits (165), Expect = 4e-14
 Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 336 IPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
           I S P     +          +       A G P P   W+K   +I    G YKL+ D 
Sbjct: 3   ISSKPVI--VTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAI-TQGGKYKLSEDK 59

Query: 395 ---VLQIVGLVRQDAGIYVCVAANGIG 418
               L+I      D+G+Y C   N  G
Sbjct: 60  GGFFLEIHKTDTSDSGLYTCTVKNSAG 86

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens} Length = 99

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 10/68 (14%)

Query: 119 VASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEV----SRKFFLRGFIS 173
           ++S P     +          +       A G P P   W+K         K+ L     
Sbjct: 3   ISSKPVI--VTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKL---SE 57

Query: 174 ANDLCFLE 181
                FLE
Sbjct: 58  DKGGFFLE 65

>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr virus} Length = 201

 Score = 70.4 bits (172), Expect = 4e-14
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 19/120 (15%)

Query: 305 YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA 364
           Y C      T  T                 ++  P     +SE +    + + +T+ C  
Sbjct: 82  YLCRMKLGETEVTKQE------------HLSVVKPLTLSVHSERSQ-FPDFSVLTVTCTV 128

Query: 365 IGYPIPVYTWSKGEVSIDG---SDGHYKLTLDGVLQIV---GLVRQDAGIYVCVAANGIG 418
             +P P   W   E        ++G      DG L +     L +       CV  N   
Sbjct: 129 NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKE 188

>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr virus} Length = 201

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+ +  G T VT           ++V  P     +SE +    + + +T+ C    +P P
Sbjct: 84  CRMK-LGETEVTKQE-------HLSVVKPLTLSVHSERSQ-FPDFSVLTVTCTVNAFPHP 134

Query: 154 VYTWSKGE 161
              W   E
Sbjct: 135 HVQWLMPE 142

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 72.5 bits (178), Expect = 4e-14
 Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD--- 393
             P F    E   +     +  TL C   G+P P+  W +    I      Y++      
Sbjct: 3   MAPHF--KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60

Query: 394 -GVLQIVGLVRQDAGIYVCVAANGIG 418
              L I  +   DA +Y   A N  G
Sbjct: 61  YHQLIIASVTDDDATVYQVRATNQGG 86

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 19/143 (13%)

Query: 296 AKCCPNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEA 352
           A    +D   Y    +N     + T ++    P          I  P          V A
Sbjct: 67  ASVTDDDATVYQVRATNQGGSVSGTASLEVEVP--------AKIHLPKTLEGMG--AVHA 116

Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGI 408
             G  V+++    G P PV TW KG+  ID ++GHY++ +      ++   G+ R+DAG 
Sbjct: 117 LRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGF 175

Query: 409 YVCVAANGIGDPIRKEFNVIVRG 431
           YV  A N  G   +K   + V  
Sbjct: 176 YVVCAKNRFGI-DQKTVELDVAD 197

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 70.3 bits (172), Expect = 4e-14
 Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 9/104 (8%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSD 385
            S P    +   P F    EP            L C A G P PV   W +  V +  + 
Sbjct: 95  VSQPGYVGLEGLPYFL--EEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP 152

Query: 386 GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           GH        L + GL       + C A N  G    +   + V
Sbjct: 153 GHGP---QRSLHVPGL--NKTSSFSCEAHNAKGVTTSRTATITV 191

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 61.5 bits (149), Expect = 4e-11
 Identities = 21/106 (19%), Positives = 32/106 (30%), Gaps = 15/106 (14%)

Query: 339 PPRFHNYSEP-TVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSID-----------GSD 385
              F     P  +    G   TLRC   +    P   W +    ++           G D
Sbjct: 2   ESPFV--GNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGED 59

Query: 386 GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                 +   L+I  L   D G Y C+   G    + +   V + G
Sbjct: 60  EQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEG 105

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 46.0 bits (109), Expect = 8e-06
 Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 11/69 (15%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C       TFV+           + +   P F    EP            L C A G P 
Sbjct: 85  CLVFLGHQTFVSQPG-------YVGLEGLPYFL--EEPEDRTVAANTPFNLSCQAQGPPE 135

Query: 153 PV-YTWSKG 160
           PV   W + 
Sbjct: 136 PVDLLWLQD 144

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 73.3 bits (180), Expect = 4e-14
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDG--- 394
            P+F +       + EGN + + C     P     W + ++ +   +  + K    G   
Sbjct: 100 APKFISNQT-IYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKM 158

Query: 395 VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           +L+I      D G Y C A N IG    +E+ + +  
Sbjct: 159 ILEIAPTSDNDFGRYNCTATNHIGT-RFQEYILALAD 194

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---------LDGVLQI 398
                 E   VTL C A G PIP  TW +       ++G   L              L I
Sbjct: 8   KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHI 67

Query: 399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             +   D+G Y C AA+ IG   +K   + + 
Sbjct: 68  KDVKLSDSGRYDCEAASRIGG-HQKSMYLDIE 98

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 9/67 (13%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C+A    G     S         + +   P+F +       + EGN + + C     P  
Sbjct: 80  CEAASRIGG-HQKSM-------YLDIEYAPKFISNQT-IYYSWEGNPINISCDVKSNPPA 130

Query: 154 VYTWSKG 160
              W + 
Sbjct: 131 SIHWRRD 137

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A Length = 100

 Score = 67.5 bits (165), Expect = 4e-14
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 337 PSPPRFHNYSEP---TVEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDGSDGHYKLT 391
              P + N  +           N V  RC A G P+P   W K   E   +   G YK+ 
Sbjct: 2   KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 61

Query: 392 LD-GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                L +  +V  D G Y CV  N  G  I   +++ V
Sbjct: 62  NQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHLDV 99

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A Length = 100

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 3/43 (6%)

Query: 120 ASPPRFHNYSEP---TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
              P + N  +           N V  RC A G P+P   W K
Sbjct: 2   KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK 44

>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 67.8 bits (166), Expect = 5e-14
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
            P F     P  +  +EG    + C   G P P  +W      +   D  +K+ +     
Sbjct: 9   RPHFL--QAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVR-PDSAHKMLVRENGV 65

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIG 418
             L I  +  +DAGIY C+A N  G
Sbjct: 66  HSLIIEPVTSRDAGIYTCIATNRAG 90

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 70.4 bits (172), Expect = 5e-14
 Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 11/94 (11%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVS----------IDGSDGHYKLTLDGV 395
           SEP V   E N V L C   G+  P   W   +            I  S       L   
Sbjct: 10  SEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTG 69

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +    + R+D G Y C+ +   G     E  V +
Sbjct: 70  ITFKSVTREDTGTYTCMVSEEGG-NSYGEVKVKL 102

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 66.9 bits (163), Expect = 9e-13
 Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 11/92 (11%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTL----- 392
           PP     + P+  A  GN   L C    G P   YTW K  + +  +    +        
Sbjct: 107 PPSKPTVNIPS-SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYV 165

Query: 393 ----DGVLQIVGLVRQDAGIYVCVAANGIGDP 420
                G L    L   D G Y C A NG G P
Sbjct: 166 LNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 129 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
           SEP V   E N V L C   G+  P   W  
Sbjct: 10  SEPEVRIPENNPVKLSCAYSGFSSPRVEWKF 40

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPI 152
           C     GG              ++ V  PP     + P+  A  GN   L C    G P 
Sbjct: 85  CMVSEEGGNSYGEVKV------KLIVLVPPSKPTVNIPS-SATIGNRAVLTCSEQDGSPP 137

Query: 153 PVYTWSK 159
             YTW K
Sbjct: 138 SEYTWFK 144

>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 99

 Score = 67.0 bits (164), Expect = 6e-14
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 333 TPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT 391
           +  +   P F   S        EG    L+C   G P+P  TW      I  +    +  
Sbjct: 5   SSGMEVAPSF--SSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAG 62

Query: 392 LDGVLQIVGLVRQDAGIYVCVAANGIG 418
               L I   + +D G Y C+A N +G
Sbjct: 63  -VAELHIQDALPEDHGTYTCLAENALG 88

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X Length = 214

 Score = 69.7 bits (170), Expect = 1e-13
 Identities = 23/136 (16%), Positives = 36/136 (26%), Gaps = 20/136 (14%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G Y C       +      ++               PS  R           E GN
Sbjct: 93  LSDIGTYQCKVKKAPGVANKKFLLTVLVK-----------PSGTRCFV----DGSEEIGN 137

Query: 357 FVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN 415
              L+C    G     + W K   S              V+ +     + +G Y C   N
Sbjct: 138 DFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQN 197

Query: 416 GIGDPIRKEFNVIVRG 431
            +G   +    + V  
Sbjct: 198 RVGS-DQCMLRLDVVP 212

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X Length = 214

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 12/75 (16%), Positives = 18/75 (24%), Gaps = 2/75 (2%)

Query: 103 FVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGE 161
            V  +      +  + V   P            E GN   L+C    G     + W K  
Sbjct: 102 KVKKAPGVANKKFLLTVLVKPSGTRCFVD-GSEEIGNDFKLKCEPKEGSLPLQFEWQKLS 160

Query: 162 VSRKFFLRGFISAND 176
            S+            
Sbjct: 161 DSQTMPTPWLAEMTS 175

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X Length = 214

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 18/117 (15%), Positives = 27/117 (23%), Gaps = 31/117 (26%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVY----TWSKGEVSIDGSD---------------- 385
            E  +E  +G    L C     P         W          D                
Sbjct: 6   PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYY 65

Query: 386 ----------GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK-EFNVIVRG 431
                      +   + D  + +  L   D G Y C      G   +K    V+V+ 
Sbjct: 66  PDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKP 122

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 69.2 bits (169), Expect = 1e-13
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 11/94 (11%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVS----------IDGSDGHYK 389
              +  ++  V+  E   + L C   G+  P   W   + S          I        
Sbjct: 2   GSVYT-AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60

Query: 390 LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK 423
                 +    + R+D G Y C+ +   G    +
Sbjct: 61  TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGE 94

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 66.9 bits (163), Expect = 8e-13
 Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 12/93 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTL----- 392
           PP     S P+     GN   L C    G P   Y+W K  +S+  +D            
Sbjct: 104 PPSKPTISVPS-SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSF 162

Query: 393 -----DGVLQIVGLVRQDAGIYVCVAANGIGDP 420
                 G L    +   D+G Y C A NG G  
Sbjct: 163 TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 123 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE 161
              +  ++  V+  E   + L C   G+  P   W   +
Sbjct: 2   GSVYT-AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQ 39

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 17/67 (25%), Positives = 21/67 (31%), Gaps = 8/67 (11%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPI 152
           C     GG      +        + V  PP     S P+     GN   L C    G P 
Sbjct: 82  CMVSEEGGQNYGEVSI------HLTVLVPPSKPTISVPS-SVTIGNRAVLTCSEHDGSPP 134

Query: 153 PVYTWSK 159
             Y+W K
Sbjct: 135 SEYSWFK 141

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens} Length = 207

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 28/132 (21%), Positives = 37/132 (28%), Gaps = 11/132 (8%)

Query: 296 AKCCPNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIP-------SPPRFHNYSE 347
            K    D G Y+        T  +TV     V+                   P F  Y  
Sbjct: 66  EKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS 125

Query: 348 PTVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
             V       V L+C            W K E  I   + H        L I    ++DA
Sbjct: 126 WEVT--GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDA 183

Query: 407 GIYVCVAANGIG 418
           GIY  +  +  G
Sbjct: 184 GIYEVILKDDRG 195

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens} Length = 207

 Score = 54.2 bits (130), Expect = 2e-08
 Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 7/75 (9%)

Query: 350 VEAEEGNFVTL-RCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-----LQIVGLVR 403
           VE  E   V                +   E  I      YK+ +D       + +  L  
Sbjct: 12  VEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIF-EGPKYKMHIDRNTGIIEMFMEKLQD 70

Query: 404 QDAGIYVCVAANGIG 418
           +D G Y     +G  
Sbjct: 71  EDEGTYTFQLQDGKA 85

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 68.3 bits (167), Expect = 2e-13
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 9/89 (10%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI----DGSDGHYKLTLD 393
           + P    +        EG    + C ++GYP P + W K E  +      S G + +   
Sbjct: 91  AAPDITGHKRS-ENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINK 149

Query: 394 G---VLQIVGL-VRQDAGIYVCVAANGIG 418
                L IV L + +D G Y C A N IG
Sbjct: 150 ENYTELNIVNLQITEDPGEYECNATNSIG 178

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 63.3 bits (154), Expect = 9e-12
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYT--WSKGEVSIDGSDGHYKLTLDGV 395
           + PR     E  +  +    VTL+C        +    W+K  V +  +  +     +  
Sbjct: 2   NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNAS---NME 57

Query: 396 LQIVGLVRQDAGIYVCVAANG 416
            +I     +D+G Y CV    
Sbjct: 58  YRINKPRAEDSGEYHCVYHFV 78

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 10/66 (15%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
           C           ++A        I V + P    +        EG    + C ++GYP P
Sbjct: 73  CVYHFVSA--PKANA-------TIEVKAAPDITGHKRS-ENKNEGQDAMMYCKSVGYPHP 122

Query: 154 VYTWSK 159
            + W K
Sbjct: 123 EWMWRK 128

>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4 Length = 99

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
             P+     +      +G+    R   +G P P   W K  V I+ SD  Y    +    
Sbjct: 4   EAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVC 62

Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
            L I  +  +D+   +  A N  G
Sbjct: 63  ELVIRDVTGEDSASIMVKAINIAG 86

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 69.2 bits (169), Expect = 5e-13
 Identities = 25/144 (17%), Positives = 39/144 (27%), Gaps = 12/144 (8%)

Query: 297 KCCPNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTP-----YTPNIPSPPRFHNYSEP 348
           K    D G Y+    +      +T  +                        P F  Y   
Sbjct: 172 KLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSW 231

Query: 349 TVEAEEGNFVTLRCIAIGYPIPVY-TWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG 407
            V       V L+C         +  W K E  I   + H        L I    ++DAG
Sbjct: 232 EVT--GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAG 289

Query: 408 IYVCVAANGIGDPIRKEFNVIVRG 431
           IY  +  +  G   +    ++   
Sbjct: 290 IYEVILKDDRGK-DKSRLKLVDEA 312

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 68.9 bits (168), Expect = 7e-13
 Identities = 19/130 (14%), Positives = 34/130 (26%), Gaps = 11/130 (8%)

Query: 297 KCCPNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAE 353
               +D G YSC  ++   I ++            +  +      P             E
Sbjct: 64  DLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEH--KFPTVPVKSELAVEILE 121

Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-----VLQIVGLVRQDAGI 408
           +G                  +   E  I      YK+ +D       + +  L  +D G 
Sbjct: 122 KGQVRFWMQAEKLSGNAKVNYIFNEKEIF-EGPKYKMHIDRNTGIIEMFMEKLQDEDEGT 180

Query: 409 YVCVAANGIG 418
           Y     +G  
Sbjct: 181 YTFQLQDGKA 190

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 63.1 bits (153), Expect = 6e-11
 Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 6/83 (7%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---V 395
            P         V+ +    +   C     P   ++WSK  VS +      ++   G    
Sbjct: 3   DPFTKE-VVVNVDDDGVISLNFEC-DKMTPKSEFSWSKDYVSTE-DSPRLEVESKGNKTK 59

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
           +    L   D GIY C   +  G
Sbjct: 60  MTFKDLGMDDLGIYSCDVTDTDG 82

>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1 Length = 122

 Score = 64.9 bits (158), Expect = 6e-13
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVY-TWSKGEVSID-GSDGHYKLT----- 391
           PP     S  T  A  G    ++C     P P    WS  E  ++ G+ G Y +      
Sbjct: 14  PPIIS--STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTE 71

Query: 392 --LDGVLQIVGLVRQD-AGIYVCVAANGIGDPIRKEFNVIVRGN 432
             +   L I  +VR D   IY C A N  G    +   +  +G+
Sbjct: 72  EGVISTLTISNIVRADFQTIYNCTAWNSFGS-DTEIIRLKEQGS 114

>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1 Length = 122

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 3/47 (6%)

Query: 116 RIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVY-TWSKGE 161
            + V  PP     S  T  A  G    ++C     P P    WS  E
Sbjct: 8   TLTVNGPPIIS--STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKE 52

>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A Length = 154

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 23/118 (19%), Positives = 34/118 (28%), Gaps = 14/118 (11%)

Query: 305 YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA 364
            S  N   +      +             P               +E  EG+     C  
Sbjct: 15  TSPINANKVENEDAFLEEVAEEKPHVK--PYFTKTIL-------DMEVVEGSAARFDCKV 65

Query: 365 IGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGIYVCVAANGIG 418
            GYP P   W K +  +     H+++  D      L I  +   D   Y C A N +G
Sbjct: 66  EGYPDPEVMWFKDDNPVK-ESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLG 122

>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus, picornavirus, virus/receptor complex; 15.00A {Homo sapiens} SCOP: i.6.1.1 PDB: 1dgi_R Length = 302

 Score = 67.8 bits (165), Expect = 1e-12
 Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 6/109 (5%)

Query: 322 PAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVS 380
            ++           +  PP               N  TL C A   P P  Y WS     
Sbjct: 199 ESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGP 258

Query: 381 IDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +      + +     L I  + +      +C   N +G   + E  V V
Sbjct: 259 LP----PFAVAQGAQLLIRPVDKPINTTLICNVTNALGA-RQAELTVQV 302

>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus, picornavirus, virus/receptor complex; 15.00A {Homo sapiens} SCOP: i.6.1.1 PDB: 1dgi_R Length = 302

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 8/109 (7%)

Query: 329 STPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGH 387
           S      + + P+        V+         RC++  G P    TW      +  +   
Sbjct: 107 SVDIWLRVLAKPQNT-AEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQV 165

Query: 388 YK-----LTLDGVLQIVGLVRQDAGIYVCVAAN-GIGDPIRKEFNVIVR 430
                  +T+  +  +V   + D     C   +     P     N+ V 
Sbjct: 166 PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY 214

>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus, picornavirus, virus/receptor complex; 15.00A {Homo sapiens} SCOP: i.6.1.1 PDB: 1dgi_R Length = 302

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 25/107 (23%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVY-----TWSKGEVSIDGSDGHYKL------------ 390
             V    G+ VTL C      + V      TW++   S   +  H               
Sbjct: 8   TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEF 67

Query: 391 --------TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                     +  L++ GL  +D G Y C+           +  + V
Sbjct: 68  VAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114

>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X Length = 103

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 15/98 (15%), Positives = 24/98 (24%), Gaps = 12/98 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY-------KLT 391
            P               +   +     G P P   W      ++ S              
Sbjct: 4   APTI----TFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTE 59

Query: 392 LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             G LQ+      + G Y  +A N  G    K+ +   
Sbjct: 60  YHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQISAHF 96

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 69.0 bits (168), Expect = 2e-12
 Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 305 YSCSNL-FDITTTTTTVSPAYPVYTSTPYTPNI---PSPPRFHNYSEPTVEAEEGNFVTL 360
             C  +      ++   S +YP+ + +P        P       Y    VE +    +TL
Sbjct: 10  IKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGT-VYEAAAVEVDVSASITL 68

Query: 361 RCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV--LQIVGLVRQDAGIYVCVAANGIG 418
           + +          W     S++    H+ L   GV  + I+ +    AG Y+    +   
Sbjct: 69  QVLVDAPGNISCLWVFKHSSLNCQP-HFDLQNRGVVSMVILKMTETQAGEYLLFIQSEAT 127

Query: 419 DPIRKEFNVIVR 430
           +     F V +R
Sbjct: 128 N-YTILFTVSIR 138

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 68.2 bits (166), Expect = 3e-12
 Identities = 23/134 (17%), Positives = 36/134 (26%), Gaps = 22/134 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            ND G Y+C  S     +   T V   +   T++                    E ++  
Sbjct: 299 RNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSS----------------EDYEIDQYE 342

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG 416
                     YP    TW+    S         L     +      +   G Y+  A N 
Sbjct: 343 EFCFSVRFKAYPQIRCTWTFSRKSF--PCEQKGLDNGYSISKFCNHKHQPGEYIFHAEND 400

Query: 417 IGDPIRKEFNVIVR 430
                 K F + +R
Sbjct: 401 DAQ-FTKMFTLNIR 413

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 59.7 bits (144), Expect = 2e-09
 Identities = 15/114 (13%), Positives = 39/114 (34%), Gaps = 14/114 (12%)

Query: 327 YTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSD 385
             +  +T ++   P+    + P +  + G  + +RC A+        TW     +++  +
Sbjct: 217 ECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGN 273

Query: 386 --------GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                    +  +       +  + R D G Y C ++            ++ +G
Sbjct: 274 YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSA--LVTIVEKG 325

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
            +  +T +I +   +        + E  N   L CI+   P P+  W   +   +     
Sbjct: 129 YTILFTVSIRNTLLYTLRRPYFRKME--NQDALVCISESVPEPIVEWVLCDSQGESCKEE 186

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
               +    +++           C A N +G    + F + +  
Sbjct: 187 SPAVVKKEEKVLH--ELFGTDIRCCARNELGRECTRLFTIDLNQ 228

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 22/148 (14%), Positives = 34/148 (22%), Gaps = 40/148 (27%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +  G Y     N     T   T+              NI   P+            E +
Sbjct: 387 KHQPGEYIFHAENDDAQFTKMFTL--------------NIRRKPQVL---------AEAS 423

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-------------LDGVLQIVGLVR 403
                C + GYP+P +TW K                                  +     
Sbjct: 424 ASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEA 483

Query: 404 QDAGIYVCVAANGIGDPIRKEFNVIVRG 431
               +  C A N +G    +   +   G
Sbjct: 484 IKGFLVKCCAYNSLG-TSCETILLNSPG 510

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 45.1 bits (106), Expect = 6e-05
 Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 100 GGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
             ++   S +P+ L   +   S    +      VE +    +TL+ +          W  
Sbjct: 27  SSSYPMVSESPEDLGCALRPQSSGTVY--EAAAVEVDVSASITLQVLVDAPGNISCLWVF 84

>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens} Length = 103

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 15/86 (17%), Positives = 20/86 (23%), Gaps = 5/86 (5%)

Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
           +   PR             G            P     W    V +         T    
Sbjct: 5   LDHAPRITLRMRS-HRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQ-ESSKIHYTNTSG 62

Query: 395 --VLQIVGLVRQDAGIYVCVAANGIG 418
              L+I+     D+G Y  V  N  G
Sbjct: 63  VLTLEILDCHTDDSGTYRAVCTNYKG 88

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 30/142 (21%), Positives = 44/142 (30%), Gaps = 24/142 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            ND G + C  +N F     TTT+     V         I   P  +     TV   +G 
Sbjct: 282 VNDSGVFMCYANNTFGSANVTTTLE----VVDK----GFINIFPMIN----TTVFVNDGE 329

Query: 357 FVTLRCIAIGYPIPV-YTWSKGEVSI-------DGSDGHYKLTLDGVLQIVGLVRQDAGI 408
            V L      +P P    W     +          S+    +     L +  L   + G 
Sbjct: 330 NVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGT 389

Query: 409 YVCVAANGIGDPIRKEFNVIVR 430
           Y  + +N   +     FNV V 
Sbjct: 390 YTFLVSNSDVN-AAIAFNVYVN 410

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 63.5 bits (154), Expect = 8e-11
 Identities = 21/107 (19%), Positives = 33/107 (30%), Gaps = 10/107 (9%)

Query: 332 YTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVY-TWSKGEVSIDGSD----- 385
             P   + P     S+ +    EG   T+ C        VY TW +        +     
Sbjct: 204 VRPAFKAVPVVSV-SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSW 262

Query: 386 --GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             G +       L I      D+G+++C A N  G        + V 
Sbjct: 263 HHGDFNYERQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVV 308

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 18/133 (13%), Positives = 39/133 (29%), Gaps = 18/133 (13%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
             + G Y+C+N   ++ +         V+   P    +             +  +E N  
Sbjct: 89  ATNTGKYTCTNKHGLSNSIY-------VFVRDPAKLFLVDRS---------LYGKEDNDT 132

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVR-QDAGIYVCVAANGI 417
            +RC      +  Y+    +      D  +       + I  + R        C      
Sbjct: 133 LVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEG 192

Query: 418 GDPIRKEFNVIVR 430
              + ++F + VR
Sbjct: 193 KSVLSEKFILKVR 205

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 57.8 bits (139), Expect = 6e-09
 Identities = 20/112 (17%), Positives = 31/112 (27%), Gaps = 22/112 (19%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--------- 385
            + + P         +  +      L+C+A G+P P   W     +              
Sbjct: 408 YVNTKPEI-------LTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQ 460

Query: 386 -----GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGN 432
                G     L     I     +  G   C A N +G      FN   +GN
Sbjct: 461 TLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGK-TSAYFNFAFKGN 511

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 19/114 (16%)

Query: 305 YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA 364
           + C  L  +   T +  P+         +P  PSPP   +  +  +    G+ + L C  
Sbjct: 10  FLCVLLLLLRVQTGSSQPSV--------SPGEPSPPSI-HPGKSDLIVRVGDEIRLLCTD 60

Query: 365 IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
            G+      W+   +     +                   + G Y C   +G+ 
Sbjct: 61  PGFV----KWTFEILDETNENKQ------NEWITEKAEATNTGKYTCTNKHGLS 104

>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDGSDGHYKLTLDGV 395
              R  +     V  +EG+ V   C A G P P   W      +    S+G   +  DG 
Sbjct: 383 RRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGT 442

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
           L++     QD G Y+C+AAN  G
Sbjct: 443 LEVRYAQVQDNGTYLCIAANAGG 465

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus} Length = 290

 Score = 66.3 bits (161), Expect = 4e-12
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 18/135 (13%)

Query: 299 CPNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNF 357
                G Y+CSN   +T++         V+   P    +   P         +  +E + 
Sbjct: 65  EATRTGTYTCSNSNGLTSSIY-------VFVRDPAKLFLVGLP---------LFGKEDSD 108

Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ-DAGIYVCVAANG 416
             +RC      +  Y+  + +     +D  +       + I  + R        C A   
Sbjct: 109 ALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRD 168

Query: 417 IGDPIRKEFNVIVRG 431
                  +F + VR 
Sbjct: 169 GTWLHSDKFTLKVRE 183

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus} Length = 290

 Score = 55.9 bits (134), Expect = 1e-08
 Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 12/108 (11%)

Query: 332 YTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSID-------- 382
               I + P         +  ++G+  T+ C        V   W K              
Sbjct: 181 VREAIKAIPVVSVPETSHL-LKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHN 239

Query: 383 -GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
               G +       L I      D+G+++C A N  G        + V
Sbjct: 240 SWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS-ANVTTTLKV 286

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus} Length = 290

 Score = 45.9 bits (108), Expect = 2e-05
 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 11/91 (12%)

Query: 329 STPY-TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
           S P  +P  PSPP   + ++  +  E G+ ++L CI       V  W+            
Sbjct: 1   SQPSASPGEPSPPSI-HPAQSELIVEAGDTLSLTCIDPD---FV-RWTF-----KTYFNE 50

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                              G Y C  +NG+ 
Sbjct: 51  MVENKKNEWIQEKAEATRTGTYTCSNSNGLT 81

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae} Length = 250

 Score = 65.3 bits (158), Expect = 5e-12
 Identities = 30/154 (19%), Positives = 44/154 (28%), Gaps = 29/154 (18%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
           P D G Y C        T   +     V   T +TP        H  +   V+ +EGN +
Sbjct: 99  PQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTP----SNNVHVSTAEVVQVDEGNDI 154

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSD-----------------------GHYKLTLDGV 395
           T+ C          TW  G    +  +                       G    +    
Sbjct: 155 TMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARN 214

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           L I      DAG   C  A G G  +  + +  +
Sbjct: 215 LVIRAAKITDAGRVWCELATGQG-ELDADRSSTI 247

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae} Length = 250

 Score = 43.4 bits (101), Expect = 9e-05
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 94  CQA-RCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPI 152
           CQ  + +  T     A    L+      S     + +E  V+ +EGN +T+ C       
Sbjct: 107 CQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAE-VVQVDEGNDITMTCPCTDCAN 165

Query: 153 PVYTWSKG 160
              TW  G
Sbjct: 166 ANVTWYTG 173

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae} Length = 250

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 22/106 (20%), Positives = 31/106 (29%), Gaps = 34/106 (32%)

Query: 347 EPTVEAEEGNFVTLRC---IAIGYPIPVYTWSKGEVSIDGS---DGHYKLTLDGV----- 395
              VE   G  V L C   +A     PV +W KG      +    G+Y    +G+     
Sbjct: 9   HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVES 68

Query: 396 -----------------------LQIVGLVRQDAGIYVCVAANGIG 418
                                  L++  +  QD G Y C  A    
Sbjct: 69  DSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSI 114

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4 Length = 118

 Score = 61.8 bits (150), Expect = 6e-12
 Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY------ 388
            +  PPR  +  EP +  E      +  +  G P P   W      +  S   +      
Sbjct: 4   TVYYPPRVVSLEEPELRLE----HCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQE 59

Query: 389 KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
               +G L        + G Y  +A N +G    +  N   
Sbjct: 60  GEISEGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHF 99

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 64.1 bits (156), Expect = 7e-12
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDG--- 394
            P+        V   EGN V + C    YP    +W +    +   +  + K+       
Sbjct: 19  APKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSAS 76

Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
            L++      D G Y C A N IG
Sbjct: 77  YLEVTPDSENDFGNYNCTAVNRIG 100

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A* Length = 265

 Score = 65.1 bits (158), Expect = 7e-12
 Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 13/107 (12%)

Query: 326 VYTSTPYTPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS 384
           ++ +      +   PR      P      E +  T  C A G P+P     K     DG+
Sbjct: 170 IHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK-----DGT 224

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                    G    V   R   G Y+C A +  G+ + +E  V V  
Sbjct: 225 ----FPLPIGESVTVT--RDLEGTYLCRARSTQGE-VTREVTVNVLS 264

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A* Length = 265

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 15/67 (22%), Positives = 19/67 (28%), Gaps = 5/67 (7%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPI 152
           C A       +       +L     V   PR      P      E +  T  C A G P+
Sbjct: 159 CSATLEVAGQLIHKNQTRELR----VLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPL 214

Query: 153 PVYTWSK 159
           P     K
Sbjct: 215 PELKCLK 221

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A* Length = 208

 Score = 63.5 bits (154), Expect = 1e-11
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
           T      ++  P             +E + VTL C++         W     S+  ++  
Sbjct: 98  TQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTE-R 155

Query: 388 YKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             L+ +  +L+I  + R+DAG Y C  +N +         + +
Sbjct: 156 MTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 198

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A* Length = 208

 Score = 52.0 bits (124), Expect = 1e-07
 Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 19/102 (18%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD------------------GH 387
           + P  +  E N V L    +   +  + W KG  +    +                  G 
Sbjct: 6   AVPP-QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGR 64

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             +  +G L    +  +D G+Y     +      +      V
Sbjct: 65  EIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106

>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A Length = 100

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 5/81 (6%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
           S   F    +P  + ++G  V      +  P     W K    I  S   Y     G   
Sbjct: 6   SGAAFAKILDPAYQVDKGGRVRFVVE-LADPKLEVKWYKNGQEIRPST-KYIFEHKGCQR 63

Query: 395 VLQIVGLVRQDAGIYVCVAAN 415
           +L I      D   Y   A +
Sbjct: 64  ILFINNCQMTDDSEYYVTAGD 84

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 184

 Score = 62.7 bits (152), Expect = 1e-11
 Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 12/108 (11%)

Query: 333 TPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSID-----GSDG 386
              +  PPR            EG    L C +   P    + W K   S D     GS+ 
Sbjct: 77  NIQLHGPPRVKAVKSS-EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSES 135

Query: 387 HYKLTLDG---VLQIVGLVRQ-DAGIYVCVAANGIGDPIRKEFNVIVR 430
            + ++       L I  L  + D G Y C   +  G   +    + VR
Sbjct: 136 RFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD-QAIITLRVR 182

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 184

 Score = 49.3 bits (117), Expect = 5e-07
 Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 7/69 (10%)

Query: 349 TVEAEEGNFVTLRCIAIGYPIPV--YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
           T   + G+ + L C        V  + W KG V +               +         
Sbjct: 7   TTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA-----LPGQKTEFKVDSDDQW 61

Query: 407 GIYVCVAAN 415
           G Y CV   
Sbjct: 62  GEYSCVFLP 70

>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 104

 Score = 60.1 bits (146), Expect = 2e-11
 Identities = 18/97 (18%), Positives = 26/97 (26%), Gaps = 9/97 (9%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
                F    EP  +  +G+ + L    +        W K    I  S   Y     G  
Sbjct: 13  KKSTAFQKKLEPAYQVSKGHKIRLTVE-LADHDAEVKWLKNGQEIQMSGSKYIFESIGAK 71

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             L I      D   Y CV         +    + V+
Sbjct: 72  RTLTISQCSLADDAAYQCVVGG-----EKCSTELFVK 103

>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 103

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---V 395
           P       E       G  V LRC       PV  W K   +I  S   Y +  +G   +
Sbjct: 8   PAAIIKPLED-QWVAPGEDVELRCELSRAGTPV-HWLKDRKAIRKSQ-KYDVVCEGTMAM 64

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
           L I G   +DAG Y C       
Sbjct: 65  LVIRGASLKDAGEYTCEVEASKS 87

>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens} Length = 97

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVY-TWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQD 405
              EEG  V   C    Y      TW  G   ++ S+  Y++T +    +L +  + + D
Sbjct: 11  AVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSE-KYEITYEDGVAILYVKDITKLD 69

Query: 406 AGIYVCVAANGIG 418
            G Y C   N  G
Sbjct: 70  DGTYRCKVVNDYG 82

>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 115

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 337 PSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
                     +   V+ +EG+  T RC           W   +  +  ++ +      G 
Sbjct: 11  GRRVHII--EDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGG 68

Query: 395 --VLQIVGLVRQDAGIYVCVA 413
             VL +  L  +D+G     A
Sbjct: 69  YHVLTLRQLALKDSGTIYFEA 89

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A Length = 170

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 24/133 (18%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
            ND G Y+C       T  T++S   PV+ +  +   +   P         +E +EG  +
Sbjct: 60  NNDSGEYTC------QTGQTSLSD--PVHLTVLFEWLVLQTP--------HLEFQEGETI 103

Query: 359 TLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
            LRC +    P+   T+ +   S   S        D    I       +G Y C    G 
Sbjct: 104 MLRCHSWKDKPLVKVTFFQNGKSQKFSHL------DPTFSIPQANHSHSGDYHCTGNIGY 157

Query: 418 GDPIRKEFNVIVR 430
                K   + V+
Sbjct: 158 TLFSSKPVTITVQ 170

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A Length = 170

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 16/88 (18%), Positives = 23/88 (26%), Gaps = 11/88 (12%)

Query: 338 SPPRFH-NYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGV 395
           +PP+       P +   + + VTL C     P      W      I              
Sbjct: 1   APPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQP-------- 52

Query: 396 LQIVGLVRQDAGIYVCVAANGIG-DPIR 422
                    D+G Y C        DP+ 
Sbjct: 53  SYRFKANNNDSGEYTCQTGQTSLSDPVH 80

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A* Length = 176

 Score = 60.7 bits (147), Expect = 5e-11
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 327 YTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSD 385
             S P    + S       S   V   EG  + LRC     + +    + K   ++    
Sbjct: 74  NESEPVYLEVFSDWLLLQASAEVVM--EGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY 131

Query: 386 GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
                  +  + I     +D+G Y C       D   +  N+ V 
Sbjct: 132 E------NHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A* Length = 176

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 10/77 (12%)

Query: 348 PTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
           P     +G  VTL C     + +    W          +G      +  L IV    +D+
Sbjct: 12  PWNRIFKGENVTLTCNGNNFFEVSSTKWFH--------NGSLSEETNSSLNIVNAKFEDS 63

Query: 407 GIYVCVAANGIG-DPIR 422
           G Y C        +P+ 
Sbjct: 64  GEYKCQHQQVNESEPVY 80

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A Length = 331

 Score = 63.2 bits (153), Expect = 7e-11
 Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 5/104 (4%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDG 386
                T N+   P             +   V L C A   P    Y W+    S+     
Sbjct: 220 FKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSL---PK 276

Query: 387 HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             +     +     +    AG Y+C A N IG     +  V + 
Sbjct: 277 GVEAQNRTLFFKGPINYSLAGTYICEATNPIGTR-SGQVEVNIT 319

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A Length = 331

 Score = 46.7 bits (110), Expect = 1e-05
 Identities = 11/105 (10%), Positives = 32/105 (30%), Gaps = 10/105 (9%)

Query: 335 NIPSPPRFHNYSEPTV----EAEEGNFVTLRCIAI-GYPIPVYTWSKG----EVSIDGSD 385
            + + P         V    + ++   +   C +  G P  V +W           +  +
Sbjct: 126 TVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRN 185

Query: 386 GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            +  +T+    ++V           C+    +    ++   + V+
Sbjct: 186 PNGTVTVISRYRLVPSREAHQQSLACIVNYHMD-RFKESLTLNVQ 229

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A Length = 331

 Score = 44.7 bits (105), Expect = 5e-05
 Identities = 18/119 (15%), Positives = 33/119 (27%), Gaps = 24/119 (20%)

Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYP--------------------IPVYTW 374
            +   P        ++    G  V L C                          + +Y  
Sbjct: 9   QMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNP 68

Query: 375 SKGEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           S G   +       +       DG +++  L  +D G+Y+C  A         + N+ V
Sbjct: 69  SMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTV 127

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A Length = 331

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 14/58 (24%), Gaps = 1/58 (1%)

Query: 104 VTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV-YTWSKG 160
           V       +    + V   P             +   V L C A   P    Y W+  
Sbjct: 213 VNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTL 270

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 62.8 bits (152), Expect = 8e-11
 Identities = 28/137 (20%), Positives = 42/137 (30%), Gaps = 23/137 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
               G Y+C  S  +       T      V        N P+ P   + +  T+E + G+
Sbjct: 171 EKHRGNYTCHASYTYLGKQYPITR-----VIEFITLEENKPTRPVIVSPANETMEVDLGS 225

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSD--------------GHYKLTLDGVLQIVGLV 402
            + L C   G    +  W      ID  D                 + TL  VL I  + 
Sbjct: 226 QIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIE 285

Query: 403 RQD-AGIYVCVAANGIG 418
            +     + C A N  G
Sbjct: 286 SRFYKHPFTCFAKNTHG 302

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 57.8 bits (139), Expect = 3e-09
 Identities = 18/118 (15%), Positives = 29/118 (24%), Gaps = 5/118 (4%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPV-YTWSK--GEVSIDGSDGHYKLTLDG 394
             +     E   + +         C           TW K   +  +             
Sbjct: 3   ADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKE 62

Query: 395 VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGG 452
            L  V    +D+G Y CV  N     +R + +     N     Y+      Q     G
Sbjct: 63  KLWFVPAKVEDSGHYYCVVRNSSYC-LRIKISAKFVENEPNLCYNAQAIFKQKLPVAG 119

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 57.0 bits (137), Expect = 6e-09
 Identities = 21/144 (14%), Positives = 34/144 (23%), Gaps = 24/144 (16%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C   N         +         + P                   +     
Sbjct: 71  VEDSGHYYCVVRNSSYCLRIKISAK----FVENEPNLCYNAQAIF-------KQKLPVAG 119

Query: 357 FVTLRC------IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
              L C            +P   W K    +   + H+       L ++ +  +  G Y 
Sbjct: 120 DGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV-KDRLIVMNVAEKHRGNYT 178

Query: 411 CVAAN---GIGDPIRKEFNVIVRG 431
           C A+    G   PI +    I   
Sbjct: 179 CHASYTYLGKQYPITRVIEFITLE 202

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 1/69 (1%)

Query: 94  CQAR-CAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPI 152
           C A     G     +   + +       + P   + +  T+E + G+ + L C   G   
Sbjct: 179 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS 238

Query: 153 PVYTWSKGE 161
            +  W    
Sbjct: 239 DIAYWKWNG 247

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus} Length = 329

 Score = 62.2 bits (150), Expect = 1e-10
 Identities = 24/143 (16%), Positives = 37/143 (25%), Gaps = 18/143 (12%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
             D G Y C     +      +     V      T       RF    +P +    G   
Sbjct: 191 LEDSGRYDCY----VHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPA 246

Query: 359 TLRCIAIGYPIP----VYTWSKGEVSIDGSDGHYKLTL-------DGVLQIVGLVRQDAG 407
            + C A+   +     +  W      I G D      L       +  L    +  +  G
Sbjct: 247 NITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIG 306

Query: 408 -IYVCVAANGIGDPIRKEFNVIV 429
             Y C   N   D       V++
Sbjct: 307 NTYTCRGHNYYFD-KTLTTTVVL 328

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus} Length = 329

 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 15/81 (18%), Positives = 23/81 (28%), Gaps = 3/81 (3%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRC-IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           PP     +   +   +   + L C I         TW K    +      Y  +    L 
Sbjct: 128 PPSCIPETYE-LGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLI 185

Query: 398 IVGLVRQDAGIYVCVAANGIG 418
           I     +D+G Y C       
Sbjct: 186 IHNPELEDSGRYDCYVHYDDV 206

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus} Length = 329

 Score = 51.8 bits (123), Expect = 3e-07
 Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 7/111 (6%)

Query: 327 YTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG 386
             + P   +    P           A  G   + +C  I   +  + ++  +  ++    
Sbjct: 16  RDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKI 75

Query: 387 HYKL------TLDGVLQIVGLVRQDAG-IYVCVAANGIGDPIRKEFNVIVR 430
                       +G L I      D+   Y+C      GD ++      +R
Sbjct: 76  GKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIR 126

>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 4/89 (4%)

Query: 343 HNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWS-KGEVSIDGSDGHYKLTLDGVLQIVGL 401
             Y E   EA  G+ +T+RC      +     S   E  +           +G L    +
Sbjct: 249 SEYKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKV 308

Query: 402 VRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
             +D G+Y C A         +  +V ++
Sbjct: 309 QVEDGGVYTCYAMGETF---NETLSVELK 334

>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A Length = 103

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
           P RF        +E  EG   TLRC+      PV  W  G   +   D  Y L  +G   
Sbjct: 8   PVRFQ--EALKDLEVLEGGAATLRCVLSSVAAPV-KWCYGNNVLRPGD-KYSLRQEGAML 63

Query: 395 VLQIVGLVRQDAGIYVCVA 413
            L +  L  QD+G Y C  
Sbjct: 64  ELVVRNLRPQDSGRYSCSF 82

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 60.5 bits (146), Expect = 3e-10
 Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 9/112 (8%)

Query: 327 YTSTPYTPNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSK-------GE 378
             S  Y          +           +G  +TL CI IG  +  + W+          
Sbjct: 167 VDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLV 226

Query: 379 VSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR-KEFNVIV 429
             +          +  +L I     +D+G Y C     + D    K  N+ V
Sbjct: 227 EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITV 278

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 22/134 (16%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
             D G Y C++       T      Y ++   P    +P+        E  +   E   +
Sbjct: 60  GLDTGEYFCTHNDSRGLETDERKRLY-IFVPDPTVGFLPNDA-----EELFIFLTEITEI 113

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
           T+ C     P  V T  +        D    +  D      G+   +   Y+C    G  
Sbjct: 114 TIPCRVTD-PQLVVTLHE-----KKGDVALPVPYDHQRGFSGI--FEDRSYICKTTIGDR 165

Query: 419 DPIRKEFNVIVRGN 432
           +     + V     
Sbjct: 166 EVDSDAYYVYRLQV 179

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 5/85 (5%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQ 404
             P +     +   L C       PV  W +  +            T   VL +  L   
Sbjct: 6   PGPELVLNVSSTFVLTCSGSA---PV-VWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGL 61

Query: 405 DAGIYVCVAANGIGDPIRKEFNVIV 429
           D G Y C   +  G    +   + +
Sbjct: 62  DTGEYFCTHNDSRGLETDERKRLYI 86

>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A Length = 93

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 14/84 (16%), Positives = 22/84 (26%), Gaps = 10/84 (11%)

Query: 337 PSPPRFHNYSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
            +        +P   VE   G         +  P     W      +  S    ++  DG
Sbjct: 3   MALIEV---EKPLYGVEVFVGETAHFEIE-LSEPDVHGQWKLKGQPLAASP-DCEIIEDG 57

Query: 395 ---VLQIVGLVRQDAGIYVCVAAN 415
              +L +        G     AAN
Sbjct: 58  KKHILILHNCQLGMTGEVSFQAAN 81

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4 Length = 450

 Score = 61.4 bits (148), Expect = 4e-10
 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 13/107 (12%)

Query: 326 VYTSTPYTPNIPSPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS 384
           ++ +      +   PR      P      E +  T  C A G P+P     K        
Sbjct: 355 IHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK-------- 406

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           DG + L + G    V   R   G Y+C A +  G+ + +E  V V  
Sbjct: 407 DGTFPLPI-GESVTVT--RDLEGTYLCRARSTQGE-VTREVTVNVLS 449

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4 Length = 450

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 47/334 (14%), Positives = 78/334 (23%), Gaps = 56/334 (16%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIG-YPI 152
           C + C  G     +         + V   P     +        G  +TLRC   G  P 
Sbjct: 65  CYSNCPDGQSTAKT--------FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPR 116

Query: 153 P--VYTWSKG--EVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFITMP--- 205
                   +G  E+ R+  +           +  +         A +  R      P   
Sbjct: 117 ANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHH------GANFSCRTELDLRPQGL 170

Query: 206 ELTPNTFLFQWTCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVC 265
           EL  NT             A        +  +        C++D        E Q     
Sbjct: 171 ELFENTSAPYQLQTFV-LPATPPQLVSPRVLEVDTQGTVVCSLD--GLFPVSEAQVH--- 224

Query: 266 RPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCG-YSCSNLFDITTTTTTVSPAY 324
             L      +     V   N    A  +             +C+ +    +  T      
Sbjct: 225 --LALGD--QRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ---- 276

Query: 325 PVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS 384
                   T  I S P  +       E  EG  VT++C A             +     +
Sbjct: 277 --------TVTIYSFPAPNVILTKP-EVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRA 327

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                      L +      +   + C A   + 
Sbjct: 328 Q----------LLLKATPEDNGRSFSCSATLEVA 351

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4 Length = 450

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 15/67 (22%), Positives = 19/67 (28%), Gaps = 5/67 (7%)

Query: 94  CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPI 152
           C A       +       +L     V   PR      P      E +  T  C A G P+
Sbjct: 344 CSATLEVAGQLIHKNQTRELR----VLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPL 399

Query: 153 PVYTWSK 159
           P     K
Sbjct: 400 PELKCLK 406

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4 Length = 450

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 18/157 (11%), Positives = 34/157 (21%), Gaps = 11/157 (7%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIG-YPIP--VYTWSKGEVSIDGS 384
           ++      +   P     +        G  +TLRC   G  P         +GE  +   
Sbjct: 74  STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE 133

Query: 385 DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDS 444
                   +    ++         + C     +     + F         Q +    T  
Sbjct: 134 P-AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPP 192

Query: 445 CQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQ 481
                                C    +  + P   AQ
Sbjct: 193 QLVSPRVLEVDTQGTV----VCS---LDGLFPVSEAQ 222

>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 56.2 bits (136), Expect = 4e-10
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 10/85 (11%)

Query: 337 PSPPRFHNYSEP--TVEAEEGNFVTLRC-IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
                    ++   T+E  EG   +  C ++         W+ G  ++  S   ++ T  
Sbjct: 6   SGHVGI---TKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVG-SSSRFQATRQ 61

Query: 394 G---VLQIVGLVRQDAGIYVCVAAN 415
           G   +L +      DAG  V     
Sbjct: 62  GRKYILVVREAAPSDAGEVVFSVRG 86

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E Length = 363

 Score = 60.6 bits (146), Expect = 5e-10
 Identities = 29/331 (8%), Positives = 69/331 (20%), Gaps = 67/331 (20%)

Query: 112 QLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG-----EVSRKF 166
           ++E++        F   +       +G  +TL   +     P            +  +  
Sbjct: 85  EVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTL 144

Query: 167 FLRGFISAND----LCFLESESGPCTQQEAAWYFDRNSFITMPELTPNTFLFQWTCVISG 222
            +   +   D     C +                     I +      +          G
Sbjct: 145 SVSQ-LELQDSGTWTCTVLQNQKKVE---------FKIDIVVLAFQKAS---SIVYKKEG 191

Query: 223 KNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVC 282
           +            +            +   + ++  T        L  +     +     
Sbjct: 192 EQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFD------LKNKEVSVKRVTQDP 245

Query: 283 ADNCKDDADCTG---QAKCCPNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPS 338
                          QA       G  + +           V+      T          
Sbjct: 246 KLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQ------- 298

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQI 398
                                L C   G   P    S           + +  +    + 
Sbjct: 299 -------------------KNLTCEVWGPTSPKLMLSL-------KLENKEAKVSKREKA 332

Query: 399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           V ++  +AG++ C+ ++     +  E N+ V
Sbjct: 333 VWVLNPEAGMWQCLLSD--SGQVLLESNIKV 361

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E Length = 363

 Score = 53.3 bits (127), Expect = 1e-07
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 19/101 (18%)

Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGHYKLTL--------------- 392
            V  ++G+ V L C A       + W    ++ I G+ G +                   
Sbjct: 3   VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLW 62

Query: 393 ---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
              +  L I  L  +D+  Y+C   +   +     F +   
Sbjct: 63  DQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTAN 103

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C* Length = 175

 Score = 57.6 bits (139), Expect = 7e-10
 Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 9/102 (8%)

Query: 329 STPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGH 387
           S P    +              +  E + + LRC +     +   T+ +           
Sbjct: 79  SDPVQLEVHIGWLLLQAPRWVFK--EEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHH- 135

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                +    I     +D+G Y C    G  +   +  N+ +
Sbjct: 136 -----NSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C* Length = 175

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 16/77 (20%), Positives = 21/77 (27%), Gaps = 10/77 (12%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
                 E + VTL+C     P      W   E  I                I      D+
Sbjct: 15  QWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASS--------YFIDAATVNDS 66

Query: 407 GIYVCVAANGIG-DPIR 422
           G Y C        DP++
Sbjct: 67  GEYRCQTNLSTLSDPVQ 83

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens} Length = 339

 Score = 59.7 bits (144), Expect = 9e-10
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 10/91 (10%)

Query: 348 PTVEAEEGNFVTLRC-------IAIGYPIPVYTWSK--GEVSIDGSDGHYKLTLDGVLQI 398
                 EG  V LRC        A   P    TW K     ++ G +       DG L +
Sbjct: 26  KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWL 85

Query: 399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +  +++D+G YVC   N      +    + V
Sbjct: 86  LPALQEDSGTYVCTTRNASYC-DKMSIELRV 115

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens} Length = 339

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 20/147 (13%), Positives = 34/147 (23%), Gaps = 25/147 (17%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
             D G Y C   N       +  +                     F  +           
Sbjct: 90  QEDSGTYVCTTRNASYCDKMSIELRVFEN-------------TDAFLPFISYPQILTLST 136

Query: 357 FVTLRC-----IAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYV 410
              L C                W K  + +D  +  +        L +  +  +DAG Y 
Sbjct: 137 SGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYR 196

Query: 411 CVAANGIGD---PIRKEFNVIVRGNYE 434
           CV           I +   + ++   E
Sbjct: 197 CVLTFAHEGQQYNITRSIELRIKKKKE 223

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens} Length = 339

 Score = 50.1 bits (119), Expect = 1e-06
 Identities = 51/331 (15%), Positives = 89/331 (26%), Gaps = 76/331 (22%)

Query: 131 PTVEAEEGNFVTLRC-------IAIGYPIPVYTWSKG----EVSRKFFLRGFISANDLCF 179
                 EG  V LRC        A   P    TW K      V  +   R +     L  
Sbjct: 26  KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWL 85

Query: 180 L---ESESGP--CTQQEAAWYFDRNSFITMPELTP--NTFLFQWTCVISGKNARCRCFNP 232
           L   + +SG   CT + A++    +  + + E T     F+     +    +        
Sbjct: 86  LPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVL----V 141

Query: 233 CQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLYKEGECRPQPQNVCA---DNCKDD 289
           C +        T   +   ++              L K+ E     +        +    
Sbjct: 142 CPDLSEFTRDKTDVKIQWYKD-----------SLLLDKDNEKFLSVRGTTHLLVHDVA-- 188

Query: 290 ADCTGQAKCCPNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYS 346
                       D G Y C  +   +      T S                + P      
Sbjct: 189 ----------LEDAGYYRCVLTFAHEGQQYNITRS-----IELRIKKKKEETIPVII-SP 232

Query: 347 EPTVEAEEGNFVTLRCIAI---GYPIPVYTWSK-GEVSIDGSDGHYKLTLDG-------- 394
             T+ A  G+ +T+ C      G P+    W    +  I+ +    ++T           
Sbjct: 233 LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENN 292

Query: 395 ------VLQIVGLVRQDAGI-YVCVAANGIG 418
                  L    + R+D  + + CV  N + 
Sbjct: 293 ENYIEVPLIFDPVTREDLHMDFKCVVHNTLS 323

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X Length = 126

 Score = 55.7 bits (134), Expect = 9e-10
 Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 13/89 (14%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----- 393
            P             E +   +     G P P   W      ++ +   +   L+     
Sbjct: 3   MPASVQLHTA----VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANE 58

Query: 394 ----GVLQIVGLVRQDAGIYVCVAANGIG 418
               G L++      + G Y  +AAN  G
Sbjct: 59  TVRHGCLRLNQPTHVNNGNYTLLAANPFG 87

>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 102

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 23/107 (21%), Positives = 34/107 (31%), Gaps = 16/107 (14%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
           +S          P         V+AE G   TL C  +       TW K    +  S   
Sbjct: 5   SSGKVVF-AKEQPAHRE-----VQAEAGASATLSCE-VAQAQTEVTWYKDGKKLSSSS-K 56

Query: 388 YKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            ++   G    L +    + +AG Y C A        +  F + V G
Sbjct: 57  VRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ-----QLSFRLQVAG 98

>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 11/96 (11%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
           P    +  +   +       V L C       P  TW K    ++ S+    + +DG   
Sbjct: 8   PVHILSPQDKVSLTFTTSERVVLTCELSRVDFPA-TWYKDGQKVEESE-LLVVKMDGRKH 65

Query: 396 -LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            L +     QD+G + C             F V V+
Sbjct: 66  RLILPEAKVQDSGEFECRTEGV-----SAFFGVTVQ 96

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R* Length = 213

 Score = 57.5 bits (138), Expect = 1e-09
 Identities = 22/120 (18%), Positives = 30/120 (25%), Gaps = 15/120 (12%)

Query: 326 VYTSTPYT--PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVY--TWSKGEVSI 381
            Y S  Y                   +E   G  + L C A           W       
Sbjct: 89  SYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148

Query: 382 D----------GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                         G         L I G+ R D G+Y C A++G+    +    V V  
Sbjct: 149 QHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVHE 207

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R* Length = 213

 Score = 41.3 bits (96), Expect = 4e-04
 Identities = 17/103 (16%), Positives = 29/103 (28%), Gaps = 3/103 (2%)

Query: 331 PYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-HYK 389
             +P I S    H      +   +   V + C+     + V   ++        DG    
Sbjct: 2   YRSPFIASVSDQHG--VVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRIS 59

Query: 390 LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGN 432
                   I   +   AG+  C A           + V+V G 
Sbjct: 60  WDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGY 102

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347

 Score = 59.0 bits (142), Expect = 1e-09
 Identities = 20/109 (18%), Positives = 32/109 (29%), Gaps = 2/109 (1%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVR-Q 404
             P    + G+ V LRC   G  +    W   E+    +           L +  +    
Sbjct: 164 QVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDL 223

Query: 405 DAGIYVCVAANGIGDPIRK-EFNVIVRGNYEQWYYDRDTDSCQPFQYGG 452
           +     C A N +G      + NV    + +          C PF   G
Sbjct: 224 NRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDG 272

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347

 Score = 50.5 bits (120), Expect = 9e-07
 Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 31/136 (22%)

Query: 305 YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRC 362
            +C   N       +  V+ ++P          +                       +  
Sbjct: 228 VTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHH-------------------WCIPF 268

Query: 363 IAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---------DGVLQIVGLVRQDAGIYVCVA 413
              G P P   W      ++ +   +   L          G L++      + G Y  +A
Sbjct: 269 SVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLA 328

Query: 414 ANGIGDPIRKEFNVIV 429
           AN  G           
Sbjct: 329 ANPFGQ-ASASIMAAF 343

>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 113

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 328 TSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH 387
           +S     ++ S   + +     V A     V L C  +  P     W+K    +  S   
Sbjct: 2   SSGSSGTDVSSWIVYPSGKV-YVAAVRLERVVLTCE-LCRPWAEVRWTKDGEEVVESP-A 58

Query: 388 YKLTLDG---VLQIVGLVRQDAGIYVCVAAN 415
             L  +     L +  +  +D+G Y+C   +
Sbjct: 59  LLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89

>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 101

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 339 PPRFHNYSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG---HYKLTLD 393
           P        P    +   G+ V +    +        W K  V +   D     Y+   D
Sbjct: 8   PVLI---VTPLEDQQVFVGDRVEMAVE-VSEEGAQVMWMKNGVELTREDSFKARYRFKKD 63

Query: 394 G---VLQIVGLVRQDAGIYVCVAANG 416
           G   +L    +V++D G Y  +   G
Sbjct: 64  GKRHILIFSDVVQEDRGRYQVITNGG 89

>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 100

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 338 SPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-- 394
           S  +    +  T      G  + L+C           W+K  + +  SD   K+   G  
Sbjct: 6   SGLKI--LTPLTDQTVNLGKEICLKCEISENIPG--KWTKNGLPVQESD-RLKVVQKGRI 60

Query: 395 -VLQIVGLVRQDAGIYVCVAANG 416
             L I   + +D G YV      
Sbjct: 61  HKLVIANALTEDEGDYVFAPDAY 83

>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X Length = 122

 Score = 54.7 bits (131), Expect = 3e-09
 Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 13/98 (13%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTW------------SKGEVSIDGSDGHYKLTLD 393
               +E   G  + L C A         +                  +    G       
Sbjct: 14  PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 73

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
             L I G+ R D G+Y C A++G+    +    V V  
Sbjct: 74  STLTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVHE 110

>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 103

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 338 SPPRFHNYSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG- 394
               F   +E    ++ EE       C    +P    TW KG + +  S   ++ + +G 
Sbjct: 7   GANCF---TEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASG-KHQPSQEGL 61

Query: 395 --VLQIVGLVRQDAGIYVCVAAN 415
              L I  L + D+  Y C    
Sbjct: 62  TLRLTISALEKADSDTYTCDIGQ 84

>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus} Length = 112

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 19/108 (17%)

Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPV--YTWSKGEVSIDGSDGHYKLT 391
           P I   P        T  A  G+ V+  C A         + W     ++  ++      
Sbjct: 11  PQITVQP-------ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAH 63

Query: 392 LD----------GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           L            +L++  +     G Y CV +N  G        + +
Sbjct: 64  LRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C* Length = 204

 Score = 56.4 bits (136), Expect = 3e-09
 Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 9/104 (8%)

Query: 329 STPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGH 387
           S P    +              +  E + + LRC +     +   T+ +           
Sbjct: 79  SDPVQLEVHIGWLLLQAPRWVFK--EEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHH- 135

Query: 388 YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
                +    I     +D+G Y C    G  +   +   + +  
Sbjct: 136 -----NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQ 174

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C* Length = 204

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 16/77 (20%), Positives = 21/77 (27%), Gaps = 10/77 (12%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
                 E + VTL+C     P      W   E  I                I      D+
Sbjct: 15  QWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQASS--------YFIDAATVDDS 66

Query: 407 GIYVCVAANGIG-DPIR 422
           G Y C        DP++
Sbjct: 67  GEYRCQTQLSTLSDPVQ 83

>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 126

 Score = 53.8 bits (129), Expect = 5e-09
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 15/94 (15%)

Query: 350 VEAEEGNFVTLRCIAIGYPI---PVYTWSKGEVS--IDGSDGHYKLTLDG---------V 395
              + G  +T         +   P   W KG+       +  H +L              
Sbjct: 17  GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFE 76

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +QI+      AG Y C             F++ V
Sbjct: 77  MQIIKAKDNFAGNYRCEVTYKDKF-DSCSFDLEV 109

>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E* Length = 204

 Score = 55.3 bits (132), Expect = 6e-09
 Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 5/130 (3%)

Query: 292 CTGQAKCCPNDCGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVE 351
           C G          Y      D                +     +          +   V 
Sbjct: 66  CKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVS 125

Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ--DAGIY 409
              G  V L C    YP     W   + +I G +    +  D     +    +   +G Y
Sbjct: 126 IS-GTTVILTCPQ--YPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYY 182

Query: 410 VCVAANGIGD 419
           VC       +
Sbjct: 183 VCYPRGSKPE 192

>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E* Length = 204

 Score = 49.5 bits (117), Expect = 7e-07
 Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 8/79 (10%)

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
           + +E   V L C          TW K    I       K        +    +   G+Y 
Sbjct: 14  DYQEDGSVLLTC---DAEAKNITWFKDGKMIGFLTEDKKK-----WNLGSNAKDPRGMYQ 65

Query: 411 CVAANGIGDPIRKEFNVIV 429
           C  +     P++  + +  
Sbjct: 66  CKGSQNKSKPLQVYYRMGS 84

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B* Length = 349

 Score = 56.8 bits (136), Expect = 7e-09
 Identities = 24/145 (16%), Positives = 40/145 (27%), Gaps = 18/145 (12%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            ND G Y+C   N    +     +     V        +    P      +  +E     
Sbjct: 88  LNDTGNYTCMLRNTTYCSKVAFPLE----VVQKDSCFNSPMKLP----VHKLYIEYGIQR 139

Query: 357 FV--TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA- 413
                +         P  TW  G   I     +  +     L  +  +  + G Y CV  
Sbjct: 140 ITCPNVDGYFPSSVKPTITWYMGCYKIQNF--NNVIPEGMNLSFLIALISNNGNYTCVVT 197

Query: 414 --ANGIGDPIRKEFNVIVRGNYEQW 436
              NG    + +   V V G+ +  
Sbjct: 198 YPENGRTFHLTRTLTVKVVGSPKNA 222

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B* Length = 349

 Score = 47.9 bits (113), Expect = 5e-06
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 22/150 (14%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTV-EAEEGNF 357
            ++ G Y+C   +     T  ++    V       P    PP  H+ ++  V E E G  
Sbjct: 186 ISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGS--PKNAVPPVIHSPNDHVVYEKEPGEE 243

Query: 358 VTLRCIAI----GYPIPVYTWSKGEVSIDGSDGHYKL------------TLDGVLQIVGL 401
           + + C               W+      D       +            T   +L I  +
Sbjct: 244 LLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKV 303

Query: 402 VRQD-AGIYVCVAANGIGDPIRKEFNVIVR 430
             +D    YVC A +  G+ + K   V  +
Sbjct: 304 TSEDLKRSYVCHARSAKGE-VAKAAKVKQK 332

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B* Length = 349

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 14/103 (13%), Positives = 27/103 (26%), Gaps = 19/103 (18%)

Query: 348 PTVEAEEGNFVTLRCIAI-----------GYPIPVYTWSK------GEVSIDGSDGHYKL 390
             ++  E     ++C                      W         E  I+      ++
Sbjct: 15  RQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI 74

Query: 391 TLD-GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGN 432
           + +  VL     +  D G Y C+  N      +  F + V   
Sbjct: 75  SKEKDVLWFRPTLLNDTGNYTCMLRNTTYC-SKVAFPLEVVQK 116

>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A Length = 108

 Score = 52.8 bits (127), Expect = 8e-09
 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 11/84 (13%)

Query: 337 PSPPRFHNYSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
             P RF   ++   T EA EG   TL+C      +    W KG  ++      Y L  DG
Sbjct: 6   SGPARF---TQDLKTKEASEGATATLQCEL--SKVAPVEWKKGPETLRDGG-RYSLKQDG 59

Query: 395 ---VLQIVGLVRQDAGIYVCVAAN 415
               LQI  L   DAG Y C+   
Sbjct: 60  TRCELQIHDLSVADAGEYSCMCGQ 83

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens} Length = 262

 Score = 55.7 bits (134), Expect = 9e-09
 Identities = 18/121 (14%), Positives = 28/121 (23%), Gaps = 24/121 (19%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
            ND G Y C          +  S   P+         +                 EG  +
Sbjct: 57  VNDSGEYRC------QRGLSGRSD--PIQLEIHRGWLLLQVSSR--------VFTEGEPL 100

Query: 359 TLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI 417
            LRC A     +    + +   +            +  L I+       G Y C      
Sbjct: 101 ALRCHAWKDKLVYNVLYYRNGKAFKFFHW------NSNLTILKTNISHNGTYHCSGMGKH 154

Query: 418 G 418
            
Sbjct: 155 R 155

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens} Length = 262

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 15/135 (11%)

Query: 300 PNDCG-YSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFV 358
            +  G Y CS +     T+  +S    V         +   P  +  +  T    EGN V
Sbjct: 140 ISHNGTYHCSGMGKHRYTSAGIS--VTVK-------ELFPAPVLN--ASVTSPLLEGNLV 188

Query: 359 TLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
           TL C                  +       +       QI+   R+D+G+Y C AA   G
Sbjct: 189 TLSCETKLLLQRPGLQLYFSFYMGSKTLRGR-NTSSEYQILTARREDSGLYWCEAATEDG 247

Query: 419 DPIRK--EFNVIVRG 431
           + +++  E  + V G
Sbjct: 248 NVLKRSPELELQVLG 262

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens} Length = 262

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 10/80 (12%)

Query: 348 PTVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
           P V   +   VTL C  +  P      W     +   S            +I      D+
Sbjct: 9   PWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPS--------YRITSASVNDS 60

Query: 407 GIYVCVAANGIG-DPIRKEF 425
           G Y C        DPI+ E 
Sbjct: 61  GEYRCQRGLSGRSDPIQLEI 80

>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK--GE-VSIDGSDGHYKL 390
           P I  PP         +   EG    L+C A    +   +W    G  ++         +
Sbjct: 342 PVIVEPPA-------DLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV 393

Query: 391 TLDGVLQIVGLVRQDAGIYVCVAANGIG 418
             DG L    +  QD G+Y C+ +N +G
Sbjct: 394 LSDGTLNFTNVTVQDTGMYTCMVSNSVG 421

>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus} Length = 106

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 12/84 (14%), Positives = 22/84 (26%), Gaps = 8/84 (9%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
                   +   +  +       +C      +    W K  V +  S     ++  G   
Sbjct: 8   QLEV--LQDIADLTVKAAEQAVFKCEVSDEKVTG-KWYKNGVEVRPSK-RITISHVGRFH 63

Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
            L I  +  +D G Y  V      
Sbjct: 64  KLVIDDVRPEDEGDYTFVPDGYAL 87

>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 12/88 (13%)

Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDGS-DGHYKL 390
           P I   PR        +   EG    L+C     P+    W    G V    S      +
Sbjct: 353 PFIMDAPR-------DLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV 403

Query: 391 TLDGVLQIVGLVRQDAGIYVCVAANGIG 418
             DG L    ++  D G+Y C+  N  G
Sbjct: 404 LNDGTLNFSHVLLSDTGVYTCMVTNVAG 431

>3ngg_A Omwaprin-A; venom protein, racemic protein crystallography, direct metho antibiotic; 1.33A {Oxyuranus microlepidotus} Length = 50

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 18/38 (47%), Positives = 20/38 (52%)

Query: 270 KEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSC 307
           K G C P+PQ  C   CK+D  C GQ KCC   C   C
Sbjct: 6   KPGLCPPRPQKPCVKECKNDDSCPGQQKCCNYGCKDEC 43

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 56.4 bits (136), Expect = 2e-08
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDA 406
            E  EG      C  I    PV TW K +  +  S   Y    +G    L I  +   D 
Sbjct: 492 TEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSV-KYMKRYNGNDYGLTINRVKGDDK 550

Query: 407 GIYVCVAANGIG 418
           G Y   A N  G
Sbjct: 551 GEYTVRAKNSYG 562

>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens} Length = 95

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 334 PNIPSPPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL 392
           P       F    +P  VE   G+            + V  W +G   I  S+  Y L  
Sbjct: 3   PGKKPVSAFS--KKPRSVEVAAGSPAVFEAETERAGVKV-RWQRGGSDISASN-KYGLAT 58

Query: 393 DG---VLQIVGLVRQDAGIYVCVAAN 415
           +G    L +  +   D G Y  +A +
Sbjct: 59  EGTRHTLTVREVGPADQGSYAVIAGS 84

>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens} Length = 113

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
           P +F         EA EG    LRC       PV  W KG  ++   D  + L  DG   
Sbjct: 19  PIKFT--EGLRNEEATEGATAVLRCELSKMA-PV-EWWKGHETLRDGD-RHSLRQDGARC 73

Query: 395 VLQIVGLVRQDAGIYVCVA 413
            LQI GLV +DAG Y+C+ 
Sbjct: 74  ELQIRGLVAEDAGEYLCMC 92

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A Length = 202

 Score = 54.0 bits (129), Expect = 2e-08
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 2/89 (2%)

Query: 347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
           E    A+ G+ V+L C   G   P ++W     S        + T    L +  +   + 
Sbjct: 8   ESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGT-TSTLTMNPVSFGNE 66

Query: 407 GIYVCVAANGIGDPIRKEFNVIVRGNYEQ 435
             Y+C A       + K   V +    + 
Sbjct: 67  HSYLCTATCESR-KLEKGIQVEIYSFPKD 94

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A Length = 202

 Score = 40.1 bits (93), Expect = 8e-04
 Identities = 18/127 (14%), Positives = 31/127 (24%), Gaps = 26/127 (20%)

Query: 303 CGYSCSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRC 362
           C  +C +          +             P I                E G  +T++C
Sbjct: 71  CTATCESRKLEKGIQVEIYSFPKD-------PEIHLSG----------PLEAGKPITVKC 113

Query: 363 IAIG-YPIP--VYTWSKGEVSIDGS------DGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
                YP         KG+  +         D     T    +    ++     + VC A
Sbjct: 114 SVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRA 173

Query: 414 ANGIGDP 420
              I + 
Sbjct: 174 KLHIDEM 180

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A Length = 182

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 14/95 (14%)

Query: 349 TVEAEEGNFVTLRC--IAIGYPIPVYTWSKG-----------EVSIDGSDGHYKLTLDGV 395
                 G  + L      +   I    W K            E         YKL  +G 
Sbjct: 8   ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGT 67

Query: 396 LQIVGLVRQDAGIYVCVAANGIG-DPIRKEFNVIV 429
           L+I  L   D  IY     +  G + + K F++ +
Sbjct: 68  LKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKI 102

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A Length = 182

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 10/73 (13%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQD 405
           S+P +     N  TL C  +    P     +             L L   +         
Sbjct: 107 SKPKISWTCIN-TTLTCEVMNGTDPELNLYQDGKH---------LKLSQRVITHKWTTSL 156

Query: 406 AGIYVCVAANGIG 418
           +  + C A N + 
Sbjct: 157 SAKFKCTAGNKVS 169

>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 103

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 10/85 (11%)

Query: 338 SPPRFHNYSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-DGSDGHYKLTLDG 394
           S       ++      A  G  V L C  +        W K    I  G    Y++ ++G
Sbjct: 6   SGIMV---TKQLEDTTAYCGERVELECE-VSEDDANVKWFKNGEEIIPGPKSRYRIRVEG 61

Query: 395 ---VLQIVGLVRQDAGIYVCVAANG 416
              +L I G  + DA  Y  +   G
Sbjct: 62  KKHILIIEGATKADAAEYSVMTTGG 86

>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A Length = 108

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 18/94 (19%), Positives = 25/94 (26%), Gaps = 15/94 (15%)

Query: 350 VEAEEGNFVTLRCIAIGYPI---PVYTWSKGE-----------VSIDGSDGHYKLTLDGV 395
            E   G  +T      G  +   PV  W KG+           + +  S           
Sbjct: 14  GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFE 73

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           L I        G Y C  +          FN+ V
Sbjct: 74  LHITDAQPAFTGSYRCEVSTKDKF-DCSNFNLTV 106

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A Length = 222

 Score = 50.4 bits (120), Expect = 4e-07
 Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 6/98 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSIDGSDGHYKLTLDG-- 394
            P         V     +   L C A GYP     W+    +V    +        +   
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174

Query: 395 -VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
            V   + +      I+ C       +       +++  
Sbjct: 175 NVTSTLRINTTTNEIFYCTFRRLDPE-ENHTAELVIPE 211

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 52.3 bits (124), Expect = 4e-07
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 216 WTCVISGKNARC-RCFNPCQNQDPQCPSNTRCAVDLVRNPETRETQYIAVCRPLY----- 269
            + V    + +C +C  PC+          +C          +  + +  C  L      
Sbjct: 49  GSLVWCQNHKQCSKCLEPCKESGDLRK--HQCQSFCEPLFPKKSYECLTSCEFLKYILLV 106

Query: 270 KEGECRPQPQ------NVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDITTTTTTVSPA 323
           K+G+C P P+        C ++C+ D +C+G  KCC N CG++C     +          
Sbjct: 107 KQGDC-PAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRK 165

Query: 324 YPVYTST 330
              +T  
Sbjct: 166 ELRFTEL 172

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3 Length = 176

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 349 TVEAEEGNFVTLRC--IAIGYPIPVYTWSKGEVSI---------DGSDGHYKLTLDGVLQ 397
           TV    G+ + L      +   I    W +G   +             G +++  +G L+
Sbjct: 5   TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLK 64

Query: 398 IVGLVRQDAGIYVCVAANGIG-DPIRKEFNV 427
           I  L R D+G Y     +  G   + K  ++
Sbjct: 65  IKNLTRDDSGTYNVTVYSTNGTRILNKALDL 95

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3 Length = 176

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 10/73 (13%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQD 405
           S+P +  E  N  TL C  +          +G+  +                +       
Sbjct: 102 SKPMIYWECSN-ATLTCEVLEGTDVELKLYQGKEHLRSLR---------QKTMSYQWTNL 151

Query: 406 AGIYVCVAANGIG 418
              + C A N + 
Sbjct: 152 RAPFKCKAVNRVS 164

>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B Length = 202

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 11/83 (13%)

Query: 347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-----GHYKLTLDGV------ 395
           +     + G+ V+L C             +  +    +D         L  + +      
Sbjct: 9   KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKAL 68

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
             I  +  +D+G Y C+   G  
Sbjct: 69  FHIPSVQVRDSGQYRCLVICGAA 91

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-----HYKLT 391
           P     H      VE   G F T +C AIG  +         + +  +            
Sbjct: 161 PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR 220

Query: 392 LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
                 +V   ++DAG Y C+     G  I     ++V+
Sbjct: 221 FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK 259

>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens} Length = 124

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 14/101 (13%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH-------YKLTL 392
               N++E T+  EEG  +TL+C+          W          + +       Y+L  
Sbjct: 2   GSLTNHTE-TITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLH 60

Query: 393 ----DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                  + +  +  QD G+Y C+  +       KE  VIV
Sbjct: 61  HSANQLSITVPNVTLQDEGVYKCLHYS--DSVSTKEVKVIV 99

>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49} Length = 304

 Score = 47.1 bits (111), Expect = 8e-06
 Identities = 20/117 (17%), Positives = 31/117 (26%), Gaps = 18/117 (15%)

Query: 312 DITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPT-VEAEEGNFVTLRC---IAIGY 367
           +  +   TV     + +       +       N +EP          V L      + G 
Sbjct: 63  NAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGK 122

Query: 368 PIPV-----YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
                    Y+WSKGE  ID +           + I        G+Y         D
Sbjct: 123 TPADNYELHYSWSKGEDVIDTT---------QDITIQEFTADKNGVYTVKVWGESED 170

>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49} Length = 304

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 19/89 (21%)

Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIG-YPIPV---YTWSKGEVSIDGSDGHYK 389
             +                  G+  TL     G  P+P    YTW+K +   + +     
Sbjct: 3   FTVSIQS-------NKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTAT-- 53

Query: 390 LTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
                 L +     ++AG Y     +   
Sbjct: 54  ------LTVADATSENAGSYKVTVQDTDT 76

>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49} Length = 304

 Score = 41.4 bits (96), Expect = 6e-04
 Identities = 17/142 (11%), Positives = 39/142 (27%), Gaps = 36/142 (25%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +  G Y+       + +  + +               +             +     GN
Sbjct: 154 ADKNGVYTVKVWGESEDSAASASTKIMLA-----TMNVDQDVVE--------SKTVALGN 200

Query: 357 FVTLRCI--------AIGYPIPVYTWS-----KGEVS-------IDGSDGHYKLTLDGVL 396
            ++L  +        + G P     ++     +G++S       +  +   + +T DG L
Sbjct: 201 EISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHL 260

Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
                   D   + CVA     
Sbjct: 261 FKESATYDDTAKFWCVAKLYQQ 282

>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens} Length = 121

 Score = 44.5 bits (105), Expect = 9e-06
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 15/96 (15%)

Query: 349 TVEAEEGNFVTLRC-IAIGYPIPVYTWSKGE----VSIDGS-----DGHYK--LTLD--- 393
            +    G+ VTL    ++       TW        V  D       +  +K  + LD   
Sbjct: 13  HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQS 72

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           G L I  + ++D   Y+       G+    +  + V
Sbjct: 73  GALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQV 108

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J Length = 585

 Score = 46.5 bits (109), Expect = 2e-05
 Identities = 21/149 (14%), Positives = 35/149 (23%), Gaps = 14/149 (9%)

Query: 300 PNDCG-YSC--SNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGN 356
            +D G Y C   +     +                   ++     F       +  E  N
Sbjct: 194 LSDAGQYLCQAGDDS--NSNKKNADLQVLKPEPELVYEDLRGSVTF----HCALGPEVAN 247

Query: 357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-----VLQIVGLVRQDAGIYVC 411
                C            +         +G   L          + I GL ++DAG Y+C
Sbjct: 248 VAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 307

Query: 412 VAANGIGDPIRKEFNVIVRGNYEQWYYDR 440
            A +                  E+    R
Sbjct: 308 GAHSDGQLQEGSPIQAWQLFVNEESTIPR 336

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J Length = 585

 Score = 44.6 bits (104), Expect = 8e-05
 Identities = 16/96 (16%), Positives = 22/96 (22%), Gaps = 13/96 (13%)

Query: 348 PTVEAEEGNFVTLRCI----AIGYPIPVYTWSKGEVSIDGSDGHYKL---------TLDG 394
             V A  G  + + C        Y      W+        S               +   
Sbjct: 450 GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLV 509

Query: 395 VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            L +  + R D G Y C    G          V V 
Sbjct: 510 SLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVE 545

>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A Length = 117

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 15/100 (15%), Positives = 24/100 (24%), Gaps = 14/100 (14%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVY--TWSK------------GEVSIDGSDGHYKLT 391
           +   + AE+G  + L+C        V    W +            G              
Sbjct: 9   TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPG 68

Query: 392 LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
               L +  L   D G Y C+              + V  
Sbjct: 69  PGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLE 108

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A* Length = 268

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 19/111 (17%), Positives = 30/111 (27%), Gaps = 26/111 (23%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCI---AIGYPIPVYTWSKGEVSIDGS---------- 384
             P     S P +    G  V + C+        +    W   +   D S          
Sbjct: 4   GLPGL-TVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNL 62

Query: 385 ---DGHYK---------LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK 423
               G ++            DG L +  + + D GIY C         + K
Sbjct: 63  SVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMK 113

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A* Length = 268

 Score = 42.2 bits (98), Expect = 3e-04
 Identities = 21/143 (14%), Positives = 36/143 (25%), Gaps = 30/143 (20%)

Query: 345 YSEPTVEAEEGNFVTLRCIAIGYP---IPVYTWSK-----------------GEVSIDGS 384
                +    G+   +RC         +    W                          S
Sbjct: 123 EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQS 182

Query: 385 DGHYK---------LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK-EFNVIVRGNYE 434
            G ++            DG +++  +   D GIY C    G  +  +    +V+      
Sbjct: 183 LGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242

Query: 435 QWYYDRDTDSCQPFQYGGCQGNH 457
                  TD  Q     G Q +H
Sbjct: 243 TISPTPPTDKGQQGILNGNQHHH 265

>1udk_A Nawaprin; antiparallel beta-sheet, spiral backbone configuration, unknown function; NMR {Naja nigricollis} SCOP: g.3.14.1 Length = 51

 Score = 39.5 bits (92), Expect = 9e-05
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 270 KEGECRPQPQN------VCADNCKDDADCTGQAKCCPNDCG 304
           K G C P          +C   C  D+ C    KCC N CG
Sbjct: 3   KSGSC-PDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCG 42

>1fle_I Elafin; hydrolase, serine protease, 3D-structure, zymogen, pancreas, signal, complex (serine protease/inhibitor); 1.90A {Homo sapiens} SCOP: g.3.14.1 PDB: 2rel_A Length = 57

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)

Query: 270 KEGECRPQPQNVCA-----DNCKDDADCTGQAKCCPNDCGYSCSN 309
           K G C P     CA     + C  D DC G  KCC   CG +C  
Sbjct: 12  KPGSC-PIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFV 55

>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A* Length = 210

 Score = 42.2 bits (98), Expect = 2e-04
 Identities = 20/92 (21%), Positives = 27/92 (29%), Gaps = 5/92 (5%)

Query: 346 SEPTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ 404
            EP V    G    L C            W   + S+         T   VL +      
Sbjct: 13  PEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSD---TGRSVLTVRNASLS 69

Query: 405 DAGIYVCVAANGIGDPIRKEFNVIVRGNYEQW 436
            AG  VCV + G G   +    ++V     Q 
Sbjct: 70  AAGTRVCVGSCG-GRTFQHTVQLLVYAFPNQL 100

>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus} Length = 108

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 13/83 (15%), Positives = 18/83 (21%), Gaps = 11/83 (13%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH-------YKLTL 392
            +        V   EG    L C           WS         D          +L  
Sbjct: 6   SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVR 65

Query: 393 DG----VLQIVGLVRQDAGIYVC 411
                  + +  +   D G Y C
Sbjct: 66  ASWHELSISVSDVSLSDEGQYTC 88

>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 15/116 (12%)

Query: 330 TPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPI---PVYTWSKGE----VSID 382
           +  +     P         +V  E G    +     G  +   P   W KG+     S  
Sbjct: 2   SSGSSGAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKS 61

Query: 383 GSDGHYKLTLDGV-------LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           G+   +K + +         L I  +V  D G Y               FN+ V  
Sbjct: 62  GARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTC-DSCGFNIDVEA 116

>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A* Length = 663

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 1/74 (1%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIV 399
           P     S      + G    L+C      +    W      +      Y L     L I 
Sbjct: 533 PDKSKGSYRQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKNLLIF 591

Query: 400 GLVRQDAGIYVCVA 413
            L   D+G+Y C++
Sbjct: 592 NLSEGDSGVYQCLS 605

>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A Length = 231

 Score = 41.3 bits (96), Expect = 4e-04
 Identities = 13/95 (13%), Positives = 21/95 (22%), Gaps = 16/95 (16%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHY------- 388
           P               E+       C +  G P P  TW +    ++             
Sbjct: 116 PEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTS 175

Query: 389 --------KLTLDGVLQIVGLVRQDAGIYVCVAAN 415
                    L+L   L +          + C A  
Sbjct: 176 RTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHY 210

>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A Length = 231

 Score = 40.6 bits (94), Expect = 8e-04
 Identities = 21/106 (19%), Positives = 26/106 (24%), Gaps = 23/106 (21%)

Query: 347 EPTVEAEEGNFVTLRCIAIGYPIP-VYTWSKGE----------------------VSIDG 383
            P VE   G  V L C   G     +  W   +                          G
Sbjct: 7   PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRG 66

Query: 384 SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
               Y+L   G L +      D   YVCV   G          + V
Sbjct: 67  RSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNV 112

>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus} Length = 180

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 10/73 (13%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQD 405
           S+P +  E  N  TL C  +          +G+           L       +       
Sbjct: 107 SKPMIYWECSN-ATLTCEVLEGTDVELKLYQGKEH---------LRSLRQKTMSYQWTNL 156

Query: 406 AGIYVCVAANGIG 418
              + C A N + 
Sbjct: 157 RAPFKCKAVNRVS 169

>2z7f_I Antileukoproteinase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} Length = 50

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 6/43 (13%)

Query: 270 KEGECRPQPQNVCA-----DNCKDDADCTGQAKCCPNDCGYSC 307
           K G+C P     C      + C+ D  C    KCC   CG SC
Sbjct: 3   KPGKC-PVTYGQCLMLNPPNFCEMDGQCKRDLKCCMGMCGKSC 44

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 16/121 (13%), Positives = 32/121 (26%), Gaps = 16/121 (13%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
             P     +   + +  G+ VTL C  +         W   + +       +   +   L
Sbjct: 5   RCPAQEV-ARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRW-AGMGRRL 62

Query: 397 QIVGLVRQDAGIYVCVAANG--------IGDPIRKEFNVIVRGNYE-----QWYYDRDTD 443
            +  +   D+G Y C  A          +  P  +      R +       +W       
Sbjct: 63  LLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRSTPS 122

Query: 444 S 444
            
Sbjct: 123 L 123

>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A Length = 110

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 18/101 (17%)

Query: 346 SEPTVEAEEGNFVTLRC-IAIGYPIPVYTWSKGE----------VSIDGSDGHYK--LTL 392
           S P + A  G+ VTL+       P    TW   +           +    +  +K  + L
Sbjct: 9   SIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYL 68

Query: 393 D---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           +   G L I  + ++D G Y         +    +  + V 
Sbjct: 69  EENNGALHISNVRKEDKGTYYMRVLRETEN--ELKITLEVF 107

>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens} Length = 590

 Score = 41.5 bits (96), Expect = 8e-04
 Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 2/107 (1%)

Query: 307 CSNLFDITTTTTTVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIG 366
           C        +  +   +     +          P+        V     +   L C    
Sbjct: 467 CGWDQGRCISIYSSERSVLQSINPAEPHKECPNPKPDKAPLQKVSLAPNSRYYLSCPMES 526

