Psyllid ID: psy10301
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1119 | 2.2.26 [Sep-21-2011] | |||||||
| Q16720 | 1220 | Plasma membrane calcium-t | yes | N/A | 0.968 | 0.888 | 0.618 | 0.0 | |
| Q64568 | 1258 | Plasma membrane calcium-t | yes | N/A | 0.961 | 0.855 | 0.618 | 0.0 | |
| Q9R0K7 | 1198 | Plasma membrane calcium-t | no | N/A | 0.962 | 0.898 | 0.621 | 0.0 | |
| P11506 | 1243 | Plasma membrane calcium-t | no | N/A | 0.951 | 0.856 | 0.604 | 0.0 | |
| Q01814 | 1243 | Plasma membrane calcium-t | no | N/A | 0.967 | 0.871 | 0.595 | 0.0 | |
| P11505 | 1258 | Plasma membrane calcium-t | no | N/A | 0.934 | 0.831 | 0.637 | 0.0 | |
| Q64542 | 1203 | Plasma membrane calcium-t | no | N/A | 0.952 | 0.886 | 0.615 | 0.0 | |
| P58165 | 1112 | Plasma membrane calcium-t | N/A | N/A | 0.890 | 0.896 | 0.643 | 0.0 | |
| P20020 | 1258 | Plasma membrane calcium-t | no | N/A | 0.934 | 0.831 | 0.637 | 0.0 | |
| P23634 | 1241 | Plasma membrane calcium-t | no | N/A | 0.939 | 0.846 | 0.618 | 0.0 |
| >sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/1151 (61%), Positives = 856/1151 (74%), Gaps = 67/1151 (5%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+G TL +LR LME+RG E + KI E YG V +C++L TSP EGL + DLE RR+++G
Sbjct: 27 FGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH----------D 119
N IPPK KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE D
Sbjct: 87 QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAED 146
Query: 120 NEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQI 179
E + WIEGAAIL+SVI VVLVTAFND+SKEKQFRGLQ++IE E KF VIR +L Q+
Sbjct: 147 EGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQV 206
Query: 180 FVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTH 239
V +VVGDI Q+KYGDLLPADG+LIQ+NDLKIDESSLTGESDHV+K DPM+LSGTH
Sbjct: 207 PVAALVVGDIAQVKYGDLLPADGVLIQANDLKIDESSLTGESDHVRKSADKDPMLLSGTH 266
Query: 240 VMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEV-----------KQEKKDKKKKKRDEE 288
VMEGSG+MVVTAVGVNSQ GIIFTLLGA +EE E K KK+D
Sbjct: 267 VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGKQQDGAMESSQTKAKKQDGA 326
Query: 289 SAIEAIDMKPVEVAEKHD----------EKKSVLQAKLTKLAIQIGYAGSTIAILTVVIL 338
A+E +K E E + ++KSVLQ KLTKLA+QIG AG ++ +TV+IL
Sbjct: 327 VAMEMQPLKSAEGGEMEEREKKKANAPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIIL 386
Query: 339 ISQYCVKKFVIEDEEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVK 394
+ + ++ FV+E W A +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVK
Sbjct: 387 VLYFVIETFVVEGRTWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVK 446
Query: 395 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454
KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+ + YK IP +
Sbjct: 447 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTP 506
Query: 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLP 514
I +V IS+NS YT+KI+ PE LP+QVGNKTECALLGFV+ + +++Q VR+ +P
Sbjct: 507 KILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGFVLDLKRDFQPVREQIP 566
Query: 515 EEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDM 573
E+ +VYTFNSVRKSMSTVI +G +R+++KGASEI+LKKC+ I NG L F
Sbjct: 567 EDKLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRD 626
Query: 574 QGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCV 633
+ +VR +IEPMACDGLRTI IAY+DF + +P+WD+E+ +V LTC+ V
Sbjct: 627 RDDMVRKIIEPMACDGLRTICIAYRDFSAGQ----------EPDWDNENEVVGDLTCIAV 676
Query: 634 IGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 693
+GIEDPVRPEVPEAI+KCQRAGIT+RMVTGDNINTAR+IA KCGI++PGED+L LEGKEF
Sbjct: 677 VGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEF 736
Query: 694 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 753
NRR+R+ GE++Q LDKVWP+LRVLARSSP+DK+TLVKG+IDS R+VVAVTGDGT
Sbjct: 737 NRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGT 796
Query: 754 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQ 813
NDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQ
Sbjct: 797 NDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQ 856
Query: 814 LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873
LTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR
Sbjct: 857 LTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGR 916
Query: 874 TKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTF 933
K LIS+TMMKNI+G A+YQL IIF +LF G+ DI +GR A S P++H+TIIFNTF
Sbjct: 917 DKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTF 976
Query: 934 VLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993
V+M LFNEINARKIHG+RNVF+G+F+NPIF +I + T Q++IVQ+GG F+ L+ E
Sbjct: 977 VMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTE 1036
Query: 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAA------------MNTRQ 1041
QW WCLF GVG LVW Q++ T+PT +L + G G + E R+
Sbjct: 1037 QWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEIDHAERE 1096
Query: 1042 QRAAHILWLRGLTRLQTQLRVIRAFKSNL-EDLEERRSAQSLRSARS-------QLGNQR 1093
R ILW RGL R+QTQ+RV++AF+S+L E LE+ S S+ + + +
Sbjct: 1097 LRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESKTSIHNFMATPEFLINDYTHNI 1156
Query: 1094 PLSDITYIDED 1104
PL D T +DE+
Sbjct: 1157 PLIDDTDVDEN 1167
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1390 bits (3599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/1142 (61%), Positives = 846/1142 (74%), Gaps = 66/1142 (5%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+G TL +LR LME+RG E + KI E YG V +C++L TSP EGL + DLE RR+++G
Sbjct: 27 FGCTLAELRSLMELRGAEALQKIQEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH----------D 119
N IPPK KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE D
Sbjct: 87 QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAED 146
Query: 120 NEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQI 179
E + WIEGAAIL+SVI VVLVTAFND+SKEKQFRGLQ++IE E KF VIR +L Q+
Sbjct: 147 EGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQV 206
Query: 180 FVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTH 239
V +VVGDI Q+KYGDLLPADG+LIQ NDLKIDESSLTGESDHV+K DPM+LSGTH
Sbjct: 207 PVAALVVGDIAQVKYGDLLPADGVLIQGNDLKIDESSLTGESDHVRKSADKDPMLLSGTH 266
Query: 240 VMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEV-----------KQEKKDKKKKKRDEE 288
VMEGSG+MVVTAVGVNSQ GIIFTLLGA +EE E K KK+D
Sbjct: 267 VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGKQQDGAMESSQTKAKKQDGA 326
Query: 289 SAIEAIDMKPVEVAEKHD----------EKKSVLQAKLTKLAIQIGYAGSTIAILTVVIL 338
A+E +K E E + ++KSVLQ KLTKLA+QIG AG ++ +TV+IL
Sbjct: 327 VAMEMQPLKSAEGGEMEEREKKKANVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIIL 386
Query: 339 ISQYCVKKFVIEDEEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVK 394
+ + ++ FV++ W A +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVK
Sbjct: 387 VLYFVIETFVVDGRVWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVK 446
Query: 395 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454
KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+ + YK IP +
Sbjct: 447 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTP 506
Query: 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLP 514
I +V IS+NS YT+KI+ PE LP+QVGNKTECALLGF++ + +++Q VR+ +P
Sbjct: 507 KILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGFILDLKRDFQPVREQIP 566
Query: 515 EEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDM 573
E+ +VYTFNSVRKSMSTVI +G +R+++KGASEI+LKKC+ I NG L F
Sbjct: 567 EDQLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRD 626
Query: 574 QGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCV 633
+ +V+ +IEPMACDGLRTI IAY+DF + +P+WD+E+ +V LTC+ V
Sbjct: 627 RDDMVKKIIEPMACDGLRTICIAYRDFSAIQ----------EPDWDNENEVVGDLTCIAV 676
Query: 634 IGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 693
+GIEDPVRPEVPEAI+KCQRAGIT+RMVTGDNINTAR+IA KCGI++PGED+L LEGKEF
Sbjct: 677 VGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEF 736
Query: 694 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 753
NRR+R+ GE++Q LDKVWP+LRVLARSSP+DK+TLVKG+IDS R+VVAVTGDGT
Sbjct: 737 NRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGT 796
Query: 754 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQ 813
NDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQ
Sbjct: 797 NDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQ 856
Query: 814 LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873
LTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR
Sbjct: 857 LTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGR 916
Query: 874 TKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTF 933
K LIS+TMMKNI+G A+YQL IIF +LF G+ DI +GR A S P++H+TIIFNTF
Sbjct: 917 DKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTF 976
Query: 934 VLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993
V+M LFNEINARKIHG+RNVF+G+F+NPIF +I + T Q++IVQ+GG F+ L+ E
Sbjct: 977 VMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTE 1036
Query: 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAA------------MNTRQ 1041
QW WCLF GVG LVW Q++ T+PT +L + G G + E R+
Sbjct: 1037 QWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEIDHAERE 1096
Query: 1042 QRAAHILWLRGLTRLQTQLRVIRAFK--SNLEDLEERRSAQSLRSARSQLGNQRPLSDIT 1099
R ILW RGL R+QTQ+ V+ FK + + RRS S SQL + LS T
Sbjct: 1097 LRRGQILWFRGLNRIQTQMEVVSTFKRSGSFQGAVRRRS-----SVLSQLHDVTNLSTPT 1151
Query: 1100 YI 1101
+I
Sbjct: 1152 HI 1153
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1375 bits (3559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/1144 (62%), Positives = 856/1144 (74%), Gaps = 67/1144 (5%)
Query: 10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G T+ +LR LME+RG E + KI E YG IC++L TSP EGL G+ DLE R+++F
Sbjct: 23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH---------- 118
G N IPPK KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGESNEGCATAQGGAE 142
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E + WIEGAAIL+SVI VVLVTAFND+SKEKQFRGLQ++IE E KF V+R ++ Q
Sbjct: 143 DEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQ 202
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I V +IVVGDI QIKYGDLLPADG+ IQ NDLKIDESSLTGESD V+K DPM+LSGT
Sbjct: 203 IPVAEIVVGDIAQIKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGT 262
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKP 298
HVMEGSG+MVVTAVGVNSQ GIIFTLLGA E+++KK KK ++ A++M+P
Sbjct: 263 HVMEGSGRMVVTAVGVNSQTGIIFTLLGAGG------EEEEKKDKKAKQQDGAAAMEMQP 316
Query: 299 VEVAE-----------KHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKF 347
++ AE H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V F
Sbjct: 317 LKSAEGGDADDKKKANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTF 376
Query: 348 VIEDEEW----KAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLV 403
V+ + W +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLV
Sbjct: 377 VVNKKPWLTECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLV 436
Query: 404 RHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEG 463
RHLDACETMGNATAICSDKTGTLTTNRMT VQAYV +V YK IP I +V
Sbjct: 437 RHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLVNA 496
Query: 464 ISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT 523
I++NS YT+KI+ PE LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYT
Sbjct: 497 IAINSAYTTKILPPEKEGALPRQVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYT 556
Query: 524 FNSVRKSMSTVIPKKN-GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVI 582
FNSVRKSMSTVI + +R+Y+KGASEI+LKKC I G F + +V+ VI
Sbjct: 557 FNSVRKSMSTVIKMPDESFRMYSKGASEIVLKKCCKILSGAGEARVFRPRDRDEMVKKVI 616
Query: 583 EPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 642
EPMACDGLRTI +AY+DF + +P+WD+E++I++ LTC+CV+GIEDPVRP
Sbjct: 617 EPMACDGLRTICVAYRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRP 666
Query: 643 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNG 702
EVPEAI+KCQRAGIT+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ G
Sbjct: 667 EVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKG 726
Query: 703 EVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762
E++Q +DK+WP+LRVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKA
Sbjct: 727 EIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKA 786
Query: 763 DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVI 822
DVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVI
Sbjct: 787 DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVI 846
Query: 823 VAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTM 882
VAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TM
Sbjct: 847 VAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTM 906
Query: 883 MKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEI 942
MKNI+G A+YQL +IF +LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEI
Sbjct: 907 MKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEI 966
Query: 943 NARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFG 1002
NARKIHG+RNVF+G+F NPIF +I + T Q++IVQ+GG F+ L L+QW WC+F G
Sbjct: 967 NARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1026
Query: 1003 VGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNT------------RQQRAAHILWL 1050
+G LVW Q++ T+PT RL + GR + E R+ R ILW
Sbjct: 1027 LGELVWGQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEEIDHAERELRRGQILWF 1086
Query: 1051 RGLTRLQTQLRVIRAFKSNL-EDLEERRSAQSL---------RSARSQLGNQRPLSDITY 1100
RGL R+QTQ+RV++AF+S+L E LE+ S S+ R SQ PL D T
Sbjct: 1087 RGLNRIQTQIRVVKAFRSSLYEGLEKPESRTSIHNFMAHPEFRIEDSQ--PHIPLIDDTD 1144
Query: 1101 IDED 1104
++ED
Sbjct: 1145 LEED 1148
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Plays a role in maintaining balance and hearing. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1368 bits (3541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/1154 (60%), Positives = 845/1154 (73%), Gaps = 89/1154 (7%)
Query: 10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G ++ +LR LME+RG E + KI E YG IC++L TSP EGL G+ DLE R+++F
Sbjct: 23 EFGCSMEELRSLMELRGTEAVVKIKETYGDTESICRRLKTSPVEGLPGTAPDLEKRKQIF 82
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH---------- 118
G N IPPK KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGESNEGCATAQGGAE 142
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E + WIEGAAIL+SVI VVLVTAFND+SKEKQFRGLQ++IE E KF V+R ++ Q
Sbjct: 143 DEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQ 202
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I V +IVVGDI QIKYGDLLPADG+ IQ NDLKIDESSLTGESD V+K DPM+LSGT
Sbjct: 203 IPVAEIVVGDIAQIKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGT 262
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATD----------------------------- 269
HVMEGSG+MVVTAVGVNSQ GIIFTLLGA
Sbjct: 263 HVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGVKKGDGLQLPAADGAAPAN 322
Query: 270 ----------DEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAE-----------KHDEK 308
+ +++ D + K ++ A++M+P++ AE H ++
Sbjct: 323 AAGSANASLVNGKMQDGSADSSQSKAKQQDGAAAMEMQPLKSAEGGDADDKKKANMHKKE 382
Query: 309 KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAIYFREFVR 364
KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ + W +Y + FV+
Sbjct: 383 KSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLTECTPVYVQYFVK 442
Query: 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424
FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG
Sbjct: 443 FFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 502
Query: 425 TLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484
TLTTNRMT VQAYV +V YK IP I +V I++NS YT+KI+ PE LP
Sbjct: 503 TLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLVNAIAINSAYTTKILPPEKEGALP 562
Query: 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKN-GYRV 543
+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRKSMSTVI + +R+
Sbjct: 563 RQVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKMPDESFRM 622
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
Y+KGASEI+LKKC I G F + +V+ VIEPMACDGLRTI +AY+DF +
Sbjct: 623 YSKGASEIVLKKCCKILSGAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDFPSS 682
Query: 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 663
+P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI+KCQRAGIT+RMVTG
Sbjct: 683 P----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTG 732
Query: 664 DNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 723
DNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q +DK+WP+LRVLARSS
Sbjct: 733 DNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSS 792
Query: 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 783
P+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDII
Sbjct: 793 PTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 852
Query: 784 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 843
LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLW
Sbjct: 853 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLW 912
Query: 844 VNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 903
VNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL +IF +LF
Sbjct: 913 VNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFV 972
Query: 904 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIF 963
G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G+F NPIF
Sbjct: 973 GEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIF 1032
Query: 964 YSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKI 1023
+I + T Q++IVQ+GG F+ L L+QW WC+F G+G LVW Q++ T+PT RL +
Sbjct: 1033 CTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIPTSRLKFL 1092
Query: 1024 FSWGRGQPESEAAMNT------------RQQRAAHILWLRGLTRLQTQLRVIRAFKSNL- 1070
GR + E R+ R ILW RGL R+QTQ+RV++AF+S+L
Sbjct: 1093 KEAGRLTQKEEIPEEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLY 1152
Query: 1071 EDLEERRSAQSLRS 1084
E LE+ S S+ +
Sbjct: 1153 EGLEKPESRTSIHN 1166
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1364 bits (3530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/1183 (59%), Positives = 853/1183 (72%), Gaps = 100/1183 (8%)
Query: 10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G T+ +LR LME+RG E + KI E YG IC++L TSP EGL G+ DLE R+++F
Sbjct: 23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH---------- 118
G N IPPK KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GE
Sbjct: 83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGEGNEGCATAQGGAE 142
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E + WIEGAAIL+SVI VVLVTAFND+SKEKQFRGLQ++IE E KF V+R ++ Q
Sbjct: 143 DEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQ 202
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I V +IVVGDI Q+KYGDLLPADG+ IQ NDLKIDESSLTGESD V+K DPM+LSGT
Sbjct: 203 IPVAEIVVGDIAQVKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGT 262
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATD----------------------------- 269
HVMEGSG+M+VTAVGVNSQ GIIFTLLGA
Sbjct: 263 HVMEGSGRMLVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGVKKGDGLQLPAADGAAASN 322
Query: 270 ----------DEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAE-----------KHDEK 308
+ +++ D + K ++ A++M+P++ AE H ++
Sbjct: 323 AADSANASLVNGKMQDGNVDASQSKAKQQDGAAAMEMQPLKSAEGGDADDRKKASMHKKE 382
Query: 309 KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAIYFREFVR 364
KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ + W +Y + FV+
Sbjct: 383 KSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLPECTPVYVQYFVK 442
Query: 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424
FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG
Sbjct: 443 FFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 502
Query: 425 TLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484
TLTTNRMT VQAYV +V YK IP I ++ I++NS YT+KI+ PE LP
Sbjct: 503 TLTTNRMTVVQAYVGDVHYKEIPDPSSINTKTMELLINAIAINSAYTTKILPPEKEGALP 562
Query: 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP-KKNGYRV 543
+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRKSMSTVI +R+
Sbjct: 563 RQVGNKTECGLLGFVLDLKQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKLPDESFRM 622
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
Y+KGASEI+LKKC I G F + +V+ VIEPMACDGLRTI +AY+DF +
Sbjct: 623 YSKGASEIVLKKCCKILNGAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDFPSS 682
Query: 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 663
+P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI+KCQRAGIT+RMVTG
Sbjct: 683 P----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTG 732
Query: 664 DNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 723
DNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q +DK+WP+LRVLARSS
Sbjct: 733 DNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSS 792
Query: 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 783
P+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDII
Sbjct: 793 PTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 852
Query: 784 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 843
LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLW
Sbjct: 853 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLW 912
Query: 844 VNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 903
VNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL +IF +LF
Sbjct: 913 VNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLALIFTLLFV 972
Query: 904 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIF 963
G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G+F NPIF
Sbjct: 973 GEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIF 1032
Query: 964 YSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKI 1023
+I + T Q++IVQ+GG F+ L L+QW WC+F G+G LVW Q++ T+PT RL +
Sbjct: 1033 CTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIPTSRLKFL 1092
Query: 1024 FSWGRGQPESEAAMNT------------RQQRAAHILWLRGLTRLQTQLRVIRAFKSNL- 1070
GR + E R+ R ILW RGL R+QTQ+RV++AF+S+L
Sbjct: 1093 KEAGRLTQKEEIPEEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLY 1152
Query: 1071 EDLEERRSAQSL---------RSARSQLGNQRPLSDITYIDED 1104
E LE+ S S+ R SQ PL D T ++ED
Sbjct: 1153 EGLEKPESRTSIHNFMAHPEFRIEDSQ--PHIPLIDDTDLEED 1193
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1357 bits (3511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1112 (63%), Positives = 849/1112 (76%), Gaps = 66/1112 (5%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+GITL +LR LME+R + + KI E YG V IC KL TSPNEGL G+ DLE R VFG
Sbjct: 27 FGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERREAVFG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNE-------- 121
N IPPK KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P E DN
Sbjct: 87 KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP---PEGDNALCGEVSVG 143
Query: 122 ----ETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
E + WIEGAAIL+SV+ VVLVTAFND+SKEKQFRGLQ++IE E KF VIR ++
Sbjct: 144 EEEGEGETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVI 203
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DI VGDI Q+KYGDLLPADGILIQ NDLKIDESSLTGESDHVKK DP++LSG
Sbjct: 204 QIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPLLLSG 263
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIE----- 292
THVMEGSG+MVVTAVGVNSQ GIIFTLLGA +EE K+++K K+KK + ++ AIE
Sbjct: 264 THVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDEKKKEKKNKKQDGAIENRNKA 323
Query: 293 ------AIDMKPVEVAEKHD-------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
A++M+P++ E D ++KSVLQ KLTKLA+QIG AG ++ +
Sbjct: 324 KAQDGAAMEMQPLKSEEGGDGDEKDKKKANLPKKEKSVLQGKLTKLAVQIGKAGLLMSAI 383
Query: 334 TVVILISQYCVKKFVIEDEEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSL 389
TV+IL+ + + F ++ W A IY + FV+FF++GVTVLVVAVPEGLPLAVT+SL
Sbjct: 384 TVIILVLYFVIDTFWVQKRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISL 443
Query: 390 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY 449
AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT NRMT VQAY+ E YK +P+
Sbjct: 444 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEP 503
Query: 450 EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTV 509
E IP +I S +V GISVN YTSKI+ PE LP+ VGNKTECALLGF++ + ++YQ V
Sbjct: 504 EAIPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKTECALLGFLLDLKRDYQDV 563
Query: 510 RDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEK 568
R+++PEE +VYTFNSVRKSMSTV+ +G +R+++KGASEIILKKC I NG +
Sbjct: 564 RNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKV 623
Query: 569 FTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL 628
F + +V+ VIEPMA +GLRTI +A++DF + E P WD+E+++V+ L
Sbjct: 624 FRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPE---------PEWDNENDVVTGL 674
Query: 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 688
TC+ V+GIEDPVRPEVPEAIKKCQRAGIT+RMVTGDNINTAR+IATKCGI+ PGED+L L
Sbjct: 675 TCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPGEDFLCL 734
Query: 689 EGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAV 748
EGK+FNRR+R+ GE++Q +DK+WP+LRVLARSSP+DK+TLVKG+IDS +S R+VVAV
Sbjct: 735 EGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSEQRQVVAV 794
Query: 749 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISK 808
TGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISK
Sbjct: 795 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISK 854
Query: 809 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR 868
FLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT LLLR
Sbjct: 855 FLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLR 914
Query: 869 KPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTI 928
KPYGR K LIS+TMMKNI+G A YQLV++F +LF G+K DI +GR A + P++H+TI
Sbjct: 915 KPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTI 974
Query: 929 IFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATH 988
+FNTFVLM LFNEINARKIHG+RNVFEG+F N IF +I + T V Q+IIVQ+GG F+
Sbjct: 975 VFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCS 1034
Query: 989 SLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNT--------- 1039
L++EQW W +F G+GTL+W Q+++T+PT RL + G G + E
Sbjct: 1035 ELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAEDVEEID 1094
Query: 1040 ---RQQRAAHILWLRGLTRLQTQLRVIRAFKS 1068
R+ R ILW RGL R+QTQ+ V+ AF+S
Sbjct: 1095 HAERELRRGQILWFRGLNRIQTQMDVVNAFQS 1126
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1352 bits (3500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/1125 (61%), Positives = 851/1125 (75%), Gaps = 59/1125 (5%)
Query: 10 QYGITLRQLRELMEVRGREGIAKIN-EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G TL LR+LME+R + + +I+ YG V EIC +L TSP EGL G+ DLE RR VF
Sbjct: 21 EFGCTLMDLRKLMELRAADAVTQISAHYGSVQEICARLKTSPVEGLSGNPADLEKRRLVF 80
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP-GGESE---------H 118
G N+IPPK KTFL+LVWEALQDVTLIILEIAA++SL LSFY P GGE+E
Sbjct: 81 GKNMIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGGENEICGHIVSNPE 140
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
++EE + WIEGAAIL SVI+VV VTAFND+SKEKQFRGLQ++IE E KF++IR +L Q
Sbjct: 141 EDEEGETGWIEGAAILASVIIVVFVTAFNDWSKEKQFRGLQSRIELEQKFSIIRNGQLIQ 200
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
+ V +IVVGDI Q+KYGDLLPADGILIQ NDLKIDESSLTGESDHVKK DPM+LSGT
Sbjct: 201 LPVAEIVVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKTLDKDPMLLSGT 260
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVK-------QEKKDKKKKKRDEESAI 291
HVMEGSG+MVVTAVG+NSQ GIIFTLLGA ++E+ + Q + + K + ++
Sbjct: 261 HVMEGSGRMVVTAVGINSQTGIIFTLLGANEEEDDEKKKKGKKQGVSENRNKAKTQDGV- 319
Query: 292 EAIDMKPVEVAEKHD-------------EKKSVLQAKLTKLAIQIGYAGSTIAILTVVIL 338
A++++P+ E D ++KSVLQ KLT+LA+QIG AG ++ILTV+IL
Sbjct: 320 -ALEIQPLNSQEGLDSEEKEKKASKGPKKEKSVLQGKLTRLAVQIGKAGLIMSILTVLIL 378
Query: 339 ISQYCVKKFVIEDEEW----KAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVK 394
I + V FVI+ W +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVK
Sbjct: 379 ILYFVVDNFVIQRRAWLPECTPVYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVK 438
Query: 395 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454
KMMKDNNLVRHLDACETMGNATAICSDKTGTLT NRMT VQAY+ Y+ IPK +D+P
Sbjct: 439 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGGTHYRQIPKPDDLPP 498
Query: 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLP 514
++ IV I +NS YTSKI+ PE LP+QVGNKTEC LLGFV + ++YQ VR ++P
Sbjct: 499 NVLDLIVNSICINSAYTSKILPPEKEGGLPRQVGNKTECGLLGFVTDLKQDYQAVRSEMP 558
Query: 515 EEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDM 573
EE +VYTFNSVRKSMSTVI K + G+RV++KGASEI+L+KC I + G + F
Sbjct: 559 EEKLFKVYTFNSVRKSMSTVIRKPEGGFRVFSKGASEIMLRKCDRILNKEGGIVPFKTKD 618
Query: 574 QGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCV 633
+ +VRNVIEPMA +GLRTI IAY+DF + +P+W++E+ I + L C+ V
Sbjct: 619 RDNMVRNVIEPMASEGLRTIGIAYRDFDGE-----------EPSWENENEIFTGLVCIAV 667
Query: 634 IGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 693
+GIEDPVRPEVP+AI KC+RAGIT+RMVTGDN+NTAR+IATKCGI+ PG+D+L LEGKEF
Sbjct: 668 VGIEDPVRPEVPDAINKCKRAGITVRMVTGDNVNTARAIATKCGILTPGDDFLCLEGKEF 727
Query: 694 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 753
NR +R+ GEV+Q LDKVWPRLRVLARSSP+DK+TLVKG+IDS I R+VVAVTGDGT
Sbjct: 728 NRLIRNEKGEVEQEKLDKVWPRLRVLARSSPTDKHTLVKGIIDSNIGEQRQVVAVTGDGT 787
Query: 754 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQ 813
NDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQ
Sbjct: 788 NDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQ 847
Query: 814 LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873
LTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL R+PYGR
Sbjct: 848 LTVNVVAVIVAFSGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTDSLLRRRPYGR 907
Query: 874 TKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTF 933
K LIS+TMMKNI+G A+YQL I+F ++F GDKL DI +GR A S P+QH+TI+FNTF
Sbjct: 908 NKPLISRTMMKNILGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTF 967
Query: 934 VLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993
VLM LFNEIN+RKIHG++NVF G++ N IF S+ + T Q++IV+ GG F+ +LT+E
Sbjct: 968 VLMQLFNEINSRKIHGEKNVFAGVYRNIIFCSVVLGTFFCQILIVEVGGKPFSCTNLTME 1027
Query: 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNTR----------QQR 1043
QW WCLF G+G L+W Q+++ +PTK L + G G + E + + + R
Sbjct: 1028 QWMWCLFIGIGELLWGQVISAIPTKSLKFLKEAGHGSDKEEISKDAEGLEEIDHAEMELR 1087
Query: 1044 AAHILWLRGLTRLQTQLRVIRAFKSNLEDLEERRSAQSLRSARSQ 1088
ILW+RGL R+QTQ+RV++ F S + + + ++ S+ S +Q
Sbjct: 1088 RGQILWVRGLNRIQTQIRVVKVFHSFRDVIHKSKNQVSIHSFMTQ 1132
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1347 bits (3487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1062 (64%), Positives = 816/1062 (76%), Gaps = 65/1062 (6%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+G +L +LR LME+RG E + K+ E YGGV +CK+L TSP EGL G+QTDL+ R+E+FG
Sbjct: 24 FGCSLMELRSLMELRGTEAVVKLQEDYGGVEGLCKRLKTSPTEGLAGAQTDLDKRKEIFG 83
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESE-----------H 118
N+IPPK KTFLQLVWEALQDVTLIILEIAAL+SLGLSFYHP GE+
Sbjct: 84 KNLIPPKKPKTFLQLVWEALQDVTLIILEIAALISLGLSFYHPPGETGGESCGAAAGGVE 143
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E WIEGAAIL+SV+ VVLVTAFND+SKEKQFRGLQ++IE E KF V+R +++ Q
Sbjct: 144 DEGEADAGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFQVVRGSQVIQ 203
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
+ V DI+VGDI QIKYGDLLP+DG+LIQ NDLKIDESSLTGESDHVKK DPM+LSGT
Sbjct: 204 LPVADILVGDIAQIKYGDLLPSDGVLIQGNDLKIDESSLTGESDHVKKSADKDPMLLSGT 263
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGA--------------TDD--------EEVKQE 276
HVMEGSG+MVVTAVGVNSQ GIIFTLLGA +D ++ E
Sbjct: 264 HVMEGSGRMVVTAVGVNSQTGIIFTLLGAGVEEEEKKEKKGGAVEDGHQNTGKMQDGNME 323
Query: 277 KKDKKKKKRDEESAIEAIDMKPVEVAE--KHDEK-----------KSVLQAKLTKLAIQI 323
K KK+D +A+E M+P++ AE + DEK KSVLQ KLTKLA+QI
Sbjct: 324 SNQIKVKKQDGAAAME---MQPLKSAEGGEADEKERKKVSAPKKEKSVLQGKLTKLAVQI 380
Query: 324 GYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAIYFREFVRFFMVGVTVLVVAVPE 379
G AG ++ +TV+IL+ + + FV++ W IY + FV+FF++GVTVLVVAVPE
Sbjct: 381 GKAGLLMSAITVIILVLYFAIDNFVMQKRPWMPECTPIYIQYFVKFFIIGVTVLVVAVPE 440
Query: 380 GLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVC 439
GLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQ YV
Sbjct: 441 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQLYVG 500
Query: 440 EVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFV 499
+V+YK IP +P +V IS+NS YT+KI+ P+ LPKQVGNKTEC LLG V
Sbjct: 501 DVRYKEIPDPGVLPPKSLDLLVNAISINSAYTTKILPPDKEGGLPKQVGNKTECGLLGLV 560
Query: 500 VAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSY 558
+ + ++YQ +R+ +PEE +VYTFNSVRKSMSTVI +G +R+Y+KGASEI+LKKCS+
Sbjct: 561 LELKRDYQPIRNQIPEEKLYKVYTFNSVRKSMSTVIKLPDGSFRMYSKGASEIVLKKCSH 620
Query: 559 IYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNW 618
I G F + +V+ VIEPMACDGLRTI +AY+DF ++ +PNW
Sbjct: 621 ILNEVGEPRVFRPRDKDEMVKKVIEPMACDGLRTICVAYRDFSSNP----------EPNW 670
Query: 619 DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 678
DDE+NI++ LT +CV+GIEDPVRPEVP AI+KCQRAGIT+RMVTG NINTAR+IA KCGI
Sbjct: 671 DDENNILNDLTAICVVGIEDPVRPEVPNAIQKCQRAGITVRMVTGANINTARAIAIKCGI 730
Query: 679 VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSK 738
+ PGED+L ++GKEFNRR+R+ GEV+Q +DKVWP+LRVLARSSP+DK+TLVKG+IDS
Sbjct: 731 IHPGEDFLCIDGKEFNRRIRNEKGEVEQERIDKVWPKLRVLARSSPTDKHTLVKGIIDST 790
Query: 739 ISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798
++ R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMW
Sbjct: 791 MADQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 850
Query: 799 GRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALAT 858
GRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALAT
Sbjct: 851 GRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALAT 910
Query: 859 EMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEY 918
E PT LL RKPYGR K LIS TM KNI+G +YQL+IIF +LF G+++ DI +GR A
Sbjct: 911 EPPTESLLKRKPYGRNKPLISSTMTKNILGHGVYQLIIIFTLLFVGEQIFDIDSGRNAPL 970
Query: 919 GSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIV 978
S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G+F NPIF SI T Q++IV
Sbjct: 971 HSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVFGTFAVQIVIV 1030
Query: 979 QYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRL 1020
Q+GG F+ L LE+W WC+F G+G LVW Q++ T+P RL
Sbjct: 1031 QFGGKPFSCQPLDLEKWMWCVFLGLGELVWGQVIATIPNSRL 1072
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Oreochromis mossambicus (taxid: 8127) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1345 bits (3480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1112 (63%), Positives = 848/1112 (76%), Gaps = 66/1112 (5%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+GITL +LR LME+R + + KI E YG V IC KL TSPNEGL G+ DLE R VFG
Sbjct: 27 FGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERREAVFG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNE-------- 121
N IPPK KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P E DN
Sbjct: 87 KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP---PEGDNALCGEVSVG 143
Query: 122 ----ETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
E + WIEGAAIL+SV+ VVLVTAFND+SKEKQFRGLQ++IE E KF VIR ++
Sbjct: 144 EEEGEGETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVI 203
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DI VGDI Q+KYGDLLPADGILIQ NDLKIDESSLTGESDHVKK DP++LSG
Sbjct: 204 QIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPLLLSG 263
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIE----- 292
THVMEGSG+MVVTAVGVNSQ GIIFTLLGA +EE K+++K K+KK + ++ AIE
Sbjct: 264 THVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDEKKKEKKNKKQDGAIENRNKA 323
Query: 293 ------AIDMKPVEVAEKHD-------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
A++M+P++ E D ++KSVLQ KLTKLA+QIG AG ++ +
Sbjct: 324 KAQDGAAMEMQPLKSEEGGDGDEKDKKKANLPKKEKSVLQGKLTKLAVQIGKAGLLMSAI 383
Query: 334 TVVILISQYCVKKFVIEDEEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSL 389
TV+IL+ + + F ++ W A IY + FV+FF++GVTVLVVAVPEGLPLAVT+SL
Sbjct: 384 TVIILVLYFVIDTFWVQKRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISL 443
Query: 390 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY 449
AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT NRMT VQAY+ E YK +P+
Sbjct: 444 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEP 503
Query: 450 EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTV 509
E IP +I S +V GISVN YTSKI+ PE LP+ VGNKTECALLG ++ + ++YQ V
Sbjct: 504 EAIPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKTECALLGLLLDLKRDYQDV 563
Query: 510 RDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEK 568
R+++PEE +VYTFNSVRKSMSTV+ +G YR+++KGASEIILKKC I NG +
Sbjct: 564 RNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSYRIFSKGASEIILKKCFKILSANGEAKV 623
Query: 569 FTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL 628
F + +V+ VIEPMA +GLRTI +A++DF + E P WD+E++IV+ L
Sbjct: 624 FRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPE---------PEWDNENDIVTGL 674
Query: 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 688
TC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMVTGDNINTAR+IATKCGI+ PGED+L L
Sbjct: 675 TCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPGEDFLCL 734
Query: 689 EGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAV 748
EGK+FNRR+R+ GE++Q +DK+WP+LRVLARSSP+DK+TLVKG+IDS +S R+VVAV
Sbjct: 735 EGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSDQRQVVAV 794
Query: 749 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISK 808
TGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISK
Sbjct: 795 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISK 854
Query: 809 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR 868
FLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT LLLR
Sbjct: 855 FLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLR 914
Query: 869 KPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTI 928
KPYGR K LIS+TMMKNI+G A YQLV++F +LF G+K DI +GR A + P++H+TI
Sbjct: 915 KPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTI 974
Query: 929 IFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATH 988
+FNTFVLM LFNEINARKIHG+RNVFEG+F N IF +I + T V Q+IIVQ+GG F+
Sbjct: 975 VFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCS 1034
Query: 989 SLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNT--------- 1039
L++EQW W +F G+GTL+W Q+++T+PT RL + G G + E
Sbjct: 1035 ELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAEDVEEID 1094
Query: 1040 ---RQQRAAHILWLRGLTRLQTQLRVIRAFKS 1068
R+ R ILW RGL R+QTQ+ V+ AF+S
Sbjct: 1095 HAERELRRGQILWFRGLNRIQTQMDVVNAFQS 1126
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P23634|AT2B4_HUMAN Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1344 bits (3479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1110 (61%), Positives = 832/1110 (74%), Gaps = 59/1110 (5%)
Query: 5 DGRPTQYGITLRQLRELMEVRGREGIAKIN-EYGGVPEICKKLYTSPNEGLGGSQTDLEH 63
+ R +G T+ +LR+LME+R R+ + +IN YGGV +C +L TSP EGL G+ DLE
Sbjct: 16 ESREGDFGCTVMELRKLMELRSRDALTQINVHYGGVQNLCSRLKTSPVEGLSGNPADLEK 75
Query: 64 RREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE-------- 115
RR+VFG N+IPPK KTFL+LVWEALQDVTLIILEIAA++SL LSFY P GE
Sbjct: 76 RRQVFGHNVIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPAGEENELCGQV 135
Query: 116 --SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQ 173
+ D E + WIEGAAIL SVI+VVLVTAFND+SKEKQFRGLQ +IE E KF++IR
Sbjct: 136 ATTPEDENEAQAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQCRIEQEQKFSIIRN 195
Query: 174 NELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPM 233
+L Q+ V +IVVGDI Q+KYGDLLPADGILIQ NDLKIDESSLTGESDHVKK DPM
Sbjct: 196 GQLIQLPVAEIVVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPM 255
Query: 234 VLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVK-------QEKKDKKKKKRD 286
+LSGTHVMEGSG+MVVTAVGVNSQ GII TLLG +D+E + Q + + K +
Sbjct: 256 LLSGTHVMEGSGRMVVTAVGVNSQTGIILTLLGVNEDDEGEKKKKGKKQGVPENRNKAKT 315
Query: 287 EESAIEAIDMKPVEVAEKHD-------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
++ A++++P+ E D ++KSVLQ KLT+LA+QIG AG ++ L
Sbjct: 316 QDGV--ALEIQPLNSQEGIDNEEKDKKAVKVPKKEKSVLQGKLTRLAVQIGKAGLLMSAL 373
Query: 334 TVVILISQYCVKKFVIEDEEW----KAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSL 389
TV ILI + + FVI W IY + FV+FF++G+TVLVVAVPEGLPLAVT+SL
Sbjct: 374 TVFILILYFVIDNFVINRRPWLPECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISL 433
Query: 390 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY 449
AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT NRMT VQAY+ + Y+ IP
Sbjct: 434 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGGIHYRQIPSP 493
Query: 450 EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTV 509
+ + IV GIS+NS YTSKI+ PE LP+QVGNKTECALLGFV + ++YQ V
Sbjct: 494 DVFLPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYQAV 553
Query: 510 RDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEK 568
R+++PEE +VYTFNSVRKSMSTVI NG +R+Y+KGASEIIL+KC+ I R G
Sbjct: 554 RNEVPEEKLYKVYTFNSVRKSMSTVIRNPNGGFRMYSKGASEIILRKCNRILDRKGEAVP 613
Query: 569 FTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL 628
F + +VR VIEPMACDGLRTI IAY+DF D E P+WD+E+ I++ L
Sbjct: 614 FKNKDRDDMVRTVIEPMACDGLRTICIAYRDF--DDTE---------PSWDNENEILTEL 662
Query: 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 688
TC+ V+GIEDPVRPEVP+AI KC++AGIT+RMVTGDNINTAR+IATKCGI+ PG+D+L L
Sbjct: 663 TCIAVVGIEDPVRPEVPDAIAKCKQAGITVRMVTGDNINTARAIATKCGILTPGDDFLCL 722
Query: 689 EGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAV 748
EGKEFNR +R+ GEV+Q LDK+WP+LRVLARSSP+DK+TLVKG+IDS + R+VVAV
Sbjct: 723 EGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEHRQVVAV 782
Query: 749 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISK 808
TGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISK
Sbjct: 783 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISK 842
Query: 809 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR 868
FLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL R
Sbjct: 843 FLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKR 902
Query: 869 KPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTI 928
+PYGR K LIS+TMMKNI+G A YQL++IF ++F G+K DI +GR A S P+QH+TI
Sbjct: 903 RPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEKFFDIDSGRKAPLHSPPSQHYTI 962
Query: 929 IFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATH 988
+FNTFVLM LFNEIN+RKIHG++NVF G++ N IF S+ + T + Q+ IV++GG F+
Sbjct: 963 VFNTFVLMQLFNEINSRKIHGEKNVFSGIYRNIIFCSVVLGTFICQIFIVEFGGKPFSCT 1022
Query: 989 SLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNTR-------- 1040
SL+L QW WCLF G+G L+W Q ++ +PT+ L + G G + E +
Sbjct: 1023 SLSLSQWLWCLFIGIGELLWGQFISAIPTRSLKFLKEAGHGTTKEEITKDAEGLDEIDHA 1082
Query: 1041 --QQRAAHILWLRGLTRLQTQLRVIRAFKS 1068
+ R ILW RGL R+QTQ+ VI F++
Sbjct: 1083 EMELRRGQILWFRGLNRIQTQIDVINTFQT 1112
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1119 | ||||||
| 345479817 | 1259 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 0.983 | 0.874 | 0.744 | 0.0 | |
| 380018752 | 1189 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.929 | 0.728 | 0.0 | |
| 383859188 | 1172 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.942 | 0.746 | 0.0 | |
| 328724397 | 1170 | PREDICTED: plasma membrane calcium-trans | 0.991 | 0.947 | 0.738 | 0.0 | |
| 383859192 | 1176 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.939 | 0.744 | 0.0 | |
| 350411677 | 1193 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.926 | 0.724 | 0.0 | |
| 340729533 | 1193 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.926 | 0.725 | 0.0 | |
| 383859186 | 1194 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.925 | 0.731 | 0.0 | |
| 270015602 | 1217 | hypothetical protein TcasGA2_TC001467 [T | 0.983 | 0.904 | 0.738 | 0.0 | |
| 383859194 | 1199 | PREDICTED: plasma membrane calcium-trans | 0.987 | 0.921 | 0.729 | 0.0 |
| >gi|345479817|ref|XP_003424034.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane calcium-transporting ATPase 3-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1745 bits (4520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 859/1154 (74%), Positives = 975/1154 (84%), Gaps = 53/1154 (4%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYG+TL+QLRELME+RGREG+ K+N YGGV E+CKKLYTSP+EGL GS D
Sbjct: 1 MATIDGRPAQYGLTLKQLRELMELRGREGVTKLNTYGGVQEVCKKLYTSPSEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFL LVWEALQDVTLIILEIAALVSLGLSFYHP E+E
Sbjct: 61 IQHRRDTFGSNMIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYHPSDENEEGV 120
Query: 119 --DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNEL 176
+++E KY WIEG AIL+SVIVVVLVTAFNDYSKE+QFRGLQN+IEGEHKF+VIRQ E+
Sbjct: 121 LIEDDEAKYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGLQNRIEGEHKFSVIRQGEV 180
Query: 177 KQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLS 236
KQI V DIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGE FDPMVLS
Sbjct: 181 KQISVSDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGEAFDPMVLS 240
Query: 237 GTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDE------------------------- 271
GTHVMEGSGKM+VTAVGVNSQAGIIFTLLGA D+
Sbjct: 241 GTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLSGDE 300
Query: 272 --EVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGST 329
E+ K+ D E+ KP +K +KSVLQAKLTKLAIQIGYAGST
Sbjct: 301 AGEIGNSHAVSKQHSVDGENHHGGGTSKPEHEGKK---EKSVLQAKLTKLAIQIGYAGST 357
Query: 330 IAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSL 389
IA+LTV+IL+ Q+CV F I+ + WK Y E VR F++GVTVLVVAVPEGLPLAVTLSL
Sbjct: 358 IAVLTVIILVIQFCVTTFYIQGKIWKNTYAGELVRHFIIGVTVLVVAVPEGLPLAVTLSL 417
Query: 390 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY 449
AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT V +Y+CE K +P +
Sbjct: 418 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVNSYICEKLSKTVPNF 477
Query: 450 EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTV 509
DIP + +++ +S+NS YTS+IM ++ EL QVGNKTECALLGFV+A+GK+YQTV
Sbjct: 478 SDIPSHVGQLLIQAVSINSAYTSRIMPSQDPTELAMQVGNKTECALLGFVIALGKSYQTV 537
Query: 510 RDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEK 568
RDD PEE FTRVYTFNSVRKSMSTVIP++ G YR++TKGASEII+KKC++IYGR+G+LEK
Sbjct: 538 RDDNPEETFTRVYTFNSVRKSMSTVIPRQGGGYRLFTKGASEIIMKKCAFIYGRDGNLEK 597
Query: 569 FTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL 628
FT+DMQ RLV+NVIEPMACDGLRTISIAY+DFV KA+INQVHI+ +PNW+DE NIV++L
Sbjct: 598 FTRDMQDRLVKNVIEPMACDGLRTISIAYRDFVPGKADINQVHIDNEPNWEDEENIVANL 657
Query: 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 688
TCL ++GIEDPVRPEVP+AIKKCQ+AGIT+RMVTGDN+NTARSIA KCGI+KP ED+LIL
Sbjct: 658 TCLGIVGIEDPVRPEVPDAIKKCQKAGITVRMVTGDNVNTARSIALKCGILKPSEDFLIL 717
Query: 689 EGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAV 748
EGKEFN+R+RD++GEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK SA REVVAV
Sbjct: 718 EGKEFNKRIRDSHGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASANREVVAV 777
Query: 749 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISK 808
TGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+K
Sbjct: 778 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAK 837
Query: 809 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR 868
FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR
Sbjct: 838 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLR 897
Query: 869 KPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPT-GRGAEYGSLPTQHFT 927
KPYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDIP+ A G PTQHFT
Sbjct: 898 KPYGRTKPLISRTMMKNILGQAVYQLTVIFMLLFVGDKMLDIPSGRGVAAAGGGPTQHFT 957
Query: 928 IIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFAT 987
IIFNTFV+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW+ T +SQV I+QYG +AF+T
Sbjct: 958 IIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVFIIQYGKMAFST 1017
Query: 988 HSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN--------- 1038
+LTLEQW WCLFFG GTL+W Q+VTT+PT+++PKI SWGRGQP+ A+N
Sbjct: 1018 KALTLEQWMWCLFFGFGTLLWGQLVTTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPD 1077
Query: 1039 -TRQQRAAHILWLRGLTRLQTQLRVIRAFKSNLEDLEERRSAQSL------RSARSQLGN 1091
++ RA ILW+RGLTRLQTQLRVIRAF+S LEDLEERRS SL RS+RS G
Sbjct: 1078 SDKKPRAGQILWIRGLTRLQTQLRVIRAFRSTLEDLEERRSVHSLHSLHSMRSSRSHTG- 1136
Query: 1092 QRPLSDITYIDEDP 1105
RPLSD T+IDEDP
Sbjct: 1137 PRPLSDFTFIDEDP 1150
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 1736 bits (4497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1166 (72%), Positives = 973/1166 (83%), Gaps = 61/1166 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRPTQYGI+L+QLRELME+RGREG+ K+N YGGV EICKKLYTSP+EGL GS D
Sbjct: 1 MATIDGRPTQYGISLKQLRELMELRGREGVTKVNSYGGVQEICKKLYTSPSEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP + E
Sbjct: 61 IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPADDEEKPL 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D +E KY WIEGAAI +SVI+VV+VTA NDYSKEKQFRGLQ++IEGEHKF+VIRQ E+K
Sbjct: 121 IDEDEAKYGWIEGAAIFISVILVVIVTASNDYSKEKQFRGLQSRIEGEHKFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVADIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGESFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ--------EKKDKKKKKRDEE- 288
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ +K+ KKK DEE
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTDEEI 300
Query: 289 ---SAIEAIDMKP------VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILI 339
S + A +P V A + ++KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+
Sbjct: 301 TGNSHVSAAKPEPGENHHAVSHAAEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILV 360
Query: 340 SQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKD 399
Q+CV F ++ + WK Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKD
Sbjct: 361 IQFCVTTFYVQGKSWKNTYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKD 420
Query: 400 NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASK 459
NNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K P++ DIP + +
Sbjct: 421 NNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKITPQFSDIPSHVGNL 480
Query: 460 IVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFT 519
+V+ IS+NS YTS+IM + +LP QVGNKTECALLGFV+A+G NYQT+RDD PEE FT
Sbjct: 481 MVQAISINSAYTSRIMPAQEPTDLPLQVGNKTECALLGFVIALGMNYQTIRDDQPEETFT 540
Query: 520 RVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLV 578
RVYTFNSVRKSMST IP+K G YR++TKGASEII+KKC++IYGR GHLEKFTK+MQ RLV
Sbjct: 541 RVYTFNSVRKSMSTAIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTKEMQERLV 600
Query: 579 RNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIED 638
+NVIEPMACDGLRTI IAY+DFV KAEINQVHI+ +PNWDDE N+V++LTCLC++GIED
Sbjct: 601 KNVIEPMACDGLRTICIAYRDFVPGKAEINQVHIDNEPNWDDEENVVNNLTCLCIVGIED 660
Query: 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVR 698
PVRPEVPEAI+KCQ+AGIT+RMVTGDNINTARSIA KCGI+KP ED+LILEGKEFNRR+R
Sbjct: 661 PVRPEVPEAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNEDFLILEGKEFNRRIR 720
Query: 699 DNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 758
D++GEVQQ+LLDKVWPRLRVLARSSP+DKYTLVKG+IDSK SA REVVAVTGDGTNDGPA
Sbjct: 721 DSSGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASASREVVAVTGDGTNDGPA 780
Query: 759 LKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV 818
LKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVN+
Sbjct: 781 LKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNI 840
Query: 819 VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALI 878
VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK LI
Sbjct: 841 VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLI 900
Query: 879 SKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNTFVLMT 937
S+TMMKNI+GQAIYQL +IF +LF GDK+LDI TGRG A+ G PTQHFTIIFNTFV+MT
Sbjct: 901 SRTMMKNILGQAIYQLTVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTIIFNTFVMMT 960
Query: 938 LFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGW 997
LFNE NARKIHGQRNVF+G+FTNPIFY+IW++T +SQV+I+QYG +AF+T +LTLEQW W
Sbjct: 961 LFNEFNARKIHGQRNVFQGIFTNPIFYTIWIMTCLSQVVIIQYGKMAFSTKALTLEQWMW 1020
Query: 998 CLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQQRAAHI 1047
CLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ +A+N ++ RA I
Sbjct: 1021 CLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDISAINLGDEKFDPDSDKKPRAGQI 1080
Query: 1048 LWLRGLTRLQTQ-----------------------LRVIRAFKSNLED--LEERRS---A 1079
LW+RGLTRLQTQ +RV+ AF+ L+ E S A
Sbjct: 1081 LWIRGLTRLQTQVIGGELQERLIPVPYSKSSTDQAIRVVNAFRQGLDARYTSEHSSTTLA 1140
Query: 1080 QSLRSARSQLGNQRPLSDITYIDEDP 1105
+ LR S S I Y D +P
Sbjct: 1141 EVLRKQSSLSKRLSQTSSIEYADNNP 1166
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859188|ref|XP_003705078.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1736 bits (4495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1149 (74%), Positives = 976/1149 (84%), Gaps = 44/1149 (3%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS D
Sbjct: 1 MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP E E
Sbjct: 61 IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D++E KY WIEG AIL+SVIVVVLVTAFNDYSKE+QFRGLQ++IEGEHKF+VIRQ E+K
Sbjct: 121 IDDDEAKYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGLQSRIEGEHKFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVSDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ-------EKKDKKKKKRDEESA 290
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ KK +KKK + A
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTGDEA 300
Query: 291 IEAIDMKPVEVAEKHD-----------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
+E V KH+ ++KSVLQAKLTKLAIQIGYAGSTIA+L
Sbjct: 301 VEITGNSHVSGGGKHEGGENHHAASHGGGGEGKKEKSVLQAKLTKLAIQIGYAGSTIAVL 360
Query: 334 TVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV 393
TVVIL+ Q+CVK FVI+++ WK Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSV
Sbjct: 361 TVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSV 420
Query: 394 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIP 453
KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K IPK+ DIP
Sbjct: 421 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKTIPKFSDIP 480
Query: 454 EDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDL 513
+ + IV+ IS+NS YTS+IM ++ ELP QVGNKTECALLGFVVA+G NYQT+RDD
Sbjct: 481 SHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQ 540
Query: 514 PEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKD 572
PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++
Sbjct: 541 PEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTRE 600
Query: 573 MQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLC 632
MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEINQVHI+ +PNWDDE NIV++LTCLC
Sbjct: 601 MQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENIVNNLTCLC 660
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI+KP ED+LILEGKE
Sbjct: 661 IVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNEDFLILEGKE 720
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
FNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDG
Sbjct: 721 FNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDG 780
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 812
TNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQF
Sbjct: 781 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQF 840
Query: 813 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG 872
QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPDLLLR+PYG
Sbjct: 841 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPDLLLRRPYG 900
Query: 873 RTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFN 931
RTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFT+IFN
Sbjct: 901 RTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTVIFN 960
Query: 932 TFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLT 991