Query: 367 YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVA 413
                Y+W   E      +  +  + + +L I  L  Q  G Y C A
Sbjct: 527 -RHATYSWRHKENVEQSCEPGH-QSPNCILFIENLTAQQYGHYFCEA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	615
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	99.95
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	99.94
2ody_E	127	Boophilin; kunitz-type thrombin inhibitor, blood c	99.91
1bik_A	147	Bikunin; glycoprotein, trypstatin, urinary trypsin	99.9
1toc_R	120	Ornithodorin; vitamin K, zymogen, gamma-carboxyglu	99.78
1toc_R	120	Ornithodorin; vitamin K, zymogen, gamma-carboxyglu	99.72
1dtk_A	57	Dendrotoxin K; presynaptic neurotoxin; NMR {Dendro	99.71
3aub_A	58	BPTI, bovine pancreatic trypsin inhibitor; serine	99.71
2ddi_A	70	WAP, follistatin/kazal, immunoglobulin, kunitz and	99.71
1kth_A	58	Collagen alpha 3(VI) chain; anisotropic refinement	99.71
1y62_A	60	Conkunitzin-S1; alpha helix, beta sheet, 310 helix	99.7
3aug_A	65	BPTI, bovine pancreatic trypsin inhibitor; serine	99.69
3byb_A	59	Textilinin, textilinin-1; BPTI-like, beta hairpin,	99.69
1g6x_A	58	Pancreatic trypsin inhibitor; serine protease inhi	99.69
1aap_A	58	Alzheimer'S disease amyloid A4 protein; proteinase	99.69
4dtg_K	66	Tissue factor pathway inhibitor; antibody, blood c	99.69
1dtx_A	59	Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {	99.69
1bun_B	61	BETA2-bungarotoxin; hydrolase, presynaptic neuroto	99.69
3m7q_B	61	Kunitz-type proteinase inhibitor SHPI-1; trypsin-i	99.69
1jc6_A	65	Venom basic protease inhibitors IX and VIIIB; snak	99.68
1adz_A	71	TFPI, EPI, LACI, tissue factor pathway inhibitor;	99.68
1bf0_A	60	Calcicludine; calcium channel blocker; NMR {Dendro	99.68
1irh_A	61	Tissue factor pathway inhibitor; non-protease inhi	99.68
1zr0_B	63	TFPI-2, tissue factor pathway inhibitor 2, PP5; se	99.68
2kcr_A	61	Anntoxin; protein; NMR {Hyla annectans}	99.67
2jot_A	55	Huwentoxin-11; proteinase inhibitor; NMR {Ornithoc	99.67
1yc0_I	75	Kunitz-type protease inhibitor 1; hydrolase/inhibi	99.67
3aug_A	65	BPTI, bovine pancreatic trypsin inhibitor; serine	99.66
1dtk_A	57	Dendrotoxin K; presynaptic neurotoxin; NMR {Dendro	99.65
3aub_A	58	BPTI, bovine pancreatic trypsin inhibitor; serine	99.65
1bun_B	61	BETA2-bungarotoxin; hydrolase, presynaptic neuroto	99.64
2ddi_A	70	WAP, follistatin/kazal, immunoglobulin, kunitz and	99.64
1kth_A	58	Collagen alpha 3(VI) chain; anisotropic refinement	99.63
1y62_A	60	Conkunitzin-S1; alpha helix, beta sheet, 310 helix	99.63
1g6x_A	58	Pancreatic trypsin inhibitor; serine protease inhi	99.63
1dtx_A	59	Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {	99.63
3byb_A	59	Textilinin, textilinin-1; BPTI-like, beta hairpin,	99.63
1jc6_A	65	Venom basic protease inhibitors IX and VIIIB; snak	99.62
1bf0_A	60	Calcicludine; calcium channel blocker; NMR {Dendro	99.62
4dtg_K	66	Tissue factor pathway inhibitor; antibody, blood c	99.62
3m7q_B	61	Kunitz-type proteinase inhibitor SHPI-1; trypsin-i	99.62
1irh_A	61	Tissue factor pathway inhibitor; non-protease inhi	99.61
1aap_A	58	Alzheimer'S disease amyloid A4 protein; proteinase	99.61
1adz_A	71	TFPI, EPI, LACI, tissue factor pathway inhibitor;	99.61
2kcr_A	61	Anntoxin; protein; NMR {Hyla annectans}	99.61
2jot_A	55	Huwentoxin-11; proteinase inhibitor; NMR {Ornithoc	99.6
1co7_I	99	BPTI, bovine pancreatic trypsin inhibitor; complex	99.59
1zr0_B	63	TFPI-2, tissue factor pathway inhibitor 2, PP5; se	99.58
1yc0_I	75	Kunitz-type protease inhibitor 1; hydrolase/inhibi	99.58
2uuy_B	52	Tryptase inhibitor; calcium, zymogen, protease, hy	99.52
1co7_I	99	BPTI, bovine pancreatic trypsin inhibitor; complex	99.51
2uuy_B	52	Tryptase inhibitor; calcium, zymogen, protease, hy	99.41
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	98.55
3ngg_A	50	Omwaprin-A; venom protein, racemic protein crystal	98.54
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	98.5
3knb_A	100	Titin; IG-like, titin, OBSL1, ATP-binding, calmodu	98.49
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	98.35
3knb_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, AT	98.35
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	98.34
1udk_A	51	Nawaprin; antiparallel beta-sheet, spiral backbone	98.34
1u2h_A	99	APEG-1, aortic preferentially expressed protein 1;	98.32
2kkq_A	116	Myotilin; unknown function, actin-binding, cell me	98.31
2dm2_A	110	Palladin; beta-sandwich, KIAA0992, actin-associate	98.29
2ckn_A	95	Basic fibroblast growth factor receptor 1; kinase,	98.27
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	98.24
2bk8_A	97	Connectin, M1, titin heart isoform N2-B; IG domain	98.19
2lu7_A	84	Obscurin-like protein 1; structural genomics, nort	98.18
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	98.18
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	98.17
1g1c_A	99	Immunoglobulin-like domain I1 from titin; immunogl	98.16
2dm3_A	110	KIAA0992 protein, palladin; beta-sandwich, myopall	98.14
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	98.14
3cx2_A	108	Myosin-binding protein C, cardiac-type; protonatio	98.13
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	98.11
2e7c_A	118	Myosin-binding protein C, fast-type; IG-like domai	98.09
3qp3_A	103	Titin; I-SET IG-like, sarcomere, M-BAND, transfera	98.08
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	98.08
1wwb_X	103	Protein (brain derived neurotrophic factor recepto	98.08
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	98.05
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	98.03
2yr3_A	99	Myosin light chain kinase, smooth muscle; IG domai	98.03
2yuz_A	100	Myosin-binding protein C, SLOW-type; immunoglobuli	98.02
1fle_I	57	Elafin; hydrolase, serine protease, 3D-structure,	98.01
2lvc_A	91	Obscurin-like protein 1; structural genomics, nort	98.01
1pd6_A	104	Cardiac MYBP-C;, myosin-binding protein C, cardiac	98.0
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	97.97
1gl4_B	98	Basement membrane-specific heparan sulfate proteog	97.96
1he7_A	126	High affinity nerve growth factor receptor; transf	97.95
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	97.95
4hwu_A	95	Fibroblast growth factor receptor 2; FGFR2, KGFR,	97.94
2z7f_I	50	Antileukoproteinase; serine protease, serine prote	97.93
2cry_A	122	KIN of IRRE-like protein 3; IG fold, KIN of irregu	97.91
2ens_A	96	Advanced glycosylation END product-specific recept	97.91
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	97.9
1waa_A	93	Titin; metal binding protein, calmodulin-binding,	97.88
2edn_A	118	Myosin-binding protein C, fast-type; beta-sandwich	97.87
2e7b_A	103	Obscurin; IG-like domain, structural genomics, NPP	97.87
2e6p_A	104	Obscurin-like protein 1; IG-like domain, structura	97.81
1x44_A	103	Myosin-binding protein C, SLOW-type; IG-like domai	97.81
3m45_A	108	Cell adhesion molecule 2; IG fold, dimer, disulfid	97.78
2dlt_A	106	Myosin binding protein C, fast-type; IG-like domai	97.77
4fa8_A	203	Secreted protein BARF1; immunoglobulin-like domain	97.76
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	97.76
1fhg_A	154	Telokin; immunoglobulin fold, beta barrel, contrac	97.76
3rbg_A	124	Cytotoxic and regulatory T-cell molecule; IGV, crt	97.75
2dku_A	103	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	97.73
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	97.73
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	97.7
2edk_A	101	Myosin-binding protein C, fast-type; IG fold, fast	97.67
2id5_A	477	Lingo-1, leucine rich repeat neuronal 6A; CNS-spec	97.67
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	97.65
2eny_A	104	Obscurin; beta-sandwich, IG-fold, structural genom	97.65
2yuv_A	100	Myosin-binding protein C, SLOW-type; SLOW-type myo	97.65
2k1m_A	95	Myosin-binding protein C, cardiac-type; IG-I domai	97.64
2dav_A	126	SLOW MYBP-C, myosin-binding protein C, SLOW-type;	97.64
1sy6_A	204	T-cell surface glycoprotein CD3 gamma/epsilon chai	97.62
2edf_A	103	Obscurin; beta-sandwich, IG-fold, structural genom	97.62
2eo1_A	102	OBSCN protein, cDNA FLJ14124 FIS, clone mamma10024	97.6
3so5_A	112	LIG-3, leucine-rich repeats and immunoglobulin-lik	97.58
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	97.55
2dm7_A	108	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	97.55
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	97.55
3s35_X	122	Vascular endothelial growth factor receptor 2; ant	97.54
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	97.52
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	97.51
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	97.51
2xot_A	361	Amphoterin-induced protein 1; cell adhesion, neuro	97.49
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	97.49
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	97.48
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	97.48
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	97.47
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	97.47
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	97.47
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	97.47
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	97.47
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	97.46
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	97.46
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	97.46
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	97.42
2cr6_A	115	KIAA1556 protein, obscurin; IG-fold, immunoglobuli	97.41
1z9m_A	145	GAPA225; nectin-like, IG-like domain, V domain, ce	97.41
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	97.4
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	97.4
3zyj_A	440	Leucine-rich repeat-containing protein 4C; cell ad	97.4
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	97.39
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	97.38
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	97.35
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	97.34
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	97.34
3r08_E	82	T-cell surface glycoprotein CD3 epsilon chain; ant	97.34
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	97.34
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	97.33
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	97.32
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	97.32
2edh_A	113	Obscurin; structural genomics, NPPSFA, national pr	97.31
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	97.31
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	97.31
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	97.31
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	97.29
2cpc_A	113	KIAA0657 protein; immunoglobulin domain, IG domain	97.26
3zyi_A	452	Leucine-rich repeat-containing protein 4; cell adh	97.25
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	97.25
1jhl_L	108	IGG1-kappa D11.15 FV (light chain); complex(antibo	97.24
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	97.23
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	97.23
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	97.22
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	97.2
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	97.2
2qsq_A	111	Carcinoembryonic antigen-related cell adhesion MO;	97.18
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	97.18
2e6q_A	112	Obscurin-like protein 1; IG-like domain, structura	97.17
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	97.17
1ugn_A	198	LIR1, leukocyte immunoglobulin-like receptor 1; im	97.16
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	97.16
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	97.15
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	97.14
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	97.1
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	97.1
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	97.09
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	97.09
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	97.08
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	97.07
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	97.07
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	97.06
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	97.06
3d9a_L	213	Light chain of hyhel10 antibody fragment (FAB); ly	97.05
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	97.04
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	97.01
1ccz_A	171	Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.8	97.0
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	97.0
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	97.0
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	97.0
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	96.99
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	96.98
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	96.98
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	96.98
3r06_A	213	Anti-mouse CD3epsilon antibody 2C11 FAB light CHA;	96.97
1jbj_A	186	CD3 epsilon and gamma ectodomain fragment complex;	96.97
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	96.96
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	96.95
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	96.95
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	96.94
3nl4_L	213	Antigen binding fragment, immunoglobulin IGG - LI;	96.93
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	96.92
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	96.91
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	96.91
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	96.9
1lk3_L	210	9D7 light chain; antigen-antibody complex, immune	96.9
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	96.89
1gsm_A	210	Madcam-1, mucosal addressin cell adhesion molecule	96.89
1eaj_A	126	Coxsackie virus and adenovirus receptor; virus/vir	96.88
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	96.87
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	96.87
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	96.87
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	96.86
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	96.85
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	96.82
3khq_A	133	B-cell antigen receptor complex-associated protei	96.81
3esu_F	250	Antibody 14B7* light chain and antibody 14B7* heav	96.8
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	96.79
2d3v_A	196	Leukocyte immunoglobulin-like receptor subfamily A	96.78
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	96.78
1jbj_A	186	CD3 epsilon and gamma ectodomain fragment complex;	96.78
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	96.77
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	96.76
2gi7_A	184	GPVI protein; IG-like domains, blood clotting, cel	96.76
1h5b_A	113	Murine T cell receptor (TCR) valpha domain; immune	96.76
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	96.75
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	96.75
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	96.74
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	96.74
1qfw_M	108	FV, antibody (anti beta subunit) (light chain); gl	96.74
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	96.74
2oyp_A	109	Hepatitis A virus cellular receptor 2; TIM-3, T-ce	96.74
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	96.73
4fa8_A	203	Secreted protein BARF1; immunoglobulin-like domain	96.73
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	96.73
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	96.73
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	96.72
1xau_A	122	B- and T-lymphocyte attenuator; IG domain, beta sa	96.72
4f80_A	226	Butyrophilin subfamily 3 member A1; B7 superfamily	96.72
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	96.72
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	96.71
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	96.71
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	96.7
3p2t_A	196	Leukocyte immunoglobulin-like receptor subfamily 4	96.7
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	96.69
3mj8_L	213	Stimulatory hamster antibody HL4E10 FAB light CHA;	96.68
4i0k_A	222	CD276 antigen; immunoglobulin domain, glycoprotein	96.68
4hwn_A	108	FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG	96.67
3udw_C	118	Poliovirus receptor; PVR tigit IGSF signal transdu	96.66
3q0h_A	117	T cell immunoreceptor with IG and ITIM domains; im	96.66
3sob_L	237	Antibody light chain; beta propeller, protein bind	96.65
2q20_A	109	VK1 O18/O8 germline light chain variable domain; A	96.65
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	96.65
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	96.64
2if7_A	193	SLAM family member 6; NTB-A, homophilic receptor,	96.64
2ptt_A	110	CD48 antigen; CD244, CD48, NK cell receptor, X-RAY	96.63
1i8k_A	107	Epidermal growth factor receptor antibody MR1SCFV	96.62
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	96.62
1mqk_L	120	Antibody 7E2 FV fragment, light chain; membrane pr	96.61
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	96.61
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	96.6
2c1o_A	254	IGK-C protein; FAB fragment, enantioselective, fin	96.6
1uct_A	218	Immunoglobulin alpha FC receptor; beta stands, imm	96.59
3umt_A	256	SCFV heavy chain and light chain; stability engine	96.59
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	96.59
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	96.59
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	96.58
1oll_A	188	NK receptor; immune system/receptor, NK cell trigg	96.57
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	96.56
3p2t_A	196	Leukocyte immunoglobulin-like receptor subfamily 4	96.55
1moe_A	240	Anti-CEA MAB T84.66; anti carcinoembryonic antigen	96.55
2ghw_B	247	Anti-SARS SCFV antibody, 80R; S protein, neutraliz	96.53
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	96.51
3bkj_L	252	WO2 IGG2A FAB fragment light chain kappa; abeta, F	96.51
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	96.5
3auv_A	276	SC-DSFV derived from the G6-FAB; SC-DSFV (disulfid	96.5
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	96.48
2znx_A	242	SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, s	96.47
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	96.46
4frw_A	218	Poliovirus receptor-related protein 4; immunoglobu	96.45
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	96.45
1q0x_L	212	FAB 9B1, light chain; anti-morphine antibody, FAB	96.45
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	96.44
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	96.43
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	96.42
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	96.42
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	96.41
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	96.41
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	96.39
1dr9_A	201	B7-1 (CD80), T lymphocyte activation antigen; IG s	96.39
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	96.38
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	96.37
2gi7_A	184	GPVI protein; IG-like domains, blood clotting, cel	96.36
1pko_A	139	Myelin oligodendrocyte glycoprotein; IGV-domain, i	96.34
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	96.34
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	96.33
1f3r_B	257	FV antibody fragment; IG-fold, immuno complex, ant	96.33
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	96.33
1xt5_A	135	Variable region-containing chitin-binding protein	96.32
1uct_A	218	Immunoglobulin alpha FC receptor; beta stands, imm	96.3
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	96.3
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	96.3
2dru_A	180	Chimera of CD48 antigen and T-cell surface antige;	96.29
4gos_A	125	V-SET domain-containing T-cell activation inhibit;	96.28
2ywz_A	111	NEW antigen receptor variable domain; IG VNAR, imm	96.28
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	96.28
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	96.27
2e27_L	119	Anti-ciguatoxin antibody, light chain; immunoglobu	96.27
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	96.25
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	96.24
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	96.24
3r0n_A	128	Poliovirus receptor-related protein 2; IG-domain,	96.24
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	96.23
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	96.23
1i3g_L	111	Antibody FV fragment; antibiotic; 2.44A {Mus muscu	96.23
3o3u_N	581	Maltose-binding periplasmic protein, advanced Gly	96.22
3s96_B	218	3B5H10 FAB light chain; huntingtin, immune system;	96.22
2d3v_A	196	Leukocyte immunoglobulin-like receptor subfamily A	96.21
4dzb_B	246	Vbeta2 (MAIT T cell receptor); immune system; 1.70	96.16
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	96.15
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	96.14
3juy_B	256	3B3 single chain variant HIV-1 antibody; envelope	96.11
3bqu_C	233	3H6 FAB light chain; beta sheet, immune system; 3.	96.1
1dr9_A	201	B7-1 (CD80), T lymphocyte activation antigen; IG s	96.09
1svz_A	247	Immunoglobulin;, single-chain FV fragment 1696; an	96.08
1j05_L	111	T84.66 antibody, anti-CEA MAB T84.66, light chain;	96.06
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	96.06
1f3r_B	257	FV antibody fragment; IG-fold, immuno complex, ant	96.06
2pet_A	231	Lutheran blood group glycoprotein; immunoglobulin	96.04
4fmk_A	225	Poliovirus receptor-related protein 2; immunoglobu	96.04
2or8_A	116	Hepatitis A virus cellular receptor 1 homolog; bet	96.01
3nfj_J	245	T cell receptor beta chain; immunoglobulin family,	96.01
3eow_R	221	Poliovirus receptor; immunoglobulin super family,	96.0
2zg1_A	214	Sialic acid-binding IG-like lectin 5; siglec-5 inh	96.0
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	95.99
2p1y_A	238	Bispecific alpha/beta TCR; autoimmunity, immunoglo	95.97
1eeq_A	114	Kappa-4 immunoglobulin (light chain); protein stab	95.96
2xzc_L	216	FAB A.17 light chain; immune system; HET: XOP; 1.3	95.96
1ugn_A	198	LIR1, leukocyte immunoglobulin-like receptor 1; im	95.95
2p1y_A	238	Bispecific alpha/beta TCR; autoimmunity, immunoglo	95.94
1qok_A	282	MFE-23 recombinant antibody fragment; immunoglobul	95.92
3uzq_A	253	Anti-dengue MAB 4E11; dengue antibody neutralizati	95.92
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	95.9
3auv_A	276	SC-DSFV derived from the G6-FAB; SC-DSFV (disulfid	95.9
2ghw_B	247	Anti-SARS SCFV antibody, 80R; S protein, neutraliz	95.89
1nqb_A	256	Single-chain antibody fragment; multivalent antibo	95.88
1nqb_A	256	Single-chain antibody fragment; multivalent antibo	95.88
1neu_A	124	Myelin P0 protein; structural protein, glycoprotei	95.87
2pet_A	231	Lutheran blood group glycoprotein; immunoglobulin	95.84
2yc1_B	146	Single chain antibody fragment 9004G; immune syste	95.84
4i0k_A	222	CD276 antigen; immunoglobulin domain, glycoprotein	95.81
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	95.81
2zg1_A	214	Sialic acid-binding IG-like lectin 5; siglec-5 inh	95.8
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	95.8
3d9a_H	210	Heavy chain of hyhel10 antibody fragment (FAB); ly	95.79
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	95.79
3uzq_A	253	Anti-dengue MAB 4E11; dengue antibody neutralizati	95.78
3tv3_L	211	PGT128 light chain, IG lambda-2 chain C regions; F	95.77
2coq_A	108	NEW antigen receptor variable domain; IG VNAR, nat	95.77
3tf7_C	256	42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE;	95.75
1u3h_A	110	T-cell receptor alpha-chain; complex, immune syste	94.74
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	95.75
4ffy_L	126	DENV1-E111 single chain variable fragment (light;	95.75
2gjj_A	264	A21 single-chain antibody fragment against ERBB2;	95.74
2edo_A	121	CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte	95.73
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	95.7
4f80_A	226	Butyrophilin subfamily 3 member A1; B7 superfamily	95.67
1pz5_B	220	Heavy chain of FAB (SYA/J6); antibody-antigen stru	95.67
1oll_A	188	NK receptor; immune system/receptor, NK cell trigg	95.67
2jju_A	127	Signal regulatory protein beta-1; immunoglobulin d	95.66
1sq2_N	113	Novel antigen receptor; immunoglobulin fold, prote	95.66
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	95.63
1q9r_B	222	S25-2 FAB (IGG1K) heavy chain; antigen-binding fra	95.63
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	95.62
3pv7_A	248	B7-H6, IG-like domain-containing protein DKFZP686O	95.62
2vsd_A	105	CHIR AB1; immune system receptor, FC receptor; HET	95.62
2q87_A	110	CMRF35-H antigen; all-beta, immunoglobulin, IG-sup	95.61
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	95.59
1sy6_A	204	T-cell surface glycoprotein CD3 gamma/epsilon chai	95.59
1mju_H	227	Immunoglobulin MS6-12; catalytic antibody, ester h	95.55
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	95.54
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	95.5
1dlf_L	113	Anti-dansyl immunoglobulin IGG2A(S); FV fragment;	95.5
1nfd_E	212	H57 FAB; complex (immunoreceptor-immunoglobulin),	95.49
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	95.48
3juy_B	256	3B3 single chain variant HIV-1 antibody; envelope	95.47
3umt_A	256	SCFV heavy chain and light chain; stability engine	95.45
1pew_A	109	JTO2, A lambda-6 type immunoglobulin light chain,	95.43
3esu_F	250	Antibody 14B7* light chain and antibody 14B7* heav	95.42
1x9q_A	268	SCFV, 4M5.3 anti-fluorescein single chain antibody	95.41
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	95.38
4gjt_B	123	Poliovirus receptor-related protein 4; six-bladed	95.38
1za6_B	344	IGG heavy chain; immunoglobulin fold, CH2-domain-d	95.36
1ncn_A	110	T lymphocyte activation antigen CD86; IG V, beta s	95.31
4ei6_B	245	Vbeta16 XV19 type II natural killer T cell recept	95.31
1c1e_H	219	Catalytic antibody 1E9 (heavy chain); diels-alder,	95.26
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	95.25
2j6e_L	234	IGM, FAB light chain; autoimmune complex human IGM	95.21
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	95.2
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	95.19
2fbj_H	220	IGA-kappa J539 FAB (heavy chain); immunoglobulin;	95.18
1qok_A	282	MFE-23 recombinant antibody fragment; immunoglobul	95.16
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	95.14
1olz_A	663	Semaphorin 4D; developmental protein, CD100, beta-	95.13
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	95.1
3ux9_B	256	SCFV antibody; five helices, long loop connecting	95.09
1zox_A	113	CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid I	95.07
1op3_H	225	FAB 2G12, heavy chain; domain-swapped FAB 2G12, an	95.06
2or7_A	115	T-cell immunoglobulin and mucin domain- containing	95.04
1p6f_A	242	NKP46, natural cytotoxicity triggering receptor 1;	95.03
3ux9_B	256	SCFV antibody; five helices, long loop connecting	95.03
1nkr_A	201	P58-CL42 KIR; inhibitory receptor, natural killer	95.01
3noi_A	120	Natural cytotoxicity triggering receptor 3; immune	94.98
3pl6_D	268	MBP peptide / T-cell receptor beta chain chimera;	94.94
3nl4_L	213	Antigen binding fragment, immunoglobulin IGG - LI;	94.93
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	94.92
1nfd_E	212	H57 FAB; complex (immunoreceptor-immunoglobulin),	94.91
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	94.91
1q9r_B	222	S25-2 FAB (IGG1K) heavy chain; antigen-binding fra	94.9
1c1e_H	219	Catalytic antibody 1E9 (heavy chain); diels-alder,	94.9
2d9c_A	136	Signal-regulatory protein beta-1; beta-sandwich, S	94.89
2qhl_A	111	Novel immune-type receptor 10; immunoglobulin vari	94.88
2aw2_A	120	B and T lymphocyte attenuator; IGI domain, IGG dom	94.88
1nkr_A	201	P58-CL42 KIR; inhibitory receptor, natural killer	94.88
3gkz_A	257	Anti-methamphetamine single chain FV; therapeutic	94.88
3q5y_A	240	TCR N15 beta; IG, T cell receptor, antigen peptide	94.88
2znx_A	242	SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, s	94.86
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	94.86
3d9a_L	213	Light chain of hyhel10 antibody fragment (FAB); ly	94.84
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	94.83
3gkz_A	257	Anti-methamphetamine single chain FV; therapeutic	94.81
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	94.76
3fku_X	280	Neutralizing antibody F10; influenza, hemagglutini	94.75
3mj8_L	213	Stimulatory hamster antibody HL4E10 FAB light CHA;	94.74
3omz_A	259	Human vdelta1 gamma delta T cell receptor delta1A;	94.73
2yz1_A	120	Tyrosine-protein phosphatase non-receptor type sub	94.72
3moq_A	126	NEW antigen receptor variable domain, P3(40) PEPT	94.71
2gki_A	291	Nuclease; anti-DNA antibody, catalytic antibody, i	94.67
1b6u_A	257	KIR2DL3, P58 killer cell inhibitory receptor; natu	94.64
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	94.6
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	94.59
2fbj_H	220	IGA-kappa J539 FAB (heavy chain); immunoglobulin;	94.57
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	94.55
3bj9_1	116	Immunoglobulin IOTA chain, immunoglobulin lambda-	94.54
2if7_A	193	SLAM family member 6; NTB-A, homophilic receptor,	94.54
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	94.53
3bae_H	228	WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO	94.52
2w59_A	231	IGY FCU3-4; immunoglobulin, avian, immune system;	94.52
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	94.51
3u6r_L	143	Antibody 1:7 (light chain); IG-like domain, neutra	94.44
1fo0_B	112	Protein (BM3.3 T cell receptor beta-chain); class	94.4
1svz_A	247	Immunoglobulin;, single-chain FV fragment 1696; an	94.37
3to4_D	253	NKT vbeta2 (mouse variable domain, human constant;	94.35
1nko_A	132	Sialic acid binding IG-like lectin 7; immunoglobul	94.34
1pz5_B	220	Heavy chain of FAB (SYA/J6); antibody-antigen stru	94.34
1c5d_H	215	Monoclonal antibody against the main immunogenic t	94.34
1dee_B	223	IGM RF 2A2; FAB-IBP complex 2.7A resolution bindin	94.3
2wbj_D	279	OB TCR; transmembrane, immune response, T cell rec	94.3
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	94.29
3rrq_A	129	Protein PD-1, programmed cell death protein 1; pro	94.28
1oaq_L	120	Light chain; antibody, allergy, IGE, conformationa	94.26
4frw_A	218	Poliovirus receptor-related protein 4; immunoglobu	94.21
1moe_A	240	Anti-CEA MAB T84.66; anti carcinoembryonic antigen	94.17
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	94.17
3tf7_C	256	42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE;	94.15
3pv7_A	248	B7-H6, IG-like domain-containing protein DKFZP686O	94.13
2xqy_G	261	A13-D6.3 monoclonal antibody, envelope glycoprotei	94.0
2gjj_A	264	A21 single-chain antibody fragment against ERBB2;	93.96
1p4b_L	135	Antibody variable light chain; FV antibody, antige	93.92
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	93.91
2rgs_A	218	I, IG gamma-2B heavy chain; FC-fragment, immunoglo	93.9
2atp_B	115	T-cell surface glycoprotein CD8 beta chain; CD8AB,	93.86
3m8o_H	221	Immunoglobulin A1 heavy chain; immunoglobulin fold	93.83
1dn0_B	232	IGM-kappa cold agglutinin (heavy chain); FAB, anti	93.83
1lk3_L	210	9D7 light chain; antigen-antibody complex, immune	93.8
1tvd_A	116	T cell receptor, ES204 V delta; immunoreceptor, TC	93.79
1igy_B	434	IGG1 intact antibody MAB61.1.3; intact immunoglobu	93.74
2z35_A	112	T-cell receptor alpha-chain; immune receptor, immu	93.71
1hxm_B	242	Gamma-delta T-cell receptor; IG domain, TCR, GDTCR	93.69
3eow_R	221	Poliovirus receptor; immunoglobulin super family,	93.67
2vol_A	207	Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry,	93.66
3nl4_H	215	Antigen binding fragment,immunoglobulin IGG - HEA;	93.64
2xzc_L	216	FAB A.17 light chain; immune system; HET: XOP; 1.3	93.56
1fo0_A	116	Protein (BM3.3 T cell receptor alpha-chain); class	93.56
3nl4_H	215	Antigen binding fragment,immunoglobulin IGG - HEA;	93.55
1u9k_A	114	Triggering receptor expressed on myeloid cells 1;	93.53
3d9a_H	210	Heavy chain of hyhel10 antibody fragment (FAB); ly	93.5
3fku_X	280	Neutralizing antibody F10; influenza, hemagglutini	93.47
3bn9_D	257	E2 FAB heavy chain; antibody-protease complex, pro	93.46
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	93.42
2i24_N	121	NEW antigen receptor PBLA8; immunoglobulin fold, i	93.42
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	93.41
1hzh_H	457	IGG, immunoglobulin heavy chain; antibody, immune	93.39
1x9q_A	268	SCFV, 4M5.3 anti-fluorescein single chain antibody	93.34
3liz_H	253	4C3 monoclonal antibody heavy chain; hydrolase-imm	93.16
1ypz_E	207	T cell receptor delta, beta-2-microglobulin; H2-T2	93.15
1sjv_A	114	R9; camelids antibody, domain swapping, heavy chai	93.15
1ypz_F	230	T-cell receptor gamma chain, beta-2-microglobulin;	93.09

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus}

Probab=99.95  E-value=7e-28  Score=217.96  Aligned_cols=122  Identities=33%  Similarity=0.756  Sum_probs=103.4

Q ss_pred             eecCCCCCCcccccceeeeecccceeeeeeCCCCceeeeccCCCCCCCCCcCChHHHHHHhhcCCCCCCCCCCCCCccCc
Q psy10163        410 VCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP  489 (615)
Q Consensus       410 ~C~a~n~~G~p~~~~~~l~V~~~~~~wyyd~~~~~C~~F~y~gC~gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~  489 (615)
                      +|....+.|.         +++...+||||..+++|+.|+|+||+||.|+|.|+++|+++|.......++.         
T Consensus         5 ~C~~p~~~G~---------C~~~~~r~~yn~~t~~C~~F~y~GC~gN~N~F~t~~~C~~~C~~~~~~~~~~---------   66 (127)
T 2ody_E            5 FCRLPADEGI---------CKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPERVNDFE---------   66 (127)
T ss_dssp             GGGSCCCCCS---------SCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHHSSCCCCCCCC---------
T ss_pred             cccCCCCCcc---------CcCceeeEEEECCCCeeeEeecCCcCCCccccCcHHHHHHhccccccccccc---------
Confidence            3555555554         6677899999999999999999999999999999999999998653211100         


Q ss_pred             cccccCCCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       490 ~~~~~~~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                        .....++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus        67 --~~~~~~~C~~p~~~G~C~~~~~r~~yd~~~~~C~~F~Y~GC~GN~N~F~t~~eC~~~C~~  126 (127)
T 2ody_E           67 --SADFKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVCKN  126 (127)
T ss_dssp             --CCCHHHHTSSCCCCCSSCCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHSC
T ss_pred             --cCCcCCcCCCcCCCCcccCcceeEEECCCCCceeEEEECCcCCCCcCcCCHHHHHHHccC
Confidence              011236899999999999999999999999999999999999999999999999999975

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1

Probab=99.94  E-value=2.2e-27  Score=219.52  Aligned_cols=112  Identities=35%  Similarity=0.797  Sum_probs=101.4

Q ss_pred             eecCCCCCCcccccceeeeecccceeeeeeCCCCceeeeccCCCCCCCCCcCChHHHHHHhhcCCCCCCCCCCCCCccCc
Q psy10163        410 VCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAP  489 (615)
Q Consensus       410 ~C~a~n~~G~p~~~~~~l~V~~~~~~wyyd~~~~~C~~F~y~gC~gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~  489 (615)
                      +|....+.|.         +++...|||||..+++|+.|.|+||+||.|+|.|+++|+++|...                
T Consensus        25 ~C~~p~~~G~---------C~~~~~r~~yn~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~e----------------   79 (147)
T 1bik_A           25 SCQLGYSAGP---------CMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTV----------------   79 (147)
T ss_dssp             CTTSCCCCCS---------CCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCCG----------------
T ss_pred             cCcCCCCCCC---------CCCCeeEEEEECCCCeeEEeEcCCccCCCCccccccccccccCcc----------------
Confidence            4665555554         677789999999999999999999999999999999999999852                


Q ss_pred             cccccCCCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCc
Q psy10163        490 RQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       490 ~~~~~~~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                             ++|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|....
T Consensus        80 -------~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~~~  136 (147)
T 1bik_A           80 -------AACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGVPG  136 (147)
T ss_dssp             -------GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCC--
T ss_pred             -------ccccCccccccccccceEEEecccCCcceEEEECCccCCccCcCCHHHHHHHCcCCC
Confidence                   579999999999999999999999999999999999999999999999999998754

>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus}

Probab=99.91  E-value=2e-25  Score=201.81  Aligned_cols=112  Identities=29%  Similarity=0.558  Sum_probs=97.7

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCcccCCCCCCcccccccccCCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPP  123 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~~v~~pp  123 (615)
                      .+++|.||++.|.|.++++|||||..+++|+.|+|+||+||.|||.|+++|+++|.......          +     + 
T Consensus         2 ~~~~C~~p~~~G~C~~~~~r~~yn~~t~~C~~F~y~GC~gN~N~F~t~~~C~~~C~~~~~~~----------~-----~-   65 (127)
T 2ody_E            2 RNGFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPERVN----------D-----F-   65 (127)
T ss_dssp             CBGGGGSCCCCCSSCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHHSSCCCCC----------C-----C-
T ss_pred             CCCcccCCCCCccCcCceeeEEEECCCCeeeEeecCCcCCCccccCcHHHHHHhcccccccc----------c-----c-
Confidence            35789999999999999999999999999999999999999999999999999998643100          0     0 


Q ss_pred             ccCCCCCCccccccCceeeeeeccCCCCCCceeccCCCccccceecccCCCCCcccCCCCccCCcccccceEeecCCCcc
Q psy10163        124 RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFIT  203 (615)
Q Consensus       124 ~~~~~~~C~~~~~~g~~v~l~C~~~~~p~p~~~~~~~~~~C~~~~~~~~~~~~~C~~p~~~G~C~~~~~r~yfd~~~~~C  203 (615)
                                   +                                 .....++|.||.+.|+|.+.+.|||||+.+++|
T Consensus        66 -------------~---------------------------------~~~~~~~C~~p~~~G~C~~~~~r~~yd~~~~~C   99 (127)
T 2ody_E           66 -------------E---------------------------------SADFKTGCEPAADSGSCAGQLERWFYNVQSGEC   99 (127)
T ss_dssp             -------------C---------------------------------CCCHHHHTSSCCCCCSSCCCEEEEEEETTTTEE
T ss_pred             -------------c---------------------------------cCCcCCcCCCcCCCCcccCcceeEEECCCCCce
Confidence                         0                                 002347899999999999999999999999999


Q ss_pred             ccccC----CCCccccch
Q psy10163        204 MPELT----PNTFLFQWT  217 (615)
Q Consensus       204 ~~f~~----gN~NnF~s~  217 (615)
                      ++|+|    ||.|||.|+
T Consensus       100 ~~F~Y~GC~GN~N~F~t~  117 (127)
T 2ody_E          100 ETFVYGGCGGNDNNYESE  117 (127)
T ss_dssp             EEEEECSSCCCSCCBSSH
T ss_pred             eEEEECCcCCCCcCcCCH
Confidence            99998    599999999

>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1

Probab=99.90  E-value=7.3e-25  Score=202.64  Aligned_cols=101  Identities=30%  Similarity=0.527  Sum_probs=92.7

Q ss_pred             cCCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCcccCCCCCCcccccccccCCC
Q psy10163         43 IAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASP  122 (615)
Q Consensus        43 ~~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~~v~~p  122 (615)
                      ..+++|.+|++.|.|.+.++|||||..+++|+.|+|+||+||.|||.|+++|+++|..                      
T Consensus        21 ~~~~~C~~p~~~G~C~~~~~r~~yn~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~----------------------   78 (147)
T 1bik_A           21 KKEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRT----------------------   78 (147)
T ss_dssp             ----CTTSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCC----------------------
T ss_pred             CCCccCcCCCCCCCCCCCeeEEEEECCCCeeEEeEcCCccCCCCccccccccccccCc----------------------
Confidence            3578999999999999999999999999999999999999999999999999999953                      


Q ss_pred             CccCCCCCCccccccCceeeeeeccCCCCCCceeccCCCccccceecccCCCCCcccCCCCccCCcccccceEeecCCCc
Q psy10163        123 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSRKFFLRGFISANDLCFLESESGPCTQQEAAWYFDRNSFI  202 (615)
Q Consensus       123 p~~~~~~~C~~~~~~g~~v~l~C~~~~~p~p~~~~~~~~~~C~~~~~~~~~~~~~C~~p~~~G~C~~~~~r~yfd~~~~~  202 (615)
                                                                          .++|.+|.+.|+|.+...|||||+.+++
T Consensus        79 ----------------------------------------------------e~~C~~p~~~G~C~~~~~r~yyd~~~~~  106 (147)
T 1bik_A           79 ----------------------------------------------------VAACNLPIVRGPCRAFIQLWAFDAVKGK  106 (147)
T ss_dssp             ----------------------------------------------------GGGGGSCCCCCSCCCCEEEEEEETTTTE
T ss_pred             ----------------------------------------------------cccccCccccccccccceEEEecccCCc
Confidence                                                                2578999999999999999999999999


Q ss_pred             cccccC----CCCccccch
Q psy10163        203 TMPELT----PNTFLFQWT  217 (615)
Q Consensus       203 C~~f~~----gN~NnF~s~  217 (615)
                      |++|+|    ||.|||.|+
T Consensus       107 C~~F~YgGC~GN~NnF~t~  125 (147)
T 1bik_A          107 CVLFPYGGCQGNGNKFYSE  125 (147)
T ss_dssp             EEEEEECSSSCCSCCBSSH
T ss_pred             ceEEEECCccCCccCcCCH
Confidence            999998    599999999

>1toc_R Ornithodorin; vitamin K, zymogen, gamma-carboxyglutamic acid, acute phase, liver, hydrolase, serine protease kunitz-like inhibitor, kringle; 3.10A {Ornithodoros moubata} SCOP: g.8.1.2 g.8.1.2

Probab=99.78  E-value=3.2e-19  Score=159.35  Aligned_cols=99  Identities=19%  Similarity=0.557  Sum_probs=83.1

Q ss_pred             cceeeeeeCCCCceeeeccCCCCCCCCCcCChHHHHHHhhcCCCCCCCCCCCCCccCccccccCCCCccccCcCCCCCCC
Q psy10163        432 NYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAARNDLCFLESESGPCTQQ  511 (615)
Q Consensus       432 ~~~~wyyd~~~~~C~~F~y~gC~gn~N~F~t~~~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~g~C~~~  511 (615)
                      ...+|||+.  ++|+.|.  +|.  .|+|.|+++|+++|......      +.        ....++|.||++.| |.+.
T Consensus        19 ~~~~~~~~~--~~C~~~~--~C~--~N~F~t~~eC~~~C~~~~~~------~~--------~~~~~~C~lp~~~G-C~~~   77 (120)
T 1toc_R           19 QVDRYFREG--TTCLMSP--ACT--SEGYASQHECQQACFVGGED------HS--------SEMHSSCLGDPPTS-CAEG   77 (120)
T ss_dssp             EEEEEEEET--TEEEEEE--EET--TSSBSSHHHHHHHSSCCCCS------CC--------CCCCGGGGSCCCBC-CTTC
T ss_pred             ccceEeecC--CcceecC--ccC--CCCcCCHHHHHhHhcccccc------cc--------cccCcccCCCCCCC-ccCC
Confidence            356788885  4899985  687  79999999999999864210      00        01247899999999 9999


Q ss_pred             CceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        512 EAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       512 ~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      +.|||||+.+++|+.|+ +||+||.|+|.|+++|+++|...
T Consensus        78 ~~rwyyd~~~~~C~~F~-gGC~GN~NnF~t~~eC~~~C~~~  117 (120)
T 1toc_R           78 TDITYYDSDSKTCKVLA-ASCPSGENTFESEVECQVACGAP  117 (120)
T ss_dssp             EEEEEEETTTTEEEEEE-EEBCSSSCCBSSHHHHHHHTTCC
T ss_pred             cceEEEECCCCeeeecC-CCcCCCCcCcCCHHHHHHHccCC
Confidence            99999999999999999 99999999999999999999863

>1toc_R Ornithodorin; vitamin K, zymogen, gamma-carboxyglutamic acid, acute phase, liver, hydrolase, serine protease kunitz-like inhibitor, kringle; 3.10A {Ornithodoros moubata} SCOP: g.8.1.2 g.8.1.2

Probab=99.72  E-value=7.8e-18  Score=150.30  Aligned_cols=88  Identities=26%  Similarity=0.545  Sum_probs=75.7

Q ss_pred             CcccccCCccccCCCC--CceeEEeCCCCCcccCc--------------------------cCCCcccCCCccCCCCCCe
Q psy10163         10 AKDICLQPAVIGDCAN--YVLTWYYDSNTSCFPQF--------------------------IAKDICLQPAVIGDCANYV   61 (615)
Q Consensus        10 ~~~~C~~p~~~g~C~~--~~~~w~yd~~~~C~~f~--------------------------~~~~~C~~~~~~G~C~~~~   61 (615)
                      +...|++|... +|.+  .+.+|||+.. +|..|.                          ..+++|.||++.| |.+.+
T Consensus         2 ~~~~C~~P~~~-~C~~~~~~~~~~~~~~-~C~~~~~C~~N~F~t~~eC~~~C~~~~~~~~~~~~~~C~lp~~~G-C~~~~   78 (120)
T 1toc_R            2 LNVLCNNPHTA-DCNNDAQVDRYFREGT-TCLMSPACTSEGYASQHECQQACFVGGEDHSSEMHSSCLGDPPTS-CAEGT   78 (120)
T ss_dssp             EEGGGSCCCCS-CCTTSCEEEEEEEETT-EEEEEEEETTSSBSSHHHHHHHSSCCCCSCCCCCCGGGGSCCCBC-CTTCE
T ss_pred             ccCcccCCCCC-CCCCCCccceEeecCC-cceecCccCCCCcCCHHHHHhHhcccccccccccCcccCCCCCCC-ccCCc
Confidence            46789988877 9974  5889999854 454432                          1368999999999 99999


Q ss_pred             eeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         62 LTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        62 ~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      +|||||+.+++|+.|+ +||+||.|||.|+++|+++|...
T Consensus        79 ~rwyyd~~~~~C~~F~-gGC~GN~NnF~t~~eC~~~C~~~  117 (120)
T 1toc_R           79 DITYYDSDSKTCKVLA-ASCPSGENTFESEVECQVACGAP  117 (120)
T ss_dssp             EEEEEETTTTEEEEEE-EEBCSSSCCBSSHHHHHHHTTCC
T ss_pred             ceEEEECCCCeeeecC-CCcCCCCcCcCCHHHHHHHccCC
Confidence            9999999999999999 99999999999999999999764

>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1

Probab=99.71  E-value=7.8e-18  Score=130.25  Aligned_cols=55  Identities=38%  Similarity=0.859  Sum_probs=53.2

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .++|.+|++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|.
T Consensus         2 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~   56 (57)
T 1dtk_A            2 AKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV   56 (57)
T ss_dssp             CGGGGCCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             cccccCCCCCccCCCCcceEEEcCCCCcCcEEEcCCcCCCCCCcCCHHHHHHHcc
Confidence            5789999999999999999999999999999999999999999999999999996

>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A

Probab=99.71  E-value=8.6e-18  Score=130.48  Aligned_cols=56  Identities=27%  Similarity=0.656  Sum_probs=53.8

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      +++|.+|++.|.|.+.++|||||..+++|++|+|+||+||.|||.|+++|+++|..
T Consensus         2 ~~~C~~p~~~G~C~~~~~rw~yn~~~~~C~~F~ygGC~gN~NnF~t~~~C~~~C~~   57 (58)
T 3aub_A            2 PAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAA   57 (58)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSC
T ss_pred             CCcCcCCCCCCCCCCCeeeEEEECCCCceeEEecCCcCCCCcCcCCHHHHHHHccc
Confidence            57899999999999999999999999999999999999999999999999999964

>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A

Probab=99.71  E-value=1.1e-17  Score=134.44  Aligned_cols=59  Identities=41%  Similarity=0.911  Sum_probs=55.9

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      .+++|.||++.|+|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|....
T Consensus         6 ~~~~C~lp~~~G~C~~~~~rwyYd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~~~   64 (70)
T 2ddi_A            6 FTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVVD   64 (70)
T ss_dssp             SCCGGGSCCCCCSCSSCEEEEEEEGGGTEEEEEEECSSSCCSCCBSSHHHHHHHSCCCC
T ss_pred             cCCcCcCCCCCccCCCCeeEEEEECCCCeeeeeECCCcCCCCCCCCCHHHHHhHccCcC
Confidence            56899999999999999999999999999999999999999999999999999998653

>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A

Probab=99.71  E-value=9.8e-18  Score=130.18  Aligned_cols=56  Identities=45%  Similarity=1.140  Sum_probs=53.8

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .++|.||++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|..
T Consensus         2 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   57 (58)
T 1kth_A            2 TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP   57 (58)
T ss_dssp             CGGGGSCCCCCBSSCCEEEEEEETTTTEEEEEEECSBSCCSCCBSSHHHHHHHHCC
T ss_pred             CCcccCCCCCccCCCCeeeEEEcCCCCccceeecCCccCCCCCcCCHHHHHhHccC
Confidence            46899999999999999999999999999999999999999999999999999975

>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A

Probab=99.70  E-value=1.3e-17  Score=130.38  Aligned_cols=57  Identities=35%  Similarity=0.619  Sum_probs=53.9

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~~yd~~~~~C~~F~ygGC~GN~N~F~t~~eC~~~C~~   59 (60)
T 1y62_A            3 RPSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCLY   59 (60)
T ss_dssp             CCGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHC-
T ss_pred             CCCcCcCCCCCcCCCCCeeEEEEeCCCCcccEeECCCcCCCCcCcCCHHHHHhhCcC
Confidence            367899999999999999999999999999999999999999999999999999963

>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I

Probab=99.69  E-value=1.8e-17  Score=131.64  Aligned_cols=58  Identities=26%  Similarity=0.630  Sum_probs=55.2

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      +++|.+|++.|.|.+.++|||||..+++|+.|+|+||+||.|||.|+++|+++|....
T Consensus         2 p~~C~~p~~~G~C~~~~~rwyyd~~t~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~~   59 (65)
T 3aug_A            2 PAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAAG   59 (65)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSCCC
T ss_pred             CccccCCCCCCCCcCCeeEEEEECCCCeeeeEecCCcCCCccCcCCHHHHHhhCcCCC
Confidence            4789999999999999999999999999999999999999999999999999998753

>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I

Probab=99.69  E-value=1.8e-17  Score=129.25  Aligned_cols=56  Identities=45%  Similarity=0.984  Sum_probs=53.7

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .+++|.+|++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|.
T Consensus         3 ~~~~C~~p~~~G~C~~~~~rw~yn~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~   58 (59)
T 3byb_A            3 RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA   58 (59)
T ss_dssp             SCGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHC
T ss_pred             cCCcCCCCCCCCCCCCCeeEEEEECCCCEEeEEECCCcCCCCcCcCCHHHHHhHcc
Confidence            36789999999999999999999999999999999999999999999999999996

>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ...

Probab=99.69  E-value=2e-17  Score=128.49  Aligned_cols=56  Identities=36%  Similarity=0.978  Sum_probs=53.8

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      +++|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus         2 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   57 (58)
T 1g6x_A            2 PDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG   57 (58)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHCC
T ss_pred             cccccCCCCCCCCCCCeeEEEEECCCCceeEEecCCcCCCCcCcCCHHHHHhHccC
Confidence            57899999999999999999999999999999999999999999999999999974

>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E

Probab=99.69  E-value=1.8e-17  Score=128.78  Aligned_cols=57  Identities=46%  Similarity=1.104  Sum_probs=53.9

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      ++++|.+|++.|+|.+.++|||||..+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         1 v~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~~C~~~C~~   57 (58)
T 1aap_A            1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS   57 (58)
T ss_dssp             CGGGGGBCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC-
T ss_pred             CcccccCCCCCCCCcCceeeEEEECCCCeEeeeecCCcCCCCCCcCCHHHHHHHccC
Confidence            357899999999999999999999999999999999999999999999999999964

>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C

Probab=99.69  E-value=2e-17  Score=131.38  Aligned_cols=58  Identities=38%  Similarity=0.883  Sum_probs=55.4

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      .+++|.||++.|+|.+.++|||||..+++|++|+|+||+||.|||.|+++|+++|...
T Consensus         3 ~p~~C~lp~~~G~C~~~~~rwyyd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~~~~~   60 (66)
T 4dtg_K            3 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG   60 (66)
T ss_dssp             CCGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSSC
T ss_pred             CCCcccCCCCCCCccCceeEEEEECCCCCEEeeEcCCCCCCCCCCCCHHHHHHHHhcc
Confidence            4689999999999999999999999999999999999999999999999999999764

>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A

Probab=99.69  E-value=2.3e-17  Score=128.63  Aligned_cols=56  Identities=32%  Similarity=0.856  Sum_probs=53.7

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|.
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~~yn~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~   58 (59)
T 1dtx_A            3 RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI   58 (59)
T ss_dssp             SSGGGGSCCCCCSSSCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHT
T ss_pred             CCCcCcCCCCCccCCCCeeEEEEecCCCCCeEeecCCcCCCCcCcCCHHHHHhhcc
Confidence            36789999999999999999999999999999999999999999999999999996

>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1

Probab=99.69  E-value=1.9e-17  Score=129.95  Aligned_cols=58  Identities=34%  Similarity=0.758  Sum_probs=55.0

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|...
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~~yn~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~~   60 (61)
T 1bun_B            3 RHPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY   60 (61)
T ss_dssp             CCTTTTSCCCCCCSSSCEEEEEEEGGGTEEEEEEECSCCSSSCCBSSHHHHHHHHCCC
T ss_pred             cCCcCcCCCCCcCCCCCeeEEEEECCCCcceEEecCCcCCCccCcCCHHHHHhhcccc
Confidence            3678999999999999999999999999999999999999999999999999999753

>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} SCOP: g.8.1.1 PDB: 3ofw_A 1shp_A 3t62_D 3uou_B

Probab=99.69  E-value=3.1e-17  Score=128.77  Aligned_cols=58  Identities=43%  Similarity=0.971  Sum_probs=55.3

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      .+++|.+|++.|+|.+.++|||||..+++|++|+|+||+||.|||.|+++|+++|.+.
T Consensus         3 ~~~~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~~l   60 (61)
T 3m7q_B            3 EASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRAL   60 (61)
T ss_dssp             CCGGGGSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHSCCC
T ss_pred             cCccccCCCCCCCCcCceeEEEEECCCCcEEeEEeCCcCCCCCCCCCHHHHHhhCccc
Confidence            4679999999999999999999999999999999999999999999999999999864

>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1

Probab=99.68  E-value=3.3e-17  Score=130.16  Aligned_cols=58  Identities=40%  Similarity=0.881  Sum_probs=55.2

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      .+++|.+|++.|+|.+.++|||||..+++|+.|+|+||+||.|||.|+++|+++|...
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~   60 (65)
T 1jc6_A            3 RPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAK   60 (65)
T ss_dssp             CCCGGGSCCCCCSCCCCCCEEEEETTTTEEEEECCCSSCCCSSCBSSHHHHHHHTSCC
T ss_pred             CCCcCcCCCCCCCCCCCeeEEEEECCCCeeeeeecCCcCCCCCCcCCHHHHHhhcccc
Confidence            3678999999999999999999999999999999999999999999999999999864

>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1

Probab=99.68  E-value=2.4e-17  Score=132.88  Aligned_cols=60  Identities=37%  Similarity=0.870  Sum_probs=56.5

Q ss_pred             cCCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         43 IAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        43 ~~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      ..+++|.||++.|+|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|...+
T Consensus         9 ~~~~~C~lp~~~G~C~~~~~r~yyn~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~~~   68 (71)
T 1adz_A            9 LKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP   68 (71)
T ss_dssp             SCCGGGGSCCCCCSSCCCCCEEEEEGGGTEEEEECCCCSSCCSCCBSSHHHHHHHTTCSS
T ss_pred             cCCCcCcCCCCCCCCCCceeeEEEcCCCCccceEeeCCcCCCccCcCCHHHHHHhccccC
Confidence            357899999999999999999999999999999999999999999999999999998753

>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1

Probab=99.68  E-value=1.9e-17  Score=129.47  Aligned_cols=57  Identities=33%  Similarity=0.841  Sum_probs=54.6

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|..
T Consensus         3 ~~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   59 (60)
T 1bf0_A            3 PPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG   59 (60)
T ss_dssp             CCSGGGCCCCCCCSSCCEEEEEEETTTTEEEEEEECSTTCCSCCBSSTTTTHHHHTC
T ss_pred             CCccCCCCCCCccCCCCeeEEEEeCCCCccEEeecCCcCCCCcCcCCHHHHHHHccC
Confidence            468999999999999999999999999999999999999999999999999999974

>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1

Probab=99.68  E-value=2.5e-17  Score=129.29  Aligned_cols=57  Identities=40%  Similarity=0.902  Sum_probs=54.5

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|++|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus         4 ~~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~   60 (61)
T 1irh_A            4 GPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK   60 (61)
T ss_dssp             CCSSSSSCCCCSSSCCCCCEEEECTTTCSEEEECCCCSSCCSCCBSSSHHHHHHHTC
T ss_pred             CCccCcCCCCCcCCCCCeeEEEEeCCCCcceEEEeCCcCCCCCCcCCHHHHHhHccC
Confidence            468899999999999999999999999999999999999999999999999999974

>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1

Probab=99.68  E-value=3.1e-17  Score=129.63  Aligned_cols=58  Identities=48%  Similarity=0.979  Sum_probs=55.0

Q ss_pred             cCCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         43 IAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        43 ~~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .++++|.||++.|.|.+.++|||||..+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus         4 ~~~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   61 (63)
T 1zr0_B            4 NNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR   61 (63)
T ss_dssp             CTHHHHTSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHTSC
T ss_pred             CCCCcccCCCCCCCCCCCeeEEEEeCCCCeEEEEecCCcCCCccCcCCHHHHHhhCcC
Confidence            3567899999999999999999999999999999999999999999999999999975

>2kcr_A Anntoxin; protein; NMR {Hyla annectans}

Probab=99.67  E-value=3.6e-17  Score=128.43  Aligned_cols=56  Identities=34%  Similarity=0.697  Sum_probs=53.8

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .+++|.+|++.|.|.+.++|||||..+++|+.|+|+||+||.|||.|+++|+++|.
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~   58 (61)
T 2kcr_A            3 QDYRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCV   58 (61)
T ss_dssp             SSGGGSSCCCCCCCSSCCCEEEEETTTTEEEEECCCSSSCCSCCBSCHHHHHHHHH
T ss_pred             cCccccCCCCCccCCCCeeEEEEeCCCCcceEEEcCCcCCCCcCCCCHHHHHhhcc
Confidence            46789999999999999999999999999999999999999999999999999995

>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena}

Probab=99.67  E-value=3.3e-17  Score=125.67  Aligned_cols=53  Identities=47%  Similarity=1.064  Sum_probs=51.1

Q ss_pred             CcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        46 ~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      ++|.+|++.|+|.+.++|||||  +++|++|+|+||+||.|||.|+++|+++|..
T Consensus         2 ~~C~~p~~~G~C~~~~~r~~yd--~~~C~~F~ygGC~gN~N~F~t~~~C~~~C~~   54 (55)
T 2jot_A            2 DTCRLPSDRGRCKASFERWYFN--GRTCAKFIYGGCGGNGNKFPTQEACMKRCAK   54 (55)
T ss_dssp             CSTTSCCCCCCTTCCCEEEEEE--TTEEEEEECCSCSCSSSEESSHHHHHHHHTC
T ss_pred             CcccCCCCCccCCCCcceEEEc--CCcccEeecCCcCCCCcCCCCHHHHHHHccc
Confidence            6899999999999999999999  9999999999999999999999999999974

>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens}

Probab=99.67  E-value=4.5e-17  Score=132.85  Aligned_cols=57  Identities=44%  Similarity=1.043  Sum_probs=54.5

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus        18 ~~~~C~~p~~~G~C~~~~~rwyYd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~   74 (75)
T 1yc0_I           18 TEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRG   74 (75)
T ss_dssp             HHHHHTSCCCCCSBCCBEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHCSC
T ss_pred             CcccccCCCCCCcCCCCeeEEEEECCCCeeeEeEcCCccCCCcCcCCHHHHHhHCcC
Confidence            467899999999999999999999999999999999999999999999999999975

>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I

Probab=99.66  E-value=8e-17  Score=127.86  Aligned_cols=59  Identities=19%  Similarity=0.487  Sum_probs=54.9

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCcCC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFRAE  555 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~~~  555 (615)
                      ++|.++++.|.|.+.+.|||||+.+++|+.|+|+||+||.|||.|+++|+++|......
T Consensus         3 ~~C~~p~~~G~C~~~~~rwyyd~~t~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~~~~   61 (65)
T 3aug_A            3 AFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAAGGP   61 (65)
T ss_dssp             GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSCCC--
T ss_pred             ccccCCCCCCCCcCCeeEEEEECCCCeeeeEecCCcCCCccCcCCHHHHHhhCcCCCCC
Confidence            57999999999999999999999999999999999999999999999999999986543

>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1

Probab=99.65  E-value=1.3e-16  Score=123.45  Aligned_cols=54  Identities=41%  Similarity=0.920  Sum_probs=52.5

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|.
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~   56 (57)
T 1dtk_A            3 KYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV   56 (57)
T ss_dssp             GGGGCCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             ccccCCCCCccCCCCcceEEEcCCCCcCcEEEcCCcCCCCCCcCCHHHHHHHcc
Confidence            689999999999999999999999999999999999999999999999999996

>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A

Probab=99.65  E-value=1.3e-16  Score=123.78  Aligned_cols=55  Identities=20%  Similarity=0.542  Sum_probs=53.2

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yn~~~~~C~~F~ygGC~gN~NnF~t~~~C~~~C~~   57 (58)
T 3aub_A            3 AFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAA   57 (58)
T ss_dssp             GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSC
T ss_pred             CcCcCCCCCCCCCCCeeeEEEECCCCceeEEecCCcCCCCcCcCCHHHHHHHccc
Confidence            6799999999999999999999999999999999999999999999999999974

>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1

Probab=99.64  E-value=1.5e-16  Score=124.80  Aligned_cols=57  Identities=32%  Similarity=0.754  Sum_probs=54.7

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      +++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..+
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~~yn~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~~   60 (61)
T 1bun_B            4 HPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY   60 (61)
T ss_dssp             CTTTTSCCCCCCSSSCEEEEEEEGGGTEEEEEEECSCCSSSCCBSSHHHHHHHHCCC
T ss_pred             CCcCcCCCCCcCCCCCeeEEEEECCCCcceEEecCCcCCCccCcCCHHHHHhhcccc
Confidence            478999999999999999999999999999999999999999999999999999875

>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A

Probab=99.64  E-value=1.4e-16  Score=127.90  Aligned_cols=58  Identities=40%  Similarity=0.950  Sum_probs=55.3

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                      .++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|||.|+++|+++|....
T Consensus         7 ~~~C~lp~~~G~C~~~~~rwyYd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~~~   64 (70)
T 2ddi_A            7 TDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVVD   64 (70)
T ss_dssp             CCGGGSCCCCCSCSSCEEEEEEEGGGTEEEEEEECSSSCCSCCBSSHHHHHHHSCCCC
T ss_pred             CCcCcCCCCCccCCCCeeEEEEECCCCeeeeeECCCcCCCCCCCCCHHHHHhHccCcC
Confidence            5789999999999999999999999999999999999999999999999999998743

>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A

Probab=99.63  E-value=2.3e-16  Score=122.42  Aligned_cols=55  Identities=42%  Similarity=1.081  Sum_probs=53.1

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   57 (58)
T 1kth_A            3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP   57 (58)
T ss_dssp             GGGGSCCCCCBSSCCEEEEEEETTTTEEEEEEECSBSCCSCCBSSHHHHHHHHCC
T ss_pred             CcccCCCCCccCCCCeeeEEEcCCCCccceeecCCccCCCCCcCCHHHHHhHccC
Confidence            5799999999999999999999999999999999999999999999999999975

>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A

Probab=99.63  E-value=2.2e-16  Score=123.41  Aligned_cols=56  Identities=34%  Similarity=0.638  Sum_probs=53.2

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|.+|++.|.|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~~yd~~~~~C~~F~ygGC~GN~N~F~t~~eC~~~C~~   59 (60)
T 1y62_A            4 PSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCLY   59 (60)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHC-
T ss_pred             CCcCcCCCCCcCCCCCeeEEEEeCCCCcccEeECCCcCCCCcCcCCHHHHHhhCcC
Confidence            46899999999999999999999999999999999999999999999999999974

>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ...

Probab=99.63  E-value=2.7e-16  Score=122.15  Aligned_cols=55  Identities=33%  Similarity=0.902  Sum_probs=53.2

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   57 (58)
T 1g6x_A            3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG   57 (58)
T ss_dssp             GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHCC
T ss_pred             ccccCCCCCCCCCCCeeEEEEECCCCceeEEecCCcCCCCcCcCCHHHHHhHccC
Confidence            6899999999999999999999999999999999999999999999999999975

>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A

Probab=99.63  E-value=3e-16  Score=122.22  Aligned_cols=55  Identities=38%  Similarity=0.934  Sum_probs=53.0

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      .++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|.
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~~yn~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~   58 (59)
T 1dtx_A            4 RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI   58 (59)
T ss_dssp             SGGGGSCCCCCSSSCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHT
T ss_pred             CCcCcCCCCCccCCCCeeEEEEecCCCCCeEeecCCcCCCCcCcCCHHHHHhhcc
Confidence            4689999999999999999999999999999999999999999999999999996

>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I

Probab=99.63  E-value=3.1e-16  Score=122.20  Aligned_cols=55  Identities=45%  Similarity=1.081  Sum_probs=53.0

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      +++|.+|++.|+|.+.++|||||+.+++|+.|+|+||+||.|+|.|+++|+++|.
T Consensus         4 ~~~C~~p~~~G~C~~~~~rw~yn~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~   58 (59)
T 3byb_A            4 PDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA   58 (59)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHC
T ss_pred             CCcCCCCCCCCCCCCCeeEEEEECCCCEEeEEECCCcCCCCcCcCCHHHHHhHcc
Confidence            4689999999999999999999999999999999999999999999999999996

>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1

Probab=99.62  E-value=4.5e-16  Score=123.63  Aligned_cols=57  Identities=40%  Similarity=0.908  Sum_probs=54.7

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      +++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|...
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~   60 (65)
T 1jc6_A            4 PTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAK   60 (65)
T ss_dssp             CCGGGSCCCCCSCCCCCCEEEEETTTTEEEEECCCSSCCCSSCBSSHHHHHHHTSCC
T ss_pred             CCcCcCCCCCCCCCCCeeEEEEECCCCeeeeeecCCcCCCCCCcCCHHHHHhhcccc
Confidence            478999999999999999999999999999999999999999999999999999874

>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1

Probab=99.62  E-value=3.1e-16  Score=122.64  Aligned_cols=56  Identities=34%  Similarity=0.761  Sum_probs=53.7

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         4 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   59 (60)
T 1bf0_A            4 PWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG   59 (60)
T ss_dssp             CSGGGCCCCCCCSSCCEEEEEEETTTTEEEEEEECSTTCCSCCBSSTTTTHHHHTC
T ss_pred             CccCCCCCCCccCCCCeeEEEEeCCCCccEEeecCCcCCCCcCcCCHHHHHHHccC
Confidence            46899999999999999999999999999999999999999999999999999975

>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C

Probab=99.62  E-value=4.5e-16  Score=123.64  Aligned_cols=57  Identities=39%  Similarity=0.951  Sum_probs=54.6

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      +++|+||++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|...
T Consensus         4 p~~C~lp~~~G~C~~~~~rwyyd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~~~~~   60 (66)
T 4dtg_K            4 PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG   60 (66)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHSSC
T ss_pred             CCcccCCCCCCCccCceeEEEEECCCCCEEeeEcCCCCCCCCCCCCHHHHHHHHhcc
Confidence            468999999999999999999999999999999999999999999999999999864

>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} SCOP: g.8.1.1 PDB: 3ofw_A 1shp_A 3t62_D 3uou_B

Probab=99.62  E-value=5.1e-16  Score=121.82  Aligned_cols=57  Identities=39%  Similarity=0.883  Sum_probs=54.4

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      +++|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|+|.|+++|+++|..+
T Consensus         4 ~~~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~~l   60 (61)
T 3m7q_B            4 ASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRAL   60 (61)
T ss_dssp             CGGGGSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHSCCC
T ss_pred             CccccCCCCCCCCcCceeEEEEECCCCcEEeEEeCCcCCCCCCCCCHHHHHhhCccc
Confidence            468999999999999999999999999999999999999999999999999999863

>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1

Probab=99.61  E-value=4.8e-16  Score=121.95  Aligned_cols=56  Identities=30%  Similarity=0.851  Sum_probs=53.8

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|++|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         5 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~   60 (61)
T 1irh_A            5 PSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK   60 (61)
T ss_dssp             CSSSSSCCCCSSSCCCCCEEEECTTTCSEEEECCCCSSCCSCCBSSSHHHHHHHTC
T ss_pred             CccCcCCCCCcCCCCCeeEEEEeCCCCcceEEEeCCcCCCCCCcCCHHHHHhHccC
Confidence            47899999999999999999999999999999999999999999999999999974

>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E

Probab=99.61  E-value=4.6e-16  Score=120.84  Aligned_cols=55  Identities=45%  Similarity=1.106  Sum_probs=52.6

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|++.|..
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~~C~~~C~~   57 (58)
T 1aap_A            3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS   57 (58)
T ss_dssp             GGGGBCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC-
T ss_pred             ccccCCCCCCCCcCceeeEEEECCCCeEeeeecCCcCCCCCCcCCHHHHHHHccC
Confidence            5799999999999999999999999999999999999999999999999999974

>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1

Probab=99.61  E-value=5e-16  Score=125.20  Aligned_cols=58  Identities=38%  Similarity=0.930  Sum_probs=55.2

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                      .++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|....
T Consensus        11 ~~~C~lp~~~G~C~~~~~r~yyn~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~~~   68 (71)
T 1adz_A           11 PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP   68 (71)
T ss_dssp             CGGGGSCCCCCSSCCCCCEEEEEGGGTEEEEECCCCSSCCSCCBSSHHHHHHHTTCSS
T ss_pred             CCcCcCCCCCCCCCCceeeEEEcCCCCccceEeeCCcCCCccCcCCHHHHHHhccccC
Confidence            4789999999999999999999999999999999999999999999999999998753

>2kcr_A Anntoxin; protein; NMR {Hyla annectans}

Probab=99.61  E-value=5.6e-16  Score=121.62  Aligned_cols=56  Identities=36%  Similarity=0.710  Sum_probs=53.6

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|.+|++.|.|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~   59 (61)
T 2kcr_A            4 DYRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCVT   59 (61)
T ss_dssp             SGGGSSCCCCCCCSSCCCEEEEETTTTEEEEECCCSSSCCSCCBSCHHHHHHHHHH
T ss_pred             CccccCCCCCccCCCCeeEEEEeCCCCcceEEEcCCcCCCCcCCCCHHHHHhhccC
Confidence            36899999999999999999999999999999999999999999999999999974

>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena}

Probab=99.60  E-value=8.1e-16  Score=117.88  Aligned_cols=53  Identities=45%  Similarity=1.063  Sum_probs=50.9

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||  +++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         2 ~~C~~p~~~G~C~~~~~r~~yd--~~~C~~F~ygGC~gN~N~F~t~~~C~~~C~~   54 (55)
T 2jot_A            2 DTCRLPSDRGRCKASFERWYFN--GRTCAKFIYGGCGGNGNKFPTQEACMKRCAK   54 (55)
T ss_dssp             CSTTSCCCCCCTTCCCEEEEEE--TTEEEEEECCSCSCSSSEESSHHHHHHHHTC
T ss_pred             CcccCCCCCccCCCCcceEEEc--CCcccEeecCCcCCCCcCCCCHHHHHHHccc
Confidence            5799999999999999999999  9999999999999999999999999999974

>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1

Probab=99.59  E-value=5.7e-16  Score=133.43  Aligned_cols=59  Identities=34%  Similarity=0.928  Sum_probs=40.8

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      .+++|.+|++.|.|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|...+
T Consensus        35 ~~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~~   93 (99)
T 1co7_I           35 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAI   93 (99)
T ss_dssp             --------CCCCSBCCCEEEEEET----TEEEEEECSSSCCSSCBSSHHHHHC------
T ss_pred             CCccCCCCCcCCCCCCceeEEEEECCCCceeEEeeCCcCCCCCCcCCHHHHHHHCcCcC
Confidence            46889999999999999999999999999999999999999999999999999998754

>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1

Probab=99.58  E-value=1.4e-15  Score=120.22  Aligned_cols=55  Identities=45%  Similarity=1.027  Sum_probs=53.3

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         7 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~gN~N~F~t~~eC~~~C~~   61 (63)
T 1zr0_B            7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR   61 (63)
T ss_dssp             HHHTSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHTSC
T ss_pred             CcccCCCCCCCCCCCeeEEEEeCCCCeEEEEecCCcCCCccCcCCHHHHHhhCcC
Confidence            6799999999999999999999999999999999999999999999999999975

>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens}

Probab=99.58  E-value=1.2e-15  Score=124.29  Aligned_cols=56  Identities=38%  Similarity=0.912  Sum_probs=53.7

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      .++|.+|++.|+|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+++|..
T Consensus        19 ~~~C~~p~~~G~C~~~~~rwyYd~~t~~C~~F~YgGC~GN~NnF~t~~eC~~~C~~   74 (75)
T 1yc0_I           19 EDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRG   74 (75)
T ss_dssp             HHHHTSCCCCCSBCCBEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHCSC
T ss_pred             cccccCCCCCCcCCCCeeEEEEECCCCeeeEeEcCCccCCCcCcCCHHHHHhHCcC
Confidence            46899999999999999999999999999999999999999999999999999975

>2uuy_B Tryptase inhibitor; calcium, zymogen, protease, hydrolase, digestion, metal- binding, serine protease; 1.15A {Rhipicephalus appendiculatus} SCOP: g.8.1.3 PDB: 2lfk_A 2lfl_A 2uux_A

Probab=99.52  E-value=9.4e-15  Score=109.10  Aligned_cols=49  Identities=22%  Similarity=0.487  Sum_probs=46.5

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .++|.+|++.|+|+++++|||||+.  +|+  +|+||+|  |||.|+++|+++|.
T Consensus         3 ~~~C~~p~~~G~C~a~~~r~yyn~~--~C~--~YGGC~G--NnF~t~~eC~~~C~   51 (52)
T 2uuy_B            3 VPIGWSEPVKGLCKARFTRYYCMGN--CCK--VYEGCYT--GGYSRMGECARNCP   51 (52)
T ss_dssp             CCTTCCCCCCCSBCCCEEEEEEETT--EEE--EEEESCC--SSBSSHHHHHTTCC
T ss_pred             CCccCCCCCCccccCceeeEEEccc--cCe--eCcCcCC--CCcCCHHHHHHHcC
Confidence            5789999999999999999999976  999  9999999  99999999999996

>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1

Probab=99.51  E-value=7.3e-15  Score=126.51  Aligned_cols=58  Identities=33%  Similarity=0.874  Sum_probs=40.7

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                      +++|.+|++.|+|.+...|||||+.+++|+.|+|+||+||.|||.|+++|+++|....
T Consensus        36 ~~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~ygGC~GN~NnF~t~~eC~~~C~~~~   93 (99)
T 1co7_I           36 PDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAI   93 (99)
T ss_dssp             -------CCCCSBCCCEEEEEET----TEEEEEECSSSCCSSCBSSHHHHHC------
T ss_pred             CccCCCCCcCCCCCCceeEEEEECCCCceeEEeeCCcCCCCCCcCCHHHHHHHCcCcC
Confidence            5789999999999999999999999999999999999999999999999999999753

>2uuy_B Tryptase inhibitor; calcium, zymogen, protease, hydrolase, digestion, metal- binding, serine protease; 1.15A {Rhipicephalus appendiculatus} SCOP: g.8.1.3 PDB: 2lfk_A 2lfl_A 2uux_A

Probab=99.41  E-value=1.5e-13  Score=102.57  Aligned_cols=49  Identities=24%  Similarity=0.600  Sum_probs=46.2

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      ..+|.+|++.|+|++.++|||||+.  +|+  +|+||+|  |||.|+++|+++|.
T Consensus         3 ~~~C~~p~~~G~C~a~~~r~yyn~~--~C~--~YGGC~G--NnF~t~~eC~~~C~   51 (52)
T 2uuy_B            3 VPIGWSEPVKGLCKARFTRYYCMGN--CCK--VYEGCYT--GGYSRMGECARNCP   51 (52)
T ss_dssp             CCTTCCCCCCCSBCCCEEEEEEETT--EEE--EEEESCC--SSBSSHHHHHTTCC
T ss_pred             CCccCCCCCCccccCceeeEEEccc--cCe--eCcCcCC--CCcCCHHHHHHHcC
Confidence            3689999999999999999999977  999  8999998  99999999999996

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.2e-07  Score=80.15  Aligned_cols=82  Identities=29%  Similarity=0.467  Sum_probs=68.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+..+++|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus        17 ~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~   95 (100)
T 2edj_A           17 NQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGE-TSWSAVLD   95 (100)
T ss_dssp             CEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCC-CBCCEEEE
T ss_pred             CEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCC-EEEEEEEE
Confidence            45677899999999999999999999886655654556777778889999999999999999999999987 56666666


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        96 V~~   98 (100)
T 2edj_A           96 VTE   98 (100)
T ss_dssp             EES
T ss_pred             Eec
Confidence            643

>3ngg_A Omwaprin-A; venom protein, racemic protein crystallography, direct metho antibiotic; 1.33A {Oxyuranus microlepidotus}

Probab=98.54  E-value=3.2e-08  Score=73.86  Aligned_cols=45  Identities=40%  Similarity=0.973  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCcccCCCccccCCCCCccCCcccC
Q psy10163        269 YKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDI  313 (615)
Q Consensus       269 ~k~g~Cp~~~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~~~  313 (615)
                      .|+|.||....+.|..+|.+|.+|++.+|||.++||..|+.|+.+
T Consensus         5 ~KpG~CP~~~~~~C~~~C~~D~~C~~~~KCC~~~CG~~C~~P~~~   49 (50)
T 3ngg_A            5 KKPGLCPPRPQKPCVKECKNDDSCPGQQKCCNYGCKDECRDPIFV   49 (50)
T ss_dssp             CCSSBCCCCCSCSCCBCCSSGGGSSTTCEEEECSSCEEEECCBCC
T ss_pred             CcCCCCcCCccccchhhCcCccCCCCCCCcccCCcCCccCCcccC
Confidence            589999944467899999999999999999999999999998754

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.50  E-value=2.6e-07  Score=80.72  Aligned_cols=83  Identities=28%  Similarity=0.431  Sum_probs=69.6

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+..++.|.|..+...|+|.|.|.+.|..|. ....+.|
T Consensus        16 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l   94 (118)
T 2eo9_A           16 VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGE-ATWSAYI   94 (118)
T ss_dssp             CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCE-EEEECCE
T ss_pred             CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCc-EEEEEEE
Confidence            345678999999999999999999999886666655567788888899999999999999999999999997 5555666


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|.+
T Consensus        95 ~V~~   98 (118)
T 2eo9_A           95 EVQE   98 (118)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            6644

>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*

Probab=98.49  E-value=3.9e-08  Score=84.18  Aligned_cols=82  Identities=28%  Similarity=0.554  Sum_probs=65.5

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecC-CCCceEEecCC---eEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG-SDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~-~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..+++.+...+   +|.|.++...|+|.|.|.|.|..|. ...
T Consensus        13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~   91 (100)
T 3knb_A           13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGS-DSA   91 (100)
T ss_dssp             SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEE-EEE
T ss_pred             CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCE-EEE
Confidence            346788999999999999999999999886655543 33566655443   6999999999999999999999997 555


Q ss_pred             ceeeeec
Q psy10163        424 EFNVIVR  430 (615)
Q Consensus       424 ~~~l~V~  430 (615)
                      .+.|.|.
T Consensus        92 ~~~l~V~   98 (100)
T 3knb_A           92 TVNIHIR   98 (100)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            6666664

>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O

Probab=98.35  E-value=2.1e-07  Score=80.68  Aligned_cols=80  Identities=31%  Similarity=0.576  Sum_probs=64.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|+|.|+...+.. ..++.+..++   .|.|.++...|+|.|.|.|.|..|. ....+
T Consensus        22 ~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~   99 (107)
T 3knb_B           22 PVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA-SERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGE-AYAAA   99 (107)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-CSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             cEEEeCCCcEEEEEEEEEecCCEEEEEECcccccc-eeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCE-EEEEE
Confidence            46778999999999999999999999987666643 3456555444   6999999999999999999999997 55556


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus       100 ~l~V~  104 (107)
T 3knb_B          100 AVTVL  104 (107)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66553

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A

Probab=98.34  E-value=2.2e-07  Score=77.51  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=58.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc--eeecCCCCceEE-ecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE--VSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~--~~l~~~~g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++.  ..+... ..... .....|.|..+...|+|.|.|.|.|..|. ....+
T Consensus        11 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~   88 (93)
T 1wit_A           11 KIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE-LLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGE-DEAIF   88 (93)
T ss_dssp             EEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT-SEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             ceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc-EEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCe-EEEEE
Confidence            467889999999999999999999998865  554322 11111 12246889999999999999999999996 44444


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus        89 ~l~V   92 (93)
T 1wit_A           89 EVIV   92 (93)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4433

>1udk_A Nawaprin; antiparallel beta-sheet, spiral backbone configuration, unknown function; NMR {Naja nigricollis} SCOP: g.3.14.1

Probab=98.34  E-value=2.6e-07  Score=69.25  Aligned_cols=43  Identities=35%  Similarity=0.969  Sum_probs=37.2

Q ss_pred             CCCCCCC-CC----CCCcCCCCCCCCCcccCCCccccCCCCCc-cCCcc
Q psy10163        269 YKEGECR-PQ----PQNVCADNCKDDADCTGQAKCCPNDCGYS-CSNLF  311 (615)
Q Consensus       269 ~k~g~Cp-~~----~~~~C~~~C~~dadc~~~~kCC~~~Cg~~-C~~p~  311 (615)
                      .|+|.|| +.    ..+.|..+|++|.||++.+|||.++||.. |+.|+
T Consensus         2 ~K~G~CP~~~~~~~~~~~c~~~C~~D~~Cp~~~KCC~~~CG~~cC~~P~   50 (51)
T 1udk_A            2 EKSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCGFMTCTTPV   50 (51)
T ss_dssp             CCSSBCCTTCCCCCCSSCCCCCCSSGGGSSTTCEEECCSSSSCEEECCB
T ss_pred             CcCccCcCCCccccccCcccccCcCcccCCCccccccCCCCCceecCCC
Confidence            4899999 33    24668999999999999999999999998 88875

>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}

Probab=98.32  E-value=3.3e-07  Score=77.03  Aligned_cols=81  Identities=30%  Similarity=0.489  Sum_probs=65.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++....++   +|.|..+...|+|.|.|.+.|..|. ....+.
T Consensus        15 ~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~-~~~~~~   93 (99)
T 1u2h_A           15 QSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGA-RQCEAR   93 (99)
T ss_dssp             EEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEE
T ss_pred             eEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCc-eeEEEE
Confidence            467789999999999999999999988766665555566655554   6999999999999999999999887 555556


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|.+
T Consensus        94 l~V~~   98 (99)
T 1u2h_A           94 LEVRG   98 (99)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            66543

>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}

Probab=98.31  E-value=8e-07  Score=77.80  Aligned_cols=82  Identities=24%  Similarity=0.345  Sum_probs=66.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC----eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g----sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+..++    +|.|.++...|+|.|.|.+.|..|. ....
T Consensus        24 ~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~  102 (116)
T 2kkq_A           24 SKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGV-TTCN  102 (116)
T ss_dssp             CEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCe-EEEE
Confidence            4578899999999999999999999988766665445666665543    7999999999999999999999887 5555


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|..
T Consensus       103 ~~l~V~~  109 (116)
T 2kkq_A          103 TRLDVTA  109 (116)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            6666543

>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.29  E-value=1.6e-06  Score=74.54  Aligned_cols=83  Identities=30%  Similarity=0.422  Sum_probs=66.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec--CC--eEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--DG--VLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~--~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+..  ++  .|.|..+...|+|.|.|.+.|..|. ...
T Consensus        16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~   94 (110)
T 2dm2_A           16 KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGR-ISC   94 (110)
T ss_dssp             CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCC-EEE
T ss_pred             cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCe-EEE
Confidence            345678999999999999999999999887666654455665543  34  6999999999999999999999997 566


Q ss_pred             ceeeeecc
Q psy10163        424 EFNVIVRG  431 (615)
Q Consensus       424 ~~~l~V~~  431 (615)
                      .+.|.|..
T Consensus        95 ~~~l~V~~  102 (110)
T 2dm2_A           95 TGRLMVQA  102 (110)
T ss_dssp             CCCEEEEC
T ss_pred             EEEEEEEC
Confidence            66666644

>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}

Probab=98.27  E-value=9.7e-07  Score=74.02  Aligned_cols=76  Identities=18%  Similarity=0.401  Sum_probs=59.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.| |.|.|.++...+. ..+++.+ ..+.|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus        18 ~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~-~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~   93 (95)
T 2ckn_A           18 SLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLV-ESNRTRI-TGEEVEVRDSIPADSGLYACVTSSPSGS-DTTYFSVN   93 (95)
T ss_dssp             CEEECTTSCEEEECCEESSC-CEEEEEBTTBCCC-CCSSEEE-CSSEEEESSCCGGGSEEEEEEEEETTEE-EEEEEEEE
T ss_pred             eEEEcCCCeEEEEEECCCCC-CceEEEECCEecC-CCCCEEE-eCCEEEECCCChHHCEEEEEEeccCCCc-EEEEEEEE
Confidence            45678999999999999999 8999988655443 2345444 3779999999999999999999999886 44444443

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0

Probab=98.24  E-value=1.1e-06  Score=74.95  Aligned_cols=83  Identities=24%  Similarity=0.410  Sum_probs=56.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+............+.|.|.++...|+|.|.|.+.|..|. ....+.|
T Consensus        18 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l   96 (108)
T 3kvq_A           18 ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGC-AKVEAFF   96 (108)
T ss_dssp             CCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----C-EEEEEEE
T ss_pred             CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCc-eEEEEEE
Confidence            345678899999999999999999999876554443333333345568999999999999999999999997 5555666


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|.+
T Consensus        97 ~V~~  100 (108)
T 3kvq_A           97 IIEG  100 (108)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            6654

>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}

Probab=98.19  E-value=2.3e-06  Score=71.66  Aligned_cols=81  Identities=26%  Similarity=0.493  Sum_probs=63.4

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEE-ecCC--eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKL-TLDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~-~~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|. |.|.|.|.++...+.. ..++.+ ...+  .|.|.++...|+|.|.|.+.|..|. ....
T Consensus        10 ~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~   87 (97)
T 2bk8_A           10 HAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLEN-SEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE-DSSY   87 (97)
T ss_dssp             CEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCS-SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE-EEEE
T ss_pred             CEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcC-CCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe-EeEE
Confidence            4677899999999999997 9999999886655542 345544 3444  7999999999999999999999997 5555


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|.+
T Consensus        88 ~~l~V~~   94 (97)
T 2bk8_A           88 AELFVKG   94 (97)
T ss_dssp             EEEEETT
T ss_pred             EEEEEEe
Confidence            6666644

>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}

Probab=98.18  E-value=2.2e-06  Score=70.91  Aligned_cols=68  Identities=29%  Similarity=0.429  Sum_probs=55.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.|+...|. ...++.+..++   .|.|.++...|+|.|.|.|+|..+
T Consensus         5 ~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~   75 (84)
T 2lu7_A            5 RVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLA-SQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSR   75 (84)
T ss_dssp             CEEECTTSCEEEECCCSC-CSTTCEEEETTEECC-CCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTCE
T ss_pred             EEEEecCCCEEEEEEECC-CCcEEEEEECCEEcc-ccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEEE
Confidence            467889999999999866 999999998776665 34566665555   699999999999999999988643

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=98.18  E-value=1.7e-06  Score=74.97  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=63.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+.. ..++.+..   ...|.|.++...|+|.|.|.+.|..|. ....+
T Consensus        16 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~~   93 (114)
T 2cqv_A           16 DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQE-SEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGS-RQAQV   93 (114)
T ss_dssp             SEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCC-SSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCE-EECCE
T ss_pred             CeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcC-CCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCc-EEEEE
Confidence            45778999999999999999999999886555542 23555443   347999999999999999999999996 55566


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        94 ~l~V~   98 (114)
T 2cqv_A           94 NLTVV   98 (114)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66663

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A

Probab=98.17  E-value=2.8e-06  Score=72.96  Aligned_cols=79  Identities=23%  Similarity=0.450  Sum_probs=62.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+. ...++.+..   .+.|.|.++...|+|.|.|.+.|..|. ....+
T Consensus        23 ~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~  100 (106)
T 1nct_A           23 SMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLS-TSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGK-QEAEF  100 (106)
T ss_dssp             CEEESSSSCEECCEEEECSSCCBCCBCSSSSCCT-TCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCB-CCEEE
T ss_pred             CEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECC-CCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCe-EEEEE
Confidence            4677899999999999999999999988655544 234555443   357999999999999999999999997 55555


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus       101 ~l~V  104 (106)
T 1nct_A          101 TLTI  104 (106)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5554

>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4

Probab=98.16  E-value=1.2e-06  Score=73.51  Aligned_cols=81  Identities=25%  Similarity=0.322  Sum_probs=61.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-cCC--eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-LDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.......... ..+  .|.|.++...|+|.|.|.+.|..|. ....+
T Consensus        14 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~   92 (99)
T 1g1c_A           14 SQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGE-TSSHA   92 (99)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             ceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCc-EEEEE
Confidence            3567889999999999999999999988665554333322222 233  6999999999999999999999887 45555


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        93 ~l~V~   97 (99)
T 1g1c_A           93 FLLVQ   97 (99)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.14  E-value=2.1e-06  Score=73.61  Aligned_cols=83  Identities=27%  Similarity=0.533  Sum_probs=63.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-cCC--eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-LDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+.......... .++  .|.|.++...|+|.|.|.+.|..|. ....
T Consensus        17 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~   95 (110)
T 2dm3_A           17 GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQ-NSFS   95 (110)
T ss_dssp             CEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCE-EEEC
T ss_pred             CcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCE-EEEE
Confidence            34677889999999999999999999988655554333333332 333  7999999999999999999999997 5666


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|.+
T Consensus        96 ~~l~V~~  102 (110)
T 2dm3_A           96 LELVVAA  102 (110)
T ss_dssp             CEEEEEC
T ss_pred             EEEEEeC
Confidence            6666644

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}

Probab=98.14  E-value=1.7e-06  Score=72.69  Aligned_cols=81  Identities=25%  Similarity=0.422  Sum_probs=63.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCC--eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.... .......++  .|.|..+...|+|.|.|.+.|..|. ....+
T Consensus        14 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~   92 (100)
T 2kdg_A           14 NMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGE-ATFTV   92 (100)
T ss_dssp             CEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             CEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCe-EEEEE
Confidence            3567789999999999999999999988665554333 233444444  7999999999999999999999987 55556


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        93 ~l~V~   97 (100)
T 2kdg_A           93 QLDVL   97 (100)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66553

>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A

Probab=98.13  E-value=2.9e-06  Score=72.98  Aligned_cols=81  Identities=23%  Similarity=0.243  Sum_probs=60.4

Q ss_pred             cccccCCCeeeeeecccCCCC---CeeeccCCceeecC--CCCceEEe---------cCCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI---PVYTWSKGEVSIDG--SDGHYKLT---------LDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~---P~i~w~k~~~~l~~--~~g~~~~~---------~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.|.|.   |.|.|.|+......  ...++.+.         ...+|.|.++...|+|.|.|.+.
T Consensus        13 ~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~   92 (108)
T 3cx2_A           13 DGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVS   92 (108)
T ss_dssp             CEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred             cEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEe
Confidence            456789999999999999998   99999876533221  12344332         13579999999999999999999


Q ss_pred             CCCCcccccceeeeec
Q psy10163        415 NGIGDPIRKEFNVIVR  430 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~  430 (615)
                      |..|. ....+.|.|.
T Consensus        93 N~~G~-~~~~~~L~V~  107 (108)
T 3cx2_A           93 TKDKF-DCSNFNLTVH  107 (108)
T ss_dssp             CSSCE-EEEEEEEEEE
T ss_pred             cCCCc-eEEEEEEEEe
Confidence            99997 5566666553

>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.09  E-value=3.6e-06  Score=73.41  Aligned_cols=80  Identities=21%  Similarity=0.234  Sum_probs=62.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-cCC--eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-LDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.|+|.|.|.|.++...+.  .+++.+. .++  .|.|.++...|+|.|.|.|.|..|. ....
T Consensus        32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~  108 (118)
T 2e7c_A           32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD--TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMK-DTAT  108 (118)
T ss_dssp             SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC--CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCE-ECCE
T ss_pred             CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC--CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCe-EEEE
Confidence            45677889999999999999999999988665554  2333333 222  4999999999999999999999996 5556


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus       109 ~~l~V~  114 (118)
T 2e7c_A          109 IRIRVV  114 (118)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            666553

>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}

Probab=98.08  E-value=2.5e-06  Score=72.14  Aligned_cols=81  Identities=20%  Similarity=0.248  Sum_probs=63.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+... .++.+...+   +|.|.++...|+|.|.|.+.|..|. ....+
T Consensus        17 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~   94 (103)
T 3qp3_A           17 SHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES-SKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGE-ASDYA   94 (103)
T ss_dssp             CEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             ceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC-CCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCc-EEEEE
Confidence            356778999999999999999999998866555432 355544433   6999999999999999999999997 56666


Q ss_pred             eeeecc
Q psy10163        426 NVIVRG  431 (615)
Q Consensus       426 ~l~V~~  431 (615)
                      .|.|.+
T Consensus        95 ~l~V~~  100 (103)
T 3qp3_A           95 TLDVTG  100 (103)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            666654

>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X

Probab=98.08  E-value=7.9e-06  Score=69.82  Aligned_cols=75  Identities=20%  Similarity=0.305  Sum_probs=56.5

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCce-E-E--e----cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY-K-L--T----LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~-~-~--~----~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+..+.+.|.+.|+|.|.|+|.|+...+.... +. . +  .    ..+.|.|.++...|+|.|.|.|.|..|. ....+
T Consensus        15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~   92 (103)
T 1wwb_X           15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESK-YICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQI   92 (103)
T ss_dssp             CCCEEEEEEEEECSSCCEEEEEETTEEECCCS-SEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEE
T ss_pred             ECcEEEEEEEEEEeCCCEEEEEECCEECCCCC-cEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCc-EeEEE
Confidence            46678899999999999999988766665332 21 1 1  1    1234999999999999999999999997 55556


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        93 ~l~V~   97 (103)
T 1wwb_X           93 SAHFM   97 (103)
T ss_dssp             EECCS
T ss_pred             EEEEC
Confidence            55553

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}

Probab=98.05  E-value=3.3e-06  Score=70.60  Aligned_cols=80  Identities=25%  Similarity=0.498  Sum_probs=62.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++.+..++   .|.|..+...|+|.|.|.+.|..|. ....+
T Consensus        15 ~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~   92 (99)
T 3puc_A           15 DTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQ-GGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGS-VSSSC   92 (99)
T ss_dssp             CEEEESSSCEEEEEEEEEESCCEEEEEETTEECCS-SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             cEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcC-CCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCc-EeEEE
Confidence            35677899999999999999999999886655542 3556555443   6999999999999999999999887 45555


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        93 ~l~V~   97 (99)
T 3puc_A           93 KLTIK   97 (99)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55553

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.03  E-value=3.7e-06  Score=71.03  Aligned_cols=78  Identities=22%  Similarity=0.418  Sum_probs=61.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.| |.|.|.|+...+.. ..++.+. .+.|.|..+...|+|.|.|.+.|..|. ....+.|.|
T Consensus        13 ~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~-~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V   88 (99)
T 2cr3_A           13 FLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAE-SNRTRIT-GEEVEVQDSVPADSGLYACVTSSPSGS-DTTYFSVNV   88 (99)
T ss_dssp             CCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCC-CSSEEEC-SSEEEETTCCTTTCEEEEEEEEETTEE-EEEEEEECB
T ss_pred             eEEeCCCcEEEEEEecCCC-CeEEEEECCEECCC-CCcEEEE-CCEEEEccCCHHHCEEEEEEEEeCCce-EEEEEEEEE
Confidence            4577899999999999998 89999876555432 2344443 678999999999999999999999887 455566666


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      .+
T Consensus        89 ~~   90 (99)
T 2cr3_A           89 SD   90 (99)
T ss_dssp             CS
T ss_pred             ec
Confidence            44

>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=2.6e-06  Score=71.54  Aligned_cols=79  Identities=27%  Similarity=0.386  Sum_probs=59.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+... ..........|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus        20 ~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~   97 (99)
T 2yr3_A           20 DCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA-RSTCEAGVAELHIQDALPEDHGTYTCLAENALGQ-VSCSAWVT   97 (99)
T ss_dssp             CEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSC-CCEEETTEEEEEECSCCTTCCBCEEEEEECSSCE-EEEECCEE
T ss_pred             CCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc-ceEeeCCeEEEEECCCChhhCEEEEEEEEECCCe-EEEEEEEE
Confidence            456788999999999999999999998755444322 2222233457999999999999999999999987 44444443


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        98 V   98 (99)
T 2yr3_A           98 V   98 (99)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.02  E-value=1e-05  Score=68.90  Aligned_cols=78  Identities=19%  Similarity=0.267  Sum_probs=60.5

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+  .|.|.|.|.|+...+. ...++.+..++   .|.|.++...|+|.|.|.|.|.   .....
T Consensus        15 ~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~-~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~---~~~~~   88 (100)
T 2yuz_A           15 TDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQ-ESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY---NVTLP   88 (100)
T ss_dssp             CCEEEETTSCCCEEEEC--SSCCCEEEEETTEECC-CCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS---CCCEE
T ss_pred             CceEEcCCCCEEEEEEe--CCCCeEEEEECCEECC-CCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC---CeeEE
Confidence            34678899999999999  8999999988766664 34566666655   6999999999999999999997   23445


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|.+
T Consensus        89 a~L~V~~   95 (100)
T 2yuz_A           89 AKVHVIS   95 (100)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            5555543

>1fle_I Elafin; hydrolase, serine protease, 3D-structure, zymogen, pancreas, signal, complex (serine protease/inhibitor); 1.90A {Homo sapiens} SCOP: g.3.14.1 PDB: 2rel_A

Probab=98.01  E-value=2.3e-06  Score=65.53  Aligned_cols=43  Identities=33%  Similarity=0.702  Sum_probs=35.9

Q ss_pred             CCCCCCCCC----CCCcCCCCCCCCCcccCCCccccCCCCCccCCcc
Q psy10163        269 YKEGECRPQ----PQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLF  311 (615)
Q Consensus       269 ~k~g~Cp~~----~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~  311 (615)
                      .|+|+||..    ....+..+|.+|.+|++.+|||.++||..|+.|+
T Consensus        11 ~KpG~CP~~~~~C~~~~~~~~C~~D~~Cp~~~KCC~~~CG~~C~~P~   57 (57)
T 1fle_I           11 TKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVPQ   57 (57)
T ss_dssp             CCSSCCCCCCEEESCSSCCCSCSSGGGSSSSCEEEECSSSEEEECCC
T ss_pred             CcCCcCcCCCCccccccccccCCccCcCCCCCccCcCcCccccCCCC
Confidence            499999933    3334558999999999999999999999998874

>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}

Probab=98.01  E-value=7.5e-06  Score=68.75  Aligned_cols=68  Identities=22%  Similarity=0.306  Sum_probs=53.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.|+...+. ...++.+..++   .|.|.++...|+|.|.|.|+|..+
T Consensus        15 ~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~-~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~   85 (91)
T 2lvc_A           15 FVHAITSECVMLACEVDR-EDAPVRWYKDGQEVE-ESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECA   85 (91)
T ss_dssp             EEECCTTCCEEEEEECSC-TTSCCEEEETTSCCC-CCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCEE
T ss_pred             EEEEECCCcEEEEEEECC-CCcEEEEEECCEEee-eeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceEE
Confidence            356678999999999865 889999988665554 33556665555   699999999999999999988643

>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=98.00  E-value=5.9e-06  Score=70.93  Aligned_cols=68  Identities=22%  Similarity=0.301  Sum_probs=56.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+ +.|.|.|.|.++...+.....++.+..++   .|.|.++...|+|.|.|.+++.
T Consensus        24 ~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~   94 (104)
T 1pd6_A           24 PAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGE   94 (104)
T ss_dssp             SEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETTE
T ss_pred             CcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECCC
Confidence            33678899999999999 79999999988666665443677777666   8999999999999999999664

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A

Probab=97.97  E-value=4e-06  Score=70.44  Aligned_cols=79  Identities=29%  Similarity=0.526  Sum_probs=59.2

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--CceEE-ecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--GHYKL-TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+....  ..+.. ...++|.|..+...|+|.|.|.+.|..|. ....
T Consensus        16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~   94 (100)
T 3caf_A           16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHT   94 (100)
T ss_dssp             CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCE-EEEE
Confidence            34577899999999999999999999987655443221  22222 23458999999999999999999999887 4444


Q ss_pred             eee
Q psy10163        425 FNV  427 (615)
Q Consensus       425 ~~l  427 (615)
                      +.|
T Consensus        95 ~~l   97 (100)
T 3caf_A           95 YHL   97 (100)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4

Probab=97.96  E-value=5.6e-06  Score=69.43  Aligned_cols=78  Identities=23%  Similarity=0.333  Sum_probs=59.4

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      ..+.+.+|+.++|.|.+. +.|.|.|.|.++....   ........+++|.|.++...|+|.|.|.+.|..|. ....+.
T Consensus        18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~---~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~   93 (98)
T 1gl4_B           18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGK---LPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAM-DQGTAT   93 (98)
T ss_dssp             CEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBC---CCTTEEEETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEE
T ss_pred             CCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCC---CCceeecCCCEEEEeCCChhhCEEEEEEecCCCCc-cccEEE
Confidence            345778999999999998 7999999998642211   11223455679999999999999999999999887 455555


Q ss_pred             eee
Q psy10163        427 VIV  429 (615)
Q Consensus       427 l~V  429 (615)
                      |.|
T Consensus        94 l~V   96 (98)
T 1gl4_B           94 LHV   96 (98)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X

Probab=97.95  E-value=7.4e-06  Score=73.41  Aligned_cols=75  Identities=17%  Similarity=0.225  Sum_probs=56.3

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe---------cCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---------LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~---------~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+..+.|.|.+.|+|.|.|+|.|+...|..........         ..++|.|..+...|+|.|+|.|.|..|. ....
T Consensus        14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~-~~~t   92 (126)
T 1he7_A           14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASAS   92 (126)
T ss_dssp             CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCe-EEEE
Confidence            34578899999999999999988766665333222211         1357999999999999999999999997 5555


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.|
T Consensus        93 ~~l~v   97 (126)
T 1he7_A           93 IMAAF   97 (126)
T ss_dssp             EEECC
T ss_pred             EEEEE
Confidence            55544

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}

Probab=97.95  E-value=9.8e-06  Score=67.10  Aligned_cols=74  Identities=24%  Similarity=0.485  Sum_probs=58.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+...       ..+.|.|..+...|+|.|.|.+.|..|......+.+.|
T Consensus        13 ~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V   85 (91)
T 3bfo_A           13 QKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII   85 (91)
T ss_dssp             EEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred             cEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-------CCCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence            45778999999999999999999998765444322       13578999999999999999999999974445556655


Q ss_pred             c
Q psy10163        430 R  430 (615)
Q Consensus       430 ~  430 (615)
                      .
T Consensus        86 ~   86 (91)
T 3bfo_A           86 D   86 (91)
T ss_dssp             C
T ss_pred             e
Confidence            3

>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}

Probab=97.94  E-value=1.1e-05  Score=67.39  Aligned_cols=84  Identities=27%  Similarity=0.464  Sum_probs=62.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|  .|.|.|.++...+.. ..++.+ ..+.|.|.++...|+|.|.|.+.|..|. ....+.|.
T Consensus        10 ~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~-~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~   84 (95)
T 4hwu_A           10 AYVVAPGESLELQCMLKD--AAVISWTKDGVHLGP-NNRTVL-IGEYLQIKGATPRDSGLYACTAARTVDS-ETWIFMVN   84 (95)
T ss_dssp             EEEECTTSCEEEECCCCT--TCEEEEEETTEEECC-CSSEEE-ETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEE
T ss_pred             cEEECCCCEEEEEEEeCC--CCEEEEEECCEECCC-CceEEE-eCCEEEECcCCcccCEEEEEEEccCCCc-EEEEEEEE
Confidence            356779999999999998  479999886655542 244443 4678999999999999999999999986 56667777


Q ss_pred             ecccceeee
Q psy10163        429 VRGNYEQWY  437 (615)
Q Consensus       429 V~~~~~~wy  437 (615)
                      |.+.....|
T Consensus        85 V~~~~~~~~   93 (95)
T 4hwu_A           85 VTDAAENLY   93 (95)
T ss_dssp             ECCC-----
T ss_pred             EeCCccccc
Confidence            766554433

>2z7f_I Antileukoproteinase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens}

Probab=97.93  E-value=2.1e-06  Score=64.04  Aligned_cols=42  Identities=33%  Similarity=0.785  Sum_probs=34.7

Q ss_pred             CCCCCCCCCCCCcC-----CCCCCCCCcccCCCccccCCCCCccCCcc
Q psy10163        269 YKEGECRPQPQNVC-----ADNCKDDADCTGQAKCCPNDCGYSCSNLF  311 (615)
Q Consensus       269 ~k~g~Cp~~~~~~C-----~~~C~~dadc~~~~kCC~~~Cg~~C~~p~  311 (615)
                      .|+|+||... ..|     ..+|.+|.+|++.+|||.++||..|+.|+
T Consensus         2 ~KpG~CP~~~-~~C~~~~~~~~C~~D~~Cp~~~KCC~~~Cg~~C~~P~   48 (50)
T 2z7f_I            2 RKPGKCPVTY-GQCLMLNPPNFCEMDGQCKRDLKCCMGMCGKSCVSPV   48 (50)
T ss_dssp             CCSSBCCCCS-CEESCSSCCCSCSSGGGSSTTCEEEEETTEEEEECCB
T ss_pred             CcCCCCcCCC-CcccccCCccCCCCcCccCCCCccCcCcCccccCCcc
Confidence            3789999331 234     36999999999999999999999999885

>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1

Probab=97.91  E-value=4.3e-06  Score=73.35  Aligned_cols=83  Identities=28%  Similarity=0.471  Sum_probs=64.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCe-eeccCCceeecC-CCCceEEe---cC----CeEEEeeccccCC-ceeeecCCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDG-SDGHYKLT---LD----GVLQIVGLVRQDA-GIYVCVAANGI  417 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~-~~g~~~~~---~~----gsl~I~~~~~~Ds-G~Y~C~a~n~~  417 (615)
                      ..+.+.+|+.++|.|.+.|.|.|. |.|.++...+.. ..+++.+.   .+    ..|.|.++...|+ |.|.|.|.|..
T Consensus        21 ~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~  100 (122)
T 2cry_A           21 QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSF  100 (122)
T ss_dssp             CCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSS
T ss_pred             CeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCC
Confidence            345677899999999999999998 999886555543 24566542   12    2789999999999 99999999999


Q ss_pred             Ccccccceeeeecc
Q psy10163        418 GDPIRKEFNVIVRG  431 (615)
Q Consensus       418 G~p~~~~~~l~V~~  431 (615)
                      |. ....+.|.|.+
T Consensus       101 G~-~~~~~~l~V~~  113 (122)
T 2cry_A          101 GS-DTEIIRLKEQG  113 (122)
T ss_dssp             CE-EEEEECCCCSC
T ss_pred             Ce-EEEEEEEEECC
Confidence            98 55666666654

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.91  E-value=1.7e-05  Score=66.24  Aligned_cols=75  Identities=25%  Similarity=0.369  Sum_probs=56.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc-ccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD-PIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~-p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+...       ....|.|.++...|+|.|.|.+.|..+. .....+.+
T Consensus        19 ~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v   91 (96)
T 2ens_A           19 GGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-------PSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSI   91 (96)
T ss_dssp             TSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-------CCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEE
T ss_pred             CCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-------CCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEE
Confidence            345778999999999999999999998754444321       2458999999999999999999996443 23334444


Q ss_pred             eec
Q psy10163        428 IVR  430 (615)
Q Consensus       428 ~V~  430 (615)
                      .|.
T Consensus        92 ~V~   94 (96)
T 2ens_A           92 SII   94 (96)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            443

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}

Probab=97.90  E-value=9.1e-06  Score=70.48  Aligned_cols=82  Identities=32%  Similarity=0.587  Sum_probs=60.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC----CceEEecCCeEEEeec-----cccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIVGL-----VRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~----g~~~~~~~gsl~I~~~-----~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+....    .......++.+.+..+     ...|+|.|.|.+.|..|.
T Consensus        18 ~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~   97 (117)
T 2v9t_A           18 DLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE   97 (117)
T ss_dssp             CEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEE
T ss_pred             CEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccc
Confidence            4567789999999999999999999987655543221    2345556666666544     689999999999999998


Q ss_pred             ccccceeeeec
Q psy10163        420 PIRKEFNVIVR  430 (615)
Q Consensus       420 p~~~~~~l~V~  430 (615)
                      .....+.|.+.
T Consensus        98 ~~s~~~~l~~~  108 (117)
T 2v9t_A           98 AVSHDASLEVA  108 (117)
T ss_dssp             EECCCEEEEEC
T ss_pred             eEeeeEEEEhh
Confidence            55555555543

>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A

Probab=97.88  E-value=1e-05  Score=68.02  Aligned_cols=67  Identities=16%  Similarity=0.060  Sum_probs=53.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .+.+.+|+.++|.|.+.+. .|.|.|.|+...+. ..+++.+..++   +|.|.++...|+|.|.|.|.|..
T Consensus        14 ~~~v~~G~~v~l~C~v~~~-~~~v~W~k~g~~i~-~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~   83 (93)
T 1waa_A           14 GVEVFVGETAHFEIELSEP-DVHGQWKLKGQPLA-ASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTK   83 (93)
T ss_dssp             CEEEETTSCEEEEEEESSS-SCCCEEEETTEECC-CBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEE
T ss_pred             ceEEeCCCCEEEEEEECCC-CCeEEEEECCEECc-CCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCc
Confidence            4678899999999999874 48899988766554 33566666555   69999999999999999998853

>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-05  Score=70.46  Aligned_cols=83  Identities=22%  Similarity=0.212  Sum_probs=62.0

Q ss_pred             CcccccCCCeeeeeecccCC---CCCeeeccCCceeecC-C-CCceEEe---------cCCeEEEeeccccCCceeeecC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGY---PIPVYTWSKGEVSIDG-S-DGHYKLT---------LDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~---P~P~i~w~k~~~~l~~-~-~g~~~~~---------~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      ..+.+.+|+.++|.|.+.|.   |.|.|.|.|+.++... . ..++.+.         ...+|.|.++...|+|.|.|.+
T Consensus        20 ~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cev   99 (118)
T 2edn_A           20 DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEV   99 (118)
T ss_dssp             CCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEE
T ss_pred             CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEE
Confidence            34678899999999999875   8999999876533211 1 2233332         1367999999999999999999


Q ss_pred             CCCCCcccccceeeeecc
Q psy10163        414 ANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       414 ~n~~G~p~~~~~~l~V~~  431 (615)
                      .|..|. ....+.|.|.+
T Consensus       100 sn~~g~-~s~~~~L~V~~  116 (118)
T 2edn_A          100 KAKDTC-DSCGFNIDVEA  116 (118)
T ss_dssp             ECSSCE-EEEEECCEEEC
T ss_pred             EEcCCc-EEEEEEEEEEc
Confidence            999996 66666676654

>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A

Probab=97.87  E-value=4e-05  Score=64.75  Aligned_cols=77  Identities=27%  Similarity=0.503  Sum_probs=58.7

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCe---EEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gs---l~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.+.|.| |.|.++...+. ...++.+..++.   |.|.++...|+|.|.|.+++.     ...
T Consensus        16 ~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~~-----~~~   88 (103)
T 2e7b_A           16 KDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLR-PGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSFGDQ-----TTS   88 (103)
T ss_dssp             CCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCC-CSSSEEEEECSSEEEEEECSCCTTTCCCEEEECSSC-----BCC
T ss_pred             ccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECC-CCCcEEEEEcCCEEEEEEccCCcccCEEEEEEECCc-----EEE
Confidence            34678899999999999999999 99987655553 345777777775   999999999999999995443     334


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|.+
T Consensus        89 ~~l~V~~   95 (103)
T 2e7b_A           89 ATLTVTA   95 (103)
T ss_dssp             BCEEEEC
T ss_pred             EEEEEEe
Confidence            4555544

>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=4.2e-05  Score=64.71  Aligned_cols=67  Identities=21%  Similarity=0.319  Sum_probs=54.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+.+|+.++|.|.+.+.|.| |.|.|+...+.. ..++.+..++   .|.|.++...|+|.|.|.+.|..+
T Consensus        20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~   89 (104)
T 2e6p_A           20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEE-SELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA   89 (104)
T ss_dssp             EEEESSSCEECCEECSSTTCC-CEEEETTEECCC-BTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC
T ss_pred             EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCC-CCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE
Confidence            577899999999999999999 999886655543 2455554444   699999999999999999999744

>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=97.81  E-value=3.6e-05  Score=65.17  Aligned_cols=66  Identities=23%  Similarity=0.325  Sum_probs=53.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCC-ceEEecC---CeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-HYKLTLD---GVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g-~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.|+...+..... +|.+..+   ..|.|.++...|+|.|.|.+.|
T Consensus        16 ~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n   85 (103)
T 1x44_A           16 DTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG   85 (103)
T ss_dssp             CEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred             CEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence            466779999999999988 7799999887665543332 5566554   4799999999999999999988

>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}

Probab=97.78  E-value=3.2e-05  Score=65.39  Aligned_cols=79  Identities=18%  Similarity=0.218  Sum_probs=59.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCce--eecC-----CCCceEEe----cCCeEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV--SIDG-----SDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~--~l~~-----~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+...  +...     ..+++.+.    ...+|.|.++...|+|.|.|.+.+ .
T Consensus        15 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~   93 (108)
T 3m45_A           15 NVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-M   93 (108)
T ss_dssp             CEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-S
T ss_pred             eeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-C
Confidence            4677889999999999999999999977432  2211     33466554    345799999999999999999999 5


Q ss_pred             Ccccccceeeee
Q psy10163        418 GDPIRKEFNVIV  429 (615)
Q Consensus       418 G~p~~~~~~l~V  429 (615)
                      +. ....+.|.|
T Consensus        94 ~~-~~~~~~L~V  104 (108)
T 3m45_A           94 PV-KTSKAYLTV  104 (108)
T ss_dssp             SC-EEEEEEEEE
T ss_pred             CC-cEEEEEEEE
Confidence            64 445555555

>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=97.77  E-value=2.6e-05  Score=66.45  Aligned_cols=66  Identities=17%  Similarity=0.265  Sum_probs=54.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+.+.|.| |.|.|+...+.. ..++.+..++   .|.|.++...|+|.|.|.+.|.
T Consensus        17 ~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~   85 (106)
T 2dlt_A           17 DLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRP-SKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY   85 (106)
T ss_dssp             CEEEESSCCEECCCEESCSSCE-EEEEESSCBCCC-CSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred             CeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcC-CCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence            4678899999999999999998 999876555542 3456665555   7999999999999999999987

>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*

Probab=97.76  E-value=1.9e-05  Score=76.32  Aligned_cols=70  Identities=21%  Similarity=0.338  Sum_probs=52.9

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCc-eeec--CCCCceEEecCCeEEE---eeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGE-VSID--GSDGHYKLTLDGVLQI---VGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~-~~l~--~~~g~~~~~~~gsl~I---~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.|.|.|.|+|.++. .++.  ...+++.+..+|+|.|   ..+...|+|.|+|.|.|..|.
T Consensus       116 ~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~  191 (203)
T 4fa8_A          116 SQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEE  191 (203)
T ss_dssp             CCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCE
T ss_pred             EEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCE
Confidence            45678999999999999999999997643 2322  2346777778887665   477899999999999999997

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4

Probab=97.76  E-value=3.4e-05  Score=67.10  Aligned_cols=73  Identities=19%  Similarity=0.273  Sum_probs=54.1

Q ss_pred             CeeeeeecccCCCCCeeeccCCceeecCCC-CceEEe-----cCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        356 NFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLT-----LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       356 ~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~-----~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ...+|.|.+.|+|.|.|.|.|+...+.... .+....     ..+.|.|.++...|+|.|.|.|.|..|. ....+.|.|
T Consensus        21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v   99 (118)
T 1wwc_A           21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHF   99 (118)
T ss_dssp             CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEEEEECC
T ss_pred             cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCe-EeeEEEEEE
Confidence            456788999999999999988665554332 122111     3458999999999999999999999997 455555444

>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A

Probab=97.76  E-value=1.8e-05  Score=72.54  Aligned_cols=81  Identities=25%  Similarity=0.515  Sum_probs=63.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec--C--CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--D--GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~--~--gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++.+..  +  ..|.|.++...|+|.|.|.+.|..|. ....
T Consensus        50 ~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~  127 (154)
T 1fhg_A           50 DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKE-SRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGE-ATCT  127 (154)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-SSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCC-CCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCe-EEEE
Confidence            46778999999999999999999999886655542 34454432  2  37999999999999999999999997 5555


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|..
T Consensus       128 ~~l~V~~  134 (154)
T 1fhg_A          128 AELLVET  134 (154)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            6666643

>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}

Probab=97.75  E-value=2.4e-05  Score=68.90  Aligned_cols=82  Identities=26%  Similarity=0.399  Sum_probs=61.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCC-ceeec------CCCCceEEec----CCeEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSID------GSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l~------~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.|.|.+. ..++.      ...+++.+..    .++|.|.++...|+|.|.|.+.|.
T Consensus         9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~   88 (124)
T 3rbg_A            9 ETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD   88 (124)
T ss_dssp             EEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS
T ss_pred             ccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC
Confidence            346788999999999999999999999752 22111      2345555432    468999999999999999999988


Q ss_pred             CCcccccceeeeecc
Q psy10163        417 IGDPIRKEFNVIVRG  431 (615)
Q Consensus       417 ~G~p~~~~~~l~V~~  431 (615)
                       |. ....+.|.|..
T Consensus        89 -g~-~~~~~~l~V~~  101 (124)
T 3rbg_A           89 -SV-STKEVKVIVLA  101 (124)
T ss_dssp             -SE-EEEEEEEEEEC
T ss_pred             -CC-CcEEEEEEEEe
Confidence             65 55566666643

>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=8.6e-05  Score=62.61  Aligned_cols=76  Identities=22%  Similarity=0.465  Sum_probs=57.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|. .+.|.|.|.|.++...+.. ..++.+..++   .|.|.++...|+|.|.|.++.     ....
T Consensus        16 ~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~-----~~~~   88 (103)
T 2dku_A           16 TNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRA-SGKHQPSQEGLTLRLTISALEKADSDTYTCDIGQ-----AQSR   88 (103)
T ss_dssp             CCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCS-SSSEEEEEETTEEEEEEESCCTTTCSEEEEECSS-----CBCC
T ss_pred             CcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCC-CCeEEEEeCCCEEEEEECCCCcccCEEEEEEeCC-----ceEE
Confidence            3467889999999999 5999999999876655542 3466666666   799999999999999998333     3334


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus        89 ~~l~V~   94 (103)
T 2dku_A           89 AQLLVQ   94 (103)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            555553

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A

Probab=97.73  E-value=9.9e-06  Score=72.53  Aligned_cols=72  Identities=25%  Similarity=0.388  Sum_probs=54.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCC---------CCceEEe------cCCeEEEeeccccCCceeeec
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS---------DGHYKLT------LDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~---------~g~~~~~------~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+...         ..++.+.      ..+.|.|.++...|+|.|.|.
T Consensus        29 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  108 (137)
T 3qr2_A           29 LSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECR  108 (137)
T ss_dssp             CCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEE
T ss_pred             CCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEE
Confidence            3456778999999999999999999997633222110         1122222      346899999999999999999


Q ss_pred             CCCCCCc
Q psy10163        413 AANGIGD  419 (615)
Q Consensus       413 a~n~~G~  419 (615)
                      |.|..|.
T Consensus       109 a~N~~G~  115 (137)
T 3qr2_A          109 ASNDPDR  115 (137)
T ss_dssp             EECCTTS
T ss_pred             EEecCCc
Confidence            9999887

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}

Probab=97.70  E-value=1.3e-05  Score=77.45  Aligned_cols=76  Identities=21%  Similarity=0.274  Sum_probs=58.0

Q ss_pred             ccccCCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.+.+|+.++|.|.+.|. |.|.|+|.|+...+... .++.... ..+|.|.++...|+|.|.|.|.|..|. ....+.|
T Consensus       126 ~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~L  203 (207)
T 3rbs_A          126 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-EKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKL  203 (207)
T ss_dssp             EEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC-CCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEE-EEEEEEE
T ss_pred             cEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC-CceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCE-EEEEEEE
Confidence            457789999999999999 99999998876665432 2332222 236999999999999999999999997 4444433

>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.67  E-value=4e-05  Score=64.61  Aligned_cols=67  Identities=22%  Similarity=0.402  Sum_probs=53.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCC---ceEEecCC---eEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG---HYKLTLDG---VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g---~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+.+.| |.|.|.|+...+.....   ++.+..++   .|.|.++...|+|.|.|.+.|.
T Consensus        17 ~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~   89 (101)
T 2edk_A           17 DQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNGG   89 (101)
T ss_dssp             CEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSSC
T ss_pred             ceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcCC
Confidence            46788999999999999999 99999876555543321   55665555   5899999999999999999873

>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}

Probab=97.67  E-value=1.7e-05  Score=86.24  Aligned_cols=82  Identities=32%  Similarity=0.467  Sum_probs=63.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeec--CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~--~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      ..+.+.+|+.+++.|.+.|.|.|.|+|.++...+.  ...+++.+..+++|.|..+...|+|.|+|.|.|..|. ....+
T Consensus       393 ~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~  471 (477)
T 2id5_A          393 QQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGN-DSMPA  471 (477)
T ss_dssp             EEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEE-EEEEE
T ss_pred             ccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCc-EEEEE
Confidence            34678899999999999999999999987543332  2446777778899999999999999999999999997 45555


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .+.|.
T Consensus       472 ~l~V~  476 (477)
T 2id5_A          472 HLHVR  476 (477)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=97.65  E-value=3.6e-05  Score=73.46  Aligned_cols=82  Identities=37%  Similarity=0.563  Sum_probs=65.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++. ..++.|.|..+...|+|.|.|.|.|..|......+.|.|
T Consensus       120 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V  198 (212)
T 2yd1_A          120 RVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS-LKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYV  198 (212)
T ss_dssp             EEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEE-EETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             eEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEE-ccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEE
Confidence            4567899999999999999999999887666654455553 456799999999999999999999999984334467777


Q ss_pred             ccc
Q psy10163        430 RGN  432 (615)
Q Consensus       430 ~~~  432 (615)
                      .+.
T Consensus       199 ~~~  201 (212)
T 2yd1_A          199 KVR  201 (212)
T ss_dssp             EC-
T ss_pred             Eec
Confidence            554

>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.65  E-value=7.1e-05  Score=63.94  Aligned_cols=68  Identities=21%  Similarity=0.337  Sum_probs=54.3

Q ss_pred             CcccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.|.| .|.|.|+...+.. .+++.+..++   +|.|.++...|+|.|.|.+.+.
T Consensus        16 ~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~-~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~   87 (104)
T 2eny_A           16 KTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGS-SSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGL   87 (104)
T ss_dssp             CCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSB-CSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTE
T ss_pred             CCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCC-CCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCe
Confidence            34678899999999999998854 8999886655542 3466666555   6999999999999999998764

>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A

Probab=97.65  E-value=6.3e-05  Score=63.28  Aligned_cols=63  Identities=21%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~  414 (615)
                      +.+.+|+.++|.|.+. .|.|.|.|.++...+.. ..++.+..++   .|.|.++...|+|.|.|.++
T Consensus        18 ~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ag   83 (100)
T 2yuv_A           18 YQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRP-STKYIFEHKGCQRILFINNCQMTDDSEYYVTAG   83 (100)
T ss_dssp             EEECTTEEEEEEEEES-CTTSCEEEEESSCBCCC-BTTEEEEEETTEEEEEEEEECTTTCCEEEEEET
T ss_pred             cEEcCCCcEEEEEEec-CCCceEEEEECCEECCC-CCCEEEEecCCEEEEEEcCCCcCcCEEEEEEEC
Confidence            5677999999999998 79999999876555432 3466655554   59999999999999999993

>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}

Probab=97.64  E-value=0.00013  Score=60.83  Aligned_cols=65  Identities=22%  Similarity=0.389  Sum_probs=52.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+ +.|.|.|.|.++...+.. ..++.+..++   +|.|.++...|+|.|.|.+++
T Consensus        17 ~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ag~   84 (95)
T 2k1m_A           17 SVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISA-SNKYGLATEGTRHTLTVREVGPADQGSYAVIAGS   84 (95)
T ss_dssp             CEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECS-STTCEEEEETTEEEEEESSCCTTCCSEEEEEETT
T ss_pred             cEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCC-CCcEEEEEcCCEEEEEEcCCCcccCEEEEEEECC
Confidence            4577899999999999 899999999987665543 3455555544   699999999999999999944

>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=97.64  E-value=2.9e-05  Score=69.54  Aligned_cols=82  Identities=20%  Similarity=0.145  Sum_probs=61.2

Q ss_pred             cccccCCCeeeeeecccCC---CCCeeeccCCceeec--CCCCceEEe---------cCCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY---PIPVYTWSKGEVSID--GSDGHYKLT---------LDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~---P~P~i~w~k~~~~l~--~~~g~~~~~---------~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.|.   |.|.|.|.|+.++..  ....++.+.         ...+|+|.++...|+|.|.|.+.
T Consensus        16 ~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevs   95 (126)
T 2dav_A           16 GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVT   95 (126)
T ss_dssp             CCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEE
T ss_pred             CeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEE
Confidence            4568899999999999875   899999987643321  112333332         13579999999999999999999


Q ss_pred             CCCCcccccceeeeecc
Q psy10163        415 NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~~  431 (615)
                      |..|. ....+.|.|..
T Consensus        96 n~~g~-~~~~~~L~V~~  111 (126)
T 2dav_A           96 YKDKF-DSCSFDLEVHE  111 (126)
T ss_dssp             CSSCE-EEECCEEEEEC
T ss_pred             eCCCc-EEEEEEEEEEe
Confidence            99887 66667777754

>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*

Probab=97.62  E-value=3.8e-05  Score=73.79  Aligned_cols=74  Identities=20%  Similarity=0.350  Sum_probs=57.7

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEecCCeEEEeec-cccCCceeeecCCCCCCcccccceeeee
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLTLDGVLQIVGL-VRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~~~gsl~I~~~-~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +|+.++|.|.  |.|.|.|.|.++...+... .++.+....++|.|.++ ...|+|.|.|.|.|..|......+.|.+
T Consensus       127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~  202 (204)
T 1sy6_A          127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA  202 (204)
T ss_dssp             ETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred             cCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence            8999999999  8999999998866555332 33444446889999999 9999999999999999964444454443

>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.62  E-value=6.4e-05  Score=63.41  Aligned_cols=65  Identities=28%  Similarity=0.412  Sum_probs=52.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.|+...+.. ..++.+..++   .|.|.++...|+|.|.|.+.|
T Consensus        17 ~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n   84 (103)
T 2edf_A           17 DQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRK-SQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA   84 (103)
T ss_dssp             CEEECTTSCEEECCEESS-SSCCCCEEESSCBCCC-SSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred             ccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccC-CCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence            467789999999999998 8899999876555532 3466666555   599999999999999999998

>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.60  E-value=0.00012  Score=61.64  Aligned_cols=66  Identities=27%  Similarity=0.389  Sum_probs=53.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+. .|.|.|.|.|+...+... .++.+..++   .|.|.++...|+|.|.|.+.+.
T Consensus        20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~   88 (102)
T 2eo1_A           20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS-SKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ   88 (102)
T ss_dssp             EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCC-SSEEEEEETTEEEEEETTCCTTTCSCEEEEETTE
T ss_pred             cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCC-CCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC
Confidence            45788999999999998 999999998866655433 356555554   7999999999999999999764

>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}

Probab=97.58  E-value=2.3e-05  Score=66.34  Aligned_cols=80  Identities=18%  Similarity=0.387  Sum_probs=56.7

Q ss_pred             ccccCCCeeeeeecccCC--CCCeeeccCCceeecCCC----CceEEe------cCCeEEEeeccccCCceeeecCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGY--PIPVYTWSKGEVSIDGSD----GHYKLT------LDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~~~l~~~~----g~~~~~------~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      +.+.+|+.++|.|.+.+.  |.|.|.|.++...+....    .++...      ..++|.|..+...|+|.|.|.+.|..
T Consensus        20 ~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~   99 (112)
T 3so5_A           20 QSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHF   99 (112)
T ss_dssp             EEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred             cEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCC
Confidence            467789999999999955  468999988655543221    111111      13689999999999999999999998


Q ss_pred             Ccccccceeeee
Q psy10163        418 GDPIRKEFNVIV  429 (615)
Q Consensus       418 G~p~~~~~~l~V  429 (615)
                      |......+.|.|
T Consensus       100 g~~~s~~~~l~V  111 (112)
T 3so5_A          100 GSSYSVXAXLTI  111 (112)
T ss_dssp             EEEECCCEEEEE
T ss_pred             CcEEEeEEEEEe
Confidence            864444454443

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3

Probab=97.55  E-value=5.1e-05  Score=71.06  Aligned_cols=82  Identities=22%  Similarity=0.360  Sum_probs=63.1

Q ss_pred             cccccCCCeeeeeecccC--CCCCeeeccCCceeec---------CCCCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIG--YPIPVYTWSKGEVSID---------GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G--~P~P~i~w~k~~~~l~---------~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .+.+.+|+.++|.|...+  .|.|.|.|.|+...+.         ...+++.+..+++|.|.++...|+|.|.|.+.|..
T Consensus         5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~   84 (176)
T 1hng_A            5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN   84 (176)
T ss_dssp             EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred             EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence            356789999999997655  7788999987653221         23578888888999999999999999999999988


Q ss_pred             Ccc-cccceeeeec
Q psy10163        418 GDP-IRKEFNVIVR  430 (615)
Q Consensus       418 G~p-~~~~~~l~V~  430 (615)
                      |.. ....+.|.|.
T Consensus        85 g~~~~~~~~~l~V~   98 (176)
T 1hng_A           85 GTRILNKALDLRIL   98 (176)
T ss_dssp             CCEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEEe
Confidence            873 2444555554

>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A

Probab=97.55  E-value=8.9e-05  Score=63.10  Aligned_cols=66  Identities=38%  Similarity=0.605  Sum_probs=52.4

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCe---EEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gs---l~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.  |.|.|.++...+. ..+++.+..++.   |.|.++...|+|.|.|.+.|.
T Consensus        16 ~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~   84 (108)
T 2dm7_A           16 KTKEASEGATATLQCELSKV--APVEWKKGPETLR-DGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQE   84 (108)
T ss_dssp             BCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCC-SSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETTE
T ss_pred             CcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECC-CCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcCC
Confidence            34678899999999999876  7899988655443 345666666665   999999999999999999764

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=97.55  E-value=5.9e-05  Score=70.01  Aligned_cols=80  Identities=24%  Similarity=0.434  Sum_probs=62.8

Q ss_pred             ccccCCCeeeeeecccCCC-CCeeeccC----Cceeec-CCCCceEEecCC---eEEEeecc-ccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IPVYTWSK----GEVSID-GSDGHYKLTLDG---VLQIVGLV-RQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P~i~w~k----~~~~l~-~~~g~~~~~~~g---sl~I~~~~-~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.|.| .|.|.|.+    +...+. ...+++.+..++   .|.|..+. ..|+|.|.|.|.|..|.
T Consensus        93 ~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~  172 (184)
T 3b5h_A           93 EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGS  172 (184)
T ss_dssp             EEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEE
T ss_pred             cEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCc
Confidence            3567899999999999999 89999987    444443 234777766555   79999998 99999999999999997


Q ss_pred             ccccceeeeec
Q psy10163        420 PIRKEFNVIVR  430 (615)
Q Consensus       420 p~~~~~~l~V~  430 (615)
                       ....+.|.|.
T Consensus       173 -~~~~~~l~V~  182 (184)
T 3b5h_A          173 -DQAIITLRVR  182 (184)
T ss_dssp             -EEEEEEEEEC
T ss_pred             -ceEEEEEEEe
Confidence             4555666554

>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X

Probab=97.54  E-value=2.1e-05  Score=68.59  Aligned_cols=80  Identities=23%  Similarity=0.322  Sum_probs=56.3

Q ss_pred             ccccCCCeeeeeecccCC--CCCeeeccCCceeec----CCCCceE------EecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGY--PIPVYTWSKGEVSID----GSDGHYK------LTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~~~l~----~~~g~~~------~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      +.+.+|+.++|.|.+.|.  |.+.|.|.++...+.    .......      ....+.|.|.++...|+|.|.|.|.|..
T Consensus        18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~   97 (122)
T 3s35_X           18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL   97 (122)
T ss_dssp             EEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred             EEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence            467789999999999994  457889987433211    0111111      1234579999999999999999999999


Q ss_pred             Ccccccceeeeec
Q psy10163        418 GDPIRKEFNVIVR  430 (615)
Q Consensus       418 G~p~~~~~~l~V~  430 (615)
                      |. ....+.|.|.
T Consensus        98 g~-~~~~~~l~V~  109 (122)
T 3s35_X           98 MT-KKNSTFVRVH  109 (122)
T ss_dssp             CE-EEEEEEEEEE
T ss_pred             Cc-eEEEEEEEEe
Confidence            97 4555666653

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}

Probab=97.52  E-value=8.5e-05  Score=70.30  Aligned_cols=79  Identities=32%  Similarity=0.558  Sum_probs=61.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC-C---eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-G---VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~-g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+... .++.+... +   .|.|..+...|+|.|.|.+.|..|. ....
T Consensus       126 ~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~  203 (212)
T 2r15_A          126 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT-DHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS-ETSD  203 (212)
T ss_dssp             EEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC-CCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCc-EEEE
Confidence            356778999999999999999999998866655433 34443332 3   7999999999999999999999987 4555


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.|
T Consensus       204 ~~l~V  208 (212)
T 2r15_A          204 FTVSV  208 (212)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55554

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}

Probab=97.51  E-value=5.7e-05  Score=70.32  Aligned_cols=80  Identities=31%  Similarity=0.575  Sum_probs=64.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ...++.+..++.|.|..+...|+|.|.|.+.|..|......+.|.|
T Consensus       110 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V  188 (192)
T 2iep_A          110 VKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALR-ENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEV  188 (192)
T ss_dssp             EEEETTSCEEECCEEEEESCCEEEEEETTEECC-CCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             eEEeCCCcEEEEEEEeccCCceEEEEeCCEEcc-CCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence            456688999999999999999999988665554 3356667778899999999999999999999999874344555555


Q ss_pred             c
Q psy10163        430 R  430 (615)
Q Consensus       430 ~  430 (615)
                      .
T Consensus       189 ~  189 (192)
T 2iep_A          189 E  189 (192)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}

Probab=97.49  E-value=0.00011  Score=77.20  Aligned_cols=81  Identities=22%  Similarity=0.314  Sum_probs=64.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCc-eeec--CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGE-VSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~-~~l~--~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.| |.|.|.|.+.. .++.  ...+++.+ .+++|.|..+...|+|.|+|.|.|..|. ....
T Consensus       254 ~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~  330 (361)
T 2xot_A          254 SAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFN-ETLS  330 (361)
T ss_dssp             CCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCE-EEEE
T ss_pred             cCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCc-cEEE
Confidence            3467889999999999999 99999998733 3332  22346666 8889999999999999999999999887 5566


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.+.|.+
T Consensus       331 ~~l~V~~  337 (361)
T 2xot_A          331 VELKVYN  337 (361)
T ss_dssp             EEEEEES
T ss_pred             EEEEEEe
Confidence            6666643

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}

Probab=97.48  E-value=8.6e-05  Score=69.07  Aligned_cols=81  Identities=31%  Similarity=0.593  Sum_probs=64.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC-eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g-sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+....+++.+..++ .|.|.++...|+|.|.|.+.+..|........+
T Consensus        16 ~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l   95 (192)
T 2iep_A           16 TVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGAL   95 (192)
T ss_dssp             EEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEE
T ss_pred             ceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEE
Confidence            3567899999999999999999999998776666556777766555 589999999999999999999877643444444


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        96 ~v   97 (192)
T 2iep_A           96 QV   97 (192)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}

Probab=97.48  E-value=0.00014  Score=67.92  Aligned_cols=79  Identities=32%  Similarity=0.550  Sum_probs=61.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccC--Cceeec--CCCCceEEecCC---eEEEeecc-ccCCceeeecCCCCCCccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSK--GEVSID--GSDGHYKLTLDG---VLQIVGLV-RQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k--~~~~l~--~~~g~~~~~~~g---sl~I~~~~-~~DsG~Y~C~a~n~~G~p~  421 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.+  +...+.  ...+++.+..++   .|.|..+. ..|+|.|.|.+.|..|. .
T Consensus       102 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~-~  180 (190)
T 2wv3_A          102 ENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGS-A  180 (190)
T ss_dssp             EEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCE-E
T ss_pred             ceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCc-c
Confidence            456789999999999999999999987  444443  245677666544   69999999 79999999999999997 4


Q ss_pred             ccceeeee
Q psy10163        422 RKEFNVIV  429 (615)
Q Consensus       422 ~~~~~l~V  429 (615)
                      ...+.|.|
T Consensus       181 ~~~~~l~V  188 (190)
T 2wv3_A          181 SVSTVLRV  188 (190)
T ss_dssp             EEEEEEEE
T ss_pred             eeEEEEEE
Confidence            55555544

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=97.47  E-value=0.00011  Score=70.01  Aligned_cols=82  Identities=26%  Similarity=0.539  Sum_probs=63.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec--C--CeEEEeeccc-cCCceeeecCCCCCCccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--D--GVLQIVGLVR-QDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~--~--gsl~I~~~~~-~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+....+++.+..  +  .+|.|..+.. .|+|.|.|.+.|..|.....
T Consensus        15 ~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~   94 (212)
T 2yd1_A           15 NQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSA   94 (212)
T ss_dssp             CEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEE
T ss_pred             ceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEe
Confidence            35678999999999999999999999887666654556665442  3  3789999998 99999999999988864455


Q ss_pred             ceeeeec
Q psy10163        424 EFNVIVR  430 (615)
Q Consensus       424 ~~~l~V~  430 (615)
                      .+.|.|.
T Consensus        95 ~~~l~V~  101 (212)
T 2yd1_A           95 DATLTIY  101 (212)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEe
Confidence            5555553

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=97.47  E-value=0.00013  Score=73.75  Aligned_cols=79  Identities=23%  Similarity=0.270  Sum_probs=60.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC----CceEEec----------CCeEEEeeccccC-CceeeecCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTL----------DGVLQIVGLVRQD-AGIYVCVAA  414 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~----g~~~~~~----------~gsl~I~~~~~~D-sG~Y~C~a~  414 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+....    +.+....          ...|.|..+...| +|.|.|.|.
T Consensus       219 ~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~  298 (315)
T 1itb_B          219 MEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAK  298 (315)
T ss_dssp             EECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEE
T ss_pred             EEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEe
Confidence            567899999999999999999999988665554332    1222222          2379999999999 999999999


Q ss_pred             CCCCcccccceeeee
Q psy10163        415 NGIGDPIRKEFNVIV  429 (615)
Q Consensus       415 n~~G~p~~~~~~l~V  429 (615)
                      |..|. ....+.|.|
T Consensus       299 N~~G~-~~~~~~l~v  312 (315)
T 1itb_B          299 NTHGI-DAAYIQLIY  312 (315)
T ss_dssp             CTTCC-EEEEEEEEC
T ss_pred             cCCCc-eeEEEEEEe
Confidence            99998 555555554

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=97.47  E-value=0.0001  Score=68.90  Aligned_cols=81  Identities=23%  Similarity=0.374  Sum_probs=62.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--cCC--eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+.....++.+.  .++  .|.|..+...|+|.|.|.+.+..|. ....
T Consensus        13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~   91 (197)
T 2j8h_A           13 NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGS-VSGT   91 (197)
T ss_dssp             CEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEE-EEEE
T ss_pred             ccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCc-eeEE
Confidence            4667899999999999999999999988665555444455443  233  8999999999999999999988776 4455


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus        92 ~~l~V~   97 (197)
T 2j8h_A           92 ASLEVE   97 (197)
T ss_dssp             EEEEEE
T ss_pred             EEEEEc
Confidence            555553

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*

Probab=97.47  E-value=0.00012  Score=69.16  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=61.7

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC-CeEEEeeccccCCceeeecCCCCCCcccccceeeeec
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~-gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      +.+|+.++|.|.+.+.| |.|.|.++...+. ...++.+..+ +.|.|..+...|+|.|.|.+.|..|......+.|.|.
T Consensus       122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~  199 (208)
T 3r4d_A          122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQ-LTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII  199 (208)
T ss_dssp             CCTTCCEEEEEECSCTT-CEEEEEETTEECC-CCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred             EeeCCCEEEEEECCCCC-CceEEEECCEeCC-CCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence            66889999999999988 8999988665554 2345555544 6899999999999999999999999866666666654


Q ss_pred             c
Q psy10163        431 G  431 (615)
Q Consensus       431 ~  431 (615)
                      .
T Consensus       200 ~  200 (208)
T 3r4d_A          200 F  200 (208)
T ss_dssp             -
T ss_pred             e
Confidence            3

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=97.47  E-value=8.8e-05  Score=70.84  Aligned_cols=80  Identities=35%  Similarity=0.480  Sum_probs=61.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCC--CCceEEecC---CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS--DGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~--~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+...  .+++.....   +.|.|..+...|+|.|.|.|.|..|......
T Consensus       118 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~  197 (212)
T 2yd6_A          118 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAP  197 (212)
T ss_dssp             EEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred             eeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccccc
Confidence            45668899999999999999999998866555432  345554433   6899999999999999999999999855555


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.+
T Consensus       198 a~l~~  202 (212)
T 2yd6_A          198 ANLYV  202 (212)
T ss_dssp             EEEEE
T ss_pred             ccEEE
Confidence            55554

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=97.46  E-value=9.3e-05  Score=73.74  Aligned_cols=81  Identities=30%  Similarity=0.481  Sum_probs=62.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-cCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+... .++.+. ..+.|.|..+...|+|.|.|.|.|..|. ....+.|.
T Consensus       204 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~  281 (291)
T 2wim_A          204 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE-DEKQAFLQ  281 (291)
T ss_dssp             CCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT-TTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC-ccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCc-eeeeEEEE
Confidence            45678999999999999999999998866555432 344433 3457999999999999999999999997 66666666


Q ss_pred             eccc
Q psy10163        429 VRGN  432 (615)
Q Consensus       429 V~~~  432 (615)
                      |.+.
T Consensus       282 v~~~  285 (291)
T 2wim_A          282 VFVQ  285 (291)
T ss_dssp             C---
T ss_pred             EEEe
Confidence            6543

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A

Probab=97.46  E-value=7.9e-05  Score=69.37  Aligned_cols=70  Identities=21%  Similarity=0.336  Sum_probs=58.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeec-CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ...+++....++.|.|..+...|+|.|.|.|.|..+.
T Consensus       110 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~  180 (191)
T 1epf_A          110 QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG  180 (191)
T ss_dssp             EECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred             EeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecce
Confidence            456689999999999999999999987655553 3456777778889999999999999999999987653

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=97.46  E-value=8.6e-05  Score=71.07  Aligned_cols=80  Identities=28%  Similarity=0.451  Sum_probs=62.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.... .++.+..   .+.|.|.++...|+|.|.|.+.|..|. ....
T Consensus        27 ~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~  105 (215)
T 3mtr_A           27 AVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQ-ESLE  105 (215)
T ss_dssp             EEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCE-EEEE
T ss_pred             eEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCc-eEEE
Confidence            3678899999999999999999999988665554332 4555443   457999999999999999999999997 4445


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.|
T Consensus       106 ~~l~v  110 (215)
T 3mtr_A          106 FILVQ  110 (215)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55544

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}

Probab=97.42  E-value=8.6e-05  Score=68.77  Aligned_cols=78  Identities=31%  Similarity=0.520  Sum_probs=59.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++.+.. .+.|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus       108 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~  185 (189)
T 2v5t_A          108 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE-NEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE-DEKQAFLQ  185 (189)
T ss_dssp             EETTSCCCEEEECEEEEESCCEEEEEETTEECCC-SSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ccccCCCcEEEEEEEccCCCCeEEEEECCEECcC-CCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCc-eeEEEEEE
Confidence            4567899999999999999999999886655542 23444433 457999999999999999999999887 34444443


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       186 V  186 (189)
T 2v5t_A          186 V  186 (189)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.41  E-value=9.4e-05  Score=64.05  Aligned_cols=78  Identities=19%  Similarity=0.258  Sum_probs=57.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe-cC---CeEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-LD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~-~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+... .++.+. .+   ..|.|.++...|+|.|.|.+++.     ..
T Consensus        21 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~~-----~~   94 (115)
T 2cr6_A           21 EDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN-ELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAGDQ-----RA   94 (115)
T ss_dssp             CEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS-SSCCBCCBTTTBCCBEECSCCTTTCEEEEEEETTE-----EC
T ss_pred             ccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC-CcEEEEEcCCCEEEEEEcCCChhhCEEEEEEECCe-----eE
Confidence            3467889999999999999999999998866555432 333333 21   26999999999999999995543     33


Q ss_pred             ceeeeecc
Q psy10163        424 EFNVIVRG  431 (615)
Q Consensus       424 ~~~l~V~~  431 (615)
                      .+.|.|.+
T Consensus        95 ~~~L~V~~  102 (115)
T 2cr6_A           95 SAALRVTE  102 (115)
T ss_dssp             CEEEEEEC
T ss_pred             EEEEEEEC
Confidence            45555643

>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}

Probab=97.41  E-value=0.0002  Score=64.64  Aligned_cols=78  Identities=19%  Similarity=0.211  Sum_probs=59.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---------CceeecCCCCceEEec----CCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---------GEVSIDGSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---------~~~~l~~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+         +...  ...+++.+..    ..+|.|.++...|+|.|.|.+.+
T Consensus        47 ~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~--~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n  124 (145)
T 1z9m_A           47 DETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRA--LRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFT  124 (145)
T ss_dssp             CEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEEC--SCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred             eEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCcee--cccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEc
Confidence            4678899999999999999999999973         2211  1235665443    45899999999999999999999


Q ss_pred             CCCcccccceeeeec
Q psy10163        416 GIGDPIRKEFNVIVR  430 (615)
Q Consensus       416 ~~G~p~~~~~~l~V~  430 (615)
                      . |. ....+.|.|.
T Consensus       125 ~-~~-~~~~~~L~V~  137 (145)
T 1z9m_A          125 M-PV-RTAKSLVTVL  137 (145)
T ss_dssp             S-SC-EEEEEEEEEE
T ss_pred             C-CC-ceEEEEEEEE
Confidence            8 65 5555666654

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}

Probab=97.40  E-value=8e-05  Score=69.59  Aligned_cols=78  Identities=33%  Similarity=0.474  Sum_probs=60.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.  .........+.|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus       122 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~  198 (201)
T 3s97_C          122 DVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP--STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGK-DKHQARIY  198 (201)
T ss_dssp             CEEEETTCCEEEEEEEEEESCCEEEEEETTBCCC--TTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceEEecCCcEEEEEEccCCCCCceEEEeCCCcCC--CceeecCCCCEEEEccCChhhCEEEEEEEEecCCc-eeeeEEEE
Confidence            4567789999999999999999999987554432  22333445678999999999999999999999887 45455554


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       199 V  199 (201)
T 3s97_C          199 V  199 (201)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X

Probab=97.40  E-value=6.4e-05  Score=70.88  Aligned_cols=77  Identities=19%  Similarity=0.290  Sum_probs=58.1

Q ss_pred             cccCCCeeeeeecc-cCCCCCeeeccCC--ceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        351 EAEEGNFVTLRCIA-IGYPIPVYTWSKG--EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       351 ~~~eg~~~tl~C~~-~G~P~P~i~w~k~--~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+|+.++|.|.+ .|.|.|.|.|.+.  ...+  ..........+.|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus       132 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l  208 (214)
T 3jz7_A          132 SEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM--PTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGS-DQCMLRL  208 (214)
T ss_dssp             CCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC--CGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEE
T ss_pred             ceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc--CccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCc-EEEEEEE
Confidence            35688999999999 8999999999862  2222  112222334568999999999999999999999997 4555666


Q ss_pred             eec
Q psy10163        428 IVR  430 (615)
Q Consensus       428 ~V~  430 (615)
                      .|.
T Consensus       209 ~V~  211 (214)
T 3jz7_A          209 DVV  211 (214)
T ss_dssp             CCB
T ss_pred             EEe
Confidence            554

>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.40  E-value=0.00012  Score=78.65  Aligned_cols=82  Identities=22%  Similarity=0.456  Sum_probs=64.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC-CceeecC--CCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDG--SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~--~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+ +.|.|.|.|.+ +..++..  ..+++....+++|.|.++...|+|.|+|.|.|..|. ....
T Consensus       349 ~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~  426 (440)
T 3zyj_A          349 ADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGN-TTAS  426 (440)
T ss_dssp             CCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECSSCE-EEEE
T ss_pred             cceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcCCCc-EEEE
Confidence            44678899999999999 67999999987 3333322  335777788899999999999999999999999997 5666


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.+.|.+
T Consensus       427 ~~~~v~~  433 (440)
T 3zyj_A          427 ATLNVTG  433 (440)
T ss_dssp             EEEEEC-
T ss_pred             EEEEEec
Confidence            6666644

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}

Probab=97.39  E-value=0.00013  Score=70.86  Aligned_cols=71  Identities=27%  Similarity=0.386  Sum_probs=54.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCC-----------------------CCceEEecCCeEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-----------------------DGHYKLTLDGVLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-----------------------~g~~~~~~~gsl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+...                       ..+......+.|.|..+...|
T Consensus       145 ~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D  224 (250)
T 2fbo_J          145 VVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITD  224 (250)
T ss_dssp             EEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGG
T ss_pred             eEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCccc
Confidence            456778999999999999999999998754333211                       122223344789999999999


Q ss_pred             CceeeecCCCCCCc
Q psy10163        406 AGIYVCVAANGIGD  419 (615)
Q Consensus       406 sG~Y~C~a~n~~G~  419 (615)
                      +|.|.|.|.|..|.
T Consensus       225 ~G~Y~C~a~N~~g~  238 (250)
T 2fbo_J          225 AGRVWCELATGQGE  238 (250)
T ss_dssp             CEEEEEEEESSSSG
T ss_pred             CEEEEEEecCCccc
Confidence            99999999997774

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A

Probab=97.38  E-value=0.00016  Score=68.23  Aligned_cols=82  Identities=28%  Similarity=0.449  Sum_probs=64.1

Q ss_pred             cccccCCCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+ .+.|.|.|.|.++...+.....++ ...++.|.|..+...|+|.|.|.+.|..|......+.|
T Consensus       120 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l  198 (212)
T 2v9r_A          120 DVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERI-TIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAEL  198 (212)
T ss_dssp             CEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTE-EEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred             ceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceE-EccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEE
Confidence            3467789999999999 899999999988766665444443 44577999999999999999999999998743334566


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|.+
T Consensus       199 ~V~~  202 (212)
T 2v9r_A          199 TVLE  202 (212)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            6643

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=97.35  E-value=0.00012  Score=72.97  Aligned_cols=80  Identities=30%  Similarity=0.500  Sum_probs=62.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC---CceEEecC-CeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD---GHYKLTLD-GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~---g~~~~~~~-gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+....   .++.+..+ ..|.|..+...|+|.|.|.|.|..|. ....+
T Consensus       206 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~  284 (291)
T 1qz1_A          206 ATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGE-QDASI  284 (291)
T ss_dssp             EETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             cccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCc-eEEEE
Confidence            456789999999999999999999988665554332   35555444 36999999999999999999999997 55666


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus       285 ~l~V~  289 (291)
T 1qz1_A          285 HLKVF  289 (291)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66553

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=97.34  E-value=0.00017  Score=67.12  Aligned_cols=78  Identities=24%  Similarity=0.451  Sum_probs=60.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ...++.+..++   .|.|..+...|+|.|.|.+.|..|. ....+.
T Consensus       113 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~  190 (194)
T 2a38_A          113 MTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQ-SSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGR-ATSTAE  190 (194)
T ss_dssp             EEECTTEEEEEEEEEEEESCCEEEEEETTEECC-CSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEE-EEEEEE
T ss_pred             EEEcCCCEEEEEEEEEEecCCeEEEEECCEECC-CCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCc-eEEEEE
Confidence            456789999999999999999999988665554 23455555444   6899999999999999999999886 444444


Q ss_pred             eee
Q psy10163        427 VIV  429 (615)
Q Consensus       427 l~V  429 (615)
                      |.|
T Consensus       191 l~V  193 (194)
T 2a38_A          191 LLV  193 (194)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*

Probab=97.34  E-value=0.00017  Score=68.57  Aligned_cols=73  Identities=27%  Similarity=0.488  Sum_probs=60.2

Q ss_pred             ccccCCCeeeeeecc-cCCCCCeeeccCCceeecC-------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCccc
Q psy10163        350 VEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDG-------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       350 v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~-------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~  421 (615)
                      +.+.+|+.++|.|.+ .|.|.|.|.|.++...+..       ...++.+...++|.|..+...|+|.|.|.+.|..|...
T Consensus       118 ~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~  197 (217)
T 2vr9_A          118 TRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRE  197 (217)
T ss_dssp             EEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred             cEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceec
Confidence            456789999999999 8999999999886655541       34566667788999999999999999999999999733


Q ss_pred             c
Q psy10163        422 R  422 (615)
Q Consensus       422 ~  422 (615)
                      .
T Consensus       198 ~  198 (217)
T 2vr9_A          198 S  198 (217)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}

Probab=97.34  E-value=0.00013  Score=60.24  Aligned_cols=56  Identities=23%  Similarity=0.375  Sum_probs=44.8

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeec-cccCCceeeecCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGL-VRQDAGIYVCVAAN  415 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~-~~~DsG~Y~C~a~n  415 (615)
                      .+..|+.++|.|.+.|+| + |+|.|+...|...       .+++|.|.++ ...|+|.|+|.|..
T Consensus        10 v~~~G~~v~L~C~~~g~P-~-i~W~kdg~~l~~~-------~~~~L~I~~v~~~~DsG~Y~C~A~t   66 (82)
T 3r08_E           10 VSISGTSVELTCPLDSDE-N-LKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPA   66 (82)
T ss_dssp             EEEETTEEEEECSSCCCS-S-CEEEETTEECTTC-------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred             EEEcCCeEEEEEECCCCC-c-EEEEECCEECcCC-------CCCEEEECccCccCcCEEEEEEEcc
Confidence            345799999999999999 3 9999866555322       4568999996 67999999999975

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=97.34  E-value=6.9e-05  Score=70.15  Aligned_cols=78  Identities=37%  Similarity=0.565  Sum_probs=60.9

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEee-ccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVG-LVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~-~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ..+++.+..   .+.|.|.. +...|+|.|.|.+.|..|. ....+
T Consensus       114 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~-~~~~~  191 (197)
T 2j8h_A          114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGI-DQKTV  191 (197)
T ss_dssp             EEEETTCCCEEEEEEEEESCCEEEEEESSCEEC-SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             EEEeCCCEEEEEEEEEecCCCcEEEEECCEEee-cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCc-EeEEE
Confidence            456789999999999999999999988665554 334554432   34788888 9999999999999999987 45555


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus       192 ~l~V  195 (197)
T 2j8h_A          192 ELDV  195 (197)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5555

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=97.33  E-value=0.00014  Score=73.28  Aligned_cols=80  Identities=34%  Similarity=0.564  Sum_probs=63.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC-C---eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-G---VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~-g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+. ...++.+... +   .|.|..+...|+|.|.|.|.|..|. ....
T Consensus       231 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~  308 (317)
T 2y25_A          231 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALA-SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS-ETSD  308 (317)
T ss_dssp             EEEEETTSBBCEEEEEECSSCCEEEEEESSSEEC-CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCC-CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCe-EEEE
Confidence            4567789999999999999999999987655554 2345555443 4   7999999999999999999999997 5555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus       309 ~~l~V~  314 (317)
T 2y25_A          309 FTVSVF  314 (317)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            666554

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4

Probab=97.32  E-value=0.0002  Score=66.09  Aligned_cols=83  Identities=24%  Similarity=0.421  Sum_probs=62.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec-----CCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.|.|.++...+... .+..+..     .+.|.|.++...|+|.|.|.+.+..|....
T Consensus        10 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~   88 (182)
T 1rhf_A           10 VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-DQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS   88 (182)
T ss_dssp             EEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-EEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred             cceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-CceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence            3467789999999999999999999998765555432 2222222     257999999999999999999998776455


Q ss_pred             cceeeeecc
Q psy10163        423 KEFNVIVRG  431 (615)
Q Consensus       423 ~~~~l~V~~  431 (615)
                      ..+.|.|..
T Consensus        89 ~~~~l~V~~   97 (182)
T 1rhf_A           89 QPVWLTVEG   97 (182)
T ss_dssp             CCEEEEEEC
T ss_pred             EEEEEEEec
Confidence            566666643

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=97.32  E-value=0.00027  Score=70.16  Aligned_cols=79  Identities=25%  Similarity=0.440  Sum_probs=61.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++.+..+   ..|.|..+...|+|.|.|.|.|..|. ....+.
T Consensus       202 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~  279 (284)
T 2rik_A          202 VETLKGADVHLECELQGTPPFQVSWHKDKRELRS-GKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGS-YTCVGS  279 (284)
T ss_dssp             EEECTTCCEEEEEECBSSSCCEEEEEETTEEECB-TTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEE
T ss_pred             ceecCCCeEEEEEEEEecCCCEEEEEECCEECcC-CCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCc-eeEEEE
Confidence            4567899999999999999999999886655543 344544443   37889999999999999999999997 455555


Q ss_pred             eeec
Q psy10163        427 VIVR  430 (615)
Q Consensus       427 l~V~  430 (615)
                      |.|+
T Consensus       280 l~V~  283 (284)
T 2rik_A          280 ITLK  283 (284)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            5553

>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}

Probab=97.31  E-value=0.00023  Score=61.06  Aligned_cols=75  Identities=36%  Similarity=0.550  Sum_probs=56.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.+.  |.|.|.|+...+. ...++.+..++   .|.|.++...|+|.|.|.+.+     ....+
T Consensus        28 ~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~-----~~~~~   99 (113)
T 2edh_A           28 NEEATEGATAVLRCELSKM--APVEWWKGHETLR-DGDRHSLRQDGARCELQIRGLVAEDAGEYLCMCGK-----ERTSA   99 (113)
T ss_dssp             CCEECTTSCEEEEEEESSC--CCCEEEESSSBCC-CSSSEEEEEETTEEEEEECSCCSTTCEEEEEEETT-----EEEEE
T ss_pred             ceEEeCCCeEEEEEEECCC--CcEEEEECCEECC-CCCcEEEEECCCEEEEEECCCChhhCEEEEEEeCC-----CCEEE
Confidence            4567899999999999876  7899987655553 33677777677   799999999999999999933     33345


Q ss_pred             eeeecc
Q psy10163        426 NVIVRG  431 (615)
Q Consensus       426 ~l~V~~  431 (615)
                      .|.|.+
T Consensus       100 ~l~V~~  105 (113)
T 2edh_A          100 MLTVRA  105 (113)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            555543

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=97.31  E-value=9.8e-05  Score=77.61  Aligned_cols=67  Identities=33%  Similarity=0.503  Sum_probs=52.5

Q ss_pred             cCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeec-cccCCceeeecCCCCCCc
Q psy10163        353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGL-VRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       353 ~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~-~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+|+.+.|.|.+.|+|.|.|+|.|+...+...........+++|.|... ...|+|.|.|.|.|..|.
T Consensus        21 ~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~   88 (384)
T 3kld_A           21 SEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGT   88 (384)
T ss_dssp             CSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEE
T ss_pred             CCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCccc
Confidence            5789999999999999999999887666543322223346788888876 789999999999999886

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=97.31  E-value=0.0002  Score=71.88  Aligned_cols=71  Identities=25%  Similarity=0.411  Sum_probs=57.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--cCC--eEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LDG--VLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.....++.+.  .++  +|.|.++...|+|.|.|.+.|..|.
T Consensus        13 ~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~   87 (305)
T 2nzi_A           13 NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGS   87 (305)
T ss_dssp             CEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEE
T ss_pred             ceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCC
Confidence            4677899999999999999999999988665555444455443  333  7999999999999999999988775

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=97.31  E-value=0.00011  Score=77.29  Aligned_cols=78  Identities=29%  Similarity=0.422  Sum_probs=62.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|+|.|+...+.. ..++. ..++.|.|..+...|+|.|.|.|.|..|. ......|.
T Consensus       304 ~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~-~~~~~-~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~-~~~~a~L~  380 (384)
T 3kld_A          304 DIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLT-RDRIQ-IEQGTLNITIVNLSDAGMYQCVAENKHGV-IFSSAELS  380 (384)
T ss_dssp             CEEECTTCCEEEECEEEEESCCEEEEEETTEECCC-BTTEE-EETTEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceEecCCCCEEEEeECCccCCCeEEEEECCEECCC-CccEE-EeCCEEEEeecChhhCEEEEEEEEeCCce-EEeceEEE
Confidence            35677899999999999999999999886555432 23443 45679999999999999999999999997 55555555


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       381 V  381 (384)
T 3kld_A          381 V  381 (384)
T ss_dssp             E
T ss_pred             E
Confidence            5

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=97.29  E-value=0.00024  Score=74.05  Aligned_cols=70  Identities=34%  Similarity=0.514  Sum_probs=56.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCC--ceeecC----CCCceEEec---CCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKG--EVSIDG----SDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~--~~~l~~----~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|+.++|.|.+.|.|.|.|.|.++  ...+..    ..+++.+..   .++|.|.++...|+|.|.|.|.|..|.
T Consensus        10 ~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~   88 (389)
T 2jll_A           10 ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGG   88 (389)
T ss_dssp             EEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred             eEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCC
Confidence            4566799999999999999999999876  555532    146666553   358999999999999999999998886

>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.26  E-value=0.00033  Score=59.88  Aligned_cols=75  Identities=23%  Similarity=0.323  Sum_probs=56.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.++|.|.+. .|.|.|.|.|+...+.. ..++.+..++   .|.|.++...|+|.|.|.+.|.     ...+.
T Consensus        23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~-----~~~~~   95 (113)
T 2cpc_A           23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVE-SPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDE-----SASFT   95 (113)
T ss_dssp             EEEETTCCEEEEEEES-CTTCCCEEEETTEECCC-BTTBEEEECSSEEEEEESSCCTTTCEEEEEESSSC-----EEEEE
T ss_pred             EEEEcCCeEEEEEEec-CCCCeEEEEECCEECcc-CCCEEEEECCCEEEEEECCCCcccCEEEEEEEecC-----cEEEE
Confidence            5677899999999985 89999999886655543 3455555543   7999999999999999999982     33455


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|..
T Consensus        96 l~V~~  100 (113)
T 2cpc_A           96 VTVTE  100 (113)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            55543

>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A

Probab=97.25  E-value=0.00025  Score=76.50  Aligned_cols=81  Identities=20%  Similarity=0.409  Sum_probs=63.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC-CceeecC--CCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDG--SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~--~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.  |.|.|+|.+ +...+..  ..+++....+++|.|.++...|+|.|+|.|.|..|. ....
T Consensus       360 ~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~  436 (452)
T 3zyi_A          360 RDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGN-SNAS  436 (452)
T ss_dssp             CCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECSSCE-EEEE
T ss_pred             ccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcCCCc-EEEE
Confidence            346788999999999988  999999987 3333322  235677778899999999999999999999999997 5666


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.+.|.+
T Consensus       437 ~~l~v~~  443 (452)
T 3zyi_A          437 AYLNVST  443 (452)
T ss_dssp             EEEEC--
T ss_pred             EEEEEEc
Confidence            6666643

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=97.25  E-value=0.00037  Score=64.72  Aligned_cols=79  Identities=25%  Similarity=0.606  Sum_probs=61.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+. ...++.+..++   +|.|..+...|+|.|.|.+.+..|. ....+
T Consensus        16 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~   93 (197)
T 3lcy_A           16 DVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELI-QSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGE-VETSS   93 (197)
T ss_dssp             CEEEETTSEEEEEEEEEEESCCEEEEEETTEEEC-CCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCE-EEEEE
T ss_pred             ceEEeCCCcEEEEEEEecCCCCEEEEEECCEECC-CCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCc-eeEEE
Confidence            4567899999999999999999999987655553 33555555555   7999999999999999999988776 34444


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .+.|
T Consensus        94 ~l~v   97 (197)
T 3lcy_A           94 KLLL   97 (197)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4444

>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1

Probab=97.24  E-value=0.00068  Score=57.78  Aligned_cols=68  Identities=22%  Similarity=0.330  Sum_probs=51.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+|.|.|.
T Consensus        10 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   89 (108)
T 1jhl_L           10 YLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQ   89 (108)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEE
T ss_pred             eeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEEE
Confidence            35678999999999999999999999652      12221       12356655432   3799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        90 ~~n~   93 (108)
T 1jhl_L           90 QHNE   93 (108)
T ss_dssp             ECSS
T ss_pred             EccC
Confidence            9876

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=97.23  E-value=0.00026  Score=68.43  Aligned_cols=82  Identities=27%  Similarity=0.400  Sum_probs=59.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC----CceeecCCCCceEEe----------cCCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK----GEVSIDGSDGHYKLT----------LDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k----~~~~l~~~~g~~~~~----------~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+    +...+......+...          ....|.|..+...|+|.|.|.+.
T Consensus       123 ~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~  202 (241)
T 3grw_A          123 NQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRAT  202 (241)
T ss_dssp             SEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred             cceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEe
Confidence            3457789999999999999999999986    443333222222111          23468999999999999999999


Q ss_pred             CCCCcccccceeeeecc
Q psy10163        415 NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~~  431 (615)
                      |..|. ....+.|.|.+
T Consensus       203 N~~g~-~~~~~~l~V~~  218 (241)
T 3grw_A          203 NFIGV-AEKAFWLSVHG  218 (241)
T ss_dssp             CSSCE-EEEEEEEEC--
T ss_pred             cCcce-EEEEEEEEecC
Confidence            99997 56667777754

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=97.23  E-value=0.00029  Score=70.18  Aligned_cols=83  Identities=19%  Similarity=0.343  Sum_probs=60.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEE------ecCCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKL------TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~------~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      +.+.+|+.++|.|.+.|+|.|.|.|.++........ .....      .....|.|..+...|+|.|.|.|.|..|. ..
T Consensus       191 ~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~  269 (289)
T 3mjg_X          191 TVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVND-HQ  269 (289)
T ss_dssp             SEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTT-EE
T ss_pred             ceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCC-ce
Confidence            457789999999999999999999985332221111 11111      12357999999999999999999999998 66


Q ss_pred             cceeeeecccc
Q psy10163        423 KEFNVIVRGNY  433 (615)
Q Consensus       423 ~~~~l~V~~~~  433 (615)
                      ....|.+.+..
T Consensus       270 ~~~~l~v~~~~  280 (289)
T 3mjg_X          270 DEKAINITVVE  280 (289)
T ss_dssp             EEEEEEEEEEC
T ss_pred             eEEEEEEEEEe
Confidence            66666665443

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...

Probab=97.22  E-value=0.00026  Score=65.82  Aligned_cols=72  Identities=15%  Similarity=0.194  Sum_probs=57.5

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeeec
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      .+.+|+.++|.|.+.+.|.|.|.|.++...        .....+.|.|..+...|+|.|.|.+.|..+. ....+.|.|.
T Consensus       108 ~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~--------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~-~~~~~~l~V~  178 (184)
T 2ny1_B          108 HLLQGQSLTLTLESPPGSSPSVQCRSPRGK--------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKK-VEFKIDIVVL  178 (184)
T ss_dssp             EEETTCCEEEEEECCTTCCCEEEEECTTSC--------EEEESSEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred             eeecCCCEEEEEEcCCCCCCEEEEEeCCCc--------cccCceEEEEecCCcCCCeEEEEEEEECCce-EEEEEEEEEE
Confidence            457899999999999999999999874321        2446678999999999999999999987765 5566666664


Q ss_pred             c
Q psy10163        431 G  431 (615)
Q Consensus       431 ~  431 (615)
                      +
T Consensus       179 ~  179 (184)
T 2ny1_B          179 A  179 (184)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=97.20  E-value=0.00021  Score=74.78  Aligned_cols=80  Identities=28%  Similarity=0.523  Sum_probs=65.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ...++.+...+.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus       322 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V  399 (403)
T 3laf_A          322 LYAYESMDIEFECAVSGKPVPTVNWMKNGDVVI-PSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGN-AQSSAQLIV  399 (403)
T ss_dssp             EECCTTCCEEECCEEEEESCCEEEEEETTEECC-CSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEC
T ss_pred             eEEecCCeEEEEEEEeeccCCEEEEEECCEECC-CCCcEEEecCccEEEeccccccCEEEEEEEEcCCce-EEEEEEEEE
Confidence            456789999999999999999999988655443 334566667788999999999999999999999997 566666666


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      .+
T Consensus       400 ~~  401 (403)
T 3laf_A          400 PK  401 (403)
T ss_dssp             CC
T ss_pred             eC
Confidence            54

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=97.20  E-value=0.00025  Score=65.93  Aligned_cols=80  Identities=21%  Similarity=0.382  Sum_probs=60.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---CeEEEeeccc-cCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVR-QDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---gsl~I~~~~~-~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+.. ..++.+...   ..|.|..+.. .|+|.|.|.+.|..|. ....
T Consensus       112 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~  189 (197)
T 3lcy_A          112 KYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQN-SENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGT-VDAI  189 (197)
T ss_dssp             EEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-CSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCE-EEEE
T ss_pred             ceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCC-CCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCc-eEEE
Confidence            34567899999999999999999999886665542 334444433   4688888885 8999999999999997 4555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus       190 ~~l~V~  195 (197)
T 3lcy_A          190 LDVEIQ  195 (197)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            555553

>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A

Probab=97.18  E-value=0.00031  Score=61.11  Aligned_cols=80  Identities=23%  Similarity=0.218  Sum_probs=59.4

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceee----------------cC--CCCceEEecCCeEEEeeccccCCceeeec
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI----------------DG--SDGHYKLTLDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l----------------~~--~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+|+.++|.|.....+.+.|.|.|+....                ..  -.||..+..+|+|.|.++...|+|.|+|.
T Consensus        11 ~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Ytc~   90 (111)
T 2qsq_A           11 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFYTLH   90 (111)
T ss_dssp             EEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEEEEE
T ss_pred             eeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEEEEE
Confidence            5678999999998665556679997754211                11  24788899999999999999999999999


Q ss_pred             CCCCCCcccccceeeeec
Q psy10163        413 AANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V~  430 (615)
                      +.+..+......+.|.|.
T Consensus        91 v~~~~~~~~~~~~~L~V~  108 (111)
T 2qsq_A           91 VIKSDLVNEEATGQFRVY  108 (111)
T ss_dssp             EEETTSCCEEEEEEEEEE
T ss_pred             EEeCCCcEEEEEEEEEEe
Confidence            888765423445555553

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=97.18  E-value=0.00012  Score=76.24  Aligned_cols=71  Identities=24%  Similarity=0.520  Sum_probs=57.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecCCeEEEeeccccC------CceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQD------AGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~gsl~I~~~~~~D------sG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.+ +...+....+......+++|.|..+...|      +|.|.|.+.|..|.
T Consensus        13 ~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~   90 (388)
T 2v5m_A           13 RIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGS   90 (388)
T ss_dssp             EEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEE
T ss_pred             eEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCe
Confidence            3556789999999999999999999987 44444433344556678899999999887      99999999998875

>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.17  E-value=0.00051  Score=59.99  Aligned_cols=78  Identities=18%  Similarity=0.309  Sum_probs=58.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--C-------ceEEecCC---eEEEeeccccCCceeeecCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--G-------HYKLTLDG---VLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g-------~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .++.+.+|+.++|.|.+.+  .|.+.|.|+...|..+.  +       ++.+..+|   +|.|.++...|+|.|+|...+
T Consensus        16 ~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~   93 (112)
T 2e6q_A           16 EDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCP   93 (112)
T ss_dssp             CCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEET
T ss_pred             CCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEEC
Confidence            3467889999999999998  77899988666665443  3       78877777   799999999999999774433


Q ss_pred             CCCcccccceeeeecc
Q psy10163        416 GIGDPIRKEFNVIVRG  431 (615)
Q Consensus       416 ~~G~p~~~~~~l~V~~  431 (615)
                      ..    ...+.|.|.+
T Consensus        94 ~~----~ssA~L~V~~  105 (112)
T 2e6q_A           94 GV----QDSAALTIQE  105 (112)
T ss_dssp             TE----EEEEEEEEEC
T ss_pred             Ce----eEEEEEEEeC
Confidence            32    2345555644

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A

Probab=97.17  E-value=0.00024  Score=67.24  Aligned_cols=82  Identities=23%  Similarity=0.332  Sum_probs=62.3

Q ss_pred             cccccCCCeeeeeeccc--CCCCCeeeccC--Cceeec---------CCCCceEEecCCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAI--GYPIPVYTWSK--GEVSID---------GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~--G~P~P~i~w~k--~~~~l~---------~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|...  +.|.|.|.|.+  +...+.         ...+++.+..+|+|.|.++...|+|.|.|.+.+
T Consensus         8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n   87 (182)
T 1hnf_A            8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYD   87 (182)
T ss_dssp             EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred             EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEe
Confidence            46788999999999664  36788999987  544331         245788888999999999999999999999988


Q ss_pred             CCCccc-ccceeeeec
Q psy10163        416 GIGDPI-RKEFNVIVR  430 (615)
Q Consensus       416 ~~G~p~-~~~~~l~V~  430 (615)
                      ..|... ...+.|.|.
T Consensus        88 ~~g~~~~~~~~~L~V~  103 (182)
T 1hnf_A           88 TKGKNVLEKIFDLKIQ  103 (182)
T ss_dssp             TTSCEEEEEEEEEEEE
T ss_pred             CCCceeEEEEEEEEEc
Confidence            877522 234555554

>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A

Probab=97.16  E-value=0.00025  Score=66.91  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=52.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec----CCeEEEeeccccCCceeeecCCCCCCccc----
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAANGIGDPI----  421 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~----  421 (615)
                      +.+.+|+.++|.|.+.+. .|.+.|.|+...+......+.+..    .+.|.|.++...|+|.|.|.|.|..+...    
T Consensus       110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~  188 (198)
T 1ugn_A          110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLP  188 (198)
T ss_dssp             SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCC
T ss_pred             cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCc
Confidence            456789999999999999 789999875444321111111121    26899999999999999999999866311    


Q ss_pred             ccceeeeec
Q psy10163        422 RKEFNVIVR  430 (615)
Q Consensus       422 ~~~~~l~V~  430 (615)
                      ...+.|.|.
T Consensus       189 S~~~~l~V~  197 (198)
T 1ugn_A          189 SDLLELLVL  197 (198)
T ss_dssp             CCCEEEEEE
T ss_pred             CceEEEEec
Confidence            344555553

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G

Probab=97.16  E-value=0.00028  Score=66.28  Aligned_cols=79  Identities=32%  Similarity=0.502  Sum_probs=58.3

Q ss_pred             cccCCCeeeeeecc-cCCCCCeeeccCCceeecCCC--------CceEEe-cCCeEEEeeccccCCceeeecCCCCCCcc
Q psy10163        351 EAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSD--------GHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDP  420 (615)
Q Consensus       351 ~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~--------g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p  420 (615)
                      .+.+|+.++|.|.+ .+.|.|.|.|.++...+....        +++.+. ..+.|.|..+...|+|.|.|.+.|..|..
T Consensus       118 ~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  197 (209)
T 1nbq_A          118 SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP  197 (209)
T ss_dssp             EEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred             ceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence            46789999999997 899999999987554443221        223222 45689999999999999999999999984


Q ss_pred             -cccceeeee
Q psy10163        421 -IRKEFNVIV  429 (615)
Q Consensus       421 -~~~~~~l~V  429 (615)
                       ....+.|.|
T Consensus       198 ~~s~~v~l~V  207 (209)
T 1nbq_A          198 MTSNAVRMEA  207 (209)
T ss_dssp             EECCCBCCEE
T ss_pred             cccccEEEEE
Confidence             244444444

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4

Probab=97.15  E-value=0.00036  Score=65.67  Aligned_cols=81  Identities=23%  Similarity=0.395  Sum_probs=60.7

Q ss_pred             cccCCCeeeeeec-ccCCCCCeeeccCCce-eecCCC--------CceEE-ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCI-AIGYPIPVYTWSKGEV-SIDGSD--------GHYKL-TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~-~~G~P~P~i~w~k~~~-~l~~~~--------g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|. +.+.|.|.|.|.++.. .+....        .++.. ...+.|.|..+...|+|.|.|.|.|..|.
T Consensus       115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~  194 (212)
T 1f97_A          115 SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT  194 (212)
T ss_dssp             EEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSC
T ss_pred             ccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCC
Confidence            4668999999999 7999999999987655 443211        22333 34568999999999999999999999998


Q ss_pred             c-cccceeeeecc
Q psy10163        420 P-IRKEFNVIVRG  431 (615)
Q Consensus       420 p-~~~~~~l~V~~  431 (615)
                      . ....+.|.|.+
T Consensus       195 ~~~s~~~~l~V~~  207 (212)
T 1f97_A          195 AMRSEAAHMDAVE  207 (212)
T ss_dssp             CEECCCEEEEEES
T ss_pred             ccccceEEEEEEE
Confidence            4 35556666654

>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B

Probab=97.14  E-value=0.00023  Score=67.13  Aligned_cols=81  Identities=19%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             cccccCCCeeeeeecccCCCC-----CeeeccC-CceeecCCCCceEEecC------CeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI-----PVYTWSK-GEVSIDGSDGHYKLTLD------GVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~-----P~i~w~k-~~~~l~~~~g~~~~~~~------gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+.+.|.     |.|.|.+ +...+ ...+++.+..+      .+|.|.++...|+|.|.|.+.+.
T Consensus        11 ~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~-~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~   89 (202)
T 3bp6_B           11 VYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTS-LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG   89 (202)
T ss_dssp             EEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CC-CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred             CEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccc-ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence            366789999999999999987     8999987 33322 23355555443      57999999999999999999988


Q ss_pred             CCcccccceeeeecc
Q psy10163        417 IGDPIRKEFNVIVRG  431 (615)
Q Consensus       417 ~G~p~~~~~~l~V~~  431 (615)
                      .+. ....+.|.|..
T Consensus        90 ~~~-~~~~~~l~V~~  103 (202)
T 3bp6_B           90 AAW-DYKYLTVKVKA  103 (202)
T ss_dssp             TEE-EEEEEEEEEEB
T ss_pred             CCc-ceEEEEEEecC
Confidence            775 35556666644

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A

Probab=97.10  E-value=0.00048  Score=63.90  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=61.4

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccC-CceeecCCCCceEEe----cCCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSK-GEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k-~~~~l~~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      .+.+.+|+.++|.|.+.+.| .+.|.|.+ +...+....+++.+.    ..+.|.|.++...|+|.|.|.+.+..+....
T Consensus        11 ~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~   90 (191)
T 1epf_A           11 QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE   90 (191)
T ss_dssp             SEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEE
T ss_pred             CcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceE
Confidence            34677899999999999987 89999987 555555445566553    2358999999999999999999988754344


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.|.|
T Consensus        91 ~~~~l~v   97 (191)
T 1epf_A           91 ATVNVKI   97 (191)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            4455554

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=97.10  E-value=0.00028  Score=70.83  Aligned_cols=78  Identities=22%  Similarity=0.303  Sum_probs=58.2

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecC-CeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLD-GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~-gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.+.+|+.++|.|.+.|.|.| .|.|.++...+.. ..++.+..+ ..|.|.++...|+|.|.|.|.|..|. ....+.|
T Consensus       231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~-~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l  308 (312)
T 2y23_A          231 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISV-DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKL  308 (312)
T ss_dssp             EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEE-ECCC----CEEEEEECSCSGGGCEEEEEEEESTTCC-EEEEEEE
T ss_pred             EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCC-CCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCc-eeeeeEE
Confidence            457789999999999999998 9999876555542 233333322 48999999999999999999999997 4444444


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .+
T Consensus       309 ~i  310 (312)
T 2y23_A          309 VD  310 (312)
T ss_dssp             CS
T ss_pred             Ee
Confidence            33

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}

Probab=97.09  E-value=0.00036  Score=65.26  Aligned_cols=75  Identities=24%  Similarity=0.404  Sum_probs=56.7

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|.|.| .|.|.++...+......   ...+.|.|..+.  |+|.|.|.|.|..|......+.|.
T Consensus       116 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~---~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~  190 (195)
T 2c5d_C          116 RTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH---GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATIT  190 (195)
T ss_dssp             EEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS---SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEE
T ss_pred             EEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc---CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEE
Confidence            566789999999999999999 99998765555432221   345578888776  899999999999997433566665


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       191 V  191 (195)
T 2c5d_C          191 V  191 (195)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}

Probab=97.09  E-value=0.00047  Score=66.14  Aligned_cols=75  Identities=24%  Similarity=0.475  Sum_probs=60.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+...       ....|.|..+...|+|.|.|.+.|..|......+.|.|
T Consensus       128 ~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V  200 (218)
T 3k0w_A          128 QKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII  200 (218)
T ss_dssp             EEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred             eeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEE
Confidence            45778999999999999999999998765554322       23478899999999999999999998876666677766


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      .+
T Consensus       201 ~~  202 (218)
T 3k0w_A          201 DE  202 (218)
T ss_dssp             CC
T ss_pred             eC
Confidence            54

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=97.08  E-value=0.0005  Score=69.23  Aligned_cols=78  Identities=28%  Similarity=0.519  Sum_probs=53.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--cC---CeEEEeeccc-cCCceeeecCCCCCCcccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LD---GVLQIVGLVR-QDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--~~---gsl~I~~~~~-~DsG~Y~C~a~n~~G~p~~  422 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.  .+++...  .+   ..|.|..+.. .|+|.|.|.+.|..|. ..
T Consensus        15 ~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~--~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~-~~   91 (304)
T 2yd9_A           15 DQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVN--SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGE-IT   91 (304)
T ss_dssp             CEEEETTSCEEEEEEEECSSCCEEEEC---------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCE-EC
T ss_pred             ceEecCCCeEEEEEEEEEeCCCeEEEEECCEECC--CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCe-EE
Confidence            4567799999999999999999999988654443  2333332  33   3689999987 9999999999998876 33


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.|.|
T Consensus        92 ~~~~l~V   98 (304)
T 2yd9_A           92 VHAKLTV   98 (304)
T ss_dssp             CEEEEEE
T ss_pred             EEEEEEE
Confidence            3333333

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=97.07  E-value=0.00038  Score=70.50  Aligned_cols=77  Identities=23%  Similarity=0.315  Sum_probs=59.9

Q ss_pred             cccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .+.+|+.++|.|.+.|+|.| .|+|.++...+.    ......+++|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus       228 ~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~----~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V  302 (313)
T 4fqp_A          228 WYLGQNEATLTCDARSNPEPTGYNWSTTMGPLP----PFAVAQGAQLLIRPVDKPINTTLICNVTNALGA-RQAELTVQV  302 (313)
T ss_dssp             EETTCCCEEEEEEEEEESCCCEEEEEETTBSCC----TTEEEETTEEEECCCSSCCEEEEEEEEECSSCE-EEEEEEEEE
T ss_pred             eecCCCeEEEEEEecCCCCCcEEEEEECCEECC----CceEEeCCEEEECcCChhhCEEEEEEEEeCCCc-EEEEEEEEE
Confidence            34567889999999999999 599987543321    123445678999999999999999999999997 566677777


Q ss_pred             ccc
Q psy10163        430 RGN  432 (615)
Q Consensus       430 ~~~  432 (615)
                      ...
T Consensus       303 ~~~  305 (313)
T 4fqp_A          303 KEG  305 (313)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            543

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=97.06  E-value=0.00049  Score=70.08  Aligned_cols=82  Identities=23%  Similarity=0.299  Sum_probs=59.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC----CceeecCCCC-ceEEec----------CCeEEEeeccccCCceeeecC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK----GEVSIDGSDG-HYKLTL----------DGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k----~~~~l~~~~g-~~~~~~----------~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.+    +...+..... .+.+..          ...|.|..+...|+|.|.|.|
T Consensus       231 ~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a  310 (334)
T 1ry7_B          231 NQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLA  310 (334)
T ss_dssp             CEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEE
T ss_pred             ceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEE
Confidence            4567789999999999999999999976    2222221111 111111          127999999999999999999


Q ss_pred             CCCCCcccccceeeeecc
Q psy10163        414 ANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       414 ~n~~G~p~~~~~~l~V~~  431 (615)
                      .|..|. ....+.|.|..
T Consensus       311 ~N~~G~-~~~~~~l~V~~  327 (334)
T 1ry7_B          311 GNSIGF-SHHSAWLVVLP  327 (334)
T ss_dssp             EESSCC-EEEEEEEEEEC
T ss_pred             eCCCCe-EEEEEEEEEEE
Confidence            999997 56666676654

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}

Probab=97.06  E-value=0.00047  Score=63.67  Aligned_cols=70  Identities=23%  Similarity=0.422  Sum_probs=56.2

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceee-cCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l-~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+.|.|.|.|.++...+ ....+++.+..+++|.|..+...|+|.|.|.+.+..+.
T Consensus        12 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~   82 (189)
T 2v5t_A           12 QEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARG   82 (189)
T ss_dssp             EEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred             EEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCC
Confidence            46778999999999999999999998754444 33567788888889999999999999999998877543

>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...

Probab=97.05  E-value=0.00064  Score=64.45  Aligned_cols=81  Identities=23%  Similarity=0.329  Sum_probs=57.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC---ce---ee-------cCCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG---EV---SI-------DGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~---~~---~l-------~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.   ..   ++       ....+++.+...+   +|.|.++...|+|.|.|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   89 (213)
T 3d9a_L           10 TLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ   89 (213)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             cEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence            45678999999999999999999999541   11   11       1112566655333   799999999999999999


Q ss_pred             CCCCCCcccccceeeee
Q psy10163        413 AANGIGDPIRKEFNVIV  429 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V  429 (615)
                      +.+..+........|.|
T Consensus        90 ~~~~~~~~~~~~~~l~V  106 (213)
T 3d9a_L           90 QSNSWPYTFGGGTKLEI  106 (213)
T ss_dssp             ECSSSSCEECCCEEEEE
T ss_pred             eecCCcceeCCCEEEEE
Confidence            99887653233334444

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=97.04  E-value=0.0003  Score=73.34  Aligned_cols=76  Identities=33%  Similarity=0.503  Sum_probs=60.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.  .+++.+ .++.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus       319 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~--~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~V  394 (395)
T 1bih_A          319 IVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLS--GGRATV-TDSGLVIKGVKNGDKGYYGCRATNEHGD-KYFETLVQV  394 (395)
T ss_dssp             EEECTTSCEEEECEEEEESCCCCEEEETTEECC--SSSEEE-ETTEEEESSCCSTTCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred             eEecCCCeEEEEEEECcccCCeeEEEECCEECC--CCceEE-ECCEEEEeeCCcccCEEEEEEEEccCCC-ceEEEEEEE
Confidence            567789999999999999999999988665553  235544 4569999999999999999999999997 444554444

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=97.01  E-value=0.00028  Score=73.11  Aligned_cols=78  Identities=18%  Similarity=0.241  Sum_probs=58.4

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceE-E--------ecCCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYK-L--------TLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~-~--------~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      +.+|+.++|.|.+.|.|.|.|+|.++...+........ .        ...++|.|..+...|+|.|.|.|.|..|. ..
T Consensus       258 ~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~-~~  336 (347)
T 2ifg_A          258 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ-AS  336 (347)
T ss_dssp             CEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEE-EE
T ss_pred             CccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCc-ee
Confidence            34678899999999999999999886655542221111 1        12457999999999999999999999997 55


Q ss_pred             cceeeeec
Q psy10163        423 KEFNVIVR  430 (615)
Q Consensus       423 ~~~~l~V~  430 (615)
                      ..+.+.|.
T Consensus       337 ~~~~l~V~  344 (347)
T 2ifg_A          337 ASIMAAFM  344 (347)
T ss_dssp             EEEEECSC
T ss_pred             eEEEEEec
Confidence            55555553

>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B

Probab=97.00  E-value=0.00082  Score=62.52  Aligned_cols=79  Identities=19%  Similarity=0.191  Sum_probs=58.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceee---cC--------CCCceEEe-cCCeEEEeeccccCCceeeecCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI---DG--------SDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l---~~--------~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      +.+.+|+.++|.|.+.+ |.|.|.|.++...+   ..        -.++..+. .+++|.|.++...|+|.|.|.+.+..
T Consensus         5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~   83 (171)
T 1ccz_A            5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT   83 (171)
T ss_dssp             EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred             EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence            56778999999999854 89999998754322   11        11344442 56899999999999999999999887


Q ss_pred             Ccccccceeeeeccc
Q psy10163        418 GDPIRKEFNVIVRGN  432 (615)
Q Consensus       418 G~p~~~~~~l~V~~~  432 (615)
                      |   ...+.|.|.+.
T Consensus        84 ~---~~~~~L~V~~~   95 (171)
T 1ccz_A           84 D---TMKFFLYVLEM   95 (171)
T ss_dssp             S---CEEEEEEEECC
T ss_pred             C---cEEEEEEEECc
Confidence            7   45566666543

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=97.00  E-value=0.00037  Score=72.49  Aligned_cols=77  Identities=29%  Similarity=0.534  Sum_probs=61.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.. ..++. ..++.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus       304 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~-~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V  380 (382)
T 1cs6_A          304 TEADIGSDLRWSCVASGKPRPAVRWLRDGQPLAS-QNRIE-VSGGELRFSKLVLEDSGMYQCVAENKHGT-VYASAELTV  380 (382)
T ss_dssp             EEEETTCCEEEECEEEEESCCEEEEEETTEECCC-CSSEE-EETTEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred             cEEcCCCeEEEEEEeeeecCCEEEEEECCEECCC-CceEE-EECCEEEECcCCcccCEEEEEEEEeCCCe-EEEEEEEEE
Confidence            4567899999999999999999999886655532 23443 35678999999999999999999999997 455555555

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*

Probab=97.00  E-value=0.00087  Score=64.09  Aligned_cols=80  Identities=14%  Similarity=0.081  Sum_probs=54.4

Q ss_pred             CcccccCC--CeeeeeecccCCCCCeeeccCC---ceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        348 PTVEAEEG--NFVTLRCIAIGYPIPVYTWSKG---EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       348 ~~v~~~eg--~~~tl~C~~~G~P~P~i~w~k~---~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      ..+.+.+|  +.++|.|.+.+ |.|.|+|.+.   ...+. ...++.....+.|.|.++...|+|.|.|.+.+..+....
T Consensus        15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~-~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s   92 (213)
T 2x1w_L           15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVP-DGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS   92 (213)
T ss_dssp             EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECC-CSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEEC
T ss_pred             eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCcccc-CCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEE
Confidence            35678899  99999999987 7799999652   33332 223444556678999999999999999999885443222


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.|.|
T Consensus        93 ~~~~l~v   99 (213)
T 2x1w_L           93 IMYIVVV   99 (213)
T ss_dssp             CCEEEEE
T ss_pred             EEEEEEE
Confidence            2244444

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=97.00  E-value=0.00041  Score=72.15  Aligned_cols=72  Identities=24%  Similarity=0.436  Sum_probs=58.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+..        .++.|.|..+...|+|.|.|.|.|..|. ....+.|.
T Consensus       316 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~--------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~  386 (388)
T 2v5m_A          316 TQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH--------SESVLRIESVKKEDKGMYQCFVRNDRES-AEASAELK  386 (388)
T ss_dssp             EEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEE
T ss_pred             cEEecCCCCEEEEEEeccccCCeEEEEECCEECcc--------CCCEEEEecCChhhCEEEEEEEEcCCCc-EEEEEEEE
Confidence            34677899999999999999999999876554432        2467999999999999999999999997 55555554


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       387 V  387 (388)
T 2v5m_A          387 L  387 (388)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A

Probab=96.98  E-value=0.00034  Score=66.86  Aligned_cols=78  Identities=21%  Similarity=0.375  Sum_probs=56.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEe-cCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.+..   +.. .+..... ..+.|.|.++...|+|.|.|.+.|..|. ....+.|
T Consensus        11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~---~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~~~~~~l   86 (202)
T 1vca_A           11 YLAQIGDSVSLTCSTTGCESPFFSWRTQI---DSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK-LEKGIQV   86 (202)
T ss_dssp             EEEETTSCEEEEEEEESCSSCEEEEEETT---CCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE-EEEEEEE
T ss_pred             EEEcCCCcEEEEEeecCCCCCeEEEECCC---CCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCce-EeeEEEE
Confidence            44558999999999999999999997621   111 1222222 2346999999999999999999998775 4555566


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|..
T Consensus        87 ~V~~   90 (202)
T 1vca_A           87 EIYS   90 (202)
T ss_dssp             EEEB
T ss_pred             EEEe
Confidence            6643

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*

Probab=96.98  E-value=0.00069  Score=62.57  Aligned_cols=76  Identities=16%  Similarity=0.210  Sum_probs=57.5

Q ss_pred             ccccCCCeeeeeecccCCCC-CeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~-P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.+.|. |.|.|.++...+.      .....+.|.|.++...|+|.|.|.+.|..+......+.|.
T Consensus        98 ~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~  171 (175)
T 1fnl_A           98 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK------YFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNIT  171 (175)
T ss_dssp             SEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE------EEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             ceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc------CCCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEE
Confidence            34668999999999998865 5999987554442      1234578999999999999999999998776555566666


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus       172 V~~  174 (175)
T 1fnl_A          172 ITQ  174 (175)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            644

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=96.98  E-value=0.00047  Score=64.07  Aligned_cols=81  Identities=26%  Similarity=0.453  Sum_probs=59.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEE-ecCC--eEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKL-TLDG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~-~~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.... .++.+ ..++  +|.|..+...|+|.|.|.+.+..|. ....
T Consensus        14 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~   92 (194)
T 2a38_A           14 SVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQ-ATST   92 (194)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             ceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCce-EeEE
Confidence            3567789999999999999999999987555443322 23332 2333  7999999999999999999988776 3444


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.+.|.
T Consensus        93 ~~l~v~   98 (194)
T 2a38_A           93 AELLVK   98 (194)
T ss_dssp             EEEEEE
T ss_pred             EEEEEc
Confidence            445554

>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*

Probab=96.97  E-value=0.0012  Score=62.47  Aligned_cols=81  Identities=19%  Similarity=0.246  Sum_probs=57.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC---c---eeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG---E---VSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~---~---~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.   .   .++.       ...+++.+...   .+|.|.++...|+|.|.|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   89 (213)
T 3r06_A           10 SLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQ   89 (213)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred             EEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEe
Confidence            45678999999999999999999999651   1   1111       12356655432   3799999999999999999


Q ss_pred             CCCCCCcccccceeeee
Q psy10163        413 AANGIGDPIRKEFNVIV  429 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V  429 (615)
                      +.+..+........|.|
T Consensus        90 ~~~~~~~~~~~~~~l~V  106 (213)
T 3r06_A           90 QYYNYPWTFGPGTKLEI  106 (213)
T ss_dssp             ECSSSSCEECCCEEEEE
T ss_pred             cccCCceEEcCCceEEE
Confidence            98876543333344444

>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A

Probab=96.97  E-value=0.00046  Score=64.89  Aligned_cols=60  Identities=17%  Similarity=0.261  Sum_probs=49.3

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+   |.|.|+|.|+...+.....     ..+.|.|..+...|+|.|.|.|.|..|.
T Consensus       119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-----~~~~L~i~~v~~~D~G~Y~C~a~N~~g~  178 (186)
T 1jbj_A          119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-----TKNTWNLGNNAKDPRGTYQCQGAKETSN  178 (186)
T ss_dssp             CSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-----CSSCCEEEETTSCCEEEEEEEESSCEEE
T ss_pred             cCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-----CcceEEECCCCcCcCEEEEEEEEcCcCC
Confidence            4589999999998   8899999886655532211     4568999999999999999999999886

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=96.96  E-value=0.00048  Score=71.84  Aligned_cols=79  Identities=18%  Similarity=0.240  Sum_probs=61.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|+|.|.|.|.++...+.... .......++.|.|..+...|+|.|.|.|.|..|. ....+.|.
T Consensus       322 ~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~  400 (404)
T 3p3y_A          322 LILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGY-LLANAFVS  400 (404)
T ss_dssp             EEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCc-EEEEEEEE
Confidence            557789999999999999999999988665554332 2223445678999999999999999999999997 44555544


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       401 V  401 (404)
T 3p3y_A          401 V  401 (404)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*

Probab=96.95  E-value=0.0007  Score=63.71  Aligned_cols=81  Identities=17%  Similarity=0.250  Sum_probs=60.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceee-----------------c-CCCCceEEecCCeEEEeeccccCCceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-----------------D-GSDGHYKLTLDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l-----------------~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      +.+.+|+.++|.|.+.+.|.+.|.|.++....                 . .-.+++.+..+++|.|.++...|+|.|.|
T Consensus         9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C   88 (208)
T 3r4d_A            9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL   88 (208)
T ss_dssp             SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred             ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence            45678999999999999999999997642211                 0 12467777778899999999999999999


Q ss_pred             cCCCCCCcccccceeeeec
Q psy10163        412 VAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       412 ~a~n~~G~p~~~~~~l~V~  430 (615)
                      .+.+..+......+.|.|.
T Consensus        89 ~~~~~~~~~~~~~~~l~V~  107 (208)
T 3r4d_A           89 DMTDENYRRTQATVRFHVH  107 (208)
T ss_dssp             EEECSSCEEEEEEEEEEEE
T ss_pred             EEEcccCceeEEEEEEEec
Confidence            9988754334444555553

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C

Probab=96.95  E-value=0.00061  Score=64.97  Aligned_cols=82  Identities=22%  Similarity=0.303  Sum_probs=59.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC----CceeecCCCCceE---------EecCCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK----GEVSIDGSDGHYK---------LTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k----~~~~l~~~~g~~~---------~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+    +...+........         ....+.|.|..+...|+|.|.|.+.|
T Consensus       127 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n  206 (231)
T 3ojm_B          127 NASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSN  206 (231)
T ss_dssp             CEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEE
T ss_pred             ceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEe
Confidence            4567789999999999999999999976    3333322221111         11234699999999999999999999


Q ss_pred             CCCcccccceeeeecc
Q psy10163        416 GIGDPIRKEFNVIVRG  431 (615)
Q Consensus       416 ~~G~p~~~~~~l~V~~  431 (615)
                      ..|. ....+.|.|..
T Consensus       207 ~~g~-~~~~~~l~V~~  221 (231)
T 3ojm_B          207 YIGQ-ANQSAWLTVLP  221 (231)
T ss_dssp             TTEE-EEEEEEEEEEC
T ss_pred             ccce-EeeEEEEEEec
Confidence            9987 45566666643

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}

Probab=96.94  E-value=0.00062  Score=63.60  Aligned_cols=83  Identities=22%  Similarity=0.276  Sum_probs=61.4

Q ss_pred             cccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCC-CceEEe--c--------CCeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSD-GHYKLT--L--------DGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~-g~~~~~--~--------~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+. |.|.|.|.|.++...+.... .++.+.  .        .+.|.|..+...|+|.|.|.+.+.
T Consensus        11 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~   90 (195)
T 2c5d_C           11 NITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLG   90 (195)
T ss_dssp             CEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEET
T ss_pred             heEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeC
Confidence            45677899999999999 99999999988665554332 122222  2        357999999999999999999998


Q ss_pred             CCcccccceeeeecc
Q psy10163        417 IGDPIRKEFNVIVRG  431 (615)
Q Consensus       417 ~G~p~~~~~~l~V~~  431 (615)
                      .|......+.|.|..
T Consensus        91 ~~~~~~~~~~l~V~~  105 (195)
T 2c5d_C           91 HQTFVSQPGYVGLEG  105 (195)
T ss_dssp             TEEEECCCEEEEECC
T ss_pred             CCceecccEEEEEec
Confidence            776444446666643

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=96.92  E-value=0.00053  Score=65.28  Aligned_cols=80  Identities=28%  Similarity=0.412  Sum_probs=58.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeecc-ccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLV-RQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~-~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+...........   ...|.|.++. ..|+|.|.|.+.|..|. ....+
T Consensus        16 ~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~-~~~~~   94 (212)
T 2yd6_A           16 QTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGE-ISVST   94 (212)
T ss_dssp             EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEE-EEEEE
T ss_pred             eEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCc-EEEEE
Confidence            5677899999999999999999999886655542222222222   2358899995 99999999999998876 44455


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        95 ~l~V~   99 (212)
T 2yd6_A           95 RLTVL   99 (212)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C

Probab=96.91  E-value=0.00049  Score=65.65  Aligned_cols=80  Identities=28%  Similarity=0.441  Sum_probs=59.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--C-ceEEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--G-HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g-~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+....  . ........+|.|.++...|+|.|.|.+.+..|. ....+
T Consensus        28 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~  106 (231)
T 3ojm_B           28 LHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTY  106 (231)
T ss_dssp             CEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             eEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCc-ccccE
Confidence            4567799999999999999999999987554443211  1 123334457999999999999999999988776 34444


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .+.|
T Consensus       107 ~l~V  110 (231)
T 3ojm_B          107 HLDV  110 (231)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4444

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=96.91  E-value=0.00056  Score=71.21  Aligned_cols=72  Identities=26%  Similarity=0.330  Sum_probs=57.5

Q ss_pred             CcccccCCCeeeeeecccC-CCCCeeeccCCceeecCCCCce-EEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        348 PTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHY-KLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g~~-~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+.+|+.++|.|.+.+ .|.|.+.|.++...+.....++ ....+++|.|.++...|+|.|.|.+.|..|.
T Consensus        14 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~   87 (395)
T 1bih_A           14 AEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGV   87 (395)
T ss_dssp             SEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             CceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCe
Confidence            3567789999999999999 9999999988655554333233 3345678999999999999999999988765

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4

Probab=96.90  E-value=0.00058  Score=62.95  Aligned_cols=73  Identities=25%  Similarity=0.456  Sum_probs=54.2

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.|.|.| .|.|.++...+....     .....|.|.++  .|+|.|.|.+.|..|......+.|.
T Consensus       108 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~  180 (182)
T 1rhf_A          108 LAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA-----PSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVH  180 (182)
T ss_dssp             EEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE-----ESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEE
T ss_pred             eEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC-----CCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEE
Confidence            457789999999999999999 999987655443211     14456777777  5899999999999987433455554


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       181 V  181 (182)
T 1rhf_A          181 L  181 (182)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*

Probab=96.90  E-value=0.0013  Score=62.37  Aligned_cols=81  Identities=17%  Similarity=0.248  Sum_probs=57.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC---ce---ee-------cCCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG---EV---SI-------DGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~---~~---~l-------~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.   ..   ++       ....+++.+...+   +|.|.++...|+|.|.|.
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   88 (210)
T 1lk3_L            9 ALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ   88 (210)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             cEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEE
Confidence            45678999999999999999999999551   11   11       1113566555333   799999999999999999


Q ss_pred             CCCCCCcccccceeeee
Q psy10163        413 AANGIGDPIRKEFNVIV  429 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V  429 (615)
                      +.+..+........|.|
T Consensus        89 ~~~~~~~~~~~~~~l~V  105 (210)
T 1lk3_L           89 QSWNGPLTFGAGTKLEL  105 (210)
T ss_dssp             ECSSSSCEECCCEEEEE
T ss_pred             EEcCCCceeCCCEEEEE
Confidence            99887642222334444

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=96.89  E-value=0.00063  Score=65.63  Aligned_cols=81  Identities=30%  Similarity=0.500  Sum_probs=60.5

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCC---CceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD---GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~---g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+....   .........+|.|.++...|+|.|.|.+.+..|. ....
T Consensus        23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~~~  101 (241)
T 3grw_A           23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQT  101 (241)
T ss_dssp             CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCc-eEEE
Confidence            34678899999999999999999999987554443211   2233445568999999999999999999988775 3444


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.+.|
T Consensus       102 ~~l~V  106 (241)
T 3grw_A          102 YTLDV  106 (241)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            44444

>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*

Probab=96.89  E-value=0.00059  Score=66.43  Aligned_cols=79  Identities=24%  Similarity=0.293  Sum_probs=58.7

Q ss_pred             CCcccccCCCeeeeeecccCCCCC--eeeccCCceeecCCCCceE-EecCCeEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIP--VYTWSKGEVSIDGSDGHYK-LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P--~i~w~k~~~~l~~~~g~~~-~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      +..+.+.+|+.++|.|.+ +.|.|  .|.|.+...    ..++.. ......|.|.++...|+|.|.|.+.++.+. ...
T Consensus        14 ~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~----~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~-~~~   87 (210)
T 1gsm_A           14 EPVVAVALGASRQLTCRL-ACADRGASVQWRGLDT----SLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT-FQH   87 (210)
T ss_dssp             CSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTT----TTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-EEE
T ss_pred             CCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccc----ccCcEEecCCccEEEECccCcccCceEEEEEEeCCCc-eEE
Confidence            344678899999999999 99999  999987322    224433 233457999999999999999999998765 444


Q ss_pred             ceeeeecc
Q psy10163        424 EFNVIVRG  431 (615)
Q Consensus       424 ~~~l~V~~  431 (615)
                      .+.|.|..
T Consensus        88 ~~~ltV~~   95 (210)
T 1gsm_A           88 TVQLLVYA   95 (210)
T ss_dssp             EEEEEEEB
T ss_pred             EEEEEEEe
Confidence            55565543

>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B

Probab=96.88  E-value=0.00077  Score=57.91  Aligned_cols=80  Identities=23%  Similarity=0.363  Sum_probs=56.6

Q ss_pred             cccccCCCeeeeeecccCCCC----CeeeccCCc--------eee------------cCCCCceEEecC------CeEEE
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI----PVYTWSKGE--------VSI------------DGSDGHYKLTLD------GVLQI  398 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~----P~i~w~k~~--------~~l------------~~~~g~~~~~~~------gsl~I  398 (615)
                      .+.+.+|+.++|.|.+.+.|.    +.|.|.+..        .++            ..-.++..+..+      .+|.|
T Consensus        14 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I   93 (126)
T 1eaj_A           14 MIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINV   93 (126)
T ss_dssp             EEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEE
T ss_pred             eEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEE
Confidence            456789999999999987765    359996532        221            111356666554      68999


Q ss_pred             eeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       399 ~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .++...|+|.|.|.+.+..+. ....+.|.|
T Consensus        94 ~~v~~~D~G~Y~C~v~~~~~~-~~~~~~L~V  123 (126)
T 1eaj_A           94 TNLQLSDIGTYQCKVKKAPGV-ANKKIHLVV  123 (126)
T ss_dssp             CSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred             CcCChHHCeEEEEEEEcCCcc-CCcEEEEEE
Confidence            999999999999999887664 344445544

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=96.87  E-value=0.00088  Score=74.38  Aligned_cols=80  Identities=20%  Similarity=0.217  Sum_probs=60.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.|+...+.....++.+...   +.|+|..+...|+|.|.|.|.|..|. .+..+
T Consensus       486 ~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~a  564 (570)
T 3b43_A          486 DISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGT-QECFA  564 (570)
T ss_dssp             CBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCE-EEEEE
T ss_pred             CceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcE-EEEEE
Confidence            356778999999999999999999998864333223344444322   37999999999999999999999998 55556


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus       565 ~L~V  568 (570)
T 3b43_A          565 TLSV  568 (570)
T ss_dssp             EECC
T ss_pred             EEEE
Confidence            5555

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=96.87  E-value=0.0012  Score=65.61  Aligned_cols=70  Identities=21%  Similarity=0.282  Sum_probs=55.1