TFV+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW+ T +SQVII+QYG +AF+T +LT
Sbjct: 961 TFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKMAFSTKALT 1020
Query: 992 LEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQ 1041
LEQW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++
Sbjct: 1021 LEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKK 1080
Query: 1042 QRAAHILWLRGLTRLQTQLRVIRAFKSNLED--LEERRS---AQSLRSARSQLGNQRPLS 1096
R ILW+RGLTRLQTQ+RV+ AF+ L+ + E S A+ LR S S
Sbjct: 1081 PRTGQILWIRGLTRLQTQIRVVNAFRQGLDARYMSEHSSTNLAEVLRKQSSLSKRLSQTS 1140
Query: 1097 DITYIDEDP 1105
+I Y D +P
Sbjct: 1141 NIEYADNNP 1149
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328724397|ref|XP_003248135.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 3 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1734 bits (4490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 863/1168 (73%), Positives = 984/1168 (84%), Gaps = 59/1168 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYG+TL+QLRELME RGREGI K+NE GGV ++CKKLYTSP+EGL GS D
Sbjct: 1 MATIDGRPAQYGVTLKQLRELMEHRGREGIVKLNELGGVQDVCKKLYTSPSEGLSGSTAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESE--H 118
LEHR+E F SN IPPKP KTF+QLVWEALQDVTLIILEIAALVSLGLS Y P E
Sbjct: 61 LEHRKETFSSNTIPPKPPKTFMQLVWEALQDVTLIILEIAALVSLGLSLYKPADEESMSA 120
Query: 119 DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
+++E K+ WIEG AIL+SVIVVV+VTAFNDY+KE+QFRGLQN+IEGEH+F VIR EL+Q
Sbjct: 121 EDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQNRIEGEHRFNVIRHGELQQ 180
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I VG+IVVGDICQIKYGDLLPADG+LIQSNDLK+DESSLTGESDHVKKGE FDPMVLSGT
Sbjct: 181 ISVGEIVVGDICQIKYGDLLPADGVLIQSNDLKVDESSLTGESDHVKKGEQFDPMVLSGT 240
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKR--------DE--- 287
HVMEGSGKM+VTAVG+NSQAGIIFTLLGA D++ ++ KK +K+ K+ DE
Sbjct: 241 HVMEGSGKMLVTAVGINSQAGIIFTLLGAAVDQQEEEMKKQRKEAKKLKTKKSLTDEVPP 300
Query: 288 --ESAIEAIDMKPV------------------EVAEKHDEKKSVLQAKLTKLAIQIGYAG 327
S I MK + E E + KSVLQAKLTKLAIQIGYAG
Sbjct: 301 TINSHATDIGMKQMDKGGETDDDAAAGGGQSGESEEPAKKDKSVLQAKLTKLAIQIGYAG 360
Query: 328 STIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTL 387
STIA+LTV+IL+ Q+C+ FVI+ ++WK Y EFVR ++GVTVLVVAVPEGLPLAVTL
Sbjct: 361 STIAVLTVLILVIQFCIHTFVIQQKQWKNHYAGEFVRHLIIGVTVLVVAVPEGLPLAVTL 420
Query: 388 SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIP 447
SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CEV K +P
Sbjct: 421 SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEVLSKTMP 480
Query: 448 KYEDIPEDIASKIVEGISVNSGYTSKIMAPEN-ANELPKQVGNKTECALLGFVVAIGKNY 506
++ IP ++ + +V+ IS+NS YTSKIM P++ +ELPKQVGNKTECALLGF++A+GKNY
Sbjct: 481 QFASIPSNVGNLLVQAISINSAYTSKIMPPDDPTSELPKQVGNKTECALLGFILALGKNY 540
Query: 507 QTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGH 565
QT RDD+PEE+ TRVYTFNSVRKSMSTVIP++ G YR++TKGASEI+LKKCSYIYGR+G
Sbjct: 541 QTWRDDIPEEMLTRVYTFNSVRKSMSTVIPREGGGYRLFTKGASEIVLKKCSYIYGRDGR 600
Query: 566 LEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEI-NQVHIEGDPNWDDESNI 624
LEKFT++MQ RLVRNVIEPMA DGLRTIS+AYKDF+ K + NQVH EG+P+W+ E +I
Sbjct: 601 LEKFTREMQDRLVRNVIEPMASDGLRTISVAYKDFIPGKTDSPNQVHYEGEPDWESEDSI 660
Query: 625 VSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED 684
V LT LCV+GIEDPVRPEVPEAI+KCQRAGIT+RMVTGDN+NTARSIATKCGI K GED
Sbjct: 661 VCDLTALCVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNVNTARSIATKCGIYKTGED 720
Query: 685 YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGRE 744
+L+LEGKEFN+R+RD NG+VQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK+S RE
Sbjct: 721 WLVLEGKEFNQRIRDANGDVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKVSDSRE 780
Query: 745 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 804
VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 781 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 840
Query: 805 SISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 864
SI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PT D
Sbjct: 841 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTSD 900
Query: 865 LLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQ 924
LLLRKPYGRTK LIS+TMMKNIIGQA+YQL +IF +LF GDK+LDIPTGRGAE+GS PTQ
Sbjct: 901 LLLRKPYGRTKPLISRTMMKNIIGQAVYQLTVIFSLLFAGDKMLDIPTGRGAEFGSEPTQ 960
Query: 925 HFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIA 984
HFT+IFNTFV+MTLFNEINARKIHGQRNVF+G FTNPIFYSIW+ T++SQV I+QYG A
Sbjct: 961 HFTVIFNTFVMMTLFNEINARKIHGQRNVFQGFFTNPIFYSIWIGTVLSQVFIIQYGKDA 1020
Query: 985 FATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEA-AMNTRQQ- 1042
F+T SLTLEQW WCL FG GTL+W QIVTTVPT+++PK+ SWGRG PE A+N ++
Sbjct: 1021 FSTKSLTLEQWMWCLLFGFGTLLWGQIVTTVPTRKIPKLLSWGRGHPEEYTNAINLGEEN 1080
Query: 1043 ----------RAAHILWLRGLTRLQTQLRVIRAFKSNLEDLEERRSAQSLRSARSQLGNQ 1092
RA ILW+RGLTRLQTQLRVIRAFKS LEDLEERRS S R+ S G
Sbjct: 1081 RYDPDSGQKPRAGQILWIRGLTRLQTQLRVIRAFKSTLEDLEERRSIHSFRTTTSSRG-- 1138
Query: 1093 RPLSD-ITYIDEDPIKTPNEHYNNHQTS 1119
RPLSD ITYIDE+ +N+HQ +
Sbjct: 1139 RPLSDNITYIDEE--------HNHHQAA 1158
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859192|ref|XP_003705080.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 4 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1729 bits (4478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1153 (74%), Positives = 976/1153 (84%), Gaps = 48/1153 (4%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS D
Sbjct: 1 MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP E E
Sbjct: 61 IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D++E KY WIEG AIL+SVIVVVLVTAFNDYSKE+QFRGLQ++IEGEHKF+VIRQ E+K
Sbjct: 121 IDDDEAKYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGLQSRIEGEHKFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVSDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ-------EKKDKKKKKRDEESA 290
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ KK +KKK + A
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTGDEA 300
Query: 291 IEAIDMKPVEVAEKHD-----------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
+E V KH+ ++KSVLQAKLTKLAIQIGYAGSTIA+L
Sbjct: 301 VEITGNSHVSGGGKHEGGENHHAASHGGGGEGKKEKSVLQAKLTKLAIQIGYAGSTIAVL 360
Query: 334 TVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV 393
TVVIL+ Q+CVK FVI+++ WK Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSV
Sbjct: 361 TVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSV 420
Query: 394 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIP 453
KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K IPK+ DIP
Sbjct: 421 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKTIPKFSDIP 480
Query: 454 EDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDL 513
+ + IV+ IS+NS YTS+IM ++ ELP QVGNKTECALLGFVVA+G NYQT+RDD
Sbjct: 481 SHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQ 540
Query: 514 PEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKD 572
PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++
Sbjct: 541 PEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTRE 600
Query: 573 MQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLC 632
MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEINQVHI+ +PNWDDE NIV++LTCLC
Sbjct: 601 MQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENIVNNLTCLC 660
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI+KP ED+LILEGKE
Sbjct: 661 IVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNEDFLILEGKE 720
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
FNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDG
Sbjct: 721 FNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDG 780
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 812
TNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQF
Sbjct: 781 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQF 840
Query: 813 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG 872
QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPDLLLR+PYG
Sbjct: 841 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPDLLLRRPYG 900
Query: 873 RTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFN 931
RTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFT+IFN
Sbjct: 901 RTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTVIFN 960
Query: 932 TFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLT 991
TFV+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW+ T +SQVII+QYG +AF+T +LT
Sbjct: 961 TFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKMAFSTKALT 1020
Query: 992 LEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQ 1041
LEQW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++
Sbjct: 1021 LEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKK 1080
Query: 1042 QRAAHILWLRGLTRLQTQ----LRVIRAFKSNLED--LEERRS---AQSLRSARSQLGNQ 1092
R ILW+RGLTRLQTQ +RV+ AF+ L+ + E S A+ LR S
Sbjct: 1081 PRTGQILWIRGLTRLQTQIHMPIRVVNAFRQGLDARYMSEHSSTNLAEVLRKQSSLSKRL 1140
Query: 1093 RPLSDITYIDEDP 1105
S+I Y D +P
Sbjct: 1141 SQTSNIEYADNNP 1153
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350411677|ref|XP_003489420.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1727 bits (4474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1170 (72%), Positives = 967/1170 (82%), Gaps = 65/1170 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRPTQYGITL+QLRELME+RGREG+ KI+ YGGV EICKKLYTSP+EGL GS D
Sbjct: 1 MATIDGRPTQYGITLKQLRELMELRGREGVNKISSYGGVQEICKKLYTSPSEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFY P + E
Sbjct: 61 IQHRRDTFGSNQIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYQPADDEERPL 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D +E+KY WIEGAAI VSVI+VV+VTA NDYSKEKQFRGLQ++IEGEH+F+VIRQ E+K
Sbjct: 121 IDEDESKYGWIEGAAIFVSVILVVIVTASNDYSKEKQFRGLQSRIEGEHRFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVTDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGESFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ--------EKKDKKKKKRDEES 289
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ +K+ KKK DE
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTDEAG 300
Query: 290 AIEA---IDMKPVEVAEKHD-----------EKKSVLQAKLTKLAIQIGYAGSTIAILTV 335
I + E E H ++KSVLQAKLTKLAIQIGYAGSTIA+LTV
Sbjct: 301 EITGNSHVSGGKHEAGENHHAASHAGGAEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 360
Query: 336 VILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKK 395
+IL+ Q+CV FVIE + WK +Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSVKK
Sbjct: 361 IILVIQFCVTTFVIEGKPWKNMYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKK 420
Query: 396 MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPED 455
MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K +P++ +IP
Sbjct: 421 MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKKVPEFSEIPSH 480
Query: 456 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPE 515
I + I++ I+VNS YTS+IM P+ ELP QVGNKTECALLGFVVA+G NYQT+RDD PE
Sbjct: 481 IGNLIIQAIAVNSAYTSRIMPPQEPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQPE 540
Query: 516 EVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQ 574
E FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++MQ
Sbjct: 541 ETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTREMQ 600
Query: 575 GRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVI 634
RLV+NVIEPMACDGLRTI +AY+DFV KAEINQVHI+ DPNW+DE N+V++LTCLC++
Sbjct: 601 ERLVKNVIEPMACDGLRTICVAYRDFVPGKAEINQVHIDNDPNWEDEENVVNNLTCLCIV 660
Query: 635 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 694
GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI KP ED+LILEGKEFN
Sbjct: 661 GIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGIFKPNEDFLILEGKEFN 720
Query: 695 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN 754
RR+RD NGEVQQ+LLDKVWPRLRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDGTN
Sbjct: 721 RRIRDANGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDGTN 780
Query: 755 DGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 814
DGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQL
Sbjct: 781 DGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQL 840
Query: 815 TVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRT 874
TVN+VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT DLLLRKPYGRT
Sbjct: 841 TVNIVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTSDLLLRKPYGRT 900
Query: 875 KALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNTF 933
K LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFTIIFNTF
Sbjct: 901 KPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTIIFNTF 960
Query: 934 VLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993
V+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW++T ++QVII+QYG +AF+T +LTLE
Sbjct: 961 VMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIMTCLAQVIIIQYGKMAFSTKALTLE 1020
Query: 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQQR 1043
QW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++ R
Sbjct: 1021 QWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKKPR 1080
Query: 1044 AAHILWLRGLTRLQTQ-----------------------LRVIRAFKSNLE-----DLEE 1075
A ILW+RGLTRLQTQ +RV+ AF+ L+ +
Sbjct: 1081 AGQILWIRGLTRLQTQVIGGELQERLIPVPYSKSSTDQAIRVVNAFRQGLDARYTSEHST 1140
Query: 1076 RRSAQSLRSARSQLGNQRPLSDITYIDEDP 1105
A+ LR S S I Y D +P
Sbjct: 1141 TTLAEVLRKQSSLSKRLSQTSSIEYADNNP 1170
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340729533|ref|XP_003403055.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 1727 bits (4472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1170 (72%), Positives = 967/1170 (82%), Gaps = 65/1170 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRPTQYGITL+QLRELME+RGREG+ KI+ YGGV EICKKLYTSP+EGL GS D
Sbjct: 1 MATIDGRPTQYGITLKQLRELMELRGREGVNKISSYGGVQEICKKLYTSPSEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFY P + E
Sbjct: 61 IQHRRDTFGSNQIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYQPADDEERPL 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D +E+KY WIEGAAI VSVI+VV+VTA NDYSKEKQFRGLQ++IEGEH+F+VIRQ E+K
Sbjct: 121 IDEDESKYGWIEGAAIFVSVILVVIVTASNDYSKEKQFRGLQSRIEGEHRFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVTDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGESFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ--------EKKDKKKKKRDEES 289
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ +K+ KKK DE
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTDEAG 300
Query: 290 AIEA---IDMKPVEVAEKHD-----------EKKSVLQAKLTKLAIQIGYAGSTIAILTV 335
I + E E H ++KSVLQAKLTKLAIQIGYAGSTIA+LTV
Sbjct: 301 EITGNSHVSGGKHEAGENHHAASHAGGAEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLTV 360
Query: 336 VILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKK 395
+IL+ Q+CV FVIE + WK +Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSVKK
Sbjct: 361 IILVIQFCVTTFVIEGKPWKNMYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKK 420
Query: 396 MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPED 455
MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K +P++ +IP
Sbjct: 421 MMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKKVPEFSEIPSH 480
Query: 456 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPE 515
I + I++ I+VNS YTS+IM P+ ELP QVGNKTECALLGFVVA+G NYQT+RDD PE
Sbjct: 481 IGNLIIQAIAVNSAYTSRIMPPQEPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQPE 540
Query: 516 EVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQ 574
E FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++MQ
Sbjct: 541 ETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTREMQ 600
Query: 575 GRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVI 634
RLV+NVIEPMACDGLRTI +AY+DFV KAEINQVHI+ DPNW+DE NIV++LTCLC++
Sbjct: 601 ERLVKNVIEPMACDGLRTICVAYRDFVPGKAEINQVHIDNDPNWEDEENIVNNLTCLCIV 660
Query: 635 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 694
GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI KP ED+LILEGKEFN
Sbjct: 661 GIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGIFKPNEDFLILEGKEFN 720
Query: 695 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN 754
RR+RD NGEVQQ+LLDKVWPRLRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDGTN
Sbjct: 721 RRIRDANGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDGTN 780
Query: 755 DGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 814
DGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQL
Sbjct: 781 DGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQL 840
Query: 815 TVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRT 874
TVN+VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT DLLLRKPYGRT
Sbjct: 841 TVNIVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTSDLLLRKPYGRT 900
Query: 875 KALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNTF 933
K LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFTIIFNTF
Sbjct: 901 KPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQTGGGPTQHFTIIFNTF 960
Query: 934 VLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993
V+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW++T ++QVII+QYG +AF+T +LTLE
Sbjct: 961 VMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIMTCLAQVIIIQYGKMAFSTKALTLE 1020
Query: 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQQR 1043
QW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++ R
Sbjct: 1021 QWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKKPR 1080
Query: 1044 AAHILWLRGLTRLQTQ-----------------------LRVIRAFKSNLE-----DLEE 1075
A ILW+RGLTRLQTQ +RV+ AF+ L+ +
Sbjct: 1081 AGQILWIRGLTRLQTQVIGGELQERLIPVPYSKSSTDQAIRVVNAFRQGLDARYTSEHST 1140
Query: 1076 RRSAQSLRSARSQLGNQRPLSDITYIDEDP 1105
A+ LR S S I Y D +P
Sbjct: 1141 TTLAEVLRKQSSLSKRLSQTSSIEYADNNP 1170
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859186|ref|XP_003705077.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1721 bits (4457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/1171 (73%), Positives = 977/1171 (83%), Gaps = 66/1171 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS D
Sbjct: 1 MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP E E
Sbjct: 61 IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D++E KY WIEG AIL+SVIVVVLVTAFNDYSKE+QFRGLQ++IEGEHKF+VIRQ E+K
Sbjct: 121 IDDDEAKYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGLQSRIEGEHKFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVSDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ------EKKDKKKKKRDEESAI 291
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ E K ++KKK + A+
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTDEAV 300
Query: 292 EAIDMKPVEVAEKHD-----------------EKKSVLQAKLTKLAIQIGYAGSTIAILT 334
E V KH+ ++KSVLQAKLTKLAIQIGYAGSTIA+LT
Sbjct: 301 EITGNSHVSGGGKHEGGENHHAASHGGGGEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLT 360
Query: 335 VVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVK 394
VVIL+ Q+CVK FVI+++ WK Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSVK
Sbjct: 361 VVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVK 420
Query: 395 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454
KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K IPK+ DIP
Sbjct: 421 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKTIPKFSDIPS 480
Query: 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLP 514
+ + IV+ IS+NS YTS+IM ++ ELP QVGNKTECALLGFVVA+G NYQT+RDD P
Sbjct: 481 HVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQP 540
Query: 515 EEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDM 573
EE FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++M
Sbjct: 541 EETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTREM 600
Query: 574 QGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCV 633
Q RLV+NVIEPMACDGLRTIS+AY+DFV KAEINQVHI+ +PNWDDE NIV++LTCLC+
Sbjct: 601 QERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENIVNNLTCLCI 660
Query: 634 IGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 693
+GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI+KP ED+LILEGKEF
Sbjct: 661 VGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNEDFLILEGKEF 720
Query: 694 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 753
NRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDGT
Sbjct: 721 NRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDGT 780
Query: 754 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQ 813
NDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQ
Sbjct: 781 NDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQ 840
Query: 814 LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873
LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPDLLLR+PYGR
Sbjct: 841 LTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPDLLLRRPYGR 900
Query: 874 TKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNT 932
TK LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFT+IFNT
Sbjct: 901 TKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTVIFNT 960
Query: 933 FVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTL 992
FV+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW+ T +SQV+I+QYG +AF+T +LTL
Sbjct: 961 FVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVVIIQYGKMAFSTKALTL 1020
Query: 993 EQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQQ 1042
EQW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++
Sbjct: 1021 EQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKKP 1080
Query: 1043 RAAHILWLRGLTRLQTQ-----------------------LRVIRAFKSNLED--LEERR 1077
R ILW+RGLTRLQTQ +RV+ AF+ L+ + E
Sbjct: 1081 RTGQILWIRGLTRLQTQVIGGELQERLIPVPYSKSSTDQAIRVVNAFRQGLDARYMSEHS 1140
Query: 1078 S---AQSLRSARSQLGNQRPLSDITYIDEDP 1105
S A+ LR S S+I Y D +P
Sbjct: 1141 STNLAEVLRKQSSLSKRLSQTSNIEYADNNP 1171
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270015602|gb|EFA12050.1| hypothetical protein TcasGA2_TC001467 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 1721 bits (4457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 859/1163 (73%), Positives = 980/1163 (84%), Gaps = 62/1163 (5%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYGITL+QLR+LME RGREG+ KI ++GGV EICKKLYTSP+EGL GSQ D
Sbjct: 1 MATIDGRPAQYGITLKQLRDLMEHRGREGVNKIADFGGVQEICKKLYTSPSEGLSGSQVD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES-EHD 119
LEHRRE FGSN IPPKP KTFLQLVWEALQD+TLIILE+AA+VSLGLSFY P E D
Sbjct: 61 LEHRRETFGSNSIPPKPPKTFLQLVWEALQDITLIILEVAAIVSLGLSFYQPQQEDVPFD 120
Query: 120 NEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQI 179
++ET + WIEG AIL+SVIVVVLVTAFNDY+KE+QFRGLQ++IEGEHKFAVIRQ E+KQ+
Sbjct: 121 DDETSHGWIEGLAILISVIVVVLVTAFNDYTKERQFRGLQSRIEGEHKFAVIRQAEVKQV 180
Query: 180 FVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTH 239
V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE +DPMVLSGTH
Sbjct: 181 SVSDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGENYDPMVLSGTH 240
Query: 240 VMEGSGKMVVTAVGVNSQAGIIFTLLGAT---------------------------DDEE 272
VMEGSGKM+VTAVGVNSQAGIIFTLLGA DDE
Sbjct: 241 VMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKKQRKKKSLTGADDEN 300
Query: 273 VKQE----------KKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQ 322
V K + K+ +E+ + + P AE H ++KSVLQAKLTKLAIQ
Sbjct: 301 VTGNSHMNSPAPVPNKLNESKQESKENHVSS----PPASAESHKKEKSVLQAKLTKLAIQ 356
Query: 323 IGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLP 382
IGYAGSTIA+LTVVILI Q+CVK +V+E W+ + VR ++GVTVLVVAVPEGLP
Sbjct: 357 IGYAGSTIAVLTVVILIIQFCVKTYVVEGNSWQKNHASHLVRHLIIGVTVLVVAVPEGLP 416
Query: 383 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ 442
LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE
Sbjct: 417 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEQL 476
Query: 443 YKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAI 502
K++PK+ DIP + + I++GI+VN YTS++M P++ +LPKQVGNKTECALLGFV+ +
Sbjct: 477 CKSMPKFSDIPAHVGNAILQGIAVNCAYTSRVMPPDDPTDLPKQVGNKTECALLGFVLGL 536
Query: 503 GKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYG 561
GKNYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+ G YR+YTKGASE+IL KC++IYG
Sbjct: 537 GKNYQTIRDDYPEESFTRVYTFNSVRKSMSTVIPRAGGGYRLYTKGASEMILNKCAFIYG 596
Query: 562 RNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDE 621
+G LEKFT+DMQ RL++ VIEPMACDGLRTI IA+++FV KAEINQVHIE +PNWDDE
Sbjct: 597 HDGRLEKFTRDMQERLLKQVIEPMACDGLRTICIAFREFVPGKAEINQVHIENEPNWDDE 656
Query: 622 SNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP 681
NIV++LTCLCV+GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDN+NTARSIATKCGIVKP
Sbjct: 657 DNIVNNLTCLCVVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNLNTARSIATKCGIVKP 716
Query: 682 GEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 741
ED+LI+EGKEFNRR+RD+ GEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK++
Sbjct: 717 NEDFLIIEGKEFNRRIRDSTGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKVNE 776
Query: 742 GREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRN 801
REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRN
Sbjct: 777 NREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRN 836
Query: 802 VYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMP 861
VYDSI+KFLQFQLTVNVVAV+VAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+P
Sbjct: 837 VYDSIAKFLQFQLTVNVVAVVVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELP 896
Query: 862 TPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSL 921
T DLLLRKPYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDKLLDI +GRG + G+
Sbjct: 897 TNDLLLRKPYGRTKPLISRTMMKNILGQAVYQLTVIFALLFVGDKLLDIESGRGTDLGAG 956
Query: 922 PTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYG 981
PTQHFT+IFN+FV+MTLFNE NARKIHGQRNVFEG+FTNPIFY+IW+ T VSQ++I+QYG
Sbjct: 957 PTQHFTVIFNSFVMMTLFNEFNARKIHGQRNVFEGIFTNPIFYTIWIGTCVSQILIIQYG 1016
Query: 982 GIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPE--SEAAM-- 1037
+AFAT SLTLEQW WCLFFG+GTL+W Q+VTTVPT+++PKI SWGRG PE +EA
Sbjct: 1017 KMAFATKSLTLEQWLWCLFFGLGTLLWGQLVTTVPTRKIPKILSWGRGHPEEYTEAIAIG 1076
Query: 1038 -------NTRQQRAAHILWLRGLTRLQTQLRVIRAFKSNLEDLEERRSAQSLRSARSQLG 1090
+ ++ RA ILW+RGLTRLQTQLRVIRAFKS LEDLEERRS SL S S
Sbjct: 1077 EEKFDVDSDKKPRAGQILWIRGLTRLQTQLRVIRAFKSTLEDLEERRSVHSLHSLHSLRS 1136
Query: 1091 NQ--------RPLSDITYIDEDP 1105
++ RPLSDITYIDEDP
Sbjct: 1137 SRSHTGPWPPRPLSDITYIDEDP 1159
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859194|ref|XP_003705081.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 5 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1720 bits (4455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1176 (72%), Positives = 976/1176 (82%), Gaps = 71/1176 (6%)
Query: 1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS D
Sbjct: 1 MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60
Query: 61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP E E
Sbjct: 61 IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120
Query: 119 -DNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELK 177
D++E KY WIEG AIL+SVIVVVLVTAFNDYSKE+QFRGLQ++IEGEHKF+VIRQ E+K
Sbjct: 121 IDDDEAKYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGLQSRIEGEHKFSVIRQGEVK 180
Query: 178 QIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSG 237
QI V DIVVGDICQIKYGDLLPADGILIQSNDLK+DESSLTGESDHVKKGE FDPMVLSG
Sbjct: 181 QISVSDIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSG 240
Query: 238 THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ-------EKKDKKKKKRDEESA 290
THVMEGSGKM+VTAVGVNSQAGIIFTLLGA D++ ++ KK +KKK + A
Sbjct: 241 THVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDQQEQEIKKMKKEAKKQRKKKSLTGDEA 300
Query: 291 IEAIDMKPVEVAEKHD-----------------EKKSVLQAKLTKLAIQIGYAGSTIAIL 333
+E V KH+ ++KSVLQAKLTKLAIQIGYAGSTIA+L
Sbjct: 301 VEITGNSHVSGGGKHEGGENHHAASHGGGGEGKKEKSVLQAKLTKLAIQIGYAGSTIAVL 360
Query: 334 TVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV 393
TVVIL+ Q+CVK FVI+++ WK Y + VR ++GVTVLVVAVPEGLPLAVTLSLAYSV
Sbjct: 361 TVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSV 420
Query: 394 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIP 453
KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT VQ+Y+CE K IPK+ DIP
Sbjct: 421 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKMSKTIPKFSDIP 480
Query: 454 EDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDL 513
+ + IV+ IS+NS YTS+IM ++ ELP QVGNKTECALLGFVVA+G NYQT+RDD
Sbjct: 481 SHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGNKTECALLGFVVALGMNYQTIRDDQ 540
Query: 514 PEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKD 572
PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGASEII+KKC++IYGR GHLEKFT++
Sbjct: 541 PEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTRE 600
Query: 573 MQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLC 632
MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEINQVHI+ +PNWDDE NIV++LTCLC
Sbjct: 601 MQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENIVNNLTCLC 660
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINTARSIA KCGI+KP ED+LILEGKE
Sbjct: 661 IVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNEDFLILEGKE 720
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
FNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKYTLVKG+IDSK S REVVAVTGDG
Sbjct: 721 FNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDG 780
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 812
TNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQF
Sbjct: 781 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQF 840
Query: 813 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG 872
QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPDLLLR+PYG
Sbjct: 841 QLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPDLLLRRPYG 900
Query: 873 RTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFN 931
RTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+LDI TGRG A+ G PTQHFT+IFN
Sbjct: 901 RTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPTQHFTVIFN 960
Query: 932 TFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLT 991
TFV+MTLFNE NARKIHGQRNVF+G+FTNPIFYSIW+ T +SQVII+QYG +AF+T +LT
Sbjct: 961 TFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKMAFSTKALT 1020
Query: 992 LEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMN----------TRQ 1041
LEQW WCLFFGVGTL+W Q++TT+PT+++PKI SWGRGQP+ A+N ++
Sbjct: 1021 LEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIGAINLGDEKFDPDSDKK 1080
Query: 1042 QRAAHILWLRGLTRLQTQ---------------------------LRVIRAFKSNLED-- 1072
R ILW+RGLTRLQTQ +RV+ AF+ L+
Sbjct: 1081 PRTGQILWIRGLTRLQTQIHMPVIGGELQERLIPVPYSKSSTDQAIRVVNAFRQGLDARY 1140
Query: 1073 LEERRS---AQSLRSARSQLGNQRPLSDITYIDEDP 1105
+ E S A+ LR S S+I Y D +P
Sbjct: 1141 MSEHSSTNLAEVLRKQSSLSKRLSQTSNIEYADNNP 1176
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1119 | ||||||
| MGI|MGI:105368 | 1198 | Atp2b2 "ATPase, Ca++ transport | 0.943 | 0.881 | 0.615 | 0.0 | |
| UNIPROTKB|F1MS16 | 1206 | ATP2B3 "Uncharacterized protei | 0.942 | 0.874 | 0.612 | 0.0 | |
| UNIPROTKB|K7GRJ7 | 1206 | LOC100520061 "Uncharacterized | 0.942 | 0.874 | 0.613 | 0.0 | |
| UNIPROTKB|F1MQ01 | 1028 | ATP2B4 "Uncharacterized protei | 0.867 | 0.944 | 0.649 | 0.0 | |
| WB|WBGene00019875 | 1158 | mca-2 [Caenorhabditis elegans | 0.912 | 0.881 | 0.612 | 0.0 | |
| UNIPROTKB|D4A1Z6 | 1157 | Atp2b4 "Plasma membrane calciu | 0.905 | 0.875 | 0.631 | 0.0 | |
| UNIPROTKB|F1MN60 | 1198 | ATP2B2 "Uncharacterized protei | 0.943 | 0.881 | 0.584 | 0.0 | |
| FB|FBgn0259214 | 1255 | PMCA "plasma membrane calcium | 0.689 | 0.614 | 0.748 | 0.0 | |
| ZFIN|ZDB-GENE-061027-60 | 1174 | atp2b4 "ATPase, Ca++ transport | 0.652 | 0.621 | 0.663 | 0.0 | |
| UNIPROTKB|F1N7J2 | 1220 | ATP2B1 "Uncharacterized protei | 0.689 | 0.632 | 0.635 | 0.0 |
| MGI|MGI:105368 Atp2b2 "ATPase, Ca++ transporting, plasma membrane 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 3328 (1176.6 bits), Expect = 0., P = 0.
Identities = 677/1100 (61%), Positives = 808/1100 (73%)
Query: 10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G T+ +LR LME+RG E + KI E YG IC++L TSP EGL G+ DLE R+++F
Sbjct: 23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH---------- 118
G N IPPK KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGESNEGCATAQGGAE 142
Query: 119 DNEETKYEWIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E + WIEGAA TAFND+SKEKQFRGLQ++IE E KF V+R ++ Q
Sbjct: 143 DEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQ 202
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I V +IVVGDI QIKYGDLLPADG+ IQ NDLKIDESSLTGESD V+K DPM+LSGT
Sbjct: 203 IPVAEIVVGDIAQIKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGT 262
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATXXXXXXXXXXXXXXXXXXXXS-----AIEA 293
HVMEGSG+MVVTAVGVNSQ GIIFTLLGA + E
Sbjct: 263 HVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKQQDGAAAMEMQPLKSAEG 322
Query: 294 IDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEE 353
D + A H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ +
Sbjct: 323 GDADDKKKANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKP 382
Query: 354 WKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDAC 409
W +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDAC
Sbjct: 383 WLTECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDAC 442
Query: 410 ETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSG 469
ETMGNATAICSDKTGTLTTNRMT VQAYV +V YK IP I +V I++NS
Sbjct: 443 ETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLVNAIAINSA 502
Query: 470 YTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRK 529
YT+KI+ PE LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRK
Sbjct: 503 YTTKILPPEKEGALPRQVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYTFNSVRK 562
Query: 530 SMSTVIPKKN-GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACD 588
SMSTVI + +R+Y+KGASEI+LKKC I G F + +V+ VIEPMACD
Sbjct: 563 SMSTVIKMPDESFRMYSKGASEIVLKKCCKILSGAGEARVFRPRDRDEMVKKVIEPMACD 622
Query: 589 GLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAI 648
GLRTI +AY+DF + +P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI
Sbjct: 623 GLRTICVAYRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAI 672
Query: 649 KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 708
+KCQRAGIT+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q
Sbjct: 673 RKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQER 732
Query: 709 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768
+DK+WP+LRVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAM
Sbjct: 733 IDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAM 792
Query: 769 GITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 828
GI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GA
Sbjct: 793 GIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGA 852
Query: 829 CAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIG 888
C QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G
Sbjct: 853 CITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILG 912
Query: 889 QAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIH 948
A+YQL +IF +LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIH
Sbjct: 913 HAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIH 972
Query: 949 GQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVW 1008
G+RNVF+G+F NPIF +I + T Q++IVQ+GG F+ L L+QW WC+F G+G LVW
Sbjct: 973 GERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVW 1032
Query: 1009 QQIVTTVPTKRLPKIFSWGR-GQPES--EAAMNT---------RQQRAAHIXXXXXXXXX 1056
Q++ T+PT RL + GR Q E E +N R+ R I
Sbjct: 1033 GQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEEIDHAERELRRGQILWFRGLNRI 1092
Query: 1057 XXXXXVIRAFKSNL-EDLEE 1075
V++AF+S+L E LE+
Sbjct: 1093 QTQIRVVKAFRSSLYEGLEK 1112
|
|
| UNIPROTKB|F1MS16 ATP2B3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 3319 (1173.4 bits), Expect = 0., P = 0.
Identities = 674/1101 (61%), Positives = 812/1101 (73%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+G TL +LR LME+RG E + K+ E YG V +C++L TSP EGL + DLE RR+++G
Sbjct: 27 FGCTLAELRSLMELRGAEALQKVQEAYGDVSGLCRRLKTSPTEGLADNANDLEKRRQIYG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE-SE---------HD 119
N IPPK KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE SE D
Sbjct: 87 QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSAGAED 146
Query: 120 NEETKYEWIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQI 179
E + WIEGAA TAFND+SKEKQFRGLQ++IE E KF VIR +L Q+
Sbjct: 147 EGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQV 206
Query: 180 FVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTH 239
V +VVGDI Q+KYGDLLPADG+LIQ NDLKIDESSLTGESDHV+K DPM+LSGTH
Sbjct: 207 PVATLVVGDIAQVKYGDLLPADGVLIQGNDLKIDESSLTGESDHVRKSTDKDPMLLSGTH 266
Query: 240 VMEGSGKMVVTAVGVNSQAGIIFTLLGA--TXXXXXXXXXXXXXXXXXXXXSAIEAIDMK 297
VMEGSG+MVVTAVGVNSQ GIIFTLLGA +++ +
Sbjct: 267 VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKKQDGAVAMEMQPLKSAEGG 326
Query: 298 PVEVAEKHD-----EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE 352
+E EK ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + ++ FVI+
Sbjct: 327 EMEEREKKKANVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVIDGR 386
Query: 353 EWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDA 408
W A +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMM+DNNLVRHLDA
Sbjct: 387 MWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMRDNNLVRHLDA 446
Query: 409 CETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNS 468
CETMGNATAICSDKTGTLTTNRMT VQ+Y+ + YK +P + I +V IS+NS
Sbjct: 447 CETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEVPAPSALTPKILDILVHAISINS 506
Query: 469 GYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR 528
YT+KI+ PE LP+QVGNKTECALLGFV+ + +++Q VR+ +PE+ +VYTFNSVR
Sbjct: 507 AYTTKILPPEKEGALPRQVGNKTECALLGFVLDLKRDFQPVREQIPEDKLYKVYTFNSVR 566
Query: 529 KSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC 587
KSMSTVI +G +R+++KGASEI+LKKC+ I NG L F + +V+ +IEPMAC
Sbjct: 567 KSMSTVIRTPDGGFRLFSKGASEILLKKCTNILNSNGELRSFRPRDRDDMVKKIIEPMAC 626
Query: 588 DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEA 647
DGLRTI IAY+DF + +P+WD+E+ +V LTC+ V+GIEDPVRPEVPEA
Sbjct: 627 DGLRTICIAYRDFTAAQ----------EPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEA 676
Query: 648 IKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707
I+KCQRAGIT+RMVTGDNINTAR+IA KCGI++PGED+L LEGKEFNRR+R+ GE++Q
Sbjct: 677 IRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQE 736
Query: 708 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767
LDKVWP+LRVLARSSP+DK+TLVKG+IDS R+VVAVTGDGTNDGPALKKADVGFA
Sbjct: 737 RLDKVWPKLRVLARSSPTDKHTLVKGIIDSNTGEQRQVVAVTGDGTNDGPALKKADVGFA 796
Query: 768 MGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 827
MGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF G
Sbjct: 797 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTG 856
Query: 828 ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNII 887
AC QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+
Sbjct: 857 ACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMMKNIL 916
Query: 888 GQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKI 947
G A+YQL IIF +LF G+ DI +GR A S P++H+TIIFNTFV+M LFNEINARKI
Sbjct: 917 GHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKI 976
Query: 948 HGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLV 1007
HG+RNVF G+F+NPIF +I + T Q++IVQ+GG F+ L+ EQW WCLF G+G LV
Sbjct: 977 HGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGIGELV 1036
Query: 1008 WQQIVTTVPTKRLPKIFSWGRG------------QPESEAAMNTRQQRAAHIXXXXXXXX 1055
W Q++ T+PT +L + G G + E E R+ R I
Sbjct: 1037 WGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEIDHAERELRRGQILWFRGLNR 1096
Query: 1056 XXXXXXVIRAFKSNL-EDLEE 1075
V++AF+S+L E LE+
Sbjct: 1097 IQTQIRVVKAFRSSLYEGLEK 1117
|
|
| UNIPROTKB|K7GRJ7 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 3317 (1172.7 bits), Expect = 0., P = 0.
Identities = 675/1101 (61%), Positives = 814/1101 (73%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
+G TL +LR LME+RG E + K+ E YG V +C++L TSP EGL + +DLE RR+++G
Sbjct: 27 FGCTLAELRSLMELRGAEALQKVQEAYGDVGGLCRRLKTSPTEGLADNPSDLEKRRQIYG 86
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE-SE---------HD 119
N IPPK KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE SE D
Sbjct: 87 QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSAGAED 146
Query: 120 NEETKYEWIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQI 179
E + WIEGAA TAFND+SKEKQFRGLQ++IE E KF VIR +L Q+
Sbjct: 147 EGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQV 206
Query: 180 FVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTH 239
V +VVGDI Q+KYGDLLPADG+LIQ NDLKIDESSLTGESDHV+K DPM+LSGTH
Sbjct: 207 PVAALVVGDIAQVKYGDLLPADGVLIQGNDLKIDESSLTGESDHVRKSADKDPMLLSGTH 266
Query: 240 VMEGSGKMVVTAVGVNSQAGIIFTLLGA--TXXXXXXXXXXXXXXXXXXXXSAIEAIDMK 297
VMEGSG+MVVTAVGVNSQ GIIFTLLGA +++ +
Sbjct: 267 VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKKQDGAVAMEMQPLKSAEGG 326
Query: 298 PVEVAEKHD-----EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE 352
+E EK ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + ++ FV++
Sbjct: 327 EMEEREKKKANVPKKEKSVLQGKLTKLAVQIGKAGLLMSAVTVIILVVYFVIETFVVDGR 386
Query: 353 EWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDA 408
W A +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDA
Sbjct: 387 AWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDA 446
Query: 409 CETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNS 468
CETMGNATAICSDKTGTLTTNRMT VQ+Y+ + YK IP + I +V IS+NS
Sbjct: 447 CETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINS 506
Query: 469 GYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR 528
YT+KI+ PE LP+QVGNKTECALLGF++ + +++Q VR+ +PE+ +VYTFNSVR
Sbjct: 507 AYTTKILPPEKEGALPRQVGNKTECALLGFILDLKQDFQPVREQIPEDKLHKVYTFNSVR 566
Query: 529 KSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC 587
KSMSTVI +G +R+++KGASEI+LKKC++I NG L F + +V+ VIEPMAC
Sbjct: 567 KSMSTVIRTPDGGFRLFSKGASEILLKKCTHILNSNGELRGFRPRDRDDMVKKVIEPMAC 626
Query: 588 DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEA 647
DGLRTI IA++DF + +P+WD+E+ +V LTC+ V+GIEDPVRPEVPEA
Sbjct: 627 DGLRTICIAFRDFAAMQ----------EPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEA 676
Query: 648 IKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707
I+KCQRAGIT+RMVTGDNINTAR+IA KCGI++PGED+L LEGKEFNRR+R+ GE++Q
Sbjct: 677 IRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQE 736
Query: 708 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767
LDKVWP+LRVLARSSP+DK+TLVKG+IDS R+VVAVTGDGTNDGPALKKADVGFA
Sbjct: 737 RLDKVWPKLRVLARSSPTDKHTLVKGIIDSTSGEQRQVVAVTGDGTNDGPALKKADVGFA 796
Query: 768 MGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 827
MGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF G
Sbjct: 797 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTG 856
Query: 828 ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNII 887
AC QDSPLKAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+
Sbjct: 857 ACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMMKNIL 916
Query: 888 GQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKI 947
G A+YQL IIF +LF GD DI +GR A + P++H+TIIFNTFV+M LFNEINARKI
Sbjct: 917 GHAVYQLTIIFTLLFVGDLFFDIDSGRNAPLHAPPSEHYTIIFNTFVMMQLFNEINARKI 976
Query: 948 HGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLV 1007
HG+RNVF G+F+NPIF +I + T Q++IVQ+GG F+ L+ EQW WCLF GVG LV
Sbjct: 977 HGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELV 1036
Query: 1008 WQQIVTTVPTKRLPKIFSWGRG------------QPESEAAMNTRQQRAAHIXXXXXXXX 1055
W Q++ T+PT +L + G G + E E R+ R I
Sbjct: 1037 WGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEIDHAERELRRGQILWFRGLNR 1096
Query: 1056 XXXXXXVIRAFKSNL-EDLEE 1075
V++AF+S+L E LE+
Sbjct: 1097 IQTQIRVVKAFRSSLYEGLEK 1117
|
|
| UNIPROTKB|F1MQ01 ATP2B4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 3228 (1141.4 bits), Expect = 0., P = 0.
Identities = 652/1004 (64%), Positives = 771/1004 (76%)
Query: 53 GLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP 112
GL G+ DLE R++VFG N+IPPK KTFL+LVWEALQDVTLIILEIAA++SL LSFY P
Sbjct: 1 GLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRP 60
Query: 113 -GGESEHD--------NEETKYE--WIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQ 161
GGE+E D +E + E WIEGAA TAFND+SKEKQFRGLQN+
Sbjct: 61 PGGENERDVGLAVTSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNR 120
Query: 162 IEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGES 221
IE E KF+VIR + Q+ V +IVVGDI QIKYGDLLPADGILIQ NDLKIDESSLTGES
Sbjct: 121 IEKEQKFSVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGES 180
Query: 222 DHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATXXXXXXXXXXXXX 281
DHVKK DPM+LSGTHVMEGSG+MVVTAVG+NSQ GIIFTLLGA+
Sbjct: 181 DHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGASEGEEEEKKKKAKT 240
Query: 282 XXXXXXX----SAIEAIDMKPVE--VAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTV 335
++ E ID + E A+ ++KSVLQ KLT+LA+QIG AG ++ +TV
Sbjct: 241 QDGVALEIQPLNSQEGIDSEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITV 300
Query: 336 VILISQYCVKKFVIEDEEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAY 391
+ILI + + FVI+ W A IY + FV+FF++GVTVLVVAVPEGLPLAVT+SLAY
Sbjct: 301 LILILYFVIDNFVIQRRPWLAECTPIYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAY 360
Query: 392 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYED 451
SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT NRM+ VQAY+ + +Y IP +D
Sbjct: 361 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMSVVQAYIGDTRYHQIPSPDD 420
Query: 452 IPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRD 511
+ + IV GIS+NS YTSKI+ PE LP+QVGNKTECALLGFV + ++Y VR
Sbjct: 421 LVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVSDLKQDYHAVRS 480
Query: 512 DLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFT 570
++PEE +VYTFNSVRKSMSTVI K G YR+Y+KGASEIIL+KC+ I + G F
Sbjct: 481 EVPEEKLYKVYTFNSVRKSMSTVIEKPGGGYRMYSKGASEIILRKCNRILDKKGEAVPFK 540
Query: 571 KDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTC 630
+ +VR VIEPMAC+GLRT+ IAY+DF N +G+P WD+ES I++ LTC
Sbjct: 541 NKDRDEMVRTVIEPMACEGLRTLCIAYRDF-------N----DGEPPWDNESEILTELTC 589
Query: 631 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 690
+ V+GIEDPVRPEVPEAI KC+RAGIT+RMVTGDNINTAR+IATKCGIV PG+D+L LEG
Sbjct: 590 IAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEG 649
Query: 691 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 750
KEFNR +R+ GEV+Q LDK+WP+LRVLARSSP+DK+TLVKG+IDS + R+VVAVTG
Sbjct: 650 KEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGDQRQVVAVTG 709
Query: 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFL 810
DGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFL
Sbjct: 710 DGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFL 769
Query: 811 QFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKP 870
QFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL R+P
Sbjct: 770 QFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTDSLLKRRP 829
Query: 871 YGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIF 930
YGR K LIS+TMMKNI+G A+YQL +IF ++F G+K DI +GR A S P+QH+TIIF
Sbjct: 830 YGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRRAPLHSPPSQHYTIIF 889
Query: 931 NTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSL 990
NTFVLM LFNEIN+RKIHG+RNVF G+F N IF S+ + T +SQ+IIV++GG F+ L
Sbjct: 890 NTFVLMQLFNEINSRKIHGERNVFSGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKL 949
Query: 991 TLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESE 1034
TL QW WCLF G+G L+W Q+++T+PT+ L + G G + E
Sbjct: 950 TLSQWFWCLFIGIGELLWGQVISTIPTQSLKFLKEAGHGTTKEE 993
|
|
| WB|WBGene00019875 mca-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 3219 (1138.2 bits), Expect = 0., P = 0.
Identities = 636/1039 (61%), Positives = 782/1039 (75%)
Query: 11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
Y ++ +L+ LME+RG E + K+N Y GV +C+KL T P GL +LEHRR FG
Sbjct: 7 YDCSISELKLLMELRGAEALEKVNSTYNGVEGLCRKLKTDPINGLPNDTKELEHRRTAFG 66
Query: 70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE-SEHDNEETKYEWI 128
N IPP PSK+F +L WEALQD+TL+IL +AALVSLGLSFY P E + +D+ E++ WI
Sbjct: 67 KNEIPPAPSKSFFRLAWEALQDITLVILLVAALVSLGLSFYKPPAEHASNDSSESEAGWI 126
Query: 129 EGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGD 188
EG A TA ND++KEKQFRGLQ++IE EHKF+VIR E I V ++VVGD
Sbjct: 127 EGVAILVAVLVVVLVTALNDWTKEKQFRGLQSKIETEHKFSVIRGGEPLDIVVNELVVGD 186
Query: 189 ICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMV 248
I ++KYGDLLPADG+LIQSNDLKIDESSLTGESD ++K E FDP++LSGTH MEGSG+ +
Sbjct: 187 IARVKYGDLLPADGLLIQSNDLKIDESSLTGESDLIRKSEEFDPVLLSGTHAMEGSGRFL 246
Query: 249 VTAVGVNSQAGIIFTLLGATXXXXXXXXXXXXXXXXXXXXSAI-EAIDMKPVEVAEKHDE 307
VTAVG+NSQ GII +LLGA + + +D K E+ +E
Sbjct: 247 VTAVGLNSQTGIIMSLLGAAKEKKDDKKEEPTTLTNGNHMNGLGNGVD-KAAELPVPEEE 305
Query: 308 K-----KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREF 362
+ KSVLQ KL+ LA+QIGY GS +A TV+ILI ++C+ K+ IE + ++A F
Sbjct: 306 EVGRMSKSVLQTKLSNLALQIGYIGSIVAAATVLILIIRHCISKYAIEGKSFEASDISHF 365
Query: 363 VRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 422
V F ++GVTVLV+AVPEGLPLA+TL+L YSVKKMMKDNNLVRHLDACETMGNAT+ICSDK
Sbjct: 366 VNFIIIGVTVLVIAVPEGLPLAITLALTYSVKKMMKDNNLVRHLDACETMGNATSICSDK 425
Query: 423 TGTLTTNRMTAVQAYVCEVQYK-NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENAN 481
TGTLTTNRMT VQ Y+ YK N PKYE + + GI +NSGY S ++ P+N
Sbjct: 426 TGTLTTNRMTCVQQYINSEFYKGNAPKYEQMDPSTRDILFNGIVINSGYNSTVVTPKNPG 485
Query: 482 ELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG- 540
E Q+GNKTEC+LLGF++ G++Y+ +R PEE +VYTFNS RKSM TVI +
Sbjct: 486 EQRGQIGNKTECSLLGFIMDSGRSYEDLRRQFPEEKLYKVYTFNSSRKSMMTVIELGDKK 545
Query: 541 YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDF 600
YR+Y KGASEIIL +C+YI+G++G +E+F + +NVIEPMA DGLRTI +A+KD
Sbjct: 546 YRIYAKGASEIILTRCNYIFGKSGKIEQFGPKEAAVMTKNVIEPMASDGLRTIGLAFKDL 605
Query: 601 V---TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGIT 657
V + K E + + +G+ +W+DE I T + V+GI+DPVRPEVP AI KCQ+AGIT
Sbjct: 606 VPAGSKKYEYEEEY-DGEIDWEDEEKIREGQTVIAVMGIQDPVRPEVPAAIAKCQKAGIT 664
Query: 658 IRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717
+RMVTGDNINTARSIAT+CGI++PG D+L LEGKEFN R+RD +G+V Q D +WP+LR
Sbjct: 665 VRMVTGDNINTARSIATQCGIMQPGGDFLALEGKEFNARIRDADGKVNQQKFDAIWPKLR 724
Query: 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK 777
VLAR+ PSDKY LVKG+I+S ++ REVVAVTGDGTND PALKKADVGFAMGI GTDVAK
Sbjct: 725 VLARAQPSDKYVLVKGIIESTVTKNREVVAVTGDGTNDAPALKKADVGFAMGIAGTDVAK 784
Query: 778 EASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLK 837
EASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAV +AFIGACA+ DSPLK
Sbjct: 785 EASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVTIAFIGACAISDSPLK 844
Query: 838 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVII 897
AVQMLWVNLIMDTLASLALATEMPT DLL RKPYGRTK+LIS+TM+KNI+G A+YQL I+
Sbjct: 845 AVQMLWVNLIMDTLASLALATEMPTEDLLNRKPYGRTKSLISRTMVKNIVGHAVYQLAIL 904
Query: 898 FGILFFGDKLL-DIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 956
F I+F+GDKL+ + P+GR AE GS P+ HFTIIFN FVLMTL NEINARKIHG+RNVF+G
Sbjct: 905 FAIMFWGDKLIPNTPSGRNAELGSPPSAHFTIIFNAFVLMTLVNEINARKIHGERNVFKG 964
Query: 957 LFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVP 1016
+FTNPIF IW+ T++S ++IVQ+GG F+T L L QW C+ GVG L W QI+ +P
Sbjct: 965 IFTNPIFCVIWITTLISHILIVQFGGQWFSTAPLDLTQWIICICCGVGELFWGQIINCIP 1024
Query: 1017 TKRLPKIFSWGRG--QPES 1033
LPK F +G+G QP S
Sbjct: 1025 ASILPKSFRFGKGDVQPTS 1043
|
|
| UNIPROTKB|D4A1Z6 Atp2b4 "Plasma membrane calcium-transporting ATPase 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 3208 (1134.3 bits), Expect = 0., P = 0.
Identities = 662/1048 (63%), Positives = 786/1048 (75%)
Query: 10 QYGITLRQLRELMEVRGREGIAKIN-EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G TL LR+LME+R + + +I+ YG V EIC +L TSP EGL G+ DLE RR VF
Sbjct: 21 EFGCTLMDLRKLMELRAADAVTQISAHYGSVQEICARLKTSPVEGLSGNPADLEKRRLVF 80
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP-GGESE---H------ 118
G N+IPPK KTFL+LVWEALQDVTLIILEIAA++SL LSFY P GGE+E H
Sbjct: 81 GKNMIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGGENEICGHIVSNPE 140
Query: 119 DNEETKYEWIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
++EE + WIEGAA TAFND+SKEKQFRGLQ++IE E KF++IR +L Q
Sbjct: 141 EDEEGETGWIEGAAILASVIIVVFVTAFNDWSKEKQFRGLQSRIELEQKFSIIRNGQLIQ 200
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
+ V +IVVGDI Q+KYGDLLPADGILIQ NDLKIDESSLTGESDHVKK DPM+LSGT
Sbjct: 201 LPVAEIVVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKTLDKDPMLLSGT 260
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATXXXXXXXXXXXXXXXXXXXX----SAIEAI 294
HVMEGSG+MVVTAVG+NSQ GIIFTLLGA ++ E +
Sbjct: 261 HVMEGSGRMVVTAVGINSQTGIIFTLLGANEEEDDEKKKKAKTQDGVALEIQPLNSQEGL 320
Query: 295 DMKPVEV-AEKHDEK-KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE 352
D + E A K +K KSVLQ KLT+LA+QIG AG ++ILTV+ILI + V FVI+
Sbjct: 321 DSEEKEKKASKGPKKEKSVLQGKLTRLAVQIGKAGLIMSILTVLILILYFVVDNFVIQRR 380
Query: 353 EW----KAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDA 408
W +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDA
Sbjct: 381 AWLPECTPVYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDA 440
Query: 409 CETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNS 468
CETMGNATAICSDKTGTLT NRMT VQAY+ Y+ IPK +D+P ++ IV I +NS
Sbjct: 441 CETMGNATAICSDKTGTLTMNRMTVVQAYIGGTHYRQIPKPDDLPPNVLDLIVNSICINS 500
Query: 469 GYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR 528
YTSKI+ PE LP+QVGNKTEC LLGFV + ++YQ VR ++PEE +VYTFNSVR
Sbjct: 501 AYTSKILPPEKEGGLPRQVGNKTECGLLGFVTDLKQDYQAVRSEMPEEKLFKVYTFNSVR 560
Query: 529 KSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKF-TKDMQGRLVRNVIEPMA 586
KSMSTVI K + G+RV++KGASEI+L+KC I + G + F TKD + +VRNVIEPMA
Sbjct: 561 KSMSTVIRKPEGGFRVFSKGASEIMLRKCDRILNKEGGIVPFKTKD-RDNMVRNVIEPMA 619
Query: 587 CDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPE 646
+GLRTI IAY+DF D E P+W++E+ I + L C+ V+GIEDPVRPEVP+
Sbjct: 620 SEGLRTIGIAYRDF--DGEE---------PSWENENEIFTGLVCIAVVGIEDPVRPEVPD 668
Query: 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ 706
AI KC+RAGIT+RMVTGDN+NTAR+IATKCGI+ PG+D+L LEGKEFNR +R+ GEV+Q
Sbjct: 669 AINKCKRAGITVRMVTGDNVNTARAIATKCGILTPGDDFLCLEGKEFNRLIRNEKGEVEQ 728
Query: 707 NLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766
LDKVWPRLRVLARSSP+DK+TLVKG+IDS I R+VVAVTGDGTNDGPALKKADVGF
Sbjct: 729 EKLDKVWPRLRVLARSSPTDKHTLVKGIIDSNIGEQRQVVAVTGDGTNDGPALKKADVGF 788
Query: 767 AMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFI 826
AMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF
Sbjct: 789 AMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFS 848
Query: 827 GACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNI 886
GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL R+PYGR K LIS+TMMKNI
Sbjct: 849 GACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTDSLLRRRPYGRNKPLISRTMMKNI 908
Query: 887 IGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARK 946
+G A+YQL I+F ++F GDKL DI +GR A S P+QH+TI+FNTFVLM LFNEIN+RK
Sbjct: 909 LGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTFVLMQLFNEINSRK 968
Query: 947 IHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTL 1006
IHG++NVF G++ N IF S+ + T QV G A+ + T E W CL L
Sbjct: 969 IHGEKNVFAGVYRNIIFCSVVLGTFFCQVSFCVVGKRAYGSVQFTEEGWITCLVLAWAVL 1028
Query: 1007 VWQQIVTTVPTKRLPKIFSWGRGQPESE 1034
Q+++ +PTK L + G G + E
Sbjct: 1029 CKSQVISAIPTKSLKFLKEAGHGSDKEE 1056
|
|
| UNIPROTKB|F1MN60 ATP2B2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 3134 (1108.3 bits), Expect = 0., P = 0.