Q ss_pred             ccccCCCeeeeeecccCCC-CCeeeccC-CceeecCCCCceEEe----cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IPVYTWSK-GEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P~i~w~k-~~~~l~~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+.| .|.|.|.+ +...+.....++.+.    ..+.|.|.++...|+|.|.|.+.+..|.
T Consensus        12 ~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~   87 (291)
T 1qz1_A           12 GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT   87 (291)
T ss_dssp             EEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred             ceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCC
Confidence            4577899999999999987 79999987 444444444555443    2357999999999999999999988764

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=96.87  E-value=0.0012  Score=67.55  Aligned_cols=65  Identities=18%  Similarity=0.200  Sum_probs=54.7

Q ss_pred             cccCCCeeeeeecccCCC-CCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYP-IPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+|+.++|.|.+.|.| .|.|.|.|+...+.....++... .+.|.|.++...|+|.|.|.+.|.
T Consensus       139 ~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~n~  204 (329)
T 3oq3_B          139 GTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLIIHNPELEDSGRYDCYVHYD  204 (329)
T ss_dssp             TSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEEEECSCCGGGCEEEEEEEEEC
T ss_pred             EEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-CCEEEEeecChhhCEEEEEEEEec
Confidence            456799999999999999 99999998766664444556555 689999999999999999999986

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=96.86  E-value=0.00069  Score=70.71  Aligned_cols=81  Identities=32%  Similarity=0.516  Sum_probs=66.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+.....++.....+.|.|..+...|+|.|.|.+.|..|. ....+.|.
T Consensus       230 ~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~  308 (403)
T 3laf_A          230 NVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNEN-ISASAELT  308 (403)
T ss_dssp             CEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCc-eEEEEEEE
Confidence            34567899999999999999999999887766665566777777889999999999999999999998876 45555555


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus       309 V~  310 (403)
T 3laf_A          309 VL  310 (403)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=96.85  E-value=0.0012  Score=73.34  Aligned_cols=69  Identities=26%  Similarity=0.448  Sum_probs=54.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe---cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|+.+.|.|.+.|.|.|.|.|.|+...+... .++.+.   ..+.|.|.++...|+|.|.|.|.|..|.
T Consensus       301 ~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~  372 (570)
T 3b43_A          301 RIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-SKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGS  372 (570)
T ss_dssp             CCEESSCEEEEEEEEESSSSCEEEEEETTEECCCS-SSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBC
T ss_pred             cEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC-CcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCE
Confidence            44678999999999999999999998866555432 233322   2346999999999999999999999886

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}

Probab=96.82  E-value=0.0012  Score=63.25  Aligned_cols=75  Identities=28%  Similarity=0.380  Sum_probs=58.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+...       ..+.|.|.++...|+|.|.|.+.+..|......+.|.
T Consensus        27 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~   99 (218)
T 3k0w_A           27 SKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLD   99 (218)
T ss_dssp             CEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEE
T ss_pred             CeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEE
Confidence            456778999999999999999999998765444321       2457899999999999999999998876445555555


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus       100 V~  101 (218)
T 3k0w_A          100 VC  101 (218)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*

Probab=96.81  E-value=0.0011  Score=59.39  Aligned_cols=68  Identities=21%  Similarity=0.392  Sum_probs=52.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc-----eeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE-----VSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~-----~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+.+|+.++|.|.+.+.  +.|.|.+..     .++....+++.+..++   +|.|.++...|+|.|.|.+.|..|
T Consensus        26 ~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g  101 (133)
T 3khq_A           26 FAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSA  101 (133)
T ss_dssp             EEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred             eEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence            4667899999999999988  899996531     1222245677765544   599999999999999999998765

>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*

Probab=96.80  E-value=0.0018  Score=63.09  Aligned_cols=81  Identities=22%  Similarity=0.331  Sum_probs=57.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.      ..++.       ...+++.....+   +|.|.++...|+|.|.|.
T Consensus        13 ~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   92 (250)
T 3esu_F           13 SLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQ   92 (250)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEE
Confidence            45678999999999999999999999752      11111       123555444333   799999999999999999


Q ss_pred             CCCCCCcccccceeeee
Q psy10163        413 AANGIGDPIRKEFNVIV  429 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V  429 (615)
                      +.+..+........|.|
T Consensus        93 ~~n~~~~~~~~~~~l~V  109 (250)
T 3esu_F           93 QGNTLPWTFGGGTKLEI  109 (250)
T ss_dssp             ECSSSSCEECCCEEEEE
T ss_pred             EeeCCCceECCCEEEEE
Confidence            99876642333333444

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=96.79  E-value=0.00073  Score=68.60  Aligned_cols=76  Identities=25%  Similarity=0.295  Sum_probs=60.1

Q ss_pred             cccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEecCCeEEEe-eccccCCceeeecCCCCCCcccccceeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIV-GLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~~~gsl~I~-~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+|+.++|.|.+.|+|.|. |.|.++...+..  .  ....++.|.|. .+...|+|.|.|.|.|..|. ....+.|.
T Consensus       243 ~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~--~--~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~  317 (331)
T 3u83_A          243 WYLQRMDVKLTCKADANPPATEYHWTTLNGSLPK--G--VEAQNRTLFFKGPINYSLAGTYICEATNPIGT-RSGQVEVN  317 (331)
T ss_dssp             CBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCT--T--EEEETTEEEECSCCCGGGCEEEEEEEEETTEE-EEEEEEEC
T ss_pred             eEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccc--c--ceecCcEEEEeCCCccccCeEEEEEEEecccc-ceEEEEEE
Confidence            456789999999999999998 999875433321  1  23456789999 89999999999999999997 56667777


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus       318 V~~  320 (331)
T 3u83_A          318 ITE  320 (331)
T ss_dssp             CBC
T ss_pred             Eec
Confidence            754

>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}

Probab=96.78  E-value=0.00038  Score=65.64  Aligned_cols=68  Identities=12%  Similarity=0.018  Sum_probs=41.9

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec----CCeEEEeeccccCCceeeecCCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      ..+.+|+.++|.|.+.+.| |.+.|.|+...+...........    .+.|.|.++...|+|.|.|.|.|..+
T Consensus       109 ~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~  180 (196)
T 2d3v_A          109 PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI  180 (196)
T ss_dssp             --------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred             ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence            3567899999999999999 99999875433211000001111    25789999999999999999998754

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=96.78  E-value=0.00069  Score=70.37  Aligned_cols=67  Identities=36%  Similarity=0.609  Sum_probs=54.5

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEecCCeEEEeeccc-cCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLTLDGVLQIVGLVR-QDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~~~gsl~I~~~~~-~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|+|.|.|.|.++...+... ..++.+ .+++|.|.++.. .|+|.|.|.+.|..|.
T Consensus        19 ~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~   87 (382)
T 1cs6_A           19 GSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRL-VAGDLVISNPVKAKDAGSYQCVATNARGT   87 (382)
T ss_dssp             TCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEE-ETTEEEEESCCHHHHCEEEEEEEEETTEE
T ss_pred             CCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEe-eCCeEEEecccccccCEEEEEEEEcCCcE
Confidence            368899999999999999999998866555433 345544 578999999986 9999999999988774

>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A

Probab=96.78  E-value=0.0016  Score=61.00  Aligned_cols=59  Identities=22%  Similarity=0.335  Sum_probs=47.9

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEee-ccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVG-LVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~-~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+|+.++|.|.+.+ |.+ |.|.|+...+...       .+++|.|.+ +...|+|.|.|.|.|..|.
T Consensus        11 ~~~G~~v~L~C~~~~-~~~-i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~   70 (186)
T 1jbj_A           11 SISGTSVELTCPLDS-DEN-LKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKN   70 (186)
T ss_dssp             EEETTEEEEECSSCC-CTT-CEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCC
T ss_pred             EeCCcEEEEEEeCCC-CCc-eEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCc
Confidence            367999999999998 544 9998865555432       345799999 9999999999999999886

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}

Probab=96.77  E-value=0.00062  Score=63.40  Aligned_cols=77  Identities=19%  Similarity=0.203  Sum_probs=56.7

Q ss_pred             ccccC-CCeeeeeecccCCCC--CeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEE-GNFVTLRCIAIGYPI--PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~e-g~~~tl~C~~~G~P~--P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+ |+.++|.|.+.+.|.  |.|.|.++...+.... ..  ..++.|.|.++...|+|.|.|.+.+. +. ....+.
T Consensus        12 ~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~-~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~-~~~~~~   86 (190)
T 2wv3_A           12 VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATR-KN--ASNMEYRINKPRAEDSGEYHCVYHFV-SA-PKANAT   86 (190)
T ss_dssp             EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCC-BC--CSEEEEEESSCCGGGCEEEEEEEEET-TE-EEEEEE
T ss_pred             EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccc-eE--eccEEEEEecCCcccCEEEEEEEEeC-Cc-ccccEE
Confidence            44445 999999999999987  8999988655553221 11  14568999999999999999999987 54 455555


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|..
T Consensus        87 l~V~~   91 (190)
T 2wv3_A           87 IEVKA   91 (190)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            55543

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A

Probab=96.76  E-value=0.001  Score=60.67  Aligned_cols=74  Identities=24%  Similarity=0.298  Sum_probs=54.5

Q ss_pred             ccccCCCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+ .+.|.|.+.|.++...+.      .....+.|.|..+...|+|.|.|.+.|..|......+.|.
T Consensus        95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~  168 (170)
T 3ry4_A           95 LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK------FSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTIT  168 (170)
T ss_dssp             SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE------EESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             ceeecCCeEEEEEECCCCCCCceEEEEECCeEcc------ccCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEE
Confidence            345678999999999 566789999987544432      1123457899999999999999999998886444444444


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       169 V  169 (170)
T 3ry4_A          169 V  169 (170)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}

Probab=96.76  E-value=0.00098  Score=62.22  Aligned_cols=72  Identities=25%  Similarity=0.249  Sum_probs=54.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc-ccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD-PIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~-p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.+ |.|.+.|.|+...        .....+.|.|.++...|+|.|.|.+.|..|. .....+.|.
T Consensus        17 ~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~   87 (184)
T 2gi7_A           17 SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELV   87 (184)
T ss_dssp             SEEETTCCEEEEEECST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEE
T ss_pred             ccccCCCcEEEEEeCCC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEE
Confidence            35778999999999988 8899999764321        2345678999999999999999999987663 223345555


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        88 V~   89 (184)
T 2gi7_A           88 AT   89 (184)
T ss_dssp             EE
T ss_pred             ec
Confidence            54

>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B

Probab=96.76  E-value=0.001  Score=57.20  Aligned_cols=69  Identities=25%  Similarity=0.411  Sum_probs=51.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC----c--eee-----cCCCCceEEecCC------eEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG----E--VSI-----DGSDGHYKLTLDG------VLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~----~--~~l-----~~~~g~~~~~~~g------sl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+.+ +.|.|.+.    .  .++     ....+++.+..+.      +|.|.++...|+|.|.|
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   88 (113)
T 1h5b_A           10 ALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFC   88 (113)
T ss_dssp             EEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEE
T ss_pred             EEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEE
Confidence            45678999999999998876 78999542    1  111     1124667665543      79999999999999999


Q ss_pred             cCCCCCC
Q psy10163        412 VAANGIG  418 (615)
Q Consensus       412 ~a~n~~G  418 (615)
                      .+.+..|
T Consensus        89 ~~~n~~~   95 (113)
T 1h5b_A           89 AAEASSG   95 (113)
T ss_dssp             EEECSSS
T ss_pred             EEecCCC
Confidence            9988755

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*

Probab=96.75  E-value=0.00098  Score=61.48  Aligned_cols=75  Identities=19%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             cccCCCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        351 EAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       351 ~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .+.+|+.++|.|.+ .+.|.|.+.|.++...+...      ...+.|.|.++...|+|.|.|.+.|..+......+.|.|
T Consensus        96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V  169 (176)
T 1f2q_A           96 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITV  169 (176)
T ss_dssp             EEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             eeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee------cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEE
Confidence            45689999999999 57888999998765444211      234689999999999999999999875554455566666


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      .+
T Consensus       170 ~~  171 (176)
T 1f2q_A          170 IK  171 (176)
T ss_dssp             EC
T ss_pred             ec
Confidence            44

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}

Probab=96.74  E-value=0.00074  Score=64.91  Aligned_cols=68  Identities=24%  Similarity=0.209  Sum_probs=52.3

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecC---C--eEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLD---G--VLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~---g--sl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.||+.+.|.|.+. +.|.|.|+|.++...+... .++.+..+   +  +|.|.++...|+|.|+|.+.|+
T Consensus        10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~-~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng   83 (207)
T 3rbs_A           10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-PKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG   83 (207)
T ss_dssp             EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSS-SSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEET
T ss_pred             CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccC-CCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECC
Confidence            346778899999999886 5899999998866666433 34443333   2  5899999999999999998884

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R

Probab=96.74  E-value=0.00023  Score=81.36  Aligned_cols=81  Identities=25%  Similarity=0.420  Sum_probs=0.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|+|.|.|+|.|+...+.......+....+.|.|..+...|+|.|.|.|.|..|. ....+.|.|
T Consensus       676 ~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V  754 (772)
T 3v2a_R          676 QTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGC-AKVEAFFII  754 (772)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcc-eeEEEEEEE
Confidence            5677899999999999999999999986655543322222223568999999999999999999999998 566777777


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      .+
T Consensus       755 ~~  756 (772)
T 3v2a_R          755 EG  756 (772)
T ss_dssp             --
T ss_pred             EC
Confidence            55

>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1

Probab=96.74  E-value=0.0027  Score=54.10  Aligned_cols=68  Identities=21%  Similarity=0.251  Sum_probs=50.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++..       ..+++.+...   .+|.|.++...|+|.|.|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   89 (108)
T 1qfw_M           10 SMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHCG   89 (108)
T ss_dssp             CEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEEE
T ss_pred             eEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEEE
Confidence            35678999999999999988889999542      122211       1355654432   2699999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        90 ~~~~   93 (108)
T 1qfw_M           90 QTYN   93 (108)
T ss_dssp             ECSS
T ss_pred             EccC
Confidence            8764

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=96.74  E-value=0.0016  Score=64.39  Aligned_cols=80  Identities=24%  Similarity=0.409  Sum_probs=59.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe---cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      ...+.+|+.++|.|.+.|.|.|.|.|.++...+.... ++...   ....|.|.++...|+|.|.|.+.|..|. ....+
T Consensus       108 ~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~  185 (284)
T 2rik_A          108 SRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESS-KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGS-ASSST  185 (284)
T ss_dssp             EEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEE
T ss_pred             ceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCC-cEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCc-eeEEE
Confidence            3456789999999999999999999987655554322 22222   2346899999999999999999999886 44455


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus       186 ~l~V~  190 (284)
T 2rik_A          186 SLKVK  190 (284)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*

Probab=96.74  E-value=0.0026  Score=53.49  Aligned_cols=70  Identities=24%  Similarity=0.241  Sum_probs=49.8

Q ss_pred             ccccCCCeeeeeecccCCCCC---eeeccCCc--------eee--cC------CCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP---VYTWSKGE--------VSI--DG------SDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P---~i~w~k~~--------~~l--~~------~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|...+.+.+   .|.|.+..        .++  +.      ..+++.+..+     .+|.|.++...|
T Consensus         4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D   83 (109)
T 2oyp_A            4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDD   83 (109)
T ss_dssp             EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred             EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChh
Confidence            557789999999998876543   48997633        111  11      1345554332     489999999999


Q ss_pred             CceeeecCCCCCCc
Q psy10163        406 AGIYVCVAANGIGD  419 (615)
Q Consensus       406 sG~Y~C~a~n~~G~  419 (615)
                      +|.|.|.+.+..+.
T Consensus        84 ~G~Y~C~v~~~~~~   97 (109)
T 2oyp_A           84 HGTYCCRIQFPGLM   97 (109)
T ss_dssp             CEEEEEEECCSSTT
T ss_pred             CeEEEEEEEcCCcc
Confidence            99999998877544

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*

Probab=96.73  E-value=0.00073  Score=64.61  Aligned_cols=80  Identities=23%  Similarity=0.326  Sum_probs=55.5

Q ss_pred             ccccCCCeeeeeecccCCCC--CeeeccCCceeecCC--------CCc--eEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI--PVYTWSKGEVSIDGS--------DGH--YKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~--P~i~w~k~~~~l~~~--------~g~--~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      +.+.+|+.++|.|.+.|.|.  +.|.|.++...+...        ...  ........|.|.++...|+|.|.|.|.|..
T Consensus       115 ~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~  194 (213)
T 2x1w_L          115 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL  194 (213)
T ss_dssp             EEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred             eEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCC
Confidence            46778999999999998664  479997743221100        000  001112369999999999999999999999


Q ss_pred             Ccccccceeeeec
Q psy10163        418 GDPIRKEFNVIVR  430 (615)
Q Consensus       418 G~p~~~~~~l~V~  430 (615)
                      |. ....+.|.|.
T Consensus       195 g~-~~~~~~l~V~  206 (213)
T 2x1w_L          195 MT-KKNSTFVRVH  206 (213)
T ss_dssp             CE-EEEEEEEEEE
T ss_pred             Cc-EEEEEEEEEe
Confidence            97 4666666664

>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*

Probab=96.73  E-value=0.00085  Score=64.50  Aligned_cols=81  Identities=23%  Similarity=0.182  Sum_probs=57.0

Q ss_pred             ccccCCCeeeeee---cccCCCCCeeeccCCc-----eee-----------cCCCCceEEec---CCeEEEeeccccCCc
Q psy10163        350 VEAEEGNFVTLRC---IAIGYPIPVYTWSKGE-----VSI-----------DGSDGHYKLTL---DGVLQIVGLVRQDAG  407 (615)
Q Consensus       350 v~~~eg~~~tl~C---~~~G~P~P~i~w~k~~-----~~l-----------~~~~g~~~~~~---~gsl~I~~~~~~DsG  407 (615)
                      +.+.+|+.++|.|   .+.+.|.|.|+|.|..     .++           ....+++.+..   ...|.|.++...|+|
T Consensus         3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G   82 (203)
T 4fa8_A            3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG   82 (203)
T ss_dssp             CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence            4567899999999   5778999999997631     111           01123333222   236999999999999


Q ss_pred             eeeecCCCCCCcccccceeeeecc
Q psy10163        408 IYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       408 ~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.+.|+.|. ....+.|.|..
T Consensus        83 ~Y~C~a~n~~g~-~~~~~~l~V~~  105 (203)
T 4fa8_A           83 NYLCRMKLGETE-VTKQEHLSVVK  105 (203)
T ss_dssp             EEEEEEEETTEE-EEEEEEEEEEE
T ss_pred             EEEEEEEcCCCc-EEEEEEEEecC
Confidence            999999998886 55556666643

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=96.73  E-value=0.00066  Score=75.12  Aligned_cols=79  Identities=18%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.+.|.|.+.|.|.|.|+|.|+...+..... + .....+|.|..+...|+|.|+|.|.|..|. ....+.|.|
T Consensus       336 ~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~-~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~-~~~~~~L~V  412 (527)
T 3qs9_E          336 YEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQK-G-LDNGYSISKFCNHKHQPGEYIFHAENDDAQ-FTKMFTLNI  412 (527)
T ss_dssp             ECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCC-B-CSSSSEEEEECCCTTCCSCEEEEEEETTEE-EEEEEEEC-
T ss_pred             EEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcc-c-ccCCcEEEEecCCcccCEEEEEEEEeCCCc-EEEEEEEEE
Confidence            5677899999999999999999999986655543222 1 235568999999999999999999999997 555666766


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      ..
T Consensus       413 ~~  414 (527)
T 3qs9_E          413 RR  414 (527)
T ss_dssp             -C
T ss_pred             ec
Confidence            53

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=96.73  E-value=0.00072  Score=67.41  Aligned_cols=80  Identities=20%  Similarity=0.334  Sum_probs=58.3

Q ss_pred             ccccCCCeeeeeecccCCCCCe-eeccCCcee----ecC-CC----CceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVS----IDG-SD----GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~----l~~-~~----g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|+.++|.|.+.|.|.|. |.|.++...    +.. ..    +.+.....+.|.|.++...|+|.|.|.|.|..|.
T Consensus       198 ~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~  277 (290)
T 2o26_X          198 HLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS  277 (290)
T ss_dssp             CCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred             ceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc
Confidence            3577899999999999999997 999874332    111 11    1112334568999999999999999999999997


Q ss_pred             ccccceeeeec
Q psy10163        420 PIRKEFNVIVR  430 (615)
Q Consensus       420 p~~~~~~l~V~  430 (615)
                       ....+.|.|.
T Consensus       278 -~~~~~~l~V~  287 (290)
T 2o26_X          278 -ANVTTTLKVV  287 (290)
T ss_dssp             -EEEEEEECC-
T ss_pred             -EEEEEEEEEE
Confidence             4555656553

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=96.72  E-value=0.00077  Score=66.87  Aligned_cols=80  Identities=23%  Similarity=0.255  Sum_probs=59.1

Q ss_pred             ccccCCCeeeeeecccC-CCCCeeeccCCceeecCCCC----ceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        350 VEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDG----HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g----~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+|+.++|.|.+.+ .|.|.|.|.++...+.....    .......+.|.|..+...|+|.|.|.+.|..|. ....
T Consensus       196 ~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~s  274 (289)
T 3ejj_X          196 LVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGT-RTAT  274 (289)
T ss_dssp             EECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCE-EEEE
T ss_pred             eEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCC-cccc
Confidence            34568999999999998 89999999876554432110    111223457999999999999999999999998 5555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.+.
T Consensus       275 ~~L~~~  280 (289)
T 3ejj_X          275 MNFQVV  280 (289)
T ss_dssp             EEEECC
T ss_pred             EEEEEE
Confidence            555553

>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4

Probab=96.72  E-value=0.0011  Score=57.31  Aligned_cols=84  Identities=21%  Similarity=0.281  Sum_probs=55.0

Q ss_pred             CCcccccCCCeeeeeecccC-CCCCeeeccCCc----eee-cCCCCceEEecCC-----eEEEeeccccCCceeeecCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGE----VSI-DGSDGHYKLTLDG-----VLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~----~~l-~~~~g~~~~~~~g-----sl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .....+.+|+...|.|.+.+ .|.|.|+|.|..    +-+ ...+++......+     .|.+-.++..|+|.|.|.|.+
T Consensus        21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~  100 (122)
T 1xau_A           21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNF  100 (122)
T ss_dssp             TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEE
T ss_pred             eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeC
Confidence            44567889999999999965 789999998732    111 1222111111111     577778899999999999999


Q ss_pred             CCCcccccc-eeeeecc
Q psy10163        416 GIGDPIRKE-FNVIVRG  431 (615)
Q Consensus       416 ~~G~p~~~~-~~l~V~~  431 (615)
                      ..|. .+.. ..+.|++
T Consensus       101 ~~g~-ieSHs~ti~V~~  116 (122)
T 1xau_A          101 NSQV-INSHSVTIHVRE  116 (122)
T ss_dssp             TTEE-EECCCEEEEEC-
T ss_pred             CCCc-eeeeEEEEEEEe
Confidence            8776 3322 3344544

>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A

Probab=96.72  E-value=0.00099  Score=64.06  Aligned_cols=83  Identities=17%  Similarity=0.269  Sum_probs=52.8

Q ss_pred             cccccCCCeeeeeecccC-CCCCeeeccCCc-eeecCCCCceEEecCCe---EEEeeccccCCceeeecCCCCCCccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIG-YPIPVYTWSKGE-VSIDGSDGHYKLTLDGV---LQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~-~~l~~~~g~~~~~~~gs---l~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      .+.+.+|+.+.|.|.+.| .|.|.|+|.++. ..+...........++.   +.+..+...|.|.|+|.|.|..|. .+.
T Consensus       127 ~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~-~~~  205 (226)
T 4f80_A          127 DVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLG-LEK  205 (226)
T ss_dssp             EEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTT-EEE
T ss_pred             eeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCC-eEE
Confidence            345678899999999998 599999998733 23222222223333443   334566789999999999999987 556


Q ss_pred             ceeeeeccc
Q psy10163        424 EFNVIVRGN  432 (615)
Q Consensus       424 ~~~l~V~~~  432 (615)
                      ...+.|.++
T Consensus       206 ~~~v~v~ep  214 (226)
T 4f80_A          206 TASISIADP  214 (226)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEECCC
Confidence            666666553

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=96.72  E-value=0.00083  Score=67.57  Aligned_cols=80  Identities=35%  Similarity=0.473  Sum_probs=61.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCC--CCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS--DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~--~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+...  ..+.....++.|.|..+...|+|.|.|.+.|..|........+
T Consensus       118 ~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l  197 (304)
T 2yd9_A          118 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANL  197 (304)
T ss_dssp             EEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred             EEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEE
Confidence            45678999999999999999999998765554322  2455566778999999999999999999999888633332333


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus       198 ~v  199 (304)
T 2yd9_A          198 YV  199 (304)
T ss_dssp             EE
T ss_pred             EE
Confidence            33

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}

Probab=96.71  E-value=0.00074  Score=62.85  Aligned_cols=72  Identities=24%  Similarity=0.393  Sum_probs=55.5

Q ss_pred             CcccccCCCeeeeeec-ccCCCC-CeeeccCCceeec--CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        348 PTVEAEEGNFVTLRCI-AIGYPI-PVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~-~~G~P~-P~i~w~k~~~~l~--~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+.+|+.++|.|. +.+.|. +.|.|.++...+.  ..........+++|.|.++...|+|.|.|.+.+..+.
T Consensus        16 ~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~   91 (201)
T 3s97_C           16 PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT   91 (201)
T ss_dssp             CCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred             ceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCC
Confidence            4467889999999999 899999 9999986443332  2223344446678999999999999999999886543

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=96.71  E-value=0.00053  Score=67.73  Aligned_cols=70  Identities=26%  Similarity=0.288  Sum_probs=52.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++..         .+...+.+.  .+...|+|.|.|.|.|..|. ....+.|.
T Consensus       194 ~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~---------~~~~~g~~~--~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~  261 (265)
T 2oz4_A          194 NWTWPENSQQTPMCQAWGNPLPELKCLKDGT---------FPLPIGESV--TVTRDLEGTYLCRARSTQGE-VTREVTVN  261 (265)
T ss_dssp             EEEEETTCEECCCCCCEEESCCEEEEEETTT---------EECCTTSCE--ECCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ccEEcCCCeEEEEeECccCCCCeEEEEECCc---------ccCCCCcEE--EeehhhCeEEEEEEECCCCc-EEEEEEEE
Confidence            3456789999999999999999999987432         122334443  37779999999999999987 55556665


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus       262 V~  263 (265)
T 2oz4_A          262 VL  263 (265)
T ss_dssp             EE
T ss_pred             Ee
Confidence            53

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4

Probab=96.70  E-value=0.00094  Score=62.69  Aligned_cols=70  Identities=20%  Similarity=0.401  Sum_probs=54.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceee-----------cCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-----------DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l-----------~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.|.|.++...+           ....+++.+. .++|.|.++...|+|.|.|.+.+.
T Consensus         9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~C~~~~~   87 (212)
T 1f97_A            9 SDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYTCMVSEE   87 (212)
T ss_dssp             SEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEEEEEEET
T ss_pred             CCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEEEEEEcc
Confidence            4567789999999999999999999997633221           1123444444 488999999999999999999987


Q ss_pred             CC
Q psy10163        417 IG  418 (615)
Q Consensus       417 ~G  418 (615)
                      .|
T Consensus        88 ~g   89 (212)
T 1f97_A           88 GG   89 (212)
T ss_dssp             TS
T ss_pred             CC
Confidence            66

>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}

Probab=96.70  E-value=0.00046  Score=64.98  Aligned_cols=80  Identities=19%  Similarity=0.219  Sum_probs=55.4

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCC-ceEEecCCeEEEeeccccCCceeeecCCCCCCc-ccccceeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG-HYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD-PIRKEFNVI  428 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g-~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~-p~~~~~~l~  428 (615)
                      .+.+|+.++|.|.+.+ |.|.+.|.|+...+..... .......+.|.|.++...|+|.|.|.+.|..|. .....+.|.
T Consensus        15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~   93 (196)
T 3p2t_A           15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELV   93 (196)
T ss_dssp             EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEE
T ss_pred             cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEE
Confidence            5678999999999999 7789999774432211000 000123457999999999999999999998872 344556666


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        94 V~~   96 (196)
T 3p2t_A           94 MTG   96 (196)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            644

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*

Probab=96.69  E-value=0.0013  Score=62.49  Aligned_cols=81  Identities=27%  Similarity=0.495  Sum_probs=57.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--CceEEecCCeE----EEeeccccCCceeeecCCCCCCcccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--GHYKLTLDGVL----QIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g~~~~~~~gsl----~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+....  .......++.+    .|.++...|+|.|.|.+.+..|....
T Consensus        18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~   97 (217)
T 2vr9_A           18 DLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS   97 (217)
T ss_dssp             CEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEEC
T ss_pred             ceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCcccc
Confidence            4677899999999999999999999987555443221  22333444444    56677899999999999988776333


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.+.|
T Consensus        98 ~~~~l~v  104 (217)
T 2vr9_A           98 RHASLQI  104 (217)
T ss_dssp             CCEEEEE
T ss_pred             ccceEEE
Confidence            3444444

>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*

Probab=96.68  E-value=0.0014  Score=62.02  Aligned_cols=82  Identities=21%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---C---ceeec-------CCCCceEEe---cCCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---G---EVSID-------GSDGHYKLT---LDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~---~~~l~-------~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+   +   ..++.       ...+++.+.   .+.+|.|.++...|+|.|.|.
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   88 (213)
T 3mj8_L            9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ   88 (213)
T ss_dssp             EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence            5678899999999999999999999965   1   11111       022455533   234799999999999999999


Q ss_pred             CCCCCC--cccccceeeeec
Q psy10163        413 AANGIG--DPIRKEFNVIVR  430 (615)
Q Consensus       413 a~n~~G--~p~~~~~~l~V~  430 (615)
                      +.+..+  ........|.|.
T Consensus        89 ~~~~~~~~~~~~~~~~l~V~  108 (213)
T 3mj8_L           89 SWDGTNSAWVFGSGTKVTVL  108 (213)
T ss_dssp             EEETTTTEEEEBCCEEEEEE
T ss_pred             eccCCcceeEEcCceEEEEe
Confidence            998877  223444455554

>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}

Probab=96.68  E-value=0.0017  Score=61.80  Aligned_cols=81  Identities=25%  Similarity=0.473  Sum_probs=54.7

Q ss_pred             cccCCCeeeeeecc-cCCCCCeeeccCC-ceeecCCCCc-eEEecCCe---EEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        351 EAEEGNFVTLRCIA-IGYPIPVYTWSKG-EVSIDGSDGH-YKLTLDGV---LQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       351 ~~~eg~~~tl~C~~-~G~P~P~i~w~k~-~~~l~~~~g~-~~~~~~gs---l~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+|+.++|.|.+ .|.|.|.|.|.++ ...+...... .....++.   |.|..+...|.|.|.|.+.|..|. ....
T Consensus       121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~  199 (222)
T 4i0k_A          121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQ-QDAH  199 (222)
T ss_dssp             ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTT-EEEE
T ss_pred             eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCC-CceE
Confidence            45678999999999 8999999999873 3222211111 11122332   678889999999999999999887 5666


Q ss_pred             eeeeeccc
Q psy10163        425 FNVIVRGN  432 (615)
Q Consensus       425 ~~l~V~~~  432 (615)
                      +.|.|.+.
T Consensus       200 ~~l~V~~~  207 (222)
T 4i0k_A          200 GSVTITGQ  207 (222)
T ss_dssp             EEEECCC-
T ss_pred             EEEEEeCC
Confidence            66666553

>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}

Probab=96.67  E-value=0.0021  Score=55.15  Aligned_cols=77  Identities=21%  Similarity=0.255  Sum_probs=50.3

Q ss_pred             cccCCCeeeeeecccCCCCC-----eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC--ccccc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIP-----VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG--DPIRK  423 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P-----~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G--~p~~~  423 (615)
                      .+.+|+.++|.|.+.+.|.+     .+.|.|+...+.      .......|.|..+...|+|.|.|.+.+..+  .....
T Consensus        18 ~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~------~~~~~~~l~i~~v~~~dsG~Y~C~~~~~~~~~~~~S~   91 (108)
T 4hwn_A           18 EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQ------SRGLSSEFQIPTASEDHSGSYWCEAATEDNQVWKQSP   91 (108)
T ss_dssp             SCBTTCCEEEEEEC---------CCEEEEEETTEEEE------EEESCCEEEESSCCGGGCEEEEEEEECTTSSSEEECC
T ss_pred             cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCcc------CCCcccEEEeCccCcccCeEEEEEEEeCCCceeccCC
Confidence            46689999999999877655     388877544332      123456799999999999999999988654  22345


Q ss_pred             ceeeeecccc
Q psy10163        424 EFNVIVRGNY  433 (615)
Q Consensus       424 ~~~l~V~~~~  433 (615)
                      .+.|.|.+..
T Consensus        92 ~l~L~V~g~~  101 (108)
T 4hwn_A           92 QLEIRVQGAS  101 (108)
T ss_dssp             CEEECCBC--
T ss_pred             CEEEEEEecc
Confidence            5667776643

>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}

Probab=96.66  E-value=0.0018  Score=55.18  Aligned_cols=79  Identities=22%  Similarity=0.380  Sum_probs=54.5

Q ss_pred             ccccCCCeeeeeecc-cCCCCCe----eeccCCc----eee-c-------CCCCceEEec--------CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIA-IGYPIPV----YTWSKGE----VSI-D-------GSDGHYKLTL--------DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~-~G~P~P~----i~w~k~~----~~l-~-------~~~g~~~~~~--------~gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+ .+.+.+.    |.|.+..    .++ .       ...++..+..        +.+|.|.++...
T Consensus        10 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~   89 (118)
T 3udw_C           10 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVE   89 (118)
T ss_dssp             EEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGG
T ss_pred             EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChH
Confidence            678899999999998 5666554    9997631    111 0       1145555554        568999999999


Q ss_pred             CCceeeecCCC-CCCcccccceeeee
Q psy10163        405 DAGIYVCVAAN-GIGDPIRKEFNVIV  429 (615)
Q Consensus       405 DsG~Y~C~a~n-~~G~p~~~~~~l~V  429 (615)
                      |+|.|.|.+.+ ..|. ....+.|.|
T Consensus        90 D~G~Y~C~v~~~~~~~-~~~~~~L~V  114 (118)
T 3udw_C           90 DEGNYTCLFVTFPQGS-RSVDIWLRV  114 (118)
T ss_dssp             GCEEEEEEEEEETTEE-EEEEEEEEE
T ss_pred             HCeEEEEEEEECCCCC-ccceEEEEE
Confidence            99999999877 4443 444445544

>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A

Probab=96.66  E-value=0.0011  Score=57.65  Aligned_cols=83  Identities=17%  Similarity=0.254  Sum_probs=57.8

Q ss_pred             CcccccCCCeeeeeecccC--CCCCeeeccCCceee---cC---------CCCceEEecCCeEEEeeccccCCceeeecC
Q psy10163        348 PTVEAEEGNFVTLRCIAIG--YPIPVYTWSKGEVSI---DG---------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G--~P~P~i~w~k~~~~l---~~---------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      ..+.+.+|+.++|.|...+  .+.+.|.|.++...+   ..         -.+++.+..+.+|.|.++...|+|.|.|..
T Consensus        11 ~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~v   90 (117)
T 3q0h_A           11 GNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFCIY   90 (117)
T ss_dssp             CCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEEEE
T ss_pred             CCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEEEE
Confidence            3467789999999999887  345579997643221   11         135666666779999999999999999975


Q ss_pred             C-CCCCcccccceeeeecc
Q psy10163        414 A-NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       414 ~-n~~G~p~~~~~~l~V~~  431 (615)
                      . +..|. ....+.|.|..
T Consensus        91 ~~~~~g~-~~~~~~L~V~~  108 (117)
T 3q0h_A           91 HTYPDGT-YTGRIFLEVLE  108 (117)
T ss_dssp             EEETTCC-EEEEEEEEEEC
T ss_pred             EECCCCC-eEEEEEEEEEc
Confidence            3 34454 44556666643

>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*

Probab=96.65  E-value=0.0024  Score=61.30  Aligned_cols=71  Identities=23%  Similarity=0.315  Sum_probs=53.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEe---cCCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLT---LDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++.       ...+++...   .+.+|.|.++...|+|.|.|.
T Consensus        33 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  112 (237)
T 3sob_L           33 SLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ  112 (237)
T ss_dssp             EEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEe
Confidence            36788999999999999999999999651      11111       123566554   334799999999999999999


Q ss_pred             CCCCCCc
Q psy10163        413 AANGIGD  419 (615)
Q Consensus       413 a~n~~G~  419 (615)
                      +.+..+.
T Consensus       113 ~~~~~~~  119 (237)
T 3sob_L          113 QSYTTPP  119 (237)
T ss_dssp             ECSSSSC
T ss_pred             eccCCce
Confidence            9887653

>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...

Probab=96.65  E-value=0.0031  Score=53.79  Aligned_cols=68  Identities=22%  Similarity=0.327  Sum_probs=51.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eeec-------CCCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+..      .++.       ...+++.+..   ..+|.|.++...|+|.|.|.
T Consensus        12 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   91 (109)
T 2q20_A           12 SLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQ   91 (109)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEEE
Confidence            467889999999999999988999996521      1221       1135665543   23799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        92 ~~~~   95 (109)
T 2q20_A           92 QYDN   95 (109)
T ss_dssp             ECSS
T ss_pred             EeeC
Confidence            8764

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A

Probab=96.65  E-value=0.0015  Score=61.37  Aligned_cols=81  Identities=32%  Similarity=0.576  Sum_probs=57.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC----CceEEecCCeEEEe-----eccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIV-----GLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~----g~~~~~~~gsl~I~-----~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++...+....    .......++.+.+.     ++...|+|.|.|.+.+..|.
T Consensus        18 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~   97 (212)
T 2v9r_A           18 DLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE   97 (212)
T ss_dssp             CEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEE
T ss_pred             ceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCc
Confidence            4567889999999999999999999987654443221    23344455555444     44789999999999988776


Q ss_pred             ccccceeeee
Q psy10163        420 PIRKEFNVIV  429 (615)
Q Consensus       420 p~~~~~~l~V  429 (615)
                      .....+.|.|
T Consensus        98 ~~~~~~~l~V  107 (212)
T 2v9r_A           98 AVSHDASLEV  107 (212)
T ss_dssp             EECCCEEEEE
T ss_pred             eeecceEEEE
Confidence            3344444544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=96.64  E-value=0.0013  Score=73.63  Aligned_cols=79  Identities=27%  Similarity=0.376  Sum_probs=63.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|..+.+.|.+.|.|.|.|+|.|+...|. ...++.+..++   +|.|..+.+.|+|.|+|.|.|..|. ....+
T Consensus       491 ~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~-~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~-~~~~v  568 (573)
T 3uto_A          491 GTEVGEGQSANFYCRVIASSPPVVTWHKDDRELK-QSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGT-KEEIV  568 (573)
T ss_dssp             CEEECTTSCEEEEEEEECSSCCEEEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             CcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcc-cCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCc-EEEEE
Confidence            4567789999999999999999999988665554 34566655444   6888899999999999999999997 56556


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus       569 ~l~V  572 (573)
T 3uto_A          569 FLNV  572 (573)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6655

>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}

Probab=96.64  E-value=0.0023  Score=60.40  Aligned_cols=82  Identities=17%  Similarity=0.133  Sum_probs=60.3

Q ss_pred             cccccCCCeeeeeecccC-CCCCeeeccCC-ceee--cCC----------C----CceEEecCCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIG-YPIPVYTWSKG-EVSI--DGS----------D----GHYKLTLDGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~-~~~l--~~~----------~----g~~~~~~~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+ .+.+.|.|.++ ..+.  ...          .    ++..+..+++|.|.++...|+|.|.
T Consensus         7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~   86 (193)
T 2if7_A            7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYR   86 (193)
T ss_dssp             EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEE
T ss_pred             EEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEE
Confidence            467889999999999875 56789999875 3221  111          1    3555566789999999999999999


Q ss_pred             ecCCCCCCcccccceeeeecc
Q psy10163        411 CVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       411 C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      |.+.+..+. ....+.|.|.+
T Consensus        87 C~~~~~~~~-~~~~~~L~V~~  106 (193)
T 2if7_A           87 AQISTKTSA-KLSSYTLRILR  106 (193)
T ss_dssp             EEEECSSCE-EEEEEEEEEEC
T ss_pred             EEEEecCCC-eEEEEEEEEEc
Confidence            999888775 34456666643

>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A

Probab=96.63  E-value=0.0038  Score=53.16  Aligned_cols=70  Identities=24%  Similarity=0.345  Sum_probs=52.2

Q ss_pred             CcccccCCCeeeeeecc-cCCCCCeeeccC--Cceee--c---------C-CCCceEEe-cCCeEEEeeccccCCceeee
Q psy10163        348 PTVEAEEGNFVTLRCIA-IGYPIPVYTWSK--GEVSI--D---------G-SDGHYKLT-LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~-~G~P~P~i~w~k--~~~~l--~---------~-~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      ..+.+.+|+.++|.|.. .+.+.+.|.|.+  ++.++  .         . -.+++.+. ..++|.|.++...|+|.|.|
T Consensus        11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C   90 (110)
T 2ptt_A           11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGTYYM   90 (110)
T ss_dssp             CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEEEEE
T ss_pred             CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeEEEE
Confidence            34678899999999998 788889999976  22121  0         0 11466555 56789999999999999999


Q ss_pred             cCCCCC
Q psy10163        412 VAANGI  417 (615)
Q Consensus       412 ~a~n~~  417 (615)
                      .+.+..
T Consensus        91 ~v~~~~   96 (110)
T 2ptt_A           91 RVLRET   96 (110)
T ss_dssp             EEESSS
T ss_pred             EEEcCC
Confidence            986653

>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A

Probab=96.62  E-value=0.0034  Score=53.34  Aligned_cols=68  Identities=19%  Similarity=0.325  Sum_probs=50.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++..       ..+++.+...   .+|.|.++...|+|.|.|.
T Consensus        10 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   89 (107)
T 1i8k_A           10 SLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCL   89 (107)
T ss_dssp             EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEE
Confidence            46778999999999999988899999542      122211       1356655432   2799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        90 ~~~~   93 (107)
T 1i8k_A           90 QSFN   93 (107)
T ss_dssp             ECSS
T ss_pred             EeeC
Confidence            8764

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=96.62  E-value=0.0012  Score=66.57  Aligned_cols=72  Identities=17%  Similarity=0.155  Sum_probs=55.9

Q ss_pred             CCcccccCCCeeeeeecccCCC-CCeeeccCCceee--cC-CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYP-IPVYTWSKGEVSI--DG-SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~~l--~~-~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +..+.+.+|+.++|.|.+.+.| .|.|.|.|+...+  .. ...++ ...+++|.|.++...|+|.|.|.+.|..|.
T Consensus        12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~   87 (315)
T 1itb_B           12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRI-HQHKEKLWFVPAKVEDSGHYYCVVRNSSYC   87 (315)
T ss_dssp             CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSS-EECSSBEECTTCCGGGCSCCEECCCSSSCC
T ss_pred             ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcE-eccCCeEEECCCChhhCEEEEEEEeCCceE
Confidence            4567888999999999999998 8999998754221  11 12333 344568999999999999999999988765

>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...

Probab=96.61  E-value=0.0034  Score=54.88  Aligned_cols=68  Identities=24%  Similarity=0.370  Sum_probs=51.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++.       ...+++.+..   ..+|.|.++...|+|.|.|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   89 (120)
T 1mqk_L           10 SLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQ   89 (120)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEEE
Confidence            46788999999999999998899999652      12221       1135665542   23799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        90 ~~~~   93 (120)
T 1mqk_L           90 HHYG   93 (120)
T ss_dssp             ECSS
T ss_pred             EEeC
Confidence            8875

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=96.61  E-value=0.0013  Score=71.77  Aligned_cols=82  Identities=22%  Similarity=0.283  Sum_probs=64.3

Q ss_pred             cccccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEecC-------CeEEEeeccccCCceeeecCCCCCCcc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLD-------GVLQIVGLVRQDAGIYVCVAANGIGDP  420 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~~~-------gsl~I~~~~~~DsG~Y~C~a~n~~G~p  420 (615)
                      .+.+.+|+.++|.|.+.|.|.|. |.|.++...+.....++.....       ..|.|..+...|+|.|.|.|.|..|. 
T Consensus       322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-  400 (524)
T 2ec8_A          322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVN-  400 (524)
T ss_dssp             EEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCE-
T ss_pred             eEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCce-
Confidence            45678899999999999999999 9998866555433335554433       37999999999999999999999997 


Q ss_pred             cccceeeeecc
Q psy10163        421 IRKEFNVIVRG  431 (615)
Q Consensus       421 ~~~~~~l~V~~  431 (615)
                      ....+.|.|..
T Consensus       401 ~~~~~~l~V~~  411 (524)
T 2ec8_A          401 AAIAFNVYVNT  411 (524)
T ss_dssp             EEEEEEEEECE
T ss_pred             EEEEEEEEEec
Confidence            55666666643

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=96.60  E-value=0.00043  Score=69.76  Aligned_cols=77  Identities=23%  Similarity=0.345  Sum_probs=55.4

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCC-eEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDG-VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~g-sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ..+.+|+.++|.|.+.|.|.| .|.|.|+...+.  .+  .+..++ .|.|..+...|+|.|.|.|.|..|. ....+.|
T Consensus       222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~--~~--~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~-~~~~~~l  296 (308)
T 4fom_A          222 NWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWP--DG--LLASDNTLHFVHPLTFNYSGVYICKVTNSLGQ-RSDQKVI  296 (308)
T ss_dssp             CEETTCCSCEEECCEEEESCEEEEECCBSSSCCC--SS--CBCSTTEEECCSCCCSCCCSEEEEEEEETTEE-EEEEEEC
T ss_pred             eeeeccccEEEEEEEecCCCCcEEEEEECCeECC--Cc--EEEcCCeEEEECCCChhhCEEEEEEEEeCCCc-EEEEEEE
Confidence            345577889999999999999 699987433221  11  122233 3456678899999999999999997 5666677


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .|..
T Consensus       297 ~V~~  300 (308)
T 4fom_A          297 YISD  300 (308)
T ss_dssp             CEEC
T ss_pred             EEEc
Confidence            6654

>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}

Probab=96.60  E-value=0.0025  Score=62.22  Aligned_cols=72  Identities=21%  Similarity=0.349  Sum_probs=53.8

Q ss_pred             CcccccCCCeeeeeecccCCC-----CCeeeccCC---ce---ee-------cCCCCceEEecCC---eEEEeeccccCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYP-----IPVYTWSKG---EV---SI-------DGSDGHYKLTLDG---VLQIVGLVRQDA  406 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P-----~P~i~w~k~---~~---~l-------~~~~g~~~~~~~g---sl~I~~~~~~Ds  406 (615)
                      ..+.+.+|+.++|.|.+.+.|     .|.|.|.+.   ..   ++       ....+++.+...+   +|.|.++...|+
T Consensus        46 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~  125 (254)
T 2c1o_A           46 LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDL  125 (254)
T ss_dssp             SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             ceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccC
Confidence            346788999999999999998     489999641   11   11       1123566655433   799999999999


Q ss_pred             ceeeecCCCCCCc
Q psy10163        407 GIYVCVAANGIGD  419 (615)
Q Consensus       407 G~Y~C~a~n~~G~  419 (615)
                      |.|.|.+.+..+.
T Consensus       126 G~Y~C~a~n~~~~  138 (254)
T 2c1o_A          126 GIYYCVQGSHFPP  138 (254)
T ss_dssp             SEEEEEECSSSSC
T ss_pred             EEEEEEEEcCcce
Confidence            9999999987654

>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*

Probab=96.59  E-value=0.0012  Score=63.80  Aligned_cols=82  Identities=13%  Similarity=0.152  Sum_probs=56.6

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC----cccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG----DPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G----~p~~~~~  425 (615)
                      ..+.+|+.++|.|.+.+.|.|.+.|.|+...+..  ........+.|.|.++...|+|.|.|.|.+...    ......+
T Consensus       115 ~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~  192 (218)
T 1uct_A          115 LVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP--QHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNAL  192 (218)
T ss_dssp             SEECTTCCCEEEEECSSSCCSEEEEEETTCSSCC--SEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCE
T ss_pred             CccCCCCCEEEEEeCCCCCCCEEEEEECCCcccc--cccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcE
Confidence            3567899999999778888899999875433321  122223456899999999999999999987532    2234556


Q ss_pred             eeeecccc
Q psy10163        426 NVIVRGNY  433 (615)
Q Consensus       426 ~l~V~~~~  433 (615)
                      .|.|.+..
T Consensus       193 ~l~V~g~~  200 (218)
T 1uct_A          193 ELVVTDSI  200 (218)
T ss_dssp             EEEEC---
T ss_pred             EEEEecCC
Confidence            77777643

>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D

Probab=96.59  E-value=0.0029  Score=62.09  Aligned_cols=83  Identities=18%  Similarity=0.226  Sum_probs=57.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---Cce---eec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---GEV---SID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~~~---~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+   +..   ++.       ...+++.....+   +|.|.++...|+|.|.|.
T Consensus       147 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  226 (256)
T 3umt_A          147 SLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCL  226 (256)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEE
T ss_pred             eEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEE
Confidence            3567899999999999999999999965   111   111       112455444332   599999999999999999


Q ss_pred             CCCCCCcccccceeeeecc
Q psy10163        413 AANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V~~  431 (615)
                      +.+....-......|.|.+
T Consensus       227 ~~~~~~~~fg~gt~L~V~~  245 (256)
T 3umt_A          227 QYASSPPTFGGGTKLEIKR  245 (256)
T ss_dssp             ECSSSSCEECCCEEEEEC-
T ss_pred             EeeCCCcEECCCEEEEEEC
Confidence            9886544333445555544

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=96.59  E-value=0.0013  Score=65.97  Aligned_cols=70  Identities=24%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEEe-cCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.+. |.|.|.|.++...+.. ..++.+. ....|.|.++...|+|.|.|.+.+..|.
T Consensus        15 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~   86 (317)
T 2y25_A           15 SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV-DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK   86 (317)
T ss_dssp             EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECC-SCC-----CCEEEEETTCCSTTCSCEEEEEESSSCE
T ss_pred             eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCC-CCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCc
Confidence            4678899999999999988 8899999886655542 2333332 2348999999999999999999888775

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=96.59  E-value=0.0015  Score=67.65  Aligned_cols=81  Identities=19%  Similarity=0.103  Sum_probs=59.8

Q ss_pred             cccccCCCeeeeeecccC-----CCCCeeeccCCceeecC-------CCCceEEe-----------c--CCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIG-----YPIPVYTWSKGEVSIDG-------SDGHYKLT-----------L--DGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G-----~P~P~i~w~k~~~~l~~-------~~g~~~~~-----------~--~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+     +|.|.|+|.++...+..       ..+++.+.           .  ...|.|.++..
T Consensus       185 ~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~  264 (363)
T 1wio_A          185 IVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALP  264 (363)
T ss_dssp             EEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCG
T ss_pred             ceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCc
Confidence            345678999999998888     89999999875433332       13444432           2  33899999999


Q ss_pred             cCCceeeecCCCC--CCcccccceeeeec
Q psy10163        404 QDAGIYVCVAANG--IGDPIRKEFNVIVR  430 (615)
Q Consensus       404 ~DsG~Y~C~a~n~--~G~p~~~~~~l~V~  430 (615)
                      .|+|.|.|.+.|.  .|. ....+.|.|.
T Consensus       265 ~d~G~Y~C~a~n~~~~g~-~~~~~~l~V~  292 (363)
T 1wio_A          265 QYAGSGNLTLALEAKTGK-LHQEVNLVVM  292 (363)
T ss_dssp             GGCEEEEEEECBTTTTCC-EEEEEEEEEE
T ss_pred             CcCcEEEEEEEEhhhcCe-EEEEEeEEEE
Confidence            9999999999999  885 5556555553

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=96.58  E-value=0.0013  Score=67.16  Aligned_cols=71  Identities=28%  Similarity=0.464  Sum_probs=56.1

Q ss_pred             CcccccCCCeeeeeeccc-------CCCCCeeeccCCcee--ecCC-CCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAI-------GYPIPVYTWSKGEVS--IDGS-DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-------G~P~P~i~w~k~~~~--l~~~-~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      ..+.+.+|+.++|.|.+.       +.|.|.|.|.++...  +... ..+. ...+++|.|.++...|+|.|.|.+.+..
T Consensus        26 ~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~n~~  104 (339)
T 3o4o_C           26 KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRM-WAQDGALWLLPALQEDSGTYVCTTRNAS  104 (339)
T ss_dssp             CCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCE-EEETTEEEESSBCTTCCEEEECCEEETT
T ss_pred             eEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccE-EeeCCeEEECCCCcccCEEEEEEEECCc
Confidence            346788999999999998       999999999875443  2222 2333 3567899999999999999999999877


Q ss_pred             Cc
Q psy10163        418 GD  419 (615)
Q Consensus       418 G~  419 (615)
                      |.
T Consensus       105 g~  106 (339)
T 3o4o_C          105 YC  106 (339)
T ss_dssp             EE
T ss_pred             ce
Confidence            64

>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=96.57  E-value=0.0013  Score=61.63  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC--cccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG--DPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G--~p~~~~~~l  427 (615)
                      ..+.+|+.++|.|.+.+. .|.+.|.|+...+..  ........+.|.|.++...|+|.|.|.+.|...  ......+.|
T Consensus       108 ~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~--~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l  184 (188)
T 1oll_A          108 PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV--QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL  184 (188)
T ss_dssp             SEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE--EEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEE
T ss_pred             CccccCCEEEEEEEcCCC-CCEEEEEECCccccc--cccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEE
Confidence            346789999999998775 578999764322211  011122346899999999999999999987642  223344555


Q ss_pred             eec
Q psy10163        428 IVR  430 (615)
Q Consensus       428 ~V~  430 (615)
                      .|.
T Consensus       185 ~V~  187 (188)
T 1oll_A          185 LVT  187 (188)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            553

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=96.56  E-value=0.00068  Score=78.36  Aligned_cols=71  Identities=24%  Similarity=0.520  Sum_probs=58.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecCCeEEEeeccccC------CceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQD------AGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~gsl~I~~~~~~D------sG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.| +...+....+...+..+|+|.|..+...|      +|.|.|.|.|..|.
T Consensus        48 ~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~Y~C~a~n~~G~  125 (816)
T 3dmk_A           48 RIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGS  125 (816)
T ss_dssp             EEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEE
T ss_pred             eEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceEEEEEEecCcce
Confidence            3567788999999999999999999987 55555444455667788999999887776      89999999999986

>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}

Probab=96.55  E-value=0.00096  Score=62.69  Aligned_cols=67  Identities=15%  Similarity=0.196  Sum_probs=48.6

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCce---EEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY---KLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~---~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+|+.++|.|.+.+. .+.+.|.|+...+.......   .....+.|.|.++...|+|.|.|.|.|..+
T Consensus       110 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~  179 (196)
T 3p2t_A          110 LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS  179 (196)
T ss_dssp             EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred             eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence            45689999999999885 46889987543322111111   123456799999999999999999999876

>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=96.55  E-value=0.0027  Score=61.30  Aligned_cols=82  Identities=17%  Similarity=0.202  Sum_probs=57.7

Q ss_pred             cccccCCCeeeeeecccCCC----CCeeeccCC---c---eeec-------CCCCceEEecCC---eEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP----IPVYTWSKG---E---VSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~---~---~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.|    .|.|.|.+.   .   .++.       ...+++.+...+   +|.|.++...|+|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~   89 (240)
T 1moe_A           10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT   89 (240)
T ss_dssp             EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred             eEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEE
Confidence            35678999999999999998    889999652   1   1111       123566654433   79999999999999


Q ss_pred             eeecCCCCCCcccccceeeeec
Q psy10163        409 YVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       409 Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      |.|.+.+..+........|.|.
T Consensus        90 Y~C~~~n~~~~~~~~~~~l~V~  111 (240)
T 1moe_A           90 YYCQQTNEDPYTFGGGTKLEIK  111 (240)
T ss_dssp             EEEEECSSSSCCBCCCEEEEEC
T ss_pred             EEEEEccCCceeecCCEEEEEe
Confidence            9999998765423333444443

>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1

Probab=96.53  E-value=0.0036  Score=60.86  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=51.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC--C-ce---eec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK--G-EV---SID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k--~-~~---~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+  . ..   ++.       ...+++.+...   .+|.|.++...|+|.|.|.
T Consensus       144 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  223 (247)
T 2ghw_B          144 TLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQ  223 (247)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEE
T ss_pred             EEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEE
Confidence            3567899999999999999999999976  2 11   110       11345554432   3699999999999999999


Q ss_pred             CCCCCC
Q psy10163        413 AANGIG  418 (615)
Q Consensus       413 a~n~~G  418 (615)
                      +.+...
T Consensus       224 a~~~~~  229 (247)
T 2ghw_B          224 QRSNWP  229 (247)
T ss_dssp             ECSSSS
T ss_pred             EccCCC
Confidence            987543

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=96.51  E-value=0.002  Score=65.68  Aligned_cols=80  Identities=16%  Similarity=0.222  Sum_probs=61.9

Q ss_pred             cccCCCeeeeeec-----ccCCCCCeeeccCCceeecCCCCceEEecC-CeEEEeeccccCCceeeecCCCCCCc---cc
Q psy10163        351 EAEEGNFVTLRCI-----AIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-GVLQIVGLVRQDAGIYVCVAANGIGD---PI  421 (615)
Q Consensus       351 ~~~eg~~~tl~C~-----~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~-gsl~I~~~~~~DsG~Y~C~a~n~~G~---p~  421 (615)
                      .+.+|+.++|.|.     +.|.|.|.|.|.++...+.....++.+..+ +.|.|..+...|+|.|.|.+.|..|.   ..
T Consensus       131 ~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~  210 (339)
T 3o4o_C          131 ILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNI  210 (339)
T ss_dssp             EEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEE
T ss_pred             EEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEE
Confidence            5678999999999     889999999998876666555566666654 48999999999999999999988764   12


Q ss_pred             ccceeeeec
Q psy10163        422 RKEFNVIVR  430 (615)
Q Consensus       422 ~~~~~l~V~  430 (615)
                      ...+.|.|.
T Consensus       211 ~~~~~l~V~  219 (339)
T 3o4o_C          211 TRSIELRIK  219 (339)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            334445553

>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L

Probab=96.51  E-value=0.0031  Score=61.74  Aligned_cols=71  Identities=18%  Similarity=0.331  Sum_probs=53.1

Q ss_pred             cccccCCCeeeeeecccCCC-----CCeeeccCCc------eee-------cCCCCceEEecCC---eEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-----IPVYTWSKGE------VSI-------DGSDGHYKLTLDG---VLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-----~P~i~w~k~~------~~l-------~~~~g~~~~~~~g---sl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|     .|.|.|.+..      .++       ....+++.+...+   +|.|.++...|+|
T Consensus        43 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G  122 (252)
T 3bkj_L           43 SLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLG  122 (252)
T ss_dssp             EEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             eEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCE
Confidence            45678999999999999998     6899996521      111       1113566555433   7999999999999


Q ss_pred             eeeecCCCCCCc
Q psy10163        408 IYVCVAANGIGD  419 (615)
Q Consensus       408 ~Y~C~a~n~~G~  419 (615)
                      .|.|.+.+..+.
T Consensus       123 ~Y~C~~~~~~~~  134 (252)
T 3bkj_L          123 VYYCFQASLVPL  134 (252)
T ss_dssp             EEEEEECSBSSC
T ss_pred             EEEEEEEcCCcc
Confidence            999999887553

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*

Probab=96.50  E-value=0.0016  Score=62.23  Aligned_cols=76  Identities=14%  Similarity=0.200  Sum_probs=57.2

Q ss_pred             ccccCCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.+. |.|.|.|.++...+.      .....+.|.|.++...|+|.|.|.+.|..+......+.|.
T Consensus        98 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~  171 (204)
T 3sgj_C           98 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK------YFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQIT  171 (204)
T ss_dssp             SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE------EEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee------cccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEE
Confidence            456689999999999665 678999987544332      1234568999999999999999999996554456667777


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus       172 V~~  174 (204)
T 3sgj_C          172 ITQ  174 (204)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            754

>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L

Probab=96.50  E-value=0.0035  Score=62.48  Aligned_cols=71  Identities=23%  Similarity=0.327  Sum_probs=54.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eeec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+..      .++.       ...+++.+...+   +|.|.++...|+|.|.|.
T Consensus        21 ~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~  100 (276)
T 3auv_A           21 SLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ  100 (276)
T ss_dssp             EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEE
Confidence            456789999999999999999999996521      2221       123566655433   799999999999999999


Q ss_pred             CCCCCCc
Q psy10163        413 AANGIGD  419 (615)
Q Consensus       413 a~n~~G~  419 (615)
                      +.+..+.
T Consensus       101 ~~n~~~~  107 (276)
T 3auv_A          101 QHYTTPP  107 (276)
T ss_dssp             ECSSSSC
T ss_pred             EecCCcc
Confidence            9987553

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=96.48  E-value=0.0023  Score=65.44  Aligned_cols=71  Identities=18%  Similarity=0.236  Sum_probs=53.9

Q ss_pred             cccccCCCeeeeeecccCCC---CC-eeeccCCceeecCCCCceEEe-------cCCeEEEeeccccCCc-eeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP---IP-VYTWSKGEVSIDGSDGHYKLT-------LDGVLQIVGLVRQDAG-IYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P---~P-~i~w~k~~~~l~~~~g~~~~~-------~~gsl~I~~~~~~DsG-~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+.|.|   .| .|.|.++...+..........       ..+.|.|..+...|+| .|.|.|.|.
T Consensus       237 ~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~  316 (329)
T 3oq3_B          237 KINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNY  316 (329)
T ss_dssp             EEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECS
T ss_pred             eeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEec
Confidence            35677899999999999998   78 889988544322112221111       3467999999999999 999999999


Q ss_pred             CCc
Q psy10163        417 IGD  419 (615)
Q Consensus       417 ~G~  419 (615)
                      .|.
T Consensus       317 ~G~  319 (329)
T 3oq3_B          317 YFD  319 (329)
T ss_dssp             SCE
T ss_pred             CCc
Confidence            987

>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*

Probab=96.47  E-value=0.0037  Score=60.95  Aligned_cols=82  Identities=20%  Similarity=0.211  Sum_probs=57.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+|.|.|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   89 (242)
T 2znx_A           10 TLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ   89 (242)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence            35678999999999999999999999652      11221       12356665432   3799999999999999999


Q ss_pred             CCCCCCcccccceeeeec
Q psy10163        413 AANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V~  430 (615)
                      +.+..+........|.|.
T Consensus        90 ~~n~~~~~~~~~~~L~V~  107 (242)
T 2znx_A           90 QSNSXPYTFGGGTKLEIT  107 (242)
T ss_dssp             ECSSSSCEECCCEEEEEC
T ss_pred             EecCCceEECCCEEEEEc
Confidence            988754322233344443

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=96.46  E-value=0.0023  Score=66.67  Aligned_cols=80  Identities=29%  Similarity=0.492  Sum_probs=61.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+... ........+.|.|..+...|+|.|.|.+.|..|. ....+.|.|
T Consensus       232 ~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V  309 (404)
T 3p3y_A          232 QMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD-KAKFENFNKALRITNVSEEDSGEYFCLASNKMGS-IRHTISVRV  309 (404)
T ss_dssp             EEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTT-TEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred             ceEecCCCEEEEEEECCCCCCcEEEEECCEECCCC-cccccccCceEEEccCCHhHCEEEEEEEEeCCCc-EEEEEEEEE
Confidence            45778999999999999999999998755444322 2233344678999999999999999999999887 555566666


Q ss_pred             cc
Q psy10163        430 RG  431 (615)
Q Consensus       430 ~~  431 (615)
                      ..
T Consensus       310 ~~  311 (404)
T 3p3y_A          310 KA  311 (404)
T ss_dssp             EE
T ss_pred             eC
Confidence            43

>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}

Probab=96.45  E-value=0.0018  Score=60.58  Aligned_cols=71  Identities=18%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC---CceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD---GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~---g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.++..+.+.|.+.|.|.|.|+|.++...+....   ..........|.|..+...|.|.|+|.|.|..|.
T Consensus       127 ~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~  200 (218)
T 4frw_A          127 ALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLL  200 (218)
T ss_dssp             CEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCS
T ss_pred             eeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCC
Confidence            3456678889999999999999999986432221110   0000112236889999999999999999999886

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=96.45  E-value=0.0013  Score=65.93  Aligned_cols=79  Identities=37%  Similarity=0.539  Sum_probs=60.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe---cCCeEEEee-ccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---LDGVLQIVG-LVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~---~~gsl~I~~-~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+. ..+++.+.   ...+|.|.. +...|.|.|.|.|.|..|. ....+
T Consensus       114 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~-~~~~~  191 (305)
T 2nzi_A          114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGI-DQKTV  191 (305)
T ss_dssp             EEEETTCCEEEEEEEEEESCCEEEEEESSSBCC-SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEE-EEEEE
T ss_pred             EEecCCCEEEEEEEECCCCCCEEEEEECCEECC-CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCc-eeeEE
Confidence            456789999999999999999999988655543 23444443   234788888 9999999999999999987 45555


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus       192 ~l~v~  196 (305)
T 2nzi_A          192 ELDVA  196 (305)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...

Probab=96.45  E-value=0.0027  Score=60.14  Aligned_cols=71  Identities=24%  Similarity=0.368  Sum_probs=52.5

Q ss_pred             cccccCCCeeeeeecccCCC---CCeeeccCC---cee---e-------cCCCCceEEecCC---eEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP---IPVYTWSKG---EVS---I-------DGSDGHYKLTLDG---VLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P---~P~i~w~k~---~~~---l-------~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|.+.+.|   .|.|.|.+.   ..+   +       ....+++.+...+   +|.|.++...|+|.|
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y   88 (212)
T 1q0x_L            9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY   88 (212)
T ss_dssp             EEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred             eEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEE
Confidence            35677899999999999988   489999652   111   1       0123566554333   799999999999999


Q ss_pred             eecCCCCCCc
Q psy10163        410 VCVAANGIGD  419 (615)
Q Consensus       410 ~C~a~n~~G~  419 (615)
                      .|.+.+..+.
T Consensus        89 ~C~~~~~~~~   98 (212)
T 1q0x_L           89 FCALWSNNKL   98 (212)
T ss_dssp             EEEEECSSCE
T ss_pred             EEEEecCchh
Confidence            9999887654

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=96.44  E-value=0.00053  Score=70.37  Aligned_cols=84  Identities=20%  Similarity=0.242  Sum_probs=35.5

Q ss_pred             cccCCCeeeeeeccc----CCCCCeeeccCCceeecCCCCceEE------------ecCCeEEEeeccccCC-ceeeecC
Q psy10163        351 EAEEGNFVTLRCIAI----GYPIPVYTWSKGEVSIDGSDGHYKL------------TLDGVLQIVGLVRQDA-GIYVCVA  413 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~----G~P~P~i~w~k~~~~l~~~~g~~~~------------~~~gsl~I~~~~~~Ds-G~Y~C~a  413 (615)
                      .+.+|+.++|.|.+.    |+|.|.|.|.++...+....+++.+            .....|.|..+...|+ |.|.|.|
T Consensus       237 ~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a  316 (349)
T 4dep_C          237 EKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHA  316 (349)
T ss_dssp             --------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEE
T ss_pred             EEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEE
Confidence            567899999999999    6899999998755444331222211            1123489999999999 9999999


Q ss_pred             CCCCCcccccceeeeeccccee
Q psy10163        414 ANGIGDPIRKEFNVIVRGNYEQ  435 (615)
Q Consensus       414 ~n~~G~p~~~~~~l~V~~~~~~  435 (615)
                      .|..|. ....+.|.|....+.
T Consensus       317 ~N~~G~-~~~~~~l~v~~~~p~  337 (349)
T 4dep_C          317 RSAKGE-VAKAAKVKQKVPAPR  337 (349)
T ss_dssp             ECSSCE-EEEECC---------
T ss_pred             EcCCCc-EEEEEEEeeecCCCC
Confidence            999997 555666666543333

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=96.43  E-value=0.0034  Score=62.15  Aligned_cols=70  Identities=31%  Similarity=0.452  Sum_probs=54.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDP  420 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p  420 (615)
                      .+.+.+|+.++|.|.+.|.|. .|.|.+ +...+. ...++.+..++   .|.|.++...|+|.|.|.+.+..|..
T Consensus        13 ~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~   86 (291)
T 2wim_A           13 KVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKII-STQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT   86 (291)
T ss_dssp             EEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCC-CBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCE
T ss_pred             ceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCcc-CCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCce
Confidence            456789999999999999985 899987 333332 33456555554   79999999999999999999887763

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X

Probab=96.42  E-value=0.0023  Score=59.90  Aligned_cols=81  Identities=26%  Similarity=0.376  Sum_probs=58.4

Q ss_pred             cccccCCCeeeeeecccCCC----CCeeeccCCc--------eee--------c----CCCCceEEec------CCeEEE
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP----IPVYTWSKGE--------VSI--------D----GSDGHYKLTL------DGVLQI  398 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~~--------~~l--------~----~~~g~~~~~~------~gsl~I  398 (615)
                      .+.+.+|+.++|.|.+.+.|    .+.|.|.+..        .++        .    .-.++..+..      +.+|.|
T Consensus         9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i   88 (214)
T 3jz7_A            9 RIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINV   88 (214)
T ss_dssp             EEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEE
T ss_pred             eEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEE
Confidence            46788999999999999988    5799997621        111        1    0134555543      467999


Q ss_pred             eeccccCCceeeecCCCCCCcccccceeeeec
Q psy10163        399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       399 ~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      .++...|+|.|.|.+.+..|. ....+.|.|.
T Consensus        89 ~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~  119 (214)
T 3jz7_A           89 TNLQLSDIGTYQCKVKKAPGV-ANKKFLLTVL  119 (214)
T ss_dssp             CSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred             ccCChhhCeEEEEEEEeCCCc-cccEEEEEEE
Confidence            999999999999999988775 3445555553

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G

Probab=96.42  E-value=0.0015  Score=61.15  Aligned_cols=70  Identities=23%  Similarity=0.452  Sum_probs=53.4

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceee-----------cCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI-----------DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l-----------~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.|.|.++...+           ....+++.+. ..+|.|.++...|+|.|.|.+.+.
T Consensus        12 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~   90 (209)
T 1nbq_A           12 PEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGTYTCMVSEE   90 (209)
T ss_dssp             SBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSEEEEEEEET
T ss_pred             CceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcEEEEEEecC
Confidence            3456788999999999999999999997633221           1123444444 388999999999999999999887


Q ss_pred             CC
Q psy10163        417 IG  418 (615)
Q Consensus       417 ~G  418 (615)
                      .|
T Consensus        91 ~g   92 (209)
T 1nbq_A           91 GG   92 (209)
T ss_dssp             TS
T ss_pred             CC
Confidence            65

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=96.41  E-value=0.0022  Score=68.71  Aligned_cols=70  Identities=17%  Similarity=0.209  Sum_probs=50.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEE--ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL--TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~--~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.+....+... ..+..  ....+|.|.++...|+|.|+|.|.|..|.
T Consensus        57 ~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~-~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~  128 (423)
T 3qs7_E           57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQ-PHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATN  128 (423)
T ss_dssp             EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCC-CBC-----CEEEEEESSCCSSSCSEEEEEEEC--CE
T ss_pred             cEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCcc-ceeccccceEEEEEEeecCcccCEEEEEEEEcCCCc
Confidence            567889999999999999999999997644333211 00000  01125899999999999999999999886

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=96.41  E-value=0.00092  Score=69.20  Aligned_cols=80  Identities=19%  Similarity=0.185  Sum_probs=59.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCc-eeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG-IYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG-~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+............++|.|..+...|+| .|.|.+.+..|. ....+.+
T Consensus       167 ~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~-~~~~~~l  245 (347)
T 2ifg_A          167 NASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGR-AEVSVQV  245 (347)
T ss_dssp             SSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEE-CCEEECC
T ss_pred             ceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCC-EEEEEEE
Confidence            35677899999999999999999999764422211111222345568999999999999 999999999886 4545555


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus       246 ~V  247 (347)
T 2ifg_A          246 NV  247 (347)
T ss_dssp             CC
T ss_pred             EE
Confidence            55

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...

Probab=96.39  E-value=0.0019  Score=59.80  Aligned_cols=70  Identities=19%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCce--eec-----------CCCCceEEe----c--CCeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV--SID-----------GSDGHYKLT----L--DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~--~l~-----------~~~g~~~~~----~--~gsl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.++..  ++.           ...+++.+.    .  ..+|.|.++...|+|.|
T Consensus         4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y   83 (184)
T 2ny1_B            4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY   83 (184)
T ss_dssp             EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred             cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence            4567899999999999999999999987532  221           012334333    2  23599999999999999


Q ss_pred             eecCCCCCC
Q psy10163        410 VCVAANGIG  418 (615)
Q Consensus       410 ~C~a~n~~G  418 (615)
                      .|.+.+..+
T Consensus        84 ~C~~~~~~~   92 (184)
T 2ny1_B           84 ICEVEDQKE   92 (184)
T ss_dssp             EEEETTEEE
T ss_pred             EEEEEcCCC
Confidence            999988754

>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*

Probab=96.39  E-value=0.0021  Score=60.32  Aligned_cols=67  Identities=12%  Similarity=0.306  Sum_probs=46.7

Q ss_pred             cCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecC-CeE---EEeeccccCCceeeecCCCCCCc
Q psy10163        353 EEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLD-GVL---QIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       353 ~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~-gsl---~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+|+.++|.|.+. |.|.|.|+|.++...+.....+.....+ +.+   .+..+...|.|.|.|.|.|..|.
T Consensus       119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~  190 (201)
T 1dr9_A          119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR  190 (201)
T ss_dssp             SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred             CCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence            4578899999995 9999999998765555432223333333 222   23445668999999999998886

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=96.38  E-value=0.002  Score=65.53  Aligned_cols=79  Identities=29%  Similarity=0.492  Sum_probs=58.3

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCC--c-eEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG--H-YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g--~-~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+.....  . .......+|.|..+...|+|.|.|.+.|..|. ....+.
T Consensus       133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~  211 (334)
T 1ry7_B          133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYT  211 (334)
T ss_dssp             EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEE-EEEEEE
T ss_pred             EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCC-EEEEEE
Confidence            4677899999999999999999999876544432211  1 11123457999999999999999999998876 444455


Q ss_pred             eee
Q psy10163        427 VIV  429 (615)
Q Consensus       427 l~V  429 (615)
                      |.|
T Consensus       212 l~V  214 (334)
T 1ry7_B          212 LDV  214 (334)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            555

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A

Probab=96.37  E-value=0.0018  Score=61.48  Aligned_cols=78  Identities=13%  Similarity=0.236  Sum_probs=50.7

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCC-ceeecCCCCc--eEEecCCeEE---EeeccccCCceeeecCCCCCCcccccc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKG-EVSIDGSDGH--YKLTLDGVLQ---IVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~-~~~l~~~~g~--~~~~~~gsl~---I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+|+.++|.|.+.|.|.|.|.|.++ ...+.. ...  .....++.+.   +..+...|.|.|.|.+.|..|. ....
T Consensus       127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~-~~~~  204 (222)
T 3sbw_C          127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSG-KTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPE-ENHT  204 (222)
T ss_dssp             EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECC-EEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTT-EEEE
T ss_pred             eecCCCcEEEEEEecCCCCCeEEEEECCCceecC-ccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccc-eeeE
Confidence            456788999999999999999999874 333321 111  1112223222   2245678999999999999887 5555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus       205 ~~l~v~  210 (222)
T 3sbw_C          205 AELVIP  210 (222)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            555554

>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}

Probab=96.36  E-value=0.0024  Score=59.47  Aligned_cols=65  Identities=15%  Similarity=0.140  Sum_probs=48.4

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+|+.++|.|.+.+.| +.+.|.|+...+..  ........+.|.|.++...|+|.|.|.|.|..+
T Consensus       104 ~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~--~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~  168 (184)
T 2gi7_A          104 AVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPY--KNPERWYRASFPIITVTAAHSGTYRCYSFSSRD  168 (184)
T ss_dssp             SSCCTTCEEEEEECSSCC-CEEEEEECCCCTTS--CCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred             eecCCCcEEEEEEcCCCC-cEEEEEECCCcCcc--eecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence            456899999999988776 68999775433321  111233456789999999999999999998754

>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A

Probab=96.34  E-value=0.0032  Score=55.95  Aligned_cols=82  Identities=18%  Similarity=0.201  Sum_probs=57.8

Q ss_pred             cccccCCCeeeeeecccCCCC---CeeeccCCce---ee--c-C----------CCCceEEecC------CeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI---PVYTWSKGEV---SI--D-G----------SDGHYKLTLD------GVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~---P~i~w~k~~~---~l--~-~----------~~g~~~~~~~------gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.+.   +.|.|.+...   ++  . .          -.+++.+..+      .+|.|.++..
T Consensus        15 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~   94 (139)
T 1pko_A           15 PIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRF   94 (139)
T ss_dssp             CEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCG
T ss_pred             CEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCH
Confidence            356788999999999887653   7899976431   11  1 0          1256655432      4799999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeecc
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.|.|.+.+..+. ....+.|.|.+
T Consensus        95 ~D~G~Y~C~v~~~~~~-~~~~~~L~V~~  121 (139)
T 1pko_A           95 SDEGGYTCFFRDHSYQ-EEAAVELKVED  121 (139)
T ss_dssp             GGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred             HHCEEEEEEEEcCCCc-eEEEEEEEEec
Confidence            9999999999887764 45556676654

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3

Probab=96.34  E-value=0.0014  Score=61.11  Aligned_cols=64  Identities=13%  Similarity=0.021  Sum_probs=46.8

Q ss_pred             CeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        356 NFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       356 ~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ..++|.|.+.|.|.|.|.|.++...+..         ...++|..+...|+|.|.|.|.|..|. ......|.|
T Consensus       111 ~~v~L~C~~~g~p~p~i~W~~~g~~l~~---------~~~~~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~~  174 (176)
T 1hng_A          111 SNATLTCEVLEGTDVELKLYQGKEHLRS---------LRQKTMSYQWTNLRAPFKCKAVNRVSQ-ESEMEVVNC  174 (176)
T ss_dssp             TTTEEEEECSSCSSCEEEEEETTEEEEE---------ESSSEEEEECSCCSSCEEEEEEETTEE-EEEEECCCC
T ss_pred             CcEEEEEEecCCCCcEEEEEECCEECCC---------CCcEEEEEEEccCCeEEEEEEEecCCC-ceecccccC
Confidence            3589999999999999999875444321         122455577789999999999999987 444444443

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=96.33  E-value=0.004  Score=62.26  Aligned_cols=72  Identities=24%  Similarity=0.392  Sum_probs=56.2

Q ss_pred             CCcccccCCCeeeeeecc-cCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCc
Q psy10163        347 EPTVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +..+.+.+|+.++|.|.+ .+.|.|.|.|.|+...+. ..+++.+...+   .|.|.++...|+|.|.|.+.|..|.
T Consensus         8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~   83 (312)
T 2y23_A            8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTE-DSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGI   83 (312)
T ss_dssp             CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECT-TCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCC
T ss_pred             ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECC-CCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCc
Confidence            455678899988887766 478999999988766554 34566555544   7999999999999999999987774

>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1

Probab=96.33  E-value=0.0041  Score=61.26  Aligned_cols=69  Identities=25%  Similarity=0.282  Sum_probs=51.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC--C-c---eeecC-------CCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK--G-E---VSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k--~-~---~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+  . .   .++..       ..+++.+..   ..+|.|.++...|+|.|.|.
T Consensus       148 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  227 (257)
T 1f3r_B          148 LLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCY  227 (257)
T ss_dssp             EECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEE
T ss_pred             EEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEE
Confidence            4567899999999999999999999976  2 1   11111       134555432   23799999999999999999


Q ss_pred             CCCCC
Q psy10163        413 AANGI  417 (615)
Q Consensus       413 a~n~~  417 (615)
                      +.|..
T Consensus       228 a~n~~  232 (257)
T 1f3r_B          228 QYNNG  232 (257)
T ss_dssp             EESSS
T ss_pred             EeCCC
Confidence            98863

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=96.33  E-value=0.0025  Score=63.23  Aligned_cols=82  Identities=15%  Similarity=0.072  Sum_probs=61.1

Q ss_pred             cccccCCCeeeeeecccCCCC--CeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI--PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~--P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      .+.+.+|+.++|.|.+.+ |.  |.|.|.+..........++.+...+.|.|..+...|+|.|.|.+.+..+......+.
T Consensus        98 ~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~  176 (292)
T 4dkd_C           98 EVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIR  176 (292)
T ss_dssp             EEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEE
T ss_pred             eEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEE
Confidence            456778999999999998 55  789997642222223456666667779999999999999999999887764445666


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|..
T Consensus       177 l~V~~  181 (292)
T 4dkd_C          177 LKVQK  181 (292)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            66654

>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}

Probab=96.32  E-value=0.0031  Score=55.44  Aligned_cols=83  Identities=28%  Similarity=0.368  Sum_probs=55.4

Q ss_pred             cccccCCCeeeeeeccc---CCCCCeeeccCCc------eeec-------------C--------CC--CceEEec--CC
Q psy10163        349 TVEAEEGNFVTLRCIAI---GYPIPVYTWSKGE------VSID-------------G--------SD--GHYKLTL--DG  394 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~---G~P~P~i~w~k~~------~~l~-------------~--------~~--g~~~~~~--~g  394 (615)
                      .+.+.+|+.++|.|.+.   +.+.+.|.|.+..      .++.             .        ..  +++.+..  ..
T Consensus        13 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~   92 (135)
T 1xt5_A           13 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP   92 (135)
T ss_dssp             EEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSC
T ss_pred             eEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCC
Confidence            46778999999999864   4688899996521      1111             0        11  5555433  36


Q ss_pred             eEEEeeccccCCceeeecCCCCCCcc----cccceeeeecc
Q psy10163        395 VLQIVGLVRQDAGIYVCVAANGIGDP----IRKEFNVIVRG  431 (615)
Q Consensus       395 sl~I~~~~~~DsG~Y~C~a~n~~G~p----~~~~~~l~V~~  431 (615)
                      +|.|.++...|+|.|.|.+.+.....    ....+.|.|.+
T Consensus        93 sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g  133 (135)
T 1xt5_A           93 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG  133 (135)
T ss_dssp             CEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred             eEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence            89999999999999999987754320    11345556654

>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*

Probab=96.30  E-value=0.0017  Score=62.76  Aligned_cols=81  Identities=17%  Similarity=0.107  Sum_probs=53.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceE-EecCC--eEEEeeccccCCceeeecCCCCCCc-ccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYK-LTLDG--VLQIVGLVRQDAGIYVCVAANGIGD-PIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~-~~~~g--sl~I~~~~~~DsG~Y~C~a~n~~G~-p~~~~~  425 (615)
                      ..+.+|+.++|.|.+.+ |.|.+.|.|+...+........ ....+  .|.|.++...|+|.|.|.+.|..|. .....+
T Consensus        18 ~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~   96 (218)
T 1uct_A           18 PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTL   96 (218)
T ss_dssp             SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCE
T ss_pred             CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCE
Confidence            45778999999999988 6889999874332211111111 12234  8999999999999999999987653 123345


Q ss_pred             eeeecc
Q psy10163        426 NVIVRG  431 (615)
Q Consensus       426 ~l~V~~  431 (615)
                      .|.|.+
T Consensus        97 ~l~V~~  102 (218)
T 1uct_A           97 ELVVTG  102 (218)
T ss_dssp             EEEEEC
T ss_pred             EEEEcC
Confidence            555644

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}

Probab=96.30  E-value=0.0018  Score=62.73  Aligned_cols=71  Identities=27%  Similarity=0.344  Sum_probs=53.4

Q ss_pred             cccccCCCeeeeeecccC---CCCCeeeccCCcee-----e------------------------cCCCCceEEec--CC
Q psy10163        349 TVEAEEGNFVTLRCIAIG---YPIPVYTWSKGEVS-----I------------------------DGSDGHYKLTL--DG  394 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G---~P~P~i~w~k~~~~-----l------------------------~~~~g~~~~~~--~g  394 (615)
                      .+.+.+|+.++|.|.+.+   .|.|.|.|.++...     +                        ..-.++..+..  +.
T Consensus        11 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~   90 (250)
T 2fbo_J           11 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP   90 (250)
T ss_dssp             EEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSC
T ss_pred             ceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcc
Confidence            467889999999999988   89999999774311     1                        01124443333  35


Q ss_pred             eEEEeeccccCCceeeecCCCCCCc
Q psy10163        395 VLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       395 sl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +|.|.++...|+|.|.|.+.+..+.
T Consensus        91 ~L~I~~v~~~D~G~Y~C~~~~~~~~  115 (250)
T 2fbo_J           91 TLRLTHVHPQDGGRYWCQVAQWSIR  115 (250)
T ss_dssp             CEEECSCCGGGCEEEEEEEECTTCC
T ss_pred             eEEEeeCChhhCeEEEEEeccCccC
Confidence            8999999999999999999987664

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=96.30  E-value=0.0014  Score=70.18  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=55.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCC----CceEEecCCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~----g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|+|.|+...+....    ..+      .+.+......|+|.|+|.|.|..|. ....
T Consensus       335 ~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~------~~~~~~~~~~D~G~YtC~A~N~~G~-~~~s  407 (423)
T 3qs7_E          335 DYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGY------SISKFCNHKHQPGEYIFHAENDDAQ-FTKM  407 (423)
T ss_dssp             EECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSS------EEEEECCCTTCCSCEEEEEEETTEE-EEEE
T ss_pred             cEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCc------EEEEEecccccCEEEEEEEEcCCce-EEEE
Confidence            4567789999999999999999999998665553221    122      1223556778999999999999997 6666


Q ss_pred             eeeeecc
Q psy10163        425 FNVIVRG  431 (615)
Q Consensus       425 ~~l~V~~  431 (615)
                      +.|.|.+
T Consensus       408 ~~L~v~~  414 (423)
T 3qs7_E          408 FTLNIRS  414 (423)
T ss_dssp             EEEC---
T ss_pred             EEEEEec
Confidence            7776644

>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}

Probab=96.29  E-value=0.0056  Score=57.28  Aligned_cols=81  Identities=21%  Similarity=0.208  Sum_probs=58.4

Q ss_pred             cccccCCCeeeeeecccC-CCCCeeeccCC--ceee--cC--------CC--CceEE-ecCCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIG-YPIPVYTWSKG--EVSI--DG--------SD--GHYKL-TLDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~--~~~l--~~--------~~--g~~~~-~~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+ .+.+.|.|.+.  ..++  ..        ..  +++.+ ..+++|.|.++...|+|.|.|.
T Consensus         8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~   87 (180)
T 2dru_A            8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMR   87 (180)
T ss_dssp             EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEE
T ss_pred             eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEE
Confidence            467889999999999854 45789999873  2111  10        12  67777 5678999999999999999999


Q ss_pred             CCCCCCcccccceeeeecc
Q psy10163        413 AANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V~~  431 (615)
                      +.+..  .....+.|.|.+
T Consensus        88 v~~~~--~~~~~~~L~V~~  104 (180)
T 2dru_A           88 MLHET--EDQWKITMEVYE  104 (180)
T ss_dssp             EESSS--EEEEEEEEEEEC
T ss_pred             EEcCC--eEEEEEEEEEEC
Confidence            76554  245556666644

>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}

Probab=96.28  E-value=0.003  Score=55.73  Aligned_cols=82  Identities=21%  Similarity=0.241  Sum_probs=57.3

Q ss_pred             cccccCCCeeeeeecccCCCCC---eeeccCCc----eee--cC----------CCCceEEecC------CeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP---VYTWSKGE----VSI--DG----------SDGHYKLTLD------GVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P---~i~w~k~~----~~l--~~----------~~g~~~~~~~------gsl~I~~~~~  403 (615)
                      .+.+..|+.++|.|.....+.+   .|.|.|..    +++  +.          -.++..+..+      .+|.|.++..
T Consensus        14 ~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~   93 (125)
T 4gos_A           14 ASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQL   93 (125)
T ss_dssp             CEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCG
T ss_pred             eEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCCh
Confidence            3567889999999987655433   58996532    111  10          0234444432      3799999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeecc
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.|.|.+.++.|. .+..+.|+|+.
T Consensus        94 ~D~G~Y~C~v~~~~g~-~~~~v~LkVG~  120 (125)
T 4gos_A           94 TDAGTYKCYIITSKGK-GNANLEYKTGH  120 (125)
T ss_dssp             GGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred             HHCEEEEEEEEeCCCe-EEEEEEEEECC
Confidence            9999999999988887 56777777754

>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A

Probab=96.28  E-value=0.0025  Score=54.71  Aligned_cols=67  Identities=27%  Similarity=0.456  Sum_probs=49.3

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCCc----e-eecCCCCceEEec-----CCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKGE----V-SIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~----~-~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.  |.+.|.|.+..    . .+....+++.+..     ..+|+|.++...|+|.|.|.+.+
T Consensus         9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~   87 (111)
T 2ywz_A            9 TITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY   87 (111)
T ss_dssp             EEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred             cEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence            4567899999999999876  57899996521    1 1212346665431     33799999999999999999876

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=96.28  E-value=0.0058  Score=60.74  Aligned_cols=80  Identities=18%  Similarity=0.170  Sum_probs=60.2

Q ss_pred             cccccCCCeeeeeecccCCCC-Ceeec-cCCceeecCCCCceEEecCCeEEEeeccccCCc-eeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI-PVYTW-SKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG-IYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~-P~i~w-~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG-~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.+ |. |.|+| .++...+. ...++.....+.|.|.++...|+| .|.|.+.|..+......+
T Consensus       100 ~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~-~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~  177 (290)
T 2o26_X          100 PLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP-TDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKF  177 (290)
T ss_dssp             CEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC-TTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCE
T ss_pred             ceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC-CCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEE
Confidence            456678999999999996 87 99999 55443332 345666677789999999999999 999999998655333345


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus       178 ~l~V~  182 (290)
T 2o26_X          178 TLKVR  182 (290)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55554

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=96.27  E-value=0.0032  Score=64.50  Aligned_cols=72  Identities=14%  Similarity=0.099  Sum_probs=54.3

Q ss_pred             CcccccCCCeeeeeecccCCCC-----------CeeeccCCcee----ecC---CCCceEEecCCeEEEeeccccCCcee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPI-----------PVYTWSKGEVS----IDG---SDGHYKLTLDGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~-----------P~i~w~k~~~~----l~~---~~g~~~~~~~gsl~I~~~~~~DsG~Y  409 (615)
                      ..+.+.+|+.++|.|.+.+.|.           |.|.|.++...    ...   ..+..+....+.|.|..+...|+|.|
T Consensus        15 ~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y   94 (349)
T 4dep_C           15 RQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNY   94 (349)
T ss_dssp             CCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEE
T ss_pred             eeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEE
Confidence            3467889999999999998775           99999874421    111   12233445577899999999999999


Q ss_pred             eecCCCCCCc
Q psy10163        410 VCVAANGIGD  419 (615)
Q Consensus       410 ~C~a~n~~G~  419 (615)
                      .|.+.|..+.
T Consensus        95 ~C~a~n~~~~  104 (349)
T 4dep_C           95 TCMLRNTTYC  104 (349)
T ss_dssp             EEEEECSSCE
T ss_pred             EEEEecCCce
Confidence            9999987664

>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A

Probab=96.27  E-value=0.0057  Score=53.32  Aligned_cols=68  Identities=22%  Similarity=0.278  Sum_probs=50.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeecC-------CCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++..       ..+++.+..   ..+|.|.++...|+|.|.|.
T Consensus        12 ~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   91 (119)
T 2e27_L           12 SLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYCL   91 (119)
T ss_dssp             EEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred             eEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEEE
Confidence            46688999999999999998899999542      222211       135665542   23799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        92 ~~~~   95 (119)
T 2e27_L           92 QYDN   95 (119)
T ss_dssp             ECGG
T ss_pred             EccC
Confidence            8764

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=96.25  E-value=0.0014  Score=69.87  Aligned_cols=70  Identities=26%  Similarity=0.289  Sum_probs=53.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+         ...|.+.  .+...|+|.|.|.|.|..|. ....+.|.
T Consensus       379 ~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~---------~~~g~~~--~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~  446 (450)
T 1z7z_I          379 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP---------LPIGESV--TVTRDLEGTYLCRARSTQGE-VTREVTVN  446 (450)
T ss_dssp             EEEEETTCEECCCCCCEEESCCEEEEEETTTEE---------CCTTSCE--ECCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             ceeEcCCCeEEEEEecccCCCCcEEEEECCccc---------CCCCCeE--eEehhhCeEEEEEEEeCCCc-eeEEEEEE
Confidence            456778999999999999999999998743211         1223322  57789999999999999997 56666666


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus       447 V~  448 (450)
T 1z7z_I          447 VL  448 (450)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*

Probab=96.24  E-value=0.0037  Score=59.58  Aligned_cols=70  Identities=21%  Similarity=0.245  Sum_probs=54.2

Q ss_pred             ccccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.+.|.|. |.|.++...+...        .+.|.|.++...|+|.|.|.+.|...   ...+.|.
T Consensus        17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~~~---s~~~~l~   85 (204)
T 3sgj_C           17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ--------ASSYFIDAATVDDSGEYRCQTQLSTL---SDPVQLE   85 (204)
T ss_dssp             SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC--------SSEEEESSCCGGGCEEEEEEETTSBC---CCCEEEE
T ss_pred             eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC--------ccEEEEecccccCCEEEEEEeCCCcc---cccEEEE
Confidence            5677999999999999999886 9998865554322        27899999999999999999987533   3345555


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        86 V~   87 (204)
T 3sgj_C           86 VH   87 (204)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=96.24  E-value=0.0036  Score=70.04  Aligned_cols=71  Identities=20%  Similarity=0.370  Sum_probs=56.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+.         ....|.|..+...|+|.|.|.|.|..|. ....+.|.
T Consensus       568 ~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~---------~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~s~~l~  637 (642)
T 1e07_A          568 DSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQ---------HTQVLFIAKITPNNNGTYACFVSNLATG-RNNSIVKS  637 (642)
T ss_pred             ceeEEcCCcEEEEEEeccCCCCeEEEEECCEECc---------cCceEEECcccccCCeEEEEEEEecccC-cceeEEEE
Confidence            3567789999999999999999999998654443         2357899999999999999999999997 44444444


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus       638 V  638 (642)
T 1e07_A          638 I  638 (642)
T ss_pred             E
Confidence            4

>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A

Probab=96.24  E-value=0.0044  Score=54.13  Aligned_cols=66  Identities=24%  Similarity=0.438  Sum_probs=47.7

Q ss_pred             CcccccCCCeeeeeecccCCCCC----eeeccCCc-------e-ee--------cC---CCCceEEecCC----------
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIP----VYTWSKGE-------V-SI--------DG---SDGHYKLTLDG----------  394 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P----~i~w~k~~-------~-~l--------~~---~~g~~~~~~~g----------  394 (615)
                      ..+.+.+|+.++|.|.+.+.+.+    .|.|.+..       . ++        ..   -.++..+..+.          
T Consensus        10 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~   89 (128)
T 3r0n_A           10 PEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAE   89 (128)
T ss_dssp             SEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCB
T ss_pred             CeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccC
Confidence            34677899999999999887766    89997741       0 11        00   12455554442          


Q ss_pred             ----eEEEeeccccCCceeeecC
Q psy10163        395 ----VLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       395 ----sl~I~~~~~~DsG~Y~C~a  413 (615)
                          +|.|.++...|+|.|.|..
T Consensus        90 ~~~~sL~I~~v~~~D~G~Y~C~v  112 (128)
T 3r0n_A           90 LQDATLALHGLTVEDEGNYTCEF  112 (128)
T ss_dssp             CSBCCEEECSCCGGGCEEEEEEE
T ss_pred             CCCeEEEEccCCchhCeEEEEEE
Confidence                8999999999999999964

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}

Probab=96.23  E-value=0.0043  Score=58.29  Aligned_cols=73  Identities=23%  Similarity=0.235  Sum_probs=53.0

Q ss_pred             CCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        354 EGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       354 eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +++.++|.|.+.+. |.|.|.|.++...+... .++.+...+   .|.|.++...|+|.|.|.+.+..|. ....+.+.
T Consensus        16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~   92 (212)
T 2r15_A           16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLS   92 (212)
T ss_dssp             CSSEEEEEEEBSSCCSSCEEEEEETTEECCCC-SSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEEC
T ss_pred             cCceEEEEEEEeccCCCceEEEEECCEEccCC-CeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcc-eEEEEEEE
Confidence            45677888988884 69999998866555432 455444333   4999999999999999999998776 33344443

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*

Probab=96.23  E-value=0.0027  Score=62.26  Aligned_cols=80  Identities=24%  Similarity=0.368  Sum_probs=57.5

Q ss_pred             cccccCCCeeeeeecc---cCCCCCeeeccCC-------ceee----------cCCCC----ceEE-----ecCCeEEEe
Q psy10163        349 TVEAEEGNFVTLRCIA---IGYPIPVYTWSKG-------EVSI----------DGSDG----HYKL-----TLDGVLQIV  399 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~---~G~P~P~i~w~k~-------~~~l----------~~~~g----~~~~-----~~~gsl~I~  399 (615)
                      .+.+.+|+.++|.|.+   .+.|.|.|.|.+.       ..++          ....+    +..+     ...++|.|.
T Consensus       127 ~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~  206 (268)
T 3mj6_A          127 DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQ  206 (268)
T ss_dssp             EEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEEC
T ss_pred             ccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEEC
Confidence            4567789999999999   7889999999762       1111          00111    2222     235689999


Q ss_pred             eccccCCceeeecCCCCCCcccccceeeee
Q psy10163        400 GLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       400 ~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .+...|+|.|.|.+.|..|. ....+.|.|
T Consensus       207 ~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V  235 (268)
T 3mj6_A          207 TVKESDQGIYTCSIYVGKLE-SRKTIVLHV  235 (268)
T ss_dssp             SCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred             cCChhhCeEEEEEEEcCCce-EEEEEEEEE
Confidence            99999999999999998776 555566666

>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A

Probab=96.23  E-value=0.0088  Score=51.14  Aligned_cols=68  Identities=19%  Similarity=0.273  Sum_probs=50.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+.      ..++.       ...+++.+..   ..+|+|.++...|+|.|.|.
T Consensus        13 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   92 (111)
T 1i3g_L           13 FMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQ   92 (111)
T ss_dssp             EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred             EEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEEE
Confidence            46778999999999999888889999542      22221       1135665542   23699999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        93 ~~~~   96 (111)
T 1i3g_L           93 QYSS   96 (111)
T ss_dssp             ECSS
T ss_pred             EecC
Confidence            8764

>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A

Probab=96.22  E-value=0.002  Score=71.36  Aligned_cols=84  Identities=23%  Similarity=0.351  Sum_probs=64.0

Q ss_pred             CcccccCCCeeeeeecc-cCCCCCeeeccCCceee------cCC-----CCceEEecCCeEEEeeccccCCceeeecCCC
Q psy10163        348 PTVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSI------DGS-----DGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l------~~~-----~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      ..+.+.+|+.++|.|.+ .+.|.|.|+|.++...+      ...     .++..+..+++|.|.++...|+|.|+|.+.+
T Consensus       374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n  453 (581)
T 3o3u_N          374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN  453 (581)
T ss_dssp             EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred             cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence            34677889999999999 89999999997632211      001     3566777788999999999999999999999


Q ss_pred             CCCcccccceeeeecc
Q psy10163        416 GIGDPIRKEFNVIVRG  431 (615)
Q Consensus       416 ~~G~p~~~~~~l~V~~  431 (615)
                      ..|......+.|.|..
T Consensus       454 ~~~~~~~~~~~l~V~~  469 (581)
T 3o3u_N          454 RNGKETKSNYRVRVYQ  469 (581)
T ss_dssp             TTSCEEEEEEEEEEEB
T ss_pred             CCCceeEEEEEEEEEc
Confidence            8887435556666643

>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A

Probab=96.22  E-value=0.0025  Score=60.39  Aligned_cols=70  Identities=19%  Similarity=0.350  Sum_probs=52.2

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCC---c---eeec-----------CCCCceEEec---CCeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKG---E---VSID-----------GSDGHYKLTL---DGVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~---~---~~l~-----------~~~g~~~~~~---~gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+. |.+.|.|.+.   .   .++.           ...+++.+..   ..+|.|.++...|+|
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G   88 (218)
T 3s96_B            9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA   88 (218)
T ss_dssp             EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence            4678899999999999999 9999999651   1   1111           0113555432   346999999999999


Q ss_pred             eeeecCCCCCC
Q psy10163        408 IYVCVAANGIG  418 (615)
Q Consensus       408 ~Y~C~a~n~~G  418 (615)
                      .|.|.+.+..|
T Consensus        89 ~Y~C~~~~~~~   99 (218)
T 3s96_B           89 IYICGVGDTIK   99 (218)
T ss_dssp             EEEEEEEEEET
T ss_pred             EEEEEEecCCC
Confidence            99999988765

>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}

Probab=96.21  E-value=0.0012  Score=62.06  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=54.8

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCCeEEEeeccccCCceeeecCCCCCCcc-cccceeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDP-IRKEFNVI  428 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p-~~~~~~l~  428 (615)
                      .+.+|+.++|.|.+.+.|. .+.|.|+...+.... ........+.|.|.++...|+|.|.|.+.|..|.. ....+.|.
T Consensus        15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~   93 (196)
T 2d3v_A           15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELV   93 (196)
T ss_dssp             EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEE
T ss_pred             cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEE
Confidence            5678999999999999876 899987543331100 00112234579999999999999999998876642 23445555


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        94 V~~   96 (196)
T 2d3v_A           94 VTG   96 (196)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            644

>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E

Probab=96.16  E-value=0.0043  Score=60.20  Aligned_cols=70  Identities=14%  Similarity=0.350  Sum_probs=51.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceee----------cC--CCCceEEec----CCeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSI----------DG--SDGHYKLTL----DGVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l----------~~--~~g~~~~~~----~gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+.      ..++          ..  ..+++.+..    ..+|.|.++...|+
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~   89 (246)
T 4dzb_B           10 WVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS   89 (246)
T ss_dssp             EEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred             EEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence            35678999999999999999999999651      1111          10  115665543    23799999999999


Q ss_pred             ceeeecCCCCCC
Q psy10163        407 GIYVCVAANGIG  418 (615)
Q Consensus       407 G~Y~C~a~n~~G  418 (615)
                      |.|.|.+.+..+
T Consensus        90 G~Y~C~~~~~~~  101 (246)
T 4dzb_B           90 SFYICSARTSGD  101 (246)
T ss_dssp             EEEEEEECCSSG
T ss_pred             EEEEEEEecCCC
Confidence            999999987543

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=96.15  E-value=0.0035  Score=65.02  Aligned_cols=69  Identities=26%  Similarity=0.464  Sum_probs=55.5

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCC---eEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|.+.|+|.|.|.|.++...+.... .++.+..++   .|.|.++...|+|.|.|.|.|..|.
T Consensus       111 ~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~  183 (389)
T 2jll_A          111 YSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGT  183 (389)
T ss_dssp             EECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEE
T ss_pred             EeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCc
Confidence            56789999999999999999999988665554322 345544433   6999999999999999999999886

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*

Probab=96.14  E-value=0.0061  Score=56.01  Aligned_cols=70  Identities=21%  Similarity=0.236  Sum_probs=53.6

Q ss_pred             ccccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.+.|.|. +.|.++...+.        ...+.|.|.++...|+|.|.|.+.+..+   ...+.|.
T Consensus        17 ~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~---s~~~~l~   85 (175)
T 1fnl_A           17 YSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--------SQASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQLE   85 (175)
T ss_dssp             SEEETTCCEEEEEECCCBTTBCCCEEEETTEEEE--------SSCSEEEESSCCGGGCEEEEEECSSSCC---CCCEEEE
T ss_pred             eeeeCCCcEEEEeeCCCCCCCcceEEEECCEEcc--------CCceEEEEeCCCcccCEEEEEEeeCCcc---cccEEEE
Confidence            4677899999999999999887 78987544443        2356899999999999999999998644   2344455


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        86 V~   87 (175)
T 1fnl_A           86 VH   87 (175)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}

Probab=96.11  E-value=0.0075  Score=59.13  Aligned_cols=71  Identities=20%  Similarity=0.342  Sum_probs=51.3

Q ss_pred             CcccccCCCeeeeeecccCCCC-CeeeccC---Cc---eeec-------CCCCceEEecCC---eEEEeeccccCCceee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPI-PVYTWSK---GE---VSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYV  410 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~-P~i~w~k---~~---~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~  410 (615)
                      ..+.+.+|+.++|.|.+.+.|. |.|.|.+   +.   .++.       ...+++.....+   +|.|.++...|+|.|.
T Consensus       157 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~  236 (256)
T 3juy_B          157 GTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYY  236 (256)
T ss_dssp             SEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred             CeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEE
Confidence            3467789999999999999886 9999954   11   1111       123455544333   5999999999999999


Q ss_pred             ecCCCCCC
Q psy10163        411 CVAANGIG  418 (615)
Q Consensus       411 C~a~n~~G  418 (615)
                      |.+.+...
T Consensus       237 C~~~~~~~  244 (256)
T 3juy_B          237 CQVYGASS  244 (256)
T ss_dssp             EEECCSSC
T ss_pred             EEEeeCCC
Confidence            99988543

>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}

Probab=96.10  E-value=0.0017  Score=62.52  Aligned_cols=71  Identities=23%  Similarity=0.407  Sum_probs=40.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC---c---eeec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG---E---VSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~---~---~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.   .   .++.       ...+++.....+   +|.|.++...|+|.|.|.
T Consensus        32 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~  111 (233)
T 3bqu_C           32 SLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCL  111 (233)
T ss_dssp             BC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEE
T ss_pred             eEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEE
Confidence            34577899999999999999899999541   1   1110       112344333222   799999999999999999


Q ss_pred             CCCCCCc
Q psy10163        413 AANGIGD  419 (615)
Q Consensus       413 a~n~~G~  419 (615)
                      +.+..+.
T Consensus       112 ~~~~~~~  118 (233)
T 3bqu_C          112 QSDNLPY  118 (233)
T ss_dssp             ECSSSSC
T ss_pred             EecCCce
Confidence            9887653

>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*

Probab=96.09  E-value=0.0019  Score=60.60  Aligned_cols=82  Identities=22%  Similarity=0.241  Sum_probs=56.8

Q ss_pred             ccccCCCeeeeeeccc----CCCCCeeeccCCceeec-CC----------CCceEE--ecCCeEEEeeccccCCceeeec
Q psy10163        350 VEAEEGNFVTLRCIAI----GYPIPVYTWSKGEVSID-GS----------DGHYKL--TLDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~----G~P~P~i~w~k~~~~l~-~~----------~g~~~~--~~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      +.+.+|+.++|.|.+.    +.|.|.+.|.++...+. ..          .++..+  ..+++|.|.++...|+|.|.|.
T Consensus         4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~   83 (201)
T 1dr9_A            4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV   83 (201)
T ss_dssp             EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred             EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence            5677899999999985    55788999987543331 00          123332  2346899999999999999999


Q ss_pred             CCCCCCccc----ccceeeeecc
Q psy10163        413 AANGIGDPI----RKEFNVIVRG  431 (615)
Q Consensus       413 a~n~~G~p~----~~~~~l~V~~  431 (615)
                      +.+..|...    ...+.|.|..
T Consensus        84 ~~~~~g~~~~~~~~~~~~l~V~~  106 (201)
T 1dr9_A           84 VLKYEKDAFKREHLAEVTLSVKA  106 (201)
T ss_dssp             EEECCTTSCEEEEEEEEEEEEEC
T ss_pred             EEcCCCCccccccccEEEEEEcC
Confidence            999776533    2345555544

>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A

Probab=96.08  E-value=0.0079  Score=58.42  Aligned_cols=71  Identities=15%  Similarity=0.230  Sum_probs=52.7

Q ss_pred             cccccCCCeeeeeecccCCC-----CCeeeccCC---c---eeecC-------CCCceEEecC---CeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-----IPVYTWSKG---E---VSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-----~P~i~w~k~---~---~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|     .|.|.|.+.   .   .++..       ..+++.+...   .+|.|.++...|+|
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G   89 (247)
T 1svz_A           10 YLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG   89 (247)
T ss_dssp             EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             eEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCE
Confidence            45678999999999999998     699999652   1   11111       1356655433   27999999999999


Q ss_pred             eeeecCCCCCCc
Q psy10163        408 IYVCVAANGIGD  419 (615)
Q Consensus       408 ~Y~C~a~n~~G~  419 (615)
                      .|.|.+.+..+.
T Consensus        90 ~Y~C~~~n~~~~  101 (247)
T 1svz_A           90 IYYCFQGSHFPP  101 (247)
T ss_dssp             EEEEEECSSSSC
T ss_pred             EEEEEEccCCcc
Confidence            999999887553

>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A

Probab=96.06  E-value=0.0085  Score=51.11  Aligned_cols=68  Identities=19%  Similarity=0.215  Sum_probs=49.7

Q ss_pred             cccccCCCeeeeeecccCCC----CCeeeccCC------ceeecC-------CCCceEEecC---CeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP----IPVYTWSKG------EVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~------~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.+    .+.|.|.+.      ..++..       ..+++.+...   .+|.|.++...|+|.
T Consensus        10 ~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~   89 (111)
T 1j05_L           10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT   89 (111)
T ss_dssp             EEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred             EEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCEE
Confidence            35678999999999998887    578999542      112211       1356665432   279999999999999


Q ss_pred             eeecCCCC
Q psy10163        409 YVCVAANG  416 (615)
Q Consensus       409 Y~C~a~n~  416 (615)
                      |.|.+.+.
T Consensus        90 Y~C~~~~~   97 (111)
T 1j05_L           90 YYCQQTNE   97 (111)
T ss_dssp             EEEEECSS
T ss_pred             EEEEEecC
Confidence            99998764

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=96.06  E-value=0.0054  Score=67.66  Aligned_cols=83  Identities=20%  Similarity=0.207  Sum_probs=60.1

Q ss_pred             cccccCCCeeeeeeccc----CCCCCeeeccCCceeecCC--CCc---eEEec-C---CeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAI----GYPIPVYTWSKGEVSIDGS--DGH---YKLTL-D---GVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~----G~P~P~i~w~k~~~~l~~~--~g~---~~~~~-~---gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.    |.|.|.|.|.++...+...  .++   ++... .   ..|.|..+...|+|.|.|.|.|
T Consensus       451 ~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N  530 (585)
T 2ocw_A          451 NVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQ  530 (585)
T ss_pred             ceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEe
Confidence            45677899999999886    8899999998855433211  121   33322 1   3799999999999999999999


Q ss_pred             CCCcccccceeeeecc
Q psy10163        416 GIGDPIRKEFNVIVRG  431 (615)
Q Consensus       416 ~~G~p~~~~~~l~V~~  431 (615)
                      ..|......+.|.|.+
T Consensus       531 ~~G~~~~~~~~l~V~~  546 (585)
T 2ocw_A          531 GHFYGETAAVYVAVEE  546 (585)
T ss_pred             CCCccEEEEEEEEEEe
Confidence            9986333446677754

>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1

Probab=96.06  E-value=0.005  Score=60.58  Aligned_cols=69  Identities=19%  Similarity=0.297  Sum_probs=52.2

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceeec-----------CCCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSID-----------GSDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~-----------~~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.|.|  .|.|.|.+.      ..++.           ...+++.+..+     .+|+|.++...|
T Consensus        10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D   89 (257)
T 1f3r_B           10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD   89 (257)
T ss_dssp             SEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred             ccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence            4577899999999999986  789999652      11111           01357766542     389999999999


Q ss_pred             CceeeecCCCCCC
Q psy10163        406 AGIYVCVAANGIG  418 (615)
Q Consensus       406 sG~Y~C~a~n~~G  418 (615)
                      +|.|.|.+.+..|
T Consensus        90 sG~Y~C~a~n~~g  102 (257)
T 1f3r_B           90 TGTYYCTRDLYGG  102 (257)
T ss_dssp             CEEEEEEEESSSS
T ss_pred             CEEEEEEEccccc
Confidence            9999999998765

>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A

Probab=96.04  E-value=0.0055  Score=58.34  Aligned_cols=67  Identities=16%  Similarity=0.216  Sum_probs=46.7

Q ss_pred             ccccCCCee-eeeecc-cCCCCCeeeccCCceeecCCC---CceEEecC------------CeEEEeeccccCCceeeec
Q psy10163        350 VEAEEGNFV-TLRCIA-IGYPIPVYTWSKGEVSIDGSD---GHYKLTLD------------GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       350 v~~~eg~~~-tl~C~~-~G~P~P~i~w~k~~~~l~~~~---g~~~~~~~------------gsl~I~~~~~~DsG~Y~C~  412 (615)
                      +.+.+|+.+ +|.|.+ .+.|.|.|.|.++...+....   +++.+...            ..|.|......|.|.|.|.
T Consensus       128 ~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~  207 (231)
T 2pet_A          128 LSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCA  207 (231)
T ss_dssp             CCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEE
T ss_pred             eeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEE
Confidence            345578777 999999 899999999988665554333   34333321            3466654455569999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      |.|.
T Consensus       208 a~n~  211 (231)
T 2pet_A          208 AHYS  211 (231)
T ss_dssp             EEEE
T ss_pred             EEcC
Confidence            9985

>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*

Probab=96.04  E-value=0.0041  Score=58.35  Aligned_cols=71  Identities=24%  Similarity=0.316  Sum_probs=50.3

Q ss_pred             cccccCCCeeeeeecccCCCCCe---eeccCCc-eeec--------------CCCCceEE----------ecCCeEEEee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPV---YTWSKGE-VSID--------------GSDGHYKL----------TLDGVLQIVG  400 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~---i~w~k~~-~~l~--------------~~~g~~~~----------~~~gsl~I~~  400 (615)
                      .+.+.+|+.++|.|.+.+.|.+.   |.|.|+. ..+.              ...++..+          ..+++|.|.+
T Consensus        10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~   89 (225)
T 4fmk_A           10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG   89 (225)
T ss_dssp             EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred             EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence            46788999999999999988774   7897732 1110              00112211          1245799999


Q ss_pred             ccccCCceeeecCCCCCCc
Q psy10163        401 LVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       401 ~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +...|+|.|.|.+.+..+.
T Consensus        90 v~~~D~G~Y~C~~~~~~~~  108 (225)
T 4fmk_A           90 LRVEDEGNYTCEFATFPNG  108 (225)
T ss_dssp             CCGGGCEEEEEEEEEETTE
T ss_pred             CCHHHCcceEEEEEeCCCc
Confidence            9999999999998877665

>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}

Probab=96.01  E-value=0.0081  Score=51.26  Aligned_cols=82  Identities=27%  Similarity=0.331  Sum_probs=54.5

Q ss_pred             CcccccCCCeeeeeecccC-CCCCeeeccCCc--------eeec--------CCCCceEEec-----CCeEEEeeccccC
Q psy10163        348 PTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGE--------VSID--------GSDGHYKLTL-----DGVLQIVGLVRQD  405 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~--------~~l~--------~~~g~~~~~~-----~gsl~I~~~~~~D  405 (615)
                      ..+.+.+|+.++|.|...+ ...+.|.|.+..        .++.        ...+++.+..     ..+|.|.++...|
T Consensus         5 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D   84 (116)
T 2or8_A            5 VEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESD   84 (116)
T ss_dssp             EEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGG
T ss_pred             ceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCccc
Confidence            3467889999999999875 346679996543        1221        1235555432     2479999999999


Q ss_pred             CceeeecCCCCCCcc-cccceeeee
Q psy10163        406 AGIYVCVAANGIGDP-IRKEFNVIV  429 (615)
Q Consensus       406 sG~Y~C~a~n~~G~p-~~~~~~l~V  429 (615)
                      +|.|.|.+.+..+.. ....+.|.|
T Consensus        85 sG~Y~C~v~~~~~~~~~~~~~~l~V  109 (116)
T 2or8_A           85 SGLYCCRVEIPGWFNDQKVTFSLQV  109 (116)
T ss_dssp             CEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred             CEEEEEEEEcCCcccccEEEEEEEE
Confidence            999999988764431 133444544

>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A

Probab=96.00  E-value=0.0062  Score=57.43  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=46.1

Q ss_pred             ccCCCeeeeeecccCC----CCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        352 AEEGNFVTLRCIAIGY----PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~----P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+|+.++|.|.+.+.    |.|.|+|.++...+.  .+.  ....+.|.|..+...|.|.|.|.|.|..+
T Consensus       135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~--~~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~  201 (214)
T 2zg1_A          135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPL--DPE--TTRSSELTLTPRPEDHGTNLTCQMKRQGA  201 (214)
T ss_dssp             CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSS--CSS--CCCSSEEEECCCTTCCSCEEEEEEECC--
T ss_pred             ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccC--CCC--ceeEEEEEEecccHHcCcEEEEEEEeCCC
Confidence            4578999999999874    899999987542211  111  13456788888888889999999999754

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*

Probab=95.99  E-value=0.0051  Score=56.52  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.+.|.| .|.|.++...+.        ...++|.|.++...|+|.|.|.+.+..+.   ..+.|.
T Consensus        14 ~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s---~~~~l~   82 (176)
T 1f2q_A           14 NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE--------ETNSSLNIVNAKFEDSGEYKCQHQQVNES---EPVYLE   82 (176)
T ss_dssp             SEEETTCCEEEECCTTCC----CCEEEETTEECS--------CCSSEEEECSCCGGGCEEEEEECTTSSCC---CCEEEE
T ss_pred             cceecCCcEEEEEeCCCCCCcceEEEEECCeECC--------CCceEEEEeccceecCEEEEEEcCCcccc---ccEEEE
Confidence            567899999999999999986 699987654443        13568999999999999999999986543   334444


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        83 V~   84 (176)
T 1f2q_A           83 VF   84 (176)
T ss_dssp             EE
T ss_pred             Ee
Confidence            43

>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A

Probab=95.97  E-value=0.0029  Score=61.04  Aligned_cols=69  Identities=20%  Similarity=0.367  Sum_probs=51.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eeec-------CCCCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSID-------GSDGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l~-------~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+..      .++.       ...+++.+..     ..+|.|.++...|+|.|.
T Consensus       136 ~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~  215 (238)
T 2p1y_A          136 SLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYF  215 (238)
T ss_dssp             EEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEE
T ss_pred             eEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEE
Confidence            356789999999999999999999997631      1211       1134555442     247999999999999999


Q ss_pred             ecCCCCC
Q psy10163        411 CVAANGI  417 (615)
Q Consensus       411 C~a~n~~  417 (615)
                      |.+.|..
T Consensus       216 C~a~n~~  222 (238)
T 2p1y_A          216 CAAIDTN  222 (238)
T ss_dssp             EEEEETT
T ss_pred             EEEeeCC
Confidence            9999863

>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...

Probab=95.96  E-value=0.01  Score=50.89  Aligned_cols=68  Identities=18%  Similarity=0.308  Sum_probs=49.6

Q ss_pred             cccccCCCeeeeeecccCCCC------CeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI------PVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~------P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+.+.      +.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+
T Consensus        10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds   89 (114)
T 1eeq_A           10 SLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDV   89 (114)
T ss_dssp             EEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             eEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccC
Confidence            467889999999999988873      78999542      12221       11356655432   2799999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      |.|.|.+.+.
T Consensus        90 G~Y~C~~~~~   99 (114)
T 1eeq_A           90 AVYYCQQYYS   99 (114)
T ss_dssp             EEEEEEECSS
T ss_pred             EEEEEEEeeC
Confidence            9999998764

>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...

Probab=95.96  E-value=0.0068  Score=57.51  Aligned_cols=70  Identities=24%  Similarity=0.339  Sum_probs=50.2

Q ss_pred             cccccCCCeeeeeeccc-CCC-CCeeeccCCc------eee-------cCCCCceEEecCC---eEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYP-IPVYTWSKGE------VSI-------DGSDGHYKLTLDG---VLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P-~P~i~w~k~~------~~l-------~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+. +.| .|.|.|.+..      .++       ....+++.+...+   +|.|.++...|+|.|.
T Consensus         9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~   88 (216)
T 2xzc_L            9 SVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYY   88 (216)
T ss_dssp             EEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred             cEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEE
Confidence            35678999999999954 443 6899996521      111       1113466555333   7999999999999999


Q ss_pred             ecCCCCCC
Q psy10163        411 CVAANGIG  418 (615)
Q Consensus       411 C~a~n~~G  418 (615)
                      |.+.+..+
T Consensus        89 C~~~~~~~   96 (216)
T 2xzc_L           89 CGTWDSSL   96 (216)
T ss_dssp             EEEECTTS
T ss_pred             EEEEeCCC
Confidence            99998765

>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A

Probab=95.95  E-value=0.0017  Score=61.16  Aligned_cols=81  Identities=20%  Similarity=0.269  Sum_probs=56.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEecCCeEEEeeccccCCceeeecCCCCC-Cc-cccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI-GD-PIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~-G~-p~~~~~~  426 (615)
                      ..+.+|+.++|.|.+.+.|. .+.|.|+...+... .........+.|.|.++...|+|.|.|.+.|.. |. .....+.
T Consensus        14 ~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~   92 (198)
T 1ugn_A           14 SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLE   92 (198)
T ss_dssp             SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEE
T ss_pred             CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEE
Confidence            45778999999999999986 69998754333110 011112345689999999999999999998876 42 2344555


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|.+
T Consensus        93 l~V~~   97 (198)
T 1ugn_A           93 LVVTG   97 (198)
T ss_dssp             EEEEC
T ss_pred             EEEcc
Confidence            66654

>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A

Probab=95.94  E-value=0.0055  Score=59.07  Aligned_cols=69  Identities=17%  Similarity=0.185  Sum_probs=50.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eee----------cCCCCceEEec----CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSI----------DGSDGHYKLTL----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l----------~~~~g~~~~~~----~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|. .+.|.|.|.|.+..      .++          ....+++.+..    ..+|.|.++...|+|.
T Consensus         9 ~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~   87 (238)
T 2p1y_A            9 NKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV   87 (238)
T ss_dssp             EEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred             ceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence            467889999999999 88999999997631      111          11134555542    3479999999999999


Q ss_pred             eeecCCCCCC
Q psy10163        409 YVCVAANGIG  418 (615)
Q Consensus       409 Y~C~a~n~~G  418 (615)
                      |.|.+.+..|
T Consensus        88 Y~C~~~~~~g   97 (238)
T 2p1y_A           88 YFCASGDLGQ   97 (238)
T ss_dssp             EEEEEEC---
T ss_pred             EEEEEEeCCC
Confidence            9999988755

>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=95.92  E-value=0.0081  Score=60.09  Aligned_cols=82  Identities=18%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC--C-ce---eec-------CCCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK--G-EV---SID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k--~-~~---~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.| |.|.|.|  . ..   ++.       ...+++....   ..+|+|.++...|+|.|.|.
T Consensus       171 ~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~  249 (282)
T 1qok_A          171 IMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQ  249 (282)
T ss_dssp             EEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEE
Confidence            35678999999999999999 9999976  2 11   111       1134555432   23699999999999999999


Q ss_pred             CCCCCCcccccceeeeecc
Q psy10163        413 AANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       413 a~n~~G~p~~~~~~l~V~~  431 (615)
                      +.+...........|.|.+
T Consensus       250 a~~~~~~~fg~gt~l~V~~  268 (282)
T 1qok_A          250 QRSSYPLTFGAGTKLELKR  268 (282)
T ss_dssp             ECSSSSCEECCCEEEEEC-
T ss_pred             EeeCCCceEeCCEEEEEec
Confidence            9875333223334455543

>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A

Probab=95.92  E-value=0.008  Score=58.79  Aligned_cols=71  Identities=24%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCC------ceee------------cCCCCceEEecCC-----eEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSI------------DGSDGHYKLTLDG-----VLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l------------~~~~g~~~~~~~g-----sl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.|.+  .+.|.|.+.      .+++            ....+++.+..+.     +|.|.++..
T Consensus        10 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~   89 (253)
T 3uzq_A           10 AELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTS   89 (253)
T ss_dssp             CEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred             CeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCc
Confidence            35677999999999998855  789999651      1111            0113566655433     399999999


Q ss_pred             cCCceeeecCCCCCCc
Q psy10163        404 QDAGIYVCVAANGIGD  419 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~  419 (615)
                      .|+|.|.|.+.+..+.
T Consensus        90 ~DsG~Y~C~~~~~~~~  105 (253)
T 3uzq_A           90 GDTAVYYCSRGWEGFA  105 (253)
T ss_dssp             GGCEEEEEEECSSSCC
T ss_pred             ccCEEEEEEEeeCCcc
Confidence            9999999999986554

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=95.90  E-value=0.0045  Score=71.43  Aligned_cols=71  Identities=27%  Similarity=0.498  Sum_probs=54.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeec-----CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-----GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~-----~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|+|.++...+.     ..........+++|.|.++...|+|.|.|.|.|..|.
T Consensus       723 ~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  798 (816)
T 3dmk_A          723 DKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGS  798 (816)
T ss_dssp             CEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSS
T ss_pred             cceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCC
Confidence            3556789999999999999999999987422111     0111122346779999999999999999999999998

>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L

Probab=95.90  E-value=0.0088  Score=59.53  Aligned_cols=68  Identities=22%  Similarity=0.378  Sum_probs=51.9

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCCc------eee------------cCCCCceEEecCC-----eEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSI------------DGSDGHYKLTLDG-----VLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l------------~~~~g~~~~~~~g-----sl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|  .|.|.|.+..      .++            ....+++.+..++     +|.|.++..
T Consensus       143 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~  222 (276)
T 3auv_A          143 GGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRA  222 (276)
T ss_dssp             CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred             ceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCCh
Confidence            35678899999999999887  5899997631      111            1124577665432     799999999


Q ss_pred             cCCceeeecCCCC
Q psy10163        404 QDAGIYVCVAANG  416 (615)
Q Consensus       404 ~DsG~Y~C~a~n~  416 (615)
                      .|+|.|.|.+.|.
T Consensus       223 ~DsG~Y~C~a~n~  235 (276)
T 3auv_A          223 EDTAVYYCARFVF  235 (276)
T ss_dssp             GGCEEEEEEEECS
T ss_pred             hHCEEEEEEEEcC
Confidence            9999999999987

>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1

Probab=95.89  E-value=0.0051  Score=59.72  Aligned_cols=67  Identities=22%  Similarity=0.451  Sum_probs=50.9

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCCc------eee------------cCCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSI------------DGSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l------------~~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.|.|  .|.|.|.+..      .++            ....+++.+..+     .+|.|.++...
T Consensus        12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~   91 (247)
T 2ghw_B           12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE   91 (247)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             EEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence            5678999999999999988  6889996521      111            112357766542     36999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.+.
T Consensus        92 D~G~Y~C~~~n~  103 (247)
T 2ghw_B           92 DTAVYYCARDRS  103 (247)
T ss_dssp             GCEEEEEEEEET
T ss_pred             HCEEEEEeeecc
Confidence            999999999886

>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H

Probab=95.88  E-value=0.0072  Score=59.63  Aligned_cols=69  Identities=26%  Similarity=0.388  Sum_probs=52.4

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eeec------------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSID------------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l~------------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.|.|  .|.|.|.+.   .   .++.            ...+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (256)
T 1nqb_A           10 ELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE   89 (256)
T ss_dssp             EEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh
Confidence            5677999999999999886  689999752   1   1111            11367766542     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..|
T Consensus        90 DsG~Y~C~~~n~~g  103 (256)
T 1nqb_A           90 DSAVYYCARYDYYG  103 (256)
T ss_dssp             GCEEEEEEECCTTS
T ss_pred             hCEEEEEEEeeccC
Confidence            99999999998866

>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H

Probab=95.88  E-value=0.011  Score=58.12  Aligned_cols=82  Identities=16%  Similarity=0.313  Sum_probs=55.4

Q ss_pred             cccccCCCeeeeeecccCCCCC-----eeeccC---Ccee---ec-------CCCCceEEec---CCeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-----VYTWSK---GEVS---ID-------GSDGHYKLTL---DGVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-----~i~w~k---~~~~---l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|.|     .|.|.|   +..+   +.       ...+++....   ..+|.|.++...|+|
T Consensus       130 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG  209 (256)
T 1nqb_A          130 SLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG  209 (256)
T ss_dssp             EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             EEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCE
Confidence            3467789999999999999876     999976   2211   11       1134554432   236999999999999


Q ss_pred             eeeecCCCCCCcccccceeeeec
Q psy10163        408 IYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       408 ~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      .|.|.+.+...........|.|.
T Consensus       210 ~Y~C~a~~~~~~~fg~gt~l~V~  232 (256)
T 1nqb_A          210 VYYCFQGSHVPYTFGGGTKLEIK  232 (256)
T ss_dssp             EEEEEECSSSSCEECCCEEEEEC
T ss_pred             EEEEEEccCCceEECCCEEEEEE
Confidence            99999987543323333445454

>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1

Probab=95.87  E-value=0.0062  Score=52.51  Aligned_cols=82  Identities=21%  Similarity=0.208  Sum_probs=53.2

Q ss_pred             cccccCCCeeeeeecccC----CCCCeeeccCCce-------eecC------------CCCceEEe-----cCCeEEEee
Q psy10163        349 TVEAEEGNFVTLRCIAIG----YPIPVYTWSKGEV-------SIDG------------SDGHYKLT-----LDGVLQIVG  400 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G----~P~P~i~w~k~~~-------~l~~------------~~g~~~~~-----~~gsl~I~~  400 (615)
                      .+.+.+|+.++|.|....    .+.+.|.|.+...       ++..            -.+++.+.     .+.+|.|.+
T Consensus         8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~   87 (124)
T 1neu_A            8 EVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHN   87 (124)
T ss_dssp             EEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECS
T ss_pred             eEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEcc
Confidence            467889999999998753    3577899965221       1110            13555544     246899999


Q ss_pred             ccccCCceeeecCCCCCCc-ccccceeeeec
Q psy10163        401 LVRQDAGIYVCVAANGIGD-PIRKEFNVIVR  430 (615)
Q Consensus       401 ~~~~DsG~Y~C~a~n~~G~-p~~~~~~l~V~  430 (615)
                      +...|+|.|.|...+..+. .....+.|.|.
T Consensus        88 v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~  118 (124)
T 1neu_A           88 LDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF  118 (124)
T ss_dssp             CCGGGCEEEEEEEEC----CCEEEEEEEEEE
T ss_pred             CChhhCEEEEEEEEcCCCCcCcEeeEEEEEe
Confidence            9999999999998876553 12344555553

>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A

Probab=95.84  E-value=0.0056  Score=58.31  Aligned_cols=82  Identities=27%  Similarity=0.336  Sum_probs=58.1

Q ss_pred             CcccccCCCeeeeeecccCCCC-CeeeccCC--c----eeec----CC--CCceE----------EecCCeEEEeecccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPI-PVYTWSKG--E----VSID----GS--DGHYK----------LTLDGVLQIVGLVRQ  404 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~-P~i~w~k~--~----~~l~----~~--~g~~~----------~~~~gsl~I~~~~~~  404 (615)
                      ..+.+.+|+.++|.|.+.+.|. +.|.|.+.  .    .+..    ..  .++..          +..++.|.|.++...
T Consensus         8 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~   87 (231)
T 2pet_A            8 PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVG   87 (231)
T ss_dssp             SEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGG
T ss_pred             CcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcc
Confidence            3567889999999999999995 99999742  1    1110    00  12222          566678999999999


Q ss_pred             CCceeeecCCCCC-Ccccccceeeeec
Q psy10163        405 DAGIYVCVAANGI-GDPIRKEFNVIVR  430 (615)
Q Consensus       405 DsG~Y~C~a~n~~-G~p~~~~~~l~V~  430 (615)
                      |+|.|.|.+.+.. +. ....+.|.|.
T Consensus        88 D~G~Y~C~~~~~~~~~-~~~~~~l~V~  113 (231)
T 2pet_A           88 DERDYVCVVRAGAAGT-AEATARLNVF  113 (231)
T ss_dssp             GCEEEEEEEECGGGCE-EEEEEEEEEE
T ss_pred             cCceEEEEEEecCCCc-eEEEEEEEEE
Confidence            9999999998876 43 4445555553

>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L

Probab=95.84  E-value=0.015  Score=52.85  Aligned_cols=68  Identities=22%  Similarity=0.275  Sum_probs=50.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeecC-------CCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+.      ..++..       ..+++.+..   ..+|+|.++...|+|.|.|.
T Consensus        25 ~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~  104 (146)
T 2yc1_B           25 TLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFAIYYCQ  104 (146)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred             EEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCEEEEEE
Confidence            46688999999999998888889999542      222211       135665542   23699999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus       105 ~~~~  108 (146)
T 2yc1_B          105 QYRY  108 (146)
T ss_dssp             ECSS
T ss_pred             EecC
Confidence            8764

>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}

Probab=95.81  E-value=0.0074  Score=57.24  Aligned_cols=79  Identities=19%  Similarity=0.155  Sum_probs=54.9

Q ss_pred             ccccCCCeeeeeecccCCCC-----CeeeccCCce---ee---------cCCCCceEEec------CCeEEEeeccccCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI-----PVYTWSKGEV---SI---------DGSDGHYKLTL------DGVLQIVGLVRQDA  406 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~-----P~i~w~k~~~---~l---------~~~~g~~~~~~------~gsl~I~~~~~~Ds  406 (615)
                      +.+.+|+.++|.|.+.+.|.     +.|.|.+...   ++         ..-.++..+..      +++|.|.++...|+
T Consensus         5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~   84 (222)
T 4i0k_A            5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE   84 (222)
T ss_dssp             CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred             EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence            45778999999999998865     7899975321   11         11235555554      56899999999999


Q ss_pred             ceeeecCCCCCCcccccceeeeec
Q psy10163        407 GIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       407 G~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      |.|.|.+.+...  ....+.|.|.
T Consensus        85 G~Y~C~~~~~~~--~~~~~~l~V~  106 (222)
T 4i0k_A           85 GSYTCFVSIQDF--DSAAVSLQVA  106 (222)
T ss_dssp             SCEEEEEEECCC--CCCCCCCCCC
T ss_pred             EEEEEEEEeCCC--ceEEEEEEEE
Confidence            999999886522  2334444454

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=95.81  E-value=0.015  Score=63.23  Aligned_cols=70  Identities=13%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC-CceeecCCCCceEEecCCeEEEeeccccCCc-eeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG-IYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k-~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG-~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+ +...+. ...++.+...+.|.|..+...|+| .|.|.+.+..+.
T Consensus       123 ~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~-~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~  194 (524)
T 2ec8_A          123 SLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLP-KDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKS  194 (524)
T ss_dssp             CCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCC-SSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----C
T ss_pred             ceEEEcCCeEEEECcCCCCccceEEEEccCCcCcC-CCCceeECCCccEEEeccchhhCCceEEEEEEECCce
Confidence            3556789999999999998889999955 433332 345677777889999999999999 999999887654

>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A

Probab=95.80  E-value=0.0081  Score=56.61  Aligned_cols=69  Identities=23%  Similarity=0.312  Sum_probs=51.4

Q ss_pred             cccccCCCeeeeeecccCC-------CCCeeeccCCce------ee----------cCCCCceEEecC-----CeEEEee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-------PIPVYTWSKGEV------SI----------DGSDGHYKLTLD-----GVLQIVG  400 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-------P~P~i~w~k~~~------~l----------~~~~g~~~~~~~-----gsl~I~~  400 (615)
                      .+.+.+|+.++|.|.+.+.       +.+.|.|.++..      ++          ....+++.+..+     .+|.|.+
T Consensus         9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~   88 (214)
T 2zg1_A            9 SVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGD   88 (214)
T ss_dssp             EEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred             EEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEcc
Confidence            4677899999999998754       688999976422      11          112366666542     3799999


Q ss_pred             ccccCCceeeecCCCCC
Q psy10163        401 LVRQDAGIYVCVAANGI  417 (615)
Q Consensus       401 ~~~~DsG~Y~C~a~n~~  417 (615)
                      +...|+|.|.|.+.+..
T Consensus        89 v~~~D~G~Y~C~~~~~~  105 (214)
T 2zg1_A           89 ARMEDTGSYFFRVERGR  105 (214)
T ss_dssp             CCGGGCEEEEEEEEETT
T ss_pred             CCHhhCceEEEEEEcCC
Confidence            99999999999988765

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=95.80  E-value=0.0059  Score=60.32  Aligned_cols=81  Identities=19%  Similarity=0.191  Sum_probs=60.9

Q ss_pred             CcccccCCCeeeeeecccCCCCCe-eeccC-CceeecCCCCceEEecCCeEEEeeccccCCceeeecCC-CCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPV-YTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA-NGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~-i~w~k-~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~-n~~G~p~~~~  424 (615)
                      ..+.+.+|+.++|.|.+.+.|.+. |.|.+ +...+ ....++.+...+.|.|..+...|+|.|.|.+. +..+. ....
T Consensus        97 ~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~-~~~~  174 (289)
T 3ejj_X           97 QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQV-LRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRES-TSTG  174 (289)
T ss_dssp             SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEEC-CTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEE-ECCC
T ss_pred             ceEEEecCCceEeEEEccCCCcceEEEEEecCCeec-CCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCcc-cccc
Confidence            345677899999999999988776 99964 33333 34566777778899999999999999999998 44443 4555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus       175 ~~l~V~  180 (289)
T 3ejj_X          175 IWLKVN  180 (289)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            566664

>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...

Probab=95.79  E-value=0.01  Score=56.13  Aligned_cols=68  Identities=16%  Similarity=0.264  Sum_probs=50.5

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCCc---e---eec-----------CCCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKGE---V---SID-----------GSDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~---~---~l~-----------~~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+..   .   ++.           ...+++.+..+     .+|.|.++...|
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D   89 (210)
T 3d9a_H           10 SLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED   89 (210)
T ss_dssp             SEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred             EEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence            4577899999999999886  4899996521   1   110           11366666532     289999999999


Q ss_pred             CceeeecCCCCC
Q psy10163        406 AGIYVCVAANGI  417 (615)
Q Consensus       406 sG~Y~C~a~n~~  417 (615)
                      +|.|.|.+.+..
T Consensus        90 ~G~Y~C~~~~~~  101 (210)
T 3d9a_H           90 TATYYCANWDGD  101 (210)
T ss_dssp             CEEEEEEETTSS
T ss_pred             CEEEEEEEecCc
Confidence            999999998863

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A

Probab=95.79  E-value=0.0058  Score=57.90  Aligned_cols=80  Identities=26%  Similarity=0.323  Sum_probs=55.5

Q ss_pred             cccccCCCeeeeeecccCCCC-----CeeeccCCceee----c----------CCCCceEEecC------CeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI-----PVYTWSKGEVSI----D----------GSDGHYKLTLD------GVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~-----P~i~w~k~~~~l----~----------~~~g~~~~~~~------gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|.     +.|.|.++...+    +          .-.++..+..+      .+|.|.++..
T Consensus        10 ~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~   89 (222)
T 3sbw_C           10 LYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKL   89 (222)
T ss_dssp             EEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCG
T ss_pred             cEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccc
Confidence            356778999999999988874     489997643111    0          01245555433      3799999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeec
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      .|+|.|.|.+.+ .+. ....+.|.|.
T Consensus        90 ~D~G~Y~C~~~~-~~~-~~~~~~l~V~  114 (222)
T 3sbw_C           90 QDAGVYRCMISY-GGA-DYKRITVKVN  114 (222)
T ss_dssp             GGCEEEEEEEES-SSE-EEEEEEEEEE
T ss_pred             ccCeEEEEEEEe-CCC-ceeEEEEEEE
Confidence            999999999988 343 3445556664

>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A

Probab=95.78  E-value=0.012  Score=57.53  Aligned_cols=82  Identities=16%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             cccccCCCeeeeeecccCCCCC----eeeccCC---c---eeec-------CCCCceEEecC---CeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP----VYTWSKG---E---VSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P----~i~w~k~---~---~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.|.|    .|.|.+.   .   .++.       ...+++.....   .+|.|.++...|+|.
T Consensus       142 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~  221 (253)
T 3uzq_A          142 SLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVAT  221 (253)
T ss_dssp             EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred             eEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEE
Confidence            3567899999999999999987    9999651   1   1111       11245543322   259999999999999


Q ss_pred             eeecCCCCCCcccccceeeeec
Q psy10163        409 YVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       409 Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      |.|.+.+..+.-......|.|.
T Consensus       222 Y~C~~~n~~~~~fg~gt~l~v~  243 (253)
T 3uzq_A          222 YFCQRSNEVPWTFGGGTKLEIK  243 (253)
T ss_dssp             EEEEECSSSSCCBCCCEEEEEC
T ss_pred             EEEEEccCCCcEECCCEEEEEc
Confidence            9999988655433334445453

>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...

Probab=95.77  E-value=0.0061  Score=57.55  Aligned_cols=80  Identities=19%  Similarity=0.335  Sum_probs=55.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---Cce---eec-------CCCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---GEV---SID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~~~---~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.  |.+.|.|.+   +..   ++.       ...+++.+..   ..+|.|.++...|+|.|.|.
T Consensus         9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   86 (211)
T 3tv3_L            9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG   86 (211)
T ss_dssp             EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred             eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence            56788999999999998  899999975   211   111       0224555332   33799999999999999999


Q ss_pred             CCCCCC-cccccceeeeec
Q psy10163        413 AANGIG-DPIRKEFNVIVR  430 (615)
Q Consensus       413 a~n~~G-~p~~~~~~l~V~  430 (615)
                      +.+..+ ........|.|.
T Consensus        87 ~~~~~~~~~~~~~~~l~V~  105 (211)
T 3tv3_L           87 SLVGNWDVIFGGGTKLTVL  105 (211)
T ss_dssp             EEETTTEEEECCCEEEEEC
T ss_pred             EecCCCceeECCCceEEEe
Confidence            998876 223344445453

>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}

Probab=95.77  E-value=0.0052  Score=52.32  Aligned_cols=67  Identities=24%  Similarity=0.421  Sum_probs=49.0

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCCc----e-eecCCCCceEEec-----CCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKGE----V-SIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~----~-~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.+  .+.|.|.+..    . .+-...+++.+..     ..+|.|.++...|+|.|.|.+.+
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~   87 (108)
T 2coq_A            9 IATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR   87 (108)
T ss_dssp             EEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred             eEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence            35678999999999998764  6789996531    1 1222346665432     33799999999999999999876

>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}

Probab=95.75  E-value=0.0054  Score=60.29  Aligned_cols=70  Identities=19%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec--------CCCCceEEe-----cCCeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID--------GSDGHYKLT-----LDGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~--------~~~g~~~~~-----~~gsl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.      ..++.        ...+++.+.     ...+|+|.++...|+|.|
T Consensus        12 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y   91 (256)
T 3tf7_C           12 RVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVY   91 (256)
T ss_dssp             EEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEE
T ss_pred             eEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEE
Confidence            46788999999999999999999999541      11111        113455542     233699999999999999


Q ss_pred             eecCCCCCC
Q psy10163        410 VCVAANGIG  418 (615)
Q Consensus       410 ~C~a~n~~G  418 (615)
                      .|.+.+..+
T Consensus        92 ~C~~~~~~~  100 (256)
T 3tf7_C           92 FCAVSAKGT  100 (256)
T ss_dssp             EEEEECTTC
T ss_pred             EEEEecCCC
Confidence            999988654

>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*

Probab=94.74  E-value=0.0016  Score=55.72  Aligned_cols=68  Identities=21%  Similarity=0.373  Sum_probs=50.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCce------ee-------cCCCCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV------SI-------DGSDGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~------~l-------~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+...      ++       ....+++.+..     ..+|.|.++...|+|.|.
T Consensus         8 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~   87 (110)
T 1u3h_A            8 SLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYF   87 (110)
Confidence            3567799999999999888889999966321      11       11245665543     247999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+.+.
T Consensus        88 C~~~~~   93 (110)
T 1u3h_A           88 CAASAN   93 (110)
Confidence            998764

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*

Probab=95.75  E-value=0.006  Score=59.73  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=51.5

Q ss_pred             CcccccCCCeeeeeeccc---CCCCCeeeccCCcee-------ec-CC---------CCceEEe-----cCCeEEEeecc
Q psy10163        348 PTVEAEEGNFVTLRCIAI---GYPIPVYTWSKGEVS-------ID-GS---------DGHYKLT-----LDGVLQIVGLV  402 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~---G~P~P~i~w~k~~~~-------l~-~~---------~g~~~~~-----~~gsl~I~~~~  402 (615)
                      ..+.+.+|+.++|.|.+.   +.|.+.|.|.+....       +. ..         .++..+.     .+++|.|.++.
T Consensus        13 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~   92 (268)
T 3mj6_A           13 PQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQ   92 (268)
T ss_dssp             CEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCC
T ss_pred             CceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCC
Confidence            346788999999999988   888999999762210       00 00         1444432     22689999999


Q ss_pred             ccCCceeeecCCCCCC
Q psy10163        403 RQDAGIYVCVAANGIG  418 (615)
Q Consensus       403 ~~DsG~Y~C~a~n~~G  418 (615)
                      ..|+|.|.|.+.+..+
T Consensus        93 ~~D~G~Y~C~~~~~~~  108 (268)
T 3mj6_A           93 KADEGIYTCEIRLKNE  108 (268)
T ss_dssp             GGGCEEEEEEEEETTC
T ss_pred             HhHCEEEEEEEEecCC
Confidence            9999999999987644

>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}

Probab=95.75  E-value=0.0078  Score=52.87  Aligned_cols=83  Identities=18%  Similarity=0.203  Sum_probs=55.5

Q ss_pred             cccccCCCeeeeeecccCCC----CCeeeccCC------ceeecC-------CCCceEEec---CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP----IPVYTWSKG------EVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~------~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.+    .+.|.|.+.      ..++..       ..+++.+..   ..+|+|.++...|+|.
T Consensus        10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~DsG~   89 (126)
T 4ffy_L           10 SLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAAT   89 (126)
T ss_dssp             EEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred             eEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHCEE
Confidence            36788999999999999887    678999652      222211       134555432   2369999999999999


Q ss_pred             eeecCCCCCCcccccceeeeecc
Q psy10163        409 YVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       409 Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      |.|.+.+....-......|.|.+
T Consensus        90 Y~C~~~~~~~~~fg~gT~L~V~~  112 (126)
T 4ffy_L           90 YYCQQNNEDPYTFGGGTKLEIKG  112 (126)
T ss_dssp             EEEEECSSSSCEECCCEEEEEEC
T ss_pred             EEEEEecCCCcEECCCEEEEEec
Confidence            99998775332222334455543

>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C

Probab=95.74  E-value=0.011  Score=58.67  Aligned_cols=82  Identities=15%  Similarity=0.220  Sum_probs=57.1

Q ss_pred             cccccCCCeeeeeecccCCC------CCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP------IPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P------~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+.|      .+.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+
T Consensus        14 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds   93 (264)
T 2gjj_A           14 SLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDL   93 (264)
T ss_dssp             EEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             eEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHC
Confidence            45778999999999999998      789999652      11221       11356665432   3799999999999


Q ss_pred             ceeeecCCCCCCcccccceeeeec
Q psy10163        407 GIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       407 G~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      |.|.|.+.+..+........|.|.
T Consensus        94 G~Y~C~~~~~~~~~~~~~~~L~V~  117 (264)
T 2gjj_A           94 AVYYCQQYSNYPWTFGGGTRLEIK  117 (264)
T ss_dssp             EEEEEEECSSSSCEECCCEEEEEE
T ss_pred             EEEEEEEecCCccEecCCEEEEEE
Confidence            999999988754322233445553

>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}

Probab=95.73  E-value=0.0063  Score=53.22  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=56.2

Q ss_pred             ccccCCCeeeeeecc-cCCCCCeeeccCCc--eeec--C---------CCCceEEe-cCCeEEEeeccccCCceeeecCC
Q psy10163        350 VEAEEGNFVTLRCIA-IGYPIPVYTWSKGE--VSID--G---------SDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       350 v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~--~~l~--~---------~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      +.+.+|+.++|.|.. ...+...|.|.+..  .++.  .         =.++..+. .+++|.|.++...|+|.|.|...
T Consensus        14 v~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c~v~   93 (121)
T 2edo_A           14 MTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVL   93 (121)
T ss_dssp             CEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEEEEE
T ss_pred             EEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEEEEE
Confidence            567799999999987 45556789997632  2211  0         12455555 56799999999999999999876


Q ss_pred             CCCCcccccceeeeecc
Q psy10163        415 NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~~  431 (615)
                      +..+......+.|.|.+
T Consensus        94 ~~~~~~~~~~~~L~V~~  110 (121)
T 2edo_A           94 KKTGNEQEWKIKLQVLD  110 (121)
T ss_dssp             ETTTEEEECCEECEEEC
T ss_pred             cCCCcEEEEEEEEEEEC
Confidence            55443234555666643

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=95.70  E-value=0.0074  Score=61.22  Aligned_cols=71  Identities=21%  Similarity=0.355  Sum_probs=52.7

Q ss_pred             CcccccCCCeeeeeecccCC-CCCeeeccCCce-----eecC---CCCceEEe--------cCCeEEEeeccccCCceee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEV-----SIDG---SDGHYKLT--------LDGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~-----~l~~---~~g~~~~~--------~~gsl~I~~~~~~DsG~Y~  410 (615)
                      ..+.+.+|+.++|.|.+.+. |.|.|.|.++..     ++..   ..+++.+.        ...+|.|.++...|+|.|.
T Consensus        11 ~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~   90 (327)
T 2wng_A           11 KSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY   90 (327)
T ss_dssp             SEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEE
T ss_pred             CceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEE
Confidence            34678899999999999998 999999976421     1111   12244432        3447999999999999999


Q ss_pred             ecCCCCCC
Q psy10163        411 CVAANGIG  418 (615)
Q Consensus       411 C~a~n~~G  418 (615)
                      |.+.|..+
T Consensus        91 C~a~n~~~   98 (327)
T 2wng_A           91 CVKFRKGS   98 (327)
T ss_dssp             EEEEESST
T ss_pred             EEeecCCC
Confidence            99887654

>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A

Probab=95.67  E-value=0.0082  Score=57.45  Aligned_cols=70  Identities=21%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             ccccCCCeeeeeecccCCCCC---eeeccCCce---e---ecC----------CCCceEEec------CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP---VYTWSKGEV---S---IDG----------SDGHYKLTL------DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P---~i~w~k~~~---~---l~~----------~~g~~~~~~------~gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|.+   .|.|.|+..   +   .++          -.++.....      ..+|.|.++...
T Consensus        14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~   93 (226)
T 4f80_A           14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS   93 (226)
T ss_dssp             EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred             EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence            567889999999999887766   699976321   0   010          012333222      237999999999


Q ss_pred             CCceeeecCCCCCCc
Q psy10163        405 DAGIYVCVAANGIGD  419 (615)
Q Consensus       405 DsG~Y~C~a~n~~G~  419 (615)
                      |+|.|.|.+.|+.|.
T Consensus        94 D~G~Y~C~a~n~~~~  108 (226)
T 4f80_A           94 DSGKYLCYFQDGDFY  108 (226)
T ss_dssp             GCEEEEEEEEETTEE
T ss_pred             HCeeEEEEEECCCcE
Confidence            999999999998775

>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*

Probab=95.67  E-value=0.012  Score=55.91  Aligned_cols=69  Identities=25%  Similarity=0.523  Sum_probs=51.6

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCCc------eeec-----CC---------CCceEEecC-----CeEEEeecc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSID-----GS---------DGHYKLTLD-----GVLQIVGLV  402 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l~-----~~---------~g~~~~~~~-----gsl~I~~~~  402 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+..      .++.     ..         .+++.+..+     .+|.|.++.
T Consensus        10 ~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~   89 (220)
T 1pz5_B           10 GLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLR   89 (220)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred             EEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCC
Confidence            5677899999999999887  7899996532      1111     11         367766532     289999999


Q ss_pred             ccCCceeeecCCCCCC
Q psy10163        403 RQDAGIYVCVAANGIG  418 (615)
Q Consensus       403 ~~DsG~Y~C~a~n~~G  418 (615)
                      ..|+|.|.|.+.+..+
T Consensus        90 ~~D~G~Y~C~~~~~~~  105 (220)
T 1pz5_B           90 AEDTGIYYCTRGGAVG  105 (220)
T ss_dssp             GGGCEEEEEEEECTTS
T ss_pred             HHHCEEEEEEEecCCc
Confidence            9999999999988653

>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=95.67  E-value=0.0051  Score=57.43  Aligned_cols=80  Identities=14%  Similarity=0.026  Sum_probs=52.6

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEecCCeEEEeeccccCCceeeecCCCCCCcc-cccceeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDP-IRKEFNVI  428 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p-~~~~~~l~  428 (615)
                      .+.+|+.++|.|.+.+. .+.+.|.|+...+... .........+.|.|.++...|+|.|.|.+.+..+.. ....+.|.
T Consensus        14 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~   92 (188)
T 1oll_A           14 MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV   92 (188)
T ss_dssp             EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred             cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEE
Confidence            56789999999998865 4688897754333211 111112234579999999999999999998764431 23445555


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        93 V~~   95 (188)
T 1oll_A           93 VTE   95 (188)
T ss_dssp             EES
T ss_pred             ecc
Confidence            543

>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A

Probab=95.66  E-value=0.01  Score=52.13  Aligned_cols=68  Identities=28%  Similarity=0.492  Sum_probs=48.8

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCc----eee-cCCC---CceEEe--------cCCeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGE----VSI-DGSD---GHYKLT--------LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~----~~l-~~~~---g~~~~~--------~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+. |.+.|.|.+..    .++ ....   +++...        ...+|.|.++...|+|.|.|
T Consensus        12 ~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   91 (127)
T 2jju_A           12 SVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC   91 (127)
T ss_dssp             EEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEE
T ss_pred             eEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEE
Confidence            4678899999999998876 67899996532    122 2111   344321        24579999999999999999


Q ss_pred             cCCCC
Q psy10163        412 VAANG  416 (615)
Q Consensus       412 ~a~n~  416 (615)
                      .+.+.
T Consensus        92 ~~~~~   96 (127)
T 2jju_A           92 VKFRK   96 (127)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            97764

>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N

Probab=95.66  E-value=0.012  Score=50.61  Aligned_cols=67  Identities=24%  Similarity=0.382  Sum_probs=49.0

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCCc---e--eecCCCCceEEec-----CCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKGE---V--SIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~---~--~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.+  .+.|.|.+..   .  ++-...+++.+..     ..+|+|.++...|+|.|.|.+.+
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~   87 (113)
T 1sq2_N            9 SVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV   87 (113)
T ss_dssp             EEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred             cEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence            45678999999999998776  5789995421   1  1112346665442     23799999999999999999876

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=95.63  E-value=0.014  Score=65.25  Aligned_cols=80  Identities=20%  Similarity=0.317  Sum_probs=60.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec-CCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.+ |.|.|.|.++...+.. ..++.+.. .+.|.|.++...|+|.|.|.+.|..|......+.|
T Consensus       476 ~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l  553 (642)
T 1e07_A          476 SKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPV-SPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTL  553 (642)
T ss_pred             ceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCC-CCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEE
Confidence            345678999999999995 8899999876555432 23444443 45899999999999999999999998744445666


Q ss_pred             eec
Q psy10163        428 IVR  430 (615)
Q Consensus       428 ~V~  430 (615)
                      .|.
T Consensus       554 ~V~  556 (642)
T 1e07_A          554 DVL  556 (642)
T ss_pred             EEE
Confidence            664

>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...

Probab=95.63  E-value=0.017  Score=55.11  Aligned_cols=69  Identities=19%  Similarity=0.320  Sum_probs=51.2

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eee----c----------CCCCceEEecC-----CeEEEeecc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI----D----------GSDGHYKLTLD-----GVLQIVGLV  402 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l----~----------~~~g~~~~~~~-----gsl~I~~~~  402 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++    .          .-.+++.+..+     .+|.|.++.
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~   89 (222)
T 1q9r_B           10 GLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR   89 (222)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred             eeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC
Confidence            4577899999999999876  789999642   1   111    0          01356666542     389999999


Q ss_pred             ccCCceeeecCCCCCC
Q psy10163        403 RQDAGIYVCVAANGIG  418 (615)
Q Consensus       403 ~~DsG~Y~C~a~n~~G  418 (615)
                      ..|+|.|.|.+.+..+
T Consensus        90 ~~D~G~Y~C~~~~~~~  105 (222)
T 1q9r_B           90 AEDSATYYCARDHDGY  105 (222)
T ss_dssp             GGGCEEEEEEECCCSS
T ss_pred             cccCeEEEEEEeccCC
Confidence            9999999999988764

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=95.62  E-value=0.0083  Score=59.33  Aligned_cols=81  Identities=17%  Similarity=0.154  Sum_probs=55.7

Q ss_pred             cccCCCeeeeeecccCCCC-CeeeccCCceeecCCCC-ce---EEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        351 EAEEGNFVTLRCIAIGYPI-PVYTWSKGEVSIDGSDG-HY---KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~-P~i~w~k~~~~l~~~~g-~~---~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+|+.++|.|.+.+.|. +.+.|.++...+..... ++   .....+.|.|.++...|+|.|.|.+.|..|. ....+
T Consensus       197 ~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~  275 (292)
T 4dkd_C          197 VRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK-HSTSM  275 (292)
T ss_dssp             CCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE-EEEEE
T ss_pred             eEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC-ceeEE
Confidence            4458999999999998775 46788765433321111 00   0113347999999999999999999999998 66777


Q ss_pred             eeeeccc
Q psy10163        426 NVIVRGN  432 (615)
Q Consensus       426 ~l~V~~~  432 (615)
                      .|.|.+.
T Consensus       276 ~l~V~~~  282 (292)
T 4dkd_C          276 FFRVVES  282 (292)
T ss_dssp             EECC---
T ss_pred             EEEEeeC
Confidence            7777543

>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*

Probab=95.62  E-value=0.0058  Score=59.39  Aligned_cols=82  Identities=17%  Similarity=0.121  Sum_probs=55.4

Q ss_pred             cccccCCCeeeeeecccCCCCCe-----eeccCCce-------eecCCCC-------ceEE------ecCCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPV-----YTWSKGEV-------SIDGSDG-------HYKL------TLDGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~-----i~w~k~~~-------~l~~~~g-------~~~~------~~~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.|.|.|.     |.|.+...       ++....+       +..+      ..+.+|.|.++..
T Consensus        12 ~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~   91 (248)
T 3pv7_A           12 TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQL   91 (248)
T ss_dssp             EEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCG
T ss_pred             CeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCH
Confidence            45677899999999999999886     99976311       1110001       1111      1123599999999


Q ss_pred             cCCceeeecCCCCCCcccccceeeeecc
Q psy10163        404 QDAGIYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|+|.|.|.+.+..+. ....+.|.|..
T Consensus        92 ~D~G~Y~C~~~~~~~~-~~~~~~L~V~~  118 (248)
T 3pv7_A           92 EEAGEYRCEVVVTPLK-AQGTVQLEVVA  118 (248)
T ss_dssp             GGCEEEEEEEEETTEE-EEEEEEEEEEB
T ss_pred             HHCeEEEEEEEeCCcc-ceeEEEEEEec
Confidence            9999999999887664 44555666644

>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}

Probab=95.62  E-value=0.0042  Score=52.84  Aligned_cols=78  Identities=14%  Similarity=0.049  Sum_probs=50.1

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEE-ecCCeEEEeeccccCCceeeecCCCCC---Cccccccee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCVAANGI---GDPIRKEFN  426 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~---G~p~~~~~~  426 (615)
                      .+.+|+.++|.|.+.+.+ +.+.|.|+...+..  ++... .....|.|..+...|+|.|.|.+.+..   .......+.
T Consensus        15 ~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~--~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~~~~~s~~Sdpl~   91 (105)
T 2vsd_A           15 GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFD--KEKDKEQDAAEFSFAVTNLEDAGTYQCRYQVSEPLWTSNQSDPVE   91 (105)
T ss_dssp             SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEE--EEECTTCSEEEEEEECCSGGGCEEEEEEEEEETTEEECCCCCCEE
T ss_pred             CcCcCCCEEEEEEcCCCC-cEEEEEECCcccee--eeccCCCCEEEEEECCCCHHHCeEEEEEEEcCCCCcccCCCCCEE
Confidence            467899999999998764 56778764332210  01100 122368899999999999999988753   222344466


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|.+
T Consensus        92 L~V~~   96 (105)
T 2vsd_A           92 LVLTI   96 (105)
T ss_dssp             ECCC-
T ss_pred             EEEEE
Confidence            66644

>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}

Probab=95.61  E-value=0.013  Score=49.84  Aligned_cols=69  Identities=17%  Similarity=0.270  Sum_probs=49.2

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccCCc------eeecC------CCCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSKGE------VSIDG------SDGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k~~------~~l~~------~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.. .+.|.|.+..      .++..      ..+++.+..     ..+|+|.++...|+|.|.
T Consensus         5 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~   84 (110)
T 2q87_A            5 TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYW   84 (110)
T ss_dssp             EEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEE
T ss_pred             EEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEE
Confidence            35678999999999987654 4689996532      12211      135665542     137999999999999999


Q ss_pred             ecCCCCC
Q psy10163        411 CVAANGI  417 (615)
Q Consensus       411 C~a~n~~  417 (615)
                      |.+.+..
T Consensus        85 C~~~~~~   91 (110)
T 2q87_A           85 CGVDTPW   91 (110)
T ss_dssp             EEEECTT
T ss_pred             EEEecCc
Confidence            9987764

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=95.59  E-value=0.011  Score=57.28  Aligned_cols=62  Identities=19%  Similarity=0.246  Sum_probs=50.9

Q ss_pred             ccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.++|.|.+.+.|.| .|.|.++...+..        ....|.|..+...|+|.|.|.+.+..+.
T Consensus        11 ~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~--------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s   73 (262)
T 3rjd_A           11 VSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT--------STPSYRITSASVNDSGEYRCQRGLSGRS   73 (262)
T ss_dssp             SEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEESSSCCC
T ss_pred             EEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec--------cCCeEEEecCCcccCeEEEEEEecCCcc
Confidence            457789999999999999998 9999876544432        2567889999999999999999887554

>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*

Probab=95.59  E-value=0.01  Score=56.58  Aligned_cols=57  Identities=21%  Similarity=0.245  Sum_probs=44.2

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      +.+|+.++|.|.+   |.|.|.|.|+...+...     ....++|.|..+...|+|.|.|.+.+.
T Consensus        15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~   71 (204)
T 1sy6_A           15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQN   71 (204)
T ss_dssp             CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSS
T ss_pred             ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCC
Confidence            4578999999998   88999998765444211     123467999999999999999997653

>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...

Probab=95.55  E-value=0.0085  Score=57.86  Aligned_cols=68  Identities=25%  Similarity=0.366  Sum_probs=50.9

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCC---c---eee--cC----------CCCceEEec-----CCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI--DG----------SDGHYKLTL-----DGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l--~~----------~~g~~~~~~-----~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++  ..          -.+++.+..     +.+|.|.++..
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~   88 (227)
T 1mju_H            9 AELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTS   88 (227)
T ss_dssp             EEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred             CeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCc
Confidence            35678999999999999887  789999542   1   111  10          136776653     34899999999


Q ss_pred             cCCceeeecCCCC
Q psy10163        404 QDAGIYVCVAANG  416 (615)
Q Consensus       404 ~DsG~Y~C~a~n~  416 (615)
                      .|+|.|.|.+.+.
T Consensus        89 ~D~G~Y~C~~~~~  101 (227)
T 1mju_H           89 DDSAVYYCANKLG  101 (227)
T ss_dssp             GGCEEEEEEEEET
T ss_pred             ccCEEEEEEECCC
Confidence            9999999998875

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=95.54  E-value=0.014  Score=56.64  Aligned_cols=64  Identities=31%  Similarity=0.480  Sum_probs=47.5

Q ss_pred             ccccCCCeeeeeecccCCCC-Ce----eeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI-PV----YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~-P~----i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|+.++|.|.+.+.|. |.    +.|.++...+..      ......|.|..+...|+|.|.|.+.|..|.
T Consensus       180 ~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~  248 (262)
T 3rjd_A          180 SPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG------RNTSSEYQILTARREDSGLYWCEAATEDGN  248 (262)
T ss_dssp             SSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE------EESCCEEEESSCCGGGCEEEEEEEEETTSS
T ss_pred             eeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc------cCCCceEEEEEechhhCeEEEEEEEcccCc
Confidence            44678999999999999987 75    455554333321      123457899999999999999999999996

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=95.50  E-value=0.0092  Score=61.57  Aligned_cols=60  Identities=17%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+|+.++|.|.+.+.|.|.|.|.++..        -.......|.|..+...|+|.|.|.+.+..+
T Consensus       107 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~  166 (363)
T 1wio_A          107 HLLQGQSLTLTLESPPGSSPSVQCRSPRG--------KNIQGGKTLSVSQLELQDSGTWTCTVLQNQK  166 (363)
T ss_dssp             SEESBSCEEEEEECCTTCCCCEEEECSSS--------CEEEESSEEEECSBCGGGCEECEEEEEETTE
T ss_pred             EEecCCCEEEEEEcCCCCCCeEEEEcCCC--------cccccceEEEEeeCChhcCCEEEEEEecCCC
Confidence            35689999999999999999999987421        1234567899999999999999999887644

>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C

Probab=95.50  E-value=0.032  Score=47.63  Aligned_cols=68  Identities=16%  Similarity=0.266  Sum_probs=48.9

Q ss_pred             cccccCCCeeeeeecccCCC-----CCeeeccCC------ceeecC-------CCCceEEecC---CeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-----IPVYTWSKG------EVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-----~P~i~w~k~------~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.+     .+.|.|.+.      ..++..       ..+++.+...   .+|.|.++...|+|
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG   89 (113)
T 1dlf_L           10 SLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG   89 (113)
T ss_dssp             EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred             EEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHCE
Confidence            46788999999999998776     478999541      122211       1356654422   26999999999999


Q ss_pred             eeeecCCCC
Q psy10163        408 IYVCVAANG  416 (615)
Q Consensus       408 ~Y~C~a~n~  416 (615)
                      .|.|.+.+.
T Consensus        90 ~Y~C~~~~~   98 (113)
T 1dlf_L           90 VYFCSQSTH   98 (113)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEEecC
Confidence            999998764

>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2

Probab=95.49  E-value=0.0077  Score=56.87  Aligned_cols=68  Identities=21%  Similarity=0.379  Sum_probs=50.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC---cee---ec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG---EVS---ID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~---~~~---l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+.   ..+   +.       ...+++.+...   .+|.|.++...|+|.|.|.
T Consensus         8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   87 (212)
T 1nfd_E            8 SASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCL   87 (212)
T ss_dssp             EEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEE
T ss_pred             eEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEE
Confidence            35678999999999999999999999541   111   10       11356655433   3799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.++
T Consensus        88 ~~n~   91 (212)
T 1nfd_E           88 SSYG   91 (212)
T ss_dssp             EEET
T ss_pred             EEcc
Confidence            9863

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=95.48  E-value=0.0062  Score=61.84  Aligned_cols=77  Identities=14%  Similarity=0.160  Sum_probs=47.1

Q ss_pred             ccCCCeeeeeecccCCC-CC-eeeccCCceeecC-CCCceEEecCC------eEEEeeccccCCceeeecCCCCCCcccc
Q psy10163        352 AEEGNFVTLRCIAIGYP-IP-VYTWSKGEVSIDG-SDGHYKLTLDG------VLQIVGLVRQDAGIYVCVAANGIGDPIR  422 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P-~P-~i~w~k~~~~l~~-~~g~~~~~~~g------sl~I~~~~~~DsG~Y~C~a~n~~G~p~~  422 (615)
                      +.+|+.++|.|.+.|.| .+ .|.|.++...+.. .........++      .|.|..+...|+|.|.|.|.|..+.+..
T Consensus       232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s  311 (327)
T 2wng_A          232 VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVS  311 (327)
T ss_dssp             CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEE
T ss_pred             cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCch
Confidence            56899999999999964 44 7999875444421 11222223333      3666677788999999999999988666


Q ss_pred             cceeee
Q psy10163        423 KEFNVI  428 (615)
Q Consensus       423 ~~~~l~  428 (615)
                      ..+.+.
T Consensus       312 ~~~~~~  317 (327)
T 2wng_A          312 KSHDLK  317 (327)
T ss_dssp             EEEECC
T ss_pred             hheEEE
Confidence            554443

>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}

Probab=95.47  E-value=0.015  Score=56.86  Aligned_cols=70  Identities=20%  Similarity=0.301  Sum_probs=51.4

Q ss_pred             CCcccccCCCeeeeeecccCC--CCCeeeccCC------ceeec------------CCCCceEEecCC-----eEEEeec
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSID------------GSDGHYKLTLDG-----VLQIVGL  401 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l~------------~~~g~~~~~~~g-----sl~I~~~  401 (615)
                      ...+.+.+|+.++|.|.+.+.  |.+.|.|.+.      ..++.            ...+++.+..+.     +|+|.++
T Consensus        13 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v   92 (256)
T 3juy_B           13 SGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL   92 (256)
T ss_dssp             CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred             cCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCC
Confidence            345678899999999999884  7889999641      11111            113566665332     5999999


Q ss_pred             cccCCceeeecCCCC
Q psy10163        402 VRQDAGIYVCVAANG  416 (615)
Q Consensus       402 ~~~DsG~Y~C~a~n~  416 (615)
                      ...|+|.|.|.+.+.
T Consensus        93 ~~~DsG~Y~C~~~~~  107 (256)
T 3juy_B           93 RSADTAVYYCARVGE  107 (256)
T ss_dssp             CGGGCEEEEEEECCC
T ss_pred             CcccCEEEEEeEEec
Confidence            999999999999886

>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D

Probab=95.45  E-value=0.014  Score=57.19  Aligned_cols=67  Identities=25%  Similarity=0.414  Sum_probs=49.7

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceeec------------CCCCceEEecCC-----eEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSID------------GSDGHYKLTLDG-----VLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~------------~~~g~~~~~~~g-----sl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.      .+++.            ...+++.+..++     +|+|.++...
T Consensus        12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~   91 (256)
T 3umt_A           12 ELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE   91 (256)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             eEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence            5578999999999999877  789999531      11110            123566665433     4999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.+.
T Consensus        92 DsG~Y~C~~~~~  103 (256)
T 3umt_A           92 DSAVYYCARDDR  103 (256)
T ss_dssp             GCEEEEEEECCS
T ss_pred             cCEEEEEEEccC
Confidence            999999999876

>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A

Probab=95.43  E-value=0.014  Score=49.63  Aligned_cols=68  Identities=22%  Similarity=0.392  Sum_probs=48.8

Q ss_pred             cccccCCCeeeeeec-ccCCC-CCeeeccCCc----eeecC-------CCCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCI-AIGYP-IPVYTWSKGE----VSIDG-------SDGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~-~~G~P-~P~i~w~k~~----~~l~~-------~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|. +.+.+ .+.|.|.+..    .++..       ..+++.+..     ..+|+|.++...|+|.|.
T Consensus         9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~   88 (109)
T 1pew_A            9 SVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYY   88 (109)
T ss_dssp             EEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred             CEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEE
Confidence            467889999999999 87776 5889996432    22211       135666552     237999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+.+.
T Consensus        89 C~~~~~   94 (109)
T 1pew_A           89 CQSYDA   94 (109)
T ss_dssp             EEEEET
T ss_pred             EEEEeC
Confidence            987653

>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*

Probab=95.42  E-value=0.01  Score=57.61  Aligned_cols=67  Identities=25%  Similarity=0.417  Sum_probs=50.2

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCC------ceee------------cCCCCceEEecCC-----eEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSI------------DGSDGHYKLTLDG-----VLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l------------~~~~g~~~~~~~g-----sl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|  .|.|.|.++      ..++            ....+++.+..++     +|.|.++..
T Consensus       140 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~  219 (250)
T 3esu_F          140 PELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTS  219 (250)
T ss_dssp             CEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred             ceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCc
Confidence            35677899999999999887  889999653      1111            0112566665443     699999999


Q ss_pred             cCCceeeecCCC
Q psy10163        404 QDAGIYVCVAAN  415 (615)
Q Consensus       404 ~DsG~Y~C~a~n  415 (615)
                      .|+|.|.|.+.+
T Consensus       220 ~DsG~Y~C~~~~  231 (250)
T 3esu_F          220 VDSAVYFCARSG  231 (250)
T ss_dssp             GGCEEEEEEEEC
T ss_pred             ccCEEEEEEEec
Confidence            999999999886

>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}

Probab=95.41  E-value=0.014  Score=57.73  Aligned_cols=70  Identities=17%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             cccccCCCeeeeeecccCCC-----CCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-----IPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-----~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|     .+.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+|
T Consensus        24 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG  103 (268)
T 1x9q_A           24 SLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLG  103 (268)
T ss_dssp             EECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             eEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCE
Confidence            45678999999999999988     589999642      11221       11356665432   37999999999999


Q ss_pred             eeeecCCCCCC
Q psy10163        408 IYVCVAANGIG  418 (615)
Q Consensus       408 ~Y~C~a~n~~G  418 (615)
                      .|.|.+.+..+
T Consensus       104 ~Y~C~~~~~~~  114 (268)
T 1x9q_A          104 VYFCSQSTHVP  114 (268)
T ss_dssp             EEEEEECSSSS
T ss_pred             EEEEEEecCCC
Confidence            99999988754

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=95.38  E-value=0.031  Score=57.07  Aligned_cols=75  Identities=17%  Similarity=0.317  Sum_probs=52.1

Q ss_pred             ccccCCCeeeeeecccCCC-CCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.+.| .|.|.|.++...+.....++ ....+.|.|.++...|+|.|.|.+   .|. ....+.|.
T Consensus        16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~---~g~-~~~~~~L~   90 (325)
T 1n26_A           16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRW-AGMGRRLLLRSVQLHDSGNYSCYR---AGR-PAGTVHLL   90 (325)
T ss_dssp             EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEE-EEESSEEEECSCCGGGCEEEEEES---SSS-CSCEEEEE
T ss_pred             EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccccc-ccccceEEecccchhhCeEeEEEe---CCE-EeeeEEEE
Confidence            3446899999999999765 78999976433322222233 345688999999999999999994   343 34444444


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        91 V   91 (325)
T 1n26_A           91 V   91 (325)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}

Probab=95.38  E-value=0.02  Score=49.90  Aligned_cols=81  Identities=20%  Similarity=0.335  Sum_probs=51.8

Q ss_pred             CcccccCCCeeeeeecccCCCC---CeeeccCCc------ee-e-cCC---------CCceEEec------CCeEEEeec
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPI---PVYTWSKGE------VS-I-DGS---------DGHYKLTL------DGVLQIVGL  401 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~---P~i~w~k~~------~~-l-~~~---------~g~~~~~~------~gsl~I~~~  401 (615)
                      ..+.+.+|+.++|.|.+.+.+.   ..|.|.|..      .+ + ...         .++..+..      +.+|.|.++
T Consensus         8 ~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v   87 (123)
T 4gjt_B            8 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA   87 (123)
T ss_dssp             SEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESC
T ss_pred             CEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCC
Confidence            3467889999999999877664   357896521      11 1 111         13443332      347999999


Q ss_pred             cccCCceeeecCC-CCCCcccccceeeee
Q psy10163        402 VRQDAGIYVCVAA-NGIGDPIRKEFNVIV  429 (615)
Q Consensus       402 ~~~DsG~Y~C~a~-n~~G~p~~~~~~l~V  429 (615)
                      ...|+|.|.|... ...|. ....+.|.|
T Consensus        88 ~~~DsG~Y~C~v~t~~~g~-~~~~~~L~V  115 (123)
T 4gjt_B           88 VQADEGEYECRVSTFPAGS-FQARLRLRV  115 (123)
T ss_dssp             CSSSCSEEEEEEEESSSCE-EEEEEEEEC
T ss_pred             ChHHCEEEEEEEEECCCCe-EEeEEEEEE
Confidence            9999999999654 34443 444555555

>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2

Probab=95.36  E-value=0.016  Score=59.54  Aligned_cols=68  Identities=24%  Similarity=0.422  Sum_probs=50.9

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---ce---ee------------cCCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---EV---SI------------DGSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~~---~l------------~~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.+  .+.|.|.+.   ..   ++            ....+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (344)
T 1za6_B           10 EVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSE   89 (344)
T ss_dssp             EEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence            5678999999999999874  789999652   11   11            012367766542     47999999999


Q ss_pred             CCceeeecCCCCC
Q psy10163        405 DAGIYVCVAANGI  417 (615)
Q Consensus       405 DsG~Y~C~a~n~~  417 (615)
                      |+|.|.|.+.+..
T Consensus        90 D~G~Y~C~~~n~~  102 (344)
T 1za6_B           90 DTAVYFCTRSLNM  102 (344)
T ss_dssp             GCEEEEEEETTTT
T ss_pred             cCEEEEEEEecCc
Confidence            9999999998854

>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A

Probab=95.31  E-value=0.019  Score=48.54  Aligned_cols=71  Identities=20%  Similarity=0.267  Sum_probs=49.9

Q ss_pred             cccccCCCeeeeeecccCCCCC-----eeeccCCce--e--e-cC----------CCCceEEe-cCCeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-----VYTWSKGEV--S--I-DG----------SDGHYKLT-LDGVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-----~i~w~k~~~--~--l-~~----------~~g~~~~~-~~gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|.+     .|.|.+...  +  + ..          -.++..+. .+.+|.|.++...|+|
T Consensus         3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G   82 (110)
T 1ncn_A            3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKG   82 (110)
T ss_dssp             EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCE
T ss_pred             EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCE
Confidence            3567789999999999876654     399976321  1  1 11          02444443 3568999999999999


Q ss_pred             eeeecCCCCCCc
Q psy10163        408 IYVCVAANGIGD  419 (615)
Q Consensus       408 ~Y~C~a~n~~G~  419 (615)
                      .|.|...+..+.
T Consensus        83 ~Y~C~v~~~~~~   94 (110)
T 1ncn_A           83 LYQCIIHHKKPT   94 (110)
T ss_dssp             EEEEEEEEECSS
T ss_pred             EEEEEEEcCCCC
Confidence            999998766554

>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D

Probab=95.31  E-value=0.016  Score=56.10  Aligned_cols=66  Identities=20%  Similarity=0.357  Sum_probs=49.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC--------------ceeecCC---CCceEEecCC----eEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG--------------EVSIDGS---DGHYKLTLDG----VLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~--------------~~~l~~~---~g~~~~~~~g----sl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.| ..+.|.+.|.|.+.              ...+...   .+++.+..++    +|.|.++...|+|
T Consensus        11 ~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G   89 (245)
T 4ei6_B           11 HQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA   89 (245)
T ss_dssp             EEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred             eEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence            35678999999999 78899999999651              1111111   1677665432    7999999999999


Q ss_pred             eeeecCCC
Q psy10163        408 IYVCVAAN  415 (615)
Q Consensus       408 ~Y~C~a~n  415 (615)
                      .|.|.+.+
T Consensus        90 ~Y~C~~~~   97 (245)
T 4ei6_B           90 VYFCASSF   97 (245)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEcc
Confidence            99999875

>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H

Probab=95.26  E-value=0.011  Score=56.30  Aligned_cols=69  Identities=26%  Similarity=0.431  Sum_probs=51.4

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---cee--e---c----------CCCCceEEec-----CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---EVS--I---D----------GSDGHYKLTL-----DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~~~--l---~----------~~~g~~~~~~-----~gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.|.|  .+.|.|.+.   ..+  +   .          ...+++.+..     ..+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (219)
T 1c1e_H           10 ELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNE   89 (219)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred             eEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence            4677999999999999876  789999652   111  0   0          0135666553     248999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..+
T Consensus        90 D~G~Y~C~~~~~~~  103 (219)
T 1c1e_H           90 DMATYFCARGTTIV  103 (219)
T ss_dssp             GCEEEEEEEEETTT
T ss_pred             cCEEEEEEEeccCc
Confidence            99999999988753

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A

Probab=95.25  E-value=0.022  Score=51.54  Aligned_cols=70  Identities=17%  Similarity=0.212  Sum_probs=51.9

Q ss_pred             ccccCCCeeeeeecccCCC-CCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      +.+.+|+.++|.|.+.+.| .+.+.|.++...+...        ...+.|.++...|+|.|.|.+.+....   ..+.|.
T Consensus        14 ~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~~~s---~~~~l~   82 (170)
T 3ry4_A           14 INVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQTSLS---DPVHLT   82 (170)
T ss_dssp             SEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTSBCC---CCEEEE
T ss_pred             eEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEeCCCce---EeEEEE
Confidence            4577899999999999997 6799998765544322        345677889999999999999875432   344454


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        83 v~   84 (170)
T 3ry4_A           83 VL   84 (170)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2

Probab=95.21  E-value=0.018  Score=55.04  Aligned_cols=69  Identities=20%  Similarity=0.277  Sum_probs=49.7

Q ss_pred             ccccCCCeeeeeecccCCC-CC-eeeccCCc------eeec-------CCCCceEEec---CCeEEEeeccccCCceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IP-VYTWSKGE------VSID-------GSDGHYKLTL---DGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P-~i~w~k~~------~~l~-------~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C  411 (615)
                      +.+.+|+.++|.|.+.+.| .+ .|.|.+..      .++.       ...+++....   ..+|.|.++...|+|.|.|
T Consensus        29 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C  108 (234)
T 2j6e_L           29 ASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC  108 (234)
T ss_dssp             CCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEE
T ss_pred             EEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEE
Confidence            4677899999999999865 45 79996521      1111       1124665443   2379999999999999999


Q ss_pred             cCCCCCC
Q psy10163        412 VAANGIG  418 (615)
Q Consensus       412 ~a~n~~G  418 (615)
                      .+.+..+
T Consensus       109 ~~~~~~~  115 (234)
T 2j6e_L          109 ATWDDSL  115 (234)
T ss_dssp             EEEETTT
T ss_pred             EEEcCCc
Confidence            9988766

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=95.20  E-value=0.01  Score=65.51  Aligned_cols=68  Identities=16%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             cccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCC--------CceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSD--------GHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~--------g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|.+. |.|.|.|+|.++...+....        +.......+.|.|.++...|+|.|.|.|.|.
T Consensus       236 ~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~  312 (527)
T 3qs9_E          236 QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH  312 (527)
T ss_dssp             EEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE
T ss_pred             ceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC
Confidence            45677899999999997 99999999988544332110        0001223356999999999999999999885

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=95.19  E-value=0.024  Score=56.01  Aligned_cols=66  Identities=20%  Similarity=0.327  Sum_probs=47.1

Q ss_pred             CCcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC----CeEEEeeccccCCceeeecCCCCCCc
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~----gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ...+.+.+|+.++|.|.+.|.    |+|.++...+.   .+.....+    +.|.|..+...|+|.|.|.+.|..|.
T Consensus         7 ~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~   76 (289)
T 3mjg_X            7 GPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP---QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL   76 (289)
T ss_dssp             CSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS---EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred             CCeEEEeCCCcEEEEEeccce----EEEECCCCCcc---cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence            445778899999999999986    99987544331   12222222    47899999999999999999998765

>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*

Probab=95.18  E-value=0.021  Score=54.70  Aligned_cols=69  Identities=20%  Similarity=0.357  Sum_probs=51.5

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceeec------------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSID------------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~------------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.      ..++.            ...+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (220)
T 2fbj_H           10 GLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE   89 (220)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred             eEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh
Confidence            5677999999999999876  688999542      11111            12367776643     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..+
T Consensus        90 DsG~Y~C~~~~~~~  103 (220)
T 2fbj_H           90 DTALYYCARLHYYG  103 (220)
T ss_dssp             GCEEEEEEEEETTT
T ss_pred             hCEEEEEEEecccc
Confidence            99999999887644

>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=95.16  E-value=0.012  Score=58.86  Aligned_cols=70  Identities=24%  Similarity=0.400  Sum_probs=52.4

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCCc------eee--c----------CCCCceEEec-----CCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSI--D----------GSDGHYKLTL-----DGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l--~----------~~~g~~~~~~-----~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|  .|.|.|.+..      .++  .          ...+++.+..     ..+|.|.++..
T Consensus        35 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~  114 (282)
T 1qok_A           35 AELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS  114 (282)
T ss_dssp             CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred             CEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence            35678999999999999886  6899996521      111  0          1135666553     24799999999


Q ss_pred             cCCceeeecCCCCCC
Q psy10163        404 QDAGIYVCVAANGIG  418 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G  418 (615)
                      .|+|.|.|.+.+..|
T Consensus       115 ~DsG~Y~C~~~n~~g  129 (282)
T 1qok_A          115 EDTAVYYCNEGTPTG  129 (282)
T ss_dssp             GGCEEEEEEEECSSS
T ss_pred             hhCEEEEEEeccCCC
Confidence            999999999998866

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=95.14  E-value=0.018  Score=60.63  Aligned_cols=70  Identities=19%  Similarity=0.264  Sum_probs=52.0

Q ss_pred             cccccCCCeeeeeecccCCCCC----eeeccCC---ce---ee-------cCCCCceEEecC---CeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP----VYTWSKG---EV---SI-------DGSDGHYKLTLD---GVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P----~i~w~k~---~~---~l-------~~~~g~~~~~~~---gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.|.|    .|.|.++   ..   ++       ....+++.+...   .+|.|.++...|+|.
T Consensus        10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~   89 (438)
T 1qgc_4           10 SLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVAT   89 (438)
T ss_dssp             EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred             eEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCee
Confidence            4667899999999999999974    8999662   11   11       112356655432   379999999999999


Q ss_pred             eeecCCCCCC
Q psy10163        409 YVCVAANGIG  418 (615)
Q Consensus       409 Y~C~a~n~~G  418 (615)
                      |.|.+.+..+
T Consensus        90 Y~C~a~n~~~   99 (438)
T 1qgc_4           90 YYCQQSNEVP   99 (438)
T ss_dssp             EEEEECSSTT
T ss_pred             EEEEEecCCC
Confidence            9999988765

>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*

Probab=95.13  E-value=0.0071  Score=68.65  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=54.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .+.+.+|+.+.|.|.+.+ |.|.|.|.++...+......+++..++.|.|..+...|+|.|.|.|.+..
T Consensus       542 ~v~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~~~~~~~~~~~LlI~~v~~~DsG~Y~C~A~e~~  609 (663)
T 1olz_A          542 QHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERV  609 (663)
T ss_dssp             EEEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEEC
T ss_pred             EEEEecCCcEEEEccCCC-CCCcEEEEECCeeccccCcceEEecCCeEEEEecCcccCeEEEEEEEECc
Confidence            457788999999999999 99999998755444333344455567889999999999999999998873

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=95.10  E-value=0.016  Score=58.72  Aligned_cols=67  Identities=18%  Similarity=0.199  Sum_probs=50.0

Q ss_pred             ccccCCCeeeeeecccCC-----CCCeeeccCCceeecCCCCceEEecC----CeEEEeeccccCCceeeecCCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGY-----PIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-----P~P~i~w~k~~~~l~~~~g~~~~~~~----gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+..|+.++|.|.+.++     |.|.|.|.++...+.  .+++....+    +.|+|.++...|+|.|.|.+.++.+
T Consensus        10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~   85 (313)
T 2d9q_B           10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQP--GGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL   85 (313)
T ss_dssp             SEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCT--TCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred             cEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECC--ccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence            346689999999999998     679999988655553  233332223    4699999999999999998876544

>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}

Probab=95.09  E-value=0.012  Score=57.50  Aligned_cols=67  Identities=22%  Similarity=0.459  Sum_probs=49.6

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---ee--ec----------CCCCceEEecCC-----eEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VS--ID----------GSDGHYKLTLDG-----VLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~--l~----------~~~g~~~~~~~g-----sl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .+  +.          ...+++.+..++     +|.|.++...
T Consensus       144 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~  223 (256)
T 3ux9_B          144 GLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAE  223 (256)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChh
Confidence            4577899999999999887  789999652   1   11  11          112466655433     4999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.+.
T Consensus       224 DsG~Y~C~~~~~  235 (256)
T 3ux9_B          224 DTAVYYCARYID  235 (256)
T ss_dssp             GCEEEEEEEEET
T ss_pred             hCEEEEEEEEcC
Confidence            999999999875

>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}

Probab=95.07  E-value=0.03  Score=47.62  Aligned_cols=80  Identities=20%  Similarity=0.204  Sum_probs=54.3

Q ss_pred             cccccCCCeeeeeecccCCCC-CeeeccCCc------eeecC-------CCCceEEec-----CCeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI-PVYTWSKGE------VSIDG-------SDGHYKLTL-----DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~-P~i~w~k~~------~~l~~-------~~g~~~~~~-----~gsl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|...+.+. ..|.|.+..      .++..       ..+++.+..     ..+|.|.++...|+|.|
T Consensus        10 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y   89 (113)
T 1zox_A           10 EVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIY   89 (113)
T ss_dssp             EEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred             EEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEE
Confidence            467889999999999876543 369996532      22211       125665542     13799999999999999


Q ss_pred             eecCCCCCCcccccceeeee
Q psy10163        410 VCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       410 ~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .|.+.+.... ....+.|.|
T Consensus        90 ~C~v~~~~~~-~~~~v~L~V  108 (113)
T 1zox_A           90 WCGITKGGLD-PMFKVTVNI  108 (113)
T ss_dssp             EEEECCSSSC-CEEEEEEEE
T ss_pred             EEeeEcCCCC-ccEEEEEEE
Confidence            9998776332 444555655

>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*

Probab=95.06  E-value=0.016  Score=55.66  Aligned_cols=69  Identities=16%  Similarity=0.278  Sum_probs=52.1

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eeec------------CCCCceEEec-----CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSID------------GSDGHYKLTL-----DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l~------------~~~g~~~~~~-----~gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++.            ...+++.+..     ..+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~   89 (225)
T 1op3_H           10 GLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE   89 (225)
T ss_dssp             EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence            5678999999999999887  789999542   1   1110            1236776654     248999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..|
T Consensus        90 D~G~Y~C~~~~~~~  103 (225)
T 1op3_H           90 DTAIYYCARKGSDR  103 (225)
T ss_dssp             GCEEEEEEEECCSS
T ss_pred             hCEEEEEEEecCCC
Confidence            99999999988765

>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}

Probab=95.04  E-value=0.019  Score=49.10  Aligned_cols=81  Identities=28%  Similarity=0.324  Sum_probs=54.8

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCCc--------eeec--------CCCCceEEec-----CCeEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKGE--------VSID--------GSDGHYKLTL-----DGVLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~--------~~l~--------~~~g~~~~~~-----~gsl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|.....  ....|.|.+..        .++-        ...+++.+..     +.+|+|.++...|
T Consensus         6 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D   85 (115)
T 2or7_A            6 AVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGD   85 (115)
T ss_dssp             CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGG
T ss_pred             EEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHH
Confidence            4678899999999987653  24679997642        2221        1235665432     3479999999999


Q ss_pred             CceeeecCCCCCCcccccceeeeec
Q psy10163        406 AGIYVCVAANGIGDPIRKEFNVIVR  430 (615)
Q Consensus       406 sG~Y~C~a~n~~G~p~~~~~~l~V~  430 (615)
                      +|.|.|........ ....+.|.|.
T Consensus        86 sG~Y~C~v~~~~~~-~~~~v~L~V~  109 (115)
T 2or7_A           86 GGPYCCVVEIPGAF-HFVDYMLEVK  109 (115)
T ss_dssp             CEEEEEEECCTTSC-EEEEEEEEEE
T ss_pred             CEEEEEEEECCCce-eEEEEEEEEc
Confidence            99999987765433 2555666664

>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=95.03  E-value=0.012  Score=57.80  Aligned_cols=80  Identities=15%  Similarity=0.133  Sum_probs=53.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCC--Ccccccceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI--GDPIRKEFNV  427 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~--G~p~~~~~~l  427 (615)
                      ..+.+|+.++|.|.+.+.+ +.+.|.|+...+..  ........+.|.|..+...|+|.|.|.+.+..  .......+.|
T Consensus       111 ~~v~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~--~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l  187 (242)
T 1p6f_A          111 PEVISGEKVTFYCRLDTAT-SMFLLLKEGRSSHV--QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL  187 (242)
T ss_dssp             SEEETTCEEEEEEECTTSC-SEEEEEECSSSCEE--EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEE
T ss_pred             CccCCCCcEEEEEecCCCC-CEEEEEECCCccCc--cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEE
Confidence            3467899999999988764 68999875322211  00111234579999999999999999998763  2223455667


Q ss_pred             eeccc
Q psy10163        428 IVRGN  432 (615)
Q Consensus       428 ~V~~~  432 (615)
                      .|.+.
T Consensus       188 ~V~~~  192 (242)
T 1p6f_A          188 LVTGD  192 (242)
T ss_dssp             EEEC-
T ss_pred             EEecc
Confidence            77653

>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}

Probab=95.03  E-value=0.019  Score=55.92  Aligned_cols=70  Identities=21%  Similarity=0.358  Sum_probs=51.7

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCC------ceeecC-------CCCceEEecCC---eEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.  |.+.|.|.+.      ..++..       ..+++.+...+   +|.|.++...|+|.|.
T Consensus        11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~   90 (256)
T 3ux9_B           11 SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYY   90 (256)
T ss_dssp             EEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred             cEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEE
Confidence            3678899999999999988  8899999652      122210       22466554433   6999999999999999


Q ss_pred             ecCCCCCC
Q psy10163        411 CVAANGIG  418 (615)
Q Consensus       411 C~a~n~~G  418 (615)
                      |.+.+..+
T Consensus        91 C~~~~~~~   98 (256)
T 3ux9_B           91 CQVRDNNE   98 (256)
T ss_dssp             EEEEETTT
T ss_pred             EEEEECCC
Confidence            99887543

>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A

Probab=95.01  E-value=0.011  Score=55.72  Aligned_cols=66  Identities=15%  Similarity=0.154  Sum_probs=45.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--CceE-EecCCeEEEeeccccCCceeeecCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--GHYK-LTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g~~~-~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ..+.+|+.++|.|.+.+ |.+.+.|.|+...+....  .... ....+.|.|.++...|+|.|.|.+.+.
T Consensus        17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~   85 (201)
T 1nkr_A           17 PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVT   85 (201)
T ss_dssp             SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred             CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecC
Confidence            45678999999999874 788999987432221100  0001 123467999999999999999998653

>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*

Probab=94.98  E-value=0.012  Score=50.97  Aligned_cols=66  Identities=26%  Similarity=0.346  Sum_probs=47.9

Q ss_pred             cccccCCCeeeeeecccCCC----CCeeeccCCc-----eeec---CCCCceEEec--------CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP----IPVYTWSKGE-----VSID---GSDGHYKLTL--------DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P----~P~i~w~k~~-----~~l~---~~~g~~~~~~--------~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.+    .+.|.|.+..     .+..   ...+++.+..        +.+|+|.++...|+|.
T Consensus        16 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~   95 (120)
T 3noi_A           16 EIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASI   95 (120)
T ss_dssp             EEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEE
T ss_pred             EEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEE
Confidence            46788999999999988766    5679996543     1111   1235665432        2379999999999999


Q ss_pred             eeecCC
Q psy10163        409 YVCVAA  414 (615)
Q Consensus       409 Y~C~a~  414 (615)
                      |.|.+.
T Consensus        96 Y~C~v~  101 (120)
T 3noi_A           96 YVCRVE  101 (120)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999865

>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}

Probab=94.94  E-value=0.043  Score=53.90  Aligned_cols=67  Identities=24%  Similarity=0.412  Sum_probs=49.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec--------C---CCCceEEec----CCeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID--------G---SDGHYKLTL----DGVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~--------~---~~g~~~~~~----~gsl~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+. .|.+.|.|.+.      ..++.        .   ..+++.+..    +.+|.|.++...|+|
T Consensus        35 ~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G  113 (268)
T 3pl6_D           35 NKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSA  113 (268)
T ss_dssp             EEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCE
T ss_pred             EEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCE
Confidence            46788999999999976 68889999651      11110        0   016666654    457999999999999


Q ss_pred             eeeecCCCC
Q psy10163        408 IYVCVAANG  416 (615)
Q Consensus       408 ~Y~C~a~n~  416 (615)
                      .|.|.+.+.
T Consensus       114 ~Y~C~~~~~  122 (268)
T 3pl6_D          114 VYLCATSAL  122 (268)
T ss_dssp             EEEEEEESS
T ss_pred             EEEEEEecC
Confidence            999998863

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=94.92  E-value=0.019  Score=62.37  Aligned_cols=66  Identities=23%  Similarity=0.527  Sum_probs=48.9

Q ss_pred             cccCCCeeeeeecccCC-CCC-eeeccCCceeecC--------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCIAIGY-PIP-VYTWSKGEVSIDG--------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~-P~P-~i~w~k~~~~l~~--------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|.+.|. |.| .|+|.++...+..        ..|.+..  ...|.|..+...| |.|.|.|.|..|.
T Consensus       230 ~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d-G~Y~C~a~n~~g~  305 (523)
T 2rcj_C          230 KSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSN  305 (523)
T ss_pred             ccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEE--EEEEEechhhcCC-ceEEEEEEeCCCC
Confidence            34689999999999987 888 8999875433221        1122221  2378898998899 9999999998885

>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2

Probab=94.91  E-value=0.0071  Score=57.11  Aligned_cols=65  Identities=17%  Similarity=0.281  Sum_probs=48.1

Q ss_pred             ccCCCeeeeeecccCC-CC-CeeeccCCceeecCC----------CCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PI-PVYTWSKGEVSIDGS----------DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~-P~i~w~k~~~~l~~~----------~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|. |. |.|.|.++...+...          ++ +.  ..+.|.|..+...|+|.|.|.+.|..+.
T Consensus       125 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~-~~--~~s~L~i~~~~~~d~G~Y~C~a~n~~~~  201 (212)
T 1nfd_E          125 ELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQN-YM--TSSYLSLTADQWKSHNRVSCQVTHEGET  201 (212)
T ss_dssp             HHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSC-EE--EEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred             hccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCC-ce--EEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence            3468899999999987 54 799998755444321          11 22  2256889999999999999999998664

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=94.91  E-value=0.017  Score=62.87  Aligned_cols=70  Identities=21%  Similarity=0.329  Sum_probs=52.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.++.      .++.       ...+++.....   .+|.|.++...|+|.|.|.
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   88 (523)
T 2rcj_C            9 SASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCA   88 (523)
T ss_pred             ceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEE
Confidence            456889999999999999999999997632      1111       11356654332   3799999999999999999


Q ss_pred             CCCCCC
Q psy10163        413 AANGIG  418 (615)
Q Consensus       413 a~n~~G  418 (615)
                      +.|..|
T Consensus        89 a~n~~g   94 (523)
T 2rcj_C           89 SWNSSD   94 (523)
T ss_pred             EccCCC
Confidence            998654

>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...