Identities = 643/1100 (58%), Positives = 787/1100 (71%)
Query: 10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
++G T+ +LR LME+RG E + KI E YG IC++L TSP EGL G+ DLE R+++F
Sbjct: 23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTDAICRRLKTSPVEGLPGTAPDLEKRKQIF 82
Query: 69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH---------- 118
G N IPPK KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGESNEGCATAQGGAE 142
Query: 119 DNEETKYEWIEGAAXXXXXXXXXXXTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQ 178
D E + WIEGAA TAFND+SKEKQFRGLQ++IE E KF V+R ++ Q
Sbjct: 143 DEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQ 202
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGT 238
I V +IVVGDI Q+KYGDLLPADG+ IQ NDLKIDESSLTGESD V+K DPM+LSGT
Sbjct: 203 IPVAEIVVGDIAQVKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGT 262
Query: 239 HVMEGSGKMVVTAVGVNSQAGIIFTLLGATXXXXXXXXXXXXXXXXXXXXS-----AIEA 293
HVMEGSG+MVVTAVGVNSQ GIIFTLLGA + E
Sbjct: 263 HVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKQQDGAAAMEMQPLKSAEG 322
Query: 294 IDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEE 353
D + A H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ +
Sbjct: 323 GDADDKKKANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKP 382
Query: 354 W----KAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDAC 409
W +Y + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDAC
Sbjct: 383 WLPECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDAC 442
Query: 410 ETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSG 469
ETMGNATAICSDKTGTLTTNRMT VQAYV ++ YK IP I +V I++NS
Sbjct: 443 ETMGNATAICSDKTGTLTTNRMTVVQAYVGDIHYKEIPDPSSINAKTMELLVHAIAINSA 502
Query: 470 YTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRK 529
YT+KI+ PE LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRK
Sbjct: 503 YTTKILPPEKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRAQMPEEKLYKVYTFNSVRK 562
Query: 530 SMSTVIPKKN-GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACD 588
SMSTVI + +R+Y+KGASEI+LKKC I G F + +V+ VIEPMACD
Sbjct: 563 SMSTVIKLPDESFRMYSKGASEIVLKKCCKILNGVGEPRVFRPRDRDEMVKKVIEPMACD 622
Query: 589 GLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAI 648
GLRTI +AY+DF + +P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI
Sbjct: 623 GLRTICVAYRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAI 672
Query: 649 KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 708
+KCQRAGIT+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q
Sbjct: 673 RKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQER 732
Query: 709 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768
+DK+WP+LRVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAM
Sbjct: 733 IDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAM 792
Query: 769 GITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 828
GI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GA
Sbjct: 793 GIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGA 852
Query: 829 CAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIG 888
C QD P +VQ L L++ S+ + + PTP LL RK +GRTK L S+ +K+++
Sbjct: 853 CITQDGPASSVQSLSPLLLLSIFPSIRVFSNEPTPVLLPRKSHGRTKPLKSEEELKSLLI 912
Query: 889 QAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIH 948
I + +++ LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIH
Sbjct: 913 HEIKRRLLLVTRLFAGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIH 972
Query: 949 GQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVW 1008
G+RNVF+G+F NPIF +I + T Q++IVQ+GG F+ L L+QW WC+F G+G LVW
Sbjct: 973 GERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVW 1032
Query: 1009 QQIVTTVPTKRLPKIFSWGR-GQPES--EAAMNT---------RQQRAAHIXXXXXXXXX 1056
Q++ T+PT RL + GR Q E E +N R+ R I
Sbjct: 1033 GQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEEIDHAERELRRGQILWFRGLNRI 1092
Query: 1057 XXXXXVIRAFKSNL-EDLEE 1075
V++AF+S+L E LE+
Sbjct: 1093 QTQIRVVKAFRSSLYEGLEK 1112
|
|
| FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 3086 (1091.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 587/784 (74%), Positives = 675/784 (86%)
Query: 305 HDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVR 364
H ++KSVLQAKLTKLAIQIGYAGSTIA+LTV+ILI Q+C+K FVI+++ WK Y V+
Sbjct: 343 HKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVK 402
Query: 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424
++GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG
Sbjct: 403 HLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 462
Query: 425 TLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484
TLTTNRMT VQ+Y+CE K +P DIP+ + + I GISVNS YTS IMA N +LP
Sbjct: 463 TLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGISVNSAYTSNIMAGHNPGDLP 522
Query: 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRV 543
QVGNKTECALLGFV +G YQ++RD++ E+ FTRVYTFNSVRKSM TVIP+ NG YR+
Sbjct: 523 IQVGNKTECALLGFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVIPRPNGGYRL 582
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
YTKGASEII+KKC++IYG G LEKFT+DMQ RL+R VIEPMACDGLRTIS+AY+DFV
Sbjct: 583 YTKGASEIIMKKCAFIYGHEGTLEKFTRDMQERLIREVIEPMACDGLRTISVAYRDFVPG 642
Query: 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 663
KA IN+VHI+G+PNWDDE NI+++LTCLCV+GIEDPVRPEVP+AI+KCQRAGIT+RMVTG
Sbjct: 643 KAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTG 702
Query: 664 DNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 723
DNINTARSIA+KCGI++P +D+LILEGKEFNRR+RD+NG++QQ+L+DKVWP+LRVLARSS
Sbjct: 703 DNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRVLARSS 762
Query: 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 783
P+DKYTLVKG+IDS +S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDII
Sbjct: 763 PTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 822
Query: 784 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 843
LTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW
Sbjct: 823 LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 882
Query: 844 VNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 903
VNLIMDTLASLALATE PTPDLLLRKPYGRTK LIS+TMMKNI+GQA+YQL+IIFG+LF
Sbjct: 883 VNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFV 942
Query: 904 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIF 963
GD +LDI +GRG E + PTQHFTIIFNTFV+MTLFNEINARKIHGQRNV EGL TNPIF
Sbjct: 943 GDVILDIESGRGQELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIF 1002
Query: 964 YSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKI 1023
Y+IW+ TM+SQV+I+QYG +AF+T +LTL+QW WC+FFG+GTLVW Q++T+VPT++LPKI
Sbjct: 1003 YTIWIFTMISQVLIIQYGKMAFSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKI 1062
Query: 1024 FSWGRGQPESEA-AMNTRQQR-----------AAHIXXXXXXXXXXXXXXVIRAFKSNLE 1071
SWGRG PE MN ++R A I VIRAF+S LE
Sbjct: 1063 LSWGRGHPEEYTDGMNLGEERFDSIDSDKKPRAGQILWIRGLTRLQTQLRVIRAFRSTLE 1122
Query: 1072 DLEE 1075
DL E
Sbjct: 1123 DLNE 1126
|
|
| ZFIN|ZDB-GENE-061027-60 atp2b4 "ATPase, Ca++ transporting, plasma membrane 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 2540 (899.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 498/751 (66%), Positives = 601/751 (80%)
Query: 292 EAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIED 351
E + K V V +K +KSVLQ KLT+LA+QIG AG ++ +TVVILI + +K F IE
Sbjct: 340 EEKEKKKVNVTKK---EKSVLQGKLTRLAVQIGKAGLIMSAVTVVILILYFVIKTFGIEG 396
Query: 352 EEWKA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLD 407
EWKA IY + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLD
Sbjct: 397 IEWKAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLD 456
Query: 408 ACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVN 467
ACETMGNATAICSDKTGTLT NRMT VQAY+ + YK +P+ E I +I +V IS+N
Sbjct: 457 ACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYKTVPEPEAIKPEILEILVNSISIN 516
Query: 468 SGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSV 527
S YT+KI+ PE LP+ VGNKTECALLG V+ + ++YQ +RD++PEE +VYTFNS
Sbjct: 517 SAYTTKILPPEKEGGLPRHVGNKTECALLGLVLELKRDYQPIRDEVPEEKLYKVYTFNSS 576
Query: 528 RKSMSTVIPKKNG--YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPM 585
RKSMSTVI +G +R+Y+KGASEI+L+KCS+I +G F + +V+ VIEPM
Sbjct: 577 RKSMSTVIKNSSGPGFRMYSKGASEIVLRKCSHILDASGQQRVFKAKDRDEMVQKVIEPM 636
Query: 586 ACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVP 645
ACDGLRTI +A +DF T+ P+WD+E++I++ LTC+CV+GIEDPVRPEVP
Sbjct: 637 ACDGLRTICVAMRDFSTE------------PDWDNEADILNDLTCICVVGIEDPVRPEVP 684
Query: 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQ 705
EAI KCQRAGIT+RMVTGDNINTAR+IATKCGI++PGED+L LEGK+FN+++R++ GEV+
Sbjct: 685 EAISKCQRAGITVRMVTGDNINTARAIATKCGILQPGEDFLCLEGKDFNQQIRNDKGEVE 744
Query: 706 QNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765
Q LDKVWP+LRVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVG
Sbjct: 745 QERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTVGETRQVVAVTGDGTNDGPALKKADVG 804
Query: 766 FAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 825
FAMGI GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF
Sbjct: 805 FAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 864
Query: 826 IGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKN 885
GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKN
Sbjct: 865 TGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRDKPLISRTMMKN 924
Query: 886 IIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINAR 945
I+G AIYQLVI F +LF G+K +I +GR A S P++H+TIIFN FV+M LFNEINAR
Sbjct: 925 ILGHAIYQLVITFTLLFAGEKFFNIDSGRSALLHSQPSEHYTIIFNVFVMMQLFNEINAR 984
Query: 946 KIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGT 1005
KIHG+RNVFEG++ NPIF S+ + T Q+IIVQ+GG F+ +LT++QW WC+F GVG
Sbjct: 985 KIHGERNVFEGIYRNPIFCSVVLGTFALQIIIVQFGGKPFSCTALTIDQWLWCIFIGVGE 1044
Query: 1006 LVWQQIVTTVPTKRLPKIFSWGRGQPESEAA 1036
L+W Q++T +PT RL + G G P+ + A
Sbjct: 1045 LLWGQLITAIPTHRLKFLKEAGHGIPKEDIA 1075
|
|
| UNIPROTKB|F1N7J2 ATP2B1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 2539 (898.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 508/799 (63%), Positives = 614/799 (76%)
Query: 295 DMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW 354
D K + A ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W
Sbjct: 345 DEKDKKKANLPKKEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPW 404
Query: 355 KA----IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACE 410
A IY + FV+FF++GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACE
Sbjct: 405 LAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACE 464
Query: 411 TMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGY 470
TMGNATAICSDKTGTLT NRMT VQAY+ E YK IP E IP +I S +V GISVN Y
Sbjct: 465 TMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKIPDPEAIPPNILSYLVTGISVNCAY 524
Query: 471 TSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKS 530
TSKI+ PE LP+ VGNKTECALLGF++ + ++YQ VR+++PEE +VYTFNSVRKS
Sbjct: 525 TSKILPPEKEGGLPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKS 584
Query: 531 MSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDG 589
MSTV+ +G YR+++KGASEIILKKC I NG + F + +V+ VIEPMA +G
Sbjct: 585 MSTVLKNSDGSYRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEG 644
Query: 590 LRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIK 649
LRTI +A++DF + E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIK
Sbjct: 645 LRTICLAFRDFPAGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIK 695
Query: 650 KCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLL 709
KCQRAGIT+RMVTGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +
Sbjct: 696 KCQRAGITVRMVTGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERI 755
Query: 710 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769
DK+WP+LRVLARSSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMG
Sbjct: 756 DKIWPKLRVLARSSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMG 815
Query: 770 ITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGAC 829
I GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC
Sbjct: 816 IAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGAC 875
Query: 830 AVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQ 889
QDSPLKAVQMLWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G
Sbjct: 876 ITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGH 935
Query: 890 AIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHG 949
A YQLV++F +LF G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG
Sbjct: 936 AFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHG 995
Query: 950 QRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQ 1009
+RNVFEG+F N IF +I + T V Q+IIVQ+GG F+ L++EQW W +F G+GTL+W
Sbjct: 996 ERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLGMGTLLWG 1055
Query: 1010 QIVTTVPTKRLPKIFSWGRGQ-----PESEAAMNT-------RQQRAAHIXXXXXXXXXX 1057
Q+++T+PT RL + G G PE E A + R+ R I
Sbjct: 1056 QLISTIPTSRLKFLKEAGHGTQKEEIPEEELAEDVEEIDHAERELRRGQILWFRGLNRIQ 1115
Query: 1058 XXXXVIRAFKSNL-EDLEE 1075
V+ AF+S+L E LE+
Sbjct: 1116 TQIRVVNAFRSSLYEGLEK 1134
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q64568 | AT2B3_RAT | 3, ., 6, ., 3, ., 8 | 0.6182 | 0.9615 | 0.8553 | yes | N/A |
| O22218 | ACA4_ARATH | 3, ., 6, ., 3, ., 8 | 0.4049 | 0.8042 | 0.8737 | yes | N/A |
| Q64542 | AT2B4_RAT | 3, ., 6, ., 3, ., 8 | 0.6151 | 0.9526 | 0.8861 | no | N/A |
| P23220 | AT2B1_PIG | 3, ., 6, ., 3, ., 8 | 0.6306 | 0.9490 | 0.8704 | no | N/A |
| P23634 | AT2B4_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6189 | 0.9392 | 0.8468 | no | N/A |
| Q01814 | AT2B2_HUMAN | 3, ., 6, ., 3, ., 8 | 0.5950 | 0.9678 | 0.8712 | no | N/A |
| P11505 | AT2B1_RAT | 3, ., 6, ., 3, ., 8 | 0.6375 | 0.9347 | 0.8314 | no | N/A |
| P11506 | AT2B2_RAT | 3, ., 6, ., 3, ., 8 | 0.6048 | 0.9517 | 0.8567 | no | N/A |
| Q65X71 | ACA6_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.3942 | 0.7998 | 0.8765 | yes | N/A |
| Q9R0K7 | AT2B2_MOUSE | 3, ., 6, ., 3, ., 8 | 0.6215 | 0.9624 | 0.8989 | no | N/A |
| Q16720 | AT2B3_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6185 | 0.9687 | 0.8885 | yes | N/A |
| P58165 | AT2B2_OREMO | 3, ., 6, ., 3, ., 8 | 0.6431 | 0.8909 | 0.8965 | N/A | N/A |
| Q00804 | AT2B1_RABIT | 3, ., 6, ., 3, ., 8 | 0.6205 | 0.9347 | 0.8374 | no | N/A |
| P20020 | AT2B1_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6375 | 0.9347 | 0.8314 | no | N/A |
| Q9HDW7 | ATC2_SCHPO | 3, ., 6, ., 3, ., 8 | 0.3894 | 0.7935 | 0.6873 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1119 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-124 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-124 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-122 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-79 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-62 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-61 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-52 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 6e-52 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 6e-48 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-33 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-32 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-32 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-30 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-27 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-26 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-26 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-23 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-21 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 6e-20 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-19 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-18 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-17 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-16 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-15 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-13 | |
| pfam12424 | 67 | pfam12424, ATP_Ca_trans_C, Plasma membrane calcium | 2e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-11 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 3e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-09 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 9e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-06 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 3e-06 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 2e-04 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.001 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.001 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.002 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1171 bits (3031), Expect = 0.0
Identities = 492/987 (49%), Positives = 630/987 (63%), Gaps = 86/987 (8%)
Query: 35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTL 94
+ GG I KL T NEG+ S + LE R +V+G N +P KP K+FLQ+VW AL D TL
Sbjct: 41 KLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTL 100
Query: 95 IILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQ 154
I+L +AA+VSL L PG +T+ WIEG AILVSVI+VVLVTA NDY KE Q
Sbjct: 101 ILLSVAAVVSLVLGLPEPG----EGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQ 156
Query: 155 FRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDE 214
FR L N+ + K AVIR + +QI + DIVVGDI + GD++PADG+ I L+IDE
Sbjct: 157 FRQL-NREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDE 215
Query: 215 SSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVK 274
SS+TGESD +KKG + DP +LSGT V EGSG+M+VTAVGVNS G + L
Sbjct: 216 SSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAG----- 270
Query: 275 QEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILT 334
E + LQ KL++LA IG G A+L
Sbjct: 271 --------------------------------EDSTPLQEKLSELAGLIGKFGMGSAVLL 298
Query: 335 VVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVK 394
++L +Y + D + F+ F++ VT++VVAVPEGLPLAVT++LAYS+K
Sbjct: 299 FLVLSLRYVFRIIR-GDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMK 357
Query: 395 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454
KMMKDNNLVRHL ACETMG+ATAICSDKTGTLT N M+ VQ Y+ E ++ ++P+
Sbjct: 358 KMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK 417
Query: 455 DIASKIVEGISVNSGYTSKIMAPENANE--LPKQVGNKTECALLGFVVAIGKNYQTVRDD 512
+ + +VEGIS+NS + E + +G+KTECALL F + + ++YQ VR
Sbjct: 418 HVRNILVEGISLNSS------SEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVR-- 469
Query: 513 LPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTK 571
EE ++Y FNS RK MS V+ G YR + KGASEI+LK C NG +
Sbjct: 470 -AEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISD 528
Query: 572 DMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCL 631
D + R +VIEP+A D LRTI +AY+DF ++ P D + LT +
Sbjct: 529 DDKDR-CADVIEPLASDALRTICLAYRDFAPEEF----------PRKDYPNK---GLTLI 574
Query: 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 691
V+GI+DP+RP V EA+++CQRAGIT+RMVTGDNI+TA++IA CGI+ G L +EGK
Sbjct: 575 GVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGK 632
Query: 692 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 751
EF V +D + P+LRVLARSSP DK LV + D EVVAVTGD
Sbjct: 633 EFRSLV--------YEEMDPILPKLRVLARSSPLDKQLLVLMLKDM-----GEVVAVTGD 679
Query: 752 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQ 811
GTND PALK ADVGF+MGI+GT+VAKEASDIIL DDNF+SIV+AV WGRNVYD+I KFLQ
Sbjct: 680 GTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQ 739
Query: 812 FQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 871
FQLTVNVVAVI+ F+G+C SPL AVQ+LWVNLIMDTLA+LALATE PT LL RKP
Sbjct: 740 FQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPI 799
Query: 872 GRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFN 931
GR LIS++M KNI+GQA YQLV+ F +LF G + D+ + TI+FN
Sbjct: 800 GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQ-QGELNTIVFN 858
Query: 932 TFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLT 991
TFVL+ LFNEINARK++ +RNVFEGLF N IF +I T QVIIV++GG F+T SL+
Sbjct: 859 TFVLLQLFNEINARKLY-ERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLS 917
Query: 992 LEQWGWCLFFGVGTLVWQQIVTTVPTK 1018
+EQW C+ G+ +L++ ++ +P +
Sbjct: 918 IEQWIGCVLLGMLSLIFGVLLRLIPVE 944
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 605 bits (1561), Expect = 0.0
Identities = 296/1014 (29%), Positives = 459/1014 (45%), Gaps = 137/1014 (13%)
Query: 16 RQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPP 75
E+ +L+TSP GL S+ +++ R + +G N +P
Sbjct: 7 NFSVNKSSSTPVTSETWHPLSVERNELLLELFTSPTTGL--SEEEVKRRLKKYGPNELPE 64
Query: 76 KPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILV 135
+ ++ L+ +D +I+L +AAL+S + + G + IL+
Sbjct: 65 EKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGV-------------DAIVILL 111
Query: 136 SVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195
V++ L+ +Y EK L+ K V+R + +I ++V GDI ++ G
Sbjct: 112 VVVINALLGFVQEYRAEKALEALKKM--SSPKAKVLRDGKFVEIPASELVPGDIVLLEAG 169
Query: 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGELF------------DPMVLSGTHVMEG 243
D++PAD L++S+DL++DES+LTGES V+K L D M+ SGT V+ G
Sbjct: 170 DVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSG 229
Query: 244 SGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAE 303
K +V A G ++ G I LL
Sbjct: 230 RAKGIVVATGFETEFGKIARLLPTKK---------------------------------- 255
Query: 304 KHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 363
E K+ LQ KL KL + + L V+ + +
Sbjct: 256 ---EVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL-----------------FRGGNGL 295
Query: 364 R-FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 422
F+ + + V AVPEGLP VT++LA ++M KDN +VR L+A ET+G+ ICSDK
Sbjct: 296 LESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDK 355
Query: 423 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 482
TGTLT N+MT + Y+ K+I + + + ++ + T +
Sbjct: 356 TGTLTQNKMTVKKIYINGGG-KDIDDKDLKDSPALLRFLLAAALCNSVTPE-------KN 407
Query: 483 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVI-PKKN 539
Q G+ TE AL+ F A + L E + + F+S RK MS ++ +
Sbjct: 408 GWYQAGDPTEGALVEF--AEKLGFSLDLSGLEVE-YPILAEIPFDSERKRMSVIVKTDEG 464
Query: 540 GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKD 599
Y ++ KGA E+IL++C I G LE T++ L V E +A +GLR +++AYK
Sbjct: 465 KYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKE-LASEGLRVLAVAYKK 519
Query: 600 FVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIR 659
+ + IE D L L + GIEDP R +V EAI++ + AGI +
Sbjct: 520 LDRAEKDDEVDEIESD------------LVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567
Query: 660 MVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719
M+TGD++ TA +IA +CGI E L+++G E + + L ++ L V
Sbjct: 568 MITGDHVETAIAIAKECGIEAEAESALVIDGAELD--------ALSDEELAELVEELSVF 619
Query: 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 779
AR SP K +V+ + S VVA+TGDG ND PALK ADVG AMG GTD AKEA
Sbjct: 620 ARVSPEQKARIVEALQKSG-----HVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEA 674
Query: 780 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACA-VQDSPLKA 838
+DI+L DDNF++IV AV+ GR VY +I KF+ + L+ NV V+ I + + PL
Sbjct: 675 ADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTP 734
Query: 839 VQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIF 898
+Q+LW+NL+ D+L +LAL E P D++ R P G + L ++ + I I+F
Sbjct: 735 LQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILF 794
Query: 899 GILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GL 957
+ F L T F VL+ L + R R L
Sbjct: 795 ILTFLL--YLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG--RPFLSSLL 850
Query: 958 FTNPIFYSIWVITMVSQVIIVQYG---GIAFATHSLTLEQWGWCLFFGVGTLVW 1008
F+N + ++ ++ Q++I+ F L+L +W + + L
Sbjct: 851 FSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYI 904
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 392 bits (1009), Expect = e-124
Identities = 194/734 (26%), Positives = 301/734 (41%), Gaps = 202/734 (27%)
Query: 133 ILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQI 192
IL V+V VL+ E R L +++ V+R K+I D+V GD+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLV 60
Query: 193 KYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDP--------MVLSGTHVMEGS 244
K G+ +PADG+L+ +DES+LTGES+ V K L + +V +GT+V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 245 GKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEK 304
+VVT G+ + G I V +
Sbjct: 120 LIVVVTPTGILTTVGRI-------------------------------------AVVVKT 142
Query: 305 HDEKKSVLQAKLTKLAIQIG-YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 363
E ++ LQ+K +L I +A+ + L + W + +
Sbjct: 143 GFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRG-----------WDPNSIFKAL 191
Query: 364 RFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKT 423
+ VLV+ VP LP AVT++LA ++ K LVR+L+A E +G +CSDKT
Sbjct: 192 LRA---LIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKT 248
Query: 424 GTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANEL 483
GTLT N+MT Y+ + N +
Sbjct: 249 GTLTKNKMTLQGVYIDGGKEDNSSSLVAC-----------------------------DN 279
Query: 484 PKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YR 542
G+ E ALL + + + ++ V+ F+SV K MS ++ +G
Sbjct: 280 NYLSGDPMEKALLKSA---ELVGKADKGNKEYKIL-DVFPFSSVLKRMSVIVETPDGSDL 335
Query: 543 VYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 602
++ KGA E IL++C+ + E +A GLR ++ A K+
Sbjct: 336 LFVKGAPEFILERCN-------NYE------------EKYLELARQGLRVLAFASKELED 376
Query: 603 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVT 662
D L L +I EDP+RP+ E I++ + AGI + M+T
Sbjct: 377 D------------------------LEFLGLITFEDPLRPDAKETIEELKAAGIKVVMIT 412
Query: 663 GDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 722
GDN+ TA++IA + GI V AR
Sbjct: 413 GDNVLTAKAIAKELGID--------------------------------------VFARV 434
Query: 723 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 782
SP K +V+ + +VA+TGDG ND PALKKADVG AMG AK A+DI
Sbjct: 435 SPEQKLQIVEALQKKG-----HIVAMTGDGVNDAPALKKADVGIAMG------AKAAADI 483
Query: 783 ILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQML 842
+L DD+ S+IVKAV GR ++ +I + + + N++ + +A +
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV------------- 530
Query: 843 WVNLIMDTLASLAL 856
+ L++ LA+LAL
Sbjct: 531 -IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-124
Identities = 276/968 (28%), Positives = 446/968 (46%), Gaps = 164/968 (16%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
V E C KL T GL SQ + HRR G N + ++ + LI+L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQ-EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 99 IA-ALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRG 157
IA A++S+ + D + +I +++++VV V +Y EK
Sbjct: 68 IASAVISVFMG--------NID---------DAVSITLAILIVVTVGFVQEYRSEKSLEA 110
Query: 158 LQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSL 217
L + + +IR+ +L+ + +V GD+ + GD +PAD ++++ DL IDES+L
Sbjct: 111 LNKLVP--PECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNL 168
Query: 218 TGESDHVKK------GELFDPM------VLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLL 265
TGE+ V K + GT V G GK +V G N++ G +F ++
Sbjct: 169 TGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMM 228
Query: 266 GATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGY 325
A + KP K+ LQ + L Q+
Sbjct: 229 QAIE---------------------------KP----------KTPLQKSMDLLGKQLSL 251
Query: 326 AGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAV 385
+ ++ V+ L+ + ++W + F + V++ V A+PEGLP+ V
Sbjct: 252 V--SFGVIGVICLVG-------WFQGKDW--------LEMFTISVSLAVAAIPEGLPIIV 294
Query: 386 TLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYK- 444
T++LA V +M K +VR L + ET+G+ ICSDKTGTLT N MT + + + +
Sbjct: 295 TVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM 354
Query: 445 -NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP---ENA---NELPKQVGNKTECALLG 497
N E I V + + A NA NE +GN T+ AL+
Sbjct: 355 LNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIE 414
Query: 498 FVVAIGKNYQTVRDDLPEEVFTRV--YTFNSVRKSMSTVI--PKKNGYRVYTKGASEIIL 553
++ G D E + RV F+S RK M+ + + KGA E +L
Sbjct: 415 LLMKFGL-------DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVL 467
Query: 554 KKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIE 613
K C+Y ++G T+ + + E MA GLR I+ A
Sbjct: 468 KYCTYYQKKDGKTLTLTQQQRDVIQEEAAE-MASAGLRVIAFASG--------------- 511
Query: 614 GDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA 673
P LT L ++GI DP RP V EA+ G+ I M+TGD+ TA SIA
Sbjct: 512 --PEKGQ-------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA 562
Query: 674 TKCGI-VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVK 732
+ G+ K + + G++ + + L ++ P++ V AR+SP K +VK
Sbjct: 563 RRLGMPSKTSQS---VSGEKLD--------AMDDQQLSQIVPKVAVFARASPEHKMKIVK 611
Query: 733 GMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSI 792
+ +VVA+TGDG ND PALK AD+G AMG TGTDVAKEA+D+ILTDD+F++I
Sbjct: 612 AL-----QKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATI 666
Query: 793 VKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLA 852
+ A+ G+ ++++I F+ FQL+ +V A+ + + +PL A+Q+LW+N++MD
Sbjct: 667 LSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPP 726
Query: 853 SLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILF-FGDKLLDIP 911
+ +L E D++ + P R +++K ++K I+ AI +I+ G LF F ++ D
Sbjct: 727 AQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAI---IIVVGTLFVFVREMQD-- 781
Query: 912 TGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVIT 970
G + + T+ F FV +FN + R ++VFE G F+N +F +
Sbjct: 782 -------GVITARDTTMTFTCFVFFDMFNALACR--SQTKSVFEIGFFSNRMFNYAVGGS 832
Query: 971 MVSQVIIV 978
++ Q++++
Sbjct: 833 IIGQLLVI 840
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 397 bits (1022), Expect = e-122
Identities = 288/977 (29%), Positives = 443/977 (45%), Gaps = 148/977 (15%)
Query: 85 VWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVT 144
V E +D+ + IL +AA VS L+++ G EET ++E IL+ ++ +V
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEG-------EETVTAFVEPFVILLILVANAIVG 53
Query: 145 AFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGIL 204
+ + + EK L+ + E EH V+R I D+V GDI ++ GD +PAD +
Sbjct: 54 VWQERNAEKAIEALK-EYESEHA-KVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRV 111
Query: 205 IQSNDLKIDESSLTGESDHVKKGELFDP-----------MVLSGTHVMEGSGKMVVTAVG 253
+ L++D+S LTGES V K P M+ SGT V+ G + VV G
Sbjct: 112 LSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTG 171
Query: 254 VNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQ 313
++++ G I + A + E +KK DE
Sbjct: 172 MSTEIGKIRDEMRAAEQE------DTPLQKKLDE------------------------FG 201
Query: 314 AKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVL 373
L+K+ IG I IL VI I + D + + + +F + V +
Sbjct: 202 ELLSKV---IGL----ICILVWVINIGHF-------NDPALGGGWIQGAIYYFKIAVALA 247
Query: 374 VVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT- 432
V A+PEGLP +T LA +KM K N +VR L + ET+G T ICSDKTGTLTTN+M+
Sbjct: 248 VAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV 307
Query: 433 ----AVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYT------SKIMAPENANE 482
A+ + + PE I + V G + I A N +
Sbjct: 308 CKVVALDPSSSSLNEFCVTGTTYAPEG--GVIKDDGPVAGGQDAGLEELATIAALCNDSS 365
Query: 483 LP--------KQVGNKTECALLGFVVAIGKNYQTVRDDLP------------EEVFTRVY 522
L ++VG TE AL V +G T + F ++
Sbjct: 366 LDFNERKGVYEKVGEATEAALKVLVEKMG-LPATKNGVSSKRRPALGCNSVWNDKFKKLA 424
Query: 523 T--FNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRN 580
T F+ RKSMS + G +++ KGA E +L++C++I +G T M+ ++
Sbjct: 425 TLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSV 484
Query: 581 VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPV 640
+ E LR +++A+KD + E DP + I S LT + V+G+ DP
Sbjct: 485 IKEMGTTKALRCLALAFKDIPDPREEDLLS----DPA--NFEAIESDLTFIGVVGMLDPP 538
Query: 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI--LEGKEFNRRVR 698
RPEV +AI+KC+ AGI + M+TGDN TA +I + GI P ED G+EF
Sbjct: 539 RPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF----- 593
Query: 699 DNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 758
D G +Q + +R PS K LV+ + E+VA+TGDG ND PA
Sbjct: 594 DEMGPAKQR---AACRSAVLFSRVEPSHKSELVE-----LLQEQGEIVAMTGDGVNDAPA 645
Query: 759 LKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV 818
LKKAD+G AMG +GT+VAKEASD++L DDNF++IV AV GR +Y+++ +F+++ ++ N+
Sbjct: 646 LKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
Query: 819 VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALI 878
V+ F+ A L VQ+LWVNL+ D L + AL P D++ + P + LI
Sbjct: 705 GEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLI 764
Query: 879 SKTMMKNIIGQAIY-QLVIIFGILFF----------GDKLLDIPTGRG--AEYGSLPTQH 925
+ + + +Y L + G +++ D P
Sbjct: 765 TGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPA 824
Query: 926 FTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVI-----TMVSQVIIVQY 980
TI + V++ +FN +NA L P + + W+I +M +I+
Sbjct: 825 RTISLSVLVVIEMFNALNALSEDQS------LLRMPPWVNKWLIGAICLSMALHFLILYV 878
Query: 981 GGIA--FATHSLTLEQW 995
++ F L+L W
Sbjct: 879 PFLSRIFGVTPLSLTDW 895
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 4e-79
Identities = 246/881 (27%), Positives = 405/881 (45%), Gaps = 141/881 (16%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSN-IIPPKPSKTFLQLVWEALQDVTLIIL 97
+ E+ +K T ++GL ++ R+ G N + PP + +++ + + ++L
Sbjct: 22 LDELERKYGTDLSKGLSAARAAEILARD--GPNALTPPPTTPEWVKFCRQLFGGFS-MLL 78
Query: 98 EIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKE----K 153
I A++ L++ E + Y + V + VV++T Y +E K
Sbjct: 79 WIGAILCF-LAYGIQASTEEEPQNDNLY-------LGVVLSAVVIITGCFSYYQEAKSSK 130
Query: 154 QFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKID 213
+N + + VIR E I +VVGD+ ++K GD +PAD +I + K+D
Sbjct: 131 IMESFKNMVPQQA--LVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVD 188
Query: 214 ESSLTGESDHVKKGELF---DPM-----VLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLL 265
SSLTGES+ + F +P+ T+ +EG+ + +V G + G I +L
Sbjct: 189 NSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASL- 247
Query: 266 GATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGY 325
S L+ T +AI+I +
Sbjct: 248 -------------------------------------------ASGLENGKTPIAIEIEH 264
Query: 326 AGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAV 385
I + V + +S + + ++ +A+ F++G+ +V VPEGL V
Sbjct: 265 FIHIITGVAVFLGVS-FFILSLILGYTWLEAV-------IFLIGI--IVANVPEGLLATV 314
Query: 386 TLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKN 445
T+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMT V + + N
Sbjct: 315 TVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT-----VAHMWFDN 369
Query: 446 IPKYEDIPEDIASKIVEGISVNSGYTSKIMA----------PENANELPKQV-GNKTECA 494
D ED + + S S+I EN L + V G+ +E A
Sbjct: 370 QIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESA 429
Query: 495 LLGFVVAIGKNYQTVRDDLPE--EVFTRVYTFNSVRKSMSTV----IPKKNGYRVYTKGA 548
LL + + +R+ P+ E+ FNS K ++ P+ + + KGA
Sbjct: 430 LLKCIELCLGSVMEMRERNPKVVEI-----PFNSTNKYQLSIHENEDPRDPRHLLVMKGA 484
Query: 549 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 608
E IL++CS I +G + ++++ +N + G R + + ++
Sbjct: 485 PERILERCSSIL-IHGKEQPLDEELK-EAFQNAYLELGGLGERVLGFCHLYLPDEQ---- 538
Query: 609 QVHIEGDPNWDDESNI-VSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNIN 667
EG D+ N +L + +I + DP R VP+A+ KC+ AGI + MVTGD+
Sbjct: 539 --FPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 596
Query: 668 TARSIATKCGIVKPG----EDY---LILEGKEFNRR-----------VRDNNGEVQQNLL 709
TA++IA GI+ G ED L + + N R ++D E +L
Sbjct: 597 TAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEIL 656
Query: 710 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769
K + V AR+SP K +V+G + A +VAVTGDG ND PALKKAD+G AMG
Sbjct: 657 -KYHTEI-VFARTSPQQKLIIVEGC--QRQGA---IVAVTGDGVNDSPALKKADIGVAMG 709
Query: 770 ITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGAC 829
I G+DV+K+A+D+IL DDNF+SIV V GR ++D++ K + + LT N+ + I
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFII 769
Query: 830 AVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKP 870
A PL + +L ++L D + +++LA E D++ R+P
Sbjct: 770 ANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 231 bits (589), Expect = 3e-62
Identities = 130/391 (33%), Positives = 199/391 (50%), Gaps = 39/391 (9%)
Query: 518 FTRVYTFNSVRKSMSTVIPKKNG--YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQG 575
F + F+S K M+++ +G Y +Y KGA E I++ CS G++G +D
Sbjct: 527 FIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDR 586
Query: 576 RLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIG 635
L+ +E +A +GLR ++ A K F +Q+ E ES++ L +IG
Sbjct: 587 ELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEF----LGLIG 642
Query: 636 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG--------EDYLI 687
I DP R E A++KC +AGI + M+TGD TA++IA + GI+ P D ++
Sbjct: 643 IYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMV 702
Query: 688 LEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVA 747
+ G +F+ + +D + V+AR +P K +++ + K A
Sbjct: 703 MTGSQFD--------ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRK-----AFCA 749
Query: 748 VTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIS 807
+TGDG ND P+LK A+VG AMGI G+DVAK+ASDI+L+DDNF+SI+ A+ GR ++D+I
Sbjct: 750 MTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIM 809
Query: 808 KFLQFQLTVNVVAVIVAFIGACAVQDS------PLKAVQMLWVNLIMDTLASLALATEMP 861
KF+ L NV I+ IG A +D PL V++LW +I ++ L E
Sbjct: 810 KFVLHLLAENVAEAILLIIG-LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKA 868
Query: 862 TPDLLLRKPYGR-----TKALISKTMMKNII 887
PDL+ R P+ K LI
Sbjct: 869 APDLMDRLPHDNEVGIFQKELIIDMFAYGFF 899
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-61
Identities = 178/795 (22%), Positives = 319/795 (40%), Gaps = 195/795 (24%)
Query: 55 GGSQTDLEHRREVFGSNIIPPK---PSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYH 111
G + + + R +G N +P K P FL W L ++E AA++++ L
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLS----WVMEAAAIIAIALE--- 53
Query: 112 PGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVI 171
W++ IL +++ + + L+ + + + V+
Sbjct: 54 --------------NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKAR--VL 97
Query: 172 RQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFD 231
R + ++I ++V GD+ ++K GD++PAD L + + +++D+++LTGES V K
Sbjct: 98 RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK--TG 155
Query: 232 PMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAI 291
+ SG+ V +G + VVTA G+N+ G L+ +T+
Sbjct: 156 DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETG-------------------- 195
Query: 292 EAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIG-YAGSTIAILTVVILISQYCVKKFVIE 350
L K+ +IG + I +L ++ L+ F
Sbjct: 196 ---------------------SGHLQKILSKIGLFLIVLIGVLVLIELVVL-----FFGR 229
Query: 351 DEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACE 410
E FRE ++F +V +LV +P +P +++++A ++ K +V L A E
Sbjct: 230 GE-----SFREGLQFALV---LLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIE 281
Query: 411 TMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGY 470
+ +CSDKTGTLT N+++ + +D+ + +
Sbjct: 282 ELAGMDILCSDKTGTLTLNKLS--------IDEILPFFNGFDKDDVL--------LYAAL 325
Query: 471 TSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRK- 529
S+ E+ + + V K+ + RD F F+ V K
Sbjct: 326 ASRE---EDQDAIDTAVLGSA------------KDLKEARDGYKVLEFV---PFDPVDKR 367
Query: 530 SMSTVIPKKNG--YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC 587
+ +TV + G ++V TKGA ++IL C K V ++ +A
Sbjct: 368 TEATVEDPETGKRFKV-TKGAPQVILDLC------------DNKKEIEEKVEEKVDELAS 414
Query: 588 DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEA 647
G R + +A D E + H G ++ + DP R + E
Sbjct: 415 RGYRALGVARTD------EEGRWHFLG------------------LLPLFDPPRHDTKET 450
Query: 648 IKKCQRAGITIRMVTGDNINTARSIATKCGI-----------VKPGEDYLILEGKEFNRR 696
I++ + G+ ++MVTGD++ A+ A + G+ D L E
Sbjct: 451 IERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEM--- 507
Query: 697 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDG 756
V D +G + V+P KY +V+ + +V +TGDG ND
Sbjct: 508 VEDADGFAE------VFPE----------HKYEIVEILQKRG-----HLVGMTGDGVNDA 546
Query: 757 PALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 816
PALKKADVG A+ TD A+ A+DI+LT+ S IV A++ R ++ + ++ +++
Sbjct: 547 PALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAE 605
Query: 817 NVVAVIVAFIGACAV 831
+ IV F G +
Sbjct: 606 TI--RIVFFFGLLIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 181 bits (463), Expect = 5e-52
Identities = 83/280 (29%), Positives = 126/280 (45%), Gaps = 58/280 (20%)
Query: 132 AILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQ 191
IL+ V++ L+ A+ +Y K + L+ + VIR + ++I ++VVGDI
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLP-PTAATVIRDGKEEEIPADELVVGDIVL 59
Query: 192 IKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTA 251
+K GD +PADG +I L++DES+LTGES V+K V +GT V+ G K++VTA
Sbjct: 60 LKPGDRVPADGRII-EGSLEVDESALTGESLPVEKSR--GDTVFAGTVVLSGELKVIVTA 116
Query: 252 VGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSV 311
G +++ G I L+ E+ K+
Sbjct: 117 TGEDTELGKIARLV-------------------------------------EEAKSAKTP 139
Query: 312 LQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVT 371
LQ L KLA + +AIL +I +F+ + +
Sbjct: 140 LQRLLDKLAKILVPIVLALAILVFLIWF-----------------FRGGDFLEALLRALA 182
Query: 372 VLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACET 411
VLV A PE LPLAV L+LA ++ K LV++L A ET
Sbjct: 183 VLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 6e-52
Identities = 189/837 (22%), Positives = 335/837 (40%), Gaps = 167/837 (19%)
Query: 41 EICKKLYTSPNEGL---------GGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQD 91
K E L G + ++ R FG N + L+L+ A +
Sbjct: 10 NNLLKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNN 69
Query: 92 VTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAF-NDYS 150
+ IL + VS + +E I+ +++ + F +
Sbjct: 70 PFIYILAMLMGVSYLT------------------DDLEATVIIALMVLASGLLGFIQESR 111
Query: 151 KEKQFRGLQNQIEGEHKFAVIR------QNELKQIFVGDIVVGDICQIKYGDLLPADGIL 204
E+ L+N ++ + V+R + ++ + +V GD+ ++ GD++PAD +
Sbjct: 112 AERAAYALKNMVK--NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARV 169
Query: 205 IQSNDLKIDESSLTGESDHVKK---------GELFD--PMVLSGTHVMEGSGKMVVTAVG 253
I + DL I++S+LTGES V+K E+ + + GT+V+ G + VV A G
Sbjct: 170 ISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATG 229
Query: 254 VNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQ 313
+ F L E Q DK K
Sbjct: 230 ----SSTWFGSLAIAATERRGQTAFDKGVKS----------------------------- 256
Query: 314 AKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVL 373
++KL I+ + ++ VV++I+ ++ + +A F+ + V
Sbjct: 257 --VSKLLIRF-----MLVMVPVVLMINGL------MKGDWLEA---------FLFALAVA 294
Query: 374 VVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTA 433
V PE LP+ V+ +LA M K +V+ L A + G +C+DKTGTLT +++
Sbjct: 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIE- 353
Query: 434 VQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTEC 493
+ K+ D + + ++++ +NS + + N L V K +
Sbjct: 354 ------------LEKHIDSSGETSERVLKMAWLNSYFQTGW-----KNVLDHAVLAKLD- 395
Query: 494 ALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP-KKNGYRVYTKGASEII 552
+ D++P F+ R+ +S V+ + R+ KGA E +
Sbjct: 396 ---ESAARQTASRWKKVDEIP---------FDFDRRRLSVVVENRAEVTRLICKGAVEEM 443
Query: 553 LKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHI 612
L C++ G + ++ + ++++ M G+R I++A K T K
Sbjct: 444 LTVCTHKR-FGGAVVTLSESEK-SELQDMTAEMNRQGIRVIAVATK---TLKVG------ 492
Query: 613 EGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSI 672
E D DE L +G DP + EAI + GI ++++TGDN I
Sbjct: 493 EADFTKTDEEQ----LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI 548
Query: 673 ATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVK 732
+ GI D+L+ E E+ L + + + AR +P + K
Sbjct: 549 CQEVGI--DANDFLLGADIE----------ELSDEELARELRKYHIFARLTP-----MQK 591
Query: 733 GMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSI 792
I + V GDG ND PAL+KADVG ++ T D+AKEASDIIL + + +
Sbjct: 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVL 650
Query: 793 VKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMD 849
+ V+ GRN + +I K+L+ + N V + + + P+ ++ +L NL+ D
Sbjct: 651 EEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 6e-48
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 834 SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQ 893
PL +Q+LW+NL+ D L +LAL E P PDL+ R P + L S+ +++ I+ Q +
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 894 LVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNV 953
++ + F G I S T+ FNT VL LFN +NAR +
Sbjct: 62 AIVTLLVFFLGLLGFGI---------SESGLAQTMAFNTLVLSQLFNALNARSLRRSLFK 112
Query: 954 FEGLFTNPIFYSIWVITMVSQVIIVQYGGIA--FATHSLTLEQWGWCLFFGVGTLVWQQI 1011
GLF+N + +++++ Q++I+ G+ F T L+LEQW L + L+ ++
Sbjct: 113 I-GLFSNKLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVEL 171
Query: 1012 V 1012
Sbjct: 172 R 172
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 2e-33
Identities = 119/470 (25%), Positives = 201/470 (42%), Gaps = 93/470 (19%)
Query: 373 LVVAV---PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 429
L VAV PE LP+ VT +LA K+ K +V+ LDA + G +C+DKTGTLT +
Sbjct: 326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQD 385
Query: 430 RM-----TAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484
++ T + E +++ +NS Y + + N L
Sbjct: 386 KIVLENHTDISGKTSE------------------RVLHSAWLNSHYQTGL-----KNLLD 422
Query: 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKN-GYRV 543
V E ++ +Q + D++P F+ R+ MS V+ + +++
Sbjct: 423 TAV---LEGVDEESARSLASRWQKI-DEIP---------FDFERRRMSVVVAENTEHHQL 469
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
KGA E IL CS + NG + M R ++ V + + GLR +++A K
Sbjct: 470 ICKGALEEILNVCSQVR-HNGEIVPLDDIMLRR-IKRVTDTLNRQGLRVVAVATKYLPAR 527
Query: 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 663
+ + + DES+ L I DP + A+K + +G+T++++TG
Sbjct: 528 EGDYQRA---------DESD----LILEGYIAFLDPPKETTAPALKALKASGVTVKILTG 574
Query: 664 DNINTARSIATKCGI----VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719
D+ A + + G+ V G D L E +
Sbjct: 575 DSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTT----------------LF 618
Query: 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 779
AR +P K +V + VV GDG ND PAL+ AD+G ++ D+A+EA
Sbjct: 619 ARLTPMHKERIVT-----LLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREA 672
Query: 780 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV-----NVVAVIVA 824
+DIIL + + + + V+ GR + ++ K++ ++T NV +V+VA
Sbjct: 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYI--KMTASSNFGNVFSVLVA 720
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-32
Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 43/197 (21%)
Query: 631 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 690
+ VI + D +RP+ EAI + GI + M+TGDN TA +IA + GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 691 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 750
V A P DK +V+ ++ A VA+ G
Sbjct: 577 -------------------------DEVRAELLPEDKAEIVR-----ELQAEGRKVAMVG 606
Query: 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFL 810
DG ND PAL ADVG AMG +GTDVA EA+D++L D+ S++ +A+ R I + L
Sbjct: 607 DGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNL 665
Query: 811 QFQLTVNVVAVIVAFIG 827
+ N +A+ +A G
Sbjct: 666 FWAFGYNAIAIPLAAGG 682
|
Length = 713 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 6e-32
Identities = 122/439 (27%), Positives = 193/439 (43%), Gaps = 58/439 (13%)
Query: 46 LYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSL 105
+ TS EGL + + +HR + G N + ++ + + ++L IAA +S
Sbjct: 19 IGTSIPEGL--THDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISF 76
Query: 106 GLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGE 165
+ HD WIEG I + + +L+ +Y EK L+N
Sbjct: 77 AM----------HD-------WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL--AS 117
Query: 166 HKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVK 225
VIR + I D+V GDIC +K GD +PAD LI++ + DE+ LTGES V
Sbjct: 118 PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVI 177
Query: 226 K--------------GELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDE 271
K G+ + + S + V +G K + A +NS+ G I L D
Sbjct: 178 KDAHATFGKEEDTPIGDRIN-LAFSSSAVTKGRAKGICIATALNSEIGAIAAGL-QGDGG 235
Query: 272 EVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIA 331
++ +KD K+R I + K A + L KL+KLA+ + IA
Sbjct: 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTG-AFLGLNVGTPLHRKLSKLAVILFC----IA 290
Query: 332 ILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAY 391
I+ +I+++ + KF ++ E AIY + + + +PE L +++++A
Sbjct: 291 IIFAIIVMAAH---KFDVDKE--VAIY----------AICLAISIIPESLIAVLSITMAM 335
Query: 392 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYED 451
M K N +VR LDA E +G ICSDKTGT+T +M A Q ++ +I +D
Sbjct: 336 GAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD 395
Query: 452 IPEDIASKIVEGISVNSGY 470
+ V GI S Y
Sbjct: 396 -AFNPNEGNVSGIPRFSPY 413
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-30
Identities = 77/246 (31%), Positives = 108/246 (43%), Gaps = 48/246 (19%)
Query: 587 CDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL----TCLCVIGIEDPVRP 642
DG + I F+ E + + + V + L VI + D +RP
Sbjct: 328 VDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRP 387
Query: 643 EVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNN 701
E EAI +RAG I + M+TGDN + A ++A + GI D
Sbjct: 388 EAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--------------------DE- 426
Query: 702 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK 761
V A P DK +VK ++ VVA+ GDG ND PAL
Sbjct: 427 ----------------VHAELLPEDKLAIVK-----ELQEEGGVVAMVGDGINDAPALAA 465
Query: 762 ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV 821
ADVG AMG G+DVA EA+DI+L +D+ SS+ A+ R I + L + L N+VA+
Sbjct: 466 ADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524
Query: 822 IVAFIG 827
+A G
Sbjct: 525 PLAAGG 530
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 2e-27
Identities = 145/688 (21%), Positives = 245/688 (35%), Gaps = 149/688 (21%)
Query: 372 VLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRM 431
++ + VP LP +++ + S+ ++ K G C DKTGTLT + +
Sbjct: 405 IITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL 464
Query: 432 TAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKT 491
+ + + S + ++ T K+ +L VG+
Sbjct: 465 DLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLT-KL-----EGKL---VGDPL 515
Query: 492 ECALLGFVVAI-----------GKNYQTVRDDLPEEV-FTRVYTFNSVRKSMSTVIPKKN 539
+ + DD P+E+ R + F+S + MS VI N
Sbjct: 516 DKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMS-VIVSTN 574
Query: 540 GYRV---YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 596
R + KGA E I C E D Q V++ +G R +++A
Sbjct: 575 DERSPDAFVKGAPETIQSLC--------SPETVPSDYQ-----EVLKSYTREGYRVLALA 621
Query: 597 YKDFVTDKAEINQV-HIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 655
YK+ K + + + D ESN LT L I E+P++P+ E IK+ +RA
Sbjct: 622 YKEL--PKLTLQKAQDLSRD---AVESN----LTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 656 ITIRMVTGDNINTARSIATKCGIVKPGEDYLIL---------EGKEFNRRVRD-----NN 701
I M+TGDN TA +A +CGIV P + LIL + + V D +
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNP-SNTLILAEAEPPESGKPNQIKFEVIDSIPFAST 731
Query: 702 GEVQ---------------------------------QNLLDKVWPRLRVLARSSPSDKY 728
LL ++ V AR +P K
Sbjct: 732 QVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKE 791
Query: 729 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM-----GITGTDVAKEAS--- 780
TLV+ + V + GDG ND ALK+ADVG ++ + +K AS
Sbjct: 792 TLVELLQKLD-----YTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSKLASISC 846
Query: 781 --DIILTDDNFSSIVKAVMWGR-NVYDSISKF---LQFQLTVNVVAVIVAFIGACAVQDS 834
++I GR + S F + L I+ IG S
Sbjct: 847 VPNVIRE-------------GRCALVTSFQMFKYMALYSLIQFYSVSILYLIG------S 887
Query: 835 PLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQL 894
L Q L ++L++ +L ++ P L +P L S ++ +++ Q + +
Sbjct: 888 NLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSN---LFSVYILTSVLIQFVLHI 944
Query: 895 VIIFGILFFGDKL----LDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQ 950
+ ++F + P E P T++F ++ F + ++ +
Sbjct: 945 LSQVYLVFELHAQPWYKPENPVDLEKEN--FPNLLNTVLF----FVSSFQYLITAIVNSK 998
Query: 951 RNVF-EGLFTN-PIFYSIWVITMVSQVI 976
F E ++ N P Y + + V+
Sbjct: 999 GPPFREPIYKNKPFVYLLITGLGLLLVL 1026
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-26
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 43/193 (22%)
Query: 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 691
V+ + D ++PE E I+ +R GI M+TGDN TA+++A + GI
Sbjct: 407 GVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN----------- 455
Query: 692 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 751
V A P DK L+K K+ +VVA+ GD
Sbjct: 456 --------------------------VRAEVLPDDKAALIK-----KLQEKGKVVAMVGD 484
Query: 752 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQ 811
G ND PAL +ADVG A+G GTDVA EA+D++L ++ + + A+ R I + L
Sbjct: 485 GINDAPALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLL 543
Query: 812 FQLTVNVVAVIVA 824
+ NV+A+ +A
Sbjct: 544 WAFGYNVIAIPIA 556
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 5e-26
Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 96/516 (18%)
Query: 373 LVVAV---PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 429
L VAV PE LP+ V+ +LA M + +V+ L+A + G +C+DKTGTLT +
Sbjct: 324 LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQD 383
Query: 430 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 489
R+ + E + ++ +D ++++ +NS + S + N
Sbjct: 384 RI------ILE-HHLDVSGRKD------ERVLQLAWLNSFHQSG-------------MKN 417
Query: 490 KTECALLGFVVAIGK-----NYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRV 543
+ A++ F + Y+ V D+LP F+ VR+ +S V+ G + +
Sbjct: 418 LMDQAVVAFAEGNPEIVKPAGYRKV-DELP---------FDFVRRRLSVVVEDAQGQHLL 467
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
KGA E +L +++ R+G + + + + + E DG R + +A ++
Sbjct: 468 ICKGAVEEMLAVATHV--RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGG 525
Query: 604 KAEINQVHIEGDPNWDDESNIV--SHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 661
++ Q DE ++V LT L DP + AI + G+ ++++
Sbjct: 526 ESR-AQYST------ADERDLVIRGFLTFL------DPPKESAAPAIAALRENGVAVKVL 572
Query: 662 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 721
TGDN I + G+ +PGE L G E + + L + V A+
Sbjct: 573 TGDNPIVTAKICREVGL-EPGE---PLLGTEI-----EAMDDAA---LAREVEERTVFAK 620
Query: 722 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 781
+P K ++K + A V GDG ND PAL+ ADVG ++ +G D+AKE++D
Sbjct: 621 LTPLQKSRVLKAL-----QANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESAD 674
Query: 782 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV-----NVVAVIV--AFIGACAVQDS 834
IIL + + + + V+ GR + +I K+L +T NV +V+V AFI
Sbjct: 675 IILLEKSLMVLEEGVIKGRETFGNIIKYL--NMTASSNFGNVFSVLVASAFIPF-----L 727
Query: 835 PLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKP 870
P+ A+ +L NL+ D ++ L+L + + LRKP
Sbjct: 728 PMLAIHLLLQNLMYD-ISQLSLPWDKMDKE-FLRKP 761
|
Length = 903 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 2e-25
Identities = 176/773 (22%), Positives = 298/773 (38%), Gaps = 163/773 (21%)
Query: 354 WKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNL----------- 402
A F F+ F ++ ++ +P + L V+L L SV+ +++L
Sbjct: 292 AAANGFFSFLTFLILFSSL----IP--ISLYVSLELVKSVQAYFINSDLQMYHEKTDTPA 345
Query: 403 -VRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY-KNIPKYEDI-------- 452
VR + E +G I SDKTGTLT N M + + V Y + +D
Sbjct: 346 SVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSY 405
Query: 453 -----PEDIASKIVEGIS---VNSGYTSKIMAP---------------------ENANEL 483
+ SK + V+ T+K A + E+
Sbjct: 406 VENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEI 465
Query: 484 PKQVGNKTECAL------LGFVVAIGKNYQTVRDDLPEEVFTRVYT------FNSVRKSM 531
Q + E AL +GFV + +++ + T+ Y FNS RK M
Sbjct: 466 TYQAASPDEAALVKAARDVGFVF-FERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRM 524
Query: 532 STVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGL 590
S ++ +G ++ KGA +I K+ S G N E+ + +E A +GL
Sbjct: 525 SVIVRNPDGRIKLLCKGADTVIFKRLSS--GGNQVNEETKEH---------LENYASEGL 573
Query: 591 RTISIAYKDFVTDKAEI-NQVHIEGDPNWDDES--------NIVSHLTCLCVIGIEDPVR 641
RT+ IAY++ ++ E N+ + E D +I L L IED ++
Sbjct: 574 RTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633
Query: 642 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL---------EGKE 692
VPE I+ ++AGI I ++TGD + TA +I C ++ + +++ +
Sbjct: 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEA 693
Query: 693 FNRRVRDNNGEVQQNLLDK---------------VWPRLR------------VLA-RSSP 724
+ + E NL D + L V+ R SP
Sbjct: 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753
Query: 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD--VAKEASDI 782
S K +V+ ++ K S G+ +A+ GDG ND +++ADVG +GI+G + A ASD
Sbjct: 754 SQKADVVR-LV--KKSTGKTTLAI-GDGANDVSMIQEADVG--VGISGKEGMQAVMASDF 807
Query: 783 ILTDDNFSSIVKAVMW-GRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ- 840
+ F + K ++ GR Y ISK + + N++ I+ F + S +
Sbjct: 808 AIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEG 865
Query: 841 --MLWVNLIMDTLASLALAT--EMPTPDLLLRKP--YGRT---KALISKTMMKNIIGQAI 891
M+ N+ L ++L + + L LR P Y + +KT ++ I
Sbjct: 866 WYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML-DGI 924
Query: 892 YQLVIIFGILFFGDKLLDI-PTGRGAEYGSLPTQHFT---IIFNTFVLMTLFNEINARKI 947
YQ ++IF F L D +G ++ S+ FT +I N + + + N N I
Sbjct: 925 YQSLVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEI-NRWN--WI 981
Query: 948 HGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLF 1000
+ + + + I+VI V I A + + L
Sbjct: 982 SL---ITIWG--SILVWLIFVI--VYSSIFPSPAFYKAAPRVMGTFGFWLVLL 1027
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-23
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 43/196 (21%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGIT-IRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 691
I + D RP+ EAI + + GI + M+TGD A +A + GI
Sbjct: 356 YILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI------------- 402
Query: 692 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 751
EV LL P DK +VK ++ VA+ GD
Sbjct: 403 ----------DEVHAELL--------------PEDKLEIVK-----ELREKYGPVAMVGD 433
Query: 752 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQ 811
G ND PAL ADVG AMG +G+DVA E +D++L +D+ S + +A+ R + + +
Sbjct: 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVV 493
Query: 812 FQLTVNVVAVIVAFIG 827
L + ++ +++A G
Sbjct: 494 IALGIILLLILLALFG 509
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-21
Identities = 67/347 (19%), Positives = 132/347 (38%), Gaps = 82/347 (23%)
Query: 93 TLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVT---AFNDY 149
TL+ +A + + S Y + + +++ L
Sbjct: 151 TLVA--LATIGAYAYSLY---------------ATLFPVYFEEAAMLIFLFLLGRYLEAR 193
Query: 150 SKEKQFRGLQNQIEGEHKFAVIRQN--ELKQIFVGDIVVGDICQIKYGDLLPADGILIQS 207
+K + R ++ ++ K A + + E +++ V ++ VGDI ++ G+ +P DG+++
Sbjct: 194 AKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG 253
Query: 208 NDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267
+ +DES LTGES V+K V +GT ++GS + VT VG
Sbjct: 254 SSS-VDESMLTGESLPVEKKP--GDEVFAGTVNLDGSLTIRVTRVG-------------- 296
Query: 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQI--GY 325
++ + I ++ VE A+ K A + +LA ++ +
Sbjct: 297 -------------------ADTTLARI-IRLVEEAQ---SSK----APIQRLADRVASYF 329
Query: 326 AGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAV 385
+ I + + W ++ + VLV+A P L LA
Sbjct: 330 VPVVLVIAALTFAL--------------WPLFGGGDWETALYRALAVLVIACPCALGLAT 375
Query: 386 TLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 432
++ + + + L++ +A E + + DKTGTLT +
Sbjct: 376 PTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPE 422
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 6e-20
Identities = 80/368 (21%), Positives = 144/368 (39%), Gaps = 86/368 (23%)
Query: 93 TLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKE 152
L+ +A + + + +EGA +L + +L + +K
Sbjct: 3 LLMA--LATIAAYAMG-----------------LVLEGALLLF---LFLLGETLEERAKG 40
Query: 153 KQFRGLQNQIEGEHKFAVIRQ--NELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDL 210
+ L + A + Q +++ V ++ VGDI ++ G+ +P DG++I
Sbjct: 41 RASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE 100
Query: 211 KIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDD 270
+DES+LTGES V+K E + V +GT +GS + VT +G +S I L
Sbjct: 101 -VDESALTGESMPVEKKEGDE--VFAGTINGDGSLTIRVTKLGEDSTLAQIVEL------ 151
Query: 271 EEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTI 330
V++ + K +R +A++ + + + I
Sbjct: 152 --VEEAQSSKAPIQR---------------LADR-------IASYYVPAVL-------AI 180
Query: 331 AILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLA 390
A+LT V+ ++ A+Y + VLVVA P L LA +++
Sbjct: 181 ALLTFVVWLAL----------GALGALY---------RALAVLVVACPCALGLATPVAIL 221
Query: 391 YSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYE 450
++ + L++ DA E + + DKTGTLTT + T V E E
Sbjct: 222 VAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVD---IEPLDDASISEE 278
Query: 451 DIPEDIAS 458
++ A+
Sbjct: 279 ELLALAAA 286
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 7e-20
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 478 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI-- 535
+ +G+ TE ALL F +G + + +R P FNS RK MSTV
Sbjct: 11 NEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRV---AEIPFNSERKRMSTVHKL 67
Query: 536 PKKNGYRVYTKGASEIILKKCSYI 559
+GYR++ KGA E IL++CS I
Sbjct: 68 EDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 4e-19
Identities = 70/317 (22%), Positives = 127/317 (40%), Gaps = 62/317 (19%)
Query: 126 EWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNE-LKQIFVGDI 184
E++EGA +L+ + + +Y+ + R L+ +E A + + L+++ V ++
Sbjct: 17 EYLEGALLLL---LFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEEL 73
Query: 185 VVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGS 244
VGD+ +K G+ +P DG+++ +DES+LTGES V+K V +G ++G
Sbjct: 74 KVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKAP--GDEVFAGAINLDGV 130
Query: 245 GKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEK 304
+VVT + +S I I V + E+
Sbjct: 131 LTIVVTKLP---------------------------------ADSTIAKI----VNLVEE 153
Query: 305 HDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVR 364
+K+ Q + + A T +L + + I + V + W
Sbjct: 154 AQSRKAKTQRFIDRFA-----RYYTPVVLAIALAI--WLVPGLLKRWPFW---------- 196
Query: 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424
+ +LVVA P L ++ + ++ + L++ A E + + DKTG
Sbjct: 197 -VYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTG 255
Query: 425 TLTTNRMTAVQAYVCEV 441
TLTT R V EV
Sbjct: 256 TLTTGRPKVVDVVPAEV 272
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 5e-18
Identities = 90/373 (24%), Positives = 151/373 (40%), Gaps = 89/373 (23%)
Query: 79 KTFLQLVWEALQ-----DVTLIILEIAA-----LVSLGLSFYHPGGESEHDNEETKYEWI 128
+ F + W+AL+ TLI L LV+L + G H +
Sbjct: 3 RPFYKSAWKALRHKTPNMDTLIALGTTVAYGYSLVALLANQVLTG-LHVHT-------FF 54
Query: 129 EGAAILVSVIVVVLVTAFND-YSKEKQFRGLQNQIEGEHKFA-VIRQN-ELKQIFVGDIV 185
+ +A+L I +L+ + + +K + L + + A ++ + E++++ V +
Sbjct: 55 DASAML---ITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQ 111
Query: 186 VGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSG 245
GDI ++ G+ +P DG +I+ ++DES +TGES V K ++ DP V++GT GS
Sbjct: 112 PGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPK-KVGDP-VIAGTVNGTGSL 168
Query: 246 KMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKH 305
+ TA G ++ I L+ + +Q K
Sbjct: 169 VVRATATGEDTTLAQIVRLV-----RQAQQSK---------------------------- 195
Query: 306 DEKKSVLQAKLTKLAIQIG----YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFRE 361
A + +LA ++ IA++T VI W I +
Sbjct: 196 --------APIQRLADKVAGYFVPVVIAIALITFVI----------------W-LILGAD 230
Query: 362 FVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSD 421
FV V VTVL++A P L LA +A + K+ L++ DA E N + D
Sbjct: 231 FVFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 290
Query: 422 KTGTLTTNRMTAV 434
KTGTLT + T
Sbjct: 291 KTGTLTQGKPTVT 303
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 2e-17
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 43/168 (25%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
VI ++D V+P + E + ++ GI M+TGDN TA +IA + G+ +D++
Sbjct: 441 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----DDFI------ 490
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
A ++P DK L++ + A +VA+TGDG
Sbjct: 491 ---------------------------AEATPEDKLALIR-----QEQAEGRLVAMTGDG 518
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGR 800
TND PAL +ADVG AM +GT AKEA++++ D N + +++ V G+
Sbjct: 519 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 82.5 bits (205), Expect = 6e-16
Identities = 53/158 (33%), Positives = 78/158 (49%), Gaps = 43/158 (27%)
Query: 631 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 690
L VI ++D V+P + E + ++ GI M+TGDN TA +IA + G+ +D+L
Sbjct: 437 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----DDFL---- 488
Query: 691 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 750
A ++P DK L++ + A +VA+TG
Sbjct: 489 -----------------------------AEATPEDKLALIR-----QEQAEGRLVAMTG 514
Query: 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788
DGTND PAL +ADVG AM +GT AKEA +++ D N
Sbjct: 515 DGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 2e-15
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLI 95
V E+ +L T +GL ++ + E R E +G N +P K K+ ++ +D +I
Sbjct: 3 TLSVEEVLARLGTDLEKGL--TEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 96 ILEIAALVS 104
IL IAA+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 78.8 bits (194), Expect = 9e-15
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 44/196 (22%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
VI ++D V+ + E + ++ GI M+TGDN TA +IA + G+ +D++
Sbjct: 440 VIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----DDFI------ 489
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
A ++P DK L++ + A ++VA+TGDG
Sbjct: 490 ---------------------------AEATPEDKIALIR-----QEQAEGKLVAMTGDG 517
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 812
TND PAL +ADVG AM +GT AKEA++++ D + + +++ V G+ + + F
Sbjct: 518 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576
Query: 813 QLTVNVVAVIVAFIGA 828
+ N VA A I A
Sbjct: 577 SIA-NDVAKYFAIIPA 591
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 1e-13
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 45/153 (29%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
+I ++D +R + +AI + + GI M+TGDN A +IA + GI D+
Sbjct: 562 LIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-----DF------- 609
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
+ LL P DK V ++++ +A+ GDG
Sbjct: 610 ------------RAGLL--------------PEDKVKAV-----TELNQ-HAPLAMVGDG 637
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILT 785
ND PA+K A +G AMG +GTDVA E +D LT
Sbjct: 638 INDAPAMKAASIGIAMG-SGTDVALETADAALT 669
|
Length = 741 |
| >gnl|CDD|152858 pfam12424, ATP_Ca_trans_C, Plasma membrane calcium transporter ATPase C terminal | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-13
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 1047 ILWLRGLTRLQTQLRVIRAFKSNLEDLEERR---SAQSLRSARSQLGNQR---PLSDITY 1100
ILW+RGLTRLQTQ+RV++AF+S L+ E R S S+ S S LS I
Sbjct: 3 ILWIRGLTRLQTQIRVVKAFRSGLDAREGIRKPTSLASIHSFMSPGPEFAIRDELSRIPL 62
Query: 1101 IDE 1103
+DE
Sbjct: 63 LDE 65
|
This domain family is found in eukaryotes, and is approximately 60 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved QTQ sequence motif. This family is the C terminal of a calcium transporting ATPase located in the plasma membrane. Length = 67 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-13
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 43/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
++ I DP+R + A+++ +AG + M+TGDN TA +IA + GI
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------- 690
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
V+A P K +K + S GR+V A+ GDG
Sbjct: 691 ------------------------EVIAGVLPDGKAEAIKRLQ----SQGRQV-AMVGDG 721
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND PAL +ADVG AMG G+DVA E + I L + + A+
Sbjct: 722 INDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 3e-11
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 49/215 (22%)
Query: 621 ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK 680
E N + L VI ++D ++ + E ++ + GI M TGDN TA +IA + G+
Sbjct: 428 EDNEI-----LGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD- 481
Query: 681 PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS 740
R +A P DK +++ +
Sbjct: 482 ------------------------------------RFVAECKPEDKINVIR-----EEQ 500
Query: 741 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGR 800
A +VA+TGDGTND PAL +A+VG AM +GT AKEA+++I D N + +++ V+ G+
Sbjct: 501 AKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGK 559
Query: 801 NVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP 835
+ + F + N +A A + A + P
Sbjct: 560 QLLMTRGSLTTFSIA-NDIAKYFAILPAMFMAAMP 593
|
Length = 673 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 3e-11
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 41 EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIA 100
E+ ++L T +GL S + R E +G N +PP + L + + IL A
Sbjct: 11 EVLERLQTDLEKGL--SSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAA 68
Query: 101 ALVSLGL 107
A++S L
Sbjct: 69 AVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 6e-09
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 55 GGSQTDLEHRREVFGSN-IIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG 113
G ++ D R + +G N + KP +QL+ +A + + +L + A +S ++ P
Sbjct: 45 GLTEEDAAERLQRYGPNEVAHEKPPHALVQLL-QAFNNPFIYVLMVLAAISFFTDYWLP- 102
Query: 114 GESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIR- 172
EET + IL V++ L+ + ++ K L+ + V+R
Sbjct: 103 ---LRRGEET--DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA--TVLRR 155
Query: 173 -----QNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKK- 226
+ ++I + ++V GDI + GD++PAD LI+S DL I ++ LTGE+ V+K
Sbjct: 156 GHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKY 215
Query: 227 ------------------GELFD--PMVLSGTHVMEGSGKMVVTAVG 253
G L D + GT+V+ G+ VV A G
Sbjct: 216 DTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262
|
Length = 903 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-08
Identities = 92/405 (22%), Positives = 154/405 (38%), Gaps = 131/405 (32%)
Query: 170 VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGEL 229
+R E +++ + D+ GD+ ++ G LPADG L+ S DES+LTGES V++
Sbjct: 247 RLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-SPFASFDESALTGESIPVER--- 302
Query: 230 FDPMVLSGTHVMEGSGKMVVTAV---GVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRD 286
+G V G+ V + V S+ G
Sbjct: 303 -----ATGEKVPAGA--TSVDRLVTLEVLSEPG--------------------------- 328
Query: 287 EESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKK 346
SAI+ I + +E AE E+++ ++ + + + +I Y + + + +VIL+
Sbjct: 329 -ASAIDRI-LHLIEEAE---ERRAPIERFIDRFS-RI-YTPAIMLVALLVILVPPLL--- 378
Query: 347 FVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGL----PLAVTLSLAYSVKKMMKDNNL 402
F +EW IY G+T+L++ P L P A+T LA + ++ L
Sbjct: 379 FAAPWQEW--IY---------RGLTLLLIGCPCALVISTPAAITSGLAAAARR----GAL 423
Query: 403 VRHLDACETMGNATAICSDKTGTLT--TNRMTAV-------------------------- 434
++ A E +G T + DKTGTLT ++T +
Sbjct: 424 IKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAVEQGSTHPL 483
Query: 435 -QAYVCEVQYKNIPKYEDIPEDIASKIVEGISVN---SGYTSKIMAPENANELPKQV--- 487
QA V E Q + + IPE + + + G + +G I AP L
Sbjct: 484 AQAIVREAQVRGLA----IPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQ 539
Query: 488 ------GNKTECALLGFVVAIGKNYQ---------TVRDDLPEEV 517
KT VV + +N T+R D + +
Sbjct: 540 INELESAGKT-------VVLVLRNDDVLGLIALQDTLRADARQAI 577
|
Length = 741 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 9e-08
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 45/253 (17%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIP-PKPSKTFLQLVWEALQDVTLIIL 97
E+ K T P EGL ++ + RE G N +P KP ++ L W ++ I+L
Sbjct: 54 EEELWKTFDTHP-EGLNEAEVES--AREQHGENELPAQKPLPWWVHL-WVCYRNPFNILL 109
Query: 98 EIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRG 157
I +S E+ AA +++++V + T N + +E +
Sbjct: 110 TILGAISYA-------------TEDLF------AAGVIALMVA-ISTLLN-FIQEARSTK 148
Query: 158 LQNQIEG--EHKFAVIRQNELK------QIFVGDIVVGDICQIKYGDLLPADGILIQSND 209
+ ++ + V+R K +I + +V GDI ++ GD++PAD ++Q+ D
Sbjct: 149 AADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD 208
Query: 210 LKIDESSLTGESDHVKK----GELF-------DPMVLSGTHVMEGSGKMVVTAVGVNSQA 258
L + ++SLTGES V+K + D + GT+V+ G+ + VV A G N+
Sbjct: 209 LFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWF 268
Query: 259 GIIFTLLGATDDE 271
G + + D E
Sbjct: 269 GQLAGRVSEQDSE 281
|
Length = 902 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 3e-07
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 24/187 (12%)
Query: 48 TSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGL 107
T G + D+ R+ +G N I P +FL+L+ E + + + ++ L
Sbjct: 132 TCAGHSNGLTTGDIAQRKAKYGKNEIE-IPVPSFLELLKEEVLHPFYVFQVFSVILWLLD 190
Query: 108 SFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHK 167
+Y+ Y + +V + + + Y KQ + L++ +
Sbjct: 191 EYYY-------------Y-----SLCIVFMSSTSISLSV--YQIRKQMQRLRDMVHKPQS 230
Query: 168 FAVIRQNELKQIFVGDIVVGDICQIKY--GDLLPADGILIQSNDLKIDESSLTGESDHVK 225
VIR + I ++V GDI I +P D +L+ ++ES LTGES V
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVL 289
Query: 226 KGELFDP 232
K + D
Sbjct: 290 KFPIPDN 296
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 31/145 (21%)
Query: 619 DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 678
V L L +I + DP+ P EA+K+ + AGI + ++TGDN TA +IA G+
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL 133
Query: 679 VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSK 738
D L+ + K P++ LA +
Sbjct: 134 ----FDALVS------------ADLYGLVGVGKPDPKIFELAL---------------EE 162
Query: 739 ISAGREVVAVTGDGTNDGPALKKAD 763
+ E V + GDG ND PA K A
Sbjct: 163 LGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-06
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 521 VYTFNSVRKSMSTVI--PKKNGYRVYTKGASEIILKKCSYIYGRN------GHLEKFTKD 572
++ F+S RK MS ++ P K +V+ KGA + N HL ++
Sbjct: 608 LHEFDSDRKRMSVILGCPDKT-VKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSL 666
Query: 573 MQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDD-----------E 621
GLRT+ + ++ + +E Q H +
Sbjct: 667 ----------------GLRTLVVGMREL--NDSEFEQWHFSFEAASTALIGRAALLRKVA 708
Query: 622 SNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSI 672
SN+ ++LT L IED ++ VPEAI+ + AGI + ++TGD TA SI
Sbjct: 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-05
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 67/257 (26%)
Query: 177 KQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLS 236
K + + D+ G + ++ GD +P DG + Q + +DE+ LTGE +KGE V +
Sbjct: 334 KSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIPQQKGE--GDSVHA 390
Query: 237 GTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKK--KKRDEESAIEAI 294
GT V +GS +AVG ++ I + V+Q + K + + D+ SA+
Sbjct: 391 GTVVQDGSVLFRASAVGSHTTLSRIIRM--------VRQAQSSKPEIGQLADKISAV--- 439
Query: 295 DMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW 354
PV V IA+++ I W
Sbjct: 440 -FVPVVVV---------------------------IALVSAAI----------------W 455
Query: 355 KAIYF----REFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACE 410
YF + V ++ TVL++A P L LA +S+ V + + LVR DA +
Sbjct: 456 ---YFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQ 512
Query: 411 TMGNATAICSDKTGTLT 427
+ DKTGTLT
Sbjct: 513 RASTLDTLVFDKTGTLT 529
|
Length = 834 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 743 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
EV+A GD TND L+ A +G AMG + KE +D + T ++ + +A+
Sbjct: 206 EEVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEAL 257
|
Length = 264 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 785
K + ++ + + + E V GDG ND L+ A G AMG + K +D + T
Sbjct: 188 SKGSALQSLAE-ALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYV-T 244
Query: 786 DDN 788
D N
Sbjct: 245 DSN 247
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 618 WDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG 677
D E I E + P V EA+K+ + GI + + T + + + G
Sbjct: 11 LDSEPGIAEIE--------ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELG 62
Query: 678 IVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS-DKYTLVKGMID 736
+ D +I +NG + ++ P+ DK ++
Sbjct: 63 LDDY-FDPVI-----------TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG 110
Query: 737 SKISAGREVVAVTGDGTNDGPALKKA-DVGFAM 768
EV+ V GD ND K A +G A+
Sbjct: 111 VDPE---EVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 20/101 (19%)
Query: 134 LVSVIVVVLVT----AFNDYSKEKQFRGLQNQ----IEGEHKFAVIRQNELKQIFVGDIV 185
+V + V++VT A D + ++ + + N+ +EG +F I D+
Sbjct: 54 IVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK--------DLR 105
Query: 186 VGDICQIKYGDLLPADGILIQSNDLK----IDESSLTGESD 222
VGDI ++K + +PAD +L+ S++ ++ ++L GE++
Sbjct: 106 VGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETN 146
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1119 | |||
| KOG0204|consensus | 1034 | 100.0 | ||
| KOG0202|consensus | 972 | 100.0 | ||
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208|consensus | 1140 | 100.0 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0210|consensus | 1051 | 100.0 | ||
| KOG0205|consensus | 942 | 100.0 | ||
| KOG0209|consensus | 1160 | 100.0 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0207|consensus | 951 | 100.0 | ||
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.9 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.84 | |
| KOG4383|consensus | 1354 | 99.84 | ||
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.45 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.36 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.32 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.16 | |
| PF12424 | 66 | ATP_Ca_trans_C: Plasma membrane calcium transporte | 99.16 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.09 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.01 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.99 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.96 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.96 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.95 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.93 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.89 | |
| PLN02887 | 580 | hydrolase family protein | 98.85 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.79 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.79 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.69 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.65 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.64 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.63 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.63 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.56 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.49 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.47 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.47 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.23 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.22 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.2 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.15 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.1 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.95 | |
| KOG1615|consensus | 227 | 97.91 | ||
| PLN02954 | 224 | phosphoserine phosphatase | 97.88 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.87 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.87 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.84 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.79 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.76 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.68 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.67 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.6 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.58 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.56 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.51 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.51 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.5 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.43 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.35 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.27 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.24 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.06 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.04 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.01 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.95 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.93 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.73 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.73 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.72 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.63 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.52 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.29 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.28 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.27 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.1 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 95.97 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.88 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.73 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.72 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.71 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.68 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.48 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.35 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.93 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.78 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.78 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 94.74 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.74 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.7 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.68 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.66 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.58 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.51 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.37 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.27 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.19 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.12 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.01 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.97 | |
| KOG3120|consensus | 256 | 93.76 | ||
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.66 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.6 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.56 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.31 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.24 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.13 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.98 | |
| PLN02940 | 382 | riboflavin kinase | 92.79 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.64 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.57 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.65 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.57 | |
| PLN02811 | 220 | hydrolase | 91.55 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 91.45 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.4 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.2 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.17 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.12 | |
| PLN02423 | 245 | phosphomannomutase | 90.85 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.92 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 89.78 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 89.73 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.73 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 89.01 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.52 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.03 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 86.96 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 86.06 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 85.34 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.81 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 81.85 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 80.68 |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-224 Score=1909.08 Aligned_cols=948 Identities=61% Similarity=0.963 Sum_probs=894.4
Q ss_pred CCCccccCHHHHHHHHHhc---------------------------Ch--hhHHHHH---------hhCCHHHHHHHhCC
Q psy10301 7 RPTQYGITLRQLRELMEVR---------------------------GR--EGIAKIN---------EYGGVPEICKKLYT 48 (1119)
Q Consensus 7 ~~~~~~~~~~~l~~~~~~~---------------------------~~--~~~~~~~---------~~~~~~~l~~~l~t 48 (1119)
+..+|++++++++++|+.| +. |++.++. .|||+++||++|+|
T Consensus 33 ~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~~~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt 112 (1034)
T KOG0204|consen 33 RRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYTLGIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKT 112 (1034)
T ss_pred hhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccccccCHHHHHHHhhccchhhhhhccCHHHHHHHhcc
Confidence 4468889999999999888 54 6666553 45999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhh
Q psy10301 49 SPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWI 128 (1119)
Q Consensus 49 ~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~ 128 (1119)
|+..||+++++|+++||+.||+|.+|++++|+||+++||+++|.+++||.+||++|+++++|.++.. .+|+
T Consensus 113 ~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~---------~GW~ 183 (1034)
T KOG0204|consen 113 DPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIE---------DGWI 183 (1034)
T ss_pred CcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCC---------cccc
Confidence 9999999999999999999999999999999999999999999999999999999999999987543 3799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeC
Q psy10301 129 EGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSN 208 (1119)
Q Consensus 129 e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~ 208 (1119)
||++|+++++++++++|++||++++||++|+ +++.+.++.|+|||+.++|++.|||||||+.|+.||.+||||++++|+
T Consensus 184 eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~-~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 184 EGVAILLSVILVVLVTAVNDYRQELQFRKLQ-KEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred cchhheeeEEEEEEEeecchhHHhhhhhhhh-hhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 9999999999999999999999999999999 556689999999999999999999999999999999999999999999
Q ss_pred ceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccc
Q psy10301 209 DLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEE 288 (1119)
Q Consensus 209 ~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~ 288 (1119)
++++|||+|||||++++|....||+|+|||++++|+|+|+||+||+||+.|++++++++..