Probab=94.90  E-value=0.01  Score=56.69  Aligned_cols=65  Identities=26%  Similarity=0.499  Sum_probs=46.4

Q ss_pred             ccCCCeeeeeecccCC-CCC-eeeccCCceeecC-------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PIP-VYTWSKGEVSIDG-------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~P-~i~w~k~~~~l~~-------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|. |.| .|.|.++...+..       ..|.+.  ....|.|..+...| |.|.|.+.|..|.
T Consensus       139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d-g~y~C~a~n~~~~  212 (222)
T 1q9r_B          139 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASS  212 (222)
T ss_dssp             CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEE--EEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred             ccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEE--EEEEEEECchhcCC-CeEEEEEEccCCC
Confidence            4578999999999986 999 9999875432211       122222  22357787777788 9999999998775

>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H

Probab=94.90  E-value=0.012  Score=55.86  Aligned_cols=65  Identities=25%  Similarity=0.481  Sum_probs=44.2

Q ss_pred             ccCCCeeeeeecccC-CCCC-eeeccCCceeec---C----CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIG-YPIP-VYTWSKGEVSID---G----SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G-~P~P-~i~w~k~~~~l~---~----~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.| .|.| .|+|.++...+.   .    ..+.+..  ...|.| .....|+|.|.|.|.|..+.
T Consensus       136 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~s~L~i-~~~~~d~g~Y~C~a~n~~~~  209 (219)
T 1c1e_H          136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTV-PSSPRPSETVTCNVAHPASS  209 (219)
T ss_dssp             SCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEE--EEEEEE-ESSSTTTSCCEEEEEEGGGT
T ss_pred             cccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEE--EEEEEE-ecccCCCCEEEEEEEeCCCC
Confidence            457899999999999 8999 999987543221   0    0122221  235666 44444779999999997664

>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.89  E-value=0.014  Score=51.60  Aligned_cols=68  Identities=28%  Similarity=0.492  Sum_probs=48.2

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCc----eee-cCCC---CceEEe--------cCCeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGE----VSI-DGSD---GHYKLT--------LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~----~~l-~~~~---g~~~~~--------~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+. |.+.|.|.+..    .++ ....   +++...        ...+|.|.++...|+|.|.|
T Consensus        17 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   96 (136)
T 2d9c_A           17 SVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC   96 (136)
T ss_dssp             EEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEE
T ss_pred             EEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEE
Confidence            4678899999999998876 67889996532    122 1111   333321        13579999999999999999


Q ss_pred             cCCCC
Q psy10163        412 VAANG  416 (615)
Q Consensus       412 ~a~n~  416 (615)
                      .+.+.
T Consensus        97 ~~~~~  101 (136)
T 2d9c_A           97 VKFRK  101 (136)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            97654

>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A

Probab=94.88  E-value=0.027  Score=48.04  Aligned_cols=67  Identities=22%  Similarity=0.426  Sum_probs=49.6

Q ss_pred             cccccCCCeeeeeeccc-CCCCCeeeccCC------ceee--c--CC---------CCceEEecCC---eEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYPIPVYTWSKG------EVSI--D--GS---------DGHYKLTLDG---VLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~------~~~l--~--~~---------~g~~~~~~~g---sl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|.+. +.+.+.|.|.+.      ..++  .  ..         .+++.+...+   +|+|.++...|
T Consensus         8 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~D   87 (111)
T 2qhl_A            8 VKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTREDD   87 (111)
T ss_dssp             EEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCGGG
T ss_pred             eEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCChhH
Confidence            45678999999999998 888889999541      2222  1  10         4666655333   79999999999


Q ss_pred             CceeeecCCC
Q psy10163        406 AGIYVCVAAN  415 (615)
Q Consensus       406 sG~Y~C~a~n  415 (615)
                      +|.|.|.+.+
T Consensus        88 sG~Y~C~~~~   97 (111)
T 2qhl_A           88 GGEYFCGEVE   97 (111)
T ss_dssp             CEEEEEEEEE
T ss_pred             CEEEEEEEcc
Confidence            9999998765

>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1

Probab=94.88  E-value=0.035  Score=47.43  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCcccccCCCeeeeeecccC-CCCCeeeccCCc--eeecCCCCceEEecCC-----eEEEeeccccCCceeeecCCCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIG-YPIPVYTWSKGE--VSIDGSDGHYKLTLDG-----VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~--~~l~~~~g~~~~~~~g-----sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +....+..|+...|.|.+.+ .+.|.++|.|-+  .-+....+.-.-...+     .|.+..+.+.|+|.|.|.|....|
T Consensus        18 ~S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg   97 (120)
T 2aw2_A           18 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSN   97 (120)
T ss_dssp             TEEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred             cccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCC
Confidence            34457788999999999999 799999998722  1111111111111112     467778899999999999999888


Q ss_pred             c
Q psy10163        419 D  419 (615)
Q Consensus       419 ~  419 (615)
                      .
T Consensus        98 ~   98 (120)
T 2aw2_A           98 L   98 (120)
T ss_dssp             E
T ss_pred             c
Confidence            6

>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A

Probab=94.88  E-value=0.014  Score=54.97  Aligned_cols=62  Identities=16%  Similarity=0.210  Sum_probs=42.9

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe----cCCeEEEeeccccCCceeeecCCCC
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+|+.++|.|.+.+ |.|.+.|.|+...+... ......    ..+.|.|.++.  |+|.|.|.+.+.
T Consensus       118 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~  183 (201)
T 1nkr_A          118 TVLAGENVTLSCSSRS-SYDMYHLSREGEAHERR-LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH  183 (201)
T ss_dssp             EECTTCEEEEEEEESS-CCSEEEEEETTCSSCEE-EECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred             ccCCCCeEEEEEeCCC-CCceEEEEECCcccCcc-cccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence            4678999999999887 56889997754322111 011111    14578898887  999999998754

>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A

Probab=94.88  E-value=0.023  Score=55.44  Aligned_cols=67  Identities=16%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             ccccCCCeeeeeecccCC--CCCeeeccCC------ceee-----------cCCCCceEEecCC-----eEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSI-----------DGSDGHYKLTLDG-----VLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l-----------~~~~g~~~~~~~g-----sl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.  |.+.|.|.+.      ..++           ....+++.+..+.     +|.|.++...|
T Consensus        18 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D   97 (257)
T 3gkz_A           18 SLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED   97 (257)
T ss_dssp             SEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred             eEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence            457789999999999984  5789999651      1110           0123566655433     69999999999


Q ss_pred             CceeeecCCCC
Q psy10163        406 AGIYVCVAANG  416 (615)
Q Consensus       406 sG~Y~C~a~n~  416 (615)
                      +|.|.|.+.+.
T Consensus        98 sG~Y~C~~~n~  108 (257)
T 3gkz_A           98 TATYYCSYFDS  108 (257)
T ss_dssp             CEEEEEEEECT
T ss_pred             CEEEEEEEecC
Confidence            99999999886

>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A

Probab=94.88  E-value=0.034  Score=53.61  Aligned_cols=65  Identities=18%  Similarity=0.389  Sum_probs=47.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceee----------cCCCCceEEec----CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSI----------DGSDGHYKLTL----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l----------~~~~g~~~~~~----~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+ |.+.|.|.+.      ..++          ....+++.+..    ..+|.|.++...|+|.
T Consensus        11 ~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~   89 (240)
T 3q5y_A           11 HIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAM   89 (240)
T ss_dssp             EEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred             eeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence            356789999999999876 8889999651      0110          11225666554    2379999999999999


Q ss_pred             eeecCC
Q psy10163        409 YVCVAA  414 (615)
Q Consensus       409 Y~C~a~  414 (615)
                      |.|.+.
T Consensus        90 Y~C~~~   95 (240)
T 3q5y_A           90 YFCASS   95 (240)
T ss_dssp             EEEEEE
T ss_pred             EEEEEc
Confidence            999986

>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*

Probab=94.86  E-value=0.024  Score=55.09  Aligned_cols=67  Identities=16%  Similarity=0.251  Sum_probs=49.2

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---cee---ec----C-------CCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---EVS---ID----G-------SDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~~~---l~----~-------~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.|  .|.|.|.+.   ..+   +.    .       ..+++.+..+     .+|.|.++...|
T Consensus       132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D  211 (242)
T 2znx_A          132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED  211 (242)
T ss_dssp             SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGG
T ss_pred             ceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCc
Confidence            3477899999999999987  578999652   111   11    0       1456665432     379999999999


Q ss_pred             CceeeecCCCC
Q psy10163        406 AGIYVCVAANG  416 (615)
Q Consensus       406 sG~Y~C~a~n~  416 (615)
                      +|.|.|.+.+.
T Consensus       212 ~G~Y~C~a~~~  222 (242)
T 2znx_A          212 TATYYCANXDG  222 (242)
T ss_dssp             CEEEEEEETTS
T ss_pred             CEEEEEeccCC
Confidence            99999999873

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=94.86  E-value=0.022  Score=56.89  Aligned_cols=69  Identities=25%  Similarity=0.421  Sum_probs=47.1

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccCCc-----ee----------ec-CCCCceEEe----cCCeEEEeeccccCC
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGE-----VS----------ID-GSDGHYKLT----LDGVLQIVGLVRQDA  406 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~-----~~----------l~-~~~g~~~~~----~~gsl~I~~~~~~Ds  406 (615)
                      +.+.+.+|+.++|.|.+. +.|.+.|+|.|..     .+          +. .-.++..+.    .+++|.|.++...|+
T Consensus         7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~   86 (308)
T 4fom_A            7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS   86 (308)
T ss_dssp             CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred             CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence            346678899999999986 4556679997521     00          00 112333332    235799999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      |.|.|.+.+.
T Consensus        87 G~Y~C~a~n~   96 (308)
T 4fom_A           87 GKYICKAVTF   96 (308)
T ss_dssp             EEEEEEEEET
T ss_pred             EEEEEEEeeC
Confidence            9999988654

>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...

Probab=94.84  E-value=0.013  Score=55.20  Aligned_cols=65  Identities=15%  Similarity=0.290  Sum_probs=47.4

Q ss_pred             cCCCeeeeeecccC-CCCC-eeeccCCceeecCC-----------CCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        353 EEGNFVTLRCIAIG-YPIP-VYTWSKGEVSIDGS-----------DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       353 ~eg~~~tl~C~~~G-~P~P-~i~w~k~~~~l~~~-----------~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+|+.++|.|.+.| .|.| .|.|.++...+...           ++.+.  ....|.|..+...|.|.|.|.|.|....
T Consensus       125 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d~G~Y~C~a~n~~~~  202 (213)
T 3d9a_L          125 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS--MSSTLTLTKDEYERHNSYTCEATHKTST  202 (213)
T ss_dssp             HHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEE--EEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred             cCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEE--EEEEEEEeccccCCCCEEEEEEEEccCC
Confidence            36889999999988 6776 89998755444322           12222  2237899999999999999999987543

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=94.83  E-value=0.02  Score=60.34  Aligned_cols=69  Identities=23%  Similarity=0.426  Sum_probs=51.6

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---cee---ec------------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---EVS---ID------------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~~~---l~------------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.|.|  .|.|.|.++   ..+   +.            ...+++.+..+     .+|.|.++...
T Consensus       228 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~  307 (438)
T 1qgc_4          228 GLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSA  307 (438)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChh
Confidence            4577899999999999999  779999763   111   00            12356665543     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.|..+
T Consensus       308 D~G~Y~C~a~n~~~  321 (438)
T 1qgc_4          308 DTAMYYCVRREDGG  321 (438)
T ss_dssp             GCCEEEEEECCSSS
T ss_pred             hCEEEEEEEEccCC
Confidence            99999999998544

>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A

Probab=94.81  E-value=0.021  Score=55.82  Aligned_cols=69  Identities=22%  Similarity=0.272  Sum_probs=49.8

Q ss_pred             cccccCCCeeeeeecccCCCCC-eeeccCC---c---eeecC-------CCCceEEecC---CeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-VYTWSKG---E---VSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~---~---~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+.|.| .|.|.+.   .   .++..       ..+++.....   .+|.|.++...|+|.|.|
T Consensus       150 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C  229 (257)
T 3gkz_A          150 IMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFC  229 (257)
T ss_dssp             EEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred             eEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEE
Confidence            3667899999999999999988 9999651   1   11110       1245543322   259999999999999999


Q ss_pred             cCCCCC
Q psy10163        412 VAANGI  417 (615)
Q Consensus       412 ~a~n~~  417 (615)
                      .+.+..
T Consensus       230 ~~~~~~  235 (257)
T 3gkz_A          230 HQWSSF  235 (257)
T ss_dssp             EECSSS
T ss_pred             EEccCC
Confidence            988753

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=94.76  E-value=0.038  Score=60.76  Aligned_cols=81  Identities=22%  Similarity=0.339  Sum_probs=59.1

Q ss_pred             cccccCCCeeeeeecccCCCCCee----eccC--Cce---eec-------CCCCceEEe---cCCe--EEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVY----TWSK--GEV---SID-------GSDGHYKLT---LDGV--LQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i----~w~k--~~~---~l~-------~~~g~~~~~---~~gs--l~I~~~~~~DsG  407 (615)
                      .+.+.+|+.++|.|.+.+.|.|.+    .|.+  +..   ++.       ...+++.+.   ..+.  |.|..+...|+|
T Consensus       340 ~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G  419 (585)
T 2ocw_A          340 VVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAG  419 (585)
T ss_pred             ceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCE
Confidence            456778999999999999999988    7987  442   322       123455554   2344  899999999999


Q ss_pred             eeeecCCCCCCcccccceeeeecc
Q psy10163        408 IYVCVAANGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       408 ~Y~C~a~n~~G~p~~~~~~l~V~~  431 (615)
                      .|.|.| |..|. ....+.|.|..
T Consensus       420 ~Y~C~a-n~~g~-~~~~~~l~V~~  441 (585)
T 2ocw_A          420 FYWCLT-NGDTL-WRTTVEIKIIE  441 (585)
T ss_pred             EEEEcc-cCCCc-cceeEEEEEec
Confidence            999999 87776 45556666643

>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}

Probab=94.75  E-value=0.039  Score=55.05  Aligned_cols=68  Identities=16%  Similarity=0.290  Sum_probs=49.7

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCCc------eeecC------------CCCceEEecCC-----eEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKGE------VSIDG------------SDGHYKLTLDG-----VLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~------~~l~~------------~~g~~~~~~~g-----sl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.  |.+.|.|.+..      .++..            ..+++.+..+.     +|.|.++..
T Consensus         9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~   88 (280)
T 3fku_X            9 AEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRS   88 (280)
T ss_dssp             CCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCS
T ss_pred             CEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence            3567789999999999876  66889996521      11111            12466655332     799999999


Q ss_pred             cCCceeeecCCCC
Q psy10163        404 QDAGIYVCVAANG  416 (615)
Q Consensus       404 ~DsG~Y~C~a~n~  416 (615)
                      .|+|.|.|.+.+.
T Consensus        89 ~DsG~Y~C~~~~~  101 (280)
T 3fku_X           89 EDTAVYYCARSPS  101 (280)
T ss_dssp             TTCEECCEEECSS
T ss_pred             hhCEEEEEEEecC
Confidence            9999999998876

>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*

Probab=94.74  E-value=0.015  Score=54.80  Aligned_cols=66  Identities=23%  Similarity=0.435  Sum_probs=47.7

Q ss_pred             ccCCCeeeeeecccCC-CC-CeeeccCCceeecC---------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PI-PVYTWSKGEVSIDG---------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~-P~i~w~k~~~~l~~---------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|. |. +.|.|.++...+..         ..+.+.+  ...|.|..+...|.|.|.|.+.|..+.
T Consensus       126 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~G~Y~C~a~n~~~~  202 (213)
T 3mj8_L          126 ELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMA--TSYLTMTADAWKSRNTFICKVTHGGNT  202 (213)
T ss_dssp             HHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEE--EEEEEEESHHHHSCSCEEEEEEETTEE
T ss_pred             cccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEE--EEEEEEeHHHcCCCCEEEEEEEECCcc
Confidence            3378999999999986 33 39999876554432         1222222  245888888999999999999998654

>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}

Probab=94.73  E-value=0.026  Score=55.29  Aligned_cols=70  Identities=16%  Similarity=0.190  Sum_probs=45.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---C---ceeecCC------------CCceEEe-----cCCeEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---G---EVSIDGS------------DGHYKLT-----LDGVLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~---~~~l~~~------------~g~~~~~-----~~gsl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|.+.+.|.|.|.|.+   +   ..++...            .+++.+.     ...+|.|.++...|
T Consensus        11 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D   90 (259)
T 3omz_A           11 SVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEND   90 (259)
T ss_dssp             CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGG
T ss_pred             eeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCccc
Confidence            4678899999999999999999999954   1   1111100            0122211     23369999999999


Q ss_pred             CceeeecCCCCCC
Q psy10163        406 AGIYVCVAANGIG  418 (615)
Q Consensus       406 sG~Y~C~a~n~~G  418 (615)
                      +|.|.|.+.+..+
T Consensus        91 sG~Y~C~~~~~~~  103 (259)
T 3omz_A           91 SGVYYCATWDQNY  103 (259)
T ss_dssp             CEEEEEEEECTTS
T ss_pred             CEEEEEEEeeCCc
Confidence            9999999988755

>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}

Probab=94.72  E-value=0.014  Score=50.37  Aligned_cols=68  Identities=24%  Similarity=0.421  Sum_probs=47.4

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCc----eee-cCC---CCceEEe--------cCCeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGE----VSI-DGS---DGHYKLT--------LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~----~~l-~~~---~g~~~~~--------~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+. |.+.|.|.+..    .++ ...   .+++...        ...+|.|.++...|+|.|.|
T Consensus        16 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   95 (120)
T 2yz1_A           16 SVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYC   95 (120)
T ss_dssp             EEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEE
T ss_pred             eEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEE
Confidence            4678899999999998875 67899996532    122 111   1222211        12479999999999999999


Q ss_pred             cCCCC
Q psy10163        412 VAANG  416 (615)
Q Consensus       412 ~a~n~  416 (615)
                      .+.+.
T Consensus        96 ~~~~~  100 (120)
T 2yz1_A           96 VKFQK  100 (120)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            97654

>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A

Probab=94.71  E-value=0.025  Score=50.03  Aligned_cols=69  Identities=29%  Similarity=0.396  Sum_probs=50.6

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCC------ceeecCCCCceEEec-----CCeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+.+.+|+.++|.|.+.+.  +.+.|.|.+.      +.++ ...+++.+..     ..+|+|.++...|+|.|.|.+.+
T Consensus         9 ~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li-~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~   87 (126)
T 3moq_A            9 TATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSI-SIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFY   87 (126)
T ss_dssp             EEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEEC-CCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred             eEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEE-EeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEE
Confidence            4567899999999998876  5678999652      2222 2346665532     23799999999999999999876


Q ss_pred             CCC
Q psy10163        416 GIG  418 (615)
Q Consensus       416 ~~G  418 (615)
                      ..+
T Consensus        88 ~~~   90 (126)
T 3moq_A           88 VFF   90 (126)
T ss_dssp             EEE
T ss_pred             cCC
Confidence            544

>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}

Probab=94.67  E-value=0.022  Score=57.20  Aligned_cols=68  Identities=16%  Similarity=0.251  Sum_probs=50.4

Q ss_pred             cccccCCCeeeeeecccCCCCC------eeeccCC---c---eeecC-------CCCceEEecC---CeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP------VYTWSKG---E---VSIDG-------SDGHYKLTLD---GVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P------~i~w~k~---~---~~l~~-------~~g~~~~~~~---gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+.|.|      .|.|.+.   .   .++..       ..+++.....   .+|.|.++...|+
T Consensus       168 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds  247 (291)
T 2gki_A          168 SLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDL  247 (291)
T ss_dssp             EEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             EEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHC
Confidence            4567899999999999999876      8999652   1   12211       1355654322   3799999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      |.|.|.+.+.
T Consensus       248 G~Y~C~a~~~  257 (291)
T 2gki_A          248 AVYYCKQSYY  257 (291)
T ss_dssp             EEEEEEEEET
T ss_pred             EEEEEEEccC
Confidence            9999998874

>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=94.64  E-value=0.03  Score=55.70  Aligned_cols=78  Identities=18%  Similarity=0.190  Sum_probs=50.6

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe----cCCeEEEeeccccCCceeeecCCCCCC----cccc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGIG----DPIR  422 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~~G----~p~~  422 (615)
                      .+.+|+.++|.|.+.+.| +.+.|.|+...+.... .....    ..+.|.|.++.  |+|.|.|.+.+...    ....
T Consensus       117 ~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~-~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S  192 (257)
T 1b6u_A          117 TVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRF-SAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSS  192 (257)
T ss_dssp             TCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECC-BCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCC
T ss_pred             ccCCCCEEEEEEeCCCCC-cEEEEEECCcccCccc-ccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCC
Confidence            467899999999998875 7899977543322111 11111    24578888887  99999999886532    2233


Q ss_pred             cceeeeeccc
Q psy10163        423 KEFNVIVRGN  432 (615)
Q Consensus       423 ~~~~l~V~~~  432 (615)
                      ..+.|.|.+.
T Consensus       193 ~pl~L~V~g~  202 (257)
T 1b6u_A          193 DPLLVSVTGN  202 (257)
T ss_dssp             CCEEECCBCC
T ss_pred             CCEEEEEecc
Confidence            4466666653

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=94.60  E-value=0.027  Score=55.25  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=52.7

Q ss_pred             cccCCCeeeeeecccC-CCCC--eeeccCCceeecCCCCceEEecCCeEEEeec---cccCCce--eeecCCCCCCcccc
Q psy10163        351 EAEEGNFVTLRCIAIG-YPIP--VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGL---VRQDAGI--YVCVAANGIGDPIR  422 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G-~P~P--~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~---~~~DsG~--Y~C~a~n~~G~p~~  422 (615)
                      .+.+|+.++|.|.+.| .|.|  .|+|.++...+..    .+....+.+.+..+   ...|+|.  |.|.+.|..|. ..
T Consensus        14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~-~~   88 (265)
T 2oz4_A           14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS-QE   88 (265)
T ss_dssp             EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEE-EE
T ss_pred             eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCC-cE
Confidence            4678999999999999 8988  9999886554432    23334456666655   6788885  99999998775 44


Q ss_pred             cceeeee
Q psy10163        423 KEFNVIV  429 (615)
Q Consensus       423 ~~~~l~V  429 (615)
                      ..+.|.|
T Consensus        89 ~~~~l~V   95 (265)
T 2oz4_A           89 TLQTVTI   95 (265)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            4444444

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=94.59  E-value=0.01  Score=63.08  Aligned_cols=68  Identities=13%  Similarity=0.137  Sum_probs=51.0

Q ss_pred             ccccCCCeeeeeecccCCCCC---eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIP---VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P---~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+.+|+.++|.|.+.|.|.|   .|+|.|+...+..... ......+.|.|..+...|+|.|.|.+.|..|
T Consensus        96 ~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g  166 (450)
T 1z7z_I           96 SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA-VGEPAEVTTTVLVRRDHHGANFSCRTELDLR  166 (450)
T ss_dssp             SEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC-CTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred             ceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccc-cccccceEEEEEeeccccCceEEEEEEcccC
Confidence            456789999999999999988   9999886554432110 0111234789999999999999999998755

>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*

Probab=94.57  E-value=0.022  Score=54.47  Aligned_cols=66  Identities=21%  Similarity=0.381  Sum_probs=46.9

Q ss_pred             ccCCCeeeeeecccCC-CC--CeeeccCCceeecC--------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PI--PVYTWSKGEVSIDG--------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~--P~i~w~k~~~~l~~--------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.+. |.  |.|.|.++...+..        ..|.|.+.  ..|.|......|.|.|.|.+.+..+.
T Consensus       134 ~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g~ytC~v~n~~~~  210 (220)
T 2fbj_H          134 ALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMS--NQLTLPAVECPEGESVKCSVQHDSNP  210 (220)
T ss_dssp             SSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEE--EEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred             ccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEE--EEEEECHHHcCCCCeEEEEEEcCCCc
Confidence            4578899999999987 76  79999875433211        12333322  24677777778899999999998875

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=94.55  E-value=0.018  Score=65.53  Aligned_cols=45  Identities=33%  Similarity=0.918  Sum_probs=38.4

Q ss_pred             CCCCCCCCC-----CCCcCCCCCCCCCcccCCCccccCCCCCccCCcccC
Q psy10163        269 YKEGECRPQ-----PQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDI  313 (615)
Q Consensus       269 ~k~g~Cp~~-----~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~~~  313 (615)
                      .|+|.||..     ...-|...|..|.+|.+..|||.|+||..|+.|...
T Consensus       106 ~~~g~Cp~~~~~~~~~~~c~~~c~~d~~c~g~~~Cc~n~cG~~C~~P~~~  155 (680)
T 1zlg_A          106 VKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTL  155 (680)
T ss_pred             CcCCcCcCCcccccccchhhhhccccccCCCcccccccccccccccccee
Confidence            499999933     233599999999999999999999999999998654

>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A

Probab=94.54  E-value=0.053  Score=46.36  Aligned_cols=68  Identities=15%  Similarity=0.271  Sum_probs=48.3

Q ss_pred             cccccCCCeeeeeecccCC---CCCeeeccCC------ceeec-----------CCCCceEEec---CC--eEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY---PIPVYTWSKG------EVSID-----------GSDGHYKLTL---DG--VLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~---P~P~i~w~k~------~~~l~-----------~~~g~~~~~~---~g--sl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+...   +.+.|.|.+.      ..++.           ...+++.+..   ..  +|.|.++..
T Consensus         7 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~   86 (116)
T 3bj9_1            7 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP   86 (116)
T ss_dssp             EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred             cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCCh
Confidence            3678899999999998754   5678999531      12221           0135665543   23  799999999


Q ss_pred             cCCceeeecCCCC
Q psy10163        404 QDAGIYVCVAANG  416 (615)
Q Consensus       404 ~DsG~Y~C~a~n~  416 (615)
                      .|+|.|.|.+.+.
T Consensus        87 ~DsG~Y~C~~~~~   99 (116)
T 3bj9_1           87 EDEAMYYCAMGAR   99 (116)
T ss_dssp             GGCEEEEEEECCS
T ss_pred             hHCEEEEEEEeCC
Confidence            9999999987654

>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}

Probab=94.54  E-value=0.03  Score=52.48  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=41.6

Q ss_pred             CCC-eeeeeecccCC-CCCeeeccCCceeecCCCCceEEecCCeEEEeecccc-CCceeeecCCCCCCc
Q psy10163        354 EGN-FVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQ-DAGIYVCVAANGIGD  419 (615)
Q Consensus       354 eg~-~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~-DsG~Y~C~a~n~~G~  419 (615)
                      .|. .++|.|.+.|. |.|.|.|.++...+         .....|.|...... |+|.|+|.|.|..|.
T Consensus       122 ~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l---------~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~  181 (193)
T 2if7_A          122 NMTCELHLTCSVEDADDNVSFRWEALGNTL---------SSQPNLTVSWDPRISSEQDYTCIAENAVSN  181 (193)
T ss_dssp             CSSEEEEEEEEEESCCTTCEEEEEETTEEE---------ESSSEEEEEECTTTCSCCEEEEEEEETTEE
T ss_pred             CCCceEEEEEEEecCCCceEEEEEeCCEEc---------CCCCeEEEEeccCcCCCCcEEEEEECCCCc
Confidence            344 79999999995 58999998754332         22345666544443 899999999999886

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=94.53  E-value=0.032  Score=51.13  Aligned_cols=70  Identities=17%  Similarity=0.186  Sum_probs=47.1

Q ss_pred             cccCCCeeeeeecccCCCCC--eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        351 EAEEGNFVTLRCIAIGYPIP--VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P--~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+|+.++|.|.+.+.|.|  .|.|.++...+..... .  .....|.|.  ...|+|.|.|.+.+.    ....+.|.
T Consensus         9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~-~--~~~~~l~i~--~~~d~G~Y~C~~~n~----~~~~~~l~   79 (184)
T 3b5h_A            9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL-P--GQKTEFKVD--SDDQWGEYSCVFLPE----PMGTANIQ   79 (184)
T ss_dssp             EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC-C--CSEEEEEEC--GGGCCEEEEEEEEST----TSCEEEEE
T ss_pred             EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc-c--CCcEEEEEe--chhhCeEEEEEEECC----cCcEEEEE
Confidence            46789999999999998888  8999886655542221 0  011233333  689999999999872    23444555


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        80 V   80 (184)
T 3b5h_A           80 L   80 (184)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...

Probab=94.52  E-value=0.016  Score=55.71  Aligned_cols=69  Identities=14%  Similarity=0.261  Sum_probs=51.4

Q ss_pred             ccccCCCeeeeeecccCCCC----CeeeccCCc------eeec-----------CCCCceEEec-----CCeEEEeeccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI----PVYTWSKGE------VSID-----------GSDGHYKLTL-----DGVLQIVGLVR  403 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~----P~i~w~k~~------~~l~-----------~~~g~~~~~~-----~gsl~I~~~~~  403 (615)
                      +.+.+|+.++|.|.+.+.|.    +.|.|.+..      .++.           .-.+++.+..     ..+|.|.++..
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~   89 (228)
T 3bae_H           10 GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT   89 (228)
T ss_dssp             SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred             eeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence            46778999999999999885    899995421      1111           0135666553     25899999999


Q ss_pred             cCCceeeecCCCCCC
Q psy10163        404 QDAGIYVCVAANGIG  418 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~G  418 (615)
                      .|+|.|.|.+.+..|
T Consensus        90 ~D~G~Y~C~~~~~~g  104 (228)
T 3bae_H           90 ADTATYYCARRGFYG  104 (228)
T ss_dssp             GGCEEEEEEEEEEST
T ss_pred             ccCEEEEEEEecCCC
Confidence            999999999987654

>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}

Probab=94.52  E-value=0.011  Score=57.41  Aligned_cols=69  Identities=10%  Similarity=0.119  Sum_probs=47.8

Q ss_pred             ccccCCCeeeeeecccCC-CC-C-eeeccCCceee-cCCCCceEEecC------CeEEEeeccccCCceeeecCCCCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGY-PI-P-VYTWSKGEVSI-DGSDGHYKLTLD------GVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-P~-P-~i~w~k~~~~l-~~~~g~~~~~~~------gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+.+|+.++|.|.+.|. |. | .|+|.++...+ ....+......+      ..|.|..+...|.|.|.|.+.+..+
T Consensus        23 ~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~  101 (231)
T 2w59_A           23 GELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEEL  101 (231)
T ss_dssp             HHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTC
T ss_pred             hhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCC
Confidence            345689999999999985 74 6 99998644333 221111111222      3588888888999999999988754

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=94.51  E-value=0.018  Score=58.14  Aligned_cols=72  Identities=24%  Similarity=0.388  Sum_probs=51.3

Q ss_pred             CCcccccCCCeeeeeecccCC----CCCeeeccCCc----------------eeecCCCCceEEe----cCCeEEEeecc
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGY----PIPVYTWSKGE----------------VSIDGSDGHYKLT----LDGVLQIVGLV  402 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~----P~P~i~w~k~~----------------~~l~~~~g~~~~~----~~gsl~I~~~~  402 (615)
                      ...+.+.+|+.++|.|.+.+.    |.+.|.|.+..                .+.....+++.+.    .+++|.|.++.
T Consensus        21 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~  100 (331)
T 3u83_A           21 NDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLE  100 (331)
T ss_dssp             CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCC
T ss_pred             CCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccC
Confidence            345778899999999999887    66689998732                0111223555544    34689999999


Q ss_pred             ccCCceeeec-CCCCCC
Q psy10163        403 RQDAGIYVCV-AANGIG  418 (615)
Q Consensus       403 ~~DsG~Y~C~-a~n~~G  418 (615)
                      ..|+|.|.|. +.+..|
T Consensus       101 ~~D~G~Y~C~~~~~~~~  117 (331)
T 3u83_A          101 LEDEGVYICEFATFPTG  117 (331)
T ss_dssp             GGGCEEEEEEEEEETTE
T ss_pred             cccCcEEEEEEEecCCC
Confidence            9999999997 444333

>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}

Probab=94.44  E-value=0.06  Score=48.66  Aligned_cols=68  Identities=24%  Similarity=0.334  Sum_probs=50.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-------CCCCceEEe---cCCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-------GSDGHYKLT---LDGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-------~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+.      +.++.       ...+++.+.   .+.+|+|.++...|+|.|.|.
T Consensus         9 ~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~   88 (143)
T 3u6r_L            9 TLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQ   88 (143)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred             EEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEEEEEE
Confidence            36678999999999998887788999542      22321       123566554   233799999999999999999


Q ss_pred             CCCC
Q psy10163        413 AANG  416 (615)
Q Consensus       413 a~n~  416 (615)
                      +.+.
T Consensus        89 ~~~~   92 (143)
T 3u6r_L           89 QRSD   92 (143)
T ss_dssp             ECSS
T ss_pred             EecC
Confidence            7764

>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*

Probab=94.40  E-value=0.042  Score=46.98  Aligned_cols=67  Identities=19%  Similarity=0.221  Sum_probs=47.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---C---ceeecC-C----------CCceEEecC--CeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---G---EVSIDG-S----------DGHYKLTLD--GVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~---~~~l~~-~----------~g~~~~~~~--gsl~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|...+.+.+.|.|.+   +   ..++.. .          .+++.+..+  .+|+|.++...|+|.|
T Consensus        10 ~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L~I~~~~~~Dsg~Y   89 (112)
T 1fo0_B           10 WRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTL   89 (112)
T ss_dssp             EEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEESCCSCEEE
T ss_pred             eEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeEEEcCCCHhHCEEE
Confidence            3567899999999998777778999954   1   122211 1          145544321  1899999999999999


Q ss_pred             eecCCC
Q psy10163        410 VCVAAN  415 (615)
Q Consensus       410 ~C~a~n  415 (615)
                      .|...+
T Consensus        90 ~C~~~~   95 (112)
T 1fo0_B           90 YCTCSA   95 (112)
T ss_dssp             EEEEES
T ss_pred             EEEEEc
Confidence            998764

>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A

Probab=94.37  E-value=0.023  Score=55.01  Aligned_cols=67  Identities=27%  Similarity=0.448  Sum_probs=49.1

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCCc------eee--cC----------CCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSI--DG----------SDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l--~~----------~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .|.|.|.+..      .++  ..          ..+++.+..+     .+|.|.++...
T Consensus       137 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~  216 (247)
T 1svz_A          137 ELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNE  216 (247)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred             eeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChh
Confidence            3478899999999999985  6799996521      111  11          1356655432     37999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.|.
T Consensus       217 DsG~Y~C~a~n~  228 (247)
T 1svz_A          217 DTATYFCVRDRH  228 (247)
T ss_dssp             GCEEEEEEEEEG
T ss_pred             HCEEEEEEEecc
Confidence            999999999874

>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}

Probab=94.35  E-value=0.037  Score=54.06  Aligned_cols=69  Identities=19%  Similarity=0.216  Sum_probs=50.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeecCC----------CC-ceEEecCCe--EEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSIDGS----------DG-HYKLTLDGV--LQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~~~----------~g-~~~~~~~gs--l~I~~~~~~DsG~Y  409 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+.      ..++...          .+ ++.+..++.  |+|.++...|+|.|
T Consensus        10 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG~Y   89 (253)
T 3to4_D           10 WRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTL   89 (253)
T ss_dssp             EEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCEEE
T ss_pred             eEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCeEE
Confidence            45678999999999999999999999651      1111111          12 665555444  99999999999999


Q ss_pred             eecCCCCC
Q psy10163        410 VCVAANGI  417 (615)
Q Consensus       410 ~C~a~n~~  417 (615)
                      .|.+.+..
T Consensus        90 ~C~~~~~~   97 (253)
T 3to4_D           90 YCTSSADH   97 (253)
T ss_dssp             EEEEECSC
T ss_pred             EEEEecCC
Confidence            99987553

>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*

Probab=94.34  E-value=0.028  Score=49.38  Aligned_cols=68  Identities=24%  Similarity=0.286  Sum_probs=48.7

Q ss_pred             cccccCCCeeeeeeccc-------CCCCCeeeccCCc-------eeec-C--------CCCceEEecC-----CeEEEee
Q psy10163        349 TVEAEEGNFVTLRCIAI-------GYPIPVYTWSKGE-------VSID-G--------SDGHYKLTLD-----GVLQIVG  400 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-------G~P~P~i~w~k~~-------~~l~-~--------~~g~~~~~~~-----gsl~I~~  400 (615)
                      .+.+.+|+.++|.|...       ..+.+.|.|.+..       .++. .        ..+++.+..+     .+|.|.+
T Consensus        15 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~   94 (132)
T 1nko_A           15 SVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRD   94 (132)
T ss_dssp             EEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECS
T ss_pred             EEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcc
Confidence            46788999999999876       3456789996532       1221 1        1267766543     3799999


Q ss_pred             ccccCCceeeecCCCC
Q psy10163        401 LVRQDAGIYVCVAANG  416 (615)
Q Consensus       401 ~~~~DsG~Y~C~a~n~  416 (615)
                      +...|+|.|.|...++
T Consensus        95 v~~~DsG~Y~C~v~~~  110 (132)
T 1nko_A           95 ARMSDAGRYFFRMEKG  110 (132)
T ss_dssp             CCGGGCEEEEEEEEET
T ss_pred             cCcccCeeEEEEEEcC
Confidence            9999999999987654

>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*

Probab=94.34  E-value=0.022  Score=54.18  Aligned_cols=65  Identities=26%  Similarity=0.530  Sum_probs=45.6

Q ss_pred             ccCCCeeeeeecccCC-CCC-eeeccCCcee---ecC----CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PIP-VYTWSKGEVS---IDG----SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~P-~i~w~k~~~~---l~~----~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|. |.| .|+|.++...   ...    ..+.+..  .+.|.|......| |.|.|.+.|..|.
T Consensus       137 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~-g~Y~C~a~n~~~~  210 (220)
T 1pz5_B          137 DTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSL--SSLVTVPSSTWPS-QTVICNVAHPASK  210 (220)
T ss_dssp             CSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEE--EEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred             cCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEE--EEEEEEcchhcCC-ceEEEEEEECCcc
Confidence            4578899999999998 999 9999874321   000    0133322  3467777776645 9999999998875

>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*

Probab=94.34  E-value=0.05  Score=51.70  Aligned_cols=68  Identities=19%  Similarity=0.397  Sum_probs=49.7

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eee-c----------CCCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI-D----------GSDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l-~----------~~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++ .          ...+++.+..+     .+|.|.++...|
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D   89 (215)
T 1c5d_H           10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED   89 (215)
T ss_dssp             CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred             eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence            4577899999999999875  588999642   1   111 1          01356665532     379999999999


Q ss_pred             CceeeecCCCCC
Q psy10163        406 AGIYVCVAANGI  417 (615)
Q Consensus       406 sG~Y~C~a~n~~  417 (615)
                      +|.|.|.+.+..
T Consensus        90 ~G~Y~C~~~~~~  101 (215)
T 1c5d_H           90 TAIYFCTREDGW  101 (215)
T ss_dssp             CEEEEEEECCSS
T ss_pred             CEEEEEEEecCC
Confidence            999999988764

>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H

Probab=94.30  E-value=0.037  Score=53.02  Aligned_cols=69  Identities=22%  Similarity=0.358  Sum_probs=51.0

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceeec------------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSID------------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~------------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.      ..++.            .-.+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~   89 (223)
T 1dee_B           10 GVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE   89 (223)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             EEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence            5677899999999999876  588999642      11211            11367766542     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..|
T Consensus        90 D~G~Y~C~~~~~~~  103 (223)
T 1dee_B           90 DTAVYYCAKVKFYD  103 (223)
T ss_dssp             GCEEEEEEEESSSS
T ss_pred             HCEEEEEEEecccc
Confidence            99999999887653

>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}

Probab=94.30  E-value=0.023  Score=56.60  Aligned_cols=68  Identities=15%  Similarity=0.361  Sum_probs=51.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCc------eee--c----------CCCCceEEecC----CeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE------VSI--D----------GSDGHYKLTLD----GVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~------~~l--~----------~~~g~~~~~~~----gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+.|.+.|.|.+..      .++  .          ...+++.+..+    .+|.|.++...|+
T Consensus        33 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~  112 (279)
T 2wbj_D           33 WVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS  112 (279)
T ss_dssp             EEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGC
T ss_pred             eEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCC
Confidence            467889999999999999999999996521      111  0          01356665532    3799999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      |.|.|.+.+.
T Consensus       113 G~Y~C~~~~~  122 (279)
T 2wbj_D          113 SFYICSARDL  122 (279)
T ss_dssp             EEEEEEEEET
T ss_pred             EEEEEEEccc
Confidence            9999998874

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=94.29  E-value=0.015  Score=58.60  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=43.1

Q ss_pred             cccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---CeEEEeeccccCCceeeecCCCCCCc----cccc
Q psy10163        351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GVLQIVGLVRQDAGIYVCVAANGIGD----PIRK  423 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~a~n~~G~----p~~~  423 (615)
                      .+.+|+.++|.|.+. .|.+.+.|.|+...+............   +.|.|..+.  |+|.|.|.+.|..+.    ....
T Consensus       229 ~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~  305 (316)
T 3vh8_G          229 KVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSD  305 (316)
T ss_dssp             CCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCC
T ss_pred             eecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCC
Confidence            457899999999987 578899997643222110000011111   367777777  999999999987653    2344


Q ss_pred             ceeeeecc
Q psy10163        424 EFNVIVRG  431 (615)
Q Consensus       424 ~~~l~V~~  431 (615)
                      .+.|.|.+
T Consensus       306 ~~~l~V~g  313 (316)
T 3vh8_G          306 PLLVSVTG  313 (316)
T ss_dssp             CEEC----
T ss_pred             cEEEEEeC
Confidence            45555543

>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}

Probab=94.28  E-value=0.036  Score=48.84  Aligned_cols=70  Identities=23%  Similarity=0.358  Sum_probs=49.7

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccC---C---ceeec--C------CCCceEEec-----CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSK---G---EVSID--G------SDGHYKLTL-----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k---~---~~~l~--~------~~g~~~~~~-----~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+.+ ...|.|.+   +   ..++.  .      ..+++.+..     ..+|+|.++...|+|.
T Consensus        10 ~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~   89 (129)
T 3rrq_A           10 LLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGT   89 (129)
T ss_dssp             EEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEE
T ss_pred             EEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEE
Confidence            46788999999999998775 56799953   1   11221  1      135676652     2369999999999999


Q ss_pred             eeecCCCCCC
Q psy10163        409 YVCVAANGIG  418 (615)
Q Consensus       409 Y~C~a~n~~G  418 (615)
                      |.|.+.+..+
T Consensus        90 Y~C~~~~~~~   99 (129)
T 3rrq_A           90 YLCGAISLAP   99 (129)
T ss_dssp             EEEEEEECGG
T ss_pred             EEEEEEecCC
Confidence            9999877644

>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*

Probab=94.26  E-value=0.05  Score=47.01  Aligned_cols=67  Identities=24%  Similarity=0.365  Sum_probs=48.3

Q ss_pred             ccccCCCeeeeeecccCCC---CCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCCceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYP---IPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P---~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~  410 (615)
                      +.+.+|+.++|.|.+.+.+   .+.|.|.+.      ..++.       ...+++.+...   .+|.|.++...|+|.|.
T Consensus        10 ~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~   89 (120)
T 1oaq_L           10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYF   89 (120)
T ss_dssp             EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred             EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEEE
Confidence            6788999999999988776   678999541      12221       11356654432   27999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+.+.
T Consensus        90 C~~~~~   95 (120)
T 1oaq_L           90 CALWYS   95 (120)
T ss_dssp             EEEEET
T ss_pred             EEEccC
Confidence            987654

>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}

Probab=94.21  E-value=0.015  Score=53.99  Aligned_cols=72  Identities=21%  Similarity=0.332  Sum_probs=49.9

Q ss_pred             CcccccCCCeeeeeecccCCCCCe---eeccCCcee------e--c---------CCCCceEEe------cCCeEEEeec
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPV---YTWSKGEVS------I--D---------GSDGHYKLT------LDGVLQIVGL  401 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~---i~w~k~~~~------l--~---------~~~g~~~~~------~~gsl~I~~~  401 (615)
                      ..+.+.+|+.++|.|.+.+.|.|.   |.|.|....      +  .         .-.+++.+.      .+++|.|.++
T Consensus         7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v   86 (218)
T 4frw_A            7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA   86 (218)
T ss_dssp             SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred             CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence            346788999999999999998764   899652110      0  0         011233222      2347999999


Q ss_pred             cccCCceeeecCCCCCCc
Q psy10163        402 VRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       402 ~~~DsG~Y~C~a~n~~G~  419 (615)
                      ...|+|.|.|.+.+..+.
T Consensus        87 ~~~D~G~Y~C~~~~~~~~  104 (218)
T 4frw_A           87 VQADEGEYECRVSTFPAG  104 (218)
T ss_dssp             CGGGCEEEEEEEEEETTE
T ss_pred             cHHHCCceeEEEEeccCc
Confidence            999999999998765554

>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=94.17  E-value=0.032  Score=53.61  Aligned_cols=66  Identities=32%  Similarity=0.535  Sum_probs=48.5

Q ss_pred             ccccCCCeeeeeecccCCCC--CeeeccCC---cee-----ec----------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI--PVYTWSKG---EVS-----ID----------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~--P~i~w~k~---~~~-----l~----------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|.  +.|.|.+.   ...     +.          ...+++.+..+     .+|.|.++...
T Consensus       129 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~  208 (240)
T 1moe_A          129 ELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE  208 (240)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHH
Confidence            46778999999999999884  59999762   111     01          01345655533     37999999999


Q ss_pred             CCceeeecCCC
Q psy10163        405 DAGIYVCVAAN  415 (615)
Q Consensus       405 DsG~Y~C~a~n  415 (615)
                      |+|.|.|.+..
T Consensus       209 D~G~Y~C~a~~  219 (240)
T 1moe_A          209 DTAVYYCAPFG  219 (240)
T ss_dssp             GCEEEEEEECS
T ss_pred             HCEEEEEEEEe
Confidence            99999999874

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=94.17  E-value=0.015  Score=66.47  Aligned_cols=77  Identities=26%  Similarity=0.408  Sum_probs=55.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeee-cc--CCceeecCCCCceEEe----cCCeEEEeeccccCCceeeecCCCCCCccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYT-WS--KGEVSIDGSDGHYKLT----LDGVLQIVGLVRQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~-w~--k~~~~l~~~~g~~~~~----~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~  421 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|. |.  ++...+...  .....    ..++|.|.++.+.|.|.|.|.|.|..|...
T Consensus       173 ~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~--~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~  250 (731)
T 2v5y_A          173 NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK--EIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI  250 (731)
T ss_dssp             CEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE--EEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEE
T ss_pred             ceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc--ceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcc
Confidence            4667899999999999999999998 76  443333211  11111    125899999999999999999999988633


Q ss_pred             ccceee
Q psy10163        422 RKEFNV  427 (615)
Q Consensus       422 ~~~~~l  427 (615)
                      ...+.|
T Consensus       251 s~~~~l  256 (731)
T 2v5y_A          251 SNYAEL  256 (731)
T ss_dssp             CCCEEE
T ss_pred             eeeEEE
Confidence            333333

>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}

Probab=94.15  E-value=0.037  Score=54.16  Aligned_cols=70  Identities=20%  Similarity=0.307  Sum_probs=49.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec----------CCCCceEEec----CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID----------GSDGHYKLTL----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~----------~~~g~~~~~~----~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+. .|.|.|.+.      ..++.          ...+++.+..    ..+|.|.++...|+|.
T Consensus       146 ~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~  224 (256)
T 3tf7_C          146 NKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSL  224 (256)
T ss_dssp             EEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred             EEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEE
Confidence            3556789999999999987 789999651      11110          0123343332    2379999999999999


Q ss_pred             eeecCCCCCCc
Q psy10163        409 YVCVAANGIGD  419 (615)
Q Consensus       409 Y~C~a~n~~G~  419 (615)
                      |.|.+.|..|.
T Consensus       225 Y~C~a~n~~g~  235 (256)
T 3tf7_C          225 YFCASSDAPGQ  235 (256)
T ss_dssp             EEEEEEEETTE
T ss_pred             EEEEecCCCCc
Confidence            99999887553

>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*

Probab=94.13  E-value=0.031  Score=54.08  Aligned_cols=75  Identities=24%  Similarity=0.480  Sum_probs=43.7

Q ss_pred             cCCCeeeeeecccC-CCCC-eeeccCCce----------------eecCCCCceEEecCCeEEEeeccccCCceeeecCC
Q psy10163        353 EEGNFVTLRCIAIG-YPIP-VYTWSKGEV----------------SIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       353 ~eg~~~tl~C~~~G-~P~P-~i~w~k~~~----------------~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+|+.++|.|.+.| .|.| .|.|.++..                +.....+.+..  ...|.|......|.|.|.|.+.
T Consensus       131 ~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~YtC~a~  208 (248)
T 3pv7_A          131 MKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNV--TSCLKLNSSQEDPGTVYQCVVR  208 (248)
T ss_dssp             -----CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEE--EEEEECC--CCCTTCEEEEEEE
T ss_pred             ccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEE--EEEEEEcCccccCCCEEEEEEE
Confidence            35667889999999 8999 999987431                11112233322  1245666667788889999999


Q ss_pred             CCCCc-ccccceeeee
Q psy10163        415 NGIGD-PIRKEFNVIV  429 (615)
Q Consensus       415 n~~G~-p~~~~~~l~V  429 (615)
                      |..+. +....+.|.|
T Consensus       209 n~~~~~~~~~~v~l~V  224 (248)
T 3pv7_A          209 HASLHTPLRSNFTLTA  224 (248)
T ss_dssp             CTTCSSCEEEEECC--
T ss_pred             CCCCCCCcEEEEEEEE
Confidence            98765 3444555555

>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}

Probab=94.00  E-value=0.039  Score=54.73  Aligned_cols=69  Identities=23%  Similarity=0.341  Sum_probs=51.6

Q ss_pred             cccccCCCeeeeeecccCCC--CCeeeccCC---c---eee--cC----------CCCceEEec-----CCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI--DG----------SDGHYKLTL-----DGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l--~~----------~~g~~~~~~-----~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++  ..          ..+++.+..     ..+|+|.++..
T Consensus        15 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~   94 (261)
T 2xqy_G           15 AELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTS   94 (261)
T ss_dssp             EEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred             CEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCc
Confidence            45678999999999999887  689999642   1   111  10          136776654     24799999999


Q ss_pred             cCCceeeecCCCCC
Q psy10163        404 QDAGIYVCVAANGI  417 (615)
Q Consensus       404 ~DsG~Y~C~a~n~~  417 (615)
                      .|+|.|.|.+.+..
T Consensus        95 ~DsG~Y~C~~~~~~  108 (261)
T 2xqy_G           95 EDSAVYYCGRLGYV  108 (261)
T ss_dssp             GGCEEEEEEEECTT
T ss_pred             ccCeEEEEEEecCC
Confidence            99999999988764

>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C

Probab=93.96  E-value=0.039  Score=54.54  Aligned_cols=67  Identities=24%  Similarity=0.403  Sum_probs=49.4

Q ss_pred             ccccCCCeeeeeecccCCCC--CeeeccCC------ceeec--C----------CCCceEEec-----CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPI--PVYTWSKG------EVSID--G----------SDGHYKLTL-----DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~--P~i~w~k~------~~~l~--~----------~~g~~~~~~-----~gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|.  |.|.|.+.      ..++.  .          ..+++.+..     ..+|.|.++...
T Consensus       148 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~  227 (264)
T 2gjj_A          148 EVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSE  227 (264)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             EEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcc
Confidence            35778999999999999874  89999652      11221  1          135555442     347999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.|.
T Consensus       228 DsG~Y~C~a~n~  239 (264)
T 2gjj_A          228 DSADYYCVRSGN  239 (264)
T ss_dssp             GCEEEEEEEECS
T ss_pred             cCEEEEEEEecC
Confidence            999999999885

>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L

Probab=93.92  E-value=0.073  Score=47.47  Aligned_cols=67  Identities=24%  Similarity=0.370  Sum_probs=48.4

Q ss_pred             ccccCCCeeeeeecccCCC---CCeeeccCC------ceeec-------CCCCceEEecC---CeEEEeeccccCCceee
Q psy10163        350 VEAEEGNFVTLRCIAIGYP---IPVYTWSKG------EVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P---~P~i~w~k~------~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~  410 (615)
                      +.+.+|+.++|.|.+...+   .+.|.|.+.      ..++.       ...+++.+...   -+|+|.++...|+|.|.
T Consensus        15 v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y~   94 (135)
T 1p4b_L           15 LTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYF   94 (135)
T ss_dssp             EEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred             EEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEEE
Confidence            6788999999999988775   578999542      12221       11356655432   27999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+.+.
T Consensus        95 C~~~~~  100 (135)
T 1p4b_L           95 CALWYS  100 (135)
T ss_dssp             EEEECS
T ss_pred             EEEecC
Confidence            987653

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=93.91  E-value=0.029  Score=56.52  Aligned_cols=63  Identities=17%  Similarity=0.191  Sum_probs=46.2

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCC
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      ..+.+|+.++|.|.+.+. .+.+.|.|+...+..  ........+.|.|.++...|+|.|.|.+.+
T Consensus        33 ~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~   95 (316)
T 3vh8_G           33 AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIP--IFHGRIFQESFNMSPVTTAHAGNYTCRGSH   95 (316)
T ss_dssp             SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSC--HHHHCCBSSCEEECSCCGGGCEEEEEEEBC
T ss_pred             CccCCCCCEEEEEEccCC-CceEEEEeCCCccce--eecCCcceEEEEECCCCcccCeEEEEEEEc
Confidence            456799999999999998 688999874432211  011122356899999999999999998764

>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}

Probab=93.90  E-value=0.022  Score=54.52  Aligned_cols=66  Identities=11%  Similarity=0.101  Sum_probs=48.1

Q ss_pred             ccCCCeeeeeecccCC---C-CCeeeccCCceeecC---------CCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        352 AEEGNFVTLRCIAIGY---P-IPVYTWSKGEVSIDG---------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~---P-~P~i~w~k~~~~l~~---------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+|+.++|.|.+.|.   | .|.|.|.++...+..         ..+++.  ....|.|..+...|+|.|.|.+.+..+
T Consensus        23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~~~~~D~g~Y~C~~~~~~~  100 (218)
T 2rgs_A           23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIR--VVSTLPIQHQDWMSGKEFKCKVNNKDL  100 (218)
T ss_dssp             HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEE--EEEEEECCHHHHHTTCCEEEEEEETTC
T ss_pred             hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEE--EEEEEEEcHHHcCCCCeEEEEEECCcC
Confidence            6789999999999987   4 489999875433321         112222  234688889999999999999988765


Q ss_pred             c
Q psy10163        419 D  419 (615)
Q Consensus       419 ~  419 (615)
                      .
T Consensus       101 ~  101 (218)
T 2rgs_A          101 P  101 (218)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*

Probab=93.86  E-value=0.065  Score=45.76  Aligned_cols=67  Identities=12%  Similarity=0.298  Sum_probs=48.6

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCCc---------eee--cC----------CCCceEEec--C---CeEEEeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKGE---------VSI--DG----------SDGHYKLTL--D---GVLQIVGL  401 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~---------~~l--~~----------~~g~~~~~~--~---gsl~I~~~  401 (615)
                      .+.+.+|+.++|.|.+.+. +.+.|.|.+..         .++  ..          ..+++.+..  .   .+|+|.++
T Consensus         7 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~   86 (115)
T 2atp_B            7 SLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNV   86 (115)
T ss_dssp             EEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSC
T ss_pred             CEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEECCC
Confidence            3567899999999998865 57789996522         121  11          136776654  2   27999999


Q ss_pred             cccCCceeeecCCC
Q psy10163        402 VRQDAGIYVCVAAN  415 (615)
Q Consensus       402 ~~~DsG~Y~C~a~n  415 (615)
                      ...|+|.|.|.+..
T Consensus        87 ~~~DsG~Y~C~~~~  100 (115)
T 2atp_B           87 KPEDSDFYFCATVG  100 (115)
T ss_dssp             CGGGCEEEEEEEEC
T ss_pred             CHHHCEEEEEeEcc
Confidence            99999999998653

>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B

Probab=93.83  E-value=0.095  Score=49.72  Aligned_cols=67  Identities=24%  Similarity=0.418  Sum_probs=49.1

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceee--c------------CCCCceEEecCC-----eEEEeecc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSI--D------------GSDGHYKLTLDG-----VLQIVGLV  402 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l--~------------~~~g~~~~~~~g-----sl~I~~~~  402 (615)
                      +.+.+|+.++|.|.+.+.+  .+.|.|.+.      ..++  .            .-.+++.+..++     +|.|.++.
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~   89 (221)
T 3m8o_H           10 GLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK   89 (221)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC
T ss_pred             EEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC
Confidence            5677899999999998754  678999541      1111  0            013677665443     59999999


Q ss_pred             ccCCceeeecCCCC
Q psy10163        403 RQDAGIYVCVAANG  416 (615)
Q Consensus       403 ~~DsG~Y~C~a~n~  416 (615)
                      ..|+|.|.|.+.+.
T Consensus        90 ~~DsG~Y~C~~~~~  103 (221)
T 3m8o_H           90 SDDTAMYYCVIRGD  103 (221)
T ss_dssp             GGGCEEEEEEEESC
T ss_pred             HHHCEEEEEEEECC
Confidence            99999999998775

>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H

Probab=93.83  E-value=0.082  Score=51.00  Aligned_cols=66  Identities=15%  Similarity=0.304  Sum_probs=48.6

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceeec-----------CCCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSID-----------GSDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~-----------~~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.      ..++.           .-.+++.+..+     .+|.|.++...|
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D   89 (232)
T 1dn0_B           10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD   89 (232)
T ss_dssp             CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred             EEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence            4677899999999998876  688999541      12211           11367766532     279999999999


Q ss_pred             CceeeecCCC
Q psy10163        406 AGIYVCVAAN  415 (615)
Q Consensus       406 sG~Y~C~a~n  415 (615)
                      +|.|.|.+.+
T Consensus        90 ~G~Y~C~~~~   99 (232)
T 1dn0_B           90 TAVYYCARPP   99 (232)
T ss_dssp             CEEEEEEECS
T ss_pred             CEEEEEEEec
Confidence            9999999873

>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*

Probab=93.80  E-value=0.036  Score=52.11  Aligned_cols=64  Identities=14%  Similarity=0.325  Sum_probs=45.1

Q ss_pred             cCCCeeeeeecccC-CCCC-eeeccCCceeecCC-----------CCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        353 EEGNFVTLRCIAIG-YPIP-VYTWSKGEVSIDGS-----------DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       353 ~eg~~~tl~C~~~G-~P~P-~i~w~k~~~~l~~~-----------~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+|+.++|.|.+.| .|.| .|.|.++...+...           ++.+.  ....|.|..+...|+|.|.|.+.|...
T Consensus       124 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d~G~Y~C~a~n~~~  200 (210)
T 1lk3_L          124 LATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYS--MSSTLSLTKADYESHNLYTCEVVHKTS  200 (210)
T ss_dssp             HTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEE--EEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred             ccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEE--EEEEEEEChHHhccCCcEEEEEEecCC
Confidence            36889999999997 4554 89998755443211           12221  113688889999999999999988644

>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1

Probab=93.79  E-value=0.042  Score=47.07  Aligned_cols=68  Identities=18%  Similarity=0.247  Sum_probs=48.3

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCC------ceeec--C--------CCCceEEec-----CCeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKG------EVSID--G--------SDGHYKLTL-----DGVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~------~~~l~--~--------~~g~~~~~~-----~gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|.+.+. +.+.|.|.+.      ..++.  .        ..+++.+..     ..+|+|.++...|+
T Consensus         9 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds   88 (116)
T 1tvd_A            9 DQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDS   88 (116)
T ss_dssp             CEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGC
T ss_pred             cEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHC
Confidence            3567899999999998765 5678999541      11221  0        146666543     22799999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      |.|.|.+.+.
T Consensus        89 G~Y~C~~~~~   98 (116)
T 1tvd_A           89 ATYYCAFTLP   98 (116)
T ss_dssp             EEEEEEEECT
T ss_pred             EEEEEEEeCC
Confidence            9999987663

>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2

Probab=93.74  E-value=0.065  Score=56.70  Aligned_cols=67  Identities=25%  Similarity=0.354  Sum_probs=49.8

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---ce---eecC------------CCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---EV---SIDG------------SDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~~---~l~~------------~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.+  .+.|.|.+.   ..   ++..            ..+++.+..+     .+|.|.++...
T Consensus         9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   88 (434)
T 1igy_B            9 ELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSD   88 (434)
T ss_dssp             CEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGG
T ss_pred             eEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChH
Confidence            5677899999999999875  778999652   11   1110            1356666543     37999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.+.
T Consensus        89 D~G~Y~C~~~~~  100 (434)
T 1igy_B           89 DSAVYYCVREGE  100 (434)
T ss_dssp             GCSEECCCCSSS
T ss_pred             HCEEEEEEEEcc
Confidence            999999999874

>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A

Probab=93.71  E-value=0.081  Score=44.95  Aligned_cols=66  Identities=21%  Similarity=0.374  Sum_probs=48.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-C------CCCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-G------SDGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-~------~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.+.+.+.+.|.|.+.      ..++. .      ..+++.+..     ..+|+|.++...|+|.|.
T Consensus         9 ~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~   88 (112)
T 2z35_A            9 QVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYY   88 (112)
T ss_dssp             EEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEE
T ss_pred             cEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEE
Confidence            46788999999999988877889999541      12221 1      125665532     237999999999999999


Q ss_pred             ecCC
Q psy10163        411 CVAA  414 (615)
Q Consensus       411 C~a~  414 (615)
                      |.+.
T Consensus        89 C~~~   92 (112)
T 2z35_A           89 CALS   92 (112)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9875

>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2

Probab=93.69  E-value=0.031  Score=54.27  Aligned_cols=68  Identities=18%  Similarity=0.412  Sum_probs=50.7

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCC------ceee--c---------C-CCCceEEec-----CCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSI--D---------G-SDGHYKLTL-----DGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l--~---------~-~~g~~~~~~-----~gsl~I~~~~~  403 (615)
                      .+.+.+|+.++|.|.+.+.  +.+.|.|.+.      ..++  .         . ..+++.+..     ..+|.|.++..
T Consensus        10 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~   89 (242)
T 1hxm_B           10 SSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEK   89 (242)
T ss_dssp             EEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCG
T ss_pred             eEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCc
Confidence            4678899999999999886  6789999652      1121  0         0 346776653     34799999999


Q ss_pred             cCCceeeecCCCC
Q psy10163        404 QDAGIYVCVAANG  416 (615)
Q Consensus       404 ~DsG~Y~C~a~n~  416 (615)
                      .|+|.|.|.+.+.
T Consensus        90 ~D~G~Y~C~~~~~  102 (242)
T 1hxm_B           90 QDIATYYCALWEA  102 (242)
T ss_dssp             GGCEEEEEEEEEE
T ss_pred             ccCEEEEEeeecC
Confidence            9999999998764

>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A

Probab=93.66  E-value=0.026  Score=53.50  Aligned_cols=66  Identities=9%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             ccCCCeeeeeecccCCC---C-CeeeccCCceeecC---------CCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        352 AEEGNFVTLRCIAIGYP---I-PVYTWSKGEVSIDG---------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P---~-P~i~w~k~~~~l~~---------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +.+|+.++|.|.+.|.|   . +.|.|.++...+..         ..+++.  ....|.|.++...|+|.|.|.+.+..+
T Consensus        15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~a~~~~~   92 (207)
T 2vol_A           15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFR--SVSELPIMHQDWLNGKEFKCRVNSAAF   92 (207)
T ss_dssp             HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEE--EEEEEECCHHHHHTTCCEEEEEECTTC
T ss_pred             hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEE--EEEEEEEehhHcCCCCEEEEEEEccCC
Confidence            67899999999999884   2 48999775433311         112222  224688889999999999999998877


Q ss_pred             c
Q psy10163        419 D  419 (615)
Q Consensus       419 ~  419 (615)
                      .
T Consensus        93 ~   93 (207)
T 2vol_A           93 P   93 (207)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...

Probab=93.56  E-value=0.036  Score=52.33  Aligned_cols=63  Identities=17%  Similarity=0.364  Sum_probs=44.4

Q ss_pred             CCCeeeeeecccC-CCCC-eeeccCCceeecCC-----------CCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        354 EGNFVTLRCIAIG-YPIP-VYTWSKGEVSIDGS-----------DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       354 eg~~~tl~C~~~G-~P~P-~i~w~k~~~~l~~~-----------~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +|+.++|.|.+.| .|.| .|+|.++...+...           +|.|..  ...|.|..+...|.|.|.|.+.|...
T Consensus       128 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~g~Y~C~a~n~~~  203 (216)
T 2xzc_L          128 KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSL--SSTLTLSKADYEKHKVYACEVTHQGL  203 (216)
T ss_dssp             HTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEE--EEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred             cCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEE--EEEEEECHHHhCCCCcEEEEEEcCCC
Confidence            5789999999998 5665 89998755443211           122211  12578888888999999999998643

>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*

Probab=93.56  E-value=0.041  Score=47.26  Aligned_cols=67  Identities=25%  Similarity=0.385  Sum_probs=48.0

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccCC------ceee--c-C-----CCCceEEec-----CCeEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSKG------EVSI--D-G-----SDGHYKLTL-----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k~------~~~l--~-~-----~~g~~~~~~-----~gsl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|.+.+. +.+.|.|.+.      ..++  . .     ..+++.+..     ..+|+|.++...|+|.
T Consensus         9 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~   88 (116)
T 1fo0_A            9 SISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAV   88 (116)
T ss_dssp             EEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred             cEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEE
Confidence            4678899999999998877 6668999541      1222  1 0     125666532     1269999999999999


Q ss_pred             eeecCCC
Q psy10163        409 YVCVAAN  415 (615)
Q Consensus       409 Y~C~a~n  415 (615)
                      |.|.+.+
T Consensus        89 Y~C~~~~   95 (116)
T 1fo0_A           89 YFCAMRG   95 (116)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEc
Confidence            9998765

>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1

Probab=93.53  E-value=0.066  Score=45.79  Aligned_cols=71  Identities=21%  Similarity=0.301  Sum_probs=49.3

Q ss_pred             CcccccCCCeeeeeecccCCC--CCeeeccCC------ceeecCC----------CCceEEecC-----CeEEEeecccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSIDGS----------DGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l~~~----------~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      ..+.+.+|+.++|.|.+.+.+  ...|.|.+.      ..++...          .+++.+..+     -+|.|.++...
T Consensus         7 ~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~   86 (114)
T 1u9k_A            7 ERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQVT   86 (114)
T ss_dssp             EEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCCChH
Confidence            346788999999999987543  457999542      2222111          256655432     26999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|...+..+
T Consensus        87 Dsg~Y~C~~~~~~~  100 (114)
T 1u9k_A           87 DSGLYRCVIYHPPN  100 (114)
T ss_dssp             GCEEEEEEEECTTS
T ss_pred             HCEEEEEEEecCCC
Confidence            99999999777654

>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...

Probab=93.50  E-value=0.032  Score=52.58  Aligned_cols=65  Identities=26%  Similarity=0.499  Sum_probs=45.1

Q ss_pred             ccCCCeeeeeecccCC-CCC-eeeccCCceeecC-------CCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        352 AEEGNFVTLRCIAIGY-PIP-VYTWSKGEVSIDG-------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~-P~P-~i~w~k~~~~l~~-------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      +.+|+.++|.|.+.|. |.| .|.|.++...+..       ..+.+.  ....|.|......| |.|.|.+.|..|.
T Consensus       130 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~-g~Y~C~a~n~~~~  203 (210)
T 3d9a_H          130 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASS  203 (210)
T ss_dssp             CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEE--EEEEEEEEGGGTTT-SCCEEEEEEGGGT
T ss_pred             cccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEE--EEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence            4578999999999997 999 9999874332110       012221  22357777776655 9999999998775

>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}

Probab=93.47  E-value=0.047  Score=54.49  Aligned_cols=68  Identities=21%  Similarity=0.291  Sum_probs=48.5

Q ss_pred             ccccCCCeeeeeecccC-CC-CCeeeccCC------ceeec-------CCCCceEEecCC---eEEEeeccccCCceeee
Q psy10163        350 VEAEEGNFVTLRCIAIG-YP-IPVYTWSKG------EVSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-~P-~P~i~w~k~------~~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C  411 (615)
                      +.+.+|+.++|.|.+.+ .+ .+.|.|.+.      ..++.       ...+++....++   +|.|.++...|+|.|.|
T Consensus       149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C  228 (280)
T 3fku_X          149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYC  228 (280)
T ss_dssp             EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEE
T ss_pred             EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEE
Confidence            67889999999999998 44 488999541      11110       112455544333   49999999999999999


Q ss_pred             cCCCCC
Q psy10163        412 VAANGI  417 (615)
Q Consensus       412 ~a~n~~  417 (615)
                      .+.+..
T Consensus       229 ~~~~~~  234 (280)
T 3fku_X          229 STWDSS  234 (280)
T ss_dssp             EEEETT
T ss_pred             EEecCC
Confidence            987764

>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E

Probab=93.46  E-value=0.055  Score=53.61  Aligned_cols=69  Identities=20%  Similarity=0.367  Sum_probs=51.3

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCCc------eee--c----------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKGE------VSI--D----------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~~------~~l--~----------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+..      .++  .          ...+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~   89 (257)
T 3bn9_D           10 GLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE   89 (257)
T ss_dssp             EEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred             EEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence            4677899999999999876  6889995421      111  0          01367766542     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..|
T Consensus        90 DsG~Y~C~~~~~~g  103 (257)
T 3bn9_D           90 DTAVYYCARPYLTY  103 (257)
T ss_dssp             GCEEEEEEEECCSS
T ss_pred             hCEEEEEEEecCCC
Confidence            99999999988765

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=93.42  E-value=0.087  Score=52.80  Aligned_cols=66  Identities=24%  Similarity=0.412  Sum_probs=45.9

Q ss_pred             cccccCCCeeeeeecccCCCCCe-----eeccCCce-----eec-------CCCCceEEe--------cCCeEEEeeccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPV-----YTWSKGEV-----SID-------GSDGHYKLT--------LDGVLQIVGLVR  403 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~-----i~w~k~~~-----~l~-------~~~g~~~~~--------~~gsl~I~~~~~  403 (615)
                      .+.+..|+.++|.|.+.+.|.|.     |.|.|...     ++.       ....++.+.        .+.+|.|.++..
T Consensus         9 ~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~   88 (313)
T 4fqp_A            9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV   88 (313)
T ss_dssp             EECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCG
T ss_pred             EEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCCh
Confidence            45677899999999999888773     88976321     111       112233222        235799999999


Q ss_pred             cCCceeeecCC
Q psy10163        404 QDAGIYVCVAA  414 (615)
Q Consensus       404 ~DsG~Y~C~a~  414 (615)
                      .|+|.|.|.+.
T Consensus        89 ~D~G~Y~C~v~   99 (313)
T 4fqp_A           89 EDEGNYTCLFV   99 (313)
T ss_dssp             GGCEEEEEEEE
T ss_pred             hhCEEEEEEEe
Confidence            99999999753

>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N

Probab=93.42  E-value=0.057  Score=47.16  Aligned_cols=65  Identities=28%  Similarity=0.486  Sum_probs=46.9

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCC------ceeecCCCCceEEec-----CCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSIDGSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l~~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.+.  +.+.|.|.+.      ..++ ...+++.+..     ..+|.|.++...|+|.|.|.+.
T Consensus         9 ~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~   86 (121)
T 2i24_N            9 RITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESI-SDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPE   86 (121)
T ss_dssp             EEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEE-CSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred             EEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeE-ecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEe
Confidence            3567899999999998765  3568999542      1122 2346665432     2379999999999999999865

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A

Probab=93.41  E-value=0.058  Score=50.57  Aligned_cols=54  Identities=15%  Similarity=0.179  Sum_probs=39.5

Q ss_pred             eeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        357 FVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       357 ~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .++|.|.+.+.|.|.|.|.++...+..        ....+.+ .....|+|.|.|.|.|.++.
T Consensus       117 ~v~L~C~~~~~p~~~~~W~~~g~~l~~--------~~~~i~~-~~~~~d~G~Y~C~a~N~~~~  170 (182)
T 1hnf_A          117 NTTLTCEVMNGTDPELNLYQDGKHLKL--------SQRVITH-KWTTSLSAKFKCTAGNKVSK  170 (182)
T ss_dssp             TTEEEEECSSCSSCEEEEEESSCEEEE--------ESSCEEE-ECCSCEEEEEEEEEECSSCE
T ss_pred             cEEEEeEccCCCCCEEEEEECCEECCC--------CCcEEEE-ecccCCCcEEEEEEEeCCCC
Confidence            689999999999999999875444311        1122322 22468999999999999887

>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*

Probab=93.39  E-value=0.063  Score=57.22  Aligned_cols=69  Identities=20%  Similarity=0.347  Sum_probs=51.9

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eee--c----------CCCCceEEecC-----CeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI--D----------GSDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l--~----------~~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++  .          ...+++.+..+     .+|.|.++...
T Consensus        10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (457)
T 1hzh_H           10 EVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA   89 (457)
T ss_dssp             EEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             eEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcc
Confidence            5678999999999999887  788999641   1   111  0          12367766543     37999999999


Q ss_pred             CCceeeecCCCCCC
Q psy10163        405 DAGIYVCVAANGIG  418 (615)
Q Consensus       405 DsG~Y~C~a~n~~G  418 (615)
                      |+|.|.|.+.+..|
T Consensus        90 D~G~Y~C~~~~~~~  103 (457)
T 1hzh_H           90 DTAVYYCARVGPYS  103 (457)
T ss_dssp             GCEEEEEEECCCCC
T ss_pred             cCEEEEEEEecCCc
Confidence            99999999987754

>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}

Probab=93.34  E-value=0.044  Score=54.05  Aligned_cols=66  Identities=26%  Similarity=0.511  Sum_probs=49.2

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC---c---eee--------------cCCCCceEEecC-----CeEEEeecc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG---E---VSI--------------DGSDGHYKLTLD-----GVLQIVGLV  402 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~---~---~~l--------------~~~~g~~~~~~~-----gsl~I~~~~  402 (615)
                      +.+.+|+.++|.|.+.+.|  .+.|.|.+.   .   .++              ....+++.+..+     .+|.|.++.
T Consensus       161 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~  240 (268)
T 1x9q_A          161 GLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLR  240 (268)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred             eEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence            4677899999999999886  389999652   1   111              113466766532     479999999


Q ss_pred             ccCCceeeecCCC
Q psy10163        403 RQDAGIYVCVAAN  415 (615)
Q Consensus       403 ~~DsG~Y~C~a~n  415 (615)
                      ..|+|.|.|.+.+
T Consensus       241 ~~DsG~Y~C~a~~  253 (268)
T 1x9q_A          241 VEDTGIYYCTGAS  253 (268)
T ss_dssp             GGGCEEEEEEEEE
T ss_pred             HHHCEEEEEEEcc
Confidence            9999999999875

>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H

Probab=93.16  E-value=0.073  Score=52.05  Aligned_cols=81  Identities=21%  Similarity=0.372  Sum_probs=0.0

Q ss_pred             CcccccCCCeeeeeecccC--CCCCeeeccCCc------------------eeecCCCCceEEecCCe-----EEEeecc
Q psy10163        348 PTVEAEEGNFVTLRCIAIG--YPIPVYTWSKGE------------------VSIDGSDGHYKLTLDGV-----LQIVGLV  402 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G--~P~P~i~w~k~~------------------~~l~~~~g~~~~~~~gs-----l~I~~~~  402 (615)
                      ..+.+.+|+.++|.|.+.+  .+.+.|.|.+..                  .......+++.+..++.     |+|.++.
T Consensus         8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~   87 (253)
T 3liz_H            8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK   87 (253)
T ss_dssp             CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred             CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC


Q ss_pred             ccCCceeeecCCCC----CCcccccceeeee
Q psy10163        403 RQDAGIYVCVAANG----IGDPIRKEFNVIV  429 (615)
Q Consensus       403 ~~DsG~Y~C~a~n~----~G~p~~~~~~l~V  429 (615)
                      ..|+|.|.|.+.+.    ... ......|.|
T Consensus        88 ~~DsG~Y~C~~~~~~~~~~~~-~~~~~~l~V  117 (253)
T 3liz_H           88 SEDTAMYYCTRDPAGRAWFAY-WGQGTLVTV  117 (253)
T ss_dssp             GGGCEEEEEEECCBTTTBCCE-ECCCEEEEE
T ss_pred             hhhCEEEEEEEecCCcceeeE-ECCCEEEEE

>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2

Probab=93.15  E-value=0.041  Score=52.35  Aligned_cols=68  Identities=24%  Similarity=0.336  Sum_probs=49.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCC------ceeec-----CCCCceEEecC------CeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKG------EVSID-----GSDGHYKLTLD------GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~------~~~l~-----~~~g~~~~~~~------gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|.+.+.+ +.|.|.+.      ..++.     ...+++.+..+      .+|.|.++...|+|.|.|
T Consensus        10 ~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C   88 (207)
T 1ypz_E           10 ALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFC   88 (207)
T ss_dssp             EEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEE
T ss_pred             eEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEE
Confidence            46788999999999988765 58999541      11211     12467766543      379999999999999999


Q ss_pred             cCCCCC
Q psy10163        412 VAANGI  417 (615)
Q Consensus       412 ~a~n~~  417 (615)
                      .+.+..
T Consensus        89 ~~~~~~   94 (207)
T 1ypz_E           89 AADTWH   94 (207)
T ss_dssp             EEECBC
T ss_pred             EEecCC
Confidence            987653

>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1

Probab=93.15  E-value=0.12  Score=44.07  Aligned_cols=66  Identities=21%  Similarity=0.423  Sum_probs=45.5

Q ss_pred             ccccCCCeeeeeecccCCC--CCeeeccCC------ceee--cC---------CCCceEEecC-----CeEEEeeccccC
Q psy10163        350 VEAEEGNFVTLRCIAIGYP--IPVYTWSKG------EVSI--DG---------SDGHYKLTLD-----GVLQIVGLVRQD  405 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P--~P~i~w~k~------~~~l--~~---------~~g~~~~~~~-----gsl~I~~~~~~D  405 (615)
                      +.+.+|+.++|.|.+.+.+  .+.|.|-+.      ..++  ..         ..+++.+..+     .+|.|.++...|
T Consensus        10 ~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D   89 (114)
T 1sjv_A           10 GLVQAGESLKLSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEPED   89 (114)
T ss_dssp             CCCCTTCCEEEEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCGGG
T ss_pred             EEEcCCCCEEEEEEEcCccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence            5677899999999987643  567999531      1221  11         1356766543     279999999999


Q ss_pred             CceeeecCCC
Q psy10163        406 AGIYVCVAAN  415 (615)
Q Consensus       406 sG~Y~C~a~n  415 (615)
                      +|.|.|...+
T Consensus        90 sG~Y~C~~~~   99 (114)
T 1sjv_A           90 TAVYYCYTHY   99 (114)
T ss_dssp             CSEEEEEECC
T ss_pred             CEEEEEeEEc
Confidence            9999998765

>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2

Probab=93.09  E-value=0.088  Score=50.72  Aligned_cols=68  Identities=16%  Similarity=0.312  Sum_probs=50.0

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccCC------ceeec---C--------CCCceEEecC-----CeEEEeecccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSKG------EVSID---G--------SDGHYKLTLD-----GVLQIVGLVRQ  404 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k~------~~~l~---~--------~~g~~~~~~~-----gsl~I~~~~~~  404 (615)
                      .+.+.+|+.++|.|.+.+.  +.+.|.|.+.      ..++.   .        ..+++.+..+     .+|.|.++...
T Consensus        10 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~   89 (230)
T 1ypz_F           10 SISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEE   89 (230)
T ss_dssp             EEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGG
T ss_pred             EEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChh
Confidence            4567899999999998875  6788999541      11211   0        2466766533     27999999999


Q ss_pred             CCceeeecCCCC
Q psy10163        405 DAGIYVCVAANG  416 (615)
Q Consensus       405 DsG~Y~C~a~n~  416 (615)
                      |+|.|.|.+.+.
T Consensus        90 D~G~Y~C~~~~~  101 (230)
T 1ypz_F           90 DEAIYYCSYGEG  101 (230)
T ss_dssp             GCSEEEEEECCT
T ss_pred             hCEEEEEEEECC
Confidence            999999998774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	615
d1dtxa_	59	g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendr	7e-19
d1dtxa_	59	g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendr	2e-17
d1dtxa_	59	g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendr	1e-11
d1aapa_	56	g.8.1.1 (A:) Alzheimer's amyloid B-protein precurs	9e-19
d1aapa_	56	g.8.1.1 (A:) Alzheimer's amyloid B-protein precurs	8e-18
d1aapa_	56	g.8.1.1 (A:) Alzheimer's amyloid B-protein precurs	3e-11
d1ktha_	58	g.8.1.1 (A:) Collagen type VI (domain C5 from alph	1e-18
d1ktha_	58	g.8.1.1 (A:) Collagen type VI (domain C5 from alph	7e-17
d1ktha_	58	g.8.1.1 (A:) Collagen type VI (domain C5 from alph	5e-11
d1g6xa_	58	g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {C	2e-18
d1g6xa_	58	g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {C	2e-17
d1g6xa_	58	g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {C	5e-11
d1dtka_	57	g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroasp	2e-18
d1dtka_	57	g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroasp	3e-16
d1dtka_	57	g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroasp	9e-12
d1bunb_	61	g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain	3e-18
d1bunb_	61	g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain	9e-17
d1bunb_	61	g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain	2e-11
d1irha_	61	g.8.1.1 (A:) Tissue factor pathway inhibitor {Huma	3e-18
d1irha_	61	g.8.1.1 (A:) Tissue factor pathway inhibitor {Huma	6e-17
d1irha_	61	g.8.1.1 (A:) Tissue factor pathway inhibitor {Huma	3e-11
d1jc6a_	65	g.8.1.1 (A:) Venom basic protease inhibitor IX (VI	3e-18
d1jc6a_	65	g.8.1.1 (A:) Venom basic protease inhibitor IX (VI	1e-17
d1jc6a_	65	g.8.1.1 (A:) Venom basic protease inhibitor IX (VI	4e-11
d1zr0b1	63	g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor	4e-18
d1zr0b1	63	g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor	1e-16
d1zr0b1	63	g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor	2e-11
d1bf0a_	60	g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dend	5e-18
d1bf0a_	60	g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dend	3e-16
d1bf0a_	60	g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dend	1e-11
d1tfxc_	58	g.8.1.1 (C:) Tissue factor pathway inhibitor {Huma	7e-18
d1tfxc_	58	g.8.1.1 (C:) Tissue factor pathway inhibitor {Huma	2e-17
d1tfxc_	58	g.8.1.1 (C:) Tissue factor pathway inhibitor {Huma	5e-11
d1shpa_	55	g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stich	2e-17
d1shpa_	55	g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stich	4e-16
d1shpa_	55	g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stich	6e-11
d1bika2	56	g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibi	5e-17
d1bika2	56	g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibi	1e-16
d1bika2	56	g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibi	5e-11
d1bika1	54	g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibit	1e-16
d1bika1	54	g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibit	6e-16
d1bika1	54	g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibit	8e-11
d1biha4	89	b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecr	4e-12
d1biha4	89	b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecr	1e-04
d3dara1	97	b.1.1.4 (A:153-249) Fibroblast growth factor recep	2e-10
d1cs6a3	91	b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gall	2e-09
d1cs6a3	91	b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gall	0.004
d2cqva1	101	b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [T	3e-09
d1rhfa1	91	b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor	2e-08
d2fdbp2	109	b.1.1.4 (P:2252-2360) Fibroblast growth factor rec	3e-08
d1qz1a3	100	b.1.1.4 (A:190-289) Neural cell adhesion molecule	5e-08
d1cs6a1	97	b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus	1e-07
d1g1ca_	98	b.1.1.4 (A:) Titin {Human (Homo sapiens), differen	4e-07
d1hnga1	98	b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus no	5e-07
d1f97a2	110	b.1.1.4 (A:129-238) Junction adhesion molecule, JA	8e-07
d1epfa2	92	b.1.1.4 (A:98-189) Neural cell adhesion molecule (	1e-06
d2oz4a3	84	b.1.1.4 (A:367-450) Intercellular adhesion molecul	2e-06
d2oz4a3	84	b.1.1.4 (A:367-450) Intercellular adhesion molecul	5e-04
d1n26a1	93	b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chai	2e-06
d1tnna_	91	b.1.1.4 (A:) Titin {Human (Homo sapiens), differen	3e-06
d1he7a_	107	b.1.1.4 (A:) High affinity nerve growth factor rec	3e-06
d1cs6a4	89	b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gall	3e-06
d1biha3	97	b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecr	3e-06
d1gxea_	130	b.1.1.4 (A:) Cardiac myosin binding protein C, dif	4e-06
d2c9aa1	96	b.1.1.4 (A:184-279) Receptor-type tyrosine-protein	5e-06
d1gl4b_	89	b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus muscu	9e-06
d1x44a1	90	b.1.1.4 (A:8-97) Myosin-binding protein C, slow-ty	1e-05
d1pd6a_	94	b.1.1.4 (A:) Cardiac myosin binding protein C, dif	2e-05
d1nbqa2	104	b.1.1.4 (A:130-233) Junction adhesion molecule, JA	2e-05
d1koaa1	97	b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorha	2e-05
d1wwca_	105	b.1.1.4 (A:) NT3 binding domain of trkC receptor {	2e-05
d1flei_	47	g.3.14.1 (I:) Elafin, elastase-specific inhibitor	4e-05
d2fcba2	88	b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (C	5e-05
d1udka_	51	g.3.14.1 (A:) Nawaprin {Spitting cobra (Naja nigri	7e-05
d1fhga_	102	b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)	8e-05
d3b5ha1	101	b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo	8e-05
d1wwbx_	103	b.1.1.4 (X:) Ligand binding domain of trkB recepto	2e-04
d1zxqa1	106	b.1.1.3 (A:87-192) Intercellular cell adhesion mol	3e-04
d1iray3	107	b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor	3e-04
d1wiua_	93	b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis el	4e-04
d1f97a1	102	b.1.1.1 (A:27-128) Junction adhesion molecule, JAM	7e-04
d1nbqa1	105	b.1.1.1 (A:25-129) Junction adhesion molecule, JAM	8e-04
d1cs6a2	105	b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gall	0.001
d1iama1	103	b.1.1.3 (A:83-185) Intercellular cell adhesion mol	0.001
d1rhfa2	85	b.1.1.4 (A:98-182) Tyrosine-protein kinase recepto	0.002
d1f2qa2	89	b.1.1.4 (A:86-174) IgE high affinity receptor alph	0.002
d1biha1	94	b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropi	0.004

>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 59

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: alpha-Dendrotoxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 78.4 bits (193), Expect = 7e-19
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           + +C+     G C + +  +YY+  + +C +F + GCGGN N F T E C+  C G
Sbjct: 4   RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG 59

>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 59

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: alpha-Dendrotoxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 74.1 bits (182), Expect = 2e-17
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           R  LC L    G C  +  A+Y+++   +C+ F + GC GN+NRF T E+C R C
Sbjct: 3   RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57

>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 59

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: alpha-Dendrotoxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 57.5 bits (139), Expect = 1e-11
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
                 +YY++    C+ F + GC GN NRF     C++ C+
Sbjct: 17  YDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58

>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Alzheimer's amyloid B-protein precursor, APPI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (192), Expect = 9e-19
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          +++C + A  G C   +  WY+D  E +C  F+YGGCGGN+NNF TEE C A C
Sbjct: 2  REVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55

>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Alzheimer's amyloid B-protein precursor, APPI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (185), Expect = 8e-18
 Identities = 25/54 (46%), Positives = 34/54 (62%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C  ++E+GPC    + WYFD    +C  F YGGC GN N F+TEE C  +CG
Sbjct: 3   EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56

>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Alzheimer's amyloid B-protein precursor, APPI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (136), Expect = 3e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +WY+D     C PF YGGC GN N F+ +  C   C
Sbjct: 15  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55

>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Collagen type VI (domain C5 from alpha 3 chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (191), Expect = 1e-18
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 45  KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
            DIC  P   G C +++L WYYD     C +F+YGGCGGN+N F +++ C+  CA 
Sbjct: 2   TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP 57

>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Collagen type VI (domain C5 from alpha 3 chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (178), Expect = 7e-17
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           D+C L  + G C      WY+D NT  C  F YGGC GN N+F ++++CE++C 
Sbjct: 3   DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA 56

>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Collagen type VI (domain C5 from alpha 3 chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 21/41 (51%), Positives = 25/41 (60%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +WYYD +T SC  F YGGC GN N+F  Q  C+K C
Sbjct: 15  RDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55

>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Pancreatic trypsin inhibitor, BPTI
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.2 bits (190), Expect = 2e-18
 Identities = 20/55 (36%), Positives = 30/55 (54%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           D CL+P   G C   ++ ++Y++    C+ F YGGC   +NNF + E C   C G
Sbjct: 3   DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57

>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Pancreatic trypsin inhibitor, BPTI
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.5 bits (183), Expect = 2e-17
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R D C     +G C  +   ++++     CQ+F+YGGC    N F + E C R CG
Sbjct: 1   RPDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56

>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Pancreatic trypsin inhibitor, BPTI
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R    +++Y+     CQ F YGGC+   N F     C + C
Sbjct: 15  RARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55

>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]} Length = 57

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Dendrotoxin K
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]

 Score = 76.8 bits (189), Expect = 2e-18
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 44  AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           A   C  P  IG C   + ++YY     +C  F Y GCGGN N F T E C+  C G
Sbjct: 1   AAKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG 57

>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]} Length = 57

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Dendrotoxin K
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]

 Score = 70.6 bits (173), Expect = 3e-16
 Identities = 22/51 (43%), Positives = 29/51 (56%)

Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           C L    GPC ++  ++Y+     +C  F Y GC GNANRF T E+C R C
Sbjct: 5   CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55

>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]} Length = 57

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Dendrotoxin K
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]

 Score = 58.3 bits (141), Expect = 9e-12
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           +     +YY      C PF Y GC GN NRF     C++ CV
Sbjct: 15  KRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56

>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: beta2-bungarotoxin, neurotoxin chain
species: Many-banded krait (Bungarus multicinctus) [TaxId: 8616]

 Score = 76.8 bits (189), Expect = 3e-18
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR 553
           R+  C    ++  C     A+Y+  +  RC  F YGGC GN N F ++  C   C E+R
Sbjct: 3   RHPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEYR 61

>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: beta2-bungarotoxin, neurotoxin chain
species: Many-banded krait (Bungarus multicinctus) [TaxId: 8616]

 Score = 72.6 bits (178), Expect = 9e-17
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
            C +P     C   V  +YY     RC QF YGGC GN N+F ++  C+  C
Sbjct: 5  PDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCEC 57

>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: beta2-bungarotoxin, neurotoxin chain
species: Many-banded krait (Bungarus multicinctus) [TaxId: 8616]

 Score = 57.2 bits (138), Expect = 2e-11
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           +     +YY      C  F+YGGC GN N F     C+  C++
Sbjct: 17  QTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLE 59

>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (188), Expect = 3e-18
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 41  QFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
           +F     CL PA  G C      +YY+S+  +CR F Y GCGGN+NNF +++ C   C  
Sbjct: 1   EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

Query: 101 G 101
           G
Sbjct: 61  G 61

>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (179), Expect = 6e-17
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
             C   ++ G C   E  +Y++    +C+ F Y GC GN N F ++++C R C +
Sbjct: 6   SWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (137), Expect = 3e-11
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           R N  ++YY+     C+PF+Y GC GN N F  +  C + C +
Sbjct: 18  RANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60

>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb) {Banded krait (Bungarus fasciatus) [TaxId: 8613]} Length = 65

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Venom basic protease inhibitor IX (VIIIb)
species: Banded krait (Bungarus fasciatus) [TaxId: 8613]

 Score = 76.4 bits (188), Expect = 3e-18
 Identities = 23/55 (41%), Positives = 30/55 (54%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
             C      G C   +  +YY+S   +C++F YGGCGGN NNF T + CQ  CA 
Sbjct: 5   TFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAA 59

>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb) {Banded krait (Bungarus fasciatus) [TaxId: 8613]} Length = 65

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Venom basic protease inhibitor IX (VIIIb)
species: Banded krait (Bungarus fasciatus) [TaxId: 8613]

 Score = 74.9 bits (184), Expect = 1e-17
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           R   C L  E+G C     A+Y++ + ++CQ F YGGC GNAN F T ++C+R C 
Sbjct: 3   RPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCA 58

>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb) {Banded krait (Bungarus fasciatus) [TaxId: 8613]} Length = 65

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Venom basic protease inhibitor IX (VIIIb)
species: Banded krait (Bungarus fasciatus) [TaxId: 8613]

 Score = 56.8 bits (137), Expect = 4e-11
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
                 +YY+     CQ F YGGC GN N F     CQ+ C 
Sbjct: 17  NALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCA 58

>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (188), Expect = 4e-18
 Identities = 28/54 (51%), Positives = 31/54 (57%)

Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
           +ICL P   G C   +L +YYD     CRQF YGGC GN NNF T EAC   C
Sbjct: 6  AEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59

>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (177), Expect = 1e-16
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           ++C L  + GPC      +Y+DR T  C+ F+YGGCEGNAN F T E C+  C 
Sbjct: 7   EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACW 60

>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (138), Expect = 2e-11
 Identities = 19/43 (44%), Positives = 25/43 (58%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           R    ++YYDR T SC+ F YGGC+GN N F    +C   C +
Sbjct: 19  RALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR 61

>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 60

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Calcicludine (cac)
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 76.1 bits (187), Expect = 5e-18
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
             C +P  IG C     ++Y+     +C  F + GCGGN N F T   C+ +C G
Sbjct: 5   WYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG 59