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~------------------- 323 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGG------------------- 323 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999999998653
Q ss_pred hhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccc---hhHHHHHHHHHHH
Q psy10301 289 SAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE---EWKAIYFREFVRF 365 (1119)
Q Consensus 289 ~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~---~~~~~~~~~~~~~ 365 (1119)
.++||||.+|+++|.+|++++++++++++++++++|+...+..++. .|...+.+.|+++
T Consensus 324 ------------------~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 324 ------------------EEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred ------------------CcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998877655 5677789999999
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeec
Q psy10301 366 FMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKN 445 (1119)
Q Consensus 366 ~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 445 (1119)
|+++++++|+|||||||+|||+++||+++||++||+||||++||||||++|+||+|||||||+|+|+|++.|+++.+|+.
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred -CCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecC
Q psy10301 446 -IPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTF 524 (1119)
Q Consensus 446 -~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F 524 (1119)
.++...+++.+.+++.++++.|++ +.++++++.+..+++.|||||||||+|+.++|.+|+.+| ++.++.++|||
T Consensus 466 ~~~~~~~l~~~~~~ll~~gI~~Nt~--g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R---~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPKSSNLPPSLLDLLLQGIAQNTT--GSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVR---PEEKVVKVYPF 540 (1034)
T ss_pred cCcccccCCHHHHHHHHHHHhhcCC--CeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhc---chhheeEEecc
Confidence 333246899999999999999984 567788877779999999999999999999999999988 67789999999
Q ss_pred CCCcceEEEEEec-CCe-eEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeeccc
Q psy10301 525 NSVRKSMSTVIPK-KNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 602 (1119)
Q Consensus 525 ~s~rk~msvvv~~-~~~-~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~ 602 (1119)
||.||+|+++++. +++ | +|+|||+|+|+++|+++++.+|+..+++++.+. .++++|++||++||||+|+|||++.+
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~-~~~~~Ie~mA~~~LRti~lAy~df~~ 618 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK-SFKDVIEPMASEGLRTICLAYRDFVA 618 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHH-HHHHHHHHHHHhhhheeeEEeecccc
Confidence 9999999999997 555 5 999999999999999999999999999998888 67899999999999999999999876
Q ss_pred chhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCC
Q psy10301 603 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG 682 (1119)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~ 682 (1119)
. +.++++|++++..+.+|+++|++||+||+||||++||+.||+|||+|+|+||||..||++||.+|||++++
T Consensus 619 ~--------~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~ 690 (1034)
T KOG0204|consen 619 G--------PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG 690 (1034)
T ss_pred C--------CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC
Confidence 5 23567788888889999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC
Q psy10301 683 EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762 (1119)
Q Consensus 683 ~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A 762 (1119)
+++++++|++|++ +++++.++++++++|+||++|.||+.+|+.+ +.+|++||++|||+||+||||+|
T Consensus 691 ~d~~~lEG~eFr~--------~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L-----~~~g~VVAVTGDGTNDaPALkeA 757 (1034)
T KOG0204|consen 691 GDFLALEGKEFRE--------LSQEERDKIWPKLRVLARSSPNDKHLLVKGL-----IKQGEVVAVTGDGTNDAPALKEA 757 (1034)
T ss_pred Cccceecchhhhh--------cCHHHHHhhhhhheeeecCCCchHHHHHHHH-----HhcCcEEEEecCCCCCchhhhhc
Confidence 9999999999985 4889999999999999999999999999998 46799999999999999999999
Q ss_pred CceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHH
Q psy10301 763 DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQML 842 (1119)
Q Consensus 763 dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L 842 (1119)
|||+|||++||++|||+||||++||||++|+++++|||++|+||+||+||||++|+++++++|+++|..+++||+++|||
T Consensus 758 DVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlL 837 (1034)
T KOG0204|consen 758 DVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLL 837 (1034)
T ss_pred ccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q psy10301 843 WVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLP 922 (1119)
Q Consensus 843 ~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1119)
|+|||||+|++||||+|||++++|+|+|++|++|||++.||+++++|++||++++|++.|.|..+|+. +.+.++++
T Consensus 838 WVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~----~~~~~~~~ 913 (1034)
T KOG0204|consen 838 WVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGL----NGPLHSPP 913 (1034)
T ss_pred HHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhcc----CCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999973 34556678
Q ss_pred cchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhccccceecccChhhHHHHHHHH
Q psy10301 923 TQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFG 1002 (1119)
Q Consensus 923 ~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~ 1002 (1119)
.+++|++||+||+||+||++|+|++| ++|+|+++++|++|++++.+++++|+++++|+|.+|++++|++.||+||+++|
T Consensus 914 ~~~nTiIFNtFV~~qvFNEinaRki~-~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g 992 (1034)
T KOG0204|consen 914 SVHNTIIFNTFVFCQVFNEINARKID-ERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIG 992 (1034)
T ss_pred hhheeeehhHHHHHHHHHHHhhcchh-HHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHH
Confidence 89999999999999999999999999 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcCccccccCCCCCcch
Q psy10301 1003 VGTLVWQQIVTTVPTKRLPKIFSWGRGQPESE 1034 (1119)
Q Consensus 1003 ~~~l~~~~~vk~i~~~~~~~~~~~~~~~~~~~ 1034 (1119)
+++++|++++|.+|.+..|+..+++..+..++
T Consensus 993 ~~sl~~g~~ik~iP~~~~~~~~~~~~~~~~~~ 1024 (1034)
T KOG0204|consen 993 VLSLPWGQLLKCIPVSSLPKLKYAGLGGSKFS 1024 (1034)
T ss_pred HHHHHHHHHheeccccccccceeeccCccccc
Confidence 99999999999999999999999987765443
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-157 Score=1361.43 Aligned_cols=892 Identities=32% Similarity=0.497 Sum_probs=757.2
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
-+++|++..|.||+++||+ ++|+.+||++||.|+++....+++|+++++||.|+...+|+++|++|+.+..
T Consensus 7 ~~v~e~~~~f~t~~~~GLt--~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLT--SDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCC--HHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4789999999999999999 8999999999999999999999999999999999999999999999999876
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCC
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGD 196 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd 196 (1119)
|.|++.|++++++++.|+.|++|+.||.+++|++.. ++.++|+|+|+.+.+++.||||||||.++.||
T Consensus 78 ----------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~--p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGD 145 (972)
T KOG0202|consen 78 ----------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELV--PPMAHVLRSGKLQHILARELVPGDIVELKVGD 145 (972)
T ss_pred ----------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcC--CccceEEecCcccceehhccCCCCEEEEecCC
Confidence 678999999999999999999999999999998864 67899999999999999999999999999999
Q ss_pred eecccEEEEeeCceEEecccCCCCCcccccCC------------CCCccccccceeeecceEEEEEEecccchhhHHHHh
Q psy10301 197 LLPADGILIQSNDLKIDESSLTGESDHVKKGE------------LFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTL 264 (1119)
Q Consensus 197 ~vPaDgill~g~~l~VDES~LTGES~pv~K~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~l 264 (1119)
+||||.+|++..++.||||+|||||.|+.|.. ++.|++|+||.|..|.++++|++||.||++|+|.+.
T Consensus 146 kVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 146 KIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 99999999999999999999999999999954 246899999999999999999999999999999998
Q ss_pred hcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10301 265 LGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCV 344 (1119)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~ 344 (1119)
+.+.+ ..+||||++++.+..++.++..++++.+.++-+.+|.
T Consensus 226 m~~~e-------------------------------------~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~- 267 (972)
T KOG0202|consen 226 MQATE-------------------------------------SPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL- 267 (972)
T ss_pred HhccC-------------------------------------CCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-
Confidence 87653 6799999999999999986655555444433233332
Q ss_pred hheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCC
Q psy10301 345 KKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424 (1119)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTG 424 (1119)
...++.+| +.....+|.+++++.|+|||||||..+|+++|.+++||+|+|.+||+++++|+||.+++|||||||
T Consensus 268 --~p~~~g~~----fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTG 341 (972)
T KOG0202|consen 268 --DPVHGGSW----FKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTG 341 (972)
T ss_pred --cccccccc----hhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCC
Confidence 11233334 234467889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEEEEEcCeEeecC-----------CC------------CCCCChHHHHHHHHHHHhccCCccccccCCCCC
Q psy10301 425 TLTTNRMTAVQAYVCEVQYKNI-----------PK------------YEDIPEDIASKIVEGISVNSGYTSKIMAPENAN 481 (1119)
Q Consensus 425 TLT~n~m~v~~~~~~~~~~~~~-----------~~------------~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~ 481 (1119)
|||+|+|++.++|+.+..+... +. .....+.+.+++..+..||.+.. ..+..
T Consensus 342 TLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v----~~~~~- 416 (972)
T KOG0202|consen 342 TLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATV----EYNDA- 416 (972)
T ss_pred cccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhh----hcCch-
Confidence 9999999999999876543321 00 01122334455555555554432 11112
Q ss_pred CCcccccChhHHHHHHHHHHcCCChhhhhhc-----------CC-ccceeeeecCCCCcceEEEEEec-C--CeeEEEEe
Q psy10301 482 ELPKQVGNKTECALLGFVVAIGKNYQTVRDD-----------LP-EEVFTRVYTFNSVRKSMSTVIPK-K--NGYRVYTK 546 (1119)
Q Consensus 482 ~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~-----------~~-~~~i~~~~~F~s~rk~msvvv~~-~--~~~~l~~K 546 (1119)
+..+..|.|||.||..++.+++..-...... +. ..+-...+||+|+||+|||.+.+ . .++.+|+|
T Consensus 417 ~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvK 496 (972)
T KOG0202|consen 417 DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVK 496 (972)
T ss_pred hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEec
Confidence 5566799999999999999987644321111 00 11334789999999999999987 2 35899999
Q ss_pred CccHHHHhhcccccccCC-eeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccc
Q psy10301 547 GASEIILKKCSYIYGRNG-HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIV 625 (1119)
Q Consensus 547 GA~e~il~~c~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie 625 (1119)
||+|.|+++|+.++..+| ...|+++..|+.+. +...+|+++|||||++|+++.+....+. ....+..++...|
T Consensus 497 GA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il-~~~~~~g~~gLRvLalA~~~~~~~~~~~-----~~l~~~s~~~~~E 570 (972)
T KOG0202|consen 497 GAPESVLERCSTYYGSDGQTKVPLTQASRETIL-ANVYEMGSEGLRVLALASKDSPGQVPDD-----QDLNDTSNRATAE 570 (972)
T ss_pred CChHHHHHhhhcEEccCCceeeeCcHHHHHHHH-HHHHHHhhccceEEEEEccCCcccChhh-----hhhcccccccccc
Confidence 999999999988887776 55999999999886 5678999999999999999887411100 0111223456789
Q ss_pred cCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCc--eEEEecHhHHHHhhcCchh
Q psy10301 626 SHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEGKEFNRRVRDNNGE 703 (1119)
Q Consensus 626 ~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~--~i~l~g~~~~~~~~~~~~~ 703 (1119)
+||+|+|++||.||+|+||+++|+.|++|||+|+|+||||..||.+||+++||...+++ .-+++|++|+.+
T Consensus 571 ~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l------- 643 (972)
T KOG0202|consen 571 SDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL------- 643 (972)
T ss_pred cceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC-------
Confidence 99999999999999999999999999999999999999999999999999999877664 357899999865
Q ss_pred hhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCee
Q psy10301 704 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 783 (1119)
Q Consensus 704 ~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDii 783 (1119)
++++++....+..+|+|++|++|.+||+.| |+.|++|+|+|||.||+||||+||||||||++|||+||+|||+|
T Consensus 644 -s~~~~~~~~~~~~vFaR~~P~HK~kIVeaL-----q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMV 717 (972)
T KOG0202|consen 644 -SDEELDDAVRRVLVFARAEPQHKLKIVEAL-----QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMV 717 (972)
T ss_pred -CHHHHHHHhhcceEEEecCchhHHHHHHHH-----HhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcE
Confidence 667778888899999999999999999997 77899999999999999999999999999999999999999999
Q ss_pred eccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCc
Q psy10301 784 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTP 863 (1119)
Q Consensus 784 l~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~ 863 (1119)
|.||||++|+.|+++||.+|+||++|+.|+++.|+.++.+.|+++.+..+.||.|+|+||+|++||.+||.+|+.|||++
T Consensus 718 L~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~ 797 (972)
T KOG0202|consen 718 LADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDP 797 (972)
T ss_pred EecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC--CCC-------------CCCcchhhh
Q psy10301 864 DLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGA--EYG-------------SLPTQHFTI 928 (1119)
Q Consensus 864 ~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~t~ 928 (1119)
++|+|||+++++++|+.+.+.+++..|+|-.+.....+.+-....+-.-.+.. .++ .......||
T Consensus 798 DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tM 877 (972)
T KOG0202|consen 798 DIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTM 877 (972)
T ss_pred hHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceE
Confidence 99999999999999999999999999988765443333221110000000000 000 011234589
Q ss_pred hHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHHHHHHhhc--cccceecccChhhHHHHHHHHHHH
Q psy10301 929 IFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSLTLEQWGWCLFFGVGT 1005 (1119)
Q Consensus 929 ~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l~~~~w~~~~~~~~~~ 1005 (1119)
+|..||+.-+||.+|+|+.. ..+|. ++|+|+||++++.+++++|++++|++ ..+|++.||++.+|+..+.+...+
T Consensus 878 a~tv~V~~emfNaL~~~se~--~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V 955 (972)
T KOG0202|consen 878 ALTVLVFIEMFNALNCLSEN--KSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPV 955 (972)
T ss_pred EEeehhHHHHHHHhhcccCC--cceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhh
Confidence 99999999999999999865 35666 99999999999999999999998877 589999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy10301 1006 LVWQQIVTTVPTKR 1019 (1119)
Q Consensus 1006 l~~~~~vk~i~~~~ 1019 (1119)
++++|++|++.+++
T Consensus 956 ~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 956 IIVDEILKFIARNY 969 (972)
T ss_pred hhHHHHHHHHHHhc
Confidence 99999999998765
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-146 Score=1404.05 Aligned_cols=928 Identities=52% Similarity=0.794 Sum_probs=795.4
Q ss_pred cCCCCccccCHHHHHHHHHhcChhhHHHHHhhCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHH
Q psy10301 5 DGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQL 84 (1119)
Q Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l 84 (1119)
++..+.|++..+++.++++.++ ..+.++.|||++++++.|+||.++||+++++|+++|+++||+|++++++++++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~ 89 (941)
T TIGR01517 12 DNFTDGFDVGVSILTDLTDIFK--RAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQI 89 (941)
T ss_pred hccCCCCCCCHHHHHHhcCchh--hHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 3457899999999999997643 23556779999999999999999999987889999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcC
Q psy10301 85 VWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEG 164 (1119)
Q Consensus 85 ~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~ 164 (1119)
++++|+++++++|++++++|++++++.|.. ...++..+|+++++|+++++++++++++++|++++++++|+++. +
T Consensus 90 ~~~~f~~~~~~~l~~~ails~~~~~~~~~~----~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~-~ 164 (941)
T TIGR01517 90 VWAALSDQTLILLSVAAVVSLVLGLPEPGE----GKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREK-S 164 (941)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHhhccccc----ccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcc-C
Confidence 999999999999999999999988664321 12233457999999999999999999999999999999997643 4
Q ss_pred CCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecc
Q psy10301 165 EHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGS 244 (1119)
Q Consensus 165 ~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~ 244 (1119)
+.+++|+|||++++|+++||||||||.|++||.|||||++++|+++.||||+|||||.|+.|.++.+|++|+||.|.+|+
T Consensus 165 ~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~ 244 (941)
T TIGR01517 165 AQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGS 244 (941)
T ss_pred CCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeE
Confidence 67899999999999999999999999999999999999999997899999999999999999988888999999999999
Q ss_pred eEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHH
Q psy10301 245 GKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIG 324 (1119)
Q Consensus 245 ~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~ 324 (1119)
++++|++||.+|+.|+|..++..+ .+++|+|+++++++.++.
T Consensus 245 ~~~iV~~tG~~T~~gki~~~~~~~--------------------------------------~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 245 GRMLVTAVGVNSFGGKLMMELRAE--------------------------------------GEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EEEEEEEeCCCcHHHHHHHhhccC--------------------------------------CCCCcHHHHHHHHHHHHH
Confidence 999999999999999999877532 246799999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcccccc
Q psy10301 325 YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVR 404 (1119)
Q Consensus 325 ~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr 404 (1119)
++.+++++++++++++.+......... .........+...++.++++++++||||||+++|+++++++++|+|+|++||
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk 365 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDG-RDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVR 365 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccc-cccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEe
Confidence 887777776665544332221111000 0000112345677889999999999999999999999999999999999999
Q ss_pred chhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCc
Q psy10301 405 HLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484 (1119)
Q Consensus 405 ~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~ 484 (1119)
+++++|+||++|+||||||||||+|+|+|++++..+..+.........++...+.+..++++|+.+... . +..+..
T Consensus 366 ~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~---~-~~~~~~ 441 (941)
T TIGR01517 366 HLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEV---V-DRGGKR 441 (941)
T ss_pred chHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccc---c-CCCCcc
Confidence 999999999999999999999999999999999876544332111122344556667777777654311 0 111223
Q ss_pred ccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccC
Q psy10301 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRN 563 (1119)
Q Consensus 485 ~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~ 563 (1119)
+..|||+|+|++.++.+.+.++...+.. ++..+.+||+|+||+|+++++. ++++++|+|||||.|+++|+.+...+
T Consensus 442 ~~~g~p~e~All~~~~~~~~~~~~~~~~---~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~ 518 (941)
T TIGR01517 442 AFIGSKTECALLGFLLLLGRDYQEVRAE---EKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSN 518 (941)
T ss_pred ccCCCccHHHHHHHHHHcCCCHHHHHhh---chhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcC
Confidence 5679999999999998888776655443 3456789999999999999987 55699999999999999999876667
Q ss_pred CeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCcc
Q psy10301 564 GHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPE 643 (1119)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~ 643 (1119)
|...++++ .++++ ++.++.|+++|+||+++|||+++.++.. ..+..|+||+|+|+++++||+||+
T Consensus 519 g~~~~~~~-~~~~i-~~~~~~~a~~G~Rvl~~A~~~~~~~~~~-------------~~~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 519 GEATPISD-DKDRC-ADVIEPLASDALRTICLAYRDFAPEEFP-------------RKDYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred CCcccCcH-HHHHH-HHHHHHHHhcCCEEEEEEEEecCccccc-------------cccccccCcEEEEEeeccCCCchh
Confidence 77777776 55444 5678899999999999999998643211 112347899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecC
Q psy10301 644 VPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 723 (1119)
Q Consensus 644 v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~s 723 (1119)
++++|++|+++||+++|+|||++.||.+||++|||.+++. .+++|++++.+ .++++++++.+..||||++
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~~~l--------~~~el~~~i~~~~Vfar~s 653 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEFRRL--------VYEEMDPILPKLRVLARSS 653 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHhhhC--------CHHHHHHHhccCeEEEECC
Confidence 9999999999999999999999999999999999986544 58899998764 4567788888999999999
Q ss_pred hhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHH
Q psy10301 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 803 (1119)
Q Consensus 724 P~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~ 803 (1119)
|+||.++|+.+ |+.|++|+|+|||+||+||||+||||||||++|+|+|+++||++++||+|++|+++++|||++|
T Consensus 654 Pe~K~~iV~~l-----q~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~ 728 (941)
T TIGR01517 654 PLDKQLLVLML-----KDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVY 728 (941)
T ss_pred HHHHHHHHHHH-----HHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999997 5678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHH
Q psy10301 804 DSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMM 883 (1119)
Q Consensus 804 ~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~ 883 (1119)
+||+|+++|++++|+..+++++++.+++.++||+++|+||+|+++|.+|+++|++|+|++++|++||+.++++++++.||
T Consensus 729 ~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~ 808 (941)
T TIGR01517 729 DNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMW 808 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhH
Q psy10301 884 KNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIF 963 (1119)
Q Consensus 884 ~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~ 963 (1119)
++|++++++++++.|++++++..+++...+..... ....+++|++|++|+++|+||.+++|+.+. .++|+++++|+++
T Consensus 809 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~-~~~~~~~~~n~~~ 886 (941)
T TIGR01517 809 KNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITS-HQQGELNTIVFNTFVLLQLFNEINARKLYE-RNVFEGLFKNRIF 886 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccc-cccchhhHHHHHHHHHHHHHHHHHHccCCc-ccccccccccHHH
Confidence 99999999999999988887766664432110000 113467899999999999999999999773 4788899999999
Q ss_pred HHHHHHHHHHHHHHHhhccccceecccChhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy10301 964 YSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPT 1017 (1119)
Q Consensus 964 ~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~ 1017 (1119)
+.++++++++|++++++++.+|++.|+++.+|++|++++++.++|.++.|++|.
T Consensus 887 ~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 887 VTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999974
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-140 Score=1344.69 Aligned_cols=913 Identities=27% Similarity=0.386 Sum_probs=729.0
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
-+++++++.|+||+.+||+ ++|+++||++||+|++++++++++|++++++|.+++.++|++||++|++++.
T Consensus 10 ~~~~~v~~~l~t~~~~GLs--~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~------- 80 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLT--HDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHD------- 80 (1053)
T ss_pred CCHHHHHHHhCcCcccCCC--HHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhh-------
Confidence 4679999999999989999 9999999999999999999999999999999999999999999999998743
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCC
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGD 196 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd 196 (1119)
|+++++|+++++++++++++++|+++|++++|+++. +.+++|+|||++++|+++||||||||.|++||
T Consensus 81 ----------~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~--~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd 148 (1053)
T TIGR01523 81 ----------WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA--SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGD 148 (1053)
T ss_pred ----------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC--CCceEEEeCCeeeecCHhhCCCCCEEEECCCC
Confidence 999999999999999999999999999999999875 46899999999999999999999999999999
Q ss_pred eecccEEEEeeCceEEecccCCCCCcccccCCC-------------CCccccccceeeecceEEEEEEecccchhhHHHH
Q psy10301 197 LLPADGILIQSNDLKIDESSLTGESDHVKKGEL-------------FDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFT 263 (1119)
Q Consensus 197 ~vPaDgill~g~~l~VDES~LTGES~pv~K~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ 263 (1119)
.|||||+|+++++++||||+|||||.|+.|.++ ..|++|+||.|.+|+|+++|++||.+|+.|+|..
T Consensus 149 ~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~ 228 (1053)
T TIGR01523 149 TIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAA 228 (1053)
T ss_pred EeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHH
Confidence 999999999999999999999999999999642 2479999999999999999999999999999999
Q ss_pred hhcCCchh--hHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 264 LLGATDDE--EVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQ 341 (1119)
Q Consensus 264 ll~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~ 341 (1119)
++...... ..++....+..... ..+. ...+.....--....+||||+++++++..++.++++++++++++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-- 302 (1053)
T TIGR01523 229 GLQGDGGLFQRPEKDDPNKRRKLN---KWIL-KVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-- 302 (1053)
T ss_pred HHhhhhhccccccccccccchhhh---cccc-cccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 88643210 00000000000000 0000 0000000000011246999999999998877666555544333110
Q ss_pred hhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeC
Q psy10301 342 YCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSD 421 (1119)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~D 421 (1119)
+ .+ ....++.+++++++++|||||+++|++++++++||+++|++||+++++|+||++|+||+|
T Consensus 303 -----~-----~~-------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsD 365 (1053)
T TIGR01523 303 -----F-----DV-------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSD 365 (1053)
T ss_pred -----h-----hh-------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEec
Confidence 0 01 123456788999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCeEEEEEEEcCe-EeecC-------CC------------------------C--------C--C-----CCh
Q psy10301 422 KTGTLTTNRMTAVQAYVCEV-QYKNI-------PK------------------------Y--------E--D-----IPE 454 (1119)
Q Consensus 422 KTGTLT~n~m~v~~~~~~~~-~~~~~-------~~------------------------~--------~--~-----~~~ 454 (1119)
||||||+|+|+|+++|.++. .+... +. . . + .++
T Consensus 366 KTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1053)
T TIGR01523 366 KTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMD 445 (1053)
T ss_pred CcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccH
Confidence 99999999999999998641 11100 00 0 0 0 001
Q ss_pred HHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChh------hhhhc----------------
Q psy10301 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQ------TVRDD---------------- 512 (1119)
Q Consensus 455 ~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~------~~~~~---------------- 512 (1119)
...+++..+..||++.. . .++.++.....|||+|+||+.++.+.|.++. ..+..
T Consensus 446 ~~~~ll~~~~lcn~a~~---~-~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 446 LFIKLLETAALANIATV---F-KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPG 521 (1053)
T ss_pred HHHHHHHHHHhccCCee---e-ccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccc
Confidence 12233333334443221 1 1111222345799999999999998886432 11111
Q ss_pred CCccceeeeecCCCCcceEEEEEecC-C-eeEEEEeCccHHHHhhcccccccCC-eeecCCHHHHHHHHHHHHHHHhhcc
Q psy10301 513 LPEEVFTRVYTFNSVRKSMSTVIPKK-N-GYRVYTKGASEIILKKCSYIYGRNG-HLEKFTKDMQGRLVRNVIEPMACDG 589 (1119)
Q Consensus 513 ~~~~~i~~~~~F~s~rk~msvvv~~~-~-~~~l~~KGA~e~il~~c~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~a~~G 589 (1119)
...++.++.+||||+||||+++++.+ + ++++|+|||||.|+++|+.+...+| ...+++++.++++ ++.++.|+++|
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i-~~~~~~~a~~G 600 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELI-IANMESLAAEG 600 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHH-HHHHHHHHhcC
Confidence 12346788999999999999999863 3 5899999999999999997765444 5678988888776 46789999999
Q ss_pred CceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy10301 590 LRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTA 669 (1119)
Q Consensus 590 lRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta 669 (1119)
+||||+|||.++.++...+. ++. ...+++++|+||+|+|+++++||+||+++++|++|+++||+|+|+|||++.||
T Consensus 601 lRvLa~A~r~l~~~~~~~~~--~~~--~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA 676 (1053)
T TIGR01523 601 LRVLAFASKSFDKADNNDDQ--LKN--ETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676 (1053)
T ss_pred CeEEEEEEEECCchhccchh--hhc--cccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 99999999998754221100 000 01123467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcCCCC--------ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCC
Q psy10301 670 RSIATKCGIVKPGE--------DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 741 (1119)
Q Consensus 670 ~~ia~~~Gi~~~~~--------~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~ 741 (1119)
.+||++|||.+++. ...+++|.+++.+ ++++++++..+..||||++|+||.++|+.+ |.
T Consensus 677 ~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l--------~~~~l~~~~~~~~V~ar~sP~~K~~iV~~l-----q~ 743 (1053)
T TIGR01523 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL--------SDEEVDDLKALCLVIARCAPQTKVKMIEAL-----HR 743 (1053)
T ss_pred HHHHHHcCCCCccccccccccccceeeehHHhhhc--------CHHHHHHHhhcCeEEEecCHHHHHHHHHHH-----Hh
Confidence 99999999975421 2368999998764 445666777778999999999999999997 55
Q ss_pred CCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHH
Q psy10301 742 GREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV 821 (1119)
Q Consensus 742 ~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i 821 (1119)
.|++|+|+|||+||+||||+||||||||++|+++|+++||++++||||++|++++.|||++|+||+|+++|+++.|+..+
T Consensus 744 ~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i 823 (1053)
T TIGR01523 744 RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEA 823 (1053)
T ss_pred cCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcc----C-CCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q psy10301 822 IVAFIGACAV----Q-DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 896 (1119)
Q Consensus 822 ~~~f~~~~~~----~-~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~ 896 (1119)
++.+++.++. . +.||+++|+||+|+++|.+|+++|++|||++++|+|||+.++++++++.++..++..+++.+++
T Consensus 824 ~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~ 903 (1053)
T TIGR01523 824 ILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGS 903 (1053)
T ss_pred HHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence 9999888773 2 4799999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHHHHHHhhccC--CC---C--CCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCcccccc--------------
Q psy10301 897 IFGILFFGDKLL--DI---P--TGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-------------- 955 (1119)
Q Consensus 897 ~~~~~~~~~~~~--~~---~--~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-------------- 955 (1119)
.+..+++....+ +. . ..++.+. ....+++|++|.+++++|++|.+++|+.+. ++|+
T Consensus 904 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~~~ 980 (1053)
T TIGR01523 904 CLASFTGILYGFGSGNLGHDCDAHYHAGC-NDVFKARSAAFATMTFCALILAVEVKDFDN--SFFNLHGIPDGDSNFKEF 980 (1053)
T ss_pred HHHHHHHHHHhccCccccccccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHhcCch--hhhhcCcccccccccccc
Confidence 665554221111 00 0 0000000 012357899999999999999999998653 3443
Q ss_pred --ccccchhHHHHHHHHHHHHHHHHhhc--c-ccceecccChhhHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10301 956 --GLFTNPIFYSIWVITMVSQVIIVQYG--G-IAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKR 1019 (1119)
Q Consensus 956 --~~~~n~~~~~~~~~~~~~~~~~v~~~--~-~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~~~ 1019 (1119)
++|+|+++++++++++++|++++++| + .+|++.|+++ +|++++.+++..+++.|+.|++.+++
T Consensus 981 ~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 981 FHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999998888766 3 3999999996 89999999999999999999886543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-137 Score=1315.51 Aligned_cols=894 Identities=26% Similarity=0.351 Sum_probs=735.7
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCC
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~ 115 (1119)
--+.++++++|+||+.+||+ ++|+++||++||+|++++++++++|++++++|.+++.++|++++++++++..+...+.
T Consensus 19 ~~~~~~~~~~l~t~~~~GLs--~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~ 96 (997)
T TIGR01106 19 KLSLDELERKYGTDLSKGLS--AARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTE 96 (997)
T ss_pred hCCHHHHHHHhCcCcccCCC--HHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccC
Confidence 35789999999999999999 9999999999999999999999999999999999999999999999887655432111
Q ss_pred CCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCC
Q psy10301 116 SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195 (1119)
Q Consensus 116 ~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~G 195 (1119)
.++....|+++++++++++++.+++.+++++.++..++|+++. +++++|+|||++++|+++||||||+|.|++|
T Consensus 97 ----~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~--~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~G 170 (997)
T TIGR01106 97 ----EEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMV--PQQALVIRDGEKMSINAEQVVVGDLVEVKGG 170 (997)
T ss_pred ----CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCeeEEEECCEEEEeeHHHCCCCCEEEECCC
Confidence 1122346999999999999999999999999999999998864 5789999999999999999999999999999
Q ss_pred CeecccEEEEeeCceEEecccCCCCCcccccCCCC--------CccccccceeeecceEEEEEEecccchhhHHHHhhcC
Q psy10301 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGELF--------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267 (1119)
Q Consensus 196 d~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~ 267 (1119)
|.|||||++++|+++.||||+|||||.|+.|.++. .|++|+||.|.+|+++++|++||.+|..|++..++..
T Consensus 171 d~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 171 DRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred CEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 99999999999988999999999999999997642 3589999999999999999999999999999987754
Q ss_pred CchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe
Q psy10301 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKF 347 (1119)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~ 347 (1119)
. +.+++|+|.++++++..+..+.++++++++++..+
T Consensus 251 ~-------------------------------------~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 286 (997)
T TIGR01106 251 L-------------------------------------ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI------- 286 (997)
T ss_pred c-------------------------------------ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3 24579999999999998877665555443332211
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccc
Q psy10301 348 VIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 427 (1119)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT 427 (1119)
.+.+| ...+..++++++++||||||+++++++++++++|+++|++||+++++|+||++|+||||||||||
T Consensus 287 --~~~~~--------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT 356 (997)
T TIGR01106 287 --LGYTW--------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356 (997)
T ss_pred --hcCCH--------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCcee
Confidence 11233 34566788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEEcCeEeecCCC----CCCCC--hHHHHHHHHHHHhccCCccccccCCCC--CCCcccccChhHHHHHHHH
Q psy10301 428 TNRMTAVQAYVCEVQYKNIPK----YEDIP--EDIASKIVEGISVNSGYTSKIMAPENA--NELPKQVGNKTECALLGFV 499 (1119)
Q Consensus 428 ~n~m~v~~~~~~~~~~~~~~~----~~~~~--~~~~~~l~~~i~~~~~~~s~~~~~~~~--~~~~~~~g~~~E~ALl~~~ 499 (1119)
+|+|+|.++++++..|..... ....+ ....+.+...+++|+.... ....+. ....+..|||+|+||+.++
T Consensus 357 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~--~~~~~~~~~~~~~~~gdp~E~ALl~~a 434 (997)
T TIGR01106 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVF--KAGQENVPILKRAVAGDASESALLKCI 434 (997)
T ss_pred cCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCee--ccccCCCcccccccCcChHHHHHHHHH
Confidence 999999999998876643210 00011 1233345555555553221 011000 0123567999999999999
Q ss_pred HHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec----CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHH
Q psy10301 500 VAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQG 575 (1119)
Q Consensus 500 ~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~----~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~ 575 (1119)
...+.+....+..+ +.++.+||||+||+|++++.. ++++++|+|||||.|+++|+++. .+|+..+++++.++
T Consensus 435 ~~~~~~~~~~~~~~---~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~ 510 (997)
T TIGR01106 435 ELCLGSVMEMRERN---PKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKE 510 (997)
T ss_pred HHhCCCHHHHHhhC---ceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHH
Confidence 87665555555443 457789999999999998864 24689999999999999999876 47888889888777
Q ss_pred HHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcC
Q psy10301 576 RLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 655 (1119)
Q Consensus 576 ~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aG 655 (1119)
.+ ++.+++|+++|+|||++|||.++.++..... .+ +.++.+.+|+||+|+|+++++||+||+++++|++|+++|
T Consensus 511 ~~-~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~-~~----~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~G 584 (997)
T TIGR01106 511 AF-QNAYLELGGLGERVLGFCHLYLPDEQFPEGF-QF----DTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAG 584 (997)
T ss_pred HH-HHHHHHHHhcCCEEEEEEEeecCcccccccc-cc----cchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCC
Confidence 65 5678999999999999999998754321100 00 011112348999999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCcCCCCc----------------------eEEEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 656 ITIRMVTGDNINTARSIATKCGIVKPGED----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 656 I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
|+|+|+|||+..||.++|+++||++++.. ..+++|.+++.+ .++++++.+
T Consensus 585 i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l--------~~~el~~~~ 656 (997)
T TIGR01106 585 IKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM--------TSEQLDEIL 656 (997)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC--------CHHHHHHHH
Confidence 99999999999999999999999865431 368899998765 345566666
Q ss_pred Cce--EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhH
Q psy10301 714 PRL--RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 714 ~~~--~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~ 791 (1119)
.+. .||||++|+||.++|+.+ |..|++|+|+|||+||+||||+||||||||++|+|+||++||++|+||||++
T Consensus 657 ~~~~~~VfaR~sPeqK~~IV~~l-----q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 657 KYHTEIVFARTSPQQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HhcCCEEEEECCHHHHHHHHHHH-----HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 654 499999999999999997 5678999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCC
Q psy10301 792 IVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 871 (1119)
Q Consensus 792 i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~ 871 (1119)
|+++++|||++|+|++|+++|+++.|+..+++.++++++..++||+++|+||+|+++|++|+++|++|||++++|+|||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCcccHHHHHHHH-HHHHHHHHHHHHHHHHhhc--------cCCCCCCCC----CCC--C------CC-----Ccc
Q psy10301 872 GR-TKALISKTMMKNII-GQAIYQLVIIFGILFFGDK--------LLDIPTGRG----AEY--G------SL-----PTQ 924 (1119)
Q Consensus 872 ~~-~~~li~~~~~~~i~-~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~----~~~--~------~~-----~~~ 924 (1119)
.+ .++++++.++..++ ..+++++++.|+.+++... .+++..... .+. . .. ...
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 74 78999998887754 4577777666665543221 111100000 000 0 00 014
Q ss_pred hhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhc--cccceecccChhhHHHHHHHH
Q psy10301 925 HFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSLTLEQWGWCLFFG 1002 (1119)
Q Consensus 925 ~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l~~~~w~~~~~~~ 1002 (1119)
++|++|++|+++|+||.+|||+.+ .++|+..++|++++.++++.+++++++++.+ +.+|++.|+++.+|++|++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~~--~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTRR--NSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCc--ccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 689999999999999999999943 4788755899999999999999988877765 799999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q psy10301 1003 VGTLVWQQIVTTVPTK 1018 (1119)
Q Consensus 1003 ~~~l~~~~~vk~i~~~ 1018 (1119)
++.++++++.|++.++
T Consensus 970 ~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-135 Score=1290.29 Aligned_cols=840 Identities=30% Similarity=0.503 Sum_probs=724.1
Q ss_pred CHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHh-hHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 38 GVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEAL-QDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 38 ~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~-~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
+++++++.|+||+.+||++ ++|+++|+++||+|++++++++++|++++++| .++++++|++++++|++++.
T Consensus 8 ~~~~v~~~l~t~~~~GLs~-~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~------- 79 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNS-SQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGN------- 79 (884)
T ss_pred CHHHHHHHhCcCcccCCCc-HHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcc-------
Confidence 7889999999999999984 46899999999999999999999999999999 99999999999999998753
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCC
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGD 196 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd 196 (1119)
|.++++|+++++++++++.+++|++++.+++|+++. +.+++|+|||++++|+++||||||||.|++||
T Consensus 80 ----------~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~--~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 80 ----------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLV--PPECHLIREGKLEHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred ----------hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC--CCeeEEEECCEEEEEEHHHCccCCEEEecCCC
Confidence 889999999999999999999999999999998864 56899999999999999999999999999999
Q ss_pred eecccEEEEeeCceEEecccCCCCCcccccCCCC------------CccccccceeeecceEEEEEEecccchhhHHHHh
Q psy10301 197 LLPADGILIQSNDLKIDESSLTGESDHVKKGELF------------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTL 264 (1119)
Q Consensus 197 ~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~------------~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~l 264 (1119)
.|||||++++|+++.||||+|||||.|+.|.++. +|++|+||.|.+|+++++|++||.+|+.|+|..+
T Consensus 148 ~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~ 227 (884)
T TIGR01522 148 RVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM 227 (884)
T ss_pred EEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH
Confidence 9999999999988999999999999999998642 3699999999999999999999999999999988
Q ss_pred hcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10301 265 LGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCV 344 (1119)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~ 344 (1119)
+..++ ..++|+|+++++++.++..++++++++++++ .++
T Consensus 228 v~~~~-------------------------------------~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~--~~~-- 266 (884)
T TIGR01522 228 MQAIE-------------------------------------KPKTPLQKSMDLLGKQLSLVSFGVIGVICLV--GWF-- 266 (884)
T ss_pred hccCC-------------------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH--
Confidence 86432 4579999999999988766554433222211 111
Q ss_pred hheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCC
Q psy10301 345 KKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 424 (1119)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTG 424 (1119)
.+.+| ...+.+++++++++||||||+++|+++++++++|+|+|++||+++++|+||++|+|||||||
T Consensus 267 -----~~~~~--------~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTG 333 (884)
T TIGR01522 267 -----QGKDW--------LEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTG 333 (884)
T ss_pred -----hcCCH--------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCcc
Confidence 12233 45677889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEEEEEcCeEeecC------CCC----------CCCChHHHHHHHHHHHhccCCccccccCCCCCCCccccc
Q psy10301 425 TLTTNRMTAVQAYVCEVQYKNI------PKY----------EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVG 488 (1119)
Q Consensus 425 TLT~n~m~v~~~~~~~~~~~~~------~~~----------~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g 488 (1119)
|||+|+|+|.+++..+..+... +.. ...++...+.+..+..||++.. ..+ + ....|
T Consensus 334 TLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----~~~--~--~~~~g 405 (884)
T TIGR01522 334 TLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKF----RNE--A--DTLLG 405 (884)
T ss_pred ccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCee----cCC--C--CCcCC
Confidence 9999999999999866432110 000 0011223334433333443321 111 1 13458
Q ss_pred ChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec--CCeeEEEEeCccHHHHhhcccccccCCee
Q psy10301 489 NKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHL 566 (1119)
Q Consensus 489 ~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~--~~~~~l~~KGA~e~il~~c~~~~~~~~~~ 566 (1119)
||+|+|++.++.+.|.+ ..+. .++.++.+||+|.||+|+++++. ++++++|+|||||.|+.+|+.+...+|..
T Consensus 406 ~p~e~All~~~~~~~~~--~~~~---~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~ 480 (884)
T TIGR01522 406 NPTDVALIELLMKFGLD--DLRE---TYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKT 480 (884)
T ss_pred ChHHHHHHHHHHHcCcH--hHHh---hCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCe
Confidence 99999999999877643 2222 23457889999999999999876 67899999999999999999887767888
Q ss_pred ecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHH
Q psy10301 567 EKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPE 646 (1119)
Q Consensus 567 ~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~ 646 (1119)
.+++++.++++ ++.++.|+++|+|++++|||++ +.+|+|+|+++++||+|||+++
T Consensus 481 ~~l~~~~~~~i-~~~~~~~a~~G~rvl~~A~~~~------------------------~~~l~~lGli~l~Dp~r~~~~~ 535 (884)
T TIGR01522 481 LTLTQQQRDVI-QEEAAEMASAGLRVIAFASGPE------------------------KGQLTFLGLVGINDPPRPGVKE 535 (884)
T ss_pred eeCCHHHHHHH-HHHHHHHHhcCCEEEEEEEEcC------------------------CCCeEEEEEEeccCcchhHHHH
Confidence 88888877765 4678899999999999999864 2479999999999999999999
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+|++|+++||+++|+|||+..||.++|+++||...... +++|.+++.+ .++++++++++..||||++|+|
T Consensus 536 ~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~v~g~~l~~~--------~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 536 AVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--SVSGEKLDAM--------DDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc--eeEhHHhHhC--------CHHHHHHHhhcCeEEEECCHHH
Confidence 99999999999999999999999999999999765443 5789988753 4566778888999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHh
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 806 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i 806 (1119)
|..+|+.+ |..|++|+|+|||.||+|||++||||||||.+|+++|+++||++++||||++|++++++||++|+||
T Consensus 606 K~~iv~~l-----q~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni 680 (884)
T TIGR01522 606 KMKIVKAL-----QKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNI 680 (884)
T ss_pred HHHHHHHH-----HHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999997 4568999999999999999999999999997899999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHH
Q psy10301 807 SKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNI 886 (1119)
Q Consensus 807 ~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i 886 (1119)
+|+++|+++.|+..+++.+++.++..++||+++|+||+|+++|.+|+++|++|||++++|+|||+.++++++++.||.++
T Consensus 681 ~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~ 760 (884)
T TIGR01522 681 KNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKI 760 (884)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHH
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHH
Q psy10301 887 IGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYS 965 (1119)
Q Consensus 887 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~ 965 (1119)
+.++++++++.++++++.. .. + .....++|++|++|+++|+||.+|+|+.. .++|+ ++++|+++++
T Consensus 761 ~~~g~~~~~~~~~~~~~~~--~~---~------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~ 827 (884)
T TIGR01522 761 LVSAIIIVVGTLFVFVREM--QD---G------VITARDTTMTFTCFVFFDMFNALACRSQT--KSVFEIGFFSNRMFNY 827 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH--cC---C------cchhhHHHHHHHHHHHHHHHHHHHHccCC--ccccccCcccCHHHHH
Confidence 9999999877766554321 11 1 01235789999999999999999999953 57887 7899999999
Q ss_pred HHHHHHHHHHHHHhh--ccccceecccChhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy10301 966 IWVITMVSQVIIVQY--GGIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPT 1017 (1119)
Q Consensus 966 ~~~~~~~~~~~~v~~--~~~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~ 1017 (1119)
++++++++|++++++ ++.+|++.|+++.+|++|++++++.++++++.|++.+
T Consensus 828 ~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 828 AVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999874 4799999999999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-134 Score=1280.33 Aligned_cols=850 Identities=34% Similarity=0.518 Sum_probs=723.9
Q ss_pred HHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy10301 41 EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDN 120 (1119)
Q Consensus 41 ~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~ 120 (1119)
++...+.+++.+||+ ++|+.+|++.||.|++++.+..++|+.++.+|.+++.++|++++++|++++.+.+..
T Consensus 32 ~~~~~~~~~~~~GLs--~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~------ 103 (917)
T COG0474 32 ELLLELFTSPTTGLS--EEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG------ 103 (917)
T ss_pred hHHHhhcCCcccCCC--HHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC------
Confidence 899999999999999 899999999999999999999999999999999999999999999999987743210
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecc
Q psy10301 121 EETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPA 200 (1119)
Q Consensus 121 ~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPa 200 (1119)
.+...|+..++++.+++.+++|+.++..++|+++. ..+++|+|||++++|+++||||||||.++.||.|||
T Consensus 104 -------~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~--~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPA 174 (917)
T COG0474 104 -------VDAIVILLVVVINALLGFVQEYRAEKALEALKKMS--SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPA 174 (917)
T ss_pred -------cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCceEEEeCCcEEEecHHHCCCCcEEEECCCCcccc
Confidence 45567778888889999999999999999998875 678999999999999999999999999999999999
Q ss_pred cEEEEeeCceEEecccCCCCCcccccCC------------CCCccccccceeeecceEEEEEEecccchhhHHHHhhcCC
Q psy10301 201 DGILIQSNDLKIDESSLTGESDHVKKGE------------LFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGAT 268 (1119)
Q Consensus 201 Dgill~g~~l~VDES~LTGES~pv~K~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~ 268 (1119)
|++|++++++.||||+|||||+|+.|.+ +++|++|+||.|.+|+++++|++||.+|+.|++++++...
T Consensus 175 D~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~ 254 (917)
T COG0474 175 DLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254 (917)
T ss_pred ceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccc
Confidence 9999999999999999999999999973 4579999999999999999999999999999999888643
Q ss_pred chhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhee
Q psy10301 269 DDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFV 348 (1119)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~ 348 (1119)
+...||+|++++++...+..+.++++++++++...
T Consensus 255 -------------------------------------~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-------- 289 (917)
T COG0474 255 -------------------------------------KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-------- 289 (917)
T ss_pred -------------------------------------cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 14689999999999998887777666655544311
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCcccc
Q psy10301 349 IEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTT 428 (1119)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~ 428 (1119)
..+.+| ...|+.++++++.+||+|||+.+|+++++++.+|+|++++||+++++|+||++|+||||||||||+
T Consensus 290 ~~~~~~--------~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTq 361 (917)
T COG0474 290 RGGNGL--------LESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQ 361 (917)
T ss_pred hcCccH--------HHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCcc
Confidence 111123 567888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEEcC-eEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCC--C
Q psy10301 429 NRMTAVQAYVCE-VQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK--N 505 (1119)
Q Consensus 429 n~m~v~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~--~ 505 (1119)
|+|+|+++++++ ..... +.....++... .+...+++|+.... ..+ + +++.|||+|.|++.++.+.|. +
T Consensus 362 N~M~v~~~~~~~~~~~~~-~~~~~~~~~~~-~~l~~~~lc~~~~~----~~~--~-~~~~gdptE~Al~~~a~~~~~~~~ 432 (917)
T COG0474 362 NKMTVKKIYINGGGKDID-DKDLKDSPALL-RFLLAAALCNSVTP----EKN--G-WYQAGDPTEGALVEFAEKLGFSLD 432 (917)
T ss_pred CeEEEEEEEeCCCccccc-ccccccchHHH-HHHHHHHhcCcccc----ccc--C-ceecCCccHHHHHHHHHhcCCcCC
Confidence 999999999985 11111 11111122222 34445555554431 112 2 778999999999999999887 4
Q ss_pred hhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHH
Q psy10301 506 YQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEP 584 (1119)
Q Consensus 506 ~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 584 (1119)
....+..+ .+++.+||||+|||||++++. ++++++|+|||||.|+++|++. ++..+++++.++.+ +...++
T Consensus 433 ~~~~~~~~---~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~-~~~~~~ 504 (917)
T COG0474 433 LSGLEVEY---PILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL-EEAVKE 504 (917)
T ss_pred HHHHhhhc---ceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH-HHHHHH
Confidence 44444333 568999999999999999996 6669999999999999999976 67778888888776 467899
Q ss_pred HhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy10301 585 MACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGD 664 (1119)
Q Consensus 585 ~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD 664 (1119)
|+++|||+|++|||.++..+. .+..+++|+||+|+|++||+||+|+||+++|+.|++|||+|||+|||
T Consensus 505 la~~glRvla~A~k~~~~~~~------------~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 505 LASEGLRVLAVAYKKLDRAEK------------DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHhccCCcccc------------cchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 999999999999997654321 11115789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCC
Q psy10301 665 NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGRE 744 (1119)
Q Consensus 665 ~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~ 744 (1119)
|+.||++||++||+.......++++|.+++.+ .++++.+...+..||||+||+||.++|+.+ |+.|+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l--------~~~el~~~~~~~~VfARvsP~qK~~IV~~l-----q~~g~ 639 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAELDAL--------SDEELAELVEELSVFARVSPEQKARIVEAL-----QKSGH 639 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHhhhc--------CHHHHHHHhhhCcEEEEcCHHHHHHHHHHH-----HhCCC
Confidence 99999999999999755443579999999875 455677777788899999999999999997 56799
Q ss_pred EEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q psy10301 745 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVA 824 (1119)
Q Consensus 745 ~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~ 824 (1119)
+|+|||||+||+||||+||||||||++|+|+||+|||+++.||+|..|+.+++|||++|+|++|+++|.++.|+.++++.
T Consensus 640 vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~ 719 (917)
T COG0474 640 VVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTL 719 (917)
T ss_pred EEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCC-CChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 825 FIGACAVQD-SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 903 (1119)
Q Consensus 825 f~~~~~~~~-spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~ 903 (1119)
+++.++..+ +||+++|+||+|+++|.+|+++|+.++|+.++|++||++++++++++..++.+++...+++.+++++.|.
T Consensus 720 ~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~ 799 (917)
T COG0474 720 LIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFL 799 (917)
T ss_pred HHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888776 9999999999999999999999999999999999999999999999999999888888888777766665
Q ss_pred hhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHHHHHHhhcc
Q psy10301 904 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQYGG 982 (1119)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~~ 982 (1119)
...+........... ......|+.|.+++++|+++.+++|... .++|+ +++.|+.+++++++++++++++++++.
T Consensus 800 ~~~~~~~~~~~~~~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~ 875 (917)
T COG0474 800 LYLLGFIANTLGLDL--FQALLQTTAFTVLVLIQLLLTLAVRSRG--RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPP 875 (917)
T ss_pred HHHHhccccccchhh--HHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhcccccCHHHHHHHHHHHHHHHHHHHhHH
Confidence 443332211111000 1245779999999999999999999864 35665 578999999999999999988887653
Q ss_pred ---ccceecccChhhHHHHHHHHHHHH
Q psy10301 983 ---IAFATHSLTLEQWGWCLFFGVGTL 1006 (1119)
Q Consensus 983 ---~~f~~~~l~~~~w~~~~~~~~~~l 1006 (1119)
..|...+++..+|++++.+....+
T Consensus 876 ~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 876 LNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred hHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 578999999888999888774443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-131 Score=1254.51 Aligned_cols=853 Identities=30% Similarity=0.455 Sum_probs=705.1
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcC
Q psy10301 85 VWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEG 164 (1119)
Q Consensus 85 ~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~ 164 (1119)
+++||++++.++|+++|++|++++++.. +.....+|+++++|+++++++++++.++++++++..++|+++.
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~-------~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~-- 71 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE-------GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYE-- 71 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc-------cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 4789999999999999999999986531 1122356999999999999999999999999999999998763
Q ss_pred CCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCC-----------CCcc
Q psy10301 165 EHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGEL-----------FDPM 233 (1119)
Q Consensus 165 ~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~-----------~~~~ 233 (1119)
+.+++|+|||++++|+++||||||||.|++||.|||||++++|+++.||||+|||||.|+.|.++ .+|+
T Consensus 72 ~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~ 151 (917)
T TIGR01116 72 SEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNM 151 (917)
T ss_pred CCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccce
Confidence 57899999999999999999999999999999999999999998899999999999999999763 2389
Q ss_pred ccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchH
Q psy10301 234 VLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQ 313 (1119)
Q Consensus 234 l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq 313 (1119)
+|+||.|.+|+++++|++||.+|+.|+|..++... +.++||+|
T Consensus 152 l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~-------------------------------------~~~~t~lq 194 (917)
T TIGR01116 152 LFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA-------------------------------------EQEDTPLQ 194 (917)
T ss_pred eeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhcc-------------------------------------CCCCCCHH
Confidence 99999999999999999999999999998877543 25689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy10301 314 AKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV 393 (1119)
Q Consensus 314 ~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~ 393 (1119)
+++++++..+..+.++++++++++.+.++. .. ..+..| .+.+...+..++++++++||||||+++++++++++
T Consensus 195 ~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~--~~-~~~~~~----~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~ 267 (917)
T TIGR01116 195 KKLDEFGELLSKVIGLICILVWVINIGHFN--DP-ALGGGW----IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGT 267 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc-cccchh----HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHH
Confidence 999999998877666555554433222111 00 011223 23445667788999999999999999999999999
Q ss_pred HHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeE------eecC-----CCCC---------CCC
Q psy10301 394 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ------YKNI-----PKYE---------DIP 453 (1119)
Q Consensus 394 ~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~------~~~~-----~~~~---------~~~ 453 (1119)
++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. +... +... ...
T Consensus 268 ~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (917)
T TIGR01116 268 RKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQ 347 (917)
T ss_pred HHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccc
Confidence 9999999999999999999999999999999999999999999986531 1100 0000 001
Q ss_pred hHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhc-------------CCccceee
Q psy10301 454 EDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD-------------LPEEVFTR 520 (1119)
Q Consensus 454 ~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~-------------~~~~~i~~ 520 (1119)
.+..+.+....++|+.... .. ++.++.....|||+|+||+.++.+.|.++...+.. ...++.++
T Consensus 348 ~~~~~~l~~~~~lc~~~~~--~~-~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (917)
T TIGR01116 348 DAGLEELATIAALCNDSSL--DF-NERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLA 424 (917)
T ss_pred hHHHHHHHHHHHhcCCCee--ec-cccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceee
Confidence 1223445555555554321 11 11112223469999999999999888765533211 12245678
Q ss_pred eecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhh-ccCceEEEEEee
Q psy10301 521 VYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC-DGLRTISIAYKD 599 (1119)
Q Consensus 521 ~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~-~GlRtl~lAyr~ 599 (1119)
.+||||+|||||++++.++++++|+|||||.|+++|++++.++|...+++++.++++ ++.++.|++ +|+|||++|||.
T Consensus 425 ~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~~~a~~~GlRvl~~A~k~ 503 (917)
T TIGR01116 425 TLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTI-LSVIKEMGTTKALRCLALAFKD 503 (917)
T ss_pred ecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHH-HHHHHHHHhhcCCeEEEEEEEE
Confidence 999999999999999987889999999999999999998877788889998887776 467899999 999999999999
Q ss_pred cccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 600 FVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 600 l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
++.+.... ...+....+++|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+.
T Consensus 504 ~~~~~~~~------~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~ 577 (917)
T TIGR01116 504 IPDPREED------LLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIF 577 (917)
T ss_pred CCcccccc------ccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCC
Confidence 86532110 001112335689999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCc--eEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHH
Q psy10301 680 KPGED--YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGP 757 (1119)
Q Consensus 680 ~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~ 757 (1119)
.++.+ ...++|+++..+ .++...+...+..||||++|+||.++|+.+ |..|++|+|+|||.||+|
T Consensus 578 ~~~~~v~~~~~~g~~l~~~--------~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l-----q~~g~~va~iGDG~ND~~ 644 (917)
T TIGR01116 578 SPDEDVTFKSFTGREFDEM--------GPAKQRAACRSAVLFSRVEPSHKSELVELL-----QEQGEIVAMTGDGVNDAP 644 (917)
T ss_pred CCCccccceeeeHHHHhhC--------CHHHHHHhhhcCeEEEecCHHHHHHHHHHH-----HhcCCeEEEecCCcchHH
Confidence 76554 246889888654 344566677788999999999999999987 567899999999999999
Q ss_pred hhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChh
Q psy10301 758 ALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLK 837 (1119)
Q Consensus 758 aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~ 837 (1119)
||++|||||||| +|++++|++||+++.||||++|+++++|||++|+|++|+++|++++|+..+++.+++.++..++||+
T Consensus 645 alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~ 723 (917)
T TIGR01116 645 ALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLI 723 (917)
T ss_pred HHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHH
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-----
Q psy10301 838 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPT----- 912 (1119)
Q Consensus 838 ~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~----- 912 (1119)
++|++|+|+++|++|+++|+.++|++++|++||+.+++++++++++.+|+++|++++++.++.+++.....+...
T Consensus 724 ~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (917)
T TIGR01116 724 PVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDS 803 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999876555443221111100
Q ss_pred ----C--CC--CCCCCCCcchhhhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHHHHHHh--hc
Q psy10301 913 ----G--RG--AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQ--YG 981 (1119)
Q Consensus 913 ----~--~~--~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~--~~ 981 (1119)
. .+ ........+++|++|++|+++|+||.+|+|+.+ +++|+ ++|+|+++++++++++++|+++++ +.
T Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~ 881 (917)
T TIGR01116 804 FTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED--QSLLRMPPWVNKWLIGAICLSMALHFLILYVPFL 881 (917)
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc--ccccccCCccCHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 00 000012346789999999999999999999964 57887 789999999999999999999855 45
Q ss_pred cccceecccChhhHHHHHHHHHHHHHHHHHHHHhc
Q psy10301 982 GIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVP 1016 (1119)
Q Consensus 982 ~~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~ 1016 (1119)
+.+|++.|+++.+|++|++++++.++|+++.|++.
T Consensus 882 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 882 SRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999874
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-130 Score=1240.89 Aligned_cols=840 Identities=22% Similarity=0.309 Sum_probs=694.2
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
.+.+++++.|++|. +||| ++|+++|+++||+|++++++++++|++++++|++++.++|++++++|+++++|.+...
T Consensus 30 ~~~~~v~~~l~~~~-~GLs--~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~- 105 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLT--EEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR- 105 (903)
T ss_pred CCHHHHHHHhCCCC-CCCC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC-
Confidence 47899999999995 8999 9999999999999999999999999999999999999999999999999987654211
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeC------CEEEEEEcCCcccCcEE
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQ------NELKQIFVGDIVVGDIC 190 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~------g~~~~I~~~dLvvGDIV 190 (1119)
+...+|.++++|++.++++.+++.+++++++++.++|+++. +.+++|+|| |++++|+++||||||+|
T Consensus 106 -----~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~--~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV 178 (903)
T PRK15122 106 -----GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV--RTTATVLRRGHAGAEPVRREIPMRELVPGDIV 178 (903)
T ss_pred -----CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEECCccCCCCeEEEEEHHHCCCCCEE
Confidence 11235999999999999999999999999999999999875 467999999 48999999999999999
Q ss_pred EEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCC---------------------CCccccccceeeecceEEEE
Q psy10301 191 QIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGEL---------------------FDPMVLSGTHVMEGSGKMVV 249 (1119)
Q Consensus 191 ~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~---------------------~~~~l~sGt~v~~G~~~~~V 249 (1119)
.|++||.|||||++++|+++.||||+|||||.|+.|.+. .+|++|+||.|.+|+++++|
T Consensus 179 ~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V 258 (903)
T PRK15122 179 HLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVV 258 (903)
T ss_pred EECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEE
Confidence 999999999999999999899999999999999999741 24789999999999999999
Q ss_pred EEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHH
Q psy10301 250 TAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGST 329 (1119)
Q Consensus 250 ~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~ 329 (1119)
++||.+|++|+|..++.. ++.++|+|+++++++..+..+...
T Consensus 259 ~atG~~T~~gkI~~~v~~--------------------------------------~~~~t~l~~~l~~i~~~l~~~~~~ 300 (903)
T PRK15122 259 VATGSRTYFGSLAKSIVG--------------------------------------TRAQTAFDRGVNSVSWLLIRFMLV 300 (903)
T ss_pred EEeccccHhhHHHHHhcC--------------------------------------CCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999988753 145789999999998877665544
Q ss_pred HHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhh
Q psy10301 330 IAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDAC 409 (1119)
Q Consensus 330 ~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~ 409 (1119)
++.+++++. +. ...+| ...+..++++++++||||||++++++++.++.+|+|+|++||+++++
T Consensus 301 ~~~~v~~~~---~~------~~~~~--------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~av 363 (903)
T PRK15122 301 MVPVVLLIN---GF------TKGDW--------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAI 363 (903)
T ss_pred HHHHhhhhh---hh------ccCCH--------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchh
Confidence 433222211 11 11233 45667789999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccC
Q psy10301 410 ETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 489 (1119)
Q Consensus 410 E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~ 489 (1119)
|+||++|+||||||||||+|+|+|.+++..+. ..+++ .+ ...++|+.+ ....||
T Consensus 364 E~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~---------~~~~~---~l-~~a~l~s~~-------------~~~~~~ 417 (903)
T PRK15122 364 QNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG---------RKDER---VL-QLAWLNSFH-------------QSGMKN 417 (903)
T ss_pred hhhcCCcEEEecCCcccccCeEEEEEEEcCCC---------CChHH---HH-HHHHHhCCC-------------CCCCCC
Confidence 99999999999999999999999998763221 00112 22 222233211 112589
Q ss_pred hhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeec
Q psy10301 490 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEK 568 (1119)
Q Consensus 490 ~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~ 568 (1119)
|+|.|++.++.+.+.. ..+ ..+...+.+||+|.||+|+++++. +|++++++|||||.++++|+++.. +|...+
T Consensus 418 p~e~All~~a~~~~~~--~~~---~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~ 491 (903)
T PRK15122 418 LMDQAVVAFAEGNPEI--VKP---AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRP 491 (903)
T ss_pred hHHHHHHHHHHHcCch--hhh---hcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc-CCCeec
Confidence 9999999998876532 111 123446789999999999999987 678999999999999999998754 567778
Q ss_pred CCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHH
Q psy10301 569 FTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAI 648 (1119)
Q Consensus 569 ~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI 648 (1119)
++++.++++ ++..+.|+.+|+|++++|||+++.++.. + ...++.|+||+|+|+++++||+|||++++|
T Consensus 492 l~~~~~~~i-~~~~~~~a~~G~rvlavA~k~~~~~~~~----------~-~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI 559 (903)
T PRK15122 492 LDEARRERL-LALAEAYNADGFRVLLVATREIPGGESR----------A-QYSTADERDLVIRGFLTFLDPPKESAAPAI 559 (903)
T ss_pred CCHHHHHHH-HHHHHHHHhCCCEEEEEEEeccCccccc----------c-ccccccccCcEEEEEEeccCccHHHHHHHH
Confidence 888877766 4567899999999999999988653210 0 011234789999999999999999999999
Q ss_pred HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHH
Q psy10301 649 KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 728 (1119)
Q Consensus 649 ~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~ 728 (1119)
++|+++||+|+|+||||+.||.+||+++||.. + -+++|.+++.+ +++++++..++..||||++|+||.
T Consensus 560 ~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~--~vi~G~el~~~--------~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 560 AALRENGVAVKVLTGDNPIVTAKICREVGLEP--G--EPLLGTEIEAM--------DDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--C--CccchHhhhhC--------CHHHHHHHhhhCCEEEEeCHHHHH
Confidence 99999999999999999999999999999942 2 26899998764 566788888889999999999999
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHH
Q psy10301 729 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISK 808 (1119)
Q Consensus 729 ~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k 808 (1119)
++|+.+ |..|++|+|+|||+||+||||+|||||||| +|+|+||++||++|+||||++|++++++||++|+||+|
T Consensus 628 ~iV~~L-----q~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k 701 (903)
T PRK15122 628 RVLKAL-----QANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIK 701 (903)
T ss_pred HHHHHH-----HhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHH
Confidence 999997 567999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHH
Q psy10301 809 FLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIG 888 (1119)
Q Consensus 809 ~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~ 888 (1119)
+++|+++.|+..++..+++.++..+.||+++|+||+||++|+ |+++|++|||++++| |||++++.+++++.++...+.
T Consensus 702 ~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~ 779 (903)
T PRK15122 702 YLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPT 779 (903)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHH
Confidence 999999999999888887777776789999999999999995 999999999999999 999999999999987753332
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHH
Q psy10301 889 QAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWV 968 (1119)
Q Consensus 889 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~ 968 (1119)
.++ ..+..|++.++. +.. +. .. .....+|..|.+++++|+||.+++|+.+. ++|+|++.+..++
T Consensus 780 ~~~-~~~~~~~~~~~~---~~~--~~-~~---~~~~~~t~~f~~l~~~q~~~~~~~R~~~~------~~~~~~~~~~~~~ 843 (903)
T PRK15122 780 SSI-FDITTFALMWFV---FAA--NS-VE---MQALFQSGWFIEGLLSQTLVVHMLRTQKI------PFIQSTAALPVLL 843 (903)
T ss_pred HHH-HHHHHHHHHHHH---hcc--Cc-Hh---hhhhhHHHHHHHHHHHHHHHHHhhCcCCC------CcCcchHHHHHHH
Confidence 222 223333332221 111 10 00 00124578899999999999999998532 3456776666666
Q ss_pred HHHHHHHHHHhhc----cccceecccChhhHHHHHHHHHHHHHHHHHHHHhcCCcCcc
Q psy10301 969 ITMVSQVIIVQYG----GIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPK 1022 (1119)
Q Consensus 969 ~~~~~~~~~v~~~----~~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~~~~~~ 1022 (1119)
+++++|+++++++ +.+|++.|+++.+|++++.+++..+++.++.|.+-.+++++
T Consensus 844 ~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~~~ 901 (903)
T PRK15122 844 TTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRFGQ 901 (903)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 7777777666544 68999999999999999999999999999999665444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-127 Score=1214.45 Aligned_cols=834 Identities=22% Similarity=0.297 Sum_probs=681.3
Q ss_pred cChhhHHHHHh--hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHH
Q psy10301 25 RGREGIAKINE--YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAAL 102 (1119)
Q Consensus 25 ~~~~~~~~~~~--~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaai 102 (1119)
|.+++++.+.. -.+.+++++.|+++. +||+ ++|+++|+++||+|++++++++++|++++++|.+++.++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~GLs--~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ 80 (867)
T TIGR01524 4 HVKKQGNNLLKESQMGKETLLRKLGVHE-TGLT--NVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMG 80 (867)
T ss_pred CCchHHHHHHHHHhCCHHHHHHHhCCCC-CCCC--HHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHH
Confidence 44455555544 247899999999986 7999 999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEe------CCEE
Q psy10301 103 VSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIR------QNEL 176 (1119)
Q Consensus 103 lsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR------~g~~ 176 (1119)
+|++++ .|.++++|+++++++.+++.+++++.+|..++|+++. +.+++|+| ||++
T Consensus 81 ls~~~~-----------------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~--~~~~~V~R~~~~~~dg~~ 141 (867)
T TIGR01524 81 VSYLTD-----------------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV--KNTATVLRVINENGNGSM 141 (867)
T ss_pred HHHHHh-----------------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc--cCeeEEEEecccCCCCeE
Confidence 998764 2899999999999999999999999999999998875 46799999 9999
Q ss_pred EEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCC-----------Cccccccceeeecce
Q psy10301 177 KQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELF-----------DPMVLSGTHVMEGSG 245 (1119)
Q Consensus 177 ~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~-----------~~~l~sGt~v~~G~~ 245 (1119)
++|+++||||||||.|++||.|||||++++|+++.||||+|||||.|+.|.++. +|++|+||.|.+|++
T Consensus 142 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~ 221 (867)
T TIGR01524 142 DEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHA 221 (867)
T ss_pred EEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEE
Confidence 999999999999999999999999999999998999999999999999998642 468999999999999
Q ss_pred EEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHH
Q psy10301 246 KMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGY 325 (1119)
Q Consensus 246 ~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~ 325 (1119)
+++|++||.+|+.|+|..++.. . .+++|+|+++++++.++..
T Consensus 222 ~~~V~~tG~~T~~gki~~~v~~-~-------------------------------------~~~t~lq~~~~~i~~~~~~ 263 (867)
T TIGR01524 222 QAVVLATGSSTWFGSLAIAATE-R-------------------------------------RGQTAFDKGVKSVSKLLIR 263 (867)
T ss_pred EEEEEEEcCccHHHHHHHHhhC-C-------------------------------------CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999988753 1 4578999999999998877
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccc
Q psy10301 326 AGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRH 405 (1119)
Q Consensus 326 ~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~ 405 (1119)
+.++++.+++++.. . .+.+| ...+..++++++++||||||++++++++.++++|+|+|++||+
T Consensus 264 ~~~~~~~i~~~~~~---~------~~~~~--------~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~ 326 (867)
T TIGR01524 264 FMLVMVPVVLMING---L------MKGDW--------LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKE 326 (867)
T ss_pred HHHHHHHHheehHH---H------hcCCH--------HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEcc
Confidence 66655544332211 0 11133 4567788999999999999999999999999999999999999
Q ss_pred hhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcc
Q psy10301 406 LDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPK 485 (1119)
Q Consensus 406 ~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~ 485 (1119)
++++|+||++|+||||||||||+|+|+|.+++.... .+. .+ +....++|+... .
T Consensus 327 l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~----------~~~--~~-~l~~a~l~~~~~-------------~ 380 (867)
T TIGR01524 327 LSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG----------ETS--ER-VLKMAWLNSYFQ-------------T 380 (867)
T ss_pred chhhhhccCccEEEecCCCccccCeEEEEEEecCCC----------CCH--HH-HHHHHHHhCCCC-------------C
Confidence 999999999999999999999999999998752110 011 11 222233333211 1
Q ss_pred cccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCC
Q psy10301 486 QVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNG 564 (1119)
Q Consensus 486 ~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~ 564 (1119)
..+||+|+|++.++.... ....+. .++..+.+||||+||+|+++++. ++.+++|+|||||.++++|+++.. +|
T Consensus 381 ~~~~p~~~Al~~~~~~~~--~~~~~~---~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~ 454 (867)
T TIGR01524 381 GWKNVLDHAVLAKLDESA--ARQTAS---RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GG 454 (867)
T ss_pred CCCChHHHHHHHHHHhhc--hhhHhh---cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc-CC
Confidence 246999999999886532 111122 23446789999999999999987 445889999999999999997754 56
Q ss_pred eeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccH
Q psy10301 565 HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEV 644 (1119)
Q Consensus 565 ~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v 644 (1119)
...+++++.++++ ++.++.|+++|+|++++|||+++.++. +.. ++.|+||+|+|+++++||+|||+
T Consensus 455 ~~~~l~~~~~~~i-~~~~~~~a~~G~rvlavA~~~~~~~~~-----------~~~--~~~e~~l~~lGli~l~Dp~R~~~ 520 (867)
T TIGR01524 455 AVVTLSESEKSEL-QDMTAEMNRQGIRVIAVATKTLKVGEA-----------DFT--KTDEEQLIIEGFLGFLDPPKEST 520 (867)
T ss_pred ceecCCHHHHHHH-HHHHHHHHhcCCEEEEEEEeccCcccc-----------ccc--ccccCCcEEEEEEEeeCCCchhH
Confidence 6778888777765 567899999999999999998865321 011 11267999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecCh
Q psy10301 645 PEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSP 724 (1119)
Q Consensus 645 ~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP 724 (1119)
+++|++|+++||+|+|+||||..||.+||+++||... -+++|.+++.+ +++++.+...+..||||++|
T Consensus 521 ~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~~~--------~~~el~~~~~~~~vfAr~~P 588 (867)
T TIGR01524 521 KEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIEEL--------SDEELARELRKYHIFARLTP 588 (867)
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhhhC--------CHHHHHHHhhhCeEEEECCH
Confidence 9999999999999999999999999999999999532 26789888654 45677788888999999999
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 804 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~ 804 (1119)
+||.++|+.+ |+.|++|+|+|||+||+||||+|||||||| +|+|+||++||++|+||||++|++++++||++|+
T Consensus 589 e~K~~iV~~l-----q~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ 662 (867)
T TIGR01524 589 MQKSRIIGLL-----KKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFG 662 (867)
T ss_pred HHHHHHHHHH-----HhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHH
Confidence 9999999997 567999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHH
Q psy10301 805 SISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMK 884 (1119)
Q Consensus 805 ~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~ 884 (1119)
||+|+++|+++.|+..++..+++.++..++||+++|+||+|+++| +|+++|++|||++++|++||+ ++.+.+. +
T Consensus 663 ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~----~ 736 (867)
T TIGR01524 663 NILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG----R 736 (867)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH----H
Confidence 999999999999999998888877777678999999999999999 799999999999999986555 6664433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHH
Q psy10301 885 NIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFY 964 (1119)
Q Consensus 885 ~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~ 964 (1119)
.++..|++.+++.+..++.....+... +. ......+|..|.+++++|++|.+++|+.+. ++|+|++.+
T Consensus 737 ~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~------~~~~n~~~~ 804 (867)
T TIGR01524 737 FMLCIGPVSSIFDIATFLLMWFVFSAN-TV-----EEQALFQSGWFVVGLLSQTLVVHMIRTEKI------PFIQSRAAA 804 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-ch-----hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC------CcCcchHHH
Confidence 344455544433333222211111100 00 001134688899999999999999998431 456799998
Q ss_pred HHHHHHHHHHHHHHhhc----cccceecccCh--hhHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10301 965 SIWVITMVSQVIIVQYG----GIAFATHSLTL--EQWGWCLFFGVGTLVWQQIVTTVPTKR 1019 (1119)
Q Consensus 965 ~~~~~~~~~~~~~v~~~----~~~f~~~~l~~--~~w~~~~~~~~~~l~~~~~vk~i~~~~ 1019 (1119)
..+++++++++++++.+ +.+|++.|+++ .+|++++.+++. ++.++.|.+-.++
T Consensus 805 ~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~ 863 (867)
T TIGR01524 805 PVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRR 863 (867)
T ss_pred HHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 89999999998887755 57899998854 566666666554 6788888664433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-128 Score=1214.57 Aligned_cols=820 Identities=23% Similarity=0.329 Sum_probs=673.4
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
-+.+++++.|++++ +||| ++|+++|+++||+|+++.++++++|+++|++|.+++.++|++++++|++++
T Consensus 52 ~~~~~v~~~l~~~~-~GLs--~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------- 120 (902)
T PRK10517 52 MPEEELWKTFDTHP-EGLN--EAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------- 120 (902)
T ss_pred CCHHHHHHHhCCCC-CCCC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------
Confidence 47889999999997 6999 999999999999999999999999999999999999999999999998764
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeC------CEEEEEEcCCcccCcEE
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQ------NELKQIFVGDIVVGDIC 190 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~------g~~~~I~~~dLvvGDIV 190 (1119)
+|.++++|++.++++.+++.++++++++..++|+++. +.+++|+|| |++++|+++||||||||
T Consensus 121 ---------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~--~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV 189 (902)
T PRK10517 121 ---------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV--SNTATVLRVINDKGENGWLEIPIDQLVPGDII 189 (902)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEECCccCCCCeEEEEEHHhCCCCCEE
Confidence 2889999999999999999999999999999999875 467999999 78999999999999999
Q ss_pred EEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCC-----------CccccccceeeecceEEEEEEecccchhh
Q psy10301 191 QIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELF-----------DPMVLSGTHVMEGSGKMVVTAVGVNSQAG 259 (1119)
Q Consensus 191 ~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~t~~g 259 (1119)
.|++||.|||||++++|+++.||||+|||||.|+.|.++. +|++|+||.|.+|+++++|++||.+|+.|
T Consensus 190 ~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~G 269 (902)
T PRK10517 190 KLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFG 269 (902)
T ss_pred EECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHH
Confidence 9999999999999999988999999999999999998642 36899999999999999999999999999
Q ss_pred HHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 260 IIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILI 339 (1119)
Q Consensus 260 ~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i 339 (1119)
+|..++..++ .+++|+|.++++++..+..+.++++.+++++.
T Consensus 270 kI~~~v~~~~-------------------------------------~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~- 311 (902)
T PRK10517 270 QLAGRVSEQD-------------------------------------SEPNAFQQGISRVSWLLIRFMLVMAPVVLLIN- 311 (902)
T ss_pred HHHHHhhccC-------------------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHH-
Confidence 9998886432 56899999999999887665555444333221
Q ss_pred HHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEE
Q psy10301 340 SQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 419 (1119)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic 419 (1119)
+. .+.+| ...+.+++++++++||||||+++|++++.++++|+|+|++||+++++|+||++|+||
T Consensus 312 --~~------~~~~~--------~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic 375 (902)
T PRK10517 312 --GY------TKGDW--------WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILC 375 (902)
T ss_pred --HH------hcCCH--------HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEE
Confidence 10 11233 456778899999999999999999999999999999999999999999999999999
Q ss_pred eCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHH
Q psy10301 420 SDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFV 499 (1119)
Q Consensus 420 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~ 499 (1119)
||||||||+|+|+|.+++... ..+. +.+....++|+.+. ...|||+|.|++.++
T Consensus 376 ~DKTGTLT~n~m~V~~~~~~~----------~~~~---~~ll~~a~l~~~~~-------------~~~~~p~d~All~~a 429 (902)
T PRK10517 376 TDKTGTLTQDKIVLENHTDIS----------GKTS---ERVLHSAWLNSHYQ-------------TGLKNLLDTAVLEGV 429 (902)
T ss_pred ecCCCccccceEEEEEEecCC----------CCCH---HHHHHHHHhcCCcC-------------CCCCCHHHHHHHHHH
Confidence 999999999999998764110 0011 12233333343221 125899999999987
Q ss_pred HHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHH
Q psy10301 500 VAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLV 578 (1119)
Q Consensus 500 ~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~ 578 (1119)
...+ ....+.. +...+.+||||.||+|+++++. ++.+++++|||||.|+++|+++.. ++...+++++.++++
T Consensus 430 ~~~~--~~~~~~~---~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i- 502 (902)
T PRK10517 430 DEES--ARSLASR---WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRI- 502 (902)
T ss_pred Hhcc--hhhhhhc---CceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHH-
Confidence 6432 1112222 2345789999999999999986 667889999999999999998754 566778888877665
Q ss_pred HHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEE
Q psy10301 579 RNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITI 658 (1119)
Q Consensus 579 ~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v 658 (1119)
++..+.|+++|+|++++|||+++.++. .. +...|+|++|+|+++|+||+|||++++|++|+++||+|
T Consensus 503 ~~~~~~~a~~G~rvlavA~k~~~~~~~-----------~~--~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v 569 (902)
T PRK10517 503 KRVTDTLNRQGLRVVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTV 569 (902)
T ss_pred HHHHHHHHhcCCEEEEEEEecCCcccc-----------cc--ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEE
Confidence 567889999999999999998865311 01 11126899999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhh
Q psy10301 659 RMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSK 738 (1119)
Q Consensus 659 ~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~ 738 (1119)
+|+||||+.||.+||+++||.. + -+++|.+++.+ +++++++.+++..||||++|+||.++|+.+
T Consensus 570 ~miTGD~~~tA~~IA~~lGI~~--~--~v~~G~el~~l--------~~~el~~~~~~~~VfAr~sPe~K~~IV~~L---- 633 (902)
T PRK10517 570 KILTGDSELVAAKVCHEVGLDA--G--EVLIGSDIETL--------SDDELANLAERTTLFARLTPMHKERIVTLL---- 633 (902)
T ss_pred EEEcCCCHHHHHHHHHHcCCCc--c--CceeHHHHHhC--------CHHHHHHHHhhCcEEEEcCHHHHHHHHHHH----
Confidence 9999999999999999999942 2 37899998764 566788888889999999999999999997
Q ss_pred cCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q psy10301 739 ISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV 818 (1119)
Q Consensus 739 ~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv 818 (1119)
|..|++|+|+|||+||+||||+|||||||| +|+|+||++||++|+||||.+|++++++||++|+||+|+++|+++.|+
T Consensus 634 -q~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~ 711 (902)
T PRK10517 634 -KREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 711 (902)
T ss_pred -HHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 567999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHH
Q psy10301 819 VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIF 898 (1119)
Q Consensus 819 ~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~ 898 (1119)
..++..+++.++..+.||+++|+||+|+++| ++++||++|||++++|++||+ ++...+.+. ++..+++.+++.+
T Consensus 712 ~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~----~~~~g~~~~~~~~ 785 (902)
T PRK10517 712 GNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRF----MVFFGPISSIFDI 785 (902)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHH----HHHHHHHHHHHHH
Confidence 9998888877776668999999999999999 789999999999999999886 233333333 3444444443333
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHH
Q psy10301 899 GILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIV 978 (1119)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v 978 (1119)
..+++....++... + . .....+|..|.+++++|+++.+++|+.+. ++|+|++.+..++.+++++++.+
T Consensus 786 ~~~~~~~~~~~~~~----~-~-~~~~~~~~~F~~~~~~q~~~~~~~R~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 853 (902)
T PRK10517 786 LTFCLMWWVFHANT----P-E-TQTLFQSGWFVVGLLSQTLIVHMIRTRRI------PFIQSRAAWPLMIMTLIVMAVGI 853 (902)
T ss_pred HHHHHHHHHccccc----h-h-hHhHHHHHHHHHHHHHHHHHHHhhccCCC------CcccchHHHHHHHHHHHHHHHHH
Confidence 33322211121100 0 0 00123345699999999999999998431 45688888888888888887776
Q ss_pred hhc----cccceecccC--hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy10301 979 QYG----GIAFATHSLT--LEQWGWCLFFGVGTLVWQQIVTTVP 1016 (1119)
Q Consensus 979 ~~~----~~~f~~~~l~--~~~w~~~~~~~~~~l~~~~~vk~i~ 1016 (1119)
+++ +.+|++.+++ ...|++++.+++. ++.++.|.+-
T Consensus 854 ~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~ 895 (902)
T PRK10517 854 ALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFY 895 (902)
T ss_pred HhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 655 5789999999 5677777666655 6678888653
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-117 Score=1138.48 Aligned_cols=818 Identities=20% Similarity=0.271 Sum_probs=630.6
Q ss_pred CCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhh
Q psy10301 51 NEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEG 130 (1119)
Q Consensus 51 ~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~ 130 (1119)
.+||+ ++|+++|+++||+|+++.++ ++|++++++++.+|+++++++++++++... .|+++
T Consensus 137 ~~GLs--~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~-----------------~~~~~ 196 (1054)
T TIGR01657 137 SNGLT--TGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE-----------------YYYYS 196 (1054)
T ss_pred ccCCC--HHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh-----------------hHHHH
Confidence 47999 99999999999999998864 799999999999999999988876665422 38899
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEc--CCCeecccEEEEeeC
Q psy10301 131 AAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIK--YGDLLPADGILIQSN 208 (1119)
Q Consensus 131 ~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~--~Gd~vPaDgill~g~ 208 (1119)
++|+++++++..++.+++++. .++|+++..+++.++|+|||++++|+++||||||||.|+ +||.|||||+|++|+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~---~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQ---MQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 988888887776666665554 445555544567899999999999999999999999999 999999999999995
Q ss_pred ceEEecccCCCCCcccccCCC----------------CCccccccceeee-------cceEEEEEEecccchhhHHHHhh
Q psy10301 209 DLKIDESSLTGESDHVKKGEL----------------FDPMVLSGTHVME-------GSGKMVVTAVGVNSQAGIIFTLL 265 (1119)
Q Consensus 209 ~l~VDES~LTGES~pv~K~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~t~~g~i~~ll 265 (1119)
+.||||+|||||.|+.|.+. +.+++|+||.|++ |.++++|++||.+|..|++.+.+
T Consensus 274 -~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i 352 (1054)
T TIGR01657 274 -CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI 352 (1054)
T ss_pred -EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHh
Confidence 89999999999999999752 2357999999995 78999999999999999998876
Q ss_pred cCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy10301 266 GATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVK 345 (1119)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~ 345 (1119)
... +...+++++...++...+. +++++.+++.++.+.
T Consensus 353 ~~~-------------------------------------~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~~-- 389 (1054)
T TIGR01657 353 LYP-------------------------------------KPRVFKFYKDSFKFILFLA----VLALIGFIYTIIELI-- 389 (1054)
T ss_pred hCC-------------------------------------CCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHH--
Confidence 432 1345777777666544332 222222222111111
Q ss_pred heeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCc
Q psy10301 346 KFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 425 (1119)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGT 425 (1119)
..+.+| ...++.++++++++|||+||++++++++++++||+|+|++||++.++|++|++|+||||||||
T Consensus 390 ---~~~~~~--------~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGT 458 (1054)
T TIGR01657 390 ---KDGRPL--------GKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGT 458 (1054)
T ss_pred ---HcCCcH--------HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCC
Confidence 112233 456778899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHc-CC
Q psy10301 426 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAI-GK 504 (1119)
Q Consensus 426 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~-g~ 504 (1119)
||+|+|+|.+++..+..........+........+..+++.||+... . ++ ...|||+|.|++.++... ..
T Consensus 459 LTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~--~-----~~--~~~Gdp~E~al~~~~~~~~~~ 529 (1054)
T TIGR01657 459 LTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK--L-----EG--KLVGDPLDKKMFEATGWTLEE 529 (1054)
T ss_pred CccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEE--E-----CC--EEecCHHHHHHHHhCCCEEEC
Confidence 99999999999875432110000000000112234455666665421 1 11 467999999999975321 10
Q ss_pred -Chhhhhh----------cCCccceeeeecCCCCcceEEEEEec--CCeeEEEEeCccHHHHhhcccccccCCeeecCCH
Q psy10301 505 -NYQTVRD----------DLPEEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTK 571 (1119)
Q Consensus 505 -~~~~~~~----------~~~~~~i~~~~~F~s~rk~msvvv~~--~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~ 571 (1119)
+...... ...+.++++.+||+|+||||||+++. ++++++|+|||||.|+++|+.. . ..+
T Consensus 530 ~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----~----~p~ 601 (1054)
T TIGR01657 530 DDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----T----VPS 601 (1054)
T ss_pred CCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc----C----CCh
Confidence 0000000 01345778999999999999999987 3568899999999999999841 0 111
Q ss_pred HHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHH
Q psy10301 572 DMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKC 651 (1119)
Q Consensus 572 ~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l 651 (1119)
-+++.++.|+++|+||||+|||+++....... ...+++++|+||+|+|+++|+||+||+++++|++|
T Consensus 602 -----~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~--------~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l 668 (1054)
T TIGR01657 602 -----DYQEVLKSYTREGYRVLALAYKELPKLTLQKA--------QDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKEL 668 (1054)
T ss_pred -----hHHHHHHHHHhcCCEEEEEEEeecCccchhhh--------hhccHHHHhcCceEEEEEEEecCCCccHHHHHHHH
Confidence 13467889999999999999999874221100 01235678999999999999999999999999999
Q ss_pred HHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCc-----------------------------------------------
Q psy10301 652 QRAGITIRMVTGDNINTARSIATKCGIVKPGED----------------------------------------------- 684 (1119)
Q Consensus 652 ~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~----------------------------------------------- 684 (1119)
++|||+|+|+||||+.||.+||++|||+++++.
T Consensus 669 ~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1054)
T TIGR01657 669 KRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLL 748 (1054)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhc
Confidence 999999999999999999999999999865422
Q ss_pred ----eEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhh
Q psy10301 685 ----YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK 760 (1119)
Q Consensus 685 ----~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk 760 (1119)
.++++|+++..+.. ..++++.+++.+..||||++|+||.++|+.+ |..|++|+|||||+||+||||
T Consensus 749 ~~~~~~~itG~~l~~l~~-----~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~l-----q~~g~~V~m~GDG~ND~~ALK 818 (1054)
T TIGR01657 749 ASRYHLAMSGKAFAVLQA-----HSPELLLRLLSHTTVFARMAPDQKETLVELL-----QKLDYTVGMCGDGANDCGALK 818 (1054)
T ss_pred ccceEEEEEcHHHHHHHH-----hhHHHHHHHHhcCeEEEecCHHHHHHHHHHH-----HhCCCeEEEEeCChHHHHHHH
Confidence 14666666655421 2345678888899999999999999999997 667999999999999999999
Q ss_pred cCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHH
Q psy10301 761 KADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ 840 (1119)
Q Consensus 761 ~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q 840 (1119)
+||||||||. +|+ ..|||+++.+|+|++|+++|+|||+++.++.++++|.+.++++..+..++. +..++||+++|
T Consensus 819 ~AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~l~~~Q 893 (1054)
T TIGR01657 819 QADVGISLSE--AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL--YLIGSNLGDGQ 893 (1054)
T ss_pred hcCcceeecc--ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccCcCccHH
Confidence 9999999983 354 489999999999999999999999999999999999999998775554433 33458999999
Q ss_pred HHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCCCCCCCCCC
Q psy10301 841 MLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK--LLDIPTGRGAEY 918 (1119)
Q Consensus 841 ~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 918 (1119)
+||+|++++++++++|+.++|.+++|+++|. ++++++.++.++++++++++++.++++++... |+......+.+-
T Consensus 894 ~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1054)
T TIGR01657 894 FLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEK 970 (1054)
T ss_pred HHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCccc
Confidence 9999999999999999999999999999994 68999999999999999999888877765432 321111100000
Q ss_pred CCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHH----hhccccceecccChhh
Q psy10301 919 GSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIV----QYGGIAFATHSLTLEQ 994 (1119)
Q Consensus 919 ~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v----~~~~~~f~~~~l~~~~ 994 (1119)
...+....|++| .++.+|.++.+++++.. .++.+++++|++|++.+++.++++++++ +..+.+|++.|++. .
T Consensus 971 ~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g--~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 1046 (1054)
T TIGR01657 971 ENFPNLLNTVLF-FVSSFQYLITAIVNSKG--PPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-E 1046 (1054)
T ss_pred ccCccHHHHHHH-HHHHHHHHHheEEEcCC--cchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-H
Confidence 112344568888 55555666667777642 4666799999999888888777776332 23368899999885 4
Q ss_pred HHHH
Q psy10301 995 WGWC 998 (1119)
Q Consensus 995 w~~~ 998 (1119)
|-+.
T Consensus 1047 ~~~~ 1050 (1054)
T TIGR01657 1047 FRSK 1050 (1054)
T ss_pred HHHH
Confidence 4443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-121 Score=1054.28 Aligned_cols=893 Identities=28% Similarity=0.399 Sum_probs=724.0
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCC
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~ 115 (1119)
--+++|||++++||.++||+ .+++.+++.+-|+|.++|||..+-|..+.+|+.+...++++++|+++++.+.+.+...
T Consensus 41 ~~~~~eL~~r~~t~~~~Glt--~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~ 118 (1019)
T KOG0203|consen 41 KLSVDELCERYGTSVSQGLT--SQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTE 118 (1019)
T ss_pred cCCHHHHHHHhcCChhhccc--HHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccC
Confidence 56899999999999999999 9999999999999999999999999999999999999999999999988766654322
Q ss_pred CCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCC
Q psy10301 116 SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195 (1119)
Q Consensus 116 ~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~G 195 (1119)
+ +.+....+-|+++...+++..+...+++-+..+-.+..+++. ++.++|+|||+...+..+||||||+|.++.|
T Consensus 119 ~----~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~--P~~~~ViRdg~k~~i~~eelVvGD~v~vk~G 192 (1019)
T KOG0203|consen 119 D----DPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV--PQQALVIRDGEKMTINAEELVVGDLVEVKGG 192 (1019)
T ss_pred C----CCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc--hhhheeeecceeEEechhhcccccceeeccC
Confidence 1 111222344544444444444555566666666667777765 6789999999999999999999999999999
Q ss_pred CeecccEEEEeeCceEEecccCCCCCcccccCCC--------CCccccccceeeecceEEEEEEecccchhhHHHHhhcC
Q psy10301 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGEL--------FDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267 (1119)
Q Consensus 196 d~vPaDgill~g~~l~VDES~LTGES~pv~K~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~ 267 (1119)
|+||||.+++++.++++|+|+|||||.|..+.+. ..|+-|.+|++.+|.++++|.+||.+|.+|+|+.+-..
T Consensus 193 drVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 193 DRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred CcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 9999999999999999999999999999988763 46789999999999999999999999999999877643
Q ss_pred CchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe
Q psy10301 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKF 347 (1119)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~ 347 (1119)
. +..++|++..++.+...|....+++++..|++..+.
T Consensus 273 ~-------------------------------------~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~------ 309 (1019)
T KOG0203|consen 273 L-------------------------------------EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL------ 309 (1019)
T ss_pred C-------------------------------------CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh------
Confidence 2 256899999999887777655555554444332211
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccc
Q psy10301 348 VIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 427 (1119)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT 427 (1119)
+.+| ++++...+.++++.+|+|||..+|.++....+||+++|++||++.+.|++|+.++||+|||||||
T Consensus 310 ---gy~~--------l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlT 378 (1019)
T KOG0203|consen 310 ---GYEW--------LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 378 (1019)
T ss_pred ---cchh--------HHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEE
Confidence 2234 44555567888999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEEcCeEeecCCCC------CCCChHHHHHHHHHHHhccCCccccccCCCCC--CCcccccChhHHHHHHHH
Q psy10301 428 TNRMTAVQAYVCEVQYKNIPKY------EDIPEDIASKIVEGISVNSGYTSKIMAPENAN--ELPKQVGNKTECALLGFV 499 (1119)
Q Consensus 428 ~n~m~v~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~--~~~~~~g~~~E~ALl~~~ 499 (1119)
+|+|+|.++|.++......+.. ....+.....+..+..+|+...-+ +.+.+- ......||+.|.||++|+
T Consensus 379 qnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~--~gq~dvPv~kk~v~G~~se~ALlk~~ 456 (1019)
T KOG0203|consen 379 QNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFK--PGQDDVPVLKRDVAGDASEVALLKFI 456 (1019)
T ss_pred ecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceec--ccccCCceeeeeccCCHHHHHHHHHH
Confidence 9999999999988765433211 111122333444555555443311 111111 112457999999999999
Q ss_pred HHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecC----CeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHH
Q psy10301 500 VAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK----NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQG 575 (1119)
Q Consensus 500 ~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~----~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~ 575 (1119)
...-.+...+|+.++. +...||||.+|..-.+.+.+ .++.+.+|||||.++++|+.+.. +|+..|++++.++
T Consensus 457 e~~~~~~~~~R~~~~k---v~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~ 532 (1019)
T KOG0203|consen 457 ELILGSVMELRERNPK---VAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKE 532 (1019)
T ss_pred HHhcchHHHHHHhhHH---hhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHH
Confidence 8765555666666543 46789999999999888763 37889999999999999999876 7888899887776
Q ss_pred HHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcC
Q psy10301 576 RLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 655 (1119)
Q Consensus 576 ~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aG 655 (1119)
.. ++..+++...|-||+++|++.++.+++..... + +.+..+.--.|+.|+|++.+-||+|..+|+|+.+||.||
T Consensus 533 ~f-~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~-f----~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 533 AF-QEAYLELGGLGERVLGFCDLELPDEKFPRGFQ-F----DTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred HH-HHHHHHhhhcchHHHHHHHHhcchhcCCCceE-e----ecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhC
Confidence 65 57889999999999999999998764432211 0 111112224689999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCcCCCCc----------------------eEEEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 656 ITIRMVTGDNINTARSIATKCGIVKPGED----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 656 I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
|+|+|+|||++.||++||++.||+..+.+ ..++.|.|+.. ++++.++++.
T Consensus 607 IkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~--------~~~~qld~il 678 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD--------MSSEQLDELL 678 (1019)
T ss_pred ceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc--------cCHHHHHHHH
Confidence 99999999999999999999998765432 34455555543 4566777765
Q ss_pred Cce--EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhH
Q psy10301 714 PRL--RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 714 ~~~--~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~ 791 (1119)
.+- .||||.||+||..||+.. |+.|.+|+++|||.||+||||+||||||||++|+|++|+|||+||+||||++
T Consensus 679 ~nh~eIVFARTSPqQKLiIVe~c-----Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFAS 753 (1019)
T KOG0203|consen 679 QNHQEIVFARTSPQQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 753 (1019)
T ss_pred HhCCceEEEecCccceEEeEhhh-----hhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchh
Confidence 533 599999999999999996 8899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCC
Q psy10301 792 IVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 871 (1119)
Q Consensus 792 i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~ 871 (1119)
|+..+++||-+|||+||.+.|.|+.|+..+...+++.+++.|.||..+++|.+.|..|..||++||+|+|+.++|+|+|+
T Consensus 754 IVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR 833 (1019)
T KOG0203|consen 754 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPR 833 (1019)
T ss_pred heeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCcccHHHHHHHHHH-HHHHHHHHHHHHHHh---hccC-----------------CCCCCCCCCCCCC-----Ccc
Q psy10301 872 G-RTKALISKTMMKNIIGQ-AIYQLVIIFGILFFG---DKLL-----------------DIPTGRGAEYGSL-----PTQ 924 (1119)
Q Consensus 872 ~-~~~~li~~~~~~~i~~~-~i~~~~~~~~~~~~~---~~~~-----------------~~~~~~~~~~~~~-----~~~ 924 (1119)
. +++.|+|.+++.+-.+| |++|++..|+.+|.. ..++ ++.+.+++.|..+ ..+
T Consensus 834 ~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~t 913 (1019)
T KOG0203|consen 834 NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYT 913 (1019)
T ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHh
Confidence 7 78899998887765554 788988877766632 1121 2334444444322 124
Q ss_pred hhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhcc--ccceecccChhhHHHHHHHH
Q psy10301 925 HFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGG--IAFATHSLTLEQWGWCLFFG 1002 (1119)
Q Consensus 925 ~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~--~~f~~~~l~~~~w~~~~~~~ 1002 (1119)
.+|.+|.++|++|+++.+.|.+.+ .++|+.-++|+.+++.++..+++.+++.+.+| ..+++.|+.+..|+..+.++
T Consensus 914 c~taFfvsIvV~Q~adLii~KTRR--nSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ 991 (1019)
T KOG0203|consen 914 CYTAFFISIVVVQWADLIICKTRR--NSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFG 991 (1019)
T ss_pred hhhheeeeehHHhHhhHHhhhcch--hHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccce
Confidence 678899999999999999998754 47898669999999999888888777777775 78999999999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q psy10301 1003 VGTLVWQQIVTTVPT 1017 (1119)
Q Consensus 1003 ~~~l~~~~~vk~i~~ 1017 (1119)
++.++++++-|++-+
T Consensus 992 ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 992 ILIFVYDEVRKLFIR 1006 (1019)
T ss_pred eeeeeHHHHHhHhhh
Confidence 999999998886543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-114 Score=1082.56 Aligned_cols=749 Identities=23% Similarity=0.373 Sum_probs=608.1
Q ss_pred CCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHH
Q psy10301 53 GLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAA 132 (1119)
Q Consensus 53 GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~ 132 (1119)
||| ++|+++|+++||+|++++++ +++|++++++|.+++.++|+++++++++++. |.++++
T Consensus 1 GLs--~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~-----------------~~~~~~ 60 (755)
T TIGR01647 1 GLT--SAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALEN-----------------WVDFVI 60 (755)
T ss_pred CcC--HHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhcc-----------------hhhhhh
Confidence 899 99999999999999999854 4678999999999999999999999998753 899999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEE
Q psy10301 133 ILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKI 212 (1119)
Q Consensus 133 il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~V 212 (1119)
|++.++++..++.+++++.++..++|+++. +++++|+|||++++|+++||||||||.|++||+|||||++++|+++.|
T Consensus 61 i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~--~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~V 138 (755)
T TIGR01647 61 ILGLLLLNATIGFIEENKAGNAVEALKQSL--APKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQV 138 (755)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEE
Confidence 999999999999999999999999998764 578999999999999999999999999999999999999999988999
Q ss_pred ecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhh
Q psy10301 213 DESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIE 292 (1119)
Q Consensus 213 DES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1119)
|||+|||||.|+.|.+ ++++|+||.|.+|+++++|++||.+|+.|+|.+++..++
T Consensus 139 DeS~LTGES~PV~K~~--~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~----------------------- 193 (755)
T TIGR01647 139 DQAALTGESLPVTKKT--GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTE----------------------- 193 (755)
T ss_pred EcccccCCccceEecc--CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccC-----------------------
Confidence 9999999999999986 578999999999999999999999999999999886442
Q ss_pred hccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHH
Q psy10301 293 AIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTV 372 (1119)
Q Consensus 293 ~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 372 (1119)
.+++|+|+.+++++.++..+.++++++++++. +.. .+.+| ...+..++++
T Consensus 194 --------------~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~---~~~-----~~~~~--------~~~~~~~i~v 243 (755)
T TIGR01647 194 --------------TGSGHLQKILSKIGLFLIVLIGVLVLIELVVL---FFG-----RGESF--------REGLQFALVL 243 (755)
T ss_pred --------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-----cCCCH--------HHHHHHHHHH
Confidence 45789999999999877655544444333221 110 11233 4567788999
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCC
Q psy10301 373 LVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDI 452 (1119)
Q Consensus 373 lv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 452 (1119)
++++|||+||+++++++++++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 244 lv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------~ 314 (755)
T TIGR01647 244 LVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG---------F 314 (755)
T ss_pred HHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC---------C
Confidence 9999999999999999999999999999999999999999999999999999999999999998864321 1
Q ss_pred ChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEE
Q psy10301 453 PEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMS 532 (1119)
Q Consensus 453 ~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~ms 532 (1119)
+++ +.+..+. +++. ...+||+|.|+++++.+.+ ..+. .++..+.+||+|.+|+|+
T Consensus 315 ~~~--~~l~~a~-~~~~---------------~~~~~pi~~Ai~~~~~~~~----~~~~---~~~~~~~~pf~~~~k~~~ 369 (755)
T TIGR01647 315 DKD--DVLLYAA-LASR---------------EEDQDAIDTAVLGSAKDLK----EARD---GYKVLEFVPFDPVDKRTE 369 (755)
T ss_pred CHH--HHHHHHH-HhCC---------------CCCCChHHHHHHHHHHHhH----HHHh---cCceEEEeccCCCCCeEE
Confidence 111 2222222 2221 1236899999999876532 1122 234567899999999999
Q ss_pred EEEec--CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhcc
Q psy10301 533 TVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQV 610 (1119)
Q Consensus 533 vvv~~--~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~ 610 (1119)
++++. +|++++++|||||.++++|+.. ++.+++ +++.+++++++|+|++++|||+-
T Consensus 370 ~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~-~~~~~~~~~~~G~rvl~vA~~~~---------- 427 (755)
T TIGR01647 370 ATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEK-VEEKVDELASRGYRALGVARTDE---------- 427 (755)
T ss_pred EEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHH-HHHHHHHHHhCCCEEEEEEEEcC----------
Confidence 99976 3677889999999999999742 122233 35677899999999999999730
Q ss_pred ccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEec
Q psy10301 611 HIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 690 (1119)
Q Consensus 611 ~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g 690 (1119)
+++|+|+|+++++||+|||++++|++|+++||+|+|+|||++.||++||+++||..+ +++|
T Consensus 428 --------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~-----~~~~ 488 (755)
T TIGR01647 428 --------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN-----IYTA 488 (755)
T ss_pred --------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CcCH
Confidence 357999999999999999999999999999999999999999999999999999532 2344
Q ss_pred HhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc
Q psy10301 691 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI 770 (1119)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~ 770 (1119)
+++... ++...++++++++++.+..+|||++|+||.++|+.+ |..|++|+|+|||+||+|||++||||||||
T Consensus 489 ~~l~~~--~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~~VamvGDGvNDapAL~~AdVGIAm~- 560 (755)
T TIGR01647 489 DVLLKG--DNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEIL-----QKRGHLVGMTGDGVNDAPALKKADVGIAVA- 560 (755)
T ss_pred HHhcCC--cchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHH-----HhcCCEEEEEcCCcccHHHHHhCCeeEEec-
Confidence 444211 111234566788888888999999999999999997 567999999999999999999999999999
Q ss_pred CccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhH
Q psy10301 771 TGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDT 850 (1119)
Q Consensus 771 ~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~ 850 (1119)
+|+|+||++||++|+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++.. .||+|+|+||+|+++|.
T Consensus 561 ~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~ 639 (755)
T TIGR01647 561 GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG 639 (755)
T ss_pred CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH
Confidence 89999999999999999999999999999999999999999999999998877777665433 45999999999999996
Q ss_pred HHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCCCCCCCCCCcchhhhh
Q psy10301 851 LASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK-LLDIPTGRGAEYGSLPTQHFTII 929 (1119)
Q Consensus 851 l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~ 929 (1119)
+++++++|++++. |+|. +..+ ..++..++..|++.++..|.++++... ++..... ....+..+.+|++
T Consensus 640 -~~~~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~ 708 (755)
T TIGR01647 640 -TIMTIAYDNVKPS---KLPQ---RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKF---GLQLLHGNLQSLI 708 (755)
T ss_pred -hHhhccCCCCCCC---CCCC---ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcc---cccccHhhhHHHH
Confidence 6999999998752 3443 3333 367777778888888777766655432 0000000 0011123578999
Q ss_pred HHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHH
Q psy10301 930 FNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVII 977 (1119)
Q Consensus 930 f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~ 977 (1119)
|.++++.|+|+.+++|+.+ ..|+. ..+++++..+++.+++.+++
T Consensus 709 f~~~~~~~~~~~~~~r~~~---~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 709 YLQVSISGQATIFVTRTHG---FFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred HHHHHHHHHHHHheeccCC---CCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854 33433 35666666665555555444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-107 Score=1054.28 Aligned_cols=855 Identities=22% Similarity=0.266 Sum_probs=625.9
Q ss_pred cCCCcCCCCCCccH---HHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHH
Q psy10301 68 FGSNIIPPKPSKTF---LQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVT 144 (1119)
Q Consensus 68 ~G~N~i~~~~~~~f---~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~ 144 (1119)
|.+|.+...|+..+ .+.+|+||+++.+++|+++++++++..+. +. .+ +...+++++.+++..+..