>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 60

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Calcicludine (cac)
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 71.1 bits (174), Expect = 3e-16
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
             C      G C +Q +++YF     +C  F++ GC GNANRF T  +C + C
Sbjct: 5   WYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57

>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} Length = 60

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Calcicludine (cac)
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
           +  +  +Y+      C PF + GC GN NRF     C+K+C+
Sbjct: 17  KKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58

>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (186), Expect = 7e-18
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 46  DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
           D C      G C  Y+  ++Y++   +C +F YGGC GN NNF T E C+  C  G
Sbjct: 3   DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG 58

>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (182), Expect = 2e-17
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
           + D CFLE + G C      ++++  T +C+ F YGGC GN N F T E+C+ +C +
Sbjct: 1   KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 57

>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
           RG   +++Y+  T  C+ F+YGGC GN N F     C+  C  
Sbjct: 15  RGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 57

>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]} Length = 55

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Trypsin inhibitor
species: Sea anemone (Stichodactyla helianthus) [TaxId: 6123]

 Score = 74.1 bits (182), Expect = 2e-17
 Identities = 25/52 (48%), Positives = 31/52 (59%)

Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          IC +P  +G C  Y   +Y+DS   +C  F YGGCGGN NNF T   C+A C
Sbjct: 2  ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53

>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]} Length = 55

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Trypsin inhibitor
species: Sea anemone (Stichodactyla helianthus) [TaxId: 6123]

 Score = 70.3 bits (172), Expect = 4e-16
 Identities = 22/53 (41%), Positives = 27/53 (50%)

Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           +C    + G C      +YFD  T +C  FIYGGC GN N F T  QC  +C 
Sbjct: 2   ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54

>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]} Length = 55

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Trypsin inhibitor
species: Sea anemone (Stichodactyla helianthus) [TaxId: 6123]

 Score = 55.7 bits (134), Expect = 6e-11
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           +G + ++Y+D +T  C PF YGGC GN N F     C+  C
Sbjct: 13  KGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53

>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (179), Expect = 5e-17
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
           C  P V G C  ++  W +D+++ +C  F YGGC GN N F +E+ C+  C
Sbjct: 3  ACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54

>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (176), Expect = 1e-16
 Identities = 22/52 (42%), Positives = 28/52 (53%)

Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
           C L    GPC      W FD    +C  F YGGC+GN N+F +E++C   CG
Sbjct: 4   CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCG 55

>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
           R   + W +D     C  F YGGCQGN N+F  +  C++ C
Sbjct: 14  RAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54

>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 54

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (176), Expect = 1e-16
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
          C      G C      ++Y+     C  F YGGC GN NNF+TE+ C   C
Sbjct: 2  CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52

>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 54

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (171), Expect = 6e-16
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
           C L   +GPC    + ++++  +  C++F YGGC GN N F TE++C + C
Sbjct: 2   CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52

>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]} Length = 54

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (133), Expect = 8e-11
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
            G   +++Y+  + +C+ FQYGGC GN N F  +  C + C
Sbjct: 12  MGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 60.2 bits (145), Expect = 4e-12
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 4/92 (4%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           S P++    E  +  ++G  VT+ C   G P P   WS     + G         D  L 
Sbjct: 1   SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVT---DSGLV 57

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           I G+   D G Y C A N  GD    E  V V
Sbjct: 58  IKGVKNGDKGYYGCRATNEHGD-KYFETLVQV 88

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 121 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
           S P++    E  +  ++G  VT+ C   G P P   WS  
Sbjct: 1   SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN 40

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
           P   +  +     +        N V  RC A G P+P   W K               + 
Sbjct: 2   PYWTNTEKM---EKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 58

Query: 394 ---GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
                L +  +V  D G Y CV  N  G  I   +++ V
Sbjct: 59  NQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHLDV 96

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQI 398
            P           A  G  VTL C A G P+P   W K     DGS     L+ + +L I
Sbjct: 4   APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKL----DGSQTSKWLSSEPLLHI 59

Query: 399 VGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             +  +D G Y C A N  G     +  +I+
Sbjct: 60  QNVDFEDEGTYECEAENIKGR-DTYQGRIII 89

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.8 bits (79), Expect = 0.004
 Identities = 12/36 (33%), Positives = 13/36 (36%)

Query: 122 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTW 157
            P           A  G  VTL C A G P+P   W
Sbjct: 4   APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 39

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 3e-09
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 4/94 (4%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY--KLTLDGVLQ 397
           P+   + E   +   G  V L     G      TW K    I  S+            L 
Sbjct: 1   PQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLT 59

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           I+   ++  G Y  +  N +G   + + N+ V  
Sbjct: 60  ILAARQEHCGCYTLLVENKLGS-RQAQVNLTVVD 92

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 2e-08
 Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQD 405
           +   +G  V L C   G   P   W K    +   D  Y         G L +  + R D
Sbjct: 6   LTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSD 65

Query: 406 AGIYVCVAANGIGDPIRKEFNVIVRG 431
           AG Y C   +G    I +   + V G
Sbjct: 66  AGRYWCQVEDGGETEISQPVWLTVEG 91

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 3e-08
 Identities = 19/96 (19%), Positives = 23/96 (23%), Gaps = 15/96 (15%)

Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS------------- 384
             P              G  V   C       P   W K                     
Sbjct: 3   HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLK 62

Query: 385 --DGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
               +       VL I  +  +DAG Y C+A N IG
Sbjct: 63  AAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIG 98

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 5e-08
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 339 PPRFHNYSEPT-VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID----GSDGHYKLTLD 393
           PP            A  G  VTL C A G+P P  +W+K    I+      + H      
Sbjct: 3   PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 62

Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             L I  + + D   YVC+A N  G+      ++ V
Sbjct: 63  SELTIRNVDKNDEAEYVCIAENKAGE-QDASIHLKV 97

>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.6 bits (112), Expect = 1e-07
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 339 PPRFHNYSEPTV--EAEEGNFVTLRCIAIGYPIPVYTWSKGEVS-IDGSDGHYKLTLDGV 395
            P F      T+  E      VTL C A   P   Y W         G D  Y+L    +
Sbjct: 4   GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
           +    +  +DAG Y CVA N  G
Sbjct: 64  VISNPVKAKDAGSYQCVATNARG 86

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 4e-07
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GV 395
            P+     +      +G+    R   +G P P   W K  V I+ SD  Y    +     
Sbjct: 4   APKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 62

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
           L I  +  +D+   +  A N  G+       ++V+ 
Sbjct: 63  LVIRDVTGEDSASIMVKAINIAGE-TSSHAFLLVQA 97

>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2, first domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.2 bits (109), Expect = 5e-07
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 12/94 (12%)

Query: 348 PTVEAEEGNFVTLRC-----------IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
            TV    G+ + L             +       +    K ++      G +++  +G L
Sbjct: 3   GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDL 62

Query: 397 QIVGLVRQDAGIYVCVAANGIG-DPIRKEFNVIV 429
           +I  L R D+G Y     +  G   + K  ++ +
Sbjct: 63  KIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRI 96

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 110

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.8 bits (107), Expect = 8e-07
 Identities = 26/95 (27%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLD---- 393
           PP     S P      GN   L C    G P   Y+W K  +S+  +D            
Sbjct: 2   PPSKPTISVP-SSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSF 60

Query: 394 ------GVLQIVGLVRQDAGIYVCVAANGIGDPIR 422
                 G L    +   D+G Y C A NG G  +R
Sbjct: 61  TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMR 95

>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.9 bits (105), Expect = 1e-06
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGI 408
            E +EG    + C  +    P   W   G   I   D  + +  +  LQI G+ + D G 
Sbjct: 11  QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGT 70

Query: 409 YVCVAAN-GIGDPIRKEFNVIV 429
           Y C       G+   K+  VIV
Sbjct: 71  YRCEGRILARGEINFKDIQVIV 92

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 21/92 (22%), Positives = 30/92 (32%), Gaps = 13/92 (14%)

Query: 339 PPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
            PR      P      E +  T  C A G P+P     K                    +
Sbjct: 2   GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG-----------E 50

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            V + R   G Y+C A +  G+ + +E  V V
Sbjct: 51  SVTVTRDLEGTYLCRARSTQGE-VTREVTVNV 81

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 5e-04
 Identities = 11/39 (28%), Positives = 13/39 (33%), Gaps = 1/39 (2%)

Query: 122 PPRFHNYSEP-TVEAEEGNFVTLRCIAIGYPIPVYTWSK 159
            PR      P      E +  T  C A G P+P     K
Sbjct: 2   GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK 40

>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Interleukin-6 receptor alpha chain, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 1/91 (1%)

Query: 337 PSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVL 396
              P         + +  G+ VTL C  +                 GS       +   L
Sbjct: 4   RRCPAQEVARG-VLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRL 62

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNV 427
            +  +   D+G Y C  A      +    +V
Sbjct: 63  LLRSVQLHDSGNYSCYRAGRPAGTVHLLVDV 93

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 3/83 (3%)

Query: 350 VEAEEGNFVTLRCIAIGYPIP--VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG 407
           +   EG      C   G P+P   +      +S                +I  +   D G
Sbjct: 9   MTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEG 68

Query: 408 IYVCVAANGIGDPIRKEFNVIVR 430
            Y  V  N  G     EF + ++
Sbjct: 69  NYSVVVENSEGK-QEAEFTLTIQ 90

>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 3e-06
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 10/88 (11%)

Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH---------YKLTLDGVLQIVGL 401
            A E +   +     G P P   W      ++ +             +    G L++   
Sbjct: 11  TAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQP 70

Query: 402 VRQDAGIYVCVAANGIGDPIRKEFNVIV 429
              + G Y  +AAN  G           
Sbjct: 71  THVNNGNYTLLAANPFGQ-ASASIMAAF 97

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIY 409
            EA+ G+ +   C+A G P P   W +       +  +      G L+   LV +D+G+Y
Sbjct: 11  TEADIGSDLRWSCVASGKPRPAVRWLR--DGQPLASQNRIEVSGGELRFSKLVLEDSGMY 68

Query: 410 VCVAANGIGDPIRKEFNVIVR 430
            CVA N  G  +     + V+
Sbjct: 69  QCVAENKHGT-VYASAELTVQ 88

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 345 YSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVG 400
           Y    + A+ G+   + C+    P+    + K    ++G+        +      L    
Sbjct: 8   YVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKT 67

Query: 401 LVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
            + +D G+Y C   NG+G P +    + V
Sbjct: 68  TLPEDEGVYTCEVDNGVGKPQKHSLKLTV 96

>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (103), Expect = 4e-06
 Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 36/126 (28%)

Query: 339 PPRFH----NYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS---------- 384
           PP+ H         T+    GN + L     G P P   W K     + +          
Sbjct: 4   PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 63

Query: 385 ------------------DGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRK 423
                             +G  ++       +  + G  ++D G+Y     N +G+  + 
Sbjct: 64  DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGE-DQV 122

Query: 424 EFNVIV 429
              V V
Sbjct: 123 NLTVKV 128

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (100), Expect = 5e-06
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-----DGVLQIVGLVRQ 404
           VE   G F T +C AIG  +         + +  +                  +V   ++
Sbjct: 11  VEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKR 70

Query: 405 DAGIYVCVAANGIGDPIRKEFNVIVR 430
           DAG Y C+     G  I     ++V+
Sbjct: 71  DAGKYRCMIRTEGGVGISNYAELVVK 96

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.3 bits (98), Expect = 9e-06
 Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           P       + +     G  VT  C A    P     W++       S        +G+L 
Sbjct: 1   PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDF---NGILT 57

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           I  +   DAG YVC  +N      +    + V+
Sbjct: 58  IRNVQPSDAGTYVCTGSNMFAM-DQGTATLHVQ 89

>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDA 406
             A  G  V L C        V  +  GE  I G    Y++ ++G   +L I G  + DA
Sbjct: 10  TTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADA 69

Query: 407 GIYVCVAANGIG 418
             Y  +   G  
Sbjct: 70  AEYSVMTTGGQS 81

>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 17/80 (21%), Positives = 22/80 (27%), Gaps = 4/80 (5%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---V 395
              F    EP  +  +G+ + L    +        W K    I  S   Y     G    
Sbjct: 5   STAFQKKLEPAYQVSKGHKIRLTVE-LADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRT 63

Query: 396 LQIVGLVRQDAGIYVCVAAN 415
           L I      D   Y CV   
Sbjct: 64  LTISQCSLADDAAYQCVVGG 83

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLD---- 393
           PP     + P   A  GN   L C    G P   YTW K  + +  +    +   +    
Sbjct: 2   PPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYV 60

Query: 394 -----GVLQIVGLVRQDAGIYVCVAANGIG 418
                G L    L   D G Y C A NG G
Sbjct: 61  LNPTTGELVFDPLSASDTGEYSCEARNGYG 90

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 3/87 (3%)

Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV--LQIVGLVRQDAG 407
            E  EG      C  I    PV TW K +  +  S  + K        L I  +   D G
Sbjct: 11  TEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKG 70

Query: 408 IYVCVAANGIGDPIRKEFNVIVRGNYE 434
            Y   A N  G    +   + V  + E
Sbjct: 71  EYTVRAKNSYGT-KEEIVFLNVTRHSE 96

>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: NT3 binding domain of trkC receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 2e-05
 Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 11/97 (11%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL------ 392
           PPR  +  EP    E      +  +  G P P   W      +  S   +          
Sbjct: 5   PPRVVSLEEP----ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS 60

Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           +G L        + G Y  +A N +G    +  N   
Sbjct: 61  EGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHF 96

>d1flei_ g.3.14.1 (I:) Elafin, elastase-specific inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 47

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Elafin-like
family: Elafin-like
domain: Elafin, elastase-specific inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 4/42 (9%)

Query: 270 KEGEC----RPQPQNVCADNCKDDADCTGQAKCCPNDCGYSC 307
           K G C             + C  D DC G  KCC   CG +C
Sbjct: 2   KPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMAC 43

>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-05
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 7/85 (8%)

Query: 348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
           P +E +EG  + LRC +    P+   T+ +   S   S      ++             +
Sbjct: 8   PHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQA------NHSHS 61

Query: 407 GIYVCVAANGIGDPIRKEFNVIVRG 431
           G Y C    G      K   + V+ 
Sbjct: 62  GDYHCTGNIGYTLYSSKPVTITVQA 86

>d1udka_ g.3.14.1 (A:) Nawaprin {Spitting cobra (Naja nigricollis) [TaxId: 8654]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Elafin-like
family: Elafin-like
domain: Nawaprin
species: Spitting cobra (Naja nigricollis) [TaxId: 8654]

 Score = 38.4 bits (89), Expect = 7e-05
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)

Query: 270 KEGEC----RPQPQ-NVCADNCKDDADCTGQAKCCPNDCG 304
           K G C     P P   +C   C  D+ C    KCC N CG
Sbjct: 3   KSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCG 42

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

 Score = 39.9 bits (92), Expect = 8e-05
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GV 395
            P F       +E  EG+     C   GYP P   W K +  +  S        +     
Sbjct: 8   KPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCS 66

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
           L I  +   D   Y C A N +G+       ++V
Sbjct: 67  LTISEVCGDDDAKYTCKAVNSLGE-ATCTAELLV 99

>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (91), Expect = 8e-05
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYP------IPVYTWSKGEVSIDGSDGHYKLTL 392
           PPR            EG    L C +   P          T S+ +  ++GS+  + ++ 
Sbjct: 2   PPRVKAVKSS-EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS 60

Query: 393 DG---VLQIVGLVRQD-AGIYVCVAANGIGDPIRKEFNVIVR 430
                 L I  L  +   G Y C   +  G   +    + VR
Sbjct: 61  SQGRSELHIENLNMEADPGQYRCNGTSSKGS-DQAIITLRVR 101

>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of trkB receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 17/98 (17%), Positives = 26/98 (26%), Gaps = 12/98 (12%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----- 393
            P       PT      +   +     G P P   W      ++ S              
Sbjct: 4   APTITFLESPTS----DHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTE 59

Query: 394 --GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV 429
             G LQ+      + G Y  +A N  G    K+ +   
Sbjct: 60  YHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQISAHF 96

>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2 (ICAM-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-2 (ICAM-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 3e-04
 Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 7/87 (8%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIG---YPIPVYTWSKGEVSIDGSDGHYKLTLD-- 393
           PPR    +        G   T+ C                +G  ++              
Sbjct: 1   PPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQE 60

Query: 394 --GVLQIVGLVRQDAGIYVCVAANGIG 418
                            + C+A   + 
Sbjct: 61  ATATFNSTADREDGHRNFSCLAVLDLM 87

>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 3e-04
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 15/94 (15%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT-------- 391
           P   + +  T+E + G+ + L C   G    +  W      ID  D              
Sbjct: 2   PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 61

Query: 392 ------LDGVLQIVGLVRQDAGI-YVCVAANGIG 418
                 L  VL I  +  +     + C A N  G
Sbjct: 62  NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 95

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL--TLDGVL 396
            P+    S   ++ + G    L    IG P P  TW+ G+     +        +    +
Sbjct: 2   KPKILTASRK-IKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSI 60

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
                 R D+G Y     N +G+     F VIV+
Sbjct: 61  FFPSAKRADSGNYKLKVKNELGE-DEAIFEVIVQ 93

>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (84), Expect = 7e-04
 Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 11/95 (11%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----------EVSIDGSDGHYKLTLDGV 395
           ++  V+  E   + L C   G+  P   W                I              
Sbjct: 7   AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSG 66

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRK-EFNVIV 429
           +    + R+D G Y C+ +   G    +   ++ V
Sbjct: 67  ITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTV 101

>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 8e-04
 Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 11/95 (11%)

Query: 346 SEPTVEAEEGNFVTLRCIAIGYPIPVYTWS----------KGEVSIDGSDGHYKLTLDGV 395
           SEP V   E N V L C   G+  P   W                I  S       L   
Sbjct: 10  SEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTG 69

Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRK-EFNVIV 429
           +    + R+D G Y C+ +   G+   + +  +IV
Sbjct: 70  ITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV 104

>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 3/94 (3%)

Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAI-GYPIPVYTWSKG--EVSIDGSDGHYKLTLDGVL 396
             F       V+  EG  V   C     YP   Y W        I      +     G L
Sbjct: 4   QEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNL 63

Query: 397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
            I      D G Y C A + I    +  F+   +
Sbjct: 64  YIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQ 97

>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-1 (ICAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 12/83 (14%), Positives = 22/83 (26%), Gaps = 5/83 (6%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIG---YPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
           P R      P+     G  +TLRC   G            +GE  +       +   +  
Sbjct: 4   PERVELAPLPS-WQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPA-EVT 61

Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
             ++         + C     + 
Sbjct: 62  TTVLVRRDHHGAQFSCRTELDLR 84

>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Tyrosine-protein kinase receptor tyro3, second domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.002
 Identities = 17/93 (18%), Positives = 26/93 (27%), Gaps = 11/93 (11%)

Query: 340 PRFHNYSEPT-VEAEEGNFVTL-RCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ 397
           P F    EP  +         L              W +G   I G           VL 
Sbjct: 2   PFFT--VEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPS-----VLN 54

Query: 398 IVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
           + G     + ++ C A N  G    +   V ++
Sbjct: 55  VTG--VTQSTMFSCEAHNLKGLASSRTATVHLQ 85

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 348 PTVEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
                 EG  + LRC       +    + K   ++     ++ +++           +D+
Sbjct: 8   SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNA------TVEDS 61

Query: 407 GIYVCVAANGIGDPIRKEFNVIVR 430
           G Y C       D   +  N+ V 
Sbjct: 62  GTYYCTGKVWQLDYESEPLNITVI 85

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 35.0 bits (79), Expect = 0.004
 Identities = 18/82 (21%), Positives = 22/82 (26%), Gaps = 3/82 (3%)

Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI--DGSDGHYKLTLDGVL 396
            P   +     V   E N   L CI  G    V    K +                +G L
Sbjct: 2   YPVLKDQPAE-VLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSL 60

Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
             +     D G Y C A    G
Sbjct: 61  VFLRPQASDEGHYQCFAETPAG 82

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	615
d1aapa_	56	Alzheimer's amyloid B-protein precursor, APPI {Hum	99.75
d1ktha_	58	Collagen type VI (domain C5 from alpha 3 chain) {H	99.73
d1dtxa_	59	alpha-Dendrotoxin {Green mamba (Dendroaspis angust	99.73
d1bika2	56	Bikunin from inter-alpha-inhibitor complex {Human	99.72
d1dtka_	57	Dendrotoxin K {Black mamba (Dendroaspis polylepis	99.72
d1shpa_	55	Trypsin inhibitor {Sea anemone (Stichodactyla heli	99.72
d1bika1	54	Bikunin from inter-alpha-inhibitor complex {Human	99.71
d1zr0b1	63	Tissue factor pathway inhibitor {Human (Homo sapie	99.7
d1g6xa_	58	Pancreatic trypsin inhibitor, BPTI {Cow (Bos tauru	99.7
d1tfxc_	58	Tissue factor pathway inhibitor {Human (Homo sapie	99.69
d1aapa_	56	Alzheimer's amyloid B-protein precursor, APPI {Hum	99.69
d1bunb_	61	beta2-bungarotoxin, neurotoxin chain {Many-banded	99.69
d1irha_	61	Tissue factor pathway inhibitor {Human (Homo sapie	99.68
d1jc6a_	65	Venom basic protease inhibitor IX (VIIIb) {Banded	99.67
d1dtxa_	59	alpha-Dendrotoxin {Green mamba (Dendroaspis angust	99.67
d1ktha_	58	Collagen type VI (domain C5 from alpha 3 chain) {H	99.67
d1bika2	56	Bikunin from inter-alpha-inhibitor complex {Human	99.67
d1dtka_	57	Dendrotoxin K {Black mamba (Dendroaspis polylepis	99.67
d1shpa_	55	Trypsin inhibitor {Sea anemone (Stichodactyla heli	99.66
d1bf0a_	60	Calcicludine (cac) {Green mamba (Dendroaspis angus	99.66
d1bika1	54	Bikunin from inter-alpha-inhibitor complex {Human	99.65
d1bunb_	61	beta2-bungarotoxin, neurotoxin chain {Many-banded	99.64
d1g6xa_	58	Pancreatic trypsin inhibitor, BPTI {Cow (Bos tauru	99.64
d1zr0b1	63	Tissue factor pathway inhibitor {Human (Homo sapie	99.63
d1tfxc_	58	Tissue factor pathway inhibitor {Human (Homo sapie	99.62
d1irha_	61	Tissue factor pathway inhibitor {Human (Homo sapie	99.61
d1jc6a_	65	Venom basic protease inhibitor IX (VIIIb) {Banded	99.61
d1bf0a_	60	Calcicludine (cac) {Green mamba (Dendroaspis angus	99.61
d1udka_	51	Nawaprin {Spitting cobra (Naja nigricollis) [TaxId	98.7
d1flei_	47	Elafin, elastase-specific inhibitor {Human (Homo s	98.56
d1biha4	89	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	98.44
d1rhfa1	91	Tyrosine-protein kinase receptor tyro3, N-terminal	98.43
d1cs6a3	91	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	98.39
d1cs6a4	89	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	98.37
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	98.33
d1g1ca_	98	Titin {Human (Homo sapiens), different modules [Ta	98.33
d1tnna_	91	Titin {Human (Homo sapiens), different modules [Ta	98.32
d1wiua_	93	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	98.28
d2ifga1	92	High affinity nerve growth factor receptor TrkA, d	98.25
d1biha3	97	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	98.24
d1fhga_	102	Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103	98.21
d1gl4b_	89	Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId:	98.21
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	98.2
d3dara1	97	Fibroblast growth factor receptor, FGFR {Human (Ho	98.19
d1koaa1	97	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	98.19
d1epfa2	92	Neural cell adhesion molecule (NCAM) {Rat (Rattus	98.18
d1qz1a3	100	Neural cell adhesion molecule (NCAM) {Rat (Rattus	98.17
d1vcaa2	90	Vascular cell adhesion molecule-1 (VCAM-1) {Human	98.17
d1biha1	94	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	98.15
d3b5ha1	101	Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 960	98.14
d1gsma1	90	Mucosal addressin cell adhesion molecule-1 (MADCAM	98.11
d1olza1	92	Semaphorin 4d Ig-like domain {Human (Homo sapiens)	98.09
d1n26a1	93	Interleukin-6 receptor alpha chain, N-terminal dom	98.08
d1cs6a1	97	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	98.04
d1epfa1	97	Neural cell adhesion molecule (NCAM) {Rat (Rattus	98.04
d1gxea_	130	Cardiac myosin binding protein C, different domain	98.03
d1l6za2	96	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-t	98.03
d1rhfa2	85	Tyrosine-protein kinase receptor tyro3, second dom	98.02
d1nbqa1	105	Junction adhesion molecule, JAM, N-terminal domain	97.99
d2fdbp2	109	Fibroblast growth factor receptor, FGFR {Human (Ho	97.96
d1cs6a2	105	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	97.93
d1pd6a_	94	Cardiac myosin binding protein C, different domain	97.93
d2c9aa1	96	Receptor-type tyrosine-protein phosphatase mu {Hum	97.93
d2oz4a3	84	Intercellular adhesion molecule-1, ICAM-1 {Human (	97.92
d2aw2a1	104	B- and T-lymphocyte attenuator CD272 {Human (Homo	97.87
d2avga1	110	Cardiac myosin binding protein C, different domain	97.86
d1nbqa2	104	Junction adhesion molecule, JAM, C-terminal domain	97.84
d2fcba2	88	Fc gamma receptor ectodomain (CD32) {Human (Homo s	97.84
d1iray3	107	Type-1 interleukin-1 receptor {Human (Homo sapiens	97.83
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	97.82
d1f97a1	102	Junction adhesion molecule, JAM, N-terminal domain	97.79
d1fnla2	89	Fc gamma receptor ectodomain (CD32) {Human (Homo s	97.77
d1tiua_	89	Twitchin {Human (Homo sapiens), Ig repeat 27 [TaxI	97.76
d1iray1	101	Type-1 interleukin-1 receptor {Human (Homo sapiens	97.74
d2dava1	113	Myosin-binding protein C, slow-type {Human (Homo s	97.73
d1wwca_	105	NT3 binding domain of trkC receptor {Human (Homo s	97.67
d1he7a_	107	High affinity nerve growth factor receptor TrkA, d	97.66
d1biha2	111	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	97.64
d1x44a1	90	Myosin-binding protein C, slow-type {Human (Homo s	97.59
d1wwbx_	103	Ligand binding domain of trkB receptor {Human (Hom	97.58
d1fnla1	84	Fc gamma receptor ectodomain (CD32) {Human (Homo s	97.52
d1iray2	103	Type-1 interleukin-1 receptor {Human (Homo sapiens	97.51
d2crya1	115	Kin of IRRE-like protein 3, KIRREL3 {Human (Homo s	97.42
d1f2qa2	89	IgE high affinity receptor alpha subunit {Human (H	97.38
d1f2qa1	82	IgE high affinity receptor alpha subunit {Human (H	97.22
d2fcba1	85	Fc gamma receptor ectodomain (CD32) {Human (Homo s	97.18
d1ccza1	93	CD2-binding domain of CD58, N-terminal domain {Hum	97.06
d1zxqa1	106	Intercellular cell adhesion molecule-2 (ICAM-2) {H	96.87
d1iama1	103	Intercellular cell adhesion molecule-1 (ICAM-1) {H	96.75
d1hnga1	98	CD2, first domain {Rat (Rattus norvegicus) [TaxId:	96.69
d1l6za1	107	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-t	96.31
d1tocr2	63	Ornithodorin {Soft tick (Ornithodoros moubata) [Ta	95.5
d1pkoa_	126	Myelin oligodendrocyte glycoprotein (MOG) {Rat (Ra	94.95
d2nxyb1	97	CD4 V-set domains {Human (Homo sapiens) [TaxId: 96	94.54
d1tocr2	63	Ornithodorin {Soft tick (Ornithodoros moubata) [Ta	92.97
d1eaja_	124	Coxsackie virus and adenovirus receptor (Car), dom	91.67
d1lp9e1	115	T-cell antigen receptor {Mouse (Mus musculus), alp	90.94
d1ospl1	107	Immunoglobulin light chain kappa variable domain,	90.72
d1jhll_	108	Immunoglobulin light chain kappa variable domain,	90.69
d1nezg_	122	CD8 {Mouse (Mus musculus) [TaxId: 10090]}	90.05
d1kcvl1	107	Immunoglobulin light chain kappa variable domain,	90.04
d1lk3l1	106	Immunoglobulin light chain kappa variable domain,	90.0
d1sq2n_	112	Novel antigen receptor (against lysozyme) {Nurse s	89.88
d1mexl1	107	Immunoglobulin light chain kappa variable domain,	89.79
d1j1pl_	107	Immunoglobulin light chain kappa variable domain,	89.73
d1tjgl1	107	Immunoglobulin light chain kappa variable domain,	89.66
d1c5cl1	107	Immunoglobulin light chain kappa variable domain,	89.59
d1a0ql1	106	Immunoglobulin light chain kappa variable domain,	89.4
d2cdea1	114	T-cell antigen receptor {Human (Homo sapiens), bet	88.74
d1i8ka_	106	Immunoglobulin light chain kappa variable domain,	88.68
d1d5il1	107	Immunoglobulin light chain kappa variable domain,	88.54
d1bwwa_	109	Immunoglobulin light chain kappa variable domain,	88.39
d1vesa_	113	Novel antigen receptor 12Y-2 {Spotted wobbegong (O	88.29
d1neua_	119	Myelin membrane adhesion molecule P0 {Rat (Rattus	87.75
d1mqkl_	109	Immunoglobulin light chain kappa variable domain,	87.72
d1dr9a1	105	CD80, N-terminal domain {Human (Homo sapiens) [Tax	87.67
d1ymmd1	96	T-cell antigen receptor {Human (Homo sapiens), alp	87.49
d3cx5k1	107	Immunoglobulin light chain kappa variable domain,	87.42
d1olla1	95	Ligand binding domain of NK receptor NKp46 {Human	87.3
d1op3k1	106	Immunoglobulin light chain kappa variable domain,	87.21
d1tvda_	116	T-cell antigen receptor {Human (Homo sapiens), del	87.0
d2gj6d1	94	T-cell antigen receptor {Mouse (Mus musculus), bet	86.99
d1u3ha1	110	T-cell antigen receptor {Mouse (Mus musculus), alp	86.6
d1i9ea_	115	T-cell antigen receptor {Mouse (Mus musculus), alp	86.25
d3bp5a1	114	Programmed cell death protein 1, PD1, extracellula	86.17
d1j8hd1	115	T-cell antigen receptor {Human (Homo sapiens), alp	86.05
d2atpb1	115	CD8 {Mouse (Mus musculus), beta-chain [TaxId: 1009	85.87
d1hkfa_	108	NK cell activating receptor NKP44 {Human (Homo sap	85.78
d1xeda_	116	Polymeric-immunoglobulin receptor, PIGR {Human (Ho	85.56
d8faba1	103	Immunoglobulin light chain lambda variable domain,	85.49
d2esvd1	110	T-cell antigen receptor {Human (Homo sapiens), alp	85.27
d1ac6a_	110	T-cell antigen receptor {Mouse (Mus musculus), alp	85.21
d1bd2d1	111	T-cell antigen receptor {Human (Homo sapiens), alp	85.15
d1ucta1	99	Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sa	85.14
d1akjd_	114	CD8 {Human (Homo sapiens) [TaxId: 9606]}	84.87
d2ij0c1	118	T-cell antigen receptor {Human (Homo sapiens), bet	83.94
d2bnqd1	113	T-cell antigen receptor {Human (Homo sapiens), alp	83.91
d1smoa_	113	TREM-1 (triggering receptor expressed on myeloid c	83.87
d2ak4d1	114	T-cell antigen receptor {Human (Homo sapiens), alp	82.69
d1w72l1	109	Immunoglobulin light chain lambda variable domain,	81.33
d1kgcd1	112	T-cell antigen receptor {Human (Homo sapiens), alp	80.92
d2fx7l1	108	Immunoglobulin light chain kappa variable domain,	80.81
d1fo0a_	115	T-cell antigen receptor {Mouse (Mus musculus), alp	80.62
d2rhea_	114	Immunoglobulin light chain lambda variable domain,	80.29

>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Alzheimer's amyloid B-protein precursor, APPI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.1e-19  Score=134.09  Aligned_cols=56  Identities=46%  Similarity=1.121  Sum_probs=53.8

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      ++++|.+|++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|.
T Consensus         1 v~d~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GCgGN~NnF~t~~~C~~~CG   56 (56)
T d1aapa_           1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG   56 (56)
T ss_dssp             CGGGGGBCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             CCcccCCCCCCcCCCCceeEEEEECCCCcEeeeEcCCccCCccCcCCHHHHHHhhC
Confidence            46899999999999999999999999999999999999999999999999999984

>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Collagen type VI (domain C5 from alpha 3 chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-18  Score=132.74  Aligned_cols=56  Identities=45%  Similarity=1.140  Sum_probs=54.2

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .++|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|.+
T Consensus         2 ~d~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GCgGN~N~F~t~~~C~~~C~~   57 (58)
T d1ktha_           2 TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP   57 (58)
T ss_dssp             CGGGGSCCCCCBSSCCEEEEEEETTTTEEEEEEECSBSCCSCCBSSHHHHHHHHCC
T ss_pred             CcccCCCCCcccCcCceeEEEEECCCCeeeeeEeCCccCCccCcCCHHHHhhhCcC
Confidence            57999999999999999999999999999999999999999999999999999975

>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: alpha-Dendrotoxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

Probab=99.73  E-value=1.7e-18  Score=132.55  Aligned_cols=56  Identities=32%  Similarity=0.856  Sum_probs=54.2

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      ..++|.||++.|.|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+.+|.
T Consensus         3 ~~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GCgGN~N~F~t~~~C~~~C~   58 (59)
T d1dtxa_           3 RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI   58 (59)
T ss_dssp             SSGGGGSCCCCCSSSCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHT
T ss_pred             cCCcCCCCCCCccCcCceeEEEEECCCCcEeeeEcCCccCCccCcCCHHHHHhhCC
Confidence            57899999999999999999999999999999999999999999999999999996

>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-18  Score=130.55  Aligned_cols=54  Identities=37%  Similarity=0.975  Sum_probs=52.3

Q ss_pred             CcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        46 ~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      ..|.||++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+.+|.
T Consensus         2 a~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~NnF~t~~~C~~~C~   55 (56)
T d1bika2           2 AACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCG   55 (56)
T ss_dssp             GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             ccccCCCCcccCCCceeEEEEECCCCcEeeeEcCCeeCCccCcCCHHHHHhhCc
Confidence            479999999999999999999999999999999999999999999999999996

>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Dendrotoxin K
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]

Probab=99.72  E-value=2.7e-18  Score=130.48  Aligned_cols=55  Identities=38%  Similarity=0.859  Sum_probs=53.2

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .++|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|.
T Consensus         2 ~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~GN~NnF~t~~~C~~~C~   56 (57)
T d1dtka_           2 AKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV   56 (57)
T ss_dssp             CGGGGCCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             CcccCCCCCCcCCCCceeEEEEECCCCCEeeeEcCCccCccCCcCCHHHHHhhCC
Confidence            4689999999999999999999999999999999999999999999999999996

>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Trypsin inhibitor
species: Sea anemone (Stichodactyla helianthus) [TaxId: 6123]

Probab=99.72  E-value=2.5e-18  Score=129.88  Aligned_cols=53  Identities=47%  Similarity=1.086  Sum_probs=51.8

Q ss_pred             cccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        47 ~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      +|.+|++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+++|.
T Consensus         2 vC~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~   54 (55)
T d1shpa_           2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR   54 (55)
T ss_dssp             GGGCCCCCCSSCCCCEEEEEETTTTEEEEEECCSTTCCSSCBSSHHHHHHHHC
T ss_pred             ccCCCCCcccCCCceeEEEEECCCCCEeeeEcCCccCCccCcCCHHHHHHHcC
Confidence            79999999999999999999999999999999999999999999999999996

>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3e-18  Score=128.69  Aligned_cols=53  Identities=36%  Similarity=0.831  Sum_probs=51.3

Q ss_pred             cccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCC
Q psy10163         47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA   99 (615)
Q Consensus        47 ~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~   99 (615)
                      .|.||++.|+|.+.++|||||+.+++|++|+|+||+||.|||.|+++|+.+|.
T Consensus         1 aC~~p~~~G~C~~~~~r~yyd~~~~~C~~F~Y~GC~GN~NnF~t~~~C~~~C~   53 (54)
T d1bika1           1 SCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCR   53 (54)
T ss_dssp             CTTSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             CCCCCCCccCCCCceeEEEEECCCCcEeeeEeCCccCCccCcCCHHHHHHHcC
Confidence            38999999999999999999999999999999999999999999999999996

>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.1e-18  Score=132.23  Aligned_cols=57  Identities=49%  Similarity=1.013  Sum_probs=54.5

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      ..++|.+|++.|.|.+.+.|||||+.+++|+.|+|+||+||.|||.|+++|+.+|..
T Consensus         5 ~~d~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GCgGN~NnF~t~~~C~~~C~~   61 (63)
T d1zr0b1           5 NAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR   61 (63)
T ss_dssp             THHHHTSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHTSC
T ss_pred             cCcccCCCCCcccCCCceeEEEEECCCCcEeeeEcCCccCCCcCcCCHHHHHHhhcC
Confidence            457899999999999999999999999999999999999999999999999999975

>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Pancreatic trypsin inhibitor, BPTI
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=6.5e-18  Score=129.03  Aligned_cols=56  Identities=36%  Similarity=0.978  Sum_probs=54.0

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      +++|++|++.|.|.+.+.|||||..+++|++|+|+||+||.|+|.|+++|+.+|..
T Consensus         2 P~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~~C~~~C~g   57 (58)
T d1g6xa_           2 PDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG   57 (58)
T ss_dssp             CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHCC
T ss_pred             cchhcCCCCCccCcCceeEEEEECCCCceeeeEcCCccCCcCCcCCHHHHHHHcCC
Confidence            57899999999999999999999999999999999999999999999999999964

>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.3e-17  Score=127.51  Aligned_cols=56  Identities=38%  Similarity=0.878  Sum_probs=54.3

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      +++|.||++.|.|.+.+.|||||+.+++|++|+|+||+||.|+|.|+++|+++|..
T Consensus         2 P~~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~gn~N~F~t~~~C~~~C~~   57 (58)
T d1tfxc_           2 PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED   57 (58)
T ss_dssp             CGGGGSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHTTT
T ss_pred             cccccCCCCCCCCCCceeeEEEECCCCcEeeeEcCCccCCccCcCCHHHHHHHccC
Confidence            67999999999999999999999999999999999999999999999999999975

>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Alzheimer's amyloid B-protein precursor, APPI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9e-18  Score=127.14  Aligned_cols=54  Identities=46%  Similarity=1.125  Sum_probs=52.7

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      ++|++|++.|+|.+.+.|||||+++++|++|+|+||+||.|||.|+++|+++|+
T Consensus         3 d~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GCgGN~NnF~t~~~C~~~CG   56 (56)
T d1aapa_           3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG   56 (56)
T ss_dssp             GGGGBCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             cccCCCCCCcCCCCceeEEEEECCCCcEeeeEcCCccCCccCcCCHHHHHHhhC
Confidence            689999999999999999999999999999999999999999999999999996

>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: beta2-bungarotoxin, neurotoxin chain
species: Many-banded krait (Bungarus multicinctus) [TaxId: 8616]

Probab=99.69  E-value=9.1e-18  Score=129.48  Aligned_cols=57  Identities=35%  Similarity=0.775  Sum_probs=54.3

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCC
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG  101 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~  101 (615)
                      ..+|.+|++.|.|.+.++|||||+.+++|+.|+|+||+||.|||.|+++|+.+|...
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~~~   60 (61)
T d1bunb_           4 HPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY   60 (61)
T ss_dssp             CTTTTSCCCCCCSSSCEEEEEEEGGGTEEEEEEECSCCSSSCCBSSHHHHHHHHCCC
T ss_pred             CCcCCCCCCcccCCCceeEEEEECCCCceeEeEcCCccCccCCcCCHHHHHhhcccc
Confidence            568999999999999999999999999999999999999999999999999999753

>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-17  Score=128.98  Aligned_cols=57  Identities=40%  Similarity=0.902  Sum_probs=54.7

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|++|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+.+|..
T Consensus         4 ~P~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~gn~N~F~t~~~C~~~C~~   60 (61)
T d1irha_           4 GPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK   60 (61)
T ss_dssp             CCSSSSSCCCCSSSCCCCCEEEECTTTCSEEEECCCCSSCCSCCBSSSHHHHHHHTC
T ss_pred             CchhhcCCCCCccCCCceeeEEEECCCCceeeeEcCCCcCCcCCcCCHHHHHHHccC
Confidence            468899999999999999999999999999999999999999999999999999975

>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb) {Banded krait (Bungarus fasciatus) [TaxId: 8613]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Venom basic protease inhibitor IX (VIIIb)
species: Banded krait (Bungarus fasciatus) [TaxId: 8613]

Probab=99.67  E-value=2.4e-17  Score=128.76  Aligned_cols=58  Identities=40%  Similarity=0.874  Sum_probs=55.3

Q ss_pred             CCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        45 ~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      +++|.||++.|.|.+.+.|||||..+++|++|+|+||+||.|+|.|+++|+.+|....
T Consensus         4 p~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~~~   61 (65)
T d1jc6a_           4 PTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKY   61 (65)
T ss_dssp             CCGGGSCCCCCSCCCCCCEEEEETTTTEEEEECCCSSCCCSSCBSSHHHHHHHTSCCC
T ss_pred             cchhcCCCCCccCCCceeEEEEECCCCceeeeEcCCccCCccCcCCHHHHHHHhcccC
Confidence            5789999999999999999999999999999999999999999999999999998653

>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: alpha-Dendrotoxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

Probab=99.67  E-value=2.2e-17  Score=126.35  Aligned_cols=56  Identities=38%  Similarity=0.913  Sum_probs=53.8

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      .++|++|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|..
T Consensus         4 ~~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GCgGN~N~F~t~~~C~~~C~G   59 (59)
T d1dtxa_           4 RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG   59 (59)
T ss_dssp             SGGGGSCCCCCSSSCCEEEEEEETTTTEEEEEEECSSCCCSCCBSSHHHHHHHHTC
T ss_pred             CCcCCCCCCCccCcCceeEEEEECCCCcEeeeEcCCccCCccCcCCHHHHHhhCCC
Confidence            47899999999999999999999999999999999999999999999999999963

>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Collagen type VI (domain C5 from alpha 3 chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.3e-17  Score=125.85  Aligned_cols=55  Identities=42%  Similarity=1.081  Sum_probs=53.6

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|.+
T Consensus         3 d~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GCgGN~N~F~t~~~C~~~C~~   57 (58)
T d1ktha_           3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP   57 (58)
T ss_dssp             GGGGSCCCCCBSSCCEEEEEEETTTTEEEEEEECSBSCCSCCBSSHHHHHHHHCC
T ss_pred             cccCCCCCcccCcCceeEEEEECCCCeeeeeEeCCccCCccCcCCHHHHhhhCcC
Confidence            6899999999999999999999999999999999999999999999999999986

>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.1e-17  Score=125.09  Aligned_cols=54  Identities=41%  Similarity=0.932  Sum_probs=52.4

Q ss_pred             CccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       498 ~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      .|++|++.|+|.+.+.|||||+++++|++|+|+||+||.|||.|+++|++.|+.
T Consensus         3 ~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~NnF~t~~~C~~~C~V   56 (56)
T d1bika2           3 ACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGV   56 (56)
T ss_dssp             GGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCC
T ss_pred             cccCCCCcccCCCceeEEEEECCCCcEeeeEcCCeeCCccCcCCHHHHHhhCcC
Confidence            699999999999999999999999999999999999999999999999999974

>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Dendrotoxin K
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]

Probab=99.67  E-value=3.1e-17  Score=124.52  Aligned_cols=55  Identities=40%  Similarity=0.898  Sum_probs=53.0

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      .+|.+|++.|+|.+.+.|||||+.+++|++|+|+||+||.|||.|+++|+++|..
T Consensus         3 ~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~GN~NnF~t~~~C~~~C~G   57 (57)
T d1dtka_           3 KYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG   57 (57)
T ss_dssp             GGGGCCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCC
T ss_pred             cccCCCCCCcCCCCceeEEEEECCCCCEeeeEcCCccCccCCcCCHHHHHhhCCC
Confidence            5899999999999999999999999999999999999999999999999999963

>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Trypsin inhibitor
species: Sea anemone (Stichodactyla helianthus) [TaxId: 6123]

Probab=99.66  E-value=3.4e-17  Score=123.55  Aligned_cols=54  Identities=41%  Similarity=0.921  Sum_probs=52.2

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      ++|.+|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|.
T Consensus         1 svC~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~   54 (55)
T d1shpa_           1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR   54 (55)
T ss_dssp             CGGGCCCCCCSSCCCCEEEEEETTTTEEEEEECCSTTCCSSCBSSHHHHHHHHC
T ss_pred             CccCCCCCcccCCCceeEEEEECCCCCEeeeEcCCccCCccCcCCHHHHHHHcC
Confidence            379999999999999999999999999999999999999999999999999996

>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Calcicludine (cac)
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

Probab=99.66  E-value=2.3e-17  Score=126.88  Aligned_cols=57  Identities=33%  Similarity=0.841  Sum_probs=54.4

Q ss_pred             CCCcccCCCccCCCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCC
Q psy10163         44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG  100 (615)
Q Consensus        44 ~~~~C~~~~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~  100 (615)
                      .+++|.+|++.|.|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+.+|..
T Consensus         3 pp~~C~~p~~~G~C~~~~~r~~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~   59 (60)
T d1bf0a_           3 PPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG   59 (60)
T ss_dssp             CCSGGGCCCCCCCSSCCEEEEEEETTTTEEEEEEECSTTCCSCCBSSTTTTHHHHTC
T ss_pred             CChHhCCCCCCccCCCceeeEEEECCCCceeeeEcCCccCCcCCcCCHHHHHHHcCC
Confidence            367899999999999999999999999999999999999999999999999999974

>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Bikunin from inter-alpha-inhibitor complex
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.3e-17  Score=121.83  Aligned_cols=52  Identities=37%  Similarity=0.962  Sum_probs=50.9

Q ss_pred             ccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhcc
Q psy10163        499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG  550 (615)
Q Consensus       499 C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~  550 (615)
                      |++|++.|+|.+.+.|||||+.+++|+.|+|+||+||.|||.|+++|++.|.
T Consensus         2 C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~Y~GC~GN~NnF~t~~~C~~~C~   53 (54)
T d1bika1           2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCR   53 (54)
T ss_dssp             TTSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC
T ss_pred             CCCCCCccCCCCceeEEEEECCCCcEeeeEeCCccCCccCcCCHHHHHHHcC
Confidence            8999999999999999999999999999999999999999999999999995

>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain {Many-banded krait (Bungarus multicinctus) [TaxId: 8616]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: beta2-bungarotoxin, neurotoxin chain
species: Many-banded krait (Bungarus multicinctus) [TaxId: 8616]

Probab=99.64  E-value=7.3e-17  Score=124.35  Aligned_cols=56  Identities=32%  Similarity=0.760  Sum_probs=54.1

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      ..|.+|++.|+|.+.+.|||||+.+++|+.|.|+||+||.|+|.|+++|+++|..+
T Consensus         5 ~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~GN~N~F~t~~~C~~~C~~~   60 (61)
T d1bunb_           5 PDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY   60 (61)
T ss_dssp             TTTTSCCCCCCSSSCEEEEEEEGGGTEEEEEEECSCCSSSCCBSSHHHHHHHHCCC
T ss_pred             CcCCCCCCcccCCCceeEEEEECCCCceeEeEcCCccCccCCcCCHHHHHhhcccc
Confidence            57999999999999999999999999999999999999999999999999999875

>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Pancreatic trypsin inhibitor, BPTI
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.64  E-value=8.6e-17  Score=122.73  Aligned_cols=55  Identities=33%  Similarity=0.902  Sum_probs=53.4

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|++|++.|.|.+.+.|||||+++++|+.|+|+||+||.|+|.|+++|+.+|+.
T Consensus         3 ~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~~C~~~C~g   57 (58)
T d1g6xa_           3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG   57 (58)
T ss_dssp             GGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHHCC
T ss_pred             chhcCCCCCccCcCceeEEEEECCCCceeeeEcCCccCCcCCcCCHHHHHHHcCC
Confidence            6899999999999999999999999999999999999999999999999999985

>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.5e-17  Score=125.01  Aligned_cols=57  Identities=44%  Similarity=0.996  Sum_probs=54.4

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      .++|++|++.|+|...+.|||||+.+++|+.|+|+||+||.|||.|+++|+++|...
T Consensus         6 ~d~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GCgGN~NnF~t~~~C~~~C~~~   62 (63)
T d1zr0b1           6 AEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRI   62 (63)
T ss_dssp             HHHHTSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSCCCSSCBSSHHHHHHHTSCC
T ss_pred             CcccCCCCCcccCCCceeEEEEECCCCcEeeeEcCCccCCCcCcCCHHHHHHhhcCC
Confidence            378999999999999999999999999999999999999999999999999999863

>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.9e-16  Score=120.80  Aligned_cols=55  Identities=40%  Similarity=1.023  Sum_probs=53.4

Q ss_pred             CCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       497 ~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      ++|.++++.|.|...+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|..
T Consensus         3 ~~C~~p~~~G~C~~~~~rwyyd~~~~~C~~F~y~GC~gn~N~F~t~~~C~~~C~~   57 (58)
T d1tfxc_           3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED   57 (58)
T ss_dssp             GGGGSCCCCCSBCCCEEEEEEETTTTEEEEEEECSSSCCSSCBSSHHHHHHHTTT
T ss_pred             ccccCCCCCCCCCCceeeEEEECCCCcEeeeEcCCccCCccCcCCHHHHHHHccC
Confidence            6899999999999999999999999999999999999999999999999999974

>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Tissue factor pathway inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.4e-16  Score=121.48  Aligned_cols=56  Identities=30%  Similarity=0.851  Sum_probs=54.0

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|++|++.|+|...+.|||||+.+++|++|+|+||+||.|+|.|+++|+++|..
T Consensus         5 P~~C~~p~~~G~C~~~~~r~yyd~~~~~C~~F~y~GC~gn~N~F~t~~~C~~~C~~   60 (61)
T d1irha_           5 PSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK   60 (61)
T ss_dssp             CSSSSSCCCCSSSCCCCCEEEECTTTCSEEEECCCCSSCCSCCBSSSHHHHHHHTC
T ss_pred             chhhcCCCCCccCCCceeeEEEECCCCceeeeEcCCCcCCcCCcCCHHHHHHHccC
Confidence            47899999999999999999999999999999999999999999999999999975

>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb) {Banded krait (Bungarus fasciatus) [TaxId: 8613]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Venom basic protease inhibitor IX (VIIIb)
species: Banded krait (Bungarus fasciatus) [TaxId: 8613]

Probab=99.61  E-value=3.7e-16  Score=121.89  Aligned_cols=58  Identities=40%  Similarity=0.882  Sum_probs=55.2

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCCc
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR  553 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~~  553 (615)
                      +++|.||++.|+|.+.+.|||||+.+++|+.|+|+||+||.|+|.|+++|+++|....
T Consensus         4 p~~C~~p~~~G~C~~~~~rw~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~~~   61 (65)
T d1jc6a_           4 PTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKY   61 (65)
T ss_dssp             CCGGGSCCCCCSCCCCCCEEEEETTTTEEEEECCCSSCCCSSCBSSHHHHHHHTSCCC
T ss_pred             cchhcCCCCCccCCCceeEEEEECCCCceeeeEcCCccCCccCcCCHHHHHHHhcccC
Confidence            4789999999999999999999999999999999999999999999999999998743

>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Small Kunitz-type inhibitors & BPTI-like toxins
domain: Calcicludine (cac)
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

Probab=99.61  E-value=2.4e-16  Score=121.06  Aligned_cols=56  Identities=34%  Similarity=0.761  Sum_probs=53.8

Q ss_pred             CCCccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccC
Q psy10163        496 NDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE  551 (615)
Q Consensus       496 ~~~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~  551 (615)
                      +++|.+|++.|.|.+.+.|||||+.+++|+.|.|+||+||.|+|.|+++|+++|..
T Consensus         4 p~~C~~p~~~G~C~~~~~r~~yd~~~~~C~~F~y~GC~gN~N~F~t~~eC~~~C~~   59 (60)
T d1bf0a_           4 PWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG   59 (60)
T ss_dssp             CSGGGCCCCCCCSSCCEEEEEEETTTTEEEEEEECSTTCCSCCBSSTTTTHHHHTC
T ss_pred             ChHhCCCCCCccCCCceeeEEEECCCCceeeeEcCCccCCcCCcCCHHHHHHHcCC
Confidence            36899999999999999999999999999999999999999999999999999975

>d1udka_ g.3.14.1 (A:) Nawaprin {Spitting cobra (Naja nigricollis) [TaxId: 8654]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Elafin-like
family: Elafin-like
domain: Nawaprin
species: Spitting cobra (Naja nigricollis) [TaxId: 8654]

Probab=98.70  E-value=3.6e-09  Score=76.69  Aligned_cols=43  Identities=35%  Similarity=0.995  Sum_probs=37.2

Q ss_pred             CCCCCCCCC-----CCCcCCCCCCCCCcccCCCccccCCCCC-ccCCcc
Q psy10163        269 YKEGECRPQ-----PQNVCADNCKDDADCTGQAKCCPNDCGY-SCSNLF  311 (615)
Q Consensus       269 ~k~g~Cp~~-----~~~~C~~~C~~dadc~~~~kCC~~~Cg~-~C~~p~  311 (615)
                      .|+|.||.+     ..+.|..+|.+|+||+|.+|||.||||. +|+.|+
T Consensus         2 eK~G~CP~~~~~~~~~~~C~~~C~~D~dCpg~~KCC~ngCG~~tC~~P~   50 (51)
T d1udka_           2 EKSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCGFMTCTTPV   50 (51)
T ss_dssp             CCSSBCCTTCCCCCCSSCCCCCCSSGGGSSTTCEEECCSSSSCEEECCB
T ss_pred             CCCccCcCCCCCccccchhhhhCcCccCCCCcCeecCCCCCCCcccCCC
Confidence            489999933     3456999999999999999999999994 799875

>d1flei_ g.3.14.1 (I:) Elafin, elastase-specific inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Elafin-like
family: Elafin-like
domain: Elafin, elastase-specific inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.3e-08  Score=72.52  Aligned_cols=43  Identities=33%  Similarity=0.702  Sum_probs=37.8

Q ss_pred             CCCCCCCCC----CCCcCCCCCCCCCcccCCCccccCCCCCccCCcc
Q psy10163        269 YKEGECRPQ----PQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLF  311 (615)
Q Consensus       269 ~k~g~Cp~~----~~~~C~~~C~~dadc~~~~kCC~~~Cg~~C~~p~  311 (615)
                      .|+|.||.+    ....|...|.+|+||++..|||+++||..|+.|.
T Consensus         1 tKpG~CP~v~~~c~~~~p~n~C~~D~~Cpg~~KCC~~~Cg~~C~~P~   47 (47)
T d1flei_           1 TKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVPQ   47 (47)
T ss_dssp             CCSSCCCCCCEEESCSSCCCSCSSGGGSSSSCEEEECSSSEEEECCC
T ss_pred             CcCccCcCCCCccccCCCcccCcccccCCCCCcccCCCCcCccCCCC
Confidence            489999933    5667889999999999999999999999998873

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=98.44  E-value=2.6e-08  Score=81.56  Aligned_cols=77  Identities=32%  Similarity=0.497  Sum_probs=61.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.++...+.  .+++.+ .++.|.|.++...|+|.|.|.|.|..|. ....+.|.
T Consensus        12 ~~~v~~G~~~~l~C~~~g~P~p~v~W~~~~~~i~--~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~   87 (89)
T d1biha4          12 VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLS--GGRATV-TDSGLVIKGVKNGDKGYYGCRATNEHGD-KYFETLVQ   87 (89)
T ss_dssp             EEEECTTSCEEEECEEEEESCCCCEEEETTEECC--SSSEEE-ETTEEEESSCCSTTCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             CEEEeCCCeEEEEEEEEEeCCCEEEEEeCCccCc--cccEEE-eeeeEEECCCChhhCEEEEEEEEECCCE-EEEEEEEE
Confidence            4567899999999999999999999998666553  345544 4567999999999999999999999997 45555554


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        88 V   88 (89)
T d1biha4          88 V   88 (89)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=1e-07  Score=77.92  Aligned_cols=82  Identities=26%  Similarity=0.430  Sum_probs=63.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC----CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~----gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.++...+............    ..|.|.++...|+|.|.|.+.|..|......
T Consensus         5 ~~~v~~G~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~S~~   84 (91)
T d1rhfa1           5 KLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQP   84 (91)
T ss_dssp             EEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCC
T ss_pred             eEEEcCCCeEEEEEEEEecCCceEEEEEeecccccceeeeeeecccCceeeEEECCCCcccCEEEEEEEEECCCCEEEEE
Confidence            467789999999999999999999999876665433332332222    2688999999999999999999999755566


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.|.|.
T Consensus        85 ~~l~V~   90 (91)
T d1rhfa1          85 VWLTVE   90 (91)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            666664

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.39  E-value=3.1e-08  Score=81.32  Aligned_cols=77  Identities=31%  Similarity=0.463  Sum_probs=60.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      ..+.+.+|+.++|.|.+.|+|.|.|.|.+...    .........++.|.|.++...|+|.|.|.|.|..|. ....+.|
T Consensus        13 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~----~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l   87 (91)
T d1cs6a3          13 ADTYALTGQMVTLECFAFGNPVPQIKWRKLDG----SQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGR-DTYQGRI   87 (91)
T ss_dssp             SEEEEETTCCEEEECEEEEESCCEEEEEECCS----CCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEE
T ss_pred             CcEEEecCCcEEEEEEEEEccCCEEEEEeccc----ccceEeeeeeeEEEeCCCCccCCEEEEEEEEECCCE-EEEEEEE
Confidence            45678899999999999999999999986321    122223445678999999999999999999999997 4555555


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        88 ~V   89 (91)
T d1cs6a3          88 II   89 (91)
T ss_dssp             EE
T ss_pred             EE
Confidence            55

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.37  E-value=9.4e-08  Score=78.17  Aligned_cols=79  Identities=28%  Similarity=0.510  Sum_probs=63.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|+|.++...+.. ..++ ....+.|.|..+...|+|.|.|.|.|..|. ....+.|.
T Consensus        10 ~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~-~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~   86 (89)
T d1cs6a4          10 DTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLAS-QNRI-EVSGGELRFSKLVLEDSGMYQCVAENKHGT-VYASAELT   86 (89)
T ss_dssp             CEEEETTCCEEEECEEEEESCCEEEEEETTEECCC-CSSE-EEETTEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             CEEECCCCcEEEEEEEEEEcCCEEEEEEeeccccc-ccee-eeeeeeEEEEeecccCCEEEEEEEEeCCCE-EEEEEEEE
Confidence            35677899999999999999999999986655542 2344 345679999999999999999999999997 55556665


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        87 V~   88 (89)
T d1cs6a4          87 VQ   88 (89)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2.1e-07  Score=75.13  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=58.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.+...        ........|.|.++...|+|.|.|.|.|..|. ....+.+.
T Consensus         8 ~~~v~~G~~~~L~C~~~g~p~P~i~W~~~~~--------~~~~~~~~l~i~~v~~~DsG~Y~C~a~N~~g~-~~~~~~v~   78 (84)
T d2nxyb2           8 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRG--------KNIQGGKTLSVSQLELQDSGTWTCTVLQNQKK-VEFKIDIV   78 (84)
T ss_dssp             SSCEETTCCEEEEEECCTTCCCEEEEECTTC--------CEEEESSEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEC
T ss_pred             CeEEECCCeEEEEEEeEcCCchheEEEeecc--------cceeeeeeeeeeecccccccEEEEEEEeCCCE-EEEEEEEE
Confidence            4457799999999999999999999987432        22344567899999999999999999999997 55566665


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |-
T Consensus        79 V~   80 (84)
T d2nxyb2          79 VL   80 (84)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=98.33  E-value=1.6e-07  Score=77.93  Aligned_cols=81  Identities=25%  Similarity=0.324  Sum_probs=64.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec-CC--eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-DG--VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~-~g--sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+..+...+.... ++  .|.|.++...|+|.|.|.+.|..|. .....
T Consensus        13 ~~~v~~g~~v~l~c~v~g~P~p~v~W~k~~~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~-~~~~~   91 (98)
T d1g1ca_          13 SQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGE-TSSHA   91 (98)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             cEEEcCCCcEEEEEEEEEecCCeEEEEeCceEEeeeeeeEEEeccceEEEEEeccCccccCEEEEEEEEECCcE-EEEEE
Confidence            35677899999999999999999999987777764444444333 33  6899999999999999999999997 55556


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|.
T Consensus        92 ~L~V~   96 (98)
T d1g1ca_          92 FLLVQ   96 (98)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66554

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=98.32  E-value=3.2e-07  Score=75.01  Aligned_cols=79  Identities=24%  Similarity=0.452  Sum_probs=61.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe---cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.++...+... .++.+.   ...+|.|.++...|+|.|.|.+.|..|. ....+
T Consensus         8 ~~~v~~G~~~~l~C~~~g~P~p~v~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~   85 (91)
T d1tnna_           8 SMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS-ARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGK-QEAEF   85 (91)
T ss_dssp             CEECSSSSCCCEEEECCCSSCCCCEEESSSSTTCSS-SSCEEEECSSEEEEECSSCCSCCCEEEEEECBCSSCB-CCEEE
T ss_pred             CEEEeCCCcEEEEEEEEEEeCCeEEEEEeecccccc-cceeeeeecceeEEeecCCCHHHCEEEEEEEEECCCE-EEEEE
Confidence            467889999999999999999999998765555432 233322   2347899999999999999999999997 55555


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus        86 ~l~V   89 (91)
T d1tnna_          86 TLTI   89 (91)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            5555

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.28  E-value=2.7e-07  Score=75.73  Aligned_cols=80  Identities=24%  Similarity=0.324  Sum_probs=61.1

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ..+.+.+|+.+.|.|.+.|+|.|.+.|.++...+.... ++.+..   ...|.|.++...|+|.|.|.|.|..|. ....
T Consensus        10 ~~~~v~~G~~~~l~c~~~g~P~p~v~W~~~~~~i~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~-~~~~   87 (93)
T d1wiua_          10 RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAP-ELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGE-DEAI   87 (93)
T ss_dssp             CEEEECSSBCCEEEEEEECCSSCEEEEECSSSSCBCST-TSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             CcEEEeCCCeEEEEEEEEEecCCeEEEEeeeeeceeee-eeeecccccceeeccccccccccEEEEEEEEECCCE-EEEE
Confidence            45778899999999999999999999988655554332 232222   236888999999999999999999997 5555


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.|
T Consensus        88 ~~l~V   92 (93)
T d1wiua_          88 FEVIV   92 (93)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55544

>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.2e-07  Score=77.78  Aligned_cols=80  Identities=19%  Similarity=0.185  Sum_probs=59.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCc-eeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG-IYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG-~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+..............|.|.++...|+| .|.|.|.|..|. ....+.|
T Consensus        11 ~~~v~~G~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~N~~G~-~~~s~~l   89 (92)
T d2ifga1          11 NASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGR-AEVSVQV   89 (92)
T ss_dssp             SSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEE-CCEEECC
T ss_pred             CEEEeCCCEEEEeeeccCCCCcEEEEEECCceeeeeeeeeeeccceeEEEccccccccceEEEEEEEcCCCE-EEEEEEE
Confidence            35577999999999999999999999875433322222222333457999999999999 699999999997 4555555


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        90 ~V   91 (92)
T d2ifga1          90 NV   91 (92)
T ss_dssp             CC
T ss_pred             EE
Confidence            44

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=98.24  E-value=5.1e-07  Score=74.70  Aligned_cols=82  Identities=20%  Similarity=0.426  Sum_probs=61.4

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecCC-CCceEEe---cCCeEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS-DGHYKLT---LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~-~g~~~~~---~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+... ..++...   ...+|.|..+...|+|.|.|.|.|..|.....
T Consensus        11 ~~~~~~~G~~v~l~C~~~g~P~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~s~   90 (97)
T d1biha3          11 KDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH   90 (97)
T ss_dssp             CSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEE
T ss_pred             CCEEEecCCeEEEEEEEEEecCCEEEEEEeeeeccccceeeeeeeeecCCCEEEEEeccccccEEEEEEEEECCCcEEEE
Confidence            3577889999999999999999999998866555432 2223221   23479999999999999999999999974333


Q ss_pred             ceeeee
Q psy10163        424 EFNVIV  429 (615)
Q Consensus       424 ~~~l~V  429 (615)
                      .+.|.|
T Consensus        91 s~~L~V   96 (97)
T d1biha3          91 SLKLTV   96 (97)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            444544

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=98.21  E-value=3.1e-07  Score=76.68  Aligned_cols=79  Identities=27%  Similarity=0.526  Sum_probs=62.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--cC--CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LD--GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--~~--gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.++...+... .++.+.  .+  ..|.|.++...|+|.|.|.|.|..|. ....
T Consensus        17 ~~~v~~G~~~~l~C~~~g~P~p~v~W~k~~~~i~~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~   94 (102)
T d1fhga_          17 DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES-RHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGE-ATCT   94 (102)
T ss_dssp             CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS-SSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             cEEEecCCcEEEEEEEEeccCCeEEEEeeeccccce-eeEeEEEecCceeeeEecCCCHHhCEEEEEEEEECCcE-EEEE
Confidence            466778999999999999999999999877666533 344433  22  26899999999999999999999997 5555


Q ss_pred             eeeee
Q psy10163        425 FNVIV  429 (615)
Q Consensus       425 ~~l~V  429 (615)
                      +.|.|
T Consensus        95 ~~L~V   99 (102)
T d1fhga_          95 AELLV   99 (102)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55555

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=4.7e-07  Score=73.41  Aligned_cols=77  Identities=23%  Similarity=0.354  Sum_probs=59.9

Q ss_pred             cccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.+.|.|.+. +.|.|.|.|.|+...+..  ++ ....+++|+|.++...|+|.|.|.|.|..|. ....+.|
T Consensus        11 ~~~v~~G~~~~l~C~~~~~~p~~~v~W~k~~~~~~~--~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l   86 (89)
T d1gl4b_          11 SQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP--SR-AMDFNGILTIRNVQPSDAGTYVCTGSNMFAM-DQGTATL   86 (89)
T ss_dssp             EEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC--TT-EEEETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEE
T ss_pred             eEEEeCCCcEEEEEEccCCCCCCEEEEecCCceeec--cc-cEeeceEEEEecCCcccCEEEEEEEEECCCE-EEEEEEE
Confidence            45678999999999997 789999999875433322  22 3445789999999999999999999999997 4555555


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        87 ~V   88 (89)
T d1gl4b_          87 HV   88 (89)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=8.2e-07  Score=73.94  Aligned_cols=81  Identities=22%  Similarity=0.287  Sum_probs=63.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|.++...+.. ..++.+....   .|.|.++...|+|.|.|.+.|..|. ....+
T Consensus         9 ~~~v~~G~~~~l~C~v~g~p~p~v~W~k~~~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~   86 (101)
T d2cqva1           9 DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQE-SEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGS-RQAQV   86 (101)
T ss_dssp             SEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCC-SSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCE-EECCE
T ss_pred             cEEEeCCCcEEEEEEEEecCCCEEEEEeCceeecc-CCcEEEEEecceeEEEEeeCCcccCEEEEEEEEECCCE-EEEEE
Confidence            45678999999999999999999999886655543 3344433222   5899999999999999999999997 66667


Q ss_pred             eeeecc
Q psy10163        426 NVIVRG  431 (615)
Q Consensus       426 ~l~V~~  431 (615)
                      .|.|.+
T Consensus        87 ~l~V~~   92 (101)
T d2cqva1          87 NLTVVD   92 (101)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            776644

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

Probab=98.19  E-value=5.5e-07  Score=74.50  Aligned_cols=79  Identities=29%  Similarity=0.497  Sum_probs=60.4

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--Cce-EEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--GHY-KLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g~~-~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.+.|.|.+.|+|.|.|.|.++...+....  ... ......+|.|.++...|+|.|.|.|.|..|. ....+.
T Consensus        15 ~~v~~G~~v~l~C~~~g~P~p~i~W~kng~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~   93 (97)
T d3dara1          15 HAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYH   93 (97)
T ss_dssp             EEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEE
T ss_pred             EEECCCCcEEEEEEEeEECCCEEEEEECCEeccccCceeeEEEcCCcEEEEECCCCcccCEEEEEEEEECCCE-EEEEEE
Confidence            356789999999999999999999988655553222  122 2234468999999999999999999999997 555555


Q ss_pred             eee
Q psy10163        427 VIV  429 (615)
Q Consensus       427 l~V  429 (615)
                      |.|
T Consensus        94 l~V   96 (97)
T d3dara1          94 LDV   96 (97)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            543

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.19  E-value=3.8e-07  Score=75.38  Aligned_cols=79  Identities=27%  Similarity=0.375  Sum_probs=62.5

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +.+.+|+.+.|.|.+.|.|.|.|.|.++...|.. ..++.+..++   .|.|.++...|+|.|.|.|.|..|. ....+.
T Consensus        11 ~~v~~G~~~~l~C~~~g~P~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~   88 (97)
T d1koaa1          11 TEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQ-SVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGT-KEEIVF   88 (97)
T ss_dssp             CEEETTSCEEEEEEEECSSCCEEEEEETTEECCS-BTTBBCCCSTTEEEEEESCCCSGGGSCEEEEEEETTEE-EEEEEC
T ss_pred             EEEeCCCcEEEEEEEEEcCCCEEEEEEeeeccce-eeEEEEEecCCeeEEEeCCCceecCEEEEEEEEECCCE-EEEEEE
Confidence            4577899999999999999999999887666643 3445444333   5899999999999999999999997 555566


Q ss_pred             eeec
Q psy10163        427 VIVR  430 (615)
Q Consensus       427 l~V~  430 (615)
                      |.|.
T Consensus        89 l~V~   92 (97)
T d1koaa1          89 LNVT   92 (97)
T ss_dssp             CEEE
T ss_pred             EEEe
Confidence            6664

>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.18  E-value=5.8e-07  Score=73.66  Aligned_cols=71  Identities=21%  Similarity=0.332  Sum_probs=58.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeec-CCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~-~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.+.|.|.+.|.|.|.++|.++...+. ....++....+++|.|.++...|+|.|.|.|.|..+.
T Consensus        10 ~~~v~~G~~~~l~C~v~g~p~p~v~W~~~~~~i~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~   81 (92)
T d1epfa2          10 PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG   81 (92)
T ss_dssp             SEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred             CEEEeCCCcEEEEEEEeecCCCeEEEEEcCcccccccceeeeeeeeeeEEECCCCHHhCEEEEEEEEECcCC
Confidence            3567799999999999999999999987554444 3445667777789999999999999999999987554

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.17  E-value=4.6e-07  Score=75.30  Aligned_cols=79  Identities=29%  Similarity=0.506  Sum_probs=60.2

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCC--C-ceEEe-cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD--G-HYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~--g-~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      +.+.+|+.++|.|.+.|.|.|.|.|.++...+....  . ..... ..+.|.|.++...|+|.|.|.|.|..|. ....+
T Consensus        15 ~t~~~G~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~   93 (100)
T d1qz1a3          15 ATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGE-QDASI   93 (100)
T ss_dssp             EETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             EEEcCCCCEEEEEEEEEecCCEEEEEeCCcccccccccceeEEeecCceEEEeCCCCcccCEEEEEEEEECCCE-EEEEE
Confidence            466789999999999999999999987655553221  2 22222 3457999999999999999999999997 55555


Q ss_pred             eeee
Q psy10163        426 NVIV  429 (615)
Q Consensus       426 ~l~V  429 (615)
                      .|.|
T Consensus        94 ~l~V   97 (100)
T d1qz1a3          94 HLKV   97 (100)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5555

>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.3e-07  Score=74.05  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=58.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.+....+. ..........+.|.|.++...|+|.|.|.|.|+.|. ....+.+.
T Consensus        10 ~~~~~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~-~~~~~~v~   87 (90)
T d1vcaa2          10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK-LEKGIQVE   87 (90)
T ss_dssp             EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC-SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE-EEEEEEEE
T ss_pred             cEEEECCCEEEEEEeccCCCCceEEEEecCccce-eeeeeeecCCcEEEEecccccccceEEEEEEeCCCE-EEEEEEEE
Confidence            3456789999999999999999999975332221 111222234457999999999999999999999987 55555554


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        88 V   88 (90)
T d1vcaa2          88 I   88 (90)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=98.15  E-value=8e-07  Score=72.79  Aligned_cols=78  Identities=26%  Similarity=0.353  Sum_probs=61.3

Q ss_pred             CcccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEe-cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLT-LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~-~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      ..+.+.+|+.++|.|.+.|.|.| .|.|.++...+........+. ..++|.|..+...|+|.|.|.|.|..|......+
T Consensus        10 ~~~~v~~g~~~~l~C~~~g~p~p~~v~W~~~g~~l~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~s~~v   89 (94)
T d1biha1          10 AEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVI   89 (94)
T ss_dssp             SEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred             CcEEEeCCCeEEEEEEecCCCCeeEEEEEeeeeeeeeecceeeecccceEEEEeccChhcCeEEEEEEEeCCCEEEEEEE
Confidence            35678899999999999999987 699988666665444444433 4578999999999999999999999997433333

>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7.5e-07  Score=73.85  Aligned_cols=82  Identities=23%  Similarity=0.388  Sum_probs=60.3

Q ss_pred             CcccccCCCeeeeeecccCCCCC-eeeccCCc-----eeecCCCCceEEecCC---eEEEeecc-ccCCceeeecCCCCC
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIP-VYTWSKGE-----VSIDGSDGHYKLTLDG---VLQIVGLV-RQDAGIYVCVAANGI  417 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~-----~~l~~~~g~~~~~~~g---sl~I~~~~-~~DsG~Y~C~a~n~~  417 (615)
                      ..+.+.+|+.++|.|.+.|.|.| .+.|.+..     .+......++.+...+   .|.|.++. ..|+|.|.|.|.|..
T Consensus        10 ~~~~v~~G~~v~l~C~v~g~P~p~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~   89 (101)
T d3b5ha1          10 SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSK   89 (101)
T ss_dssp             SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETT
T ss_pred             CcEEECcCCeEEEEEEEEecCCeeEEEEEeccceeeeecccCCCceEEEEeCCCEEEEEEeccccccCCEEEEEEEEECC
Confidence            34567899999999999999988 69997521     2222334556555443   68888887 579999999999999


Q ss_pred             Ccccccceeeeec
Q psy10163        418 GDPIRKEFNVIVR  430 (615)
Q Consensus       418 G~p~~~~~~l~V~  430 (615)
                      |. ....+.|.|+
T Consensus        90 G~-~~~~~~L~Vr  101 (101)
T d3b5ha1          90 GS-DQAIITLRVR  101 (101)
T ss_dssp             EE-EEEEEEEEEC
T ss_pred             CE-EEEEEEEEEC
Confidence            97 5666666653

>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Mucosal addressin cell adhesion molecule-1 (MADCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=6.9e-07  Score=73.10  Aligned_cols=76  Identities=22%  Similarity=0.254  Sum_probs=56.7

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCc-eEEecCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGH-YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~-~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      ..+.+.+|+.+.|.|.+. |.|.|.|+|.+...    ..+. ......+.|.|.++...|+|.|+|.|.|+.|. ....+
T Consensus        11 ~~~~~~~G~~~~l~C~~~~g~p~p~v~W~~~~~----~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~Asn~~g~-~~~s~   85 (90)
T d1gsma1          11 PVVAVALGASRQLTCRLACADRGASVQWRGLDT----SLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT-FQHTV   85 (90)
T ss_dssp             SEEEEETTCCEEEEEEECCSSTTCEEEEESSTT----TTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEE
T ss_pred             CeEEEEeCCcEEEEEEecCCCCccEEEEEEeee----eeeeeeccCceeeEEcCccChhhCCcEEEEEEeCCCc-EEEEE
Confidence            456778999999999875 89999999986322    1122 22233457999999999999999999999886 45444


Q ss_pred             eee
Q psy10163        426 NVI  428 (615)
Q Consensus       426 ~l~  428 (615)
                      .|.
T Consensus        86 ~l~   88 (90)
T d1gsma1          86 QLL   88 (90)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Semaphorin 4d Ig-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=5.5e-07  Score=74.02  Aligned_cols=69  Identities=19%  Similarity=0.346  Sum_probs=58.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+|+.+.|.|.+.| |.|.+.|.++...+.....++.+..+++|.|.++...|+|.|+|.|.|..|.
T Consensus         7 ~~~~~G~~~~l~C~~~g-~~~~v~W~~~g~~l~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~A~n~~g~   75 (92)
T d1olza1           7 HFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKN   75 (92)
T ss_dssp             EEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEECSS
T ss_pred             eeEeCCCEEEEEEEeec-cCCceeeecCcccceeeeeeeecceeeEEEECCCCHHHCcEEEEEEEEcCCC
Confidence            45678999999999999 6689999876555555667788888899999999999999999999988775

>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Interleukin-6 receptor alpha chain, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=3e-06  Score=69.67  Aligned_cols=71  Identities=18%  Similarity=0.230  Sum_probs=56.7

Q ss_pred             CcccccCCCeeeeeecccCCCC-CeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPI-PVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~-P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+.+.+|+.++|.|.+.|.|. +.|+|.|+...+. ...+.....++.|.|.++...|+|.|.|.+.|..+.
T Consensus        14 ~~v~~~~G~~v~L~C~~~g~~~~~~i~W~k~~~~l~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~   85 (93)
T d1n26a1          14 GVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAG-SHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG   85 (93)
T ss_dssp             TEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSS-CCCEEEEEESSEEEECSCCGGGCEEEEEESSSSCSC
T ss_pred             CCEEEeCCCcEEEEEEeecCCCCceEEEEEcccccc-ceeeEEecCCCEEEECCCChhcCEEEEEEECCcccc
Confidence            4567788999999999999875 5899988655553 334556667789999999999999999999876543

>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.04  E-value=1.2e-06  Score=72.38  Aligned_cols=74  Identities=27%  Similarity=0.469  Sum_probs=54.5

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCC-CceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD-GHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~-g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      +++.++|.|.+.|.|.|.|.|.++...+.... .+........|.|..+...|+|.|.|.|.|..|....+.+.|
T Consensus        21 ~~~~v~l~C~~~g~P~p~v~W~~ng~~i~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~N~~G~~~S~~a~L   95 (97)
T d1cs6a1          21 AEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASL   95 (97)
T ss_dssp             SCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEE
T ss_pred             CCCeEEEEEEEEEeCCCEEEEEEeeeeccCCCCceEEeeeeeEEEEecccccCCEEEEEEEEECCCEEEEEEEEE
Confidence            45789999999999999999988666664433 344444444556666889999999999999999733344443

>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.04  E-value=2.3e-06  Score=70.48  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=59.2

Q ss_pred             ccccCCCeeeeeecccCCC-CCeeeccC-CceeecCCCCceEEec----CCeEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        350 VEAEEGNFVTLRCIAIGYP-IPVYTWSK-GEVSIDGSDGHYKLTL----DGVLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P-~P~i~w~k-~~~~l~~~~g~~~~~~----~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      +.+.+|+.+.|.|.+.|.| .|.|.|.+ +...+.....++.+..    ..+|.|.++...|+|.|.|.|.|..|.....
T Consensus        10 ~~v~~G~~~~l~C~v~g~p~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~   89 (97)
T d1epfa1          10 GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEA   89 (97)
T ss_dssp             EEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEE
T ss_pred             EEEccCCcEEEEEEEEeccCCCEEEEEEeeeeeeeeccccEEEEeecCcceEEEcccCchhhceEEEEEEEeCCCcEEEE
Confidence            4567899999999999998 48999987 3334443444544332    2369999999999999999999999874444


Q ss_pred             ceeeee
Q psy10163        424 EFNVIV  429 (615)
Q Consensus       424 ~~~l~V  429 (615)
                      .+.|.|
T Consensus        90 tv~l~V   95 (97)
T d1epfa1          90 TVNVKI   95 (97)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            455444

>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.6e-06  Score=74.51  Aligned_cols=81  Identities=22%  Similarity=0.436  Sum_probs=58.7

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccCCceeecC----------------------------CCCceEEecC---CeE
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG----------------------------SDGHYKLTLD---GVL  396 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~----------------------------~~g~~~~~~~---gsl  396 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.|.|.++...+..                            ..+++.+...   ..|
T Consensus        17 ~~v~v~~G~~v~L~C~v~G~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L   96 (130)
T d1gxea_          17 DTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF   96 (130)
T ss_dssp             CEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred             CCEEEEcCCeEEEEEEEEEecCCeEEEeeCCeEccCCccceeeecccccccceeeecCCceeeccCceEEEEECCCEEEE
Confidence            457788999999999999999999999753222110                            0112222211   258


Q ss_pred             EEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        397 QIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       397 ~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      .|.++...|+|.|+|.|.|..|. ....+.|.|
T Consensus        97 ~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V  128 (130)
T d1gxea_          97 TVEGAEKEDEGVYTVTVKNPVGE-DQVNLTVKV  128 (130)
T ss_dssp             ECSCCCTTTCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred             EECcCChhcCEEEEEEEEECCCE-EEEEEEEEE
Confidence            99999999999999999999997 555666555

>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=3.5e-06  Score=69.20  Aligned_cols=79  Identities=20%  Similarity=0.269  Sum_probs=59.7

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ..+.+|+.++|.|.+.+ |.+.|.|.++...+.......+....+.|.|..+...|+|.|.|.|.|..|......+.|.|
T Consensus        13 ~~v~~g~~v~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~S~~~~L~V   91 (96)
T d1l6za2          13 TTVKELDSVTLTCLSND-IGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI   91 (96)
T ss_dssp             SEECTTSCEEEEECCCC-SSCEEEEEETTEECCCCTTEEEETTTTEEEECSCCGGGCEEEEEEEESSSCCEECCCCEEEE
T ss_pred             eEEeCCCeEEEEEccCC-CCCCEEEEEeeeecccccceeccCCceEEEEeccchhhceEEEEEEEeCCCCeEEEeEEEEE
Confidence            45678999999999876 55899998866655433333333345689999999999999999999999975455566665

>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Tyrosine-protein kinase receptor tyro3, second domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2e-06  Score=69.46  Aligned_cols=74  Identities=20%  Similarity=0.305  Sum_probs=56.3

Q ss_pred             cccccCCCeeeeeecccCCCCC-eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP-VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P-~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+.+|+.++|.|.+.|.|.| .|.|.|+...+....       .+.+.|......|+|.|.|.|.|..|....+.+.+
T Consensus        10 ~~~v~~G~~~~l~C~~~g~P~P~~i~W~k~g~~i~~~~-------~~~~~l~~~~~~d~G~Y~C~A~N~~G~~~S~~~~v   82 (85)
T d1rhfa2          10 DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA-------PSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTATV   82 (85)
T ss_dssp             CEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE-------ESSEEEEECCCSSCEEEEEEEEETTEEEECCCEEE
T ss_pred             cEEEcCCCEEEEEEEEecCCcceEEEEEECCEECCCCC-------CcceEEecCCccccEEEEEEEEcCCCcEEEEEEEE
Confidence            3567789999999999999999 899988765554221       23445566667899999999999999755556665


Q ss_pred             ee
Q psy10163        428 IV  429 (615)
Q Consensus       428 ~V  429 (615)
                      .|
T Consensus        83 ~V   84 (85)
T d1rhfa2          83 HL   84 (85)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.6e-06  Score=72.19  Aligned_cols=80  Identities=26%  Similarity=0.413  Sum_probs=58.3

Q ss_pred             CCcccccCCCeeeeeecccCCCCCeeeccCCceee----------cCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSI----------DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l----------~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      +..+.+.+|+.++|.|.+.|.|.|.|.|.++...+          ............++|.|.++...|+|.|.|.+.|.
T Consensus        11 ~~~v~v~~g~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~   90 (105)
T d1nbqa1          11 EPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEE   90 (105)
T ss_dssp             CSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEET
T ss_pred             CCeEEEeCCCeEEEEEEeCCCCCCeeEEEeeeeceeeeeeccceeeccccceeeecCceEEEecccccceeeEEEEEEEC
Confidence            45677889999999999999999999997632111          01111222334568999999999999999999999


Q ss_pred             CCcccccceee
Q psy10163        417 IGDPIRKEFNV  427 (615)
Q Consensus       417 ~G~p~~~~~~l  427 (615)
                      .|. ...++.+
T Consensus        91 ~G~-~~~~~~v  100 (105)
T d1nbqa1          91 GGN-SYGEVKV  100 (105)
T ss_dssp             TSS-CEECCEE
T ss_pred             CCC-EEEEEEE
Confidence            998 3344333

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

Probab=97.96  E-value=1.5e-06  Score=72.79  Aligned_cols=80  Identities=26%  Similarity=0.268  Sum_probs=54.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecC---CCCc---------eEE---ecCCeEEEeeccccCCceeeecC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG---SDGH---------YKL---TLDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~---~~g~---------~~~---~~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      .+.+.+|+.++|.|.+.|.|.|.|.|.+.......   ..+.         ...   .....|.|.++...|+|.|.|.|
T Consensus        14 ~~tv~~G~~v~l~C~v~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a   93 (109)
T d2fdbp2          14 NASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLA   93 (109)
T ss_dssp             CEEECTTCCEEEEEEEECSSCCEEEEEEEC-------------CEEEECCEEEEETTEEEEEEEECSCCGGGCEEEEEEE
T ss_pred             CEEEecCCcEEEEEEEEEcCCCeEEEEecCccCCceeccCCceeEeecccceeEEecCCcEEEEECCCCHHHCeEEEEEE
Confidence            46778999999999999999999999753211100   0010         011   11246899999999999999999


Q ss_pred             CCCCCcccccceeeee
Q psy10163        414 ANGIGDPIRKEFNVIV  429 (615)
Q Consensus       414 ~n~~G~p~~~~~~l~V  429 (615)
                      .|..|. ....+.|.|
T Consensus        94 ~N~~G~-~~~~~~L~V  108 (109)
T d2fdbp2          94 GNSIGI-SFHSAWLTV  108 (109)
T ss_dssp             ECSSCE-EEEEEEEEE
T ss_pred             EECCCE-EEEEEEEEE
Confidence            999997 444444443

>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.93  E-value=2.2e-06  Score=71.91  Aligned_cols=71  Identities=27%  Similarity=0.378  Sum_probs=57.0

Q ss_pred             cccccCCCeeeeeecc-cCCCCCeeeccCCceee--cCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSI--DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l--~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.+.|.|.+ .+.|.|.|.|.++...+  .....++....+++|.|.++...|+|.|.|.+.|..|.
T Consensus        13 ~v~v~eG~~~~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~   86 (105)
T d1cs6a2          13 PVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDF   86 (105)
T ss_dssp             CEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETT
T ss_pred             CEEEeCCCeEEEEEEccCCCCCCEEEEEEeeccccccccceeeeecCCCEEeecccccccCcEEEEEEEECCCC
Confidence            4678899999999997 69999999998743322  22334455556789999999999999999999998886

>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=4e-06  Score=68.78  Aligned_cols=71  Identities=23%  Similarity=0.286  Sum_probs=55.5

Q ss_pred             CCcccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      +..+.+.+|+.+.|.|.+ +.|.|.|.|.++...+..+..++.+...+   .|.|.++...|+|.|+|.|.|..+
T Consensus        13 ~~~~~v~~G~~v~l~c~v-~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~n~~~   86 (94)
T d1pd6a_          13 EPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEKC   86 (94)
T ss_dssp             CSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETTEEE
T ss_pred             CCCEEECcCCeEEEEEEE-CCCCceEEEEEcCccceeeeeeEeeeccCCeEEeecCCCCceecEEEEEEEeeEEE
Confidence            445678899999999997 55999999988766665455555544433   699999999999999999988543

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2e-06  Score=70.65  Aligned_cols=81  Identities=22%  Similarity=0.301  Sum_probs=56.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeec---cCCceeecCCCCceEEec---CCeEEEeeccccCCceeeecCCCCCCccc
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTW---SKGEVSIDGSDGHYKLTL---DGVLQIVGLVRQDAGIYVCVAANGIGDPI  421 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w---~k~~~~l~~~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~  421 (615)
                      ..+.+.+|+.++|.|.+.|.|.|.+.|   .++...+. ......+..   .++|.|.++...|+|.|.|.|.|..|...
T Consensus         9 ~~~~v~~G~~v~l~C~~~g~p~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   87 (96)
T d2c9aa1           9 QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAP-LKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI   87 (96)
T ss_dssp             CCEEECSSSCEEEEEEEESCCCSSCEEEEEETTBCCCC-EEEEEEEETTEEEEEEEECSCCGGGCSEEEEEEEETTEEEE
T ss_pred             CCEEEeCCCEEEEEEEEeecCCCcEEEEEeeeeeeeec-CCceeEEEeecCceEEEECCCCHHHCeEEEEEEEeCCCeEE
Confidence            346788999999999999999997664   22222221 111122222   24699999999999999999999999744


Q ss_pred             ccceeeee
Q psy10163        422 RKEFNVIV  429 (615)
Q Consensus       422 ~~~~~l~V  429 (615)
                      .....|.|
T Consensus        88 s~~a~L~V   95 (96)
T d2c9aa1          88 SNYAELVV   95 (96)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEE
Confidence            44445544

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=9.2e-07  Score=71.48  Aligned_cols=70  Identities=26%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      .+.+.+|+.+.|.|.+.|+|.|.|+|.++...+..           .+.+..+...|+|.|.|.|.|..|. ....+.|.
T Consensus        13 ~~~~~~G~~~~l~C~a~G~P~P~v~W~k~g~~~~~-----------~~~~~~v~~~d~G~Y~C~A~N~~G~-~~~~~~l~   80 (84)
T d2oz4a3          13 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP-----------IGESVTVTRDLEGTYLCRARSTQGE-VTREVTVN   80 (84)
T ss_dssp             EEEEETTCEECCCCCCEEESCCEEEEEETTTEECC-----------TTSCEECCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred             cEEEeCCCEEEEEEEEeEcCccEEEEEEeecccee-----------eeeeeccccCCCCEEEEEEEcCCCE-EEEEEEEE
Confidence            45677999999999999999999999874433221           1234567789999999999999997 55666666


Q ss_pred             ec
Q psy10163        429 VR  430 (615)
Q Consensus       429 V~  430 (615)
                      |.
T Consensus        81 V~   82 (84)
T d2oz4a3          81 VL   82 (84)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: B- and T-lymphocyte attenuator CD272
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4e-06  Score=69.91  Aligned_cols=82  Identities=17%  Similarity=0.170  Sum_probs=56.5

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccCCce-eecCCCCceE-EecCC-----eEEEeeccccCCceeeecCCCCCCcc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSKGEV-SIDGSDGHYK-LTLDG-----VLQIVGLVRQDAGIYVCVAANGIGDP  420 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k~~~-~l~~~~g~~~-~~~~g-----sl~I~~~~~~DsG~Y~C~a~n~~G~p  420 (615)
                      .+.+.+|+.+.|.|.+.|.| .|.|+|.|+.. +......... ...++     .|.|.++...|+|.|.|.|.|..|.-
T Consensus        12 ~~~v~~G~~v~L~C~v~g~p~~P~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~   91 (104)
T d2aw2a1          12 EHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLI   91 (104)
T ss_dssp             EEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             eEEEeCCCeEEEEEEEEeeCCCCEEEEEecCcccccccceeeeeEEecCCceEEEEEEccccHHHCCeEEEEEEcCCCeE
Confidence            35677999999999999999 59999987332 2222222222 22221     48899999999999999999998862


Q ss_pred             cccceeeeec
Q psy10163        421 IRKEFNVIVR  430 (615)
Q Consensus       421 ~~~~~~l~V~  430 (615)
                      ....+.|.|.
T Consensus        92 ~s~~~~l~V~  101 (104)
T d2aw2a1          92 ESHSTTLYVT  101 (104)
T ss_dssp             ECCCEEEEEE
T ss_pred             EEEEEEEEEE
Confidence            2334455543

>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.6e-06  Score=70.24  Aligned_cols=82  Identities=22%  Similarity=0.163  Sum_probs=60.8

Q ss_pred             cccccCCCeeeeeecccCCC---CCeeeccCCceee-cCCCCceEE-ec---------CCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP---IPVYTWSKGEVSI-DGSDGHYKL-TL---------DGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P---~P~i~w~k~~~~l-~~~~g~~~~-~~---------~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.|.|   .|.|.|.++.... ....+..+. ..         ...|.|.++...|+|.|.|.+.
T Consensus        13 ~~~v~~G~~v~l~C~v~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~   92 (110)
T d2avga1          13 DGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGGYRCEVS   92 (110)
T ss_dssp             CEEEETTSEEEEEEEEECCSCSSSCEEEEECSTTCCSTTTCSSSEEEEEEEETTTTEEEEEEEEESCCTTCCEEEEEEEE
T ss_pred             eEEEECCCCEEEEEeecCCCCCCCCEEEEEeCceeeecccCCceeEeeeeeEEecccCEEEEEEeccCHHHCcEEEEEEE
Confidence            36678999999999999999   6899998754332 222222221 11         1369999999999999999999


Q ss_pred             CCCCcccccceeeeecc
Q psy10163        415 NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~~  431 (615)
                      |..|. ....+.|.|.+
T Consensus        93 N~~G~-~~~~~~L~V~~  108 (110)
T d2avga1          93 TKDKF-DCSNFNLTVHE  108 (110)
T ss_dssp             ETTEE-EEEEEEEEEES
T ss_pred             ECCCe-EEEEEEEEEEe
Confidence            99998 56667777754

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.9e-06  Score=68.50  Aligned_cols=70  Identities=33%  Similarity=0.491  Sum_probs=52.5

Q ss_pred             cccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCC--------c-eEEecCCeEEEeeccccCCceeeecCCCCCCcc
Q psy10163        351 EAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDG--------H-YKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDP  420 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g--------~-~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p  420 (615)
                      .+.+|+.++|.|.+. |+|.|.|.|.++...+.....        . ......+.|.|.++...|+|.|.|.|.|..|..
T Consensus        13 ~v~~G~~v~l~C~~~~g~p~p~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~N~~G~~   92 (104)
T d1nbqa2          13 SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP   92 (104)
T ss_dssp             EEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred             EEecCCcEEEEEEeecCCCCCEEEEEECCEEccCCCceeEEeeCCcEEEeecccceEECCCCcccCcEEEEEEEECCCce
Confidence            456899999999985 899999999875444422111        1 112234578999999999999999999999973

>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=97.84  E-value=6.2e-06  Score=66.84  Aligned_cols=77  Identities=22%  Similarity=0.249  Sum_probs=58.2

Q ss_pred             ccccCCCeeeeeecccC-CCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIG-YPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G-~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.+ .|.+.+.|.|+...+..      ....+.|.|..+...|+|.|.|.|.|..|......+.+.
T Consensus        10 ~~v~eG~~v~L~C~~~~~~p~~~~~W~k~g~~~~~------~~~~~~l~i~~v~~~dsG~Y~C~a~n~~g~~~S~~v~l~   83 (88)
T d2fcba2          10 LEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF------SRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTIT   83 (88)
T ss_dssp             SEECTTCCEEEEEEEGGGCCCEEEEEEETTEEEEE------ESSCCEEEETTCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             CeEecCCeEEEEEEecCCCCCcEEEEEeecccccc------cccccccccCccCHHHCCeEEEEEEeCCCCEEeeeEEEE
Confidence            34678999999999975 46778999875544321      123457899999999999999999999887555667777


Q ss_pred             eccc
Q psy10163        429 VRGN  432 (615)
Q Consensus       429 V~~~  432 (615)
                      |.++
T Consensus        84 V~~P   87 (88)
T d2fcba2          84 VQAP   87 (88)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            7654

>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=5.5e-06  Score=69.25  Aligned_cols=78  Identities=23%  Similarity=0.250  Sum_probs=57.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--------------cCCeEEEeeccccCCce-eeecC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--------------LDGVLQIVGLVRQDAGI-YVCVA  413 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--------------~~gsl~I~~~~~~DsG~-Y~C~a  413 (615)
                      .+.+.+|+.++|.|.+.|+|.|.|.|.++...+..........              ....|.|..+...|.|. |+|.|
T Consensus        11 ~i~v~~G~~v~l~C~v~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~g~~Y~C~A   90 (107)
T d1iray3          11 TMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFA   90 (107)
T ss_dssp             EEECCTTCCEEEEEEEEECTTCEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGSSCEEEEE
T ss_pred             EEEEeCCCEEEEEEEeccCCCCeEEEEECCcccccccceeeeeeeeeccceeeecccceEEEEEeecchHHCCcEEEEEE
Confidence            3567889999999999999999999987655554332221110              11268999999999995 99999


Q ss_pred             CCCCCcccccceee
Q psy10163        414 ANGIGDPIRKEFNV  427 (615)
Q Consensus       414 ~n~~G~p~~~~~~l  427 (615)
                      .|..|. ....+.|
T Consensus        91 ~N~~G~-~~~~i~L  103 (107)
T d1iray3          91 KNTHGI-DAAYIQL  103 (107)
T ss_dssp             ECSSCE-EEEEEEE
T ss_pred             EeCCCe-EEEEEEE
Confidence            999997 4444433

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=7.2e-06  Score=68.77  Aligned_cols=80  Identities=28%  Similarity=0.468  Sum_probs=56.5