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s-~~--------~~---~t~~~pL~~v~~~~~~~~ 68 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS-PT--------YR---GTSIVPLAFVLIVTAIKE 68 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC-CC--------Cc---cHhHHhHHHHHHHHHHHH
Confidence 67899999888765 58999999999999999999999986542 11 11 122223333444556677
Q ss_pred HHHHHhHHHHHHHHhhhhcCCCeEEEEeC-CEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCc----eEEecccCCC
Q psy10301 145 AFNDYSKEKQFRGLQNQIEGEHKFAVIRQ-NELKQIFVGDIVVGDICQIKYGDLLPADGILIQSND----LKIDESSLTG 219 (1119)
Q Consensus 145 ~~~~~~~~k~~~~L~~~~~~~~~~~ViR~-g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~----l~VDES~LTG 219 (1119)
+++||+++++-++. +.++++|+|+ |++++|+|+||+|||||.|++||.+||||+++++++ +.||||+|||
T Consensus 69 ~~ed~~r~~~d~~~-----n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~G 143 (1057)
T TIGR01652 69 AIEDIRRRRRDKEV-----NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDG 143 (1057)
T ss_pred HHHHHHHHHhHHHH-----hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCC
Confidence 88888877765443 4578999997 899999999999999999999999999999999766 8999999999
Q ss_pred CCcccccCCC----------------------------------------------CCccccccceeee-cceEEEEEEe
Q psy10301 220 ESDHVKKGEL----------------------------------------------FDPMVLSGTHVME-GSGKMVVTAV 252 (1119)
Q Consensus 220 ES~pv~K~~~----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~v 252 (1119)
||+|+.|.+. .+|++++||.+.. |++.++|++|
T Consensus 144 Es~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyT 223 (1057)
T TIGR01652 144 ETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYT 223 (1057)
T ss_pred eecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEE
Confidence 9999988641 1378899999999 9999999999
Q ss_pred cccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHH
Q psy10301 253 GVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAI 332 (1119)
Q Consensus 253 G~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~ 332 (1119)
|.+|..++. ....+.++|++|++++++...+..+.+++++
T Consensus 224 G~~Tk~~~n----------------------------------------~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~ 263 (1057)
T TIGR01652 224 GHDTKLMRN----------------------------------------ATQAPSKRSRLEKELNFLIIILFCLLFVLCL 263 (1057)
T ss_pred chhhhhhhc----------------------------------------CCCCcccccHHHHHHhhHHHHHHHHHHHHHH
Confidence 999987652 1223467899999999998877655555544
Q ss_pred HHHHHHHHHhhhhheeeccchhHH-------HHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH------HHHhhc
Q psy10301 333 LTVVILISQYCVKKFVIEDEEWKA-------IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV------KKMMKD 399 (1119)
Q Consensus 333 l~~ii~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~------~~m~k~ 399 (1119)
+.+++...+. . ......|.. .....++..|..++.+++.++|++||+.++++.+.++ .+|.++
T Consensus 264 i~~i~~~~~~---~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~ 339 (1057)
T TIGR01652 264 ISSVGAGIWN---D-AHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHE 339 (1057)
T ss_pred HHHHHHHhee---c-ccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhcc
Confidence 4333221111 0 000112311 0112234456678889999999999999999999998 788875
Q ss_pred ----cccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCC---------CC-----------C----
Q psy10301 400 ----NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPK---------YE-----------D---- 451 (1119)
Q Consensus 400 ----~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~---------~~-----------~---- 451 (1119)
+++||+++++|+||++++||+|||||||+|+|+++++++++..|..... .. .
T Consensus 340 ~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1057)
T TIGR01652 340 KTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGF 419 (1057)
T ss_pred ccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhccccccccccccccccccc
Confidence 4899999999999999999999999999999999999999888753210 00 0
Q ss_pred ---------------CChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhh-----
Q psy10301 452 ---------------IPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRD----- 511 (1119)
Q Consensus 452 ---------------~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~----- 511 (1119)
...+....+..++++||+..... ..+......++.|||+|.||+.++...|..+.....
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~-~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~ 498 (1057)
T TIGR01652 420 TFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEF-NDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISL 498 (1057)
T ss_pred ccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccc-cCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEE
Confidence 00111234556677777643210 011111234668999999999999998876542211
Q ss_pred ------cCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHH
Q psy10301 512 ------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEP 584 (1119)
Q Consensus 512 ------~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 584 (1119)
...++++++++||+|+|||||++++. ++++.+|+|||||.|+++|+.. +++.++. +++.+++
T Consensus 499 ~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~-~~~~~~~ 567 (1057)
T TIGR01652 499 LIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG----------GNQVNEE-TKEHLEN 567 (1057)
T ss_pred EEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc----------chhHHHH-HHHHHHH
Confidence 12346788999999999999999998 6679999999999999999741 1222333 4577899
Q ss_pred HhhccCceEEEEEeecccchhhhhccccCCC-CCCCc--------ccccccCcEEEEEeeccCCCCccHHHHHHHHHHcC
Q psy10301 585 MACDGLRTISIAYKDFVTDKAEINQVHIEGD-PNWDD--------ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 655 (1119)
Q Consensus 585 ~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~-~~~~~--------~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aG 655 (1119)
|+.+|+||||+|||.+++++++.|...++.. ...++ .+++|+||+|+|++|++||+|+||+++|++|++||
T Consensus 568 ~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AG 647 (1057)
T TIGR01652 568 YASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAG 647 (1057)
T ss_pred HHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCC
Confidence 9999999999999999887665443222110 00111 24689999999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCcCCCCceEE---------------------------------------EecHhHHHH
Q psy10301 656 ITIRMVTGDNINTARSIATKCGIVKPGEDYLI---------------------------------------LEGKEFNRR 696 (1119)
Q Consensus 656 I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~---------------------------------------l~g~~~~~~ 696 (1119)
|+|||+|||+.+||.+||++|||++++...+. ++|+++...
T Consensus 648 Ikv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 727 (1057)
T TIGR01652 648 IKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYA 727 (1057)
T ss_pred CeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHH
Confidence 99999999999999999999999987655444 444444332
Q ss_pred hhcCchhhhHHHHhhhcCce--EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccH
Q psy10301 697 VRDNNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 774 (1119)
Q Consensus 697 ~~~~~~~~~~~~~~~i~~~~--~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~ 774 (1119)
..+. .++.+.++..+. .||||++|+||.++|+.+++ ..|++|+|+|||+||+||||+|||||++ .|++
T Consensus 728 l~~~----~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~----~~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~e 797 (1057)
T TIGR01652 728 LDEE----LEKEFLQLALKCKAVICCRVSPSQKADVVRLVKK----STGKTTLAIGDGANDVSMIQEADVGVGI--SGKE 797 (1057)
T ss_pred HhhH----HHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHh----cCCCeEEEEeCCCccHHHHhhcCeeeEe--cChH
Confidence 2111 122344444433 59999999999999999853 2389999999999999999999999955 5666
Q ss_pred --HHHhccCeeeccCChhHHHHHH-HHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCC---CChhHHHHHHHHHHH
Q psy10301 775 --VAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQD---SPLKAVQMLWVNLIM 848 (1119)
Q Consensus 775 --~ak~aaDiil~d~~f~~i~~~i-~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~---spL~~~q~L~~nli~ 848 (1119)
.|+.+||+++. +|++|.+++ .|||++|+|++++++|++++|++.+++.|++.++... +++.+++++|+|+++
T Consensus 798 g~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~ 875 (1057)
T TIGR01652 798 GMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFF 875 (1057)
T ss_pred HHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 69999999999 699999997 7899999999999999999999999999998886544 568999999999999
Q ss_pred hHHHHhHhcc--CCCCcccccCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCCCCCCCC
Q psy10301 849 DTLASLALAT--EMPTPDLLLRKPY----GRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDI-PTGRGAEYGSL 921 (1119)
Q Consensus 849 d~l~~laL~~--e~p~~~l~~r~P~----~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 921 (1119)
|++|++++|. +++++++|.++|+ ++++++++.+.+..|++.|+||++++|++.++.....+. .+|...+
T Consensus 876 t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~---- 951 (1057)
T TIGR01652 876 TALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDD---- 951 (1057)
T ss_pred HhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccc----
Confidence 9999999974 5778899999996 678899999999999999999999998877654332221 1222111
Q ss_pred CcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhccc------c---ceecccCh
Q psy10301 922 PTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGI------A---FATHSLTL 992 (1119)
Q Consensus 922 ~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~------~---f~~~~l~~ 992 (1119)
.....+++|.++++...+..+. ..+ . .+++.++.+.+++++.+++..+... . +...--++
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~--~~~----~-----wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1057)
T TIGR01652 952 FSSVGVIVFTALVVIVNLKIAL--EIN----R-----WNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTF 1020 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH--HHh----H-----hHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccH
Confidence 1123345555555544333221 111 1 1122122222233222222111111 1 11112357
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCcCcc
Q psy10301 993 EQWGWCLFFGVGTLVWQQIVTTVPTKRLPK 1022 (1119)
Q Consensus 993 ~~w~~~~~~~~~~l~~~~~vk~i~~~~~~~ 1022 (1119)
..|+..++..+..++.+.+++.+.+.+.|.
T Consensus 1021 ~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1021 GFWLVLLVIVLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 789998888888888888998887766653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-100 Score=980.72 Aligned_cols=793 Identities=19% Similarity=0.240 Sum_probs=572.6
Q ss_pred HhcCCCcCCCCCCc--cHH-HHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHH
Q psy10301 66 EVFGSNIIPPKPSK--TFL-QLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVL 142 (1119)
Q Consensus 66 ~~~G~N~i~~~~~~--~f~-~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~ 142 (1119)
..|..|.+...|+. +|+ +.+|+||+...++++++.+++.++..+. +.+ .+...+++++.+++..+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s-~~~-----------~~t~~~PL~~vl~v~~i 152 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-VFG-----------RGASILPLAFVLLVTAV 152 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc-cCC-----------cchHHHHHHHHHHHHHH
Confidence 36899999998875 444 7789999999999999999999876542 111 13334455555555566
Q ss_pred HHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCc----eEEecccCC
Q psy10301 143 VTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSND----LKIDESSLT 218 (1119)
Q Consensus 143 v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~----l~VDES~LT 218 (1119)
..+++||+++|+.+.. |.++++|+|+|++++++|+||+|||||+|++||.+||||+++++++ +.||||+||
T Consensus 153 ke~~Ed~~r~k~d~~~-----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~Ld 227 (1178)
T PLN03190 153 KDAYEDWRRHRSDRIE-----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLD 227 (1178)
T ss_pred HHHHHHHHHHHhHHhh-----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccC
Confidence 6777788777754443 4678999999999999999999999999999999999999998655 899999999
Q ss_pred CCCcccccCCCCCccccccceeeecceEEEEEEecccc----hhhHHHHhhcCCchhhHHHhhhhhhhccccc-----ch
Q psy10301 219 GESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNS----QAGIIFTLLGATDDEEVKQEKKDKKKKKRDE-----ES 289 (1119)
Q Consensus 219 GES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t----~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~-----~~ 289 (1119)
|||+|+.|.+..... + ...-.....+.+.+-.+|. ..|.+. +.........++...+....+++ ..
T Consensus 228 GEt~~k~k~~~~~~~--~-~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~--~~~~~~~l~~~n~llRG~~LrnT~~i~GvV 302 (1178)
T PLN03190 228 GESNLKTRYAKQETL--S-KIPEKEKINGLIKCEKPNRNIYGFQANME--VDGKRLSLGPSNIILRGCELKNTAWAIGVA 302 (1178)
T ss_pred CeeeeeEecccchhh--h-cchhhhhceEEEEEeCCCccceeEEEEEE--ECCCcccCCccceeeccceecCCceEEEEE
Confidence 999999997632111 0 0000011222333333321 122210 00000000111111222222222 24
Q ss_pred hhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHH-------------
Q psy10301 290 AIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA------------- 356 (1119)
Q Consensus 290 ~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~------------- 356 (1119)
+++|.++|.++|+.+++.|+|++++++|++...+..+.+++++++.++...|..........-+|..
T Consensus 303 VYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 382 (1178)
T PLN03190 303 VYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYN 382 (1178)
T ss_pred EEechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 4577788888888888899999999999998877666555555444333222110000000001110
Q ss_pred --HH-HHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcc----------ccccchhhhhhcCCeEEEEeCCC
Q psy10301 357 --IY-FREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN----------NLVRHLDACETMGNATAICSDKT 423 (1119)
Q Consensus 357 --~~-~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~----------ilvr~~~~~E~lG~v~~Ic~DKT 423 (1119)
.+ ...++ .|..++.++...||++|++.++++....+.+|.+|+ ..||+.+.+|+||+|++||+|||
T Consensus 383 ~~~~~~~~~~-~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKT 461 (1178)
T PLN03190 383 YYGWGWEIFF-TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKT 461 (1178)
T ss_pred cchhhHHHHH-HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCC
Confidence 00 11122 234456677799999999999999988788888776 67999999999999999999999
Q ss_pred CccccCCeEEEEEEEcCeEeecCCC--------------CC------C--C------------C---hHHHHHHHHHHHh
Q psy10301 424 GTLTTNRMTAVQAYVCEVQYKNIPK--------------YE------D--I------------P---EDIASKIVEGISV 466 (1119)
Q Consensus 424 GTLT~n~m~v~~~~~~~~~~~~~~~--------------~~------~--~------------~---~~~~~~l~~~i~~ 466 (1119)
||||+|+|++++|++++..|+.... .. . . . ......+..++++
T Consensus 462 GTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lal 541 (1178)
T PLN03190 462 GTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAA 541 (1178)
T ss_pred CccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHh
Confidence 9999999999999999887742100 00 0 0 0 0112346667788
Q ss_pred ccCCccccccCCCCC----CCcccccChhHHHHHHHHHHcCCChhhh---------hhcCCccceeeeecCCCCcceEEE
Q psy10301 467 NSGYTSKIMAPENAN----ELPKQVGNKTECALLGFVVAIGKNYQTV---------RDDLPEEVFTRVYTFNSVRKSMST 533 (1119)
Q Consensus 467 ~~~~~s~~~~~~~~~----~~~~~~g~~~E~ALl~~~~~~g~~~~~~---------~~~~~~~~i~~~~~F~s~rk~msv 533 (1119)
||+...... .+..+ ...++.++|+|+||+.+|...|+.+... .....++++++++||+|+||||||
T Consensus 542 Chtv~~~~~-~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSv 620 (1178)
T PLN03190 542 CNTIVPIVV-DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSV 620 (1178)
T ss_pred cCCceeecc-CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEE
Confidence 876532110 11111 1237778999999999999998633221 122334678899999999999999
Q ss_pred EEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhcccc
Q psy10301 534 VIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHI 612 (1119)
Q Consensus 534 vv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~ 612 (1119)
+++. ++++.+|+|||||.|+++|+.... ++.+++ .++.+++||++||||||+|||++++++++.|...+
T Consensus 621 Iv~~~~~~~~l~~KGA~e~il~~~~~~~~---------~~~~~~-~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~ 690 (1178)
T PLN03190 621 ILGCPDKTVKVFVKGADTSMFSVIDRSLN---------MNVIRA-TEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF 690 (1178)
T ss_pred EEEcCCCcEEEEEecCcHHHHHhhccccc---------chhHHH-HHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHH
Confidence 9997 677999999999999999975421 112222 45678999999999999999999876655443322
Q ss_pred CCCC-C--------CCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC
Q psy10301 613 EGDP-N--------WDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683 (1119)
Q Consensus 613 ~~~~-~--------~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~ 683 (1119)
+... . .+-.+++|+||+++|+++++||+|++++++|++|++|||+|||+|||+.+||.+||++|||++++.
T Consensus 691 ~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~ 770 (1178)
T PLN03190 691 EAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKM 770 (1178)
T ss_pred HHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCC
Confidence 2100 0 011246899999999999999999999999999999999999999999999999999999998765
Q ss_pred ceEEEe-----------------------------------------------cHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 684 DYLILE-----------------------------------------------GKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 684 ~~i~l~-----------------------------------------------g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
..+.++ |.++..+..+ ..++.+.++..++
T Consensus 771 ~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~----~~~~~f~~l~~~~ 846 (1178)
T PLN03190 771 TQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDS----ELEEQLFQLASKC 846 (1178)
T ss_pred eeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhh----HHHHHHHHHHHhC
Confidence 544443 3333222110 0123455555544
Q ss_pred --EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccH--HHHhccCeeeccCChhHH
Q psy10301 717 --RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD--VAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 717 --~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~--~ak~aaDiil~d~~f~~i 792 (1119)
.||||++|+||+++|+.+++ ..+++|+|+|||+||+||||+||||| |++|+| .|+.+||+++. .|+.+
T Consensus 847 ~~VI~cR~sP~QKa~IV~~vk~----~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L 918 (1178)
T PLN03190 847 SVVLCCRVAPLQKAGIVALVKN----RTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFL 918 (1178)
T ss_pred CEEEEecCCHHHHHHHHHHHHh----cCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHH
Confidence 47999999999999999853 23689999999999999999999999 667888 79999999999 89999
Q ss_pred HHHHH-HHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCC---hhHHHHHHHHHHHhHHHHhHhc-c-CCCCcccc
Q psy10301 793 VKAVM-WGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP---LKAVQMLWVNLIMDTLASLALA-T-EMPTPDLL 866 (1119)
Q Consensus 793 ~~~i~-~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~sp---L~~~q~L~~nli~d~l~~laL~-~-e~p~~~l~ 866 (1119)
.+++. |||+.|+|+.+.++|.+++|++.+++.|+++++.++|+ +.++-+.++|++++++|.++++ . .+-+++.+
T Consensus 919 ~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l 998 (1178)
T PLN03190 919 VPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTL 998 (1178)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHH
Confidence 99966 99999999999999999999999999999999887776 5788999999999999999886 2 33445566
Q ss_pred cCCC--C--CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10301 867 LRKP--Y--GRTKALISKTMMKNIIGQAIYQLVIIFGILFFG 904 (1119)
Q Consensus 867 ~r~P--~--~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~ 904 (1119)
.+.| | ++++..++.+.++.|++.|+||++++|++.++.
T Consensus 999 ~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~ 1040 (1178)
T PLN03190 999 LKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFA 1040 (1178)
T ss_pred HhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677 2 567789999999999999999999999876653
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-91 Score=817.11 Aligned_cols=811 Identities=21% Similarity=0.301 Sum_probs=591.0
Q ss_pred CCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhh
Q psy10301 51 NEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEG 130 (1119)
Q Consensus 51 ~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~ 130 (1119)
.+||+ ..++.+||..||+|.|..+. |+.++++.++.-+|+.++..++.++++.-++| |+ +
T Consensus 158 ~~gL~--~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y~----------------~Y-A 217 (1140)
T KOG0208|consen 158 SNGLE--RQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWLADSYY----------------YY-A 217 (1140)
T ss_pred cCCcc--HHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhhcccch----------------hh-h
Confidence 58999 99999999999999998764 58889999888889888877666665554432 44 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcC-CCeecccEEEEeeCc
Q psy10301 131 AAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKY-GDLLPADGILIQSND 209 (1119)
Q Consensus 131 ~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~-Gd~vPaDgill~g~~ 209 (1119)
.+|++.-+..++ +.-|..++|-++++++......|+|+|||.+++|.++|||||||+.+.+ |-+.|||++|++|+
T Consensus 218 ~cI~iisv~Si~---~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~- 293 (1140)
T KOG0208|consen 218 FCIVIISVYSIV---LSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD- 293 (1140)
T ss_pred hHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-
Confidence 444443333333 3445566677788888776779999999999999999999999999998 99999999999986
Q ss_pred eEEecccCCCCCcccccCCC-----------------CCccccccceeee------cceEEEEEEecccchhhHHHHhhc
Q psy10301 210 LKIDESSLTGESDHVKKGEL-----------------FDPMVLSGTHVME------GSGKMVVTAVGVNSQAGIIFTLLG 266 (1119)
Q Consensus 210 l~VDES~LTGES~pv~K~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~t~~g~i~~ll~ 266 (1119)
|.||||+|||||.|+.|.+. ..+.+|+||.+++ |...++|++||.+|..|++.+.+-
T Consensus 294 civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsil 373 (1140)
T KOG0208|consen 294 CIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSIL 373 (1140)
T ss_pred EEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhc
Confidence 79999999999999999873 2468999999986 568899999999999999877653
Q ss_pred CCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy10301 267 ATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKK 346 (1119)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~ 346 (1119)
. ..|...++.+-+..+..+..+++++.++..++.+
T Consensus 374 y-----------------------------------------PkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l---- 408 (1140)
T KOG0208|consen 374 Y-----------------------------------------PKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVL---- 408 (1140)
T ss_pred C-----------------------------------------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhH----
Confidence 2 1223334444443333333333333333222211
Q ss_pred eeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCcc
Q psy10301 347 FVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 426 (1119)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTL 426 (1119)
...+.+ +-..++.++.++.+.+|++||.++++...++.+|+.|+||.|-++..+...|+++++||||||||
T Consensus 409 -~~~g~~--------~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTL 479 (1140)
T KOG0208|consen 409 -NLLGVP--------LKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTL 479 (1140)
T ss_pred -HHcCCC--------HHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcc
Confidence 112222 23567889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEEEEEEEcCeEeecCCCCC-------------CCCh--HHHHHHHHHHHhccCCccccccCCCCCCCcccccChh
Q psy10301 427 TTNRMTAVQAYVCEVQYKNIPKYE-------------DIPE--DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKT 491 (1119)
Q Consensus 427 T~n~m~v~~~~~~~~~~~~~~~~~-------------~~~~--~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~ 491 (1119)
|++.+.+-.+..-.......+... .... .-...+..+++.||+... .. ....|+|.
T Consensus 480 TEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~--v~-------g~l~GDPL 550 (1140)
T KOG0208|consen 480 TEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTL--VD-------GTLVGDPL 550 (1140)
T ss_pred cccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEE--eC-------CeeccCce
Confidence 999999988876332211100000 0000 012345667777775431 10 12244444
Q ss_pred HHHHHHHHHH--------------cC--------CChh--hhhhcCC--ccceeeeecCCCCcceEEEEEec--CCeeEE
Q psy10301 492 ECALLGFVVA--------------IG--------KNYQ--TVRDDLP--EEVFTRVYTFNSVRKSMSTVIPK--KNGYRV 543 (1119)
Q Consensus 492 E~ALl~~~~~--------------~g--------~~~~--~~~~~~~--~~~i~~~~~F~s~rk~msvvv~~--~~~~~l 543 (1119)
|.-+.+.... .+ .+.. +-..+.+ +..+++.+||+|+.+|||||++. ++++.+
T Consensus 551 dlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ 630 (1140)
T KOG0208|consen 551 DLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMV 630 (1140)
T ss_pred eeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEe
Confidence 4433322110 00 0000 0000111 35688999999999999999998 578999
Q ss_pred EEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccc
Q psy10301 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESN 623 (1119)
Q Consensus 544 ~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ 623 (1119)
|+|||||.|.+.|+.- ..+ +-++++++.|+.+|+|+||+|+|.++...... .....++.
T Consensus 631 ftKGaPE~I~~ic~p~----tvP---------~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~--------~~~~~Rd~ 689 (1140)
T KOG0208|consen 631 FTKGAPESIAEICKPE----TVP---------ADYQEVLKEYTHQGFRVIALASKELETSTLQK--------AQKLSRDT 689 (1140)
T ss_pred eccCCHHHHHHhcCcc----cCC---------ccHHHHHHHHHhCCeEEEEEecCccCcchHHH--------HhhccHhh
Confidence 9999999999999742 111 11467889999999999999999997651111 11234678
Q ss_pred cccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEE---------------
Q psy10301 624 IVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL--------------- 688 (1119)
Q Consensus 624 ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l--------------- 688 (1119)
+|+||+|+|++.+|+++|++++.+|++|++|.||++|+||||..||..+|++||++.+...++..
T Consensus 690 vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w 769 (1140)
T KOG0208|consen 690 VESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVW 769 (1140)
T ss_pred hhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEE
Confidence 99999999999999999999999999999999999999999999999999999999876543332
Q ss_pred --------------------------------------ecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHH
Q psy10301 689 --------------------------------------EGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTL 730 (1119)
Q Consensus 689 --------------------------------------~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~i 730 (1119)
+|+.|.... ....+.++++..+..|||||+|+||.++
T Consensus 770 ~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-----~~~~~l~~~Il~~~~VfARMsP~qK~~L 844 (1140)
T KOG0208|consen 770 LCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-----EHFPELVPKILLKGTVFARMSPDQKAEL 844 (1140)
T ss_pred EEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHH-----hhcHHHHHHHHhcCeEEeecCchhHHHH
Confidence 222222221 1245678888889999999999999999
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHH
Q psy10301 731 VKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFL 810 (1119)
Q Consensus 731 V~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i 810 (1119)
|+.+ |+-|..|+|||||+||+.|||+|||||+++. ..|.-||.+.-.-.+.+.+...|++||+....--..+
T Consensus 845 ie~l-----Qkl~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 845 IEAL-----QKLGYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred HHHH-----HhcCcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 9997 6678999999999999999999999999863 3566778888887899999999999999999988888
Q ss_pred HHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHH
Q psy10301 811 QFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQA 890 (1119)
Q Consensus 811 ~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~ 890 (1119)
+|...+.++..+..+ .++...+-+++.|.|+++++..+..+++++..+|...+-..+| +..|++...+...++|.
T Consensus 917 kYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~ 991 (1140)
T KOG0208|consen 917 KYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQI 991 (1140)
T ss_pred HHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHH
Confidence 988777655433322 2344567799999999999999999999999999988877766 45689999888888888
Q ss_pred HHHHHHHHHHHHHhh--ccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHH
Q psy10301 891 IYQLVIIFGILFFGD--KLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWV 968 (1119)
Q Consensus 891 i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~ 968 (1119)
++..++-+...+.+. .|+.-+.... ..+..+...|.+|..--+..+++.+-... ..++.+.+|+|+.|+..+.
T Consensus 992 vli~l~q~i~~l~~~~qpw~~pp~~~~--~~nt~s~~~T~lF~vS~fqYi~~a~v~S~---g~pfr~pl~~n~~f~~~i~ 1066 (1140)
T KOG0208|consen 992 VLICLVQWILTLIVEPQPWYEPPNPQV--DDNTQSSDNTSLFFVSSFQYIFIALVLSK---GSPFRRPLWKNVLFKVFIT 1066 (1140)
T ss_pred HHHHHHHHhhheeeccccceecCCCCc--CcccccceeeEeeehhHHHHHHhheeecc---CCcccCchhcCceeeeehh
Confidence 777777766665542 3432211111 11122334567777777778888776444 2356668899998876555
Q ss_pred HHHHHHHHHHhhc-----cccceecccCh
Q psy10301 969 ITMVSQVIIVQYG-----GIAFATHSLTL 992 (1119)
Q Consensus 969 ~~~~~~~~~v~~~-----~~~f~~~~l~~ 992 (1119)
...+.-+.++... ...++.++.+-
T Consensus 1067 ~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1067 VIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred hHHhhhhhhhhccccchhhhhhceeccCc
Confidence 5444443333221 13455566555
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-88 Score=814.05 Aligned_cols=583 Identities=23% Similarity=0.309 Sum_probs=451.5
Q ss_pred HHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHH----HHhHHHHHHHHhhhh
Q psy10301 87 EALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFN----DYSKEKQFRGLQNQI 162 (1119)
Q Consensus 87 ~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~----~~~~~k~~~~L~~~~ 162 (1119)
.++++|..++|+++++++++++.|.... ++....++++++|++.++++++++.+. +++.+++.+.|+++.
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~------~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~ 101 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLF------HQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQ 101 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhc------ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3577899999999999999998763210 000112467888888888888888887 567777788887764
Q ss_pred cCCCeEE-EEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCC-cccccccee
Q psy10301 163 EGEHKFA-VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFD-PMVLSGTHV 240 (1119)
Q Consensus 163 ~~~~~~~-ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~-~~l~sGt~v 240 (1119)
. +.+++ |.|||++++|++++|+|||+|.|++||.|||||++++|+ ..||||+|||||.|+.|.++.+ +.+|+||.+
T Consensus 102 ~-~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v 179 (673)
T PRK14010 102 T-EMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-ATVDESAITGESAPVIKESGGDFDNVIGGTSV 179 (673)
T ss_pred C-cceEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-eEEecchhcCCCCceeccCCCccCeeecCcee
Confidence 2 23565 789999999999999999999999999999999999997 5999999999999999987521 349999999
Q ss_pred eecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHH
Q psy10301 241 MEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLA 320 (1119)
Q Consensus 241 ~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la 320 (1119)
.+|+++++|+++|.+|++|+|..++..++ .++||+|..+..+.
T Consensus 180 ~~G~~~i~Vta~g~~T~lgki~~lve~a~-------------------------------------~~ktp~e~~l~~l~ 222 (673)
T PRK14010 180 ASDWLEVEITSEPGHSFLDKMIGLVEGAT-------------------------------------RKKTPNEIALFTLL 222 (673)
T ss_pred ecceEEEEEEEecccCHHHHHHHHHhhcc-------------------------------------ccCCHHHHHHHHHH
Confidence 99999999999999999999999987543 46789987766554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcc
Q psy10301 321 IQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN 400 (1119)
Q Consensus 321 ~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ 400 (1119)
..+. +.++++++++ +.+..+. + +...+.+.+++++.+|||+||.+++++++.++++|+|+|
T Consensus 223 ~~l~-----ii~l~~~~~~--~~~~~~~----~--------~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~g 283 (673)
T PRK14010 223 MTLT-----IIFLVVILTM--YPLAKFL----N--------FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFN 283 (673)
T ss_pred HHHh-----HHHHHHHHHH--HHHHhhc----c--------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCC
Confidence 3221 1111111111 1000000 1 122455677888889999999999999999999999999
Q ss_pred ccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCC
Q psy10301 401 NLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENA 480 (1119)
Q Consensus 401 ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~ 480 (1119)
+++|+++++|+||++|+||||||||||+|++.++++...+. .+..+++ .....|+..
T Consensus 284 vLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------~~~~~ll-~~a~~~~~~---------- 340 (673)
T PRK14010 284 ILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------SSFERLV-KAAYESSIA---------- 340 (673)
T ss_pred EEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------ccHHHHH-HHHHHhcCC----------
Confidence 99999999999999999999999999997776666432110 1111222 222222211
Q ss_pred CCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhccccc
Q psy10301 481 NELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIY 560 (1119)
Q Consensus 481 ~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~ 560 (1119)
..+|+++|++.++.+.+.+.... ..+..||++++|+|++.++ ++ .+.|||+|.++++|+.
T Consensus 341 ------s~~P~~~AIv~~a~~~~~~~~~~--------~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 341 ------DDTPEGRSIVKLAYKQHIDLPQE--------VGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred ------CCChHHHHHHHHHHHcCCCchhh--------hcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh--
Confidence 12789999999988765433211 1234799999999998763 33 4569999999999984
Q ss_pred ccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCC
Q psy10301 561 GRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPV 640 (1119)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDpl 640 (1119)
+|...+ .+ +++..+.++++|+|+++++. |++++|+++++||+
T Consensus 401 --~g~~~~--~~-----~~~~~~~~a~~G~~~l~v~~-----------------------------~~~~lG~i~l~Dp~ 442 (673)
T PRK14010 401 --AGGHIP--VD-----LDALVKGVSKKGGTPLVVLE-----------------------------DNEILGVIYLKDVI 442 (673)
T ss_pred --cCCCCc--hH-----HHHHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEeecCC
Confidence 222111 11 23456789999999998752 46899999999999
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEE
Q psy10301 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLA 720 (1119)
Q Consensus 641 r~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~a 720 (1119)
|||++++|++||++||+++|+||||+.||.+||+++||. .++|
T Consensus 443 R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~-------------------------------------~v~A 485 (673)
T PRK14010 443 KDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD-------------------------------------RFVA 485 (673)
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------------------------------eEEc
Confidence 999999999999999999999999999999999999993 4799
Q ss_pred ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHH
Q psy10301 721 RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGR 800 (1119)
Q Consensus 721 r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR 800 (1119)
|++|+||.++|+.+ |.+|++|+|+|||+||+|||++|||||||| +|+|+||++||++++||||+.|++++++||
T Consensus 486 ~~~PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR 559 (673)
T PRK14010 486 ECKPEDKINVIREE-----QAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGK 559 (673)
T ss_pred CCCHHHHHHHHHHH-----HhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHH
Confidence 99999999999997 667999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhchhHHHHHHHHHHhc------------cCCCChhHHH-HHHHH-HHHhHHHHhHhc
Q psy10301 801 NVYDSISKFLQFQLTVNVVAVIVAFIGACA------------VQDSPLKAVQ-MLWVN-LIMDTLASLALA 857 (1119)
Q Consensus 801 ~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~------------~~~spL~~~q-~L~~n-li~d~l~~laL~ 857 (1119)
++|+|+++++.|.++.|+..++..+...+. ...||-+++- -+.+| +|.-.+..|||-
T Consensus 560 ~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
T PRK14010 560 QLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMK 630 (673)
T ss_pred HHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998765544433221 2346666542 23344 445555566663
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-90 Score=851.50 Aligned_cols=900 Identities=19% Similarity=0.228 Sum_probs=637.9
Q ss_pred HHHhcCCCcCCCCCCc--cHH-HHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHH
Q psy10301 64 RREVFGSNIIPPKPSK--TFL-QLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVV 140 (1119)
Q Consensus 64 r~~~~G~N~i~~~~~~--~f~-~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v 140 (1119)
+.+.|-.|.|...|+. +|+ +.+|+||++..++++++.++++++. + .|.+ -|...+++++.+.+.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~-~~~~-----------~~~~~~pl~~vl~~t 94 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-L-SPFN-----------PYTTLVPLLFVLGIT 94 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-c-cccC-----------ccceeeceeeeehHH
Confidence 6669999999998875 555 8899999999999999999999987 3 2322 255666666666677
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCE-EEEEEcCCcccCcEEEEcCCCeecccEEEEeeCc----eEEecc
Q psy10301 141 VLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNE-LKQIFVGDIVVGDICQIKYGDLLPADGILIQSND----LKIDES 215 (1119)
Q Consensus 141 ~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~-~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~----l~VDES 215 (1119)
.+..+++||+++++ ++..|..++.|.|++. +++..|++|+|||+|++..+|.+|||.+|+++++ |+|+++
T Consensus 95 ~iKd~~eD~rR~~~-----D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~ 169 (1151)
T KOG0206|consen 95 AIKDAIEDYRRHKQ-----DKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETA 169 (1151)
T ss_pred HHHHHHhhhhhhhc-----cHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEe
Confidence 77778888887774 3334567899999744 8999999999999999999999999999998876 899999
Q ss_pred cCCCCCcccccCCCCCcccccc--ceeeecceEEEEEEecccchhhHHHHhhcCCch--hhHHHhhhhhhhccccc----
Q psy10301 216 SLTGESDHVKKGELFDPMVLSG--THVMEGSGKMVVTAVGVNSQAGIIFTLLGATDD--EEVKQEKKDKKKKKRDE---- 287 (1119)
Q Consensus 216 ~LTGES~pv~K~~~~~~~l~sG--t~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~--~~~~~~~~~~~~~~~~~---- 287 (1119)
+|+||++++.|++... .+. ..-......+.+.+..+|.........+.-... .....+........+++
T Consensus 170 nLDGEtnLK~k~~l~~---~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~ 246 (1151)
T KOG0206|consen 170 NLDGETNLKVKQALEC---TSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVY 246 (1151)
T ss_pred ecCCccccceeeehhh---hhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEE
Confidence 9999999999986211 111 011112234455555555544333222221100 11111112222222333
Q ss_pred -chhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeec-cchhHHH---HHHHH
Q psy10301 288 -ESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIE-DEEWKAI---YFREF 362 (1119)
Q Consensus 288 -~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~-~~~~~~~---~~~~~ 362 (1119)
..+++|+++|.++|+.+++.+++.++++++.....+..+.++++++..+...++... +... ...|... .....
T Consensus 247 G~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 324 (1151)
T KOG0206|consen 247 GVVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQ--DGRHNGEWWYLSPSEAAYAG 324 (1151)
T ss_pred EEEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeee--cccccCchhhhcCchHHHHH
Confidence 245688999999999999999999999999876555444333333333322222110 0001 1122111 11233
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhh----------ccccccchhhhhhcCCeEEEEeCCCCccccCCeE
Q psy10301 363 VRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMK----------DNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 432 (1119)
Q Consensus 363 ~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k----------~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~ 432 (1119)
...|..++.++...+|.+|...+.+...+.+..+.. ....+|+.+..|+||++++|++|||||||+|.|+
T Consensus 325 ~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~ 404 (1151)
T KOG0206|consen 325 FVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSME 404 (1151)
T ss_pred HHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceee
Confidence 445667788999999999999988887776654433 2467999999999999999999999999999999
Q ss_pred EEEEEEcCeEeecCCCC--------C----------C----------------CChHHHHHHHHHHHhccCCccccccCC
Q psy10301 433 AVQAYVCEVQYKNIPKY--------E----------D----------------IPEDIASKIVEGISVNSGYTSKIMAPE 478 (1119)
Q Consensus 433 v~~~~~~~~~~~~~~~~--------~----------~----------------~~~~~~~~l~~~i~~~~~~~s~~~~~~ 478 (1119)
+.+|.++|..|....+. . . ..++....+..++++||+...... +
T Consensus 405 F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~--~ 482 (1151)
T KOG0206|consen 405 FKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD--E 482 (1151)
T ss_pred eecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC--C
Confidence 99999999988643211 0 0 122334567778888887542210 1
Q ss_pred CCCCCcccccChhHHHHHHHHHHcCCChhhhhh---------cCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCc
Q psy10301 479 NANELPKQVGNKTECALLGFVVAIGKNYQTVRD---------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGA 548 (1119)
Q Consensus 479 ~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~---------~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA 548 (1119)
+.+...++..+|+|.||+..|++.|..+..... ....++++.+.+|+|.||||||||+. +|++++|||||
T Consensus 483 ~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGA 562 (1151)
T KOG0206|consen 483 DSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGA 562 (1151)
T ss_pred CccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCc
Confidence 222567999999999999999999876543221 11256889999999999999999999 77999999999
Q ss_pred cHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCC-CCCCCc-------
Q psy10301 549 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEG-DPNWDD------- 620 (1119)
Q Consensus 549 ~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~-~~~~~~------- 620 (1119)
+.+|.++++.. .+...+...++++.||.+||||||+|||++++++++.|...+.. ....++
T Consensus 563 DsvI~erL~~~-----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e 631 (1151)
T KOG0206|consen 563 DSVIFERLSKN-----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDE 631 (1151)
T ss_pred chhhHhhhhhc-----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHH
Confidence 99999999751 11222234568999999999999999999999999888665522 112222
Q ss_pred -ccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh-------
Q psy10301 621 -ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE------- 692 (1119)
Q Consensus 621 -~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~------- 692 (1119)
.+.+|+||+++|.++|||+++++||++|+.|++||||+||+|||+.+||.+||..|+++.++...+.++-..
T Consensus 632 ~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~ 711 (1151)
T KOG0206|consen 632 VAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSL 711 (1151)
T ss_pred HHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcch
Confidence 256899999999999999999999999999999999999999999999999999999998877666554321
Q ss_pred --------------------------------------HHHHhhcCchhhhHHHHh--hhcCceEEEEecChhhHHHHHH
Q psy10301 693 --------------------------------------FNRRVRDNNGEVQQNLLD--KVWPRLRVLARSSPSDKYTLVK 732 (1119)
Q Consensus 693 --------------------------------------~~~~~~~~~~~~~~~~~~--~i~~~~~v~ar~sP~~K~~iV~ 732 (1119)
+.....+.. ...+- ...++..+|||++|.||+.+|+
T Consensus 712 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~----~~~Fl~la~~C~sViCCR~sPlQKA~Vv~ 787 (1151)
T KOG0206|consen 712 DATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDEL----RKKFLELAKRCKSVICCRVSPLQKALVVK 787 (1151)
T ss_pred hhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchh----hHHHHHHHHhcCEEEEccCCHHHHHHHHH
Confidence 111111000 01111 1234567999999999999999
Q ss_pred HHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH-HHHHHHHHHhHHHHH
Q psy10301 733 GMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQ 811 (1119)
Q Consensus 733 ~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i-~~GR~~~~~i~k~i~ 811 (1119)
.++ ...+.++++||||+||++|++.|||||.+++.+...|..+||+.+. .|+.+.+++ .|||+.|.|+++++.
T Consensus 788 lVk----~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~il 861 (1151)
T KOG0206|consen 788 LVK----KGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMIL 861 (1151)
T ss_pred HHH----hcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHH
Confidence 984 4578999999999999999999999997665556679999999999 899999985 599999999999999
Q ss_pred HHHhchhHHHHHHHHHHhccCCC---ChhHHHHHHHHHHHhHHHHhHhcc--CCCCcccccCCC----CCCCCCcccHHH
Q psy10301 812 FQLTVNVVAVIVAFIGACAVQDS---PLKAVQMLWVNLIMDTLASLALAT--EMPTPDLLLRKP----YGRTKALISKTM 882 (1119)
Q Consensus 812 f~l~~nv~~i~~~f~~~~~~~~s---pL~~~q~L~~nli~d~l~~laL~~--e~p~~~l~~r~P----~~~~~~li~~~~ 882 (1119)
|.+++|+...+..|++.++.++| .+.++++.++|++++++|.++||. .+.+.+.+.+.| ++++..+++++.
T Consensus 862 yfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~ 941 (1151)
T KOG0206|consen 862 YFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKR 941 (1151)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHH
Confidence 99999999999999999887654 478899999999999999999973 456666777777 367778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccch
Q psy10301 883 MKNIIGQAIYQLVIIFGILFFGDKL-LDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNP 961 (1119)
Q Consensus 883 ~~~i~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~ 961 (1119)
++.|++.|+||++++|++.+..... .-..+|...+.... -+.+|...|+. .+.+ +--+.+.| .|-|.
T Consensus 942 f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~----G~~~~T~~Viv-----v~~~-iaL~~~yw--T~i~~ 1009 (1151)
T KOG0206|consen 942 FWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTL----GTTVFTIIVIV-----VNLK-IALETSYW--TWINH 1009 (1151)
T ss_pred HHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhc----cceEEEEEEEE-----EEee-eeeeehhe--eHHHH
Confidence 9999999999999999877654321 11122222221111 11122222221 1111 00001111 11222
Q ss_pred hHHHHHHHHHHHHHHHHhhcc----cc---------ceecccChhhHHHHHHHHHHHHHHHHHHHHhcCCcCcccc
Q psy10301 962 IFYSIWVITMVSQVIIVQYGG----IA---------FATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIF 1024 (1119)
Q Consensus 962 ~~~~~~~~~~~~~~~~v~~~~----~~---------f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~~~~~~~~ 1024 (1119)
+ .+.+++++.+++..+.+ .+ +...--++.+|+.+++..+..|+.+.+.+.+....+|...
T Consensus 1010 i---~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~ 1082 (1151)
T KOG0206|consen 1010 I---VIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDH 1082 (1151)
T ss_pred H---HHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHH
Confidence 2 22233333222222111 11 1111236788999999999999999999999888777643
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-86 Score=801.28 Aligned_cols=588 Identities=24% Similarity=0.313 Sum_probs=459.2
Q ss_pred HHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCC
Q psy10301 87 EALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEH 166 (1119)
Q Consensus 87 ~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~ 166 (1119)
.+|+|++.+++++++++|++++++...+. .+.+...+|+.++.+++.+++..+++++++++.+++++.|++... +.
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~-~~ 104 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQ---SGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK-DT 104 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccc---cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CC
Confidence 57889999999999999999987643211 111223567777777887878788888999999999999988642 34
Q ss_pred eEEEEeCCE-EEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCC-ccccccceeeecc
Q psy10301 167 KFAVIRQNE-LKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFD-PMVLSGTHVMEGS 244 (1119)
Q Consensus 167 ~~~ViR~g~-~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~-~~l~sGt~v~~G~ 244 (1119)
+++|+|||+ +++|++++|++||+|.+++||.|||||++++|. ..||||+|||||.|+.|.++.+ +.+|+||.+.+|+
T Consensus 105 ~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~ 183 (679)
T PRK01122 105 FARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDW 183 (679)
T ss_pred eEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeee
Confidence 799999988 899999999999999999999999999999996 6999999999999999987532 4499999999999
Q ss_pred eEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHH
Q psy10301 245 GKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIG 324 (1119)
Q Consensus 245 ~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~ 324 (1119)
++++|+++|.+|++|+|..+++.++ .++||+|..++.+...+.
T Consensus 184 ~~i~Vta~g~~S~lgki~~lve~a~-------------------------------------~~ktp~e~al~~l~~~l~ 226 (679)
T PRK01122 184 IVIRITANPGESFLDRMIALVEGAK-------------------------------------RQKTPNEIALTILLAGLT 226 (679)
T ss_pred EEEEEEEecccCHHHHHHHHHHhcc-------------------------------------ccCCHHHHHHHHHHHhhh
Confidence 9999999999999999999886542 557999988877654443
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcccccc
Q psy10301 325 YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVR 404 (1119)
Q Consensus 325 ~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr 404 (1119)
.+.+ +.++.+. + +..+ .+.+| .+.+++++++++|||+|+.+++.....++++|+|+|+++|
T Consensus 227 ~i~l----~~~~~~~--~-~~~~--~g~~~----------~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk 287 (679)
T PRK01122 227 IIFL----LVVATLP--P-FAAY--SGGAL----------SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIAT 287 (679)
T ss_pred HHHH----HHHHHHH--H-HHHH--hCchH----------HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeec
Confidence 2111 1111111 0 0001 11112 4667789999999999999999999999999999999999
Q ss_pred chhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCc
Q psy10301 405 HLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484 (1119)
Q Consensus 405 ~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~ 484 (1119)
+++++|+||++|+||||||||||+|+|++++++..+. .++ +.+....+.++...
T Consensus 288 ~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~---~~ll~~a~~~s~~s------------- 341 (679)
T PRK01122 288 SGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG----------VTE---EELADAAQLSSLAD------------- 341 (679)
T ss_pred CchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC----------CCH---HHHHHHHHHhcCCC-------------
Confidence 9999999999999999999999999999998764221 111 22333333333221
Q ss_pred ccccChhHHHHHHHHHH-cCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccC
Q psy10301 485 KQVGNKTECALLGFVVA-IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRN 563 (1119)
Q Consensus 485 ~~~g~~~E~ALl~~~~~-~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~ 563 (1119)
.+|..+|++.++.. .+...... .+...+.+||++.+|+|++.+. | ..|.|||+|.+++.|.. +
T Consensus 342 ---~hP~~~AIv~~a~~~~~~~~~~~-----~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~----~ 405 (679)
T PRK01122 342 ---ETPEGRSIVVLAKQRFNLRERDL-----QSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVES----N 405 (679)
T ss_pred ---CCchHHHHHHHHHhhcCCCchhh-----ccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHh----c
Confidence 13566899998876 23221111 1234567899999988887653 3 57899999999999963 2
Q ss_pred CeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCcc
Q psy10301 564 GHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPE 643 (1119)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~ 643 (1119)
|... .+ + +++.++.++++|+|++++|+ |++++|+++++||+|||
T Consensus 406 g~~~--~~----~-~~~~~~~~a~~G~~~l~va~-----------------------------~~~~lG~i~l~D~~R~~ 449 (679)
T PRK01122 406 GGHF--PA----E-LDAAVDEVARKGGTPLVVAE-----------------------------DNRVLGVIYLKDIVKPG 449 (679)
T ss_pred CCcC--hH----H-HHHHHHHHHhCCCcEEEEEE-----------------------------CCeEEEEEEEeccCchh
Confidence 2211 11 1 34567889999999999984 35799999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecC
Q psy10301 644 VPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 723 (1119)
Q Consensus 644 v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~s 723 (1119)
++++|++||++||+++|+||||+.||.+||+++||. .++||++
T Consensus 450 ~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId-------------------------------------~v~A~~~ 492 (679)
T PRK01122 450 IKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------------------------DFLAEAT 492 (679)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------------------------------EEEccCC
Confidence 999999999999999999999999999999999992 4799999
Q ss_pred hhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHH
Q psy10301 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 803 (1119)
Q Consensus 724 P~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~ 803 (1119)
|+||.++|+.+ |.+|++|+|+|||+||+|||++|||||||| +|+|+||++||++++||||++|++++++||+..
T Consensus 493 PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 493 PEDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred HHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999997 567999999999999999999999999999 999999999999999999999999999999998
Q ss_pred HHhHHHHHHHHhchhH----HHHHHHHHHhc---------cCCCChhHHH-HHHHH-HHHhHHHHhHhc
Q psy10301 804 DSISKFLQFQLTVNVV----AVIVAFIGACA---------VQDSPLKAVQ-MLWVN-LIMDTLASLALA 857 (1119)
Q Consensus 804 ~~i~k~i~f~l~~nv~----~i~~~f~~~~~---------~~~spL~~~q-~L~~n-li~d~l~~laL~ 857 (1119)
-.--....|++. |-+ +++.+++.+.+ ...||-+++- -+.+| +|.-.+..|||-
T Consensus 567 ~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (679)
T PRK01122 567 MTRGALTTFSIA-NDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLALK 634 (679)
T ss_pred hhhHhhhhhhHH-HHHHHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 666666778776 433 55555555443 2345655542 23344 444455556653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=767.80 Aligned_cols=589 Identities=23% Similarity=0.312 Sum_probs=456.3
Q ss_pred HHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhh---HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhc
Q psy10301 87 EALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEG---AAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIE 163 (1119)
Q Consensus 87 ~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~---~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~ 163 (1119)
.||+|+++++|+++|++|++++++.+... .+....+|+++ +++++.+++..+++++++++.++++++|++...
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~----~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~ 103 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFG----MPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKK 103 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccc----cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999987521110 00111247764 445556667777888999999999999988642
Q ss_pred CCCeEEEEe-CCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCC-ccccccceee
Q psy10301 164 GEHKFAVIR-QNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFD-PMVLSGTHVM 241 (1119)
Q Consensus 164 ~~~~~~ViR-~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~-~~l~sGt~v~ 241 (1119)
+..++|+| ||++++|++++|+|||+|.|++||.|||||++++|+ +.||||+|||||.|+.|.++.+ +.+|+||.+.
T Consensus 104 -~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~ 181 (675)
T TIGR01497 104 -TTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRIL 181 (675)
T ss_pred -CceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEE
Confidence 34578886 899999999999999999999999999999999995 7999999999999999987643 2499999999
Q ss_pred ecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHH
Q psy10301 242 EGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAI 321 (1119)
Q Consensus 242 ~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~ 321 (1119)
+|+++++|+++|.+|++|+|..++..++ .++||+|..++.+..
T Consensus 182 ~G~~~i~Vt~~g~~S~lgri~~lve~a~-------------------------------------~~ktplq~~l~~l~~ 224 (675)
T TIGR01497 182 SDWLVVECTANPGETFLDRMIALVEGAQ-------------------------------------RRKTPNEIALTILLI 224 (675)
T ss_pred eeEEEEEEEEecccCHHHHHHHHHHhcc-------------------------------------cCCChHHHHHHHHHH
Confidence 9999999999999999999999887542 457999988887664
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccc
Q psy10301 322 QIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNN 401 (1119)
Q Consensus 322 ~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~i 401 (1119)
.+..+.+ +++ +.++. +..| .+.. ..+.+.+++++++|||+|+...+.....+++||+++|+
T Consensus 225 ~l~~v~l---i~~---~~~~~-~~~~--~~~~----------~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gv 285 (675)
T TIGR01497 225 ALTLVFL---LVT---ATLWP-FAAY--GGNA----------ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNV 285 (675)
T ss_pred HHHHHHH---HHH---HHHHH-HHHh--cChh----------HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCe
Confidence 3321111 111 11111 1111 1111 13556688999999998877777777789999999999
Q ss_pred cccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCC
Q psy10301 402 LVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENAN 481 (1119)
Q Consensus 402 lvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~ 481 (1119)
++|+++++|+||++|+||||||||||+|+|++++++..+. .+. +.+....+.++..
T Consensus 286 LvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~---~~ll~~aa~~~~~----------- 341 (675)
T TIGR01497 286 IATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG----------VDE---KTLADAAQLASLA----------- 341 (675)
T ss_pred EeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC----------CcH---HHHHHHHHHhcCC-----------
Confidence 9999999999999999999999999999999998864211 111 1233333333221
Q ss_pred CCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccc
Q psy10301 482 ELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYG 561 (1119)
Q Consensus 482 ~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~ 561 (1119)
..+|.++|++.++.+.+.++...+ ....+..||++.+|+|++.+. +| +.+.|||+|.+++.|..
T Consensus 342 -----s~hP~a~Aiv~~a~~~~~~~~~~~-----~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~--- 405 (675)
T TIGR01497 342 -----DDTPEGKSIVILAKQLGIREDDVQ-----SLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEA--- 405 (675)
T ss_pred -----CCCcHHHHHHHHHHHcCCCccccc-----cccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHh---
Confidence 135788999999987665433211 123467899999877776543 33 57899999999999863
Q ss_pred cCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCC
Q psy10301 562 RNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVR 641 (1119)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr 641 (1119)
+|... +++ +++.++.++++|+|++++|+ |.+++|+++++||+|
T Consensus 406 -~g~~~--~~~-----~~~~~~~~a~~G~r~l~va~-----------------------------~~~~lG~i~l~D~~R 448 (675)
T TIGR01497 406 -NGGHI--PTD-----LDQAVDQVARQGGTPLVVCE-----------------------------DNRIYGVIYLKDIVK 448 (675)
T ss_pred -cCCCC--cHH-----HHHHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEecccch
Confidence 22211 111 34567889999999999996 247999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEe
Q psy10301 642 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 721 (1119)
Q Consensus 642 ~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar 721 (1119)
||++++|++|+++||+++|+||||..||.++|+++||. .++||
T Consensus 449 p~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~-------------------------------------~v~a~ 491 (675)
T TIGR01497 449 GGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD-------------------------------------DFIAE 491 (675)
T ss_pred hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------------EEEcC
Confidence 99999999999999999999999999999999999993 47899
Q ss_pred cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHH
Q psy10301 722 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRN 801 (1119)
Q Consensus 722 ~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~ 801 (1119)
++|+||..+|+.+ |..|+.|+|+|||+||+|||++|||||||| +|+++|+++||++++||||++|+++++|||+
T Consensus 492 ~~PedK~~~v~~l-----q~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~ 565 (675)
T TIGR01497 492 ATPEDKIALIRQE-----QAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQ 565 (675)
T ss_pred CCHHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHH
Confidence 9999999999997 456889999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhchhH---HHHHHHHHHh---------ccCCCChhHHH-HHHHH-HHHhHHHHhHhc
Q psy10301 802 VYDSISKFLQFQLTVNVV---AVIVAFIGAC---------AVQDSPLKAVQ-MLWVN-LIMDTLASLALA 857 (1119)
Q Consensus 802 ~~~~i~k~i~f~l~~nv~---~i~~~f~~~~---------~~~~spL~~~q-~L~~n-li~d~l~~laL~ 857 (1119)
++-+......|++..++. +++.+.+.+. ....||-+++- -+.+| +|.-.+..|||-
T Consensus 566 ~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (675)
T TIGR01497 566 LLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALK 635 (675)
T ss_pred HHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 999999999999987764 4444443322 22356766642 23344 444555556663
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-81 Score=707.78 Aligned_cols=826 Identities=20% Similarity=0.271 Sum_probs=598.4
Q ss_pred HHHHhcCCCcCCCCCCc--cHH-HHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHH
Q psy10301 63 HRREVFGSNIIPPKPSK--TFL-QLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIV 139 (1119)
Q Consensus 63 ~r~~~~G~N~i~~~~~~--~f~-~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~ 139 (1119)
.++++|-+|.+...|++ +|+ ..+++||+...+.++++.|+..++..+-. +-..+ ++.+++ +.+.+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i---------g~l~t-y~~pl~--fvl~i 141 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI---------GYLST-YWGPLG--FVLTI 141 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee---------cchhh-hhHHHH--HHHHH
Confidence 57788999999988875 444 66789999999999988888777654411 11112 222222 23334
Q ss_pred HHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEE-eCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCc----eEEec
Q psy10301 140 VVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVI-RQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSND----LKIDE 214 (1119)
Q Consensus 140 v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~Vi-R~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~----l~VDE 214 (1119)
..+..++.|+++.+.-+.+ |+++.+++ |+|...+ ++++|.|||+|.++.+++||||.+++++++ +.|-+
T Consensus 142 tl~keavdd~~r~~rd~~~-----Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT 215 (1051)
T KOG0210|consen 142 TLIKEAVDDLKRRRRDREL-----NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT 215 (1051)
T ss_pred HHHHHHHHHHHHHHhhhhh-----hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec
Confidence 4456778888766644433 45566666 5665544 999999999999999999999999998654 78999
Q ss_pred ccCCCCCcccccCC---------------------------------------------CCCccccccceeeecceEEEE
Q psy10301 215 SSLTGESDHVKKGE---------------------------------------------LFDPMVLSGTHVMEGSGKMVV 249 (1119)
Q Consensus 215 S~LTGES~pv~K~~---------------------------------------------~~~~~l~sGt~v~~G~~~~~V 249 (1119)
..|+||+|.+.|-+ .-+|++.++|.|.+|.+.++|
T Consensus 216 DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvV 295 (1051)
T KOG0210|consen 216 DQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVV 295 (1051)
T ss_pred cccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEE
Confidence 99999999877744 124789999999999999999
Q ss_pred EEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHH
Q psy10301 250 TAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGST 329 (1119)
Q Consensus 250 ~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~ 329 (1119)
+.||.+|+. .+|.+.++.|-..++..+|.+.+.+..+.+.
T Consensus 296 vYTG~dtRs----------------------------------------vMNts~pr~KvGllelEiN~ltKiL~~~vlv 335 (1051)
T KOG0210|consen 296 VYTGRDTRS----------------------------------------VMNTSRPRSKVGLLELEINGLTKILFCFVLV 335 (1051)
T ss_pred EEecccHHH----------------------------------------HhccCCcccccceeeeecccHHHHHHHHHHH
Confidence 999987742 3455566677778888888887766544333
Q ss_pred HHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcc----ccccc
Q psy10301 330 IAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN----NLVRH 405 (1119)
Q Consensus 330 ~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~----ilvr~ 405 (1119)
++++.+. ... -+..|+ ..+++.+.++...||.+|-.-+.++...-.+.+..|. ..||+
T Consensus 336 Ls~vmv~-------~~g---~~~~wy--------i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRS 397 (1051)
T KOG0210|consen 336 LSIVMVA-------MKG---FGSDWY--------IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRS 397 (1051)
T ss_pred HHHHHHH-------hhc---CCCchH--------HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeec
Confidence 3322111 111 124563 2345556677778999999999999988888888874 46999
Q ss_pred hhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecC--------------CC-----------CCCCChHHHHHH
Q psy10301 406 LDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI--------------PK-----------YEDIPEDIASKI 460 (1119)
Q Consensus 406 ~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------------~~-----------~~~~~~~~~~~l 460 (1119)
...-|+||+++++.+|||||||+|+|.++++..+...|... +. ..+.+ .....+
T Consensus 398 stIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s-~rv~~~ 476 (1051)
T KOG0210|consen 398 STIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMS-ARVRNA 476 (1051)
T ss_pred CCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCccc-HHHHHH
Confidence 99999999999999999999999999999999988777531 00 01111 233456
Q ss_pred HHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhh-----hhhcC-----CccceeeeecCCCCcce
Q psy10301 461 VEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQT-----VRDDL-----PEEVFTRVYTFNSVRKS 530 (1119)
Q Consensus 461 ~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~-----~~~~~-----~~~~i~~~~~F~s~rk~ 530 (1119)
..++++||+.+.. .++++...+|..+|+|.|++++....|..... +.-.. ..++++.+|||+|+.||
T Consensus 477 V~alalCHNVTPv---~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKR 553 (1051)
T KOG0210|consen 477 VLALALCHNVTPV---FEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKR 553 (1051)
T ss_pred HHHHHHhccCCcc---cCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccce
Confidence 7788999876632 13445788999999999999988776643322 11122 26789999999999999
Q ss_pred EEEEEec--CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhh
Q psy10301 531 MSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 608 (1119)
Q Consensus 531 msvvv~~--~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~ 608 (1119)
|..+|++ .+++..|.|||+-++-+...+ .+++++....||++|||||.+|.|.++.++++.+
T Consensus 554 MGIIVr~e~~~evtfylKGAD~VMs~iVq~----------------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~F 617 (1051)
T KOG0210|consen 554 MGIIVRDETTEEVTFYLKGADVVMSGIVQY----------------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAF 617 (1051)
T ss_pred eeEEEecCCCceEEEEEecchHHHhccccc----------------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHH
Confidence 9999998 589999999999888665442 1235566789999999999999999999888766
Q ss_pred ccccCCC-CCCCcc---------cccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy10301 609 QVHIEGD-PNWDDE---------SNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 678 (1119)
Q Consensus 609 ~~~~~~~-~~~~~~---------~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi 678 (1119)
+..|+.. ....++ .-+|+||.++|++|+||+++++|+.+++.||+|||++||+|||+.+||+.||+..++
T Consensus 618 e~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L 697 (1051)
T KOG0210|consen 618 EEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRL 697 (1051)
T ss_pred HHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccc
Confidence 5554322 112222 257899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCce--------------------------EEEecHhHHHHhhcCchhhhHHHHhhhcC--ceEEEEecChhhHHHH
Q psy10301 679 VKPGEDY--------------------------LILEGKEFNRRVRDNNGEVQQNLLDKVWP--RLRVLARSSPSDKYTL 730 (1119)
Q Consensus 679 ~~~~~~~--------------------------i~l~g~~~~~~~~~~~~~~~~~~~~~i~~--~~~v~ar~sP~~K~~i 730 (1119)
+..++.+ ++++|+.++-.++ ..++++-++.. ...|+|||+|+||+++
T Consensus 698 ~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~-----yye~Ef~el~~~~~aVv~CRctPtQKA~v 772 (1051)
T KOG0210|consen 698 FSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK-----YYEDEFIELVCELPAVVCCRCTPTQKAQV 772 (1051)
T ss_pred eecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH-----HHHHHHHHHHHhcCcEEEEecChhHHHHH
Confidence 8876554 3444444333221 12233333333 3469999999999999
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH-HHHHHHHHhHHH
Q psy10301 731 VKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM-WGRNVYDSISKF 809 (1119)
Q Consensus 731 V~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~-~GR~~~~~i~k~ 809 (1119)
++.+++ ..|..|+++|||-||++|+++||+||.+-......|.-|||+.++ .|+.+.+++. |||+.|+|-.+.
T Consensus 773 ~~llq~----~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~l 846 (1051)
T KOG0210|consen 773 VRLLQK----KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKL 846 (1051)
T ss_pred HHHHHH----hhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHH
Confidence 999875 357899999999999999999999996543445578999999999 8999999977 899999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhccCCCChhH---HHHHHHHHHHhHHHHhHhccCC-CCcccccCCCC----CCCCCcccHH
Q psy10301 810 LQFQLTVNVVAVIVAFIGACAVQDSPLKA---VQMLWVNLIMDTLASLALATEM-PTPDLLLRKPY----GRTKALISKT 881 (1119)
Q Consensus 810 i~f~l~~nv~~i~~~f~~~~~~~~spL~~---~q~L~~nli~d~l~~laL~~e~-p~~~l~~r~P~----~~~~~li~~~ 881 (1119)
-||-+...++...++.++.+.+.+.|..- +-|.-+..+++.+|.++|..+. .++.+..-.|. -.+...++-+
T Consensus 847 aqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYK 926 (1051)
T KOG0210|consen 847 AQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYK 926 (1051)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchh
Confidence 99999999988888888777666666544 4466678889999999998653 34444444552 2355678888
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhh-cccccccccCcccccccccc
Q psy10301 882 MMKNIIGQAIYQLVIIFGIL-FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLF-NEINARKIHGQRNVFEGLFT 959 (1119)
Q Consensus 882 ~~~~i~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~f-n~~~~r~~~~~~~~f~~~~~ 959 (1119)
.|..|+..++||+.++.+.. +....-| ....++.|.++++..+. ..+..++ .
T Consensus 927 tF~iwvLISiYQG~vim~g~~~l~~~ef--------------~~ivaisFtaLi~tELiMVaLtv~t------------w 980 (1051)
T KOG0210|consen 927 TFFIWVLISIYQGSVIMYGALLLFDTEF--------------IHIVAISFTALILTELIMVALTVRT------------W 980 (1051)
T ss_pred hhhhhhhHHHHcccHHHHHHHHHhhhhh--------------eEeeeeeeHHHHHHHHHHHhhhhhh------------h
Confidence 99999999999987765432 2221111 12234555555554322 2333333 2
Q ss_pred chhHHHHHHHHHHHHHHHHhhccccceecccChhhHHH-HHHHHHHHHHHHHHHHHhcCCcCc
Q psy10301 960 NPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWGW-CLFFGVGTLVWQQIVTTVPTKRLP 1021 (1119)
Q Consensus 960 n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~-~~~~~~~~l~~~~~vk~i~~~~~~ 1021 (1119)
+|...++-++++++.++.+.+...+|...-+....++| ..++.+.+.+.-.++|.++++.-|
T Consensus 981 ~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 981 HWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 34445555666666666666667777665544433333 334455566667788888776544
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=706.14 Aligned_cols=635 Identities=25% Similarity=0.412 Sum_probs=489.9
Q ss_pred hhCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCC
Q psy10301 35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGG 114 (1119)
Q Consensus 35 ~~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~ 114 (1119)
+-+..+++-+.|+++.. ||+ ++|+++|+++||.|++.++|...|++++- -+-+|..+....||++..++.--
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt--~~E~~eRlk~fG~NkleEkken~~lKFl~-Fm~~PlswVMEaAAimA~~Lang---- 90 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLT--SDEVEERLKIFGPNKLEEKKESKFLKFLG-FMWNPLSWVMEAAAIMAIGLANG---- 90 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCc--hHHHHHHHHhhCchhhhhhhhhHHHHHHH-HHhchHHHHHHHHHHHHHHHhcC----
Confidence 46889999999998764 999 99999999999999999888766665443 23457778888899888777531
Q ss_pred CCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcC
Q psy10301 115 ESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKY 194 (1119)
Q Consensus 115 ~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~ 194 (1119)
+....+|.+...|...++++..++++++|+.-.....|.+.+ ..|.+|+|||+|.++.+++||||||+.++.
T Consensus 91 ------~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L--A~KakVlRDGkw~E~eAs~lVPGDIlsik~ 162 (942)
T KOG0205|consen 91 ------GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGL--APKAKVLRDGKWSEQEASILVPGDILSIKL 162 (942)
T ss_pred ------CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhcc--CcccEEeecCeeeeeeccccccCceeeecc
Confidence 112236999999999999999999999999988888887766 358899999999999999999999999999
Q ss_pred CCeecccEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHH
Q psy10301 195 GDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVK 274 (1119)
Q Consensus 195 Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~ 274 (1119)
||++||||+|++++-++||+|+|||||.|+.|.+ +.-+||||.|.+|++.++|++||.+|..|+-+.|+..+
T Consensus 163 GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~--gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst------ 234 (942)
T KOG0205|consen 163 GDIIPADARLLEGDPLKIDQSALTGESLPVTKHP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST------ 234 (942)
T ss_pred CCEecCccceecCCccccchhhhcCCccccccCC--CCceecccccccceEEEEEEEeccceeehhhHHhhcCC------
Confidence 9999999999999999999999999999999987 45699999999999999999999999999999988754
Q ss_pred HhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhheeeccch
Q psy10301 275 QEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVV-ILISQYCVKKFVIEDEE 353 (1119)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~i-i~i~~~~~~~~~~~~~~ 353 (1119)
.....+|+-|+.+.... +...++.++ ..++. |..+.+.
T Consensus 235 --------------------------------~~~GHFqkVLt~IGn~c----i~si~~g~lie~~vm-----y~~q~R~ 273 (942)
T KOG0205|consen 235 --------------------------------NQVGHFQKVLTGIGNFC----ICSIALGMLIEITVM-----YPIQHRL 273 (942)
T ss_pred --------------------------------CCcccHHHHHHhhhhHH----HHHHHHHHHHHHHhh-----hhhhhhh
Confidence 33456777777765432 211111111 11111 1122221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeE
Q psy10301 354 WKAIYFREFVRFFMVGVTVLVVA-VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 432 (1119)
Q Consensus 354 ~~~~~~~~~~~~~~~~i~vlv~a-vP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~ 432 (1119)
.+..+..+.++++. ||.|+|..++..++.+..++++++.+++.+.|+|.|+.++++|+|||||||.|+++
T Consensus 274 ---------~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLS 344 (942)
T KOG0205|consen 274 ---------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344 (942)
T ss_pred ---------hhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeeccee
Confidence 12233344455555 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEE----EEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhh
Q psy10301 433 AVQ----AYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQT 508 (1119)
Q Consensus 433 v~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~ 508 (1119)
|-+ .+..+ .+++.. ++.+ +..+ + ...-+..|.|+++...+ .
T Consensus 345 vdknl~ev~v~g-----------v~~D~~--~L~A-~rAs----r-----------~en~DAID~A~v~~L~d----P-- 389 (942)
T KOG0205|consen 345 VDKNLIEVFVKG-----------VDKDDV--LLTA-ARAS----R-----------KENQDAIDAAIVGMLAD----P-- 389 (942)
T ss_pred cCcCcceeeecC-----------CChHHH--HHHH-HHHh----h-----------hcChhhHHHHHHHhhcC----H--
Confidence 876 22211 223222 2211 1111 1 11124567777765322 2
Q ss_pred hhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhh
Q psy10301 509 VRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC 587 (1119)
Q Consensus 509 ~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 587 (1119)
++....++.++..|||+..||....+.+ +|...-.+|||||.|++.|... .+.++ -....+++||+
T Consensus 390 -Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~-----------~~i~~-~vh~~id~~Ae 456 (942)
T KOG0205|consen 390 -KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED-----------HDIPE-RVHSIIDKFAE 456 (942)
T ss_pred -HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhcc-----------CcchH-HHHHHHHHHHH
Confidence 3333445667889999999999888877 7777788999999999999741 11222 24578899999
Q ss_pred ccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy10301 588 DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNIN 667 (1119)
Q Consensus 588 ~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ 667 (1119)
+|||.+++|++..++...+ .-...-.|+|+.-+-||+|.+..++|++....|++|.|+|||...
T Consensus 457 RGlRSLgVArq~v~e~~~~----------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitgdqla 520 (942)
T KOG0205|consen 457 RGLRSLAVARQEVPEKTKE----------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (942)
T ss_pred hcchhhhhhhhcccccccc----------------CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHH
Confidence 9999999999987654211 012234689999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEE
Q psy10301 668 TARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVA 747 (1119)
Q Consensus 668 ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~ 747 (1119)
-++..++++|+-.+-- .+.++--. +.++.+.....++...+..=||.+.|++|+++|+.| |.+++.++
T Consensus 521 I~keTgrrlgmgtnmy-----pss~llG~--~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~L-----q~r~hi~g 588 (942)
T KOG0205|consen 521 IAKETGRRLGMGTNMY-----PSSALLGL--GKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKIL-----QERKHIVG 588 (942)
T ss_pred HHHhhhhhhccccCcC-----CchhhccC--CCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHH-----hhcCceec
Confidence 9999999999832210 11111000 001111111122233344568999999999999997 77899999
Q ss_pred EEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHH
Q psy10301 748 VTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVA 820 (1119)
Q Consensus 748 ~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~ 820 (1119)
|+|||+||+|+||+||+|||+. .++|.|+.+||++++...++.|+.+++.+|.+|+|++.+..|.++..+-.
T Consensus 589 mtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiri 660 (942)
T KOG0205|consen 589 MTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660 (942)
T ss_pred ccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHH
Confidence 9999999999999999999998 89999999999999999999999999999999999999988877665543
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-74 Score=657.22 Aligned_cols=828 Identities=18% Similarity=0.199 Sum_probs=561.8
Q ss_pred CCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhH
Q psy10301 52 EGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGA 131 (1119)
Q Consensus 52 ~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~ 131 (1119)
+|+. +..++..-+++||+|...-+.| +|.+++.|.--.|++.+..++..+++.-. .|+.++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQVFcvgLWCLDe-----------------yWYySl 221 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQVFCVGLWCLDE-----------------YWYYSL 221 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhHHhHHHHHhHH-----------------HHHHHH
Confidence 5776 4677777778899999876644 89999999999998888887777765432 399888
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcC---CCeecccEEEEeeC
Q psy10301 132 AILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKY---GDLLPADGILIQSN 208 (1119)
Q Consensus 132 ~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~---Gd~vPaDgill~g~ 208 (1119)
..+++++.. .+---+++.|....++++-..+..+.|+|+++|+.+..+||+|||+|.|.. ...||||.+|+.|+
T Consensus 222 FtLfMli~f---E~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs 298 (1160)
T KOG0209|consen 222 FTLFMLIAF---EATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS 298 (1160)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc
Confidence 777766554 333345566666777776666789999999999999999999999999977 56899999999998
Q ss_pred ceEEecccCCCCCcccccCC---------------CCCccccccceeee-------------cceEEEEEEecccchhhH
Q psy10301 209 DLKIDESSLTGESDHVKKGE---------------LFDPMVLSGTHVME-------------GSGKMVVTAVGVNSQAGI 260 (1119)
Q Consensus 209 ~l~VDES~LTGES~pv~K~~---------------~~~~~l~sGt~v~~-------------G~~~~~V~~vG~~t~~g~ 260 (1119)
|.||||+|||||.|.-|.+ ++...+|.||++++ |-+.+.|++||.+|..|+
T Consensus 299 -ciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 299 -CIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred -eeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 7899999999999999965 13468999999974 567899999999999998
Q ss_pred HHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 261 IFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILIS 340 (1119)
Q Consensus 261 i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~ 340 (1119)
+.+-+--+. ++-|. .-.+. +.+++.+++|.+...
T Consensus 378 LvRtilf~a-------------------------------------ervTa--Nn~Et-------f~FILFLlVFAiaAa 411 (1160)
T KOG0209|consen 378 LVRTILFSA-------------------------------------ERVTA--NNRET-------FIFILFLLVFAIAAA 411 (1160)
T ss_pred eeeeEEecc-------------------------------------eeeee--ccHHH-------HHHHHHHHHHHHHhh
Confidence 765432211 00010 00111 112233333433333
Q ss_pred Hhhhhheeecc-chhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEE
Q psy10301 341 QYCVKKFVIED-EEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 419 (1119)
Q Consensus 341 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic 419 (1119)
+|. +..+ ..-. +.-.+.|.-++.++...||+.||+-++++..-+...++|.++.|..+-++.-.|++|++|
T Consensus 412 ~Yv----wv~Gskd~~----RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCC 483 (1160)
T KOG0209|consen 412 GYV----WVEGSKDPT----RSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCC 483 (1160)
T ss_pred heE----EEecccCcc----hhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEE
Confidence 322 1121 1111 111244555667788889999999999999999999999999999999999999999999
Q ss_pred eCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHH
Q psy10301 420 SDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFV 499 (1119)
Q Consensus 420 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~ 499 (1119)
||||||||+..|.|.++--.........+.++.+.+..+. ++.||+... + + ...+|+|.|.|.+..+
T Consensus 484 FDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~v----lAscHsLv~--l--e-----~~lVGDPlEKA~l~~v 550 (1160)
T KOG0209|consen 484 FDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLV----LASCHSLVL--L--E-----DKLVGDPLEKATLEAV 550 (1160)
T ss_pred ecCCCccccccEEEEecccccCCcccccchhhCCchHHHH----HHHHHHHHH--h--c-----CcccCChHHHHHHHhc
Confidence 9999999999999987654222111112223333333333 344444321 1 1 1268999999999875
Q ss_pred HH-cCCCh-hh-hhhcCCccceeeeecCCCCcceEEEEEecCC-----eeEEEEeCccHHHHhhcccccccCCeeecCCH
Q psy10301 500 VA-IGKNY-QT-VRDDLPEEVFTRVYTFNSVRKSMSTVIPKKN-----GYRVYTKGASEIILKKCSYIYGRNGHLEKFTK 571 (1119)
Q Consensus 500 ~~-~g~~~-~~-~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~-----~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~ 571 (1119)
.. ..... .. .+.....-++++.|.|+|..||||++....+ ++++.+|||||.|-.+.....
T Consensus 551 ~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP----------- 619 (1160)
T KOG0209|consen 551 GWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP----------- 619 (1160)
T ss_pred CcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc-----------
Confidence 22 11110 00 1111113467899999999999999987632 689999999999988765431
Q ss_pred HHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHH
Q psy10301 572 DMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKC 651 (1119)
Q Consensus 572 ~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l 651 (1119)
.+ ++++..+|+++|.||||++||+++.-... +....+++++|+||+|.|++.|..|+|+|++++|+.+
T Consensus 620 ~d----Y~~iYk~ytR~GsRVLALg~K~l~~~~~~--------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el 687 (1160)
T KOG0209|consen 620 KD----YDEIYKRYTRQGSRVLALGYKPLGDMMVS--------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKEL 687 (1160)
T ss_pred hh----HHHHHHHHhhccceEEEEecccccccchh--------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHH
Confidence 11 34567799999999999999998732111 1112357889999999999999999999999999999
Q ss_pred HHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCce---------------------------------------EEEecHh
Q psy10301 652 QRAGITIRMVTGDNINTARSIATKCGIVKPGEDY---------------------------------------LILEGKE 692 (1119)
Q Consensus 652 ~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~---------------------------------------i~l~g~~ 692 (1119)
++++++++|+||||+.||.++|+++||......+ ++++|..
T Consensus 688 ~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~ 767 (1160)
T KOG0209|consen 688 NNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSA 767 (1160)
T ss_pred hccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhH
Confidence 9999999999999999999999999997542111 2233333
Q ss_pred HHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc
Q psy10301 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG 772 (1119)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g 772 (1119)
++.+. ..+.+..+.+++.||||+.|.||..++..+ +..|+.++|||||+||++|||+||||||+= ++
T Consensus 768 l~~l~-------~~~~l~~l~~hv~VfARvaP~QKE~ii~tl-----K~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~ 834 (1160)
T KOG0209|consen 768 LDHLQ-------ATDQLRRLIPHVWVFARVAPKQKEFIITTL-----KKLGYVTLMCGDGTNDVGALKQAHVGVALL-NN 834 (1160)
T ss_pred HHHHh-------hhHHHHHhhhheeEEEeeChhhHHHHHHHH-----HhcCeEEEEecCCCcchhhhhhcccceehh-cC
Confidence 33321 223566778889999999999999999987 567999999999999999999999999974 22
Q ss_pred cHH-----------------------------------------------------------------------HHhccC
Q psy10301 773 TDV-----------------------------------------------------------------------AKEASD 781 (1119)
Q Consensus 773 ~~~-----------------------------------------------------------------------ak~aaD 781 (1119)
+.. |.-||.
T Consensus 835 ~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAP 914 (1160)
T KOG0209|consen 835 PEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAP 914 (1160)
T ss_pred ChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccc
Confidence 210 111233
Q ss_pred eeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCC
Q psy10301 782 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMP 861 (1119)
Q Consensus 782 iil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p 861 (1119)
+.-.-.+.+++.+.|+.||+..-..-+.+.. |.-|...... -++.++....-+.+.|...-.+++. ..-+.+....|
T Consensus 915 FTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisAY-slSvlyldGVKfgD~QaTisGlLla-~cFlfISrskP 991 (1160)
T KOG0209|consen 915 FTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISAY-SLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKP 991 (1160)
T ss_pred cccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHH-HHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCc
Confidence 3333345778889999999988765443332 2223221111 1122333344466777766555433 33456667788
Q ss_pred CcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhhHHHHHHHhhhcc
Q psy10301 862 TPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNE 941 (1119)
Q Consensus 862 ~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~ 941 (1119)
-+.+-+.+|. ..++|...+..+++|-..+...++++.--....-.-....+..-...|+...|.+|..-...|+...
T Consensus 992 LetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTF 1068 (1160)
T KOG0209|consen 992 LETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTF 1068 (1160)
T ss_pred hhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHh
Confidence 8888887774 4689999988888888888765554432222211111111112224556666777766666676653
Q ss_pred -cccccccCccccccccccchhHHHHHHHHHHHHHHHHh-hc---cccceecccChhhHHH----HHHHHHHHHHHHHHH
Q psy10301 942 -INARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQ-YG---GIAFATHSLTLEQWGW----CLFFGVGTLVWQQIV 1012 (1119)
Q Consensus 942 -~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~-~~---~~~f~~~~l~~~~w~~----~~~~~~~~l~~~~~v 1012 (1119)
+|.+ .+++.+++..|+.++..+++...+-+.++. +. ...|...+++-.+-.. .++=-++.++|+.+.
T Consensus 1069 AVNY~----G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~ 1144 (1160)
T KOG0209|consen 1069 AVNYQ----GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVL 1144 (1160)
T ss_pred hhhcc----CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 357778999999877766665544333332 11 3567777776332211 222223445556555
Q ss_pred HHh
Q psy10301 1013 TTV 1015 (1119)
Q Consensus 1013 k~i 1015 (1119)
++.
T Consensus 1145 ~f~ 1147 (1160)
T KOG0209|consen 1145 KFF 1147 (1160)
T ss_pred HHH
Confidence 543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-73 Score=688.51 Aligned_cols=493 Identities=38% Similarity=0.556 Sum_probs=419.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecc
Q psy10301 136 SVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDES 215 (1119)
Q Consensus 136 ~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES 215 (1119)
++++..++..+.+++.++..+.|.++..++++++|+|+| +++|++++|+|||+|.+++||.+||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 345566778888899999999998865568899999999 999999999999999999999999999999995 799999
Q ss_pred cCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhcc
Q psy10301 216 SLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAID 295 (1119)
Q Consensus 216 ~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1119)
+|||||.|+.|.+ ++.+++||.+.+|+.++.|+++|.+|..++|..++..+.
T Consensus 83 ~LTGEs~pv~k~~--g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~-------------------------- 134 (499)
T TIGR01494 83 NLTGESVPVLKTA--GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGF-------------------------- 134 (499)
T ss_pred cccCCCCCeeecc--CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcC--------------------------
Confidence 9999999999987 456999999999999999999999999999998885432
Q ss_pred ccccccccccccccCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHH
Q psy10301 296 MKPVEVAEKHDEKKSVLQAKLTKLA-IQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLV 374 (1119)
Q Consensus 296 ~k~~~~~~~~~~~~s~lq~kl~~la-~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv 374 (1119)
..++++|.+.++++ .++..+.+++++++++.+...+ . ...+ +...+..++++++
T Consensus 135 -----------~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~-----~-~~~~--------~~~~~~~~~~vl~ 189 (499)
T TIGR01494 135 -----------ETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGL-----W-DPNS--------IFKIFLRALILLV 189 (499)
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c-cccc--------HHHHHHHHHHHHH
Confidence 33688999999988 4554444433333332221110 0 0001 2456778899999
Q ss_pred HhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCCh
Q psy10301 375 VAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPE 454 (1119)
Q Consensus 375 ~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 454 (1119)
++|||+||+++++++.++..+|+++|+++|+++++|+||+++++|||||||||+|+|+|++++..+.
T Consensus 190 ~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------- 256 (499)
T TIGR01494 190 IAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------- 256 (499)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred HHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEE
Q psy10301 455 DIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTV 534 (1119)
Q Consensus 455 ~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvv 534 (1119)
.+..++|.|.|++.++.... .+..||++.+|+|+++
T Consensus 257 -----------------------------~~~s~hp~~~ai~~~~~~~~---------------~~~~~f~~~~~~~~~~ 292 (499)
T TIGR01494 257 -----------------------------EYLSGHPDERALVKSAKWKI---------------LNVFEFSSVRKRMSVI 292 (499)
T ss_pred -----------------------------CcCCCChHHHHHHHHhhhcC---------------cceeccCCCCceEEEE
Confidence 02356899999998875311 2467999999999999
Q ss_pred EecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCC
Q psy10301 535 IPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEG 614 (1119)
Q Consensus 535 v~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~ 614 (1119)
++.+++ .|+||+++.+++.|... .+..+.++.+|+|++++|++.
T Consensus 293 ~~~~~~--~~~~G~~~~i~~~~~~~-------------------~~~~~~~~~~g~~~~~~a~~~--------------- 336 (499)
T TIGR01494 293 VRGPDG--TYVKGAPEFVLSRVKDL-------------------EEKVKELAQSGLRVLAVASKE--------------- 336 (499)
T ss_pred EecCCc--EEEeCCHHHHHHhhHHH-------------------HHHHHHHHhCCCEEEEEEECC---------------
Confidence 986333 47899999999998521 123446788999999999742
Q ss_pred CCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHH
Q psy10301 615 DPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 694 (1119)
Q Consensus 615 ~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~ 694 (1119)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++||
T Consensus 337 --------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------- 386 (499)
T TIGR01494 337 --------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------- 386 (499)
T ss_pred --------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc----------------
Confidence 68999999999999999999999999999999999999999999999997
Q ss_pred HHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccH
Q psy10301 695 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 774 (1119)
Q Consensus 695 ~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~ 774 (1119)
+++++|++|.++|+.+ |..|+.|+|+|||.||+|||++||||||||
T Consensus 387 ------------------------~~~~~p~~K~~~v~~l-----~~~g~~v~~vGDg~nD~~al~~Advgia~~----- 432 (499)
T TIGR01494 387 ------------------------FARVTPEEKAALVEAL-----QKKGRVVAMTGDGVNDAPALKKADVGIAMG----- 432 (499)
T ss_pred ------------------------eeccCHHHHHHHHHHH-----HHCCCEEEEECCChhhHHHHHhCCCccccc-----
Confidence 4788999999999997 456799999999999999999999999997
Q ss_pred HHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHh
Q psy10301 775 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 854 (1119)
Q Consensus 775 ~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~l 854 (1119)
|+++||++++++++..+..++.+||++++++++++.|.+++|++.+++++++.+ +|+++++.+++
T Consensus 433 -a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~--------------~~~~~~~~~~~ 497 (499)
T TIGR01494 433 -AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV--------------LNLVPPGLAAL 497 (499)
T ss_pred -hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHhcchhhh
Confidence 699999999999999999999999999999999999999999998888876542 88888887766
Q ss_pred H
Q psy10301 855 A 855 (1119)
Q Consensus 855 a 855 (1119)
+
T Consensus 498 ~ 498 (499)
T TIGR01494 498 A 498 (499)
T ss_pred c
Confidence 4
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-71 Score=673.72 Aligned_cols=508 Identities=27% Similarity=0.387 Sum_probs=411.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhc-CCCeEEEEe-CCEEEEEEcCCcccCcEEEEcCCCeecccEEE
Q psy10301 127 WIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIE-GEHKFAVIR-QNELKQIFVGDIVVGDICQIKYGDLLPADGIL 204 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~-~~~~~~ViR-~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgil 204 (1119)
|++..++++.+ +.+-..++++.+.|..+.++++.. .++++++++ ||++++|+++||++||+|.|+|||+||+||++
T Consensus 173 yf~~aa~ii~l--~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V 250 (713)
T COG2217 173 YFEEAAMLIFL--FLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV 250 (713)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEE
Confidence 45555544433 334567788888888777776654 356777777 55699999999999999999999999999999
Q ss_pred EeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcc
Q psy10301 205 IQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKK 284 (1119)
Q Consensus 205 l~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~ 284 (1119)
++|+. .||||+|||||.|+.|.+ +..+++||.+.+|..++.|+++|.+|.+++|.+++.+++
T Consensus 251 ~~G~s-~vDeS~iTGEs~PV~k~~--Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq--------------- 312 (713)
T COG2217 251 VSGSS-SVDESMLTGESLPVEKKP--GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQ--------------- 312 (713)
T ss_pred EeCcE-EeecchhhCCCCCEecCC--CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHh---------------
Confidence 99985 899999999999999987 456999999999999999999999999999999997664
Q ss_pred cccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHH
Q psy10301 285 RDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVR 364 (1119)
Q Consensus 285 ~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (1119)
..|+|.|+..++++.++....+++++++++++.+ .. +.+| ..
T Consensus 313 ----------------------~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~---~~-----~~~~--------~~ 354 (713)
T COG2217 313 ----------------------SSKAPIQRLADRVASYFVPVVLVIAALTFALWPL---FG-----GGDW--------ET 354 (713)
T ss_pred ----------------------hCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHH---hc-----CCcH--------HH
Confidence 5689999999999999988777777776663322 11 1234 33
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEee
Q psy10301 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYK 444 (1119)
Q Consensus 365 ~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 444 (1119)
.+..++++|+++|||+|.+++|+++..++.+.+++|+|+|+..++|.++++|+|+||||||||+|+|+|+++...+.
T Consensus 355 a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--- 431 (713)
T COG2217 355 ALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--- 431 (713)
T ss_pred HHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC---
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999875332
Q ss_pred cCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecC
Q psy10301 445 NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTF 524 (1119)
Q Consensus 445 ~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F 524 (1119)
++ .+.|..+.++. ..+.+|.-.|+++.+...+.. .. ...+..|
T Consensus 432 --------~e--~~~L~laAalE-----------------~~S~HPiA~AIv~~a~~~~~~--~~-------~~~~~i~- 474 (713)
T COG2217 432 --------DE--DELLALAAALE-----------------QHSEHPLAKAIVKAAAERGLP--DV-------EDFEEIP- 474 (713)
T ss_pred --------CH--HHHHHHHHHHH-----------------hcCCChHHHHHHHHHHhcCCC--Cc-------cceeeec-
Confidence 11 12232222222 123468889999988765511 00 0022222
Q ss_pred CCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccch
Q psy10301 525 NSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDK 604 (1119)
Q Consensus 525 ~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~ 604 (1119)
.+.+...+ +| ..+.-|.+.-+.+.-.. .+. .....+.+..+|..++.++.
T Consensus 475 ---G~Gv~~~v--~g--~~v~vG~~~~~~~~~~~----------~~~------~~~~~~~~~~~G~t~v~va~------- 524 (713)
T COG2217 475 ---GRGVEAEV--DG--ERVLVGNARLLGEEGID----------LPL------LSERIEALESEGKTVVFVAV------- 524 (713)
T ss_pred ---cCcEEEEE--CC--EEEEEcCHHHHhhcCCC----------ccc------hhhhHHHHHhcCCeEEEEEE-------
Confidence 22333322 33 23344777666432110 000 12345677888988777764
Q ss_pred hhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCc
Q psy10301 605 AEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED 684 (1119)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~ 684 (1119)
|..++|+++++|++||+++++|++||+.|++++|+||||..+|.+||+++||.
T Consensus 525 ----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId----- 577 (713)
T COG2217 525 ----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID----- 577 (713)
T ss_pred ----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----
Confidence 34799999999999999999999999999999999999999999999999993
Q ss_pred eEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc
Q psy10301 685 YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 685 ~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
.++|.+.|+||.++|+.+ |..|++|+|+|||.||+|||++|||
T Consensus 578 --------------------------------~v~AellPedK~~~V~~l-----~~~g~~VamVGDGINDAPALA~AdV 620 (713)
T COG2217 578 --------------------------------EVRAELLPEDKAEIVREL-----QAEGRKVAMVGDGINDAPALAAADV 620 (713)
T ss_pred --------------------------------hheccCCcHHHHHHHHHH-----HhcCCEEEEEeCCchhHHHHhhcCe
Confidence 478999999999999997 5678999999999999999999999
Q ss_pred eEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHH
Q psy10301 765 GFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 827 (1119)
Q Consensus 765 Giamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~ 827 (1119)
||||| +|+|+|+++||++|++|+++.+++++..+|+.+.+|++++.|.+.+|++++.++..+
T Consensus 621 GiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred eEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 799999999999999999999999999999999999999999999999999998877
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-71 Score=689.99 Aligned_cols=519 Identities=22% Similarity=0.333 Sum_probs=414.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEe
Q psy10301 127 WIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQ 206 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~ 206 (1119)
|.+++.+++.+++.-.+..+.+.+.++..++|.+. .+.+++|+|||++++|++++|+|||+|.|++||+|||||++++
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l--~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL--VPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 56666555544444444444444444555555554 3678999999999999999999999999999999999999999
Q ss_pred eCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccc
Q psy10301 207 SNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRD 286 (1119)
Q Consensus 207 g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~ 286 (1119)
|+ ..||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|+|..++.+++
T Consensus 284 g~-~~vdes~lTGEs~Pv~k~~--Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~----------------- 343 (741)
T PRK11033 284 PF-ASFDESALTGESIPVERAT--GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAE----------------- 343 (741)
T ss_pred Cc-EEeecccccCCCCCEecCC--CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhh-----------------
Confidence 97 6999999999999999987 567999999999999999999999999999999886542
Q ss_pred cchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHH
Q psy10301 287 EESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFF 366 (1119)
Q Consensus 287 ~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (1119)
.+++|+|+.+++++.++..+.+.+++++++++...+ +.+| ...+
T Consensus 344 --------------------~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~--------~~~~--------~~~i 387 (741)
T PRK11033 344 --------------------ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF--------AAPW--------QEWI 387 (741)
T ss_pred --------------------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------cCCH--------HHHH
Confidence 468999999999999888877777776655432211 2234 2345
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecC
Q psy10301 367 MVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI 446 (1119)
Q Consensus 367 ~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 446 (1119)
..++++++++|||+|.+++++++..+..+++|+|+++|+++++|+|+++|+||||||||||+|+|+|.+++..+.
T Consensus 388 ~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----- 462 (741)
T PRK11033 388 YRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG----- 462 (741)
T ss_pred HHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC-----
Confidence 678999999999999999999999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCC
Q psy10301 447 PKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNS 526 (1119)
Q Consensus 447 ~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s 526 (1119)
.+++ +++..+.+.. ....+|.+.|+++++...+.+ +||.+
T Consensus 463 -----~~~~--~~l~~aa~~e-----------------~~s~hPia~Ai~~~a~~~~~~----------------~~~~~ 502 (741)
T PRK11033 463 -----ISES--ELLALAAAVE-----------------QGSTHPLAQAIVREAQVRGLA----------------IPEAE 502 (741)
T ss_pred -----CCHH--HHHHHHHHHh-----------------cCCCCHHHHHHHHHHHhcCCC----------------CCCCc
Confidence 1122 1222121111 123578999999988755421 45666
Q ss_pred CcceEEEE-Eec--CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccc
Q psy10301 527 VRKSMSTV-IPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603 (1119)
Q Consensus 527 ~rk~msvv-v~~--~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~ 603 (1119)
+++.+... ++. +|.. +.-|+++.+.+ ++++ ....++.+..+|+|++++|+
T Consensus 503 ~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~~~-----~~~~~~~~~~~g~~~v~va~------ 555 (741)
T PRK11033 503 SQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LADA-----FAGQINELESAGKTVVLVLR------ 555 (741)
T ss_pred ceEEEeeEEEEEEECCEE--EEEecchhhhh--------------ccHH-----HHHHHHHHHhCCCEEEEEEE------
Confidence 77666421 221 4432 22477776532 1111 12345688999999999986
Q ss_pred hhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC
Q psy10301 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683 (1119)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~ 683 (1119)
|.+++|+++++|++|||++++|++|++.|++++|+|||+..+|.++|+++||.
T Consensus 556 -----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---- 608 (741)
T PRK11033 556 -----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---- 608 (741)
T ss_pred -----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence 34799999999999999999999999999999999999999999999999992
Q ss_pred ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC
Q psy10301 684 DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 763 (1119)
Q Consensus 684 ~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad 763 (1119)
.+++..|+||..+|+.++ .+ +.|+|+|||.||+|||++||
T Consensus 609 ----------------------------------~~~~~~p~~K~~~v~~l~-----~~-~~v~mvGDgiNDapAl~~A~ 648 (741)
T PRK11033 609 ----------------------------------FRAGLLPEDKVKAVTELN-----QH-APLAMVGDGINDAPAMKAAS 648 (741)
T ss_pred ----------------------------------eecCCCHHHHHHHHHHHh-----cC-CCEEEEECCHHhHHHHHhCC
Confidence 246678999999999873 22 57999999999999999999
Q ss_pred ceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHH
Q psy10301 764 VGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 843 (1119)
Q Consensus 764 VGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~ 843 (1119)
|||||| +|+++++++||+++.++++..+.+++++||+++.+|++++.|.+.+|++++.++++|.+ . +|
T Consensus 649 vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~----~-------~~ 716 (741)
T PRK11033 649 IGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGIT----G-------LW 716 (741)
T ss_pred eeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----H-------HH
Confidence 999999 89999999999999999999999999999999999999999999999999888876531 1 46
Q ss_pred HHHHHhHHHHh
Q psy10301 844 VNLIMDTLASL 854 (1119)
Q Consensus 844 ~nli~d~l~~l 854 (1119)
+..+.+.+.++
T Consensus 717 ~a~~~~~~ss~ 727 (741)
T PRK11033 717 LAVLADSGATA 727 (741)
T ss_pred HHHHHHcChHH
Confidence 66555555444
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-69 Score=657.81 Aligned_cols=512 Identities=29% Similarity=0.383 Sum_probs=412.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCC-EEEEEEcCCcccCcEEEEcCCCeecccEEEE
Q psy10301 127 WIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQN-ELKQIFVGDIVVGDICQIKYGDLLPADGILI 205 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g-~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill 205 (1119)
|.+++.+++.+++..++..+.+++.++..++|.+. .+.+++|+|+| ++++|+++||+|||+|.+++||.|||||+++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~--~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLAL--APSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 77888777777777666666666666666666654 35789999995 9999999999999999999999999999999
Q ss_pred eeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhccc
Q psy10301 206 QSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKR 285 (1119)
Q Consensus 206 ~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~ 285 (1119)
+|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|+++|.+|+.|+|..++..+
T Consensus 96 ~g~-~~vdes~lTGEs~pv~k~~--g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~----------------- 155 (556)
T TIGR01525 96 SGE-SEVDESALTGESMPVEKKE--GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA----------------- 155 (556)
T ss_pred ecc-eEEeehhccCCCCCEecCC--cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH-----------------
Confidence 997 6999999999999999986 56899999999999999999999999999998877533
Q ss_pred ccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHH
Q psy10301 286 DEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 365 (1119)
Q Consensus 286 ~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (1119)
+.+++|+|+.+++++.++..+.+++++++++++.. .. .+ ..
T Consensus 156 --------------------~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~-------~~---------~~ 196 (556)
T TIGR01525 156 --------------------QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LG-------AL---------GA 196 (556)
T ss_pred --------------------hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc-------cc---------hH
Confidence 14679999999999998877766666655543321 10 00 35
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeec
Q psy10301 366 FMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKN 445 (1119)
Q Consensus 366 ~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 445 (1119)
+..++++++++|||+||++++++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+...
T Consensus 197 ~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-- 274 (556)
T TIGR01525 197 LYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-- 274 (556)
T ss_pred HHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--
Confidence 667889999999999999999999999999999999999999999999999999999999999999999987543210
Q ss_pred CCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCC
Q psy10301 446 IPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFN 525 (1119)
Q Consensus 446 ~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~ 525 (1119)
.+++ +.+..+.++. ....+|.+.|+++++.+.+.+... .+ + .+.+
T Consensus 275 ------~~~~--~~l~~a~~~e-----------------~~~~hp~~~Ai~~~~~~~~~~~~~---~~---~-~~~~--- 319 (556)
T TIGR01525 275 ------ISEE--ELLALAAALE-----------------QSSSHPLARAIVRYAKKRGLELPK---QE---D-VEEV--- 319 (556)
T ss_pred ------ccHH--HHHHHHHHHh-----------------ccCCChHHHHHHHHHHhcCCCccc---cc---C-eeEe---
Confidence 0011 1221111111 113579999999999876543211 00 0 0011
Q ss_pred CCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchh
Q psy10301 526 SVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKA 605 (1119)
Q Consensus 526 s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~ 605 (1119)
.+.++..++||+++..+..|+.... ++.. . + + .+..++.++.+|+|++.+|.
T Consensus 320 -----------~~~gi~~~~~g~~~~~lg~~~~~~~-~~~~--~-~----~-~~~~~~~~~~~g~~~~~v~~-------- 371 (556)
T TIGR01525 320 -----------PGKGVEATVDGQEEVRIGNPRLLEL-AAEP--I-S----A-SPDLLNEGESQGKTVVFVAV-------- 371 (556)
T ss_pred -----------cCCeEEEEECCeeEEEEecHHHHhh-cCCC--c-h----h-hHHHHHHHhhCCcEEEEEEE--------
Confidence 1223455666666666666664311 1111 1 1 1 12345678889999999874
Q ss_pred hhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCcCCCCc
Q psy10301 606 EINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGED 684 (1119)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aG-I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~ 684 (1119)
|.+++|.+.++|++|||++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 372 ---------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----- 425 (556)
T TIGR01525 372 ---------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----- 425 (556)
T ss_pred ---------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----
Confidence 34799999999999999999999999999 999999999999999999999992
Q ss_pred eEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc
Q psy10301 685 YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 685 ~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
.+|+++.|++|..+++.++ ..++.|+|+|||.||++|+++||+
T Consensus 426 --------------------------------~~f~~~~p~~K~~~v~~l~-----~~~~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 426 --------------------------------EVHAELLPEDKLAIVKELQ-----EEGGVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred --------------------------------eeeccCCHHHHHHHHHHHH-----HcCCEEEEEECChhHHHHHhhCCE
Confidence 4678889999999999874 456799999999999999999999
Q ss_pred eEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHH
Q psy10301 765 GFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 828 (1119)
Q Consensus 765 Giamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~ 828 (1119)
|++|| ++++.+++.||+++.++++..+.+++++||+++++|++++.|++.+|++++.+++.|.
T Consensus 469 gia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 469 GIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred eEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 8999999999999999999999999999999999999999999999999998887664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-68 Score=641.69 Aligned_cols=506 Identities=25% Similarity=0.379 Sum_probs=402.9
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCE
Q psy10301 96 ILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNE 175 (1119)
Q Consensus 96 il~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~ 175 (1119)
.+.++++++++++. |++++.|++.+++...+..+++++.++..++|.+. .+++++|+|||+
T Consensus 4 l~~~a~~~~~~~~~-----------------~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~--~~~~~~v~r~g~ 64 (536)
T TIGR01512 4 LMALAALGAVAIGE-----------------YLEGALLLLLFSIGETLEEYASGRARRALKALMEL--APDTARVLRGGS 64 (536)
T ss_pred HHHHHHHHHHHHhh-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEEECCE
Confidence 34566677776542 88998777766666666666666666666666554 367899999999
Q ss_pred EEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEeccc
Q psy10301 176 LKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVN 255 (1119)
Q Consensus 176 ~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~ 255 (1119)
+++|++++|+|||+|.+++||.|||||++++|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|+++|.+
T Consensus 65 ~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~--g~~v~aGt~v~~G~~~~~V~~~g~~ 141 (536)
T TIGR01512 65 LEEVAVEELKVGDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAP--GDEVFAGAINLDGVLTIVVTKLPAD 141 (536)
T ss_pred EEEEEHHHCCCCCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCC--CCEEEeeeEECCceEEEEEEEeccc
Confidence 999999999999999999999999999999996 6999999999999999987 5689999999999999999999999
Q ss_pred chhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 256 SQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTV 335 (1119)
Q Consensus 256 t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ 335 (1119)
|..|+|..++..++ .+++|+|+.+++++.++..+.++++++++
T Consensus 142 t~~~~i~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (536)
T TIGR01512 142 STIAKIVNLVEEAQ-------------------------------------SRKAKTQRFIDRFARYYTPVVLAIALAIW 184 (536)
T ss_pred cHHHHHHHHHHHHh-------------------------------------hCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998775432 45789999999999887766555554433
Q ss_pred HHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCe
Q psy10301 336 VILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 415 (1119)
Q Consensus 336 ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v 415 (1119)
+++ +.. . .| ...+.+++++++++|||+||+++++++..++.+|.|+|+++|+++++|++|++
T Consensus 185 ~~~---~~~-----~--~~--------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v 246 (536)
T TIGR01512 185 LVP---GLL-----K--RW--------PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKI 246 (536)
T ss_pred HHH---HHh-----c--cc--------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCC
Confidence 322 111 0 11 11466788999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHH
Q psy10301 416 TAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECAL 495 (1119)
Q Consensus 416 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~AL 495 (1119)
|++|||||||||+|+|+|.+++. . +++..+.++. ....+|.+.|+
T Consensus 247 ~~i~fDKTGTLT~~~~~v~~~~~---------------~---~~l~~a~~~e-----------------~~~~hp~~~Ai 291 (536)
T TIGR01512 247 KTVAFDKTGTLTTGRPKVVDVVP---------------A---EVLRLAAAAE-----------------QASSHPLARAI 291 (536)
T ss_pred CEEEECCCCCCcCCceEEEEeeH---------------H---HHHHHHHHHh-----------------ccCCCcHHHHH
Confidence 99999999999999999998742 1 1222221111 12347899999
Q ss_pred HHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHH
Q psy10301 496 LGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQG 575 (1119)
Q Consensus 496 l~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~ 575 (1119)
++++.+.+ .... .+.+| .+.+...+ +|.. +..|+++.+.+..
T Consensus 292 ~~~~~~~~-~~~~----------~~~~~----g~gi~~~~--~g~~--~~ig~~~~~~~~~------------------- 333 (536)
T TIGR01512 292 VDYARKRE-NVES----------VEEVP----GEGVRAVV--DGGE--VRIGNPRSLEAAV------------------- 333 (536)
T ss_pred HHHHHhcC-CCcc----------eEEec----CCeEEEEE--CCeE--EEEcCHHHHhhcC-------------------
Confidence 99887543 1100 11111 12233222 2332 2247665442210
Q ss_pred HHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcC
Q psy10301 576 RLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 655 (1119)
Q Consensus 576 ~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aG 655 (1119)
.+.+..+|.+++.++ .|..++|.+.++|++||+++++|++|+++|
T Consensus 334 ------~~~~~~~~~~~~~v~-----------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G 378 (536)
T TIGR01512 334 ------GARPESAGKTIVHVA-----------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALG 378 (536)
T ss_pred ------CcchhhCCCeEEEEE-----------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcC
Confidence 013445666665553 356899999999999999999999999999
Q ss_pred C-EEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHH
Q psy10301 656 I-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGM 734 (1119)
Q Consensus 656 I-~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l 734 (1119)
+ +++|+|||+..++..+++++|+. .+|++..|++|..+++.+
T Consensus 379 i~~v~vvTgd~~~~a~~i~~~lgi~-------------------------------------~~f~~~~p~~K~~~i~~l 421 (536)
T TIGR01512 379 IEKVVMLTGDRRAVAERVARELGID-------------------------------------EVHAELLPEDKLEIVKEL 421 (536)
T ss_pred CCcEEEEcCCCHHHHHHHHHHcCCh-------------------------------------hhhhccCcHHHHHHHHHH
Confidence 9 99999999999999999999993 356788899999999987
Q ss_pred HHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHH
Q psy10301 735 IDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 814 (1119)
Q Consensus 735 ~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l 814 (1119)
+..++.|+|+|||.||++|+++||+|++||.++++.++++||+++.++++..+.+++.+||+++++|++++.|++
T Consensus 422 -----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~ 496 (536)
T TIGR01512 422 -----REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIAL 496 (536)
T ss_pred -----HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999778999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHH
Q psy10301 815 TVNVVAVIVAFIGA 828 (1119)
Q Consensus 815 ~~nv~~i~~~f~~~ 828 (1119)
.+|++++.++++|.
T Consensus 497 ~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 497 GIILLLILLALFGV 510 (536)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988763
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-66 Score=630.03 Aligned_cols=543 Identities=27% Similarity=0.362 Sum_probs=409.6
Q ss_pred ccHHHHHHHHhhHHH---HHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy10301 79 KTFLQLVWEALQDVT---LIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQF 155 (1119)
Q Consensus 79 ~~f~~l~~~~~~~~~---~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~ 155 (1119)
.+|++-.|+.++... -....++.+.+++++.|....+... .+....+|++.+++++.++. +...++++.++|..
T Consensus 3 ~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~--~g~~le~~~~~~a~ 79 (562)
T TIGR01511 3 RPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVL-TGLHVHTFFDASAMLITFIL--LGRWLEMLAKGRAS 79 (562)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccc-cccccchhHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 356666676665321 2223344445555444321110000 00011357777766554433 23455666555555
Q ss_pred HHHhhhhc-CCCeEEEEeC-CEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCCcc
Q psy10301 156 RGLQNQIE-GEHKFAVIRQ-NELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPM 233 (1119)
Q Consensus 156 ~~L~~~~~-~~~~~~ViR~-g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~ 233 (1119)
+.+++... .+.+++|+|+ |++++|++++|+|||+|.|++||.|||||++++|+ ..||||+|||||.|+.|.+ ++.
T Consensus 80 ~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~-~~vdes~lTGEs~pv~k~~--gd~ 156 (562)
T TIGR01511 80 DALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE-SEVDESLVTGESLPVPKKV--GDP 156 (562)
T ss_pred HHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc-eEEehHhhcCCCCcEEcCC--CCE
Confidence 55544332 3568889985 67799999999999999999999999999999997 5999999999999999987 467
Q ss_pred ccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchH
Q psy10301 234 VLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQ 313 (1119)
Q Consensus 234 l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq 313 (1119)
+|+||.+.+|.++++|+++|.+|..|+|..++..++ .+++++|
T Consensus 157 V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~-------------------------------------~~k~~~~ 199 (562)
T TIGR01511 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQ-------------------------------------QSKAPIQ 199 (562)
T ss_pred EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHH-------------------------------------hcCCchH
Confidence 999999999999999999999999999999886432 4578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy10301 314 AKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSV 393 (1119)
Q Consensus 314 ~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~ 393 (1119)
+..++++.++..+.++++++++++ | ...+..++++++++|||+|++++|+++..++
T Consensus 200 ~~~d~~a~~~~~~v~~~a~~~~~~----------------~--------~~~~~~~~svlvvacPcaL~la~p~a~~~~~ 255 (562)
T TIGR01511 200 RLADKVAGYFVPVVIAIALITFVI----------------W--------LFALEFAVTVLIIACPCALGLATPTVIAVAT 255 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------------H--------HHHHHHHHHHHHHhccchhhhHHHHHHHHHH
Confidence 999999987766555554443332 1 1245678999999999999999999999999
Q ss_pred HHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccc
Q psy10301 394 KKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSK 473 (1119)
Q Consensus 394 ~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~ 473 (1119)
.+++++|+++|+++++|+|+++|+||||||||||+|+|+|.++...+. .+++ +++..+.++..
T Consensus 256 ~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~----------~~~~--~~l~~aa~~e~----- 318 (562)
T TIGR01511 256 GLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD----------RDRT--ELLALAAALEA----- 318 (562)
T ss_pred HHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC----------CCHH--HHHHHHHHHhc-----
Confidence 999999999999999999999999999999999999999998864321 1111 12221111111
Q ss_pred cccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHH
Q psy10301 474 IMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIIL 553 (1119)
Q Consensus 474 ~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il 553 (1119)
...+|.+.|+++++.+.+....... . .+.+| .+.+...+ +|. -+..|+++.+.
T Consensus 319 ------------~s~HPia~Ai~~~~~~~~~~~~~~~------~-~~~~~----g~Gi~~~~--~g~--~~~iG~~~~~~ 371 (562)
T TIGR01511 319 ------------GSEHPLAKAIVSYAKEKGITLVEVS------D-FKAIP----GIGVEGTV--EGT--KIQLGNEKLLG 371 (562)
T ss_pred ------------cCCChHHHHHHHHHHhcCCCcCCCC------C-eEEEC----CceEEEEE--CCE--EEEEECHHHHH
Confidence 1237899999999876653321110 0 11111 33444433 232 23457776653
Q ss_pred hhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEE
Q psy10301 554 KKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCV 633 (1119)
Q Consensus 554 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~ 633 (1119)
+. +. .++ ++.++|.+++.++ .|.+++|+
T Consensus 372 ~~--------~~--~~~-------------~~~~~g~~~~~~~-----------------------------~~~~~~g~ 399 (562)
T TIGR01511 372 EN--------AI--KID-------------GKAEQGSTSVLVA-----------------------------VNGELAGV 399 (562)
T ss_pred hC--------CC--CCC-------------hhhhCCCEEEEEE-----------------------------ECCEEEEE
Confidence 21 11 011 1235788887765 25689999
Q ss_pred eeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 634 IGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 634 igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
++++|++||+++++|++|++.|++++|+|||+..++..+++++||
T Consensus 400 ~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi----------------------------------- 444 (562)
T TIGR01511 400 FALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI----------------------------------- 444 (562)
T ss_pred EEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC-----------------------------------
Confidence 999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 714 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 714 ~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
.++++..|++|.++++.++ ..++.|+|+|||.||+||+++||+|++|| .+++.++++||+++.++++..+.
T Consensus 445 ---~~~~~~~p~~K~~~v~~l~-----~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~ 515 (562)
T TIGR01511 445 ---NVRAEVLPDDKAALIKELQ-----EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVA 515 (562)
T ss_pred ---cEEccCChHHHHHHHHHHH-----HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHH
Confidence 1467778999999999874 46789999999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHH
Q psy10301 794 KAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 828 (1119)
Q Consensus 794 ~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~ 828 (1119)
.++++||+++++|++++.|.+.+|++.+.+++.+.
T Consensus 516 ~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 516 TAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999988887543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-67 Score=620.40 Aligned_cols=525 Identities=26% Similarity=0.345 Sum_probs=412.8
Q ss_pred hhhhHHHHHHHHHHHHHHHH-HHHhHHHHHHHHhhhhc-CCCeEEEEeCCE-EEEEEcCCcccCcEEEEcCCCeecccEE
Q psy10301 127 WIEGAAILVSVIVVVLVTAF-NDYSKEKQFRGLQNQIE-GEHKFAVIRQNE-LKQIFVGDIVVGDICQIKYGDLLPADGI 203 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~-~~~~~~k~~~~L~~~~~-~~~~~~ViR~g~-~~~I~~~dLvvGDIV~l~~Gd~vPaDgi 203 (1119)
++|...+++.++. ++-| +...|.|.-..+.+++. .+.++.++.+|+ .++|+++.|.+||+|.|.||++||+||+
T Consensus 340 fFdt~~MLi~fi~---lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 340 FFDTSPMLITFIT---LGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred hccccHHHHHHHH---HHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 5555555554332 3333 33344455555555543 367889999996 8999999999999999999999999999
Q ss_pred EEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhc
Q psy10301 204 LIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKK 283 (1119)
Q Consensus 204 ll~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~ 283 (1119)
+++|+ ..||||++|||+.|+.|.+ +..+.+||.+..|.....+|.+|.+|.+++|.+|+++++
T Consensus 417 Vv~Gs-s~VDEs~iTGEs~PV~Kk~--gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ-------------- 479 (951)
T KOG0207|consen 417 VVDGS-SEVDESLITGESMPVPKKK--GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQ-------------- 479 (951)
T ss_pred EEeCc-eeechhhccCCceecccCC--CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHH--------------
Confidence 99998 5999999999999999987 567999999999999999999999999999999997654
Q ss_pred ccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHH
Q psy10301 284 KRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 363 (1119)
Q Consensus 284 ~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~ 363 (1119)
..|.|+|+..++++.++.++.+++++++++++++...+.... ... +...+.
T Consensus 480 -----------------------~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~--~~~----~~~~~~ 530 (951)
T KOG0207|consen 480 -----------------------LSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKY--PRS----FFDAFS 530 (951)
T ss_pred -----------------------cccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccC--cch----hhHHHH
Confidence 568999999999999999988888888777766543221111 112 235566
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEe
Q psy10301 364 RFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 443 (1119)
Q Consensus 364 ~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 443 (1119)
..|..+++++++||||+|.++.|++...+....+++|+|+|..+++|.+.++++|.||||||||+|+++|+++......
T Consensus 531 ~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~- 609 (951)
T KOG0207|consen 531 HAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP- 609 (951)
T ss_pred HHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc-
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeec
Q psy10301 444 KNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT 523 (1119)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~ 523 (1119)
.+.. +.+....+..+ ...+|.-.|+..++.+.... ..+ ..+...-.
T Consensus 610 --------~~~~--e~l~~v~a~Es-----------------~SeHPig~AIv~yak~~~~~------~~~-~~~~~~~~ 655 (951)
T KOG0207|consen 610 --------ISLK--EALALVAAMES-----------------GSEHPIGKAIVDYAKEKLVE------PNP-EGVLSFEY 655 (951)
T ss_pred --------ccHH--HHHHHHHHHhc-----------------CCcCchHHHHHHHHHhcccc------cCc-cccceeec
Confidence 1222 12211111111 12467889999999876511 111 11112222
Q ss_pred CCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccc
Q psy10301 524 FNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603 (1119)
Q Consensus 524 F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~ 603 (1119)
|.-..+...+.+ ++.- .+-|.-+.+... |...+ ++ .+...+.-...|..+.++|+
T Consensus 656 ~pg~g~~~~~~~--~~~~--i~iGN~~~~~r~--------~~~~~--~~-----i~~~~~~~e~~g~tvv~v~v------ 710 (951)
T KOG0207|consen 656 FPGEGIYVTVTV--DGNE--VLIGNKEWMSRN--------GCSIP--DD-----ILDALTESERKGQTVVYVAV------ 710 (951)
T ss_pred ccCCCcccceEE--eeeE--EeechHHHHHhc--------CCCCc--hh-----HHHhhhhHhhcCceEEEEEE------
Confidence 322222211111 1211 233655555432 22211 11 23345566678888888875
Q ss_pred hhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC
Q psy10301 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683 (1119)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~ 683 (1119)
|-+++|+++++|++|||+..+|+.||+.||+++|+||||..+|+++|+++||.
T Consensus 711 -----------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---- 763 (951)
T KOG0207|consen 711 -----------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---- 763 (951)
T ss_pred -----------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----
Confidence 44799999999999999999999999999999999999999999999999972
Q ss_pred ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC
Q psy10301 684 DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 763 (1119)
Q Consensus 684 ~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad 763 (1119)
.|+|...|+||.+.|+.+ |+++..|+|+|||+||+|||.+||
T Consensus 764 ---------------------------------~V~aev~P~~K~~~Ik~l-----q~~~~~VaMVGDGINDaPALA~Ad 805 (951)
T KOG0207|consen 764 ---------------------------------NVYAEVLPEQKAEKIKEI-----QKNGGPVAMVGDGINDAPALAQAD 805 (951)
T ss_pred ---------------------------------eEEeccCchhhHHHHHHH-----HhcCCcEEEEeCCCCccHHHHhhc
Confidence 689999999999999997 567799999999999999999999
Q ss_pred ceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHH
Q psy10301 764 VGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFI 826 (1119)
Q Consensus 764 VGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~ 826 (1119)
|||+|| .|+++|.++||++|+.+++..++.+|..+|+...||+.++.|.+++|++++.++..
T Consensus 806 VGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 806 VGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred cceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 999999 78999999999999999999999999999999999999999999999999888754
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=650.63 Aligned_cols=508 Identities=25% Similarity=0.352 Sum_probs=405.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhc-CCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEE
Q psy10301 126 EWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIE-GEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGIL 204 (1119)
Q Consensus 126 ~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~-~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgil 204 (1119)
.|++.+++++.+ +.+...++++.++|..+.+++... .+.+++|+|+|++++|+.++|+|||+|.|++||+|||||++
T Consensus 284 ~~~~~~~~i~~~--~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v 361 (834)
T PRK10671 284 LYYEASAMIIGL--INLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEI 361 (834)
T ss_pred hhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEE
Confidence 377766554443 334566677777776666665543 36789999999999999999999999999999999999999
Q ss_pred EeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcc
Q psy10301 205 IQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKK 284 (1119)
Q Consensus 205 l~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~ 284 (1119)
++|+ ..||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|+|..++..++
T Consensus 362 ~~g~-~~vdeS~lTGEs~pv~k~~--gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~--------------- 423 (834)
T PRK10671 362 TQGE-AWLDEAMLTGEPIPQQKGE--GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQ--------------- 423 (834)
T ss_pred EEce-EEEeehhhcCCCCCEecCC--CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHh---------------
Confidence 9996 7999999999999999987 467999999999999999999999999999999886542
Q ss_pred cccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHH
Q psy10301 285 RDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVR 364 (1119)
Q Consensus 285 ~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (1119)
..++++|+..++++.++..+.+++++++++++. ... ++ ..+..