Q ss_pred             cccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCC---------ceEE-ecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        351 EAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDG---------HYKL-TLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g---------~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+|+.++|.|.+. |+|.|.|.|.++...+.....         .+.. ...+.|.|.++...|+|.|+|.|.|..|.
T Consensus        13 ~v~~G~~v~L~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~N~~G~   92 (110)
T d1f97a2          13 SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT   92 (110)
T ss_dssp             EEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSC
T ss_pred             EEecCCeEEEEEEeecCCCCCEEEEEeCCeEecCCCceeEEeecCceEEEeecccceEECCCCccCCEEEEEEEEECCCc
Confidence            466899999999986 899999999875444322211         1111 23347899999999999999999999997


Q ss_pred             ccc-cceeeeec
Q psy10163        420 PIR-KEFNVIVR  430 (615)
Q Consensus       420 p~~-~~~~l~V~  430 (615)
                      ... ..+.|.|.
T Consensus        93 ~~~s~~v~l~V~  104 (110)
T d1f97a2          93 AMRSEAAHMDAV  104 (110)
T ss_dssp             CEECCCEEEEEE
T ss_pred             EEEEEEEEEEEE
Confidence            432 34555553

>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=5.8e-06  Score=68.44  Aligned_cols=73  Identities=18%  Similarity=0.359  Sum_probs=54.8

Q ss_pred             CCcccccCCCeeeeeecccCCCCCeeeccCC--ceee--------cCCCCceEEecCCeEEEeeccccCCceeeecCCCC
Q psy10163        347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG--EVSI--------DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       347 e~~v~~~eg~~~tl~C~~~G~P~P~i~w~k~--~~~l--------~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ...+.+.+|+.++|.|.+.|.|.|.|.|.+.  ....        ............++|.|.++...|+|.|.|.+.|.
T Consensus         8 ~~~v~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tL~I~~v~~~D~G~Y~C~a~n~   87 (102)
T d1f97a1           8 QSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEE   87 (102)
T ss_dssp             CSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEET
T ss_pred             CCcEEEeCCCEEEEEEEcCCCCCCeEEEEeccccceeeeccccccccceeeEEEecCCEEEEeECCccCCEEEEEEEEEC
Confidence            3457788999999999999999999999752  1111        01111122334568999999999999999999999


Q ss_pred             CCc
Q psy10163        417 IGD  419 (615)
Q Consensus       417 ~G~  419 (615)
                      .|.
T Consensus        88 ~g~   90 (102)
T d1f97a1          88 GGQ   90 (102)
T ss_dssp             TSS
T ss_pred             CCC
Confidence            887

>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=97.77  E-value=9.9e-06  Score=65.76  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=56.7

Q ss_pred             ccccCCCeeeeeeccc-CCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAI-GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+. +.|.+.+.|.|+...+.      .....+.|.|..+...|+|.|.|.|.|..|......+.+.
T Consensus        12 ~~v~eG~~v~L~C~~~~~~p~~~~~W~kng~~~~------~~~~~~~l~I~~v~~~dsG~Y~C~a~n~~~~~~S~~v~it   85 (89)
T d1fnla2          12 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK------YFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNIT   85 (89)
T ss_dssp             SEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE------EEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             CeEccCCeEEEEEEecCCCCCcEEEEEEcccccc------eeccccccEECccceeccceEEEEEEeCCCCeEEeeEEEE
Confidence            3467999999999987 55677899987543332      1234557899999999999999999998886445556666


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |.+
T Consensus        86 V~E   88 (89)
T d1fnla2          86 ITQ   88 (89)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            643

>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Human (Homo sapiens), Ig repeat 27 [TaxId: 9606]

Probab=97.76  E-value=1.8e-05  Score=64.05  Aligned_cols=69  Identities=17%  Similarity=0.118  Sum_probs=55.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecCC---eEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .+.+.+|+.++|.|.+ +.|.|.+.|.++...+.. ..++.+..++   .|+|.++...|+|.|.|.++|..+.
T Consensus        10 d~~v~~G~~~~~~c~v-s~p~~~v~W~k~g~~i~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~n~~~s   81 (89)
T d1tiua_          10 GVEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLTA-SPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANAKSA   81 (89)
T ss_dssp             CEEEETTSCCCEEEBC-SSSSCCCBCCSSSCCCCS-SSSCEEEECSSCEEEECCSCCSCCCSEECCBCSSCBCC
T ss_pred             CEEEeCCCcEEEEEEE-CCCCcEEEEEEeeeeccc-ceeEEEEeeceeEEEEEcCCChhcCEEEEEEECceEEE
Confidence            4677899999999997 689999999987666643 3555555555   5999999999999999999886543

>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.2e-05  Score=66.89  Aligned_cols=81  Identities=16%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             ccccCCCeeeeeeccc-CCCCCeeeccCCc-eee-cCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCccccccee
Q psy10163        350 VEAEEGNFVTLRCIAI-GYPIPVYTWSKGE-VSI-DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFN  426 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~-G~P~P~i~w~k~~-~~l-~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~  426 (615)
                      +...+|+.+.|.|.+. +.|.|.|+|.++. .+. .......+....++|.|..+...|+|.|.|.+.|..|. ....+.
T Consensus        12 ~~~~~~e~~~l~C~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~~~   90 (101)
T d1iray1          12 LVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYC-LRIKIS   90 (101)
T ss_dssp             EEEETTSCEEECCCCCGGGCSSEEEEECSSTTSBCCCCTTSSEEEETTEEEETTCCGGGCEEEEEEEEETTEE-EEEEEE
T ss_pred             EEEeCCCeEEEEeeCCCCCCCceEEEEECCcccccccccceEEeccCCEEEeccceecCCEEEEEEEECCCCe-EEEEEE
Confidence            5677899999999885 7899999998743 222 22223334456679999999999999999999999997 666677


Q ss_pred             eeecc
Q psy10163        427 VIVRG  431 (615)
Q Consensus       427 l~V~~  431 (615)
                      |.|..
T Consensus        91 L~V~~   95 (101)
T d1iray1          91 AKFVE   95 (101)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            77743

>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=4.4e-06  Score=70.61  Aligned_cols=82  Identities=20%  Similarity=0.135  Sum_probs=59.6

Q ss_pred             cccccCCCeeeeeecccCCC---CCeeeccCCceeec--CCCCceEEec---------CCeEEEeeccccCCceeeecCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP---IPVYTWSKGEVSID--GSDGHYKLTL---------DGVLQIVGLVRQDAGIYVCVAA  414 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P---~P~i~w~k~~~~l~--~~~g~~~~~~---------~gsl~I~~~~~~DsG~Y~C~a~  414 (615)
                      .+.+.+|+.++|.|.+.|.|   .|.|.|.|+.....  ....++.+..         ...|.|.++...|+|.|.|.|.
T Consensus         9 ~~~v~~G~~v~l~C~v~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~   88 (113)
T d2dava1           9 GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVT   88 (113)
T ss_dssp             CCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEE
T ss_pred             eEEEeCCCEEEEEEEEccCCCCCCCEEEEEEeeccccccccceeeeeccceeeEeecCEEEEEEccCCHHHCeEEEEEEE
Confidence            35778999999999999999   58999976432221  1112221111         1258999999999999999999


Q ss_pred             CCCCcccccceeeeecc
Q psy10163        415 NGIGDPIRKEFNVIVRG  431 (615)
Q Consensus       415 n~~G~p~~~~~~l~V~~  431 (615)
                      |..|. ....+.|.|.+
T Consensus        89 N~~G~-~~~~~~L~V~~  104 (113)
T d2dava1          89 YKDKF-DSCSFDLEVHE  104 (113)
T ss_dssp             CSSCE-EEECCEEEEEC
T ss_pred             eCCCE-EEEEEEEEEEc
Confidence            99997 56667777754

>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: NT3 binding domain of trkC receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=3.4e-05  Score=64.18  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=53.1

Q ss_pred             CeeeeeecccCCCCCeeeccCCceeecCCCCce-EEecC-----CeEEEeeccccCCceeeecCCCCCCcccccceeeee
Q psy10163        356 NFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHY-KLTLD-----GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIV  429 (615)
Q Consensus       356 ~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~-~~~~~-----gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~V  429 (615)
                      ....+.|.+.|+|.|.|.|.++...+....... ....+     ..|.|..+...|+|.|.|.|.|..|. ....+.+.|
T Consensus        18 ~~~~i~~~v~G~P~P~v~W~~n~~~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~v~V   96 (105)
T d1wwca_          18 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHF   96 (105)
T ss_dssp             CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEEEEECC
T ss_pred             EEEEEEEEEEEeCCCeEEEEeCccccCCCcceeeeEEeecccceEEEEEeecccccceEEEEEEEcCCCE-EEEEEEEEE
Confidence            445677889999999999988766665332221 12111     25889999999999999999999997 555555555

>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2.5e-05  Score=65.51  Aligned_cols=76  Identities=18%  Similarity=0.252  Sum_probs=55.1

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEecC---------CeEEEeeccccCCceeeecCCCCCCcccccc
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---------GVLQIVGLVRQDAGIYVCVAANGIGDPIRKE  424 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~---------gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~  424 (615)
                      ++.+..+.|.+.|+|.|.|.|.++...|............         ..|.|.++...|+|.|.|.|.|..|. ....
T Consensus        14 ~~~~~ci~~~v~G~P~P~v~W~~ng~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~A~N~~G~-~~~~   92 (107)
T d1he7a_          14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASAS   92 (107)
T ss_dssp             CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred             EEEEEEEEEEEEEecCCeEEEEEeeeEccCccceeeeeeeeeeeeeccceEEEECcccHHHCcEEEEEEEeCCCE-EEEE
Confidence            3445556678999999999998876666544433322211         25889999999999999999999997 5555


Q ss_pred             eeeeec
Q psy10163        425 FNVIVR  430 (615)
Q Consensus       425 ~~l~V~  430 (615)
                      +.+.+.
T Consensus        93 i~v~v~   98 (107)
T d1he7a_          93 IMAAFM   98 (107)
T ss_dssp             EEECCC
T ss_pred             EEEEEE
Confidence            665553

>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=97.64  E-value=2.3e-05  Score=66.34  Aligned_cols=71  Identities=30%  Similarity=0.468  Sum_probs=55.0

Q ss_pred             ccccCCCeeeeeecc-cCCCCCeeeccCCceee--cC----CCCceEEecCCeEEEeeccccCCc---eeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIA-IGYPIPVYTWSKGEVSI--DG----SDGHYKLTLDGVLQIVGLVRQDAG---IYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~-~G~P~P~i~w~k~~~~l--~~----~~g~~~~~~~gsl~I~~~~~~DsG---~Y~C~a~n~~G~  419 (615)
                      ..+.||+.++|.|.+ .|.|.|.|.|.+....+  ..    ..-++.+..+++|.|.++...|+|   .|.|.|.|.+|.
T Consensus        12 ~t~~EG~~~~L~C~v~~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~gd~g~Y~C~A~N~~g~   91 (111)
T d1biha2          12 KTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVD   91 (111)
T ss_dssp             ECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCS
T ss_pred             ccccCCCeEEEEEEcccCCCCCEEEEEeCCccccccccceeeeeeeccccccccEEeeeEeeccCCceEEEEEEEeCCCC
Confidence            346789999999997 79999999998732221  11    123455667889999999999888   599999999987


Q ss_pred             c
Q psy10163        420 P  420 (615)
Q Consensus       420 p  420 (615)
                      .
T Consensus        92 ~   92 (111)
T d1biha2          92 E   92 (111)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.1e-05  Score=62.63  Aligned_cols=69  Identities=26%  Similarity=0.428  Sum_probs=54.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeec-CCCCceEEecCC---eEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~-~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .+.+.+|+.++|.|.+ +.|.|.+.|.++...+. ....++.+..++   .|.|.++...|+|.|.|.|.|..+
T Consensus         9 ~~~v~~G~~v~l~C~v-~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~   81 (90)
T d1x44a1           9 DTTAYCGERVELECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQS   81 (90)
T ss_dssp             CEEEETTEEEEEEEEC-SSSSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETTEEE
T ss_pred             CEEEeCCCcEEEEEEE-CCCCceEEEEEeecccCCCCCccEEEEEeCCccEEEECccccccCEEEEEEEecceE
Confidence            4567899999999998 57999999988655554 344556655544   799999999999999999988644

>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of trkB receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=4.2e-05  Score=63.57  Aligned_cols=75  Identities=19%  Similarity=0.256  Sum_probs=55.7

Q ss_pred             CCCeeeeeecccCCCCCeeeccCCceeecCCCCceEEe--------cCCeEEEeeccccCCceeeecCCCCCCcccccce
Q psy10163        354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--------LDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF  425 (615)
Q Consensus       354 eg~~~tl~C~~~G~P~P~i~w~k~~~~l~~~~g~~~~~--------~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~  425 (615)
                      .+....+.|.+.|+|.|.|.|.++...|... .++.+.        ....|.|..+...|+|.|.|.|.|..|. ....+
T Consensus        15 ~~~~~~i~~~v~G~P~P~i~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~   92 (103)
T d1wwbx_          15 SDHHWCIPFTVKGNPKPALQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQI   92 (103)
T ss_dssp             CCCEEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEE
T ss_pred             cceeEEEEEEEEEeCCCEEEEEECCEEeeee-eeeeeeecccccccceEEEEECCCCHHhCceEEEEEeccCCE-EEEEE
Confidence            4556678899999999999998876666532 222211        1236999999999999999999999998 56666


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .+.|.
T Consensus        93 ~v~V~   97 (103)
T d1wwbx_          93 SAHFM   97 (103)
T ss_dssp             EECCS
T ss_pred             EEEEE
Confidence            65553

>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=97.52  E-value=3.5e-05  Score=61.56  Aligned_cols=62  Identities=21%  Similarity=0.112  Sum_probs=48.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeecc-CCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWS-KGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~-k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      ...+.+|+.++|.|.+.|.|.|.+.|. ++..        .+.....+|.|.++...|+|.|.|.+.+...
T Consensus        14 ~~~v~~G~~vtL~C~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~~s~~   76 (84)
T d1fnla1          14 WYSVLEKDSVTLKCQGAYSPEDNSTQWFHNES--------LISSQASSYFIDAATVNDSGEYRCQTNLSTL   76 (84)
T ss_dssp             CSEEETTCCEEEEEECCCBTTBCCCEEEETTE--------EEESSCSEEEESSCCGGGCEEEEEECSSSCC
T ss_pred             CcEEeCCCeEEEEEEeccCCCCeEEEEeeece--------eeeecceeeEecCCcccCCEEEEEEccCCCc
Confidence            356779999999999999999976664 4332        2334456789999999999999999987644

>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=2.2e-05  Score=65.55  Aligned_cols=69  Identities=16%  Similarity=0.156  Sum_probs=55.8

Q ss_pred             ccccCCCeeeeee------cccCCCCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRC------IAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C------~~~G~P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ..+..|+...|.|      .+.++|.|.|.|.++...+.. .++.....++.|.|.++...|+|.|.|.|.|..|.
T Consensus         9 q~~~~g~~~~l~Cp~~~~~~~~~~p~P~i~W~kdg~~l~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~g   83 (103)
T d1iray2           9 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLG   83 (103)
T ss_dssp             EEEESSSCEEEECTTGGGGCBTTTBCCCCEEEETTEECCC-CSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETT
T ss_pred             EEEecCCCEEEEcCCccccccCCCCCCEEEEEECCccccC-CCcEEEecCCEEEEcccccccCcEEEEEEEECcCC
Confidence            3566788899999      467999999999987766654 34455566789999999999999999999987653

>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Kin of IRRE-like protein 3, KIRREL3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=1.5e-05  Score=67.21  Aligned_cols=82  Identities=26%  Similarity=0.423  Sum_probs=60.4

Q ss_pred             ccccCCCeeeeeecccCC-CCCeeeccCCceeecC-CCCceEEecC-------CeEEEeeccccC-CceeeecCCCCCCc
Q psy10163        350 VEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDG-SDGHYKLTLD-------GVLQIVGLVRQD-AGIYVCVAANGIGD  419 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~-~~g~~~~~~~-------gsl~I~~~~~~D-sG~Y~C~a~n~~G~  419 (615)
                      +.+.+|+.+.|.|.+.+. |.+.+.|.++...+.. ...++.+...       ..|.|.++...| +|.|.|.|.|..|.
T Consensus        16 ~~~~~G~~~~l~C~v~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~D~~G~Y~C~A~N~~G~   95 (115)
T d2crya1          16 QHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGS   95 (115)
T ss_dssp             CCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCE
T ss_pred             EEEecCCEEEEEEEeecCCCeeEEEEeeeeeeEeeeeeeeEeeeeeccccCcEEEEEEeccchhcCCeEEEEEEEECCCe
Confidence            456789999999999995 5668999875555532 3344443221       258888999998 69999999999998


Q ss_pred             ccccceeeeeccc
Q psy10163        420 PIRKEFNVIVRGN  432 (615)
Q Consensus       420 p~~~~~~l~V~~~  432 (615)
                       ....+.|.|.+.
T Consensus        96 -~~~~~~L~V~~~  107 (115)
T d2crya1          96 -DTEIIRLKEQGS  107 (115)
T ss_dssp             -EEEEECCCCSCS
T ss_pred             -EEEEEEEEEECC
Confidence             677777877653

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=5.5e-05  Score=61.10  Aligned_cols=76  Identities=18%  Similarity=0.160  Sum_probs=57.3

Q ss_pred             ccccCCCeeeeeecccCC-CCCeeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGY-PIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~-P~P~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.+. |.+.+.|.|+...+...      .....|.|..+...|+|.|.|.|.|..+......+.+.
T Consensus        10 ~~V~eG~~v~L~C~~~~~~~~~~~~w~k~g~~~~~~------~~~~~l~i~~~~~~dsG~Y~C~a~n~~~~~~S~~v~i~   83 (89)
T d1f2qa2          10 EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNIT   83 (89)
T ss_dssp             SEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             CeEeCCCEEEEEEEecCCCCCeEEEEEEeeeccccc------cccceEEEeeeeeecCcEEEEEEEeCCCCeEeeeEEEE
Confidence            346789999999999766 45588898765544321      23356889999999999999999998887556667777


Q ss_pred             ecc
Q psy10163        429 VRG  431 (615)
Q Consensus       429 V~~  431 (615)
                      |..
T Consensus        84 V~~   86 (89)
T d1f2qa2          84 VIK   86 (89)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            754

>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00012  Score=57.96  Aligned_cols=69  Identities=20%  Similarity=0.135  Sum_probs=47.8

Q ss_pred             ccccCCCeeeeeecccCCCCCeeec-cCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTW-SKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVI  428 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w-~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l~  428 (615)
                      ..+.+|+.++|.|.+.++|.|.+.| .++...+        ......|.|..+...|+|.|.|.+.+....   ..+.|.
T Consensus        11 ~~v~~G~~v~L~C~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~i~~v~~~d~G~Y~C~a~~s~~S---~~v~l~   79 (82)
T d1f2qa1          11 NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLS--------EETNSSLNIVNAKFEDSGEYKCQHQQVNES---EPVYLE   79 (82)
T ss_dssp             SEEETTCCEEEECCTTCC----CCEEEETTEEC--------SCCSSEEEECSCCGGGCEEEEEECTTSSCC---CCEEEE
T ss_pred             eEEeCCCeEEEEEEEeeeeeecceeeeeeeeee--------ecccceeEECCCChhhCCcEEEEecCCCCc---ccEEEE
Confidence            4577999999999999999997666 3433333        234567999999999999999999886443   344454


Q ss_pred             e
Q psy10163        429 V  429 (615)
Q Consensus       429 V  429 (615)
                      |
T Consensus        80 V   80 (82)
T d1f2qa1          80 V   80 (82)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=97.18  E-value=0.00015  Score=57.80  Aligned_cols=63  Identities=19%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             cccccCCCeeeeeecccCCCCCe-eeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPV-YTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~-i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      ...+.+|+.++|.|.+.++|.|. +.|.++...+.        .....|.|..+...|+|.|.|.+.|..+.
T Consensus        13 ~~~v~~G~~v~L~C~~~~~~~~~~~~w~~~g~~~~--------~~~~~l~i~~v~~~dsG~Y~C~a~ns~~S   76 (85)
T d2fcba1          13 WINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIP--------THTQPSYRFKANNNDSGEYTCQTGQTSLS   76 (85)
T ss_dssp             CSEEETTCEEEEEEECSSCCCTTCCEEEETTEECT--------TCCSSEEEEECCGGGCEEEEEECTTSBCC
T ss_pred             CeEEcCCCeEEEEEEEeeccceeEEEeeccccccc--------ccccceEEeeccccCCcEEEEECCCCccc
Confidence            34677999999999999999885 55565544443        23457889999999999999999887543

>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2-binding domain of CD58, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00038  Score=55.94  Aligned_cols=70  Identities=20%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCceeec---C--------CCCceEE-ecCCeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID---G--------SDGHYKL-TLDGVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~l~---~--------~~g~~~~-~~~gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      ++.+..|+.++|.|.+ ..|.+.|.|.++...+.   .        -..+..+ ..+++|+|.++...|+|.|.|.+.+.
T Consensus         4 ~v~~~~G~sVtl~c~~-~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~l~~~DsG~Y~c~~~n~   82 (93)
T d1ccza1           4 QIYGVVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI   82 (93)
T ss_dssp             EEEEETTCCEEECCCC-SSCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred             EEEEEECCCEEEEecC-CCCCcEEEEEEeccccceeeecceeeCCCccceEEEcCCeeEEEEEecChhhCEEEEEEEECC
Confidence            3567789999999975 57999999987433321   0        1122222 23568999999999999999999887


Q ss_pred             CCc
Q psy10163        417 IGD  419 (615)
Q Consensus       417 ~G~  419 (615)
                      .+.
T Consensus        83 ~~t   85 (93)
T d1ccza1          83 TDT   85 (93)
T ss_dssp             CSC
T ss_pred             CcE
Confidence            664

>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2 (ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-2 (ICAM-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00017  Score=60.13  Aligned_cols=82  Identities=9%  Similarity=0.013  Sum_probs=49.2

Q ss_pred             cccCCCeeeeeecccC-C--CCCeeeccCCceeecCCC-CceEEecCC---eEEEeeccccCCceeeecCCCCCCccccc
Q psy10163        351 EAEEGNFVTLRCIAIG-Y--PIPVYTWSKGEVSIDGSD-GHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIGDPIRK  423 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G-~--P~P~i~w~k~~~~l~~~~-g~~~~~~~g---sl~I~~~~~~DsG~Y~C~a~n~~G~p~~~  423 (615)
                      .+.+|+.++|.|.+.| .  |.+.|+|.++...+.... .........   .|.|......|.|.|+|.|.|+.+. ...
T Consensus        13 ~v~~G~~v~l~C~v~g~~p~p~~~i~W~~~~~~i~~~~~~~~~~~~~~~~s~l~~~~~~~d~g~~ytC~A~n~~~~-~~~   91 (106)
T d1zxqa1          13 LVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMS-RGG   91 (106)
T ss_dssp             EECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEEEECGG-GTC
T ss_pred             EEeCCCEEEEEEEEeCcccCCCceEEEEcCCEEeeecccceEeecccceeEEEEEeeehhcCCcEEEEEEEecCCC-CCC
Confidence            4568999999999987 4  455899988655553211 111001111   2444444555666899999999875 334


Q ss_pred             ceeeeecccc
Q psy10163        424 EFNVIVRGNY  433 (615)
Q Consensus       424 ~~~l~V~~~~  433 (615)
                      ++.+.+..+.
T Consensus        92 ~~~~~~s~p~  101 (106)
T d1zxqa1          92 NIFHKHSAPK  101 (106)
T ss_dssp             CEEEEECCCE
T ss_pred             eeEecccCCc
Confidence            4444554443

>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-1 (ICAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00029  Score=58.34  Aligned_cols=79  Identities=14%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             cccCCCeeeeeecccC-CCCC--eeeccCCceeecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCCcccccceee
Q psy10163        351 EAEEGNFVTLRCIAIG-YPIP--VYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNV  427 (615)
Q Consensus       351 ~~~eg~~~tl~C~~~G-~P~P--~i~w~k~~~~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G~p~~~~~~l  427 (615)
                      .+.+|+.++|.|.+.| .|.|  .|+|.++...+..... ........|.|......|.|.|+|.|.|..|. ...++.+
T Consensus        15 ~v~~G~~~~L~C~v~g~~P~p~~~v~W~~~~~~l~~~~~-~~~~~~s~l~i~~~~~dd~g~ytC~A~n~~g~-~~~~~~~   92 (103)
T d1iama1          15 WQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA-VGEPAEVTTTVLVRRDHHGAQFSCRTELDLRP-QGLELFE   92 (103)
T ss_dssp             EECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC-CTTTEEEEEEEECCSSCSSCEEEEEEEEECGG-GTSCEEE
T ss_pred             eEeCCCEEEEEEEecCCCCCCceEEEEcccccccccccc-ccccceEEEEEeeehhHCCCEEEEEEEeCCCC-ccCeEee
Confidence            3568999999999986 6766  4678776655532110 00111235777777788888999999999886 4445555


Q ss_pred             eecc
Q psy10163        428 IVRG  431 (615)
Q Consensus       428 ~V~~  431 (615)
                      .+.+
T Consensus        93 ~~s~   96 (103)
T d1iama1          93 NTSA   96 (103)
T ss_dssp             EECC
T ss_pred             eEcC
Confidence            5544

>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2, first domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.69  E-value=0.00066  Score=55.55  Aligned_cols=81  Identities=22%  Similarity=0.390  Sum_probs=57.1

Q ss_pred             cccccCCCeeeeeecccC--CCCCeeeccCCceee---cC------CCCceEEecCCeEEEeeccccCCceeeecCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIG--YPIPVYTWSKGEVSI---DG------SDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGI  417 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G--~P~P~i~w~k~~~~l---~~------~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~  417 (615)
                      .|.+..|+.++|.|....  .....|.|.++...+   ..      ..++..+..+++|+|.++...|+|.|.|.+.+..
T Consensus         4 tV~G~~G~sV~L~~~~~~~~~~i~~I~W~~~~~~i~~~~~~~~~~~~~~~~~~~~ngSL~I~nl~~~DsG~Y~c~v~~~~   83 (98)
T d1hnga1           4 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN   83 (98)
T ss_dssp             EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred             EEEEecCCCEEEECCCCCCccchheeeeeccccceeEEccCCccccCCCeEEECCCccEEEeCCCHHHCEEEEEEEEeCC
Confidence            356778999999996433  334579997644333   11      2346677788999999999999999999988777


Q ss_pred             Ccc-cccceeeee
Q psy10163        418 GDP-IRKEFNVIV  429 (615)
Q Consensus       418 G~p-~~~~~~l~V  429 (615)
                      |.. ..+.+.|.|
T Consensus        84 g~~~~~~~~~L~V   96 (98)
T d1hnga1          84 GTRILNKALDLRI   96 (98)
T ss_dssp             CCEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEE
Confidence            752 234444544

>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.0016  Score=54.09  Aligned_cols=67  Identities=21%  Similarity=0.304  Sum_probs=49.0

Q ss_pred             ccCCCeeeeeecccCCCCCeeeccCCce------ee--c--------CC--CCceEEecCCeEEEeeccccCCceeeecC
Q psy10163        352 AEEGNFVTLRCIAIGYPIPVYTWSKGEV------SI--D--------GS--DGHYKLTLDGVLQIVGLVRQDAGIYVCVA  413 (615)
Q Consensus       352 ~~eg~~~tl~C~~~G~P~P~i~w~k~~~------~l--~--------~~--~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a  413 (615)
                      +.+|+.++|.|.........+.|.|+..      +.  .        ..  .||..+..+++|.|.++...|+|.|+|..
T Consensus        11 v~~G~~V~L~c~~~p~~~~~~~W~k~~~~~~~~~i~~y~~~~~~~~~~~~y~gR~~l~~ngSL~I~~v~~~D~G~Y~c~v   90 (107)
T d1l6za1          11 VAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDM   90 (107)
T ss_dssp             CCTTCCEEEEEESCCTTCSEEEEEESSCCSGGGEEEEECSTTCCEECCSSCCSSEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred             ccCCCCEEEEecCCCCCceEEEEEeCcccCCceeeEEEEcCCCccccCCcceeEEEEcccccEEEcCCCchhCEEEEEEE
Confidence            4589999999985544466789965211      11  0        01  36788889999999999999999999997


Q ss_pred             CCCCC
Q psy10163        414 ANGIG  418 (615)
Q Consensus       414 ~n~~G  418 (615)
                      .+..+
T Consensus        91 ~~~~~   95 (107)
T d1l6za1          91 TDENY   95 (107)
T ss_dssp             EETTE
T ss_pred             EECCC
Confidence            65543

>d1tocr2 g.8.1.2 (R:57-119) Ornithodorin {Soft tick (Ornithodoros moubata) [TaxId: 6938]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Soft tick anticoagulant proteins
domain: Ornithodorin
species: Soft tick (Ornithodoros moubata) [TaxId: 6938]

Probab=95.50  E-value=0.015  Score=40.81  Aligned_cols=53  Identities=23%  Similarity=0.636  Sum_probs=41.9

Q ss_pred             CccccCcCCCCCCCCceEEEeCCCCceEEEEeccccCCCCCCCChHHHHHhccCC
Q psy10163        498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEF  552 (615)
Q Consensus       498 ~C~~~~~~g~C~~~~~rwyyd~~~~~C~~F~y~GC~Gn~N~F~s~~~C~~~C~~~  552 (615)
                      .|+-.+. ..|..-...-|||+.+.+|+-. -.||....|.|+++-+|...|+..
T Consensus         8 sc~g~pp-tsc~~g~~ityyds~s~tckvl-~~~cps~en~f~seiecqvacg~~   60 (63)
T d1tocr2           8 SCLGDPP-TSCAEGTDITYYDSDSKTCKVL-AASCPSGENTFESEVECQVACGAP   60 (63)
T ss_dssp             GGGSCCC-BCCTTCEEEEEEETTTTEEEEE-EEEBCSSSCCBSSHHHHHHHTTCC
T ss_pred             hhcCCCC-cccccCcceEEEcCCCchhhhh-hccCCCcccccccceeEEEeeccc
Confidence            3544332 2466555678999999999875 579999999999999999999974

>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Myelin oligodendrocyte glycoprotein (MOG)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.95  E-value=0.011  Score=49.47  Aligned_cols=82  Identities=18%  Similarity=0.180  Sum_probs=53.8

Q ss_pred             ccccCCCeeeeeecccCC---CCCeeeccCCc---e--ee-c------C----CCCceEEec------CCeEEEeecccc
Q psy10163        350 VEAEEGNFVTLRCIAIGY---PIPVYTWSKGE---V--SI-D------G----SDGHYKLTL------DGVLQIVGLVRQ  404 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~---P~P~i~w~k~~---~--~l-~------~----~~g~~~~~~------~gsl~I~~~~~~  404 (615)
                      |.+.+|+.++|.|.+...   ....|.|.+..   .  ++ .      .    -..+..+..      +.+|.|.++...
T Consensus        12 V~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~   91 (126)
T d1pkoa_          12 IRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFS   91 (126)
T ss_dssp             EEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGG
T ss_pred             EEEEcCCcEEEEEEEECcCCCCceEEEEeecCCcceEEEEEeccccccccccccceeEEEeeccccCCeEEEEEEEEchh
Confidence            677899999999986432   23458896521   1  11 0      0    012333332      237999999999


Q ss_pred             CCceeeecCCCCCCcccccceeeeeccc
Q psy10163        405 DAGIYVCVAANGIGDPIRKEFNVIVRGN  432 (615)
Q Consensus       405 DsG~Y~C~a~n~~G~p~~~~~~l~V~~~  432 (615)
                      |+|.|.|.+.++.+. ....+.|.|.++
T Consensus        92 D~G~Y~C~v~~~~~~-~~~~v~L~V~~P  118 (126)
T d1pkoa_          92 DEGGYTCFFRDHSYQ-EEAAVELKVEDP  118 (126)
T ss_dssp             GCEEEEEEEEETTEE-EEEEEEEEEECT
T ss_pred             HCeEEEEEEEECCCE-EEEEEEEEEeCC
Confidence            999999998887665 455567777654

>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD4 V-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.01  Score=47.70  Aligned_cols=67  Identities=19%  Similarity=0.339  Sum_probs=45.8

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCce--ee-cC-------C---CCceEEec------CCeEEEeeccccCCcee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV--SI-DG-------S---DGHYKLTL------DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~--~l-~~-------~---~g~~~~~~------~gsl~I~~~~~~DsG~Y  409 (615)
                      .|.+.+|+.++|.|.........|.|.+...  .+ ..       .   .+++.+..      +.+|.|.++...|+|.|
T Consensus         3 ~V~~~~G~svtL~C~~s~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~l~~~DsG~Y   82 (97)
T d2nxyb1           3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY   82 (97)
T ss_dssp             EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred             EEEEEcCCcEEEEEEEecCCCceEEEEEeCCceeeeecceeeeecCceeccceEEEeccCCCCEEEEEECCCChHHCEEE
Confidence            3567899999999998877777899954211  11 00       0   12222211      22699999999999999


Q ss_pred             eecCCC
Q psy10163        410 VCVAAN  415 (615)
Q Consensus       410 ~C~a~n  415 (615)
                      .|...+
T Consensus        83 ~C~v~~   88 (97)
T d2nxyb1          83 ICEVED   88 (97)
T ss_dssp             EEEETT
T ss_pred             EEEEec
Confidence            998765

>d1tocr2 g.8.1.2 (R:57-119) Ornithodorin {Soft tick (Ornithodoros moubata) [TaxId: 6938]}

class: Small proteins
fold: BPTI-like
superfamily: BPTI-like
family: Soft tick anticoagulant proteins
domain: Ornithodorin
species: Soft tick (Ornithodoros moubata) [TaxId: 6938]

Probab=92.97  E-value=0.09  Score=36.76  Aligned_cols=46  Identities=30%  Similarity=0.606  Sum_probs=39.2

Q ss_pred             CCCCCeeeeEeeCCCCceeeeeeCCCCCCCCCCCCHHHHHHhCCCCc
Q psy10163         56 DCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT  102 (615)
Q Consensus        56 ~C~~~~~rw~yd~~~~~C~~F~y~GC~Gn~N~F~t~~~C~~~C~~~~  102 (615)
                      .|..-...-|||+.++.|+-. -.||....|.|.++-+|+..|...+
T Consensus        16 sc~~g~~ityyds~s~tckvl-~~~cps~en~f~seiecqvacg~~~   61 (63)
T d1tocr2          16 SCAEGTDITYYDSDSKTCKVL-AASCPSGENTFESEVECQVACGAPI   61 (63)
T ss_dssp             CCTTCEEEEEEETTTTEEEEE-EEEBCSSSCCBSSHHHHHHHTTCCC
T ss_pred             ccccCcceEEEcCCCchhhhh-hccCCCcccccccceeEEEeecccc
Confidence            466666678999999999875 5699999999999999999998653

>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car), domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Coxsackie virus and adenovirus receptor (Car), domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.042  Score=45.16  Aligned_cols=71  Identities=24%  Similarity=0.382  Sum_probs=46.9

Q ss_pred             cccccCCCeeeeeecccCCCCC----eeeccC---C-----ceee--------cC----CCCceEEecC------CeEEE
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIP----VYTWSK---G-----EVSI--------DG----SDGHYKLTLD------GVLQI  398 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P----~i~w~k---~-----~~~l--------~~----~~g~~~~~~~------gsl~I  398 (615)
                      .+.+.+|+.++|.|...+.+.+    .|.|.+   +     ..++        ..    -.++..+..+      .+|.|
T Consensus        13 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I   92 (124)
T d1eaja_          13 MIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINV   92 (124)
T ss_dssp             EEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEE
T ss_pred             eEEEECCCcEEEeEEEecccCCCCcEEEEEEEeCCCCcceeEEEEEEeCCccccccCcccccceEEEccCCCCCEEEEEE
Confidence            4677899999999987654432    478853   1     0111        00    1244444322      37999


Q ss_pred             eeccccCCceeeecCCCCCCc
Q psy10163        399 VGLVRQDAGIYVCVAANGIGD  419 (615)
Q Consensus       399 ~~~~~~DsG~Y~C~a~n~~G~  419 (615)
                      .++...|+|.|.|...+..+.
T Consensus        93 ~~v~~~D~G~Y~C~v~~~~~~  113 (124)
T d1eaja_          93 TNLQLSDIGTYQCKVKKAPGV  113 (124)
T ss_dssp             CSCCGGGCEEEEEEEEETTEE
T ss_pred             cccEEccCEEEEEEEEECCCe
Confidence            999999999999998776554

>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=90.94  E-value=0.12  Score=42.66  Aligned_cols=67  Identities=22%  Similarity=0.274  Sum_probs=46.5

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEec-----CCeEEEeeccccCCcee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTL-----DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~-----~gsl~I~~~~~~DsG~Y  409 (615)
                      ..+.+.+|+.++|.|.......+.|.|-+      ...++..       ...++....     .-.|+|.++.+.|+|.|
T Consensus         9 ~~v~v~~G~~vtL~C~~~~~~~~~i~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsg~Y   88 (115)
T d1lp9e1           9 GLVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALY   88 (115)
T ss_dssp             SEEEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEE
T ss_pred             CeEEECCCCCEEEEEEEeCCCcCCeeEEEeCCCCceeeeeeeeeccCCcceeeeeeeccCCCCeEEeeccccccccCccc
Confidence            45678899999999998877788899943      1222211       123343332     22599999999999999


Q ss_pred             eecCC
Q psy10163        410 VCVAA  414 (615)
Q Consensus       410 ~C~a~  414 (615)
                      .|...
T Consensus        89 yCa~~   93 (115)
T d1lp9e1          89 YCALF   93 (115)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            99743

>d1ospl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=90.72  E-value=0.47  Score=38.38  Aligned_cols=66  Identities=20%  Similarity=0.280  Sum_probs=45.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.....-...|.|-+      ...++.       ....++.....   ..|.|.++.+.|++.|.|.
T Consensus        10 ~ltv~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~i~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~Dsa~YyCa   89 (107)
T d1ospl1          10 SFSVSLGDRVTITCKASEDIYSRLAWYQQKPGNAPRLLISGATSLETWVPSRFSGSDSGKDYTLSITSLQTEDVATYFCQ   89 (107)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEECSSSSEEEEESSCCGGGCSEEEEE
T ss_pred             EEEECCCCCEEEEEecCCCcccccEEEEcCCCccceeEEeeccccCCccccccceecCCCeEEeEEcccccccCCcEEEe
Confidence            4677899999999987766666789943      122221       12244544433   2699999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        90 ~~   91 (107)
T d1ospl1          90 QY   91 (107)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>d1jhll_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=90.69  E-value=0.36  Score=39.25  Aligned_cols=67  Identities=22%  Similarity=0.373  Sum_probs=45.4

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+      ...++..       ....+....++   +|+|.++.+.|++.|.|-
T Consensus        10 ~l~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~l~~~Dsa~YyCA   89 (108)
T d1jhll_          10 YLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQ   89 (108)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEE
T ss_pred             eEEecCCCCEEEEEEccCCcCCceEEEEccccCCCeEEEEeeccccCCccccccccCCCCEEEeEeeeeEeccceEEEEe
Confidence            3567889999999988776677788832      1222211       12233333333   699999999999999996


Q ss_pred             CCC
Q psy10163        413 AAN  415 (615)
Q Consensus       413 a~n  415 (615)
                      +..
T Consensus        90 ~~~   92 (108)
T d1jhll_          90 QHN   92 (108)
T ss_dssp             ECS
T ss_pred             eCC
Confidence            443

>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.05  E-value=0.13  Score=42.89  Aligned_cols=66  Identities=21%  Similarity=0.364  Sum_probs=43.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---Cc------eee-cCC---C----------CceEEe-c-C--CeEEEeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---GE------VSI-DGS---D----------GHYKLT-L-D--GVLQIVGL  401 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~~------~~l-~~~---~----------g~~~~~-~-~--gsl~I~~~  401 (615)
                      .+.+.+|+.++|.|.+.+...+.|.|-+   +.      .++ ...   .          .++... . +  -.|+|.++
T Consensus        10 ~~~~~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~L~I~~~   89 (122)
T d1nezg_          10 KMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNKF   89 (122)
T ss_dssp             CEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETTTEEEEEESSC
T ss_pred             EEEECCCCCEEEEEEEcCccCCCEEEEEECCCCCcCceEEEEeeeccccceeeccCCCCCcEEEEECCCCCEeEEEEccc
Confidence            3567789999999999888888899943   11      111 110   0          122111 1 1  15999999


Q ss_pred             cccCCceeeecCC
Q psy10163        402 VRQDAGIYVCVAA  414 (615)
Q Consensus       402 ~~~DsG~Y~C~a~  414 (615)
                      ...|+|.|.|.+.
T Consensus        90 ~~~Dsg~YyCa~~  102 (122)
T d1nezg_          90 SKENEGYYFCSVI  102 (122)
T ss_dssp             CGGGCEEEEEEEE
T ss_pred             ccCCCEEEEeeEe
Confidence            9999999999753

>d1kcvl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=90.04  E-value=0.44  Score=38.41  Aligned_cols=67  Identities=22%  Similarity=0.289  Sum_probs=45.5

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEe---cCCeEEEeeccccCCceeee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLT---LDGVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~---~~gsl~I~~~~~~DsG~Y~C  411 (615)
                      ..+.+.+|+.++|.|.........|.|-+      ...++..       ...++...   ....|.|.++...|++.|.|
T Consensus         9 ~~l~v~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~DSa~YyC   88 (107)
T d1kcvl1           9 KSMGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQADDDADYYC   88 (107)
T ss_dssp             SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred             CEEeECCCCCEEEEEEecCCcCCceEEEEcccCCCCEEEEEecccccCCccceEEeeccCCeeecEEHhheecCCceEEE
Confidence            34678899999999988777777899943      2222211       11233222   12369999999999999999


Q ss_pred             cCC
Q psy10163        412 VAA  414 (615)
Q Consensus       412 ~a~  414 (615)
                      -+.
T Consensus        89 a~~   91 (107)
T d1kcvl1          89 GQS   91 (107)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            754

>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa variable domain, VL-kappa {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.00  E-value=0.3  Score=39.42  Aligned_cols=66  Identities=21%  Similarity=0.373  Sum_probs=46.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|...+.-...|.|-+      ...++.       ....++....++   .|.|.++.+.|++.|.|.
T Consensus         9 s~~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Dsa~YyCa   88 (106)
T d1lk3l1           9 ALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ   88 (106)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEECCCCCEEEEEEeCCCCCccEEEEecCCCCCcEEEEEecccccCCcCCceeeecCCCEEEeEECCcChhhCCCcccc
Confidence            3677899999999998876677899932      233331       112344433332   699999999999999996


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        89 ~~   90 (106)
T d1lk3l1          89 QS   90 (106)
T ss_dssp             EC
T ss_pred             cc
Confidence            44

>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme) {Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Novel antigen receptor (against lysozyme)
species: Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]

Probab=89.88  E-value=0.29  Score=40.13  Aligned_cols=68  Identities=25%  Similarity=0.430  Sum_probs=46.0

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccC-----CceeecCCCCceEEecC-----CeEEEeeccccCCceeeecCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSK-----GEVSIDGSDGHYKLTLD-----GVLQIVGLVRQDAGIYVCVAANG  416 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k-----~~~~l~~~~g~~~~~~~-----gsl~I~~~~~~DsG~Y~C~a~n~  416 (615)
                      .+.+.+|+.++|.|...+.  ....|.|-+     ...++....+++....+     -+|+|.++.+.|++.|.|.+...
T Consensus         8 s~t~~~G~svtl~C~~s~~s~~~~~i~WYrq~~g~~~~~~~~~~gr~~~~~~~~~~~~~L~I~~l~~~Dsa~YyCA~~~~   87 (112)
T d1sq2n_           8 SVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGVA   87 (112)
T ss_dssp             EEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECBT
T ss_pred             EEEEcCCCCEEEEEEECCCcccCCceEEEEeeccceeeeeeccCCcEeeEEecCCceeeeEecCCcCccCEEEeEEEecC
Confidence            3567789999999977543  356789943     11122234455543322     26999999999999999976544

>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=89.79  E-value=0.55  Score=37.95  Aligned_cols=66  Identities=18%  Similarity=0.199  Sum_probs=44.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.....-...|.|-+      ...++..       ...++.....   ..|.|.++.+.|++.|.|.
T Consensus        10 ~l~~~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~DsA~YyCa   89 (107)
T d1mexl1          10 FMSTSLGNRVSVTCKASQNVGTNVAWFQQKPGQSPKTLIYSASYRYSGVPDRFTGSGSGTDFTLTINNVQSEDLAEYFCQ   89 (107)
T ss_dssp             EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred             eEEECCCCCEEEEEEeCCCCCCceEEEeccCCcccEEEEEeccccccccCCCeeecCCCCeeeeeechhheecceeEEEe
Confidence            4667899999999987666666789943      2222211       1234443322   3699999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        90 ~~   91 (107)
T d1mexl1          90 QY   91 (107)
T ss_dssp             EC
T ss_pred             EC
Confidence            44

>d1j1pl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=89.73  E-value=0.5  Score=38.08  Aligned_cols=67  Identities=25%  Similarity=0.357  Sum_probs=45.2

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecC---CeEEEeeccccCCceeee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C  411 (615)
                      ..+.+.+|+.++|.|.....-...|.|-+      ...++.       ....++....+   ..|+|.++...|++.|.|
T Consensus         9 ~~l~v~~G~~vtL~C~~~~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~~~~~Dsa~YyC   88 (107)
T d1j1pl_           9 ATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC   88 (107)
T ss_dssp             SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred             CeEEECCCCCEEEEEEecCCCCcceEEEEeCCCCccEEeeecccCCCceeCCcceecccCCEEEEEEcccCcCCCEEEEE
Confidence            34678899999999987666667788943      122221       11234433322   279999999999999999


Q ss_pred             cCC
Q psy10163        412 VAA  414 (615)
Q Consensus       412 ~a~  414 (615)
                      ...
T Consensus        89 a~~   91 (107)
T d1j1pl_          89 QQA   91 (107)
T ss_dssp             EEC
T ss_pred             EcC
Confidence            644

>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Engineered (including hybrid species)

Probab=89.66  E-value=0.54  Score=37.95  Aligned_cols=67  Identities=21%  Similarity=0.316  Sum_probs=44.8

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecC---CeEEEeeccccCCceeee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C  411 (615)
                      ..+.+.+|+.++|.|.....-.+.|.|-+      ...++-       ....++.....   -+|+|.++.+.|++.|.|
T Consensus         9 ~sl~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~DsA~YyC   88 (107)
T d1tjgl1           9 SSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYC   88 (107)
T ss_dssp             SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred             CEEEECCCCCEEEEEEECCCCCccEEEEeccCCccceEEEeecccccCCCCcceEEeccCCEEEEEeccceeCcCceEEE
Confidence            34667889999999987765567888833      222221       11123333322   269999999999999999


Q ss_pred             cCC
Q psy10163        412 VAA  414 (615)
Q Consensus       412 ~a~  414 (615)
                      .+.
T Consensus        89 a~~   91 (107)
T d1tjgl1          89 QQL   91 (107)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            644

>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=89.59  E-value=0.48  Score=38.42  Aligned_cols=67  Identities=22%  Similarity=0.303  Sum_probs=45.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC----C--ceeecC-------CCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK----G--EVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k----~--~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+    .  ..++..       ...++....   +.+|.|.++.+.|++.|.|.
T Consensus        10 s~~~~~G~svtl~C~~s~~~~~~~~Wyrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~YyCa   89 (107)
T d1c5cl1          10 SLSASLGERVSLTCRTSQEISGYLSWLQQKPDGTIKRLIYDATKLDSGAPKRFSGSRSGSDYSLTISSLESEDFADYYCL   89 (107)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred             EEEECCCCCEEEEEEeCCCCCCCEEEEEcCCCCcceeEEeccccccCCCCCceEecccCCEEEEEEhhhcccCCeEEEEe
Confidence            4567789999999988877777788943    1  122211       112333222   23799999999999999997


Q ss_pred             CCC
Q psy10163        413 AAN  415 (615)
Q Consensus       413 a~n  415 (615)
                      +..
T Consensus        90 ~~~   92 (107)
T d1c5cl1          90 QYA   92 (107)
T ss_dssp             ECS
T ss_pred             cCc
Confidence            543

>d1a0ql1 b.1.1.1 (L:2-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=89.40  E-value=0.29  Score=39.59  Aligned_cols=67  Identities=22%  Similarity=0.354  Sum_probs=45.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC----C--ceeec-------CCCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK----G--EVSID-------GSDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k----~--~~~l~-------~~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+    .  ..++.       ....++.....+   +|.|.++.+.|++.|.|.
T Consensus         9 ~l~~~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~I~~~~~~DsA~YyCa   88 (106)
T d1a0ql1           9 SLSASLGGKVTITCKASQDIKKYIGWYQHKPGKQPRLLIHYTSTLLPGIPSRFRGSGSGRDYSFSISNLEPEDIATYYCL   88 (106)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCSEEEEE
T ss_pred             EEEECCCCCEEEEEEcCCCCCCCeEEEECCCCCcEEEEEEccccccCCCCcceEeecCCCEeeeEehhhcccCCEeEEEE
Confidence            4567899999999987766666799943    1  11121       111234333222   699999999999999997


Q ss_pred             CCC
Q psy10163        413 AAN  415 (615)
Q Consensus       413 a~n  415 (615)
                      +..
T Consensus        89 ~~~   91 (106)
T d1a0ql1          89 QYY   91 (106)
T ss_dssp             ECS
T ss_pred             EeC
Confidence            643

>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=88.74  E-value=0.28  Score=40.03  Aligned_cols=67  Identities=30%  Similarity=0.449  Sum_probs=46.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceee--cCC-----CCceEEecC-----CeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSI--DGS-----DGHYKLTLD-----GVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l--~~~-----~g~~~~~~~-----gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.....+...|.|-+      ...++  ...     .+++.....     .+|+|..+...|+|.|.
T Consensus         9 ~~~~~~G~~vtL~C~~~~~~~~~~~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~sL~i~~~~~~Dsg~Y~   88 (114)
T d2cdea1           9 SLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYI   88 (114)
T ss_dssp             EEEEETTCCCEEEEEECCSCCSEEEEEEECTTSCCCEEEEECSSCSCEEETTEEECBCSSSSEEEEEECSCCGGGCSEEE
T ss_pred             EEEEeCCCCEEEEEEEcCCCccCceEEEecCCCceEEeeeeeeeecccccCccceeecCcccccccEEcccChhhCcccc
Confidence            4667899999999998777778899943      12222  111     123333222     26999999999999999


Q ss_pred             ecCCC
Q psy10163        411 CVAAN  415 (615)
Q Consensus       411 C~a~n  415 (615)
                      |.+..
T Consensus        89 Ca~~~   93 (114)
T d2cdea1          89 CVVSD   93 (114)
T ss_dssp             EEEEC
T ss_pred             eeeec
Confidence            98654

>d1i8ka_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=88.68  E-value=0.47  Score=38.31  Aligned_cols=67  Identities=21%  Similarity=0.362  Sum_probs=44.6

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.....-...|.|-+      ...++.       ....++.....   .+|.|.++...|++.|.|.
T Consensus        10 slsv~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~Dsa~YyCa   89 (106)
T d1i8ka_          10 SLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCL   89 (106)
T ss_dssp             EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEECCCCCEEEEEEeCCCCCccEEEEeCCCCCceEEEEeccCccccCCCcceeEeCCCCeeeecccCCccccCEEEeEe
Confidence            3567789999999987666666788932      122221       12234433222   2699999999999999997


Q ss_pred             CCC
Q psy10163        413 AAN  415 (615)
Q Consensus       413 a~n  415 (615)
                      +..
T Consensus        90 ~~~   92 (106)
T d1i8ka_          90 QSF   92 (106)
T ss_dssp             ECS
T ss_pred             cCc
Confidence            543

>d1d5il1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=88.54  E-value=0.49  Score=38.20  Aligned_cols=66  Identities=26%  Similarity=0.340  Sum_probs=45.3

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec-------CCCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-------GSDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-------~~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+      ...++.       ....++.....   .+|.|.++.+.|++.|.|.
T Consensus        10 sl~~~~G~svtl~C~~s~~~~~~~~WYrq~pg~~~~~l~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~Dsa~YyCa   89 (107)
T d1d5il1          10 SMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCL   89 (107)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEECCCCCEEEEEEcCCCCCCccceeEeccccCeEEEEEeccccccCcCCceeecccCCEEEccccccCCcCCEEEEee
Confidence            4567899999999987776677788932      222221       11234443322   3799999999999999996


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        90 ~~   91 (107)
T d1d5il1          90 QY   91 (107)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>d1bwwa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=88.39  E-value=0.72  Score=37.19  Aligned_cols=66  Identities=23%  Similarity=0.352  Sum_probs=45.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|...+.-...|.|-+      .+.++..       ...++.....+   .|.|.++.+.|++.|.|.
T Consensus        12 ~l~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~p~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~l~~~Dsa~YyCA   91 (109)
T d1bwwa_          12 SLSASVGDRVTITCQASQDIIKYLNWYQQKPGKAPKLLIYEASNLQAGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQ   91 (109)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEECCCCCEEEEEEecCCCCCcceEeeeccCCCCEEEEEecccCCCCCCCCEEeeCCCCEeEEEEeeceeCcCceEEEe
Confidence            4678899999999988766566788833      2333311       12344333222   689999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        92 ~~   93 (109)
T d1bwwa_          92 QY   93 (109)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Novel antigen receptor 12Y-2
species: Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]

Probab=88.29  E-value=0.38  Score=39.27  Aligned_cols=67  Identities=25%  Similarity=0.381  Sum_probs=44.8

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccC-----CceeecCCCCceEEecC-----CeEEEeeccccCCceeeecCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSK-----GEVSIDGSDGHYKLTLD-----GVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k-----~~~~l~~~~g~~~~~~~-----gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      .+...+|+.++|.|.+.+.  ....|.|-+     ...++-...+++....+     -.|+|.++...|++.|.|.+..
T Consensus         9 s~~~~~G~svtL~C~~s~~~~~~~~~~Wyrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~YyCa~~~   87 (113)
T d1vesa_           9 TATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFY   87 (113)
T ss_dssp             EEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred             EEEEcCCCCEEEEEEECCCcccCCccceeeeeccccceeeeeecccccceeECCCCceeeeecccccCCcceEeeeeec
Confidence            4567799999999987644  345688943     11122223455544322     1689999999999999998643

>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Myelin membrane adhesion molecule P0
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.75  E-value=0.46  Score=38.40  Aligned_cols=69  Identities=23%  Similarity=0.306  Sum_probs=43.8

Q ss_pred             CcccccCCCeeeeeeccc----CCCCCeeeccCC------ce-eec--------CC----CCceEEec-----CCeEEEe
Q psy10163        348 PTVEAEEGNFVTLRCIAI----GYPIPVYTWSKG------EV-SID--------GS----DGHYKLTL-----DGVLQIV  399 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~----G~P~P~i~w~k~------~~-~l~--------~~----~g~~~~~~-----~gsl~I~  399 (615)
                      ..+.+..|+.++|.|...    ......|.|.+.      .. ++.        ..    .+|..+..     +.+|.|.
T Consensus         7 ~~v~a~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~   86 (119)
T d1neua_           7 REVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIH   86 (119)
T ss_dssp             SEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEEC
T ss_pred             CeEEEeeCCCEEEEEEEEecCCCCccEEEEEEEecccCCceeEEEEEeecccccccCccceeEEEEEEECCCCEEEEEEC
Confidence            456788999999999743    123347889541      11 110        00    13444332     2479999


Q ss_pred             eccccCCceeeecCCCC
Q psy10163        400 GLVRQDAGIYVCVAANG  416 (615)
Q Consensus       400 ~~~~~DsG~Y~C~a~n~  416 (615)
                      ++...|+|.|.|...+.
T Consensus        87 ~v~~~DsG~Y~C~v~~~  103 (119)
T d1neua_          87 NLDYSDNGTFTCDVKNP  103 (119)
T ss_dssp             SCCGGGCEEEEEEEEC-
T ss_pred             CCChHHCEEEEEEEEEC
Confidence            99999999999976553

>d1mqkl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=87.72  E-value=0.51  Score=38.32  Aligned_cols=66  Identities=21%  Similarity=0.319  Sum_probs=45.0

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+      ...++..       ...++.....   ..|.|.++.+.|++.|.|.
T Consensus        10 ~l~~~~G~svtL~C~~s~~~~~~i~WYrQ~pg~~p~~li~~~~~~~~~~~~~fs~~~~~~~~~L~I~~~~~~DSa~YyCA   89 (109)
T d1mqkl_          10 SLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQ   89 (109)
T ss_dssp             EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             EEEECCCCCEEEEEEeCCCcCcccceeeccccCCCeEEEEeeccccCCcCCCEEEeccCCEEEEEEccccccCCeeEEEe
Confidence            4567789999999987766667799943      2333311       1233332222   2699999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        90 ~~   91 (109)
T d1mqkl_          90 HH   91 (109)
T ss_dssp             EC
T ss_pred             ee
Confidence            54

>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD80, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.67  E-value=0.24  Score=39.62  Aligned_cols=67  Identities=21%  Similarity=0.250  Sum_probs=42.9

Q ss_pred             cccccCCCeeeeeecccCCCC----CeeeccCCceee-cCC----------CCceEEecC--CeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPI----PVYTWSKGEVSI-DGS----------DGHYKLTLD--GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~----P~i~w~k~~~~l-~~~----------~g~~~~~~~--gsl~I~~~~~~DsG~Y~C  411 (615)
                      .|.+..|+.++|.|.......    -.+.|.+.+..+ ...          .++..+...  .+|.|.++...|+|.|.|
T Consensus         3 ~Vt~~~G~~a~L~C~~~~~~~~~~~~~v~w~~~~~~v~~~~~~~~~~~~~~~~r~~~~~~g~~sL~I~~v~~~D~G~Y~C   82 (105)
T d1dr9a1           3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC   82 (105)
T ss_dssp             EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred             EEEEEeCCCEEEEEEECCcccceeEEEEEEEecceEEEEEEeccceeecceeeeeeeccCCcEEEEECcCChHHCeEEEE
Confidence            356778999999997543221    246776643222 111          133444433  379999999999999999


Q ss_pred             cCCC
Q psy10163        412 VAAN  415 (615)
Q Consensus       412 ~a~n  415 (615)
                      ...+
T Consensus        83 ~V~~   86 (105)
T d1dr9a1          83 VVLK   86 (105)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            7653

>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=87.49  E-value=0.11  Score=41.55  Aligned_cols=66  Identities=24%  Similarity=0.404  Sum_probs=43.0

Q ss_pred             ccccCCCeeeeeecccCCCCCeeeccC------Cceee----c---CCCCceEEecC-----CeEEEeeccccCCceeee
Q psy10163        350 VEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSI----D---GSDGHYKLTLD-----GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l----~---~~~g~~~~~~~-----gsl~I~~~~~~DsG~Y~C  411 (615)
                      +.+.+|+.++|.|.... ....|.|-+      ...++    +   ...+++.+..+     .+|+|.++...|++.|.|
T Consensus         3 lsV~eG~~vtL~C~~~~-~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Dsa~YyC   81 (96)
T d1ymmd1           3 LSIQEGENATMNCSYKT-SINNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAADTASYFC   81 (96)
T ss_dssp             CCCSSCCCCCBCCBCSS-CEEEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTTCSCCEE
T ss_pred             ceECCCCCEEEEEEEeC-CcccEEEEEECCCCCccccccccceecccccccceeeccCcceecccCcCCCCcccCEEEeE
Confidence            35678999999997654 356788943      11111    1   12245443322     268999999999999999


Q ss_pred             cCCCC
Q psy10163        412 VAANG  416 (615)
Q Consensus       412 ~a~n~  416 (615)
                      .+...
T Consensus        82 A~~~~   86 (96)
T d1ymmd1          82 ATDTT   86 (96)
T ss_dssp             EEEET
T ss_pred             eEecC
Confidence            76544

>d3cx5k1 b.1.1.1 (K:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=87.42  E-value=0.33  Score=39.35  Aligned_cols=66  Identities=23%  Similarity=0.265  Sum_probs=43.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEec---CCeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+      ...++..       ...++....   ..+|.|.++...|++.|.|.
T Consensus        10 s~~~~~G~~vtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Dsa~YyCa   89 (107)
T d3cx5k1          10 SLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPEDIATYFCQ   89 (107)
T ss_dssp             TCCBCSSSCCEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTCCCEEETTEEEEECSCCCSCCCSEEEEE
T ss_pred             EEEECCCCCEEEEEEcCCCcCCCeEEEEcCCCCcceEEEEeecccCCCcCCCEEEEccCCEEEEEEeEeeecCCCcEEee
Confidence            3557789999999987777777799943      1122211       112332222   22789999999999999996


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        90 ~~   91 (107)
T d3cx5k1          90 HH   91 (107)
T ss_dssp             EC
T ss_pred             eC
Confidence            54

>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of NK receptor NKp46
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.30  E-value=0.17  Score=40.23  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=43.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCcee--ecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC-cccccce
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVS--IDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG-DPIRKEF  425 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~~--l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G-~p~~~~~  425 (615)
                      .-.+..|+.++|+|.... +...+.|.|+...  +.... .........+.|.++...|+|.|.|...+... ......+
T Consensus        12 ~~~V~~G~~VTL~C~~~~-~~~~f~L~k~g~~~~~~~~~-~~~~~~~a~F~i~~v~~~~~G~Y~C~y~~~~~~S~~Sd~l   89 (95)
T d1olla1          12 HFMVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL   89 (95)
T ss_dssp             CSEEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred             CCcccCCCcEEEEEecCC-CccEEEEEECCCCcceeEEc-cCCCccEEEEEEeeeecCCCceEEEEeCCCCCccCCCCCE
Confidence            334668999999998542 2334444432211  11000 00001113588999999999999998654433 2233445


Q ss_pred             eeeec
Q psy10163        426 NVIVR  430 (615)
Q Consensus       426 ~l~V~  430 (615)
                      .|.|+
T Consensus        90 eL~VT   94 (95)
T d1olla1          90 DLVVT   94 (95)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Engineered (including hybrid species)

Probab=87.21  E-value=0.74  Score=37.00  Aligned_cols=66  Identities=23%  Similarity=0.275  Sum_probs=44.2

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.....-...|.|-+      .+.++..       ...++....+   ..|.|.++.+.|++.|.|.
T Consensus         9 sl~~~~G~svtL~C~~~~~~~~~~~WYrq~~g~~p~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Dsa~YyCa   88 (106)
T d1op3k1           9 TLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRFSGSGSGTEFTLTISGLQFDDFATYHCQ   88 (106)
T ss_dssp             EEEECTTCEEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCSEEEEE
T ss_pred             eEEECCCCCEEEEEEeCCCCCCcEEEEecCCCCCCEEEEEccccCCCCcCCceeeeccCCEEEEEEccccccCCCcEeee
Confidence            4667899999999987665566688833      2333311       1134433322   2699999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        89 ~~   90 (106)
T d1op3k1          89 HY   90 (106)
T ss_dssp             EE
T ss_pred             eC
Confidence            54

>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo sapiens), delta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), delta-chain [TaxId: 9606]

Probab=87.00  E-value=0.36  Score=39.61  Aligned_cols=66  Identities=18%  Similarity=0.234  Sum_probs=44.2

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC------Cceeec----------CCCCceEEecCC-----eEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK------GEVSID----------GSDGHYKLTLDG-----VLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k------~~~~l~----------~~~g~~~~~~~g-----sl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|...+. ....|.|-+      .+.++-          ...+++....+.     +|+|.++...|+
T Consensus         9 ~~~~~~G~~vtL~C~~~~~~~~~~i~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~~~Ds   88 (116)
T d1tvda_           9 DQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDS   88 (116)
T ss_dssp             CEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGC
T ss_pred             CEEEcCCCCEEEEEEEcCCccCCcEEEEEeCCCCceEEeeecccccccccCccceEEEEEecCceeEEeeeecCcccccc
Confidence            4667899999999976433 566788932      122221          122455543222     589999999999


Q ss_pred             ceeeecCC
Q psy10163        407 GIYVCVAA  414 (615)
Q Consensus       407 G~Y~C~a~  414 (615)
                      |.|.|...
T Consensus        89 g~YyCa~~   96 (116)
T d1tvda_          89 ATYYCAFT   96 (116)
T ss_dssp             EEEEEEEE
T ss_pred             ccceeeEe
Confidence            99999754

>d2gj6d1 b.1.1.1 (D:15-114) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=86.99  E-value=0.35  Score=38.06  Aligned_cols=61  Identities=21%  Similarity=0.421  Sum_probs=41.0

Q ss_pred             CCeeeeeecccCCCCCeeeccC------Cceeec------CCCCceEEec-----CCeEEEeeccccCCceeeecCCC
Q psy10163        355 GNFVTLRCIAIGYPIPVYTWSK------GEVSID------GSDGHYKLTL-----DGVLQIVGLVRQDAGIYVCVAAN  415 (615)
Q Consensus       355 g~~~tl~C~~~G~P~P~i~w~k------~~~~l~------~~~g~~~~~~-----~gsl~I~~~~~~DsG~Y~C~a~n  415 (615)
                      |+.++|.|.........|.|-+      .+.++.      ...+++....     ..+|+|.++.+.|+|.|.|.+..
T Consensus         1 G~~vtl~C~~~~~~~~~~~Wyrq~~g~~p~~l~~~~~~~~~~~~rf~~~~~~~~~~~sL~I~~~~~~Dsg~YyCa~~~   78 (94)
T d2gj6d1           1 GAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRFTAQLNKASQYVSLLIRDSQPSDSATYLCAVTT   78 (94)
T ss_dssp             TSCEEEEEEECCTTCCEEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEES
T ss_pred             CccEEEEEEEccccCCcEEEEEECCCcccccceeeeeeccCCCCcEEEEecCCCCEEeEEeeccccCcCccceeeEec
Confidence            5789999987777778899943      122221      1224454321     12699999999999999997543

>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=86.60  E-value=0.41  Score=38.49  Aligned_cols=66  Identities=20%  Similarity=0.399  Sum_probs=42.9

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec--CCC-----CceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID--GSD-----GHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~--~~~-----g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.....-...|.|-+      ...++.  ...     .+.....     .-+|.|.++.+.|++.|.
T Consensus         8 ~~~~~~G~~vtl~C~~~~~~~~~~~WYrq~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa~Yy   87 (110)
T d1u3ha1           8 SLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYF   87 (110)
T ss_dssp             SEEEETTSCEEEEEEECCTTEEEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETGGGEEEEEESSCCTTSCSEEE
T ss_pred             EEEEcCCCCEEEEEEecCCCCcEEEEEeeccccceeeeeeeccccccccccceeEEECCCCCeeEeEeccCCCCCceeEe
Confidence            3567789999999987665566788943      122221  111     1222211     126999999999999999


Q ss_pred             ecCC
Q psy10163        411 CVAA  414 (615)
Q Consensus       411 C~a~  414 (615)
                      |.+.
T Consensus        88 Ca~~   91 (110)
T d1u3ha1          88 CAAS   91 (110)
T ss_dssp             ECCE
T ss_pred             eeec
Confidence            9865

>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=86.25  E-value=0.43  Score=38.94  Aligned_cols=67  Identities=19%  Similarity=0.367  Sum_probs=44.0

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------Cceeec--CCC------CceE--Eec---CCeEEEeeccccCCce
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID--GSD------GHYK--LTL---DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~--~~~------g~~~--~~~---~gsl~I~~~~~~DsG~  408 (615)
                      ..+.+.+|+.++|.|.....-.+.+.|-+      ...++-  ...      +...  ...   +.+|.|.++.+.|+|.
T Consensus         8 ~~v~v~~G~svtl~C~~~~~~~~~~~Wyrq~pg~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsg~   87 (115)
T d1i9ea_           8 ARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGLQLLLKYYSGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDSAV   87 (115)
T ss_dssp             SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECGGGCEEECBTTTTBCCEEESSCCGGGCEE
T ss_pred             CeEEECCCCCEEEEEEEcCCCCCCEEEEEECCCCceeeeeeeccceeccccCcceeEEEeCcCCEEEEecccccccccce
Confidence            45778899999999987766677788843      122221  111      1111  111   1269999999999999


Q ss_pred             eeecCC
Q psy10163        409 YVCVAA  414 (615)
Q Consensus       409 Y~C~a~  414 (615)
                      |.|.+.
T Consensus        88 YyCa~~   93 (115)
T d1i9ea_          88 YFCAVS   93 (115)
T ss_dssp             EEEEEE
T ss_pred             eccccc
Confidence            999754

>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1, extracellular domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Programmed cell death protein 1, PD1, extracellular domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.17  E-value=0.55  Score=38.29  Aligned_cols=66  Identities=23%  Similarity=0.429  Sum_probs=44.9

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC----C--ceee--------cCCCCceEEecCC-----eEEEeeccccCCce
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK----G--EVSI--------DGSDGHYKLTLDG-----VLQIVGLVRQDAGI  408 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k----~--~~~l--------~~~~g~~~~~~~g-----sl~I~~~~~~DsG~  408 (615)
                      .+.+.+|+.++|.|...+. ....|.|-+    .  ..++        ....+++.+..+.     +|.|.++.+.|+|.
T Consensus         8 ~l~v~~G~~vtl~C~~~~~~~~~~~~Wyrq~~g~~p~~l~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~~~Dsg~   87 (114)
T d3bp5a1           8 WLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGI   87 (114)
T ss_dssp             EEEEETTCCEEEEEEESCCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEE
T ss_pred             eEEECCCCCEEEEEEECCCCCcceEEEEEECCCCCCeeeEEeeeccccccccCcceEEEeCCCCEEEEEECccCcCCCeE
Confidence            4678899999999987544 345688943    1  1222        1233566654322     58999999999999


Q ss_pred             eeecCC
Q psy10163        409 YVCVAA  414 (615)
Q Consensus       409 Y~C~a~  414 (615)
                      |.|.+.
T Consensus        88 YyCa~~   93 (114)
T d3bp5a1          88 YLCGAI   93 (114)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999754

>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=86.05  E-value=0.44  Score=38.83  Aligned_cols=68  Identities=22%  Similarity=0.311  Sum_probs=45.3

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------Cceeec-CCC-------CceEEec-----CCeEEEeeccccCCce
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID-GSD-------GHYKLTL-----DGVLQIVGLVRQDAGI  408 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~-~~~-------g~~~~~~-----~gsl~I~~~~~~DsG~  408 (615)
                      ..+.+.+|+.++|.|.....-...|.|-+      .+.++. ...       +++....     .-.|.|.++.+.|+|.
T Consensus         8 ~~v~~~~G~~vtl~C~~s~~~~~~i~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa~   87 (115)
T d1j8hd1           8 SHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAE   87 (115)
T ss_dssp             SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECGGGCEEECBGGGTBCCEEESSCCGGGCEE
T ss_pred             CeEEEcCCCCEEEEEEeCCCCceeEEEEEccCCCcceeeeEEeecccccccCCCCEEEECCCCCEEEEeeccccccCCcc
Confidence            35678899999999987766667799943      222221 111       1222211     1269999999999999


Q ss_pred             eeecCCC
Q psy10163        409 YVCVAAN  415 (615)
Q Consensus       409 Y~C~a~n  415 (615)
                      |.|.+..
T Consensus        88 YyCa~~~   94 (115)
T d1j8hd1          88 YFCAVSE   94 (115)
T ss_dssp             EEEEEES
T ss_pred             ceeeecC
Confidence            9998654

>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=85.87  E-value=0.42  Score=38.89  Aligned_cols=66  Identities=11%  Similarity=0.292  Sum_probs=43.7

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC------Ccee--e---cC----------CCCceEEec-----CCeEEEeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK------GEVS--I---DG----------SDGHYKLTL-----DGVLQIVGL  401 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k------~~~~--l---~~----------~~g~~~~~~-----~gsl~I~~~  401 (615)
                      .+.+.+|+.++|.|.+.+. ....|.|-+      .+.+  +   ..          ...++....     ...|+|.++
T Consensus         7 ~~~v~~G~sv~l~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~   86 (115)
T d2atpb1           7 SLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNV   86 (115)
T ss_dssp             EEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSC
T ss_pred             cEEEcCCCCEEEEEEEeCCCCCCceEEEEeecCCCCeEEEEeeEEecccCcEecCCcCCCCEEEEEeCCCCeEEEeeccc
Confidence            4678899999999998763 466789953      2211  1   11          122332221     226999999


Q ss_pred             cccCCceeeecCC
Q psy10163        402 VRQDAGIYVCVAA  414 (615)
Q Consensus       402 ~~~DsG~Y~C~a~  414 (615)
                      ...|+|.|.|...
T Consensus        87 ~~~Dsg~Y~Ca~~   99 (115)
T d2atpb1          87 KPEDSDFYFCATV   99 (115)
T ss_dssp             CGGGCEEEEEEEE
T ss_pred             CCCCCcEEEEeEc
Confidence            9999999999753

>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: NK cell activating receptor NKP44
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.78  E-value=0.52  Score=37.77  Aligned_cols=65  Identities=18%  Similarity=0.317  Sum_probs=42.1

Q ss_pred             ccccCCCeeeeeecccCC--CCCeeeccCCc------eee--cC-----CCCceEEec---CC--eEEEeeccccCCcee
Q psy10163        350 VEAEEGNFVTLRCIAIGY--PIPVYTWSKGE------VSI--DG-----SDGHYKLTL---DG--VLQIVGLVRQDAGIY  409 (615)
Q Consensus       350 v~~~eg~~~tl~C~~~G~--P~P~i~w~k~~------~~l--~~-----~~g~~~~~~---~g--sl~I~~~~~~DsG~Y  409 (615)
                      +.+.+|+.++|.|.....  ....+.|.+..      .++  ..     -.+++.+..   .+  +|.|.++...|+|.|
T Consensus         6 v~~~~G~svtl~C~~~~~~~~~~~~~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~l~~~DsG~Y   85 (108)
T d1hkfa_           6 LQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHY   85 (108)
T ss_dssp             EEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred             EEEcCCCCEEEEEEECCCCCCCCEEEEEEeCCCCCcEEeeeccCccccceeeeEeeeeeCCCCEEEEEEhhhCCCCCEEE
Confidence            678899999999975433  23467895411      121  11     114444332   12  689999999999999


Q ss_pred             eecCC
Q psy10163        410 VCVAA  414 (615)
Q Consensus       410 ~C~a~  414 (615)
                      .|...
T Consensus        86 ~C~v~   90 (108)
T d1hkfa_          86 WCRIY   90 (108)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            99754

>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Polymeric-immunoglobulin receptor, PIGR
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.56  E-value=0.43  Score=38.66  Aligned_cols=66  Identities=27%  Similarity=0.347  Sum_probs=42.1

Q ss_pred             cccccCCCeeeeeecccCCC---CCeeeccCC------ceeecC-------CCCceEEecC-----CeEEEeeccccCCc
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP---IPVYTWSKG------EVSIDG-------SDGHYKLTLD-----GVLQIVGLVRQDAG  407 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P---~P~i~w~k~------~~~l~~-------~~g~~~~~~~-----gsl~I~~~~~~DsG  407 (615)
                      .|.+.+|+.++|.|......   .-.+.|.+.      ..++..       ..+++.+..+     .+|.|.++...|+|
T Consensus         8 ~V~~~~G~svtL~C~y~~~~~~~~~~~~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~l~~~DsG   87 (116)
T d1xeda_           8 EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSG   87 (116)
T ss_dssp             EEEEETTCCEEEEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred             EEEEcCCCCEEEEEEECCCCCccceeEEEEEcCCCCCcEEEEECcccccceecCCccEeeeCCCCEEEEEEhhhCcCCCE
Confidence            57788999999999754322   234668431      112111       1244443322     27999999999999


Q ss_pred             eeeecCC
Q psy10163        408 IYVCVAA  414 (615)
Q Consensus       408 ~Y~C~a~  414 (615)
                      .|.|...
T Consensus        88 ~Y~C~v~   94 (116)
T d1xeda_          88 RYKCGLG   94 (116)
T ss_dssp             EEEEEES
T ss_pred             EEEEEEE
Confidence            9999654

>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 5 [TaxId: 9606]

Probab=85.49  E-value=0.6  Score=37.25  Aligned_cols=66  Identities=21%  Similarity=0.316  Sum_probs=43.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C~  412 (615)
                      .+.+.+|+.++|.|.........|.|-+      ...++..       ...++....+   ..|.|.++.+.|++.|.|.
T Consensus         7 sl~~~~G~svtl~C~~~~~~~~~~~WYrQ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~YyCA   86 (103)
T d8faba1           7 SVSVSPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQRFSSSTSGTTVTLTISGVQAEDEADYYCQ   86 (103)
T ss_dssp             EEEECTTSCEEEEEECTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCEEEEEE
T ss_pred             eEEECCCCCEEEEEEeCCCCCCCEEEEEccCCCceEEEeeeecccccccCCcEEECCCCCccCceEcCcchhHCceEEee
Confidence            4667899999999987766666788943      1222211       1122222211   2688999999999999996


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        87 ~~   88 (103)
T d8faba1          87 AW   88 (103)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=85.27  E-value=0.78  Score=36.99  Aligned_cols=66  Identities=20%  Similarity=0.354  Sum_probs=42.3

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC------CceeecC-------CCCceEEecC---CeEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK------GEVSIDG-------SDGHYKLTLD---GVLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k------~~~~l~~-------~~g~~~~~~~---gsl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|..... ....|.|-+      .+.++..       ...++.+...   ..|.|.++...|++.|.|
T Consensus         7 svsv~~G~~vtl~C~~s~~~~~~~l~WYrq~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa~YyC   86 (110)
T d2esvd1           7 SMDCAEGRAANLPCNHSTISGNEYVYWYRQIHSQGPQYIIHGLKNNETNEMASLIITEDRKSSTLILPHATLRDTAVYYC   86 (110)
T ss_dssp             EEEEETTSCEEEEEECTTCCTTEEEEEEEECTTSCCEEEEEESSSCEECSSCEEEECTTCSEEEEEESSCCGGGCEEEEE
T ss_pred             EEEECCCCCEEEEEEEcCCCCCCeEEEEEECCCCccEEeeeeeceecccccceeeecccCCeeeehhcccccCCceEEEE
Confidence            4678899999999976543 345688943      1222211       1122222222   269999999999999999


Q ss_pred             cCC
Q psy10163        412 VAA  414 (615)
Q Consensus       412 ~a~  414 (615)
                      .+.
T Consensus        87 a~~   89 (110)
T d2esvd1          87 IVV   89 (110)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=85.21  E-value=0.66  Score=37.47  Aligned_cols=67  Identities=21%  Similarity=0.358  Sum_probs=44.2

Q ss_pred             CcccccCCCeeeeeecccCCCCCeeeccC------CceeecCC-------CCceEEec-----CCeEEEeeccccCCcee
Q psy10163        348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDGS-------DGHYKLTL-----DGVLQIVGLVRQDAGIY  409 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~~-------~g~~~~~~-----~gsl~I~~~~~~DsG~Y  409 (615)
                      ..+.+.+|+.++|.|.....-...|.|-+      .+.++...       ..++....     .-.|.|.++.+.|++.|
T Consensus         8 ~~~~~~~G~~vtl~C~~~~~~~~~~~WYrQ~pg~~p~~l~~~~~~~~~~~~~~f~~~~~~~~~~~~L~i~~~~~~Dsa~Y   87 (110)
T d1ac6a_           8 GQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVY   87 (110)
T ss_dssp             SEEEEETTEEEEECEEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEEEEECGGGCEEE
T ss_pred             CeEEECCCCCEEEEEEecCCCCcceEEEEcCCCCceEEeeeeeeecccCCCCceeeeecCCCCEEeeeecCcCcCCCccc
Confidence            45678899999999987655556788933      22222111       12332221     12689999999999999


Q ss_pred             eecCC
Q psy10163        410 VCVAA  414 (615)
Q Consensus       410 ~C~a~  414 (615)
                      .|.+.
T Consensus        88 yCA~~   92 (110)
T d1ac6a_          88 YCALS   92 (110)
T ss_dssp             EEEEE
T ss_pred             ceeec
Confidence            99754

>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=85.15  E-value=0.59  Score=37.78  Aligned_cols=66  Identities=26%  Similarity=0.457  Sum_probs=44.7

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceeec--CC-----CCceEEec-----CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSID--GS-----DGHYKLTL-----DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~--~~-----~g~~~~~~-----~gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|.......+.|.|-+      ...++.  ..     .+++....     ..+|.|.++...|++.|.
T Consensus         9 s~~~~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa~Yy   88 (111)
T d1bd2d1           9 SLSVQEGRISILNCDYTNSMFDYFLWYKKYPAEGPTFLISISSIKDKNADGRFTVFLNKSAKHLSLHIVPSQPGDSAVYF   88 (111)
T ss_dssp             EEEEETTSCEEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEE
T ss_pred             EEEEcCCCCEEEEEEeCCCCCCeEEEEEECCCCcceeeeeeeceeccccCCcceEEEEccCCEEEEEECCCcccccEEEE
Confidence            4667899999999987776677788843      223331  11     13333322     127899999999999999


Q ss_pred             ecCC
Q psy10163        411 CVAA  414 (615)
Q Consensus       411 C~a~  414 (615)
                      |.+.
T Consensus        89 Ca~~   92 (111)
T d1bd2d1          89 CAAM   92 (111)
T ss_dssp             EEEE
T ss_pred             eecc
Confidence            9754

>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ig alpha Fc receptor, FCARI (CD89)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.14  E-value=0.46  Score=37.62  Aligned_cols=69  Identities=17%  Similarity=0.058  Sum_probs=39.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccCCce---eecCCCCceEEecCCeEEEeeccccCCceeeecCCCCCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEV---SIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG  418 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k~~~---~l~~~~g~~~~~~~gsl~I~~~~~~DsG~Y~C~a~n~~G  418 (615)
                      .-.+..|+.++|.|... .+.-.+.|.|+..   ......-.........+.|.++...|+|.|.|...+...
T Consensus        15 ~~~V~~G~~VTL~C~~~-~~~~~f~l~k~g~~~~~~~~~~~~~~~~~~a~F~l~~vt~~~~G~Y~C~y~~~~~   86 (99)
T d1ucta1          15 SPVIPLDGSVKIQCQAI-REAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHY   86 (99)
T ss_dssp             CSEEETTCCEEEEECCC-TTCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTT
T ss_pred             CCceeCCCeEEEEEcCC-CCCcEEEEEECCCcCceeccccccCCCCceEEEEecCCCHHHCceEEEEEECCCc
Confidence            33566899999999765 3344555544210   100000000001223578899999999999998665543

>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.87  E-value=0.57  Score=38.13  Aligned_cols=66  Identities=21%  Similarity=0.359  Sum_probs=42.7

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC------Ccee--e-c-C---------CCCceEEecCC---eEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK------GEVS--I-D-G---------SDGHYKLTLDG---VLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k------~~~~--l-~-~---------~~g~~~~~~~g---sl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|.+.+. ....|.|-+      ...+  + . .         ...++.....+   +|+|.++.+.|
T Consensus         9 ~~t~~~G~~vtL~C~~~~~~~~~~i~WyrQ~~g~~~~~~~~i~~~~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~l~~~D   88 (114)
T d1akjd_           9 DRTWNLGETVELKCQVLLSNPTSGCSWLFQPRGAAASPTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRREN   88 (114)
T ss_dssp             SCCCCTTCCEEEEEEECCSSCCSCEEEEEECSSTTCCCEEEEEESSSCCEECTTCCTTTEEEEEETTEEEEEESSCCGGG
T ss_pred             cEeccCCCcEEEEEEeCCCcCCCCEEEEEECCCCCcEEEEEEecCCCeeEcCCCCCCcEEEEECCCCChhcEEccCCCCC
Confidence            3457789999999987654 355789943      1111  1 0 0         11334333222   69999999999


Q ss_pred             CceeeecCC
Q psy10163        406 AGIYVCVAA  414 (615)
Q Consensus       406 sG~Y~C~a~  414 (615)
                      +|.|.|.+.
T Consensus        89 sg~YyCa~~   97 (114)
T d1akjd_          89 EGYYFCSAL   97 (114)
T ss_dssp             CEEEEEEEE
T ss_pred             CEEEeEeEc
Confidence            999999854

>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=83.94  E-value=1  Score=36.78  Aligned_cols=68  Identities=21%  Similarity=0.421  Sum_probs=46.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------Cceee----------cC--CCCceEEecC----CeEEEeeccccCC
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSI----------DG--SDGHYKLTLD----GVLQIVGLVRQDA  406 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l----------~~--~~g~~~~~~~----gsl~I~~~~~~Ds  406 (615)
                      .+.+.+|+.++|.|...+.....|.|-+      .+.++          ..  ..+++.....    ..|+|.++.+.|+
T Consensus        10 ~~~~~~G~~v~L~C~~~~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~L~i~~~~~~Ds   89 (118)
T d2ij0c1          10 MVIVKSGTSVKIECRSLDTNIHTMFWYRQFPKQSLMLMATSHQGFNAIYEQGVVKDKFLINHASPTLSTLTVTSAHPEDS   89 (118)
T ss_dssp             EEEECTTCCEEEEEEECSSCCSEEEEEEECTTSCEEEEEEEETTSCCEECTTCCTTTEEEEECSSSEEEEEECSCCGGGC
T ss_pred             eEEEcCCCCEEEEEEEcCCcccEEEEEEEcccccceeeeeccccccceeccccccccceeeccccccccccccccccccC
Confidence            3567889999999988777677899943      12221          00  1234443322    2589999999999


Q ss_pred             ceeeecCCCC
Q psy10163        407 GIYVCVAANG  416 (615)
Q Consensus       407 G~Y~C~a~n~  416 (615)
                      +.|.|.+...
T Consensus        90 a~YyCa~~~~   99 (118)
T d2ij0c1          90 GFYVCSALAG   99 (118)
T ss_dssp             EEEEEEEECS
T ss_pred             ceEEEEEecC
Confidence            9999986543

>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=83.91  E-value=0.42  Score=38.88  Aligned_cols=68  Identities=24%  Similarity=0.431  Sum_probs=46.1

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC---C---ceee--cCC-----CCceEEecC-----CeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK---G---EVSI--DGS-----DGHYKLTLD-----GVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k---~---~~~l--~~~-----~g~~~~~~~-----gsl~I~~~~~~DsG~Y~  410 (615)
                      .+.+.+|+.++|.|...+.....|.|-+   +   +.++  ...     .+++.+...     .+|.|.++...|+|.|.
T Consensus         9 ~v~v~~G~sv~L~C~~s~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~Dsg~Yy   88 (113)
T d2bnqd1           9 ALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYL   88 (113)
T ss_dssp             EEEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCCEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEE
T ss_pred             EEEEcCCCCEEEEEEEecCcccCCeEEEeccccccceeeeeccceecccccceeeeeccCCCEEEeeeecCCCCCCcEEe
Confidence            4677889999999998877777899943   1   2222  111     123332221     27999999999999999


Q ss_pred             ecCCCC
Q psy10163        411 CVAANG  416 (615)
Q Consensus       411 C~a~n~  416 (615)
                      |.+...
T Consensus        89 Ca~~~~   94 (113)
T d2bnqd1          89 CAVRPT   94 (113)
T ss_dssp             EEEEES
T ss_pred             EeEecC
Confidence            986543

>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: TREM-1 (triggering receptor expressed on myeloid cells 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.87  E-value=0.2  Score=40.84  Aligned_cols=67  Identities=22%  Similarity=0.326  Sum_probs=43.1

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccC------CceeecCC----------CCceEEecC---C--eEEEeeccccC
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSK------GEVSIDGS----------DGHYKLTLD---G--VLQIVGLVRQD  405 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k------~~~~l~~~----------~g~~~~~~~---g--sl~I~~~~~~D  405 (615)
                      .+.+.+|+.++|.|...+.  ....+.|.+      ...++...          .+++.+..+   +  +|+|.++...|
T Consensus         8 ~~~v~eG~svtl~C~~~~~~~~~~~~~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~Lti~~l~~~D   87 (113)
T d1smoa_           8 KYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVED   87 (113)
T ss_dssp             EEECCTTCCEEEEEECCHHHHTTSCEEEEEECTTSCCEEEEECCSSCCSSCCEEETTEEEEEETTTTEEEEEECSCCGGG
T ss_pred             cEEEccCCCEEEEEEeCCCCCCCCEEEEEECCCCCCCEEEEecCCCCceEcceECCeEEEEEECCCCEEEEEEccCCccc
Confidence            4667789999999976532  345678853      12222111          135544322   2  58899999999


Q ss_pred             CceeeecCCC
Q psy10163        406 AGIYVCVAAN  415 (615)
Q Consensus       406 sG~Y~C~a~n  415 (615)
                      +|.|.|....
T Consensus        88 sg~Y~Cav~~   97 (113)
T d1smoa_          88 SGLYQCVIYQ   97 (113)
T ss_dssp             CEEEEEEECC
T ss_pred             CceEEEEEEC
Confidence            9999997543

>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=82.69  E-value=0.56  Score=38.06  Aligned_cols=69  Identities=20%  Similarity=0.248  Sum_probs=43.3

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccC------Cceeec--CC------CCceEE--ecCC---eEEEeeccccCCc
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSK------GEVSID--GS------DGHYKL--TLDG---VLQIVGLVRQDAG  407 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k------~~~~l~--~~------~g~~~~--~~~g---sl~I~~~~~~DsG  407 (615)
                      ..+.+.+|+.++|.|... ......|.|-+      ...++.  ..      .+++.+  ...+   +|.|.++...|+|
T Consensus         8 ~~v~v~~G~~VtL~C~~~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsg   87 (114)
T d2ak4d1           8 TEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSA   87 (114)
T ss_dssp             CEEEEETTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred             CeEEEeCCCCEEEEEEEcCCCcCccEEEEEccccCcceEeeeEeeeeecCCCCcceEEEEcCCCCEEEEeecccccccCC
Confidence            456788999999999754 33455688933      122221  11      122222  2222   6899999999999


Q ss_pred             eeeecCCCC
Q psy10163        408 IYVCVAANG  416 (615)
Q Consensus       408 ~Y~C~a~n~  416 (615)
                      .|.|.+...
T Consensus        88 ~YyCa~~~~   96 (114)
T d2ak4d1          88 VYFCALSGF   96 (114)
T ss_dssp             EEEEEEECS
T ss_pred             CceEeCCCC
Confidence            999975443

>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 5 [TaxId: 9606]

Probab=81.33  E-value=1.2  Score=36.02  Aligned_cols=66  Identities=15%  Similarity=0.225  Sum_probs=43.5

Q ss_pred             cccccCCCeeeeeecccCCCCCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeeec
Q psy10163        349 TVEAEEGNFVTLRCIAIGYPIPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVCV  412 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C~  412 (615)
                      -+.+.+|+.++|.|.....-..-|.|-+      ...++..       ...++.....+   .|.|.++...|++.|.|.
T Consensus         9 sl~~~~G~svtl~C~~~~~~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~DsavYyCA   88 (109)
T d1w72l1           9 SVSVAPGQTARITCGGNNIGSRSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQ   88 (109)
T ss_dssp             EEEECTTSCEEEEEECTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             eEEECCCCCEEEEEEcCCCCCcceeeeeccccceeEEEEEccccCCCceeeeEeeecCCCccceEEeeeccCCCEEEEEE
Confidence            3667889999999987655556788832      2222211       11233332222   688999999999999997


Q ss_pred             CC
Q psy10163        413 AA  414 (615)
Q Consensus       413 a~  414 (615)
                      +.
T Consensus        89 ~~   90 (109)
T d1w72l1          89 VW   90 (109)
T ss_dssp             EE
T ss_pred             ec
Confidence            54

>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=80.92  E-value=1.7  Score=34.99  Aligned_cols=67  Identities=22%  Similarity=0.355  Sum_probs=43.4

Q ss_pred             cccccCCCeeeeeecccCCC-CCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGYP-IPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~P-~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|...+.. ...|.|-+      ...++..       ..+++.+..+.   .|.|..+...|++.|.|
T Consensus         7 ~~~~~~G~svtl~C~~s~~~~~~~~~WYrQ~pg~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~Dsa~YyC   86 (112)
T d1kgcd1           7 SMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYC   86 (112)
T ss_dssp             EEEEETTSCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEE
T ss_pred             EEEECCCCCEEEEEEEeCCCccccEEEEEECCCCCcceeeeecceeccccccceeecccCCeeEEEEeecccccceeEee
Confidence            46678999999999876544 45689943      2222211       11222233222   58899999999999999


Q ss_pred             cCCC
Q psy10163        412 VAAN  415 (615)
Q Consensus       412 ~a~n  415 (615)
                      ....
T Consensus        87 a~~~   90 (112)
T d1kgcd1          87 ILPL   90 (112)
T ss_dssp             ECCC
T ss_pred             eEec
Confidence            7654

>d2fx7l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 3.2 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Human (Homo sapiens), cluster 3.2 [TaxId: 9606]

Probab=80.81  E-value=1.1  Score=36.01  Aligned_cols=66  Identities=24%  Similarity=0.327  Sum_probs=42.8

Q ss_pred             cccccCCCeeeeeecccCC-CCCeeeccC------CceeecC-------CCCceEEecCC---eEEEeeccccCCceeee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY-PIPVYTWSK------GEVSIDG-------SDGHYKLTLDG---VLQIVGLVRQDAGIYVC  411 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~-P~P~i~w~k------~~~~l~~-------~~g~~~~~~~g---sl~I~~~~~~DsG~Y~C  411 (615)
                      .+.+.+|+.++|.|..... ....|.|-+      ...++..       ...++.....+   .|+|.++.+.|++.|.|
T Consensus        10 ~~~v~~G~tv~l~C~~~~~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~L~I~~~~~~Dsa~YyC   89 (108)
T d2fx7l1          10 TQSLSPGERATLSCRASQSVGNNKLAWYQQRPGQAPRLLIYGASSRPSGVADRFSGSGSGTDFTLTISRLEPEDFAVYYC   89 (108)
T ss_dssp             EEEECTTCCEEEEEEESSCCGGGCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred             eEEECCCCCEEEEEEeecCCCCccceeEeccccCCCEEEEeeecccccCCccceeeecCCCEEEEEehHheecccEEEee
Confidence            4678899999999986544 345688833      2233311       11233322222   59999999999999999


Q ss_pred             cCC
Q psy10163        412 VAA  414 (615)
Q Consensus       412 ~a~  414 (615)
                      .+.
T Consensus        90 a~~   92 (108)
T d2fx7l1          90 QQY   92 (108)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            754

>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=80.62  E-value=0.81  Score=37.01  Aligned_cols=67  Identities=24%  Similarity=0.346  Sum_probs=43.5

Q ss_pred             CcccccCCCeeeeeeccc-CCCCCeeeccC------Cceeec----CC----CCceEEecC-----CeEEEeeccccCCc
Q psy10163        348 PTVEAEEGNFVTLRCIAI-GYPIPVYTWSK------GEVSID----GS----DGHYKLTLD-----GVLQIVGLVRQDAG  407 (615)
Q Consensus       348 ~~v~~~eg~~~tl~C~~~-G~P~P~i~w~k------~~~~l~----~~----~g~~~~~~~-----gsl~I~~~~~~DsG  407 (615)
                      ..+.+.+|+.++|.|... ......|.|-+      ...++.    ..    .+++.+..+     .+|.|.++...|++
T Consensus         7 ~~v~~~~G~~Vtl~C~~~~~~~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa   86 (115)
T d1fo0a_           7 TSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSA   86 (115)
T ss_dssp             CEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred             CEEEEcCCCCEEEEEEEcCCCCCCCCEEEEeCCCCCCEEEEEEecceeecccCCceEEEEeccCCEEEEEECCCCccccc
Confidence            456788999999999754 34455688943      111221    11    134433321     25999999999999


Q ss_pred             eeeecCC
Q psy10163        408 IYVCVAA  414 (615)
Q Consensus       408 ~Y~C~a~  414 (615)
                      .|.|...
T Consensus        87 ~YyCa~~   93 (115)
T d1fo0a_          87 VYFCAMR   93 (115)
T ss_dssp             EEEEEEE
T ss_pred             cccceee
Confidence            9999754

>d2rhea_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 2 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 2 [TaxId: 9606]

Probab=80.29  E-value=1.8  Score=35.17  Aligned_cols=66  Identities=21%  Similarity=0.329  Sum_probs=43.4

Q ss_pred             cccccCCCeeeeeecccCC--CCCeeeccC------CceeecC-------CCCceEEec---CCeEEEeeccccCCceee
Q psy10163        349 TVEAEEGNFVTLRCIAIGY--PIPVYTWSK------GEVSIDG-------SDGHYKLTL---DGVLQIVGLVRQDAGIYV  410 (615)
Q Consensus       349 ~v~~~eg~~~tl~C~~~G~--P~P~i~w~k------~~~~l~~-------~~g~~~~~~---~gsl~I~~~~~~DsG~Y~  410 (615)
                      -+.+.+|+.++|.|.+.+.  ....|.|-+      ..+++..       ...++....   ...|.|.++...|++.|.
T Consensus         9 s~~v~~G~svtL~C~~s~~~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsA~Yy   88 (114)
T d2rhea_           9 SASGTPGQRVTISCTGSATDIGSNSVIWYQQVPGKAPKLLIYYNDLLPSGVSDRFSASKSGTSASLAISGLESEDEADYY   88 (114)
T ss_dssp             EEEECTTCCEEEEEECCTTTTTTSCEEEEECCTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred             cEEeCCCCCEEEEEEECCccccCCcccceeeecccceEEEEEEeeeeccCCCCcceecCCCCeeeeEecccCcccCceEE
Confidence            3667789999999987654  356788942      2223211       112343332   237999999999999999


Q ss_pred             ecCC
Q psy10163        411 CVAA  414 (615)
Q Consensus       411 C~a~  414 (615)
                      |.+.
T Consensus        89 CA~~   92 (114)
T d2rhea_          89 CAAW   92 (114)
T ss_dssp             EEEE
T ss_pred             Eeec
Confidence            9754