T Consensus 424 ----------------------~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~---~~~-------~~-----~~~~~ 466 (834)
T PRK10671 424 ----------------------SSKPEIGQLADKISAVFVPVVVVIALVSAAIWY---FFG-------PA-----PQIVY 466 (834)
T ss_pred ----------------------ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhC-------Cc-----hHHHH
Confidence 457889999999988776666655555444332 111 01 01234
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEee
Q psy10301 365 FFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYK 444 (1119)
Q Consensus 365 ~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 444 (1119)
.+.+++++++++|||+|++++|+++..++.+++++|+++|+++++|+||++|++|||||||||+|+|+|.++...+.
T Consensus 467 ~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--- 543 (834)
T PRK10671 467 TLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--- 543 (834)
T ss_pred HHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC---
Confidence 56778999999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred cCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecC
Q psy10301 445 NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTF 524 (1119)
Q Consensus 445 ~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F 524 (1119)
.++. +.+..+.+++. ...+|.+.|+++++..... + +...|
T Consensus 544 -------~~~~--~~l~~a~~~e~-----------------~s~hp~a~Ai~~~~~~~~~---------~-----~~~~~ 583 (834)
T PRK10671 544 -------VDEA--QALRLAAALEQ-----------------GSSHPLARAILDKAGDMTL---------P-----QVNGF 583 (834)
T ss_pred -------CCHH--HHHHHHHHHhC-----------------CCCCHHHHHHHHHHhhCCC---------C-----Ccccc
Confidence 1111 22222222221 1247899999987753211 1 01122
Q ss_pred CCCc-ceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccc
Q psy10301 525 NSVR-KSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603 (1119)
Q Consensus 525 ~s~r-k~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~ 603 (1119)
.... +.+...+ +|. .+.+|+++.+.+... .. ++ ++..++.++.+|.+++.+|+
T Consensus 584 ~~~~g~Gv~~~~--~g~--~~~~G~~~~~~~~~~------------~~---~~-~~~~~~~~~~~g~~~v~va~------ 637 (834)
T PRK10671 584 RTLRGLGVSGEA--EGH--ALLLGNQALLNEQQV------------DT---KA-LEAEITAQASQGATPVLLAV------ 637 (834)
T ss_pred eEecceEEEEEE--CCE--EEEEeCHHHHHHcCC------------Ch---HH-HHHHHHHHHhCCCeEEEEEE------
Confidence 2211 2333322 343 245699987643211 11 11 23456678899999999985
Q ss_pred hhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC
Q psy10301 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683 (1119)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~ 683 (1119)
|..++|+++++|++||+++++|++|++.|++++|+|||+..++..+++++||.
T Consensus 638 -----------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~---- 690 (834)
T PRK10671 638 -----------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID---- 690 (834)
T ss_pred -----------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC----
Confidence 23689999999999999999999999999999999999999999999999993
Q ss_pred ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC
Q psy10301 684 DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 763 (1119)
Q Consensus 684 ~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad 763 (1119)
.++++..|++|.++++.+ +..++.|+|+|||.||+||++.||
T Consensus 691 ---------------------------------~~~~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Ag 732 (834)
T PRK10671 691 ---------------------------------EVIAGVLPDGKAEAIKRL-----QSQGRQVAMVGDGINDAPALAQAD 732 (834)
T ss_pred ---------------------------------EEEeCCCHHHHHHHHHHH-----hhcCCEEEEEeCCHHHHHHHHhCC
Confidence 467889999999999986 556889999999999999999999
Q ss_pred ceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q psy10301 764 VGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 825 (1119)
Q Consensus 764 VGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f 825 (1119)
+|++|| +|++.++++||++++++++..|..++++||..+.+|++++.|.+.+|++++.+++
T Consensus 733 vgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 733 VGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred eeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999999999999999999999988876
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-54 Score=479.90 Aligned_cols=589 Identities=24% Similarity=0.320 Sum_probs=405.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhhhh--hHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCC
Q psy10301 89 LQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKYEWIE--GAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEH 166 (1119)
Q Consensus 89 ~~~~~~iil~iaailsl~l~~~~~~~~~~~~~~~~~~~~~e--~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~ 166 (1119)
.++|..++.++.+++++++.++..... ..+ ....|.- .+.+++.+++..+..++-+-+-+.|...|++-.. +.
T Consensus 30 ~kNPVMFvv~vg~~lt~~l~~~~~lfg---~~~-~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~-~~ 104 (681)
T COG2216 30 VKNPVMFVVEVGSILTTFLTIFPDLFG---GTG-GSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKT-ET 104 (681)
T ss_pred hhCCeEEeehHHHHHHHHHHHhhhhcC---CCC-cchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH-HH
Confidence 345655566667777665444322111 001 1112221 2223334444455556666666666666665432 45
Q ss_pred eEEEEeC-CEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCC-ccccccceeeecc
Q psy10301 167 KFAVIRQ-NELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFD-PMVLSGTHVMEGS 244 (1119)
Q Consensus 167 ~~~ViR~-g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~-~~l~sGt~v~~G~ 244 (1119)
..+++++ |.++.+++.+|..||+|.|+.||+||+||.+++|.. .||||++||||-||-|.++.| .-+-.||.|.+.+
T Consensus 105 ~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~ 183 (681)
T COG2216 105 IARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDW 183 (681)
T ss_pred HHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeee
Confidence 5677776 899999999999999999999999999999999984 999999999999999987533 3588999999999
Q ss_pred eEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHH
Q psy10301 245 GKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIG 324 (1119)
Q Consensus 245 ~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~ 324 (1119)
.+.++++.-..|.+.++..+++.++ .+|||-+-.|+. .
T Consensus 184 l~irita~pG~sFlDrMI~LVEgA~-------------------------------------R~KTPNEIAL~i-----L 221 (681)
T COG2216 184 LKIRITANPGETFLDRMIALVEGAE-------------------------------------RQKTPNEIALTI-----L 221 (681)
T ss_pred EEEEEEcCCCccHHHHHHHHhhchh-------------------------------------ccCChhHHHHHH-----H
Confidence 9999999999999999999987653 567885544443 2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhcccccc
Q psy10301 325 YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVR 404 (1119)
Q Consensus 325 ~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr 404 (1119)
..++.+..++++. ..+.+..|.. +.+. .+..-++++|..+|..+.-.++--=..++.|+.+-|++.+
T Consensus 222 L~~LTliFL~~~~--Tl~p~a~y~~-g~~~----------~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~ 288 (681)
T COG2216 222 LSGLTLIFLLAVA--TLYPFAIYSG-GGAA----------SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIAT 288 (681)
T ss_pred HHHHHHHHHHHHH--hhhhHHHHcC-CCCc----------CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeec
Confidence 2233222222111 1111122211 1111 1223467888899988776666655678899999999999
Q ss_pred chhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCc
Q psy10301 405 HLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484 (1119)
Q Consensus 405 ~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~ 484 (1119)
+..++|..|.+|++..|||||+|-|.=...+.+.... .+ .+.+..+..+.|-+. +
T Consensus 289 SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----------v~---~~~la~aa~lsSl~D------e------ 343 (681)
T COG2216 289 SGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----------VS---EEELADAAQLASLAD------E------ 343 (681)
T ss_pred CcchhhhcCCccEEEecccCceeecchhhhheecCCC----------CC---HHHHHHHHHHhhhcc------C------
Confidence 9999999999999999999999986544444433221 11 122333333333221 1
Q ss_pred ccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCC
Q psy10301 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNG 564 (1119)
Q Consensus 485 ~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~ 564 (1119)
.|.-..++.++++.+.+....... ......||+.+.+ ||-+--.++ +-.-|||.+.+.+..+. .+|
T Consensus 344 ----TpEGrSIV~LA~~~~~~~~~~~~~----~~~~fvpFtA~TR-mSGvd~~~~--~~irKGA~dai~~~v~~---~~g 409 (681)
T COG2216 344 ----TPEGRSIVELAKKLGIELREDDLQ----SHAEFVPFTAQTR-MSGVDLPGG--REIRKGAVDAIRRYVRE---RGG 409 (681)
T ss_pred ----CCCcccHHHHHHHhccCCCccccc----ccceeeecceecc-cccccCCCC--ceeecccHHHHHHHHHh---cCC
Confidence 123345778888776433221111 0134579987765 555543333 56779999999988763 223
Q ss_pred eeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccH
Q psy10301 565 HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEV 644 (1119)
Q Consensus 565 ~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v 644 (1119)
.. ++ + ++...++-++.|=..|+++. |-.++|++.++|-++|+.
T Consensus 410 ~~---p~-~----l~~~~~~vs~~GGTPL~V~~-----------------------------~~~~~GVI~LkDivK~Gi 452 (681)
T COG2216 410 HI---PE-D----LDAAVDEVSRLGGTPLVVVE-----------------------------NGRILGVIYLKDIVKPGI 452 (681)
T ss_pred CC---CH-H----HHHHHHHHHhcCCCceEEEE-----------------------------CCEEEEEEEehhhcchhH
Confidence 21 11 1 34556788889998888863 457999999999999999
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecCh
Q psy10301 645 PEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSP 724 (1119)
Q Consensus 645 ~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP 724 (1119)
+|-+.+||+.|||.+|+||||+.||..||++.|+. ...|.++|
T Consensus 453 ~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD-------------------------------------dfiAeatP 495 (681)
T COG2216 453 KERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------------------------DFIAEATP 495 (681)
T ss_pred HHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-------------------------------------hhhhcCCh
Confidence 99999999999999999999999999999999993 24688999
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 804 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~ 804 (1119)
|+|.++|+.- |..|+.|+|||||+||+|||.+||||+||. +||.+||||+.++=+|.|...+.+.+..|+...-
T Consensus 496 EdK~~~I~~e-----Q~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 496 EDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred HHHHHHHHHH-----HhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 9999999874 788999999999999999999999999999 9999999999999999999999999999987543
Q ss_pred HhHHHHHHHHhch---hHHHHHHHHHHhc---------cCCCChhHHH-HHHHH-HHHhHHHHhHhc
Q psy10301 805 SISKFLQFQLTVN---VVAVIVAFIGACA---------VQDSPLKAVQ-MLWVN-LIMDTLASLALA 857 (1119)
Q Consensus 805 ~i~k~i~f~l~~n---v~~i~~~f~~~~~---------~~~spL~~~q-~L~~n-li~d~l~~laL~ 857 (1119)
.=-..-.|++..- ..+++.+.+.+++ ...||-+++- -+.+| +|.-.+..|||-
T Consensus 570 TRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlk 636 (681)
T COG2216 570 TRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALK 636 (681)
T ss_pred ecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 2111222222211 1234444443332 2357766653 33445 444555566664
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=297.04 Aligned_cols=226 Identities=35% Similarity=0.534 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEE
Q psy10301 133 ILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKI 212 (1119)
Q Consensus 133 il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~V 212 (1119)
+++.+++..++..+++++++++.+++++... +..++|+|||++++++++||+|||||.|++||.+||||++++++.+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNP-QKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS-SEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCC-CccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 4556667778889999999999999887653 334999999999999999999999999999999999999999556899
Q ss_pred ecccCCCCCcccccC---CCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhcccccch
Q psy10301 213 DESSLTGESDHVKKG---ELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDEES 289 (1119)
Q Consensus 213 DES~LTGES~pv~K~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1119)
|||.+|||+.|+.|. .+.++++|+||.+.+|.+.++|++||.+|..|++.......
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--------------------- 139 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--------------------- 139 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS---------------------
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccc---------------------
Confidence 999999999999998 22478999999999999999999999999999988776432
Q ss_pred hhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHHHHHHHH
Q psy10301 290 AIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVG 369 (1119)
Q Consensus 290 ~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (1119)
+.++++++..+++++..+..+.++++++++ ++++.. ....+| ...+..+
T Consensus 140 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~--------~~~~~~~ 188 (230)
T PF00122_consen 140 ----------------ESKKSPLERKLNKIAKILIIIILAIAILVF---IIWFFN----DSGISF--------FKSFLFA 188 (230)
T ss_dssp ----------------CSS-THHHHHHHHHHHHHHHHHHHHHHHHH---HHCHTG----STTCHC--------CHHHHHH
T ss_pred ----------------cccchhhhhhhHHHHHHHHhcccccchhhh---ccceec----cccccc--------ccccccc
Confidence 245689999999998887665554444333 222211 122233 3456678
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhh
Q psy10301 370 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACET 411 (1119)
Q Consensus 370 i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~ 411 (1119)
++++++++|++||+++++++.+++++|.++|+++|+++++|+
T Consensus 189 i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 189 ISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 899999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=219.17 Aligned_cols=180 Identities=30% Similarity=0.482 Sum_probs=146.0
Q ss_pred CCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy10301 833 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPT 912 (1119)
Q Consensus 833 ~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 912 (1119)
|+||+++|+||+|+++|++|+++++.|||++++|+|||++++++++++++++.++.+|+++++++++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999988887766444332
Q ss_pred CCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhc--cccceeccc
Q psy10301 913 GRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSL 990 (1119)
Q Consensus 913 ~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l 990 (1119)
... +....+++|++|++++++|++|.+++|+.+++...|+++++|++++.++++++++|+++++.+ +.+|++.++
T Consensus 81 ~~~---~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l 157 (182)
T PF00689_consen 81 ETN---NDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPL 157 (182)
T ss_dssp HHH---TTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----
T ss_pred ccc---hhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCC
Confidence 100 011235899999999999999999999966433333588899999999999999999999986 588999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHh
Q psy10301 991 TLEQWGWCLFFGVGTLVWQQIVTTV 1015 (1119)
Q Consensus 991 ~~~~w~~~~~~~~~~l~~~~~vk~i 1015 (1119)
++.+|+++++++++.++++|++|++
T Consensus 158 ~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 158 PLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=205.96 Aligned_cols=97 Identities=41% Similarity=0.658 Sum_probs=89.6
Q ss_pred CcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhH
Q psy10301 627 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ 706 (1119)
Q Consensus 627 dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 706 (1119)
++.++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 57899999999999999999999999999999999999999999999999992
Q ss_pred HHHhhhcCceEEEEec--ChhhH--HHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC
Q psy10301 707 NLLDKVWPRLRVLARS--SPSDK--YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 763 (1119)
Q Consensus 707 ~~~~~i~~~~~v~ar~--sP~~K--~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad 763 (1119)
+..+++++ +|++| .++++.+ +..++.|+|+|||.||++|+++||
T Consensus 168 --------~~~v~a~~~~kP~~k~~~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --------DSIVFARVIGKPEPKIFLRIIKEL-----QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------SEEEEESHETTTHHHHHHHHHHHH-----TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --------cccccccccccccchhHHHHHHHH-----hcCCCEEEEEccCHHHHHHHHhCc
Confidence 23689999 99999 8888885 656679999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-17 Score=187.10 Aligned_cols=456 Identities=14% Similarity=0.203 Sum_probs=278.7
Q ss_pred CccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHH--hhccCceEEEEEeecccchhh------------hhcccc
Q psy10301 547 GASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPM--ACDGLRTISIAYKDFVTDKAE------------INQVHI 612 (1119)
Q Consensus 547 GA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--a~~GlRtl~lAyr~l~~~~~~------------~~~~~~ 612 (1119)
|-.+.+.+.|+.+++ +.+..|++..+|++. .+.| ++-.-.++++|||...-.-.. .....+
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV----~DFY~RaclsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI 772 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKV----KDFYLRACLSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSKI 772 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHH----HHHHHHHhhcccchheecccHHHHHHHHhCCceEEeccCcccchh
Confidence 556788899999997 567788888777654 2333 344447899999964311000 000000
Q ss_pred --------------C-CCCCCC------------cccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy10301 613 --------------E-GDPNWD------------DESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 665 (1119)
Q Consensus 613 --------------~-~~~~~~------------~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~ 665 (1119)
+ .+..|+ +.+...++.+|.|++..+.+.+++....|+.|.++.||.+.++-++
T Consensus 773 ~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 773 ETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKED 852 (1354)
T ss_pred hhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchH
Confidence 0 000011 0123457889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcCCCCceEEEecH------------------------hHHHHhhcC-chhh-----------h----
Q psy10301 666 INTARSIATKCGIVKPGEDYLILEGK------------------------EFNRRVRDN-NGEV-----------Q---- 705 (1119)
Q Consensus 666 ~~ta~~ia~~~Gi~~~~~~~i~l~g~------------------------~~~~~~~~~-~~~~-----------~---- 705 (1119)
....+-+|.++||...+++-+.+.-. ++++...++ .++. +
T Consensus 853 ELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ 932 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKM 932 (1354)
T ss_pred HHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccc
Confidence 99999999999998877766655321 122211111 0000 0
Q ss_pred --------------------------HHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcC--CHH
Q psy10301 706 --------------------------QNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN--DGP 757 (1119)
Q Consensus 706 --------------------------~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~N--D~~ 757 (1119)
-++++++..-+..|..++|+.-.++++.+ |++|+++++.|...| ..-
T Consensus 933 dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIM-----QE~GEVtcclGS~aN~rNSc 1007 (1354)
T KOG4383|consen 933 DSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIM-----QENGEVTCCLGSCANARNSC 1007 (1354)
T ss_pred ccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHH-----HHcCcEEEEeccccccccce
Confidence 01233333344589999999999999987 678999999999998 445
Q ss_pred hhhcCCceEEEccC------------ccHH-H-----------------HhccCeeeccCChhHHHHHHHHHHHHHHHhH
Q psy10301 758 ALKKADVGFAMGIT------------GTDV-A-----------------KEASDIILTDDNFSSIVKAVMWGRNVYDSIS 807 (1119)
Q Consensus 758 aLk~AdVGiamg~~------------g~~~-a-----------------k~aaDiil~d~~f~~i~~~i~~GR~~~~~i~ 807 (1119)
.+-+||++||+..- ++.. . .-++|+-+.....-.|.++|+.+|.....++
T Consensus 1008 iflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R 1087 (1354)
T KOG4383|consen 1008 IFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFR 1087 (1354)
T ss_pred EEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhH
Confidence 67899999998410 1111 1 1134444444445578888999999999999
Q ss_pred HHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhH-hccCCCCcccccCCC-C-------CCCCCcc
Q psy10301 808 KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA-LATEMPTPDLLLRKP-Y-------GRTKALI 878 (1119)
Q Consensus 808 k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~la-L~~e~p~~~l~~r~P-~-------~~~~~li 878 (1119)
+++.|.+...+..+++.|+..++..+.-++-.|++|..++-..+..++ |-+.+|.+.+|-+.. . ..+...+
T Consensus 1088 ~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fl 1167 (1354)
T KOG4383|consen 1088 HCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFL 1167 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHH
Confidence 999999999999999999998888888889999999999887777776 656666666654432 1 1111222
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHh--hccCCC--------CCCCC--CCC-C-----CCCcchhhhhHHHHHHHhhhc
Q psy10301 879 SKTMMKNIIGQAIYQLVIIFGILFFG--DKLLDI--------PTGRG--AEY-G-----SLPTQHFTIIFNTFVLMTLFN 940 (1119)
Q Consensus 879 ~~~~~~~i~~~~i~~~~~~~~~~~~~--~~~~~~--------~~~~~--~~~-~-----~~~~~~~t~~f~~~v~~q~fn 940 (1119)
.-..|+..+ . +....++|.++... ..+.+. ..+.. ..+ . .....++...-.-.+...+|-
T Consensus 1168 lcFilkFsl-s-~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifi 1245 (1354)
T KOG4383|consen 1168 LCFILKFSL-S-ASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFI 1245 (1354)
T ss_pred HHHHHHhhh-h-HHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhhee
Confidence 222222211 1 22223344333321 111111 01100 000 0 000111222222233333443
Q ss_pred ccccccccCccccc-cccccchhHHHHHHHH----HHHHHHHHhhc-----cccceecccChhhHHHHHHHHHHHHHHHH
Q psy10301 941 EINARKIHGQRNVF-EGLFTNPIFYSIWVIT----MVSQVIIVQYG-----GIAFATHSLTLEQWGWCLFFGVGTLVWQQ 1010 (1119)
Q Consensus 941 ~~~~r~~~~~~~~f-~~~~~n~~~~~~~~~~----~~~~~~~v~~~-----~~~f~~~~l~~~~w~~~~~~~~~~l~~~~ 1010 (1119)
.+. .+|..++.+ +...+|.||-+.+-.. .+...+..|++ |.-|+....++..|++..+.-+++.+.++
T Consensus 1246 qIT--hih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNE 1323 (1354)
T KOG4383|consen 1246 QIT--HIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNE 1323 (1354)
T ss_pred EEE--EEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhh
Confidence 332 344444544 4667777664422211 11222233443 44566677778889888888788888899
Q ss_pred HHHHhc
Q psy10301 1011 IVTTVP 1016 (1119)
Q Consensus 1011 ~vk~i~ 1016 (1119)
++|...
T Consensus 1324 iiKihe 1329 (1354)
T KOG4383|consen 1324 IIKIHE 1329 (1354)
T ss_pred HHHHHH
Confidence 998653
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-13 Score=125.67 Aligned_cols=71 Identities=37% Similarity=0.610 Sum_probs=59.8
Q ss_pred cccChhHHHHHHHHHHcC--CChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccc
Q psy10301 486 QVGNKTECALLGFVVAIG--KNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYI 559 (1119)
Q Consensus 486 ~~g~~~E~ALl~~~~~~g--~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~ 559 (1119)
..|+|+|+||+.|+..+| .++...+.. +++++.+||||+||+|+||+++++.+.+|+|||||.|+++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~---~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSK---YKIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhh---cceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 789999999999999995 445555544 45688999999999999999954457779999999999999864
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.8e-12 Score=118.18 Aligned_cols=126 Identities=25% Similarity=0.348 Sum_probs=106.7
Q ss_pred cEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHH
Q psy10301 628 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707 (1119)
Q Consensus 628 l~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 707 (1119)
+...+.++---++=++|+++|+.|++. ++|++.|||..-+....|+-.||-
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~---------------------------- 69 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP---------------------------- 69 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc----------------------------
Confidence 346677777788899999999999999 999999999999999999999982
Q ss_pred HHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccC--ccHHHHhccCeeec
Q psy10301 708 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT--GTDVAKEASDIILT 785 (1119)
Q Consensus 708 ~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~--g~~~ak~aaDiil~ 785 (1119)
.-++++...|+.|..+++.| +.+++.|.|+|||.||.+||+.||+||..=.+ ..+-+.++||+++.
T Consensus 70 -------~~rv~a~a~~e~K~~ii~eL-----kk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 70 -------VERVFAGADPEMKAKIIREL-----KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -------eeeeecccCHHHHHHHHHHh-----cCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 22789999999999999986 66889999999999999999999999975322 23456789999998
Q ss_pred cCChhHHHHHH
Q psy10301 786 DDNFSSIVKAV 796 (1119)
Q Consensus 786 d~~f~~i~~~i 796 (1119)
+...++.++
T Consensus 138 --~i~e~ldl~ 146 (152)
T COG4087 138 --EIAEILDLL 146 (152)
T ss_pred --hHHHHHHHh
Confidence 566665553
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.8e-12 Score=110.84 Aligned_cols=67 Identities=31% Similarity=0.538 Sum_probs=64.3
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHH
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVS 104 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaails 104 (1119)
..+++++++.|+||..+||+ ++|+++||++||+|.+++++++++|+.++++|.+++.++|+++|++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs--~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLS--SEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBT--HHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCC--HHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 36789999999999999999 99999999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.4e-11 Score=101.58 Aligned_cols=62 Identities=29% Similarity=0.401 Sum_probs=58.3
Q ss_pred HhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy10301 45 KLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLS 108 (1119)
Q Consensus 45 ~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~ 108 (1119)
.|++|++.||+ ++|+++|+++||+|++++++++++|++++++|.++++++|+++|++|++++
T Consensus 2 ~l~~~~~~GLs--~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLS--SEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCC--HHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47889988999 899999999999999999999999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF12424 ATP_Ca_trans_C: Plasma membrane calcium transporter ATPase C terminal; InterPro: IPR022141 This domain family is found in eukaryotes, and is approximately 60 amino acids in length | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.6e-12 Score=106.61 Aligned_cols=47 Identities=47% Similarity=0.716 Sum_probs=15.5
Q ss_pred hhhhhccchhhhHHHHHHHHHHHhhh---hhhhhhhhhhhHHHHhhccCC
Q psy10301 1045 AHILWLRGLTRLQTQLRVIRAFKSNL---EDLEERRSAQSLRSARSQLGN 1091 (1119)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 1091 (1119)
||+||+||+||+|+|||||||||+++ +.++++.|.+|+|++|+|+..
T Consensus 1 gq~lw~rgl~r~QtQIrVV~AFrs~l~~~~~~~~~~S~~Slh~~~t~~~~ 50 (66)
T PF12424_consen 1 GQILWFRGLNRIQTQIRVVNAFRSSLSRYEGLRRPESLASLHSFMTHPEF 50 (66)
T ss_dssp TCCCHHHHHHHHHHCH----------------------------------
T ss_pred CCEEEEeCCCccHhHHHHHHHHcCCcccCCccccCccccccccccccccc
Confidence 68999999999999999999999997 448889999999999998876
|
The family is found in association with PF00689 from PFAM, PF00122 from PFAM, PF00702 from PFAM, PF00690 from PFAM. There is a conserved QTQ sequence motif. This family is the C-terminal of a calcium transporting ATPase located in the plasma membrane. ; GO: 0005388 calcium-transporting ATPase activity; PDB: 2KNE_B 1CFF_B. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=122.03 Aligned_cols=70 Identities=27% Similarity=0.323 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|..-++.+.++ ++...+.|+++|||.||.+||+.|+.|+||| ++.+.+|++||+|..+++-.++.++|+
T Consensus 196 sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEH-LGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 688888888765 4666678999999999999999999999999 999999999999999888889888875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-09 Score=119.88 Aligned_cols=154 Identities=24% Similarity=0.348 Sum_probs=111.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH-----------------HHH---hhc
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF-----------------NRR---VRD 699 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~-----------------~~~---~~~ 699 (1119)
+.+.+.++|+++++.|++++++||++...++.+.+++|+.. .+++.+|... ... ..+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999853 3333333210 000 000
Q ss_pred C----------c------------------------------------------hhhhHH---HHhhhcC-ceEEEEecC
Q psy10301 700 N----------N------------------------------------------GEVQQN---LLDKVWP-RLRVLARSS 723 (1119)
Q Consensus 700 ~----------~------------------------------------------~~~~~~---~~~~i~~-~~~v~ar~s 723 (1119)
. . .....+ .+.+... ....+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 0 0 000000 1111111 223333333
Q ss_pred h---------hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHH
Q psy10301 724 P---------SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 724 P---------~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
+ .+|...++.+.+. ++...+.|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.++.+
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~-lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~ 255 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKL-LGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAE 255 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHH-hCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHH
Confidence 3 2799999999874 5666667999999999999999999999999 889999999998889999999999
Q ss_pred HHHH
Q psy10301 795 AVMW 798 (1119)
Q Consensus 795 ~i~~ 798 (1119)
+|++
T Consensus 256 ~l~~ 259 (264)
T COG0561 256 ALEK 259 (264)
T ss_pred HHHH
Confidence 8874
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-09 Score=115.03 Aligned_cols=154 Identities=23% Similarity=0.301 Sum_probs=108.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh-----------------HHHH---hh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE-----------------FNRR---VR 698 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~-----------------~~~~---~~ 698 (1119)
++.+.+.++|+++++.|++++++||++...+..+++.+|+.. .+++.+|.. .... ..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 378899999999999999999999999999999999999732 222222210 0000 00
Q ss_pred c-----------Cch-----------hhh----HHHHhhhcCceEE-----EEecChh--hHHHHHHHHHHhhcCCCCCE
Q psy10301 699 D-----------NNG-----------EVQ----QNLLDKVWPRLRV-----LARSSPS--DKYTLVKGMIDSKISAGREV 745 (1119)
Q Consensus 699 ~-----------~~~-----------~~~----~~~~~~i~~~~~v-----~ar~sP~--~K~~iV~~l~~~~~~~~~~~ 745 (1119)
. ... ... .+.+++......+ +....|. +|...++.+.++ ++...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~-~~i~~~~ 175 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL-MGIDPEE 175 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH-hCCCHHH
Confidence 0 000 000 0111111111211 1233343 499999988775 4666678
Q ss_pred EEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 746 VAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 746 V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
++++||+.||.+|++.|++|+||| ++.+.+|++||++..+++-.++.++|+
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999999999 999999999999999888889988875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.3e-09 Score=116.53 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCe--eeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI--ILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDi--il~d~~f~~i~~~i~ 797 (1119)
+|..-++.+.++ ++...+.|+++|||.||.+||+.|+.||||| ++.+.+|++||+ ++.+++-.++.++|+
T Consensus 188 sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQH-LGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHH-hCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 699999988765 4666778999999999999999999999999 999999999996 677788888888875
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.3e-09 Score=113.57 Aligned_cols=152 Identities=21% Similarity=0.259 Sum_probs=104.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHH--------------HHhh---c--
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN--------------RRVR---D-- 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~--------------~~~~---~-- 699 (1119)
.+.+++.++|++|++.|++++++||++...+..+++.+++..+ +++.+|..+. .... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~---~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP---VVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc---EEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 4889999999999999999999999999999999999987422 2222221000 0000 0
Q ss_pred --------Cc---------hhhhHHHHhhhcC--ceEE-----EEecC--hhhHHHHHHHHHHhhcCCCCCEEEEEcCCc
Q psy10301 700 --------NN---------GEVQQNLLDKVWP--RLRV-----LARSS--PSDKYTLVKGMIDSKISAGREVVAVTGDGT 753 (1119)
Q Consensus 700 --------~~---------~~~~~~~~~~i~~--~~~v-----~ar~s--P~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ 753 (1119)
.. ..-..+.+.+... .+.+ +...+ ..+|...++.+.+. ++...+.++++||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKEL-LGIKPEEVAAIGDSE 173 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECCCH
Confidence 00 0000011111111 1111 11222 35899999998765 455666799999999
Q ss_pred CCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 754 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 754 ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
||.+|++.|+.|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 174 ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 174 NDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999 9999999999999987777776654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-08 Score=114.45 Aligned_cols=70 Identities=17% Similarity=0.211 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccC--eeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD--IILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaD--iil~d~~f~~i~~~i~ 797 (1119)
+|..-++.+.++ ++...+.|+++|||.||.+||+.|+.|+||| ++.+.+|++|| .++.+++-.++.++|+
T Consensus 190 sKg~al~~l~~~-lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKK-LGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 688888888765 4666678999999999999999999999999 99999999988 6777888888888875
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.9e-09 Score=112.67 Aligned_cols=154 Identities=21% Similarity=0.260 Sum_probs=104.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH-------------------HHHhhc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF-------------------NRRVRD 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~-------------------~~~~~~ 699 (1119)
.+.+.+.++|++++++|++++++||++...+..+++++|+.. .+++.+|... ......
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477889999999999999999999999999999999999521 2222222100 000000
Q ss_pred Cc--------------h--h----hhHH----HHhhhcCceEE-----EEecCh--hhHHHHHHHHHHhhcCCCCCEEEE
Q psy10301 700 NN--------------G--E----VQQN----LLDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVAV 748 (1119)
Q Consensus 700 ~~--------------~--~----~~~~----~~~~i~~~~~v-----~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~ 748 (1119)
.. . . ...+ .++.......+ +....| .+|...++.+.++ ++...+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~ 170 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEK-LGIKPGETLV 170 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHH-hCCCHHHEEE
Confidence 00 0 0 0001 11111111111 112223 3799999988765 4556678999
Q ss_pred EcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhH----HHHHHH
Q psy10301 749 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS----IVKAVM 797 (1119)
Q Consensus 749 iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~----i~~~i~ 797 (1119)
+||+.||.+|++.|++|+||+ ++.+.+|+.||++..+++-.+ +...++
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999 999999999999998777777 655554
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-08 Score=112.31 Aligned_cols=154 Identities=27% Similarity=0.400 Sum_probs=108.0
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH------------------HHHh--
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------------NRRV-- 697 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~------------------~~~~-- 697 (1119)
..+.+++.+++++++++|++++++||++...+..+..++++. ..+++.+|.-. ..++
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 347789999999999999999999999999999999999984 22333333111 0000
Q ss_pred -hc----------------Cc--------------------------------------hhh---hHHHHhhhcCceEEE
Q psy10301 698 -RD----------------NN--------------------------------------GEV---QQNLLDKVWPRLRVL 719 (1119)
Q Consensus 698 -~~----------------~~--------------------------------------~~~---~~~~~~~i~~~~~v~ 719 (1119)
.. .. .+. ..+.+.+.......+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 00 00 000 011122222221122
Q ss_pred Ee-------cCh--hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChh
Q psy10301 720 AR-------SSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFS 790 (1119)
Q Consensus 720 ar-------~sP--~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~ 790 (1119)
.+ .+| .+|...++.+.+. ++...+.++++||+.||.+||+.|+.|+||+ ++++..|..||+++.+.+-.
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~-~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~ 248 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEY-LGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDD 248 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHH-HTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCT
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhh-cccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCC
Confidence 22 233 4899999999865 4666678999999999999999999999999 99999999999999987778
Q ss_pred HHHHHH
Q psy10301 791 SIVKAV 796 (1119)
Q Consensus 791 ~i~~~i 796 (1119)
++.++|
T Consensus 249 gv~~~i 254 (254)
T PF08282_consen 249 GVAKAI 254 (254)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 888764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-08 Score=120.99 Aligned_cols=70 Identities=24% Similarity=0.406 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|..-++.+.++ ++...+.|+++|||.||.+||+.|+.||||| |+.+.+|++||+|..+++-.++.++|+
T Consensus 507 SKG~ALk~L~e~-lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNH-LGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHH-cCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 577777777655 4556678999999999999999999999999 999999999999999888899988876
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.8e-08 Score=107.63 Aligned_cols=70 Identities=26% Similarity=0.365 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.++ ++...+.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|+
T Consensus 199 ~K~~~l~~l~~~-~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEA-QGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 588878777655 4555677999999999999999999999999 888999999999999888889988875
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.3e-08 Score=112.29 Aligned_cols=133 Identities=20% Similarity=0.285 Sum_probs=100.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceE-EEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL-ILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..--.+.+ +.+|.- . ..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l------------t----------g~ 238 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL------------T----------GN 238 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE------------E----------eE
Confidence 589999999999999999999999999888899999999832100001 011100 0 00
Q ss_pred EEE-ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 718 VLA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 718 v~a-r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
+.. -+..+.|.+.++.+.+. ++...+.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++.++..++
T Consensus 239 v~g~iv~~k~K~~~L~~la~~-lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 239 VLGDIVDAQYKADTLTRLAQE-YEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ecCccCCcccHHHHHHHHHHH-cCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 110 02346789888888654 355567899999999999999999999999 68899999999999988888887654
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.69 E-value=7e-08 Score=104.35 Aligned_cols=133 Identities=20% Similarity=0.253 Sum_probs=96.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..--...+..++..+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~---------------------~~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT---------------------GLV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE---------------------EEe
Confidence 68999999999999999999999999999999999999984211110110000000 001
Q ss_pred EEe-cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 719 LAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~ar-~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
.++ ..+..|..+++.+.+. ++...+.+.++||+.||.+|++.|+++++++ +.+..+++||+++.+++|..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRK-EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHH-cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 111 1233477777766544 2444456888999999999999999999985 678889999999999999888654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=105.09 Aligned_cols=71 Identities=18% Similarity=0.103 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhhcCCC--CCEEEEEcCCcCCHHhhhcCCceEEEccCcc---HHHHhc---cCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAG--REVVAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEA---SDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~--~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~---~~ak~a---aDiil~d~~f~~i~~~i~ 797 (1119)
.|...++.+.+. ++.. .+.++++||+.||.+||+.|+.|+||+ ++. +..|+. ++++..+++-.++.++++
T Consensus 176 ~Kg~ai~~l~~~-~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQF-YNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHH-HhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 788888888765 3555 678999999999999999999999999 776 467876 458888888899988876
Q ss_pred H
Q psy10301 798 W 798 (1119)
Q Consensus 798 ~ 798 (1119)
+
T Consensus 254 ~ 254 (256)
T TIGR01486 254 H 254 (256)
T ss_pred H
Confidence 3
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.7e-07 Score=99.88 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=91.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..--.+-+..++. +.+. . ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~----------g~~t--------G--~~ 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS----------DRVV--------G--YQ 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC----------CeeE--------C--ee
Confidence 58999999999999975 99999999999999999999983211100111100 0000 0 01
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
. ..|+.|...++.+++ .+..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.+
T Consensus 127 ~--~~~~~K~~~l~~l~~-----~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 127 L--RQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred e--cCcchHHHHHHHHHh-----hCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 1 357789999998742 3456889999999999999999999996 555555555443333467777777765
Q ss_pred H
Q psy10301 799 G 799 (1119)
Q Consensus 799 G 799 (1119)
.
T Consensus 198 ~ 198 (203)
T TIGR02137 198 A 198 (203)
T ss_pred H
Confidence 4
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=104.49 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHhhcCC---CCCEEEEEcCCcCCHHhhhcCCceEEEccCcc-HH-----HHhccCeeeccCChhHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISA---GREVVAVTGDGTNDGPALKKADVGFAMGITGT-DV-----AKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~---~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~-~~-----ak~aaDiil~d~~f~~i~~~ 795 (1119)
-+|..-++.+.++ ++. ..+.|+++|||.||.+||+.|++||||| ++. +. .+..+|++....+-+++.++
T Consensus 186 ~sKg~al~~l~~~-lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 186 AGKDQAANWLIAT-YQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCHHHHHHHHHHH-HHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 3788888888776 455 6678999999999999999999999999 343 31 45579999988888888888
Q ss_pred HHH
Q psy10301 796 VMW 798 (1119)
Q Consensus 796 i~~ 798 (1119)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 763
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.7e-07 Score=104.10 Aligned_cols=68 Identities=26% Similarity=0.365 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
+|..-++.+.+. +....+.++++||+.||.+|++.|+.|+||+ ++.+.+|+.||+++.+++-.++.++
T Consensus 188 ~K~~~i~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEA-LGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHH-cCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 699999988765 4556678999999999999999999999999 8999999999999998887777654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-07 Score=97.11 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=81.2
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... .
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------------------------~f~~~--k 81 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------------------------FHEGI--K 81 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------------------------EEecC--C
Confidence 68999999999999999999999999999999931 11111 1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~ 788 (1119)
.|...++.+.+. ++...+.++++||+.||.+|++.|++++||+ ++.+.++..|++++.+++
T Consensus 82 pkp~~~~~~~~~-l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 82 KKTEPYAQMLEE-MNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred CCHHHHHHHHHH-cCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 233344444433 3555577999999999999999999999999 899999999999987544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-07 Score=92.59 Aligned_cols=101 Identities=19% Similarity=0.310 Sum_probs=81.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+|++|++.|+++.++||++...+..++++.|+.. + +.. ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~----~---------------------------------~~~--~~~ 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH----L---------------------------------YQG--QSN 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----E---------------------------------Eec--ccc
Confidence 9999999999999999999999999999999831 0 111 123
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~ 788 (1119)
|...++.+.++ ++...+.++++||+.||.+|++.|+++++|. ++.+..+..+|+++..+.
T Consensus 77 k~~~~~~~~~~-~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 77 KLIAFSDILEK-LALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 55566665443 3555678999999999999999999999998 788889999999998554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.5e-07 Score=96.43 Aligned_cols=123 Identities=20% Similarity=0.258 Sum_probs=89.8
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEE-ecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL-EGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l-~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-.+.+.. +| .+. -
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~lt---------------------G 133 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLT---------------------G 133 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEe---------------------c
Confidence 689999999999999999999999999999999999999995322221111 11 010 1
Q ss_pred EEEEe-cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeec
Q psy10301 717 RVLAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 785 (1119)
Q Consensus 717 ~v~ar-~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~ 785 (1119)
.+..+ +..+.|...++.+.+. ++..-+.+.++|||.||.|||+.|+.+++.+ +....+..++...-
T Consensus 134 ~v~g~~~~~~~K~~~l~~~~~~-~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 134 RVVGPICDGEGKAKALRELAAE-LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeeeeecCcchHHHHHHHHHHH-cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 23333 3457899988877654 3444557888899999999999999999985 55555555554443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.4e-07 Score=98.14 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccC----eeeccCChhHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD----IILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaD----iil~d~~f~~i~~~i~~ 798 (1119)
.|...++.+.++ ++.....++++||+.||.+|++.|+.||+|+ ++.+..|+.|| ++...++-.++.++|.+
T Consensus 159 ~K~~al~~l~~~-~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYR-WGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 788899888765 3444557889999999999999999999999 89999999999 77777777888888763
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.7e-07 Score=93.89 Aligned_cols=115 Identities=17% Similarity=0.288 Sum_probs=89.0
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ..+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------------------------~f~--g~~ 95 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------------------------LYQ--GQS 95 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------------------------eec--CCC
Confidence 69999999999999999999999999999999831 111 123
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccC----ChhHHHHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDD----NFSSIVKAVMWGRN 801 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~----~f~~i~~~i~~GR~ 801 (1119)
+|...++.+.+. ++...+.++|+||+.||.+|++.|+++++++ ++.+..+..+|+++... .+..+.+.+...|-
T Consensus 96 ~k~~~l~~~~~~-~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 96 NKLIAFSDLLEK-LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred cHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 466666666554 3555678999999999999999999999987 77888889999999643 24555655554443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.8e-06 Score=95.24 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHhhcCCCC-CEEEEEcCCcCCHHhhhcCCceEEEccCccHHHH----hcc-Ceee--ccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK----EAS-DIIL--TDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~-~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak----~aa-Diil--~d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++... +.|+++||+.||.+|++.|++|+||+ |+.+..| .++ +.+. ..++-.++.++|.
T Consensus 190 ~Kg~al~~l~~~-~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKEL-YRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHH-HhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 788888887665 45666 89999999999999999999999999 9999988 666 6776 4556778877765
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.6e-06 Score=89.49 Aligned_cols=121 Identities=21% Similarity=0.307 Sum_probs=84.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..--...+..+ + .+... +. .
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~--~--------~g~~~--------p~--~ 139 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFD--E--------KGFIQ--------PD--G 139 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEc--C--------CCeEe--------cc--e
Confidence 589999999999999999999999999999999999999731100111110 0 00000 11 1
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 781 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaD 781 (1119)
+....|..|..+++.+.+. ++...+.++++||+.||.+|++.|+++++++ .+....+.|+|
T Consensus 140 ~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 140 IVRVTFDNKGEAVERLKRE-LNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeEEccccHHHHHHHHHHH-hCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 1223466788777776543 3444567999999999999999999999997 44444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.7e-06 Score=81.55 Aligned_cols=122 Identities=20% Similarity=0.323 Sum_probs=99.8
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
-.|+.++++||++-++||++..-...-|+++||- .+|- --+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~-------------------------------------~~~q--G~~ 82 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK-------------------------------------HLYQ--GIS 82 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc-------------------------------------eeee--chH
Confidence 4789999999999999999999999999999993 1111 245
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC----hhHHHHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 801 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~----f~~i~~~i~~GR~ 801 (1119)
+|....+.+.+. ++-.-+.|+++||..||.|+|++.+.++|.. ++.+..++.||+++.... ++.+.++|..++.
T Consensus 83 dK~~a~~~L~~~-~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 83 DKLAAFEELLKK-LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred hHHHHHHHHHHH-hCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 677777777654 4667788999999999999999999999998 888999999999998543 6677778888887
Q ss_pred HHHHhHH
Q psy10301 802 VYDSISK 808 (1119)
Q Consensus 802 ~~~~i~k 808 (1119)
.++...+
T Consensus 161 ~~d~~~~ 167 (170)
T COG1778 161 KLDEALG 167 (170)
T ss_pred cHHHHHh
Confidence 7776554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1e-05 Score=89.33 Aligned_cols=157 Identities=12% Similarity=0.161 Sum_probs=102.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH------------------------
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------------------ 693 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~------------------------ 693 (1119)
.++.|...++++++++.|+.++.+||+.....+.+.+++++..++ -+++-+|..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 457789999999999999999999999999999999999986542 1222222211
Q ss_pred -HHHhhc-------C--c-----------hhhhH---HHHhhhc----CceEE-EE-----ecCh--hhHHHHHHHHHHh
Q psy10301 694 -NRRVRD-------N--N-----------GEVQQ---NLLDKVW----PRLRV-LA-----RSSP--SDKYTLVKGMIDS 737 (1119)
Q Consensus 694 -~~~~~~-------~--~-----------~~~~~---~~~~~i~----~~~~v-~a-----r~sP--~~K~~iV~~l~~~ 737 (1119)
...... . . ....+ ..+.+.. .+..+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000000 0 0 00000 0111111 11221 11 2233 4799999988765
Q ss_pred hcCCCCCEEEEEcCCcCCHHhhhc-CCceEEEccCccHHHHhccC-------eeeccCChhHHHHHHH
Q psy10301 738 KISAGREVVAVTGDGTNDGPALKK-ADVGFAMGITGTDVAKEASD-------IILTDDNFSSIVKAVM 797 (1119)
Q Consensus 738 ~~~~~~~~V~~iGDG~ND~~aLk~-AdVGiamg~~g~~~ak~aaD-------iil~d~~f~~i~~~i~ 797 (1119)
++...+.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.+++.
T Consensus 179 -~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 -LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred -cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 45567789999999999999998 67999999 88888876543 5444555677777765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.4e-05 Score=85.43 Aligned_cols=126 Identities=17% Similarity=0.183 Sum_probs=88.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+..--...+..++.. .+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------------~i 122 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------------------MI 122 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------------------eE
Confidence 4689999999999999 9999999999999999999999832111111111000 01
Q ss_pred EE--ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCe-eeccCChhHHHHH
Q psy10301 719 LA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI-ILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~a--r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDi-il~d~~f~~i~~~ 795 (1119)
.. -..|+.|...++.+. ..++.++|+|||.||.+|.+.|++|+..+ .+.+.....++. ++. ++..+...
T Consensus 123 ~~~~~~~p~~k~~~l~~~~-----~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~ 194 (205)
T PRK13582 123 TGYDLRQPDGKRQAVKALK-----SLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAA 194 (205)
T ss_pred ECccccccchHHHHHHHHH-----HhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHH
Confidence 00 123677877777653 34578999999999999999999999876 343344455665 444 67777665
Q ss_pred HH
Q psy10301 796 VM 797 (1119)
Q Consensus 796 i~ 797 (1119)
+.
T Consensus 195 l~ 196 (205)
T PRK13582 195 ID 196 (205)
T ss_pred HH
Confidence 54
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00064 Score=81.60 Aligned_cols=98 Identities=16% Similarity=0.265 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+. +.++.-++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~---------------------------- 120 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDG---------------------------- 120 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCC----------------------------
Confidence 58899999999999999999999999999999999999983 22211111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 774 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~ 774 (1119)
..++.|+.|...++.. +.+ +.+.++||+.||.|+++.|+-.++++ .+..
T Consensus 121 ~~~~kg~~K~~~l~~~----l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 121 TTNLKGAAKAAALVEA----FGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred ccccCCchHHHHHHHH----hCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 0134567776655432 232 22567899999999999999999997 4433
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.7e-05 Score=89.93 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=95.0
Q ss_pred cHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH------------HHH-------------
Q psy10301 643 EVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------NRR------------- 696 (1119)
Q Consensus 643 ~v~~aI-~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~------------~~~------------- 696 (1119)
....++ +++++.|+.+++.||+.......+.++.++..|+ -.++-+|.++ ...
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~ 110 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEE 110 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHH
Confidence 344555 8899999999999999999999999999987663 1121122111 000
Q ss_pred hhcC--------c------------hhhhH---HHHhhhc----CceEE------EEecChh--hHHHHHHHHHHhhc--
Q psy10301 697 VRDN--------N------------GEVQQ---NLLDKVW----PRLRV------LARSSPS--DKYTLVKGMIDSKI-- 739 (1119)
Q Consensus 697 ~~~~--------~------------~~~~~---~~~~~i~----~~~~v------~ar~sP~--~K~~iV~~l~~~~~-- 739 (1119)
.... . ..... +.+.+.. ..+.+ +-...|. .|...++.+.+. +
T Consensus 111 ~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~-~~~ 189 (413)
T PLN02382 111 TSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK-LKA 189 (413)
T ss_pred HhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH-hhh
Confidence 0000 0 00000 1111111 11221 1233443 699999998775 3
Q ss_pred -CCCCCEEEEEcCCcCCHHhhhcCC-ceEEEccCccHHHHhcc--------Ceeec-cCChhHHHHHHH
Q psy10301 740 -SAGREVVAVTGDGTNDGPALKKAD-VGFAMGITGTDVAKEAS--------DIILT-DDNFSSIVKAVM 797 (1119)
Q Consensus 740 -~~~~~~V~~iGDG~ND~~aLk~Ad-VGiamg~~g~~~ak~aa--------Diil~-d~~f~~i~~~i~ 797 (1119)
+...+.++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-.+|.++|.
T Consensus 190 ~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 190 EGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred cCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 445668899999999999999999 699999 8998888743 44433 334556666654
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.3e-05 Score=79.23 Aligned_cols=112 Identities=20% Similarity=0.294 Sum_probs=77.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+-|++++.+..|++.|.+|.++||--..-+..+|.++||...+-..-.+ .-+..++..- ++.. .-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l--------~fd~~Gk~~g--fd~~----~p 153 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANEL--------LFDKDGKYLG--FDTN----EP 153 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhhee--------eeccCCcccc--cccC----Cc
Confidence 36799999999999999999999999999999999999994321100000 0001111000 0000 00
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg 769 (1119)
-+...-|..++..+++ +.+...++|+|||+||.+|+..||.=|+.|
T Consensus 154 --tsdsggKa~~i~~lrk---~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 154 --TSDSGGKAEVIALLRK---NYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --cccCCccHHHHHHHHh---CCChheeEEecCCccccccCCchhhhhccC
Confidence 1123478999988765 567789999999999999999988766555
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00012 Score=79.55 Aligned_cols=130 Identities=22% Similarity=0.340 Sum_probs=84.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.. ..++. +.-.+. ..+ .+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~--~~~~~-~~~~~~-----~~g--------------~~ 141 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP--ENIFA-NQILFG-----DSG--------------EY 141 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh--hhEEE-eEEEEc-----CCC--------------cE
Confidence 478999999999999999999999999999999999999942 11110 000000 000 00
Q ss_pred EEe------cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhc--CCceEEEccCc-cHHHHhccCeeeccCCh
Q psy10301 719 LAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK--ADVGFAMGITG-TDVAKEASDIILTDDNF 789 (1119)
Q Consensus 719 ~ar------~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~--AdVGiamg~~g-~~~ak~aaDiil~d~~f 789 (1119)
.+. +....|...++.+.+. ++ .+.++++||+.||..|.+. ++++++.|... .+.....+|+++. ++
T Consensus 142 ~g~~~~~~~~~~~~K~~~i~~~~~~-~~--~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~ 216 (224)
T PLN02954 142 AGFDENEPTSRSGGKAEAVQHIKKK-HG--YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DF 216 (224)
T ss_pred ECccCCCcccCCccHHHHHHHHHHH-cC--CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CH
Confidence 000 1123477777776543 22 2568899999999999777 56666655222 2334456899887 67
Q ss_pred hHHHHH
Q psy10301 790 SSIVKA 795 (1119)
Q Consensus 790 ~~i~~~ 795 (1119)
..+.+.
T Consensus 217 ~el~~~ 222 (224)
T PLN02954 217 QDLIEV 222 (224)
T ss_pred HHHHHh
Confidence 666543
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.4e-05 Score=82.90 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=38.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
+..-+++.++|++|+++|++++++||+....+..+.+++|+.
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 455667999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.1e-05 Score=81.06 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=35.7
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 641 r~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
-+.+.++|++++++|++++++||+....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344889999999999999999999999999999999973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.8e-05 Score=80.91 Aligned_cols=96 Identities=26% Similarity=0.291 Sum_probs=70.6
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEe
Q psy10301 642 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 721 (1119)
Q Consensus 642 ~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar 721 (1119)
+++.+.|+.++++|++++++||+....+..+++.+|+.. ..+++.+. .-. .......+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~-------------------~~~~~~~~ 149 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDN-------------------GGGIFTGR 149 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECT-------------------TCCEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eec-------------------ccceeeee
Confidence 788899999999999999999999999999999999942 12222211 000 01234455
Q ss_pred cChh-h--HHHHHHHHH--HhhcCCCCCEEEEEcCCcCCHHhhh
Q psy10301 722 SSPS-D--KYTLVKGMI--DSKISAGREVVAVTGDGTNDGPALK 760 (1119)
Q Consensus 722 ~sP~-~--K~~iV~~l~--~~~~~~~~~~V~~iGDG~ND~~aLk 760 (1119)
.+|. + |...++.++ ... +.....+.++|||.||.||||
T Consensus 150 ~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 150 ITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 5555 4 999999882 211 456789999999999999986
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00017 Score=77.87 Aligned_cols=133 Identities=15% Similarity=0.147 Sum_probs=85.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceE----EEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL----ILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. ..+. ..+|..+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~~~~~~----------------~~ 129 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSNEYIHI----------------DW 129 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeCCeeEE----------------eC
Confidence 479999999999999999999999999999999998887542 1111 122221110 00
Q ss_pred CceEEE--EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHH--hccCeeeccCCh
Q psy10301 714 PRLRVL--ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK--EASDIILTDDNF 789 (1119)
Q Consensus 714 ~~~~v~--ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak--~aaDiil~d~~f 789 (1119)
+.-..+ .......|..+++.+. ...+.+.|+|||.||.+|++.||+.+|=+ .-.+-.+ ..+.+.. ++|
T Consensus 130 p~~~~~~~~~~cg~~K~~~l~~~~-----~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f 201 (214)
T TIGR03333 130 PHPCDGTCQNQCGCCKPSLIRKLS-----EPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDF 201 (214)
T ss_pred CCCCccccccCCCCCHHHHHHHHh-----hcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCH
Confidence 000000 0111346889988763 34567899999999999999999988744 1112111 1223333 378
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+...++
T Consensus 202 ~di~~~l~ 209 (214)
T TIGR03333 202 YDVRKELE 209 (214)
T ss_pred HHHHHHHH
Confidence 88877664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.76 E-value=9.3e-05 Score=78.88 Aligned_cols=112 Identities=16% Similarity=0.180 Sum_probs=78.5
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
..+++|++.+.++.+++.|++++++||-....+..+++.+|+.. ++.. ++. .+.++... .
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~----~~~~---~l~---~~~~g~~~--------g-- 144 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN----AIGT---RLE---ESEDGIYT--------G-- 144 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc----eEec---ceE---EcCCCEEe--------C--
Confidence 45689999999999999999999999999999999999999832 1110 000 00000000 0
Q ss_pred EEE-EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEc
Q psy10301 717 RVL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769 (1119)
Q Consensus 717 ~v~-ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg 769 (1119)
++. -.+.++.|...++.+.+. .+...+.+.++||+.+|.||++.|+.++++.
T Consensus 145 ~~~~~~~~g~~K~~~l~~~~~~-~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 NIDGNNCKGEGKVHALAELLAE-EQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CccCCCCCChHHHHHHHHHHHH-cCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 000 123467888888777543 2334457888999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00012 Score=76.02 Aligned_cols=105 Identities=24% Similarity=0.275 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..--.+.+..+. ++.+.. ....+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~----------~g~~~g----~~~~~--- 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDD----------NGLLTG----PIEGQ--- 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECC----------CCEEeC----ccCCc---
Confidence 3689999999999999999999999999999999999998421111111100 000000 00000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A 762 (1119)
..+.+..|...++.+.+.. +...+.+.++|||.||.+|++.|
T Consensus 136 -~~~~~~~K~~~l~~~~~~~-~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 -VNPEGECKGKVLKELLEES-KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -ccCCcchHHHHHHHHHHHh-CCCHHHEEEEeCCHHHHHHHhcC
Confidence 1234678999998876542 33456789999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=75.83 Aligned_cols=128 Identities=19% Similarity=0.295 Sum_probs=87.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-+. ++.+.+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------------- 144 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGDS------------------------- 144 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCCC-------------------------
Confidence 35889999999999999999999999999999999999998422111 111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc-eEEE--ccC-ccHHHHhccCeeeccCChhHHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAM--GIT-GTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV-Giam--g~~-g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
+.+..|. ..+++.+.+. ++...+.++++||+.||+.+.+.|++ ++.+ |.. ..+.....+|+++. ++..+.
T Consensus 145 -~~~~kp~--~~~~~~~~~~-~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~ 218 (226)
T PRK13222 145 -LPNKKPD--PAPLLLACEK-LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELL 218 (226)
T ss_pred -CCCCCcC--hHHHHHHHHH-cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHH
Confidence 0111222 2233333332 35566789999999999999999998 4444 321 23444567888886 888888
Q ss_pred HHHHH
Q psy10301 794 KAVMW 798 (1119)
Q Consensus 794 ~~i~~ 798 (1119)
..+.+
T Consensus 219 ~~l~~ 223 (226)
T PRK13222 219 PLLGL 223 (226)
T ss_pred HHHHH
Confidence 77654
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00035 Score=77.94 Aligned_cols=150 Identities=11% Similarity=0.235 Sum_probs=90.8
Q ss_pred CCCccHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--cCCCCceEE----------EecHh---H----HHHhh
Q psy10301 639 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCGI--VKPGEDYLI----------LEGKE---F----NRRVR 698 (1119)
Q Consensus 639 plr~~v~~aI~~l~~-aGI~v~m~TGD~~~ta~~ia~~~Gi--~~~~~~~i~----------l~g~~---~----~~~~~ 698 (1119)
.+-+++.++|++|++ .|+.++++||+....+..+.+.+++ +..++..+. ++... + .+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999998 8999999999999999988877663 111111111 11000 0 00000
Q ss_pred c---------------------CchhhhHHH---HhhhcCceEE-----EEecCh--hhHHHHHHHHHHhhcCCCCCEEE
Q psy10301 699 D---------------------NNGEVQQNL---LDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVA 747 (1119)
Q Consensus 699 ~---------------------~~~~~~~~~---~~~i~~~~~v-----~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~ 747 (1119)
. ...+...+. +.+......+ +....| .+|...++.+.++ +......++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~-~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE-APFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh-cCCCCCeEE
Confidence 0 000000011 1111111211 223333 4899999998775 345567889
Q ss_pred EEcCCcCCHHhhhcC----CceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 748 VTGDGTNDGPALKKA----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 748 ~iGDG~ND~~aLk~A----dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
++||+.||.+||+.+ +.||+|| ++. ..|++.|. +...+...+
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 999999999999999 9999999 553 44677777 455554443
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00019 Score=75.24 Aligned_cols=114 Identities=21% Similarity=0.178 Sum_probs=74.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+..--+. ++...... +..+. +.-...+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~~~~~~----~~~g~-----~~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYSNPASF----DNDGR-----HIVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--EeccCceE----CCCCc-----EEEecCCCC
Confidence 37899999999999999999999999999999999999998421111 11111000 00000 000000101
Q ss_pred EEEecCh--hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 718 VLARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 718 v~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
++ ...| ..|..+++.++.. . .+.+.++|||.||..|.+.||+-+|
T Consensus 140 ~~-~~~~~g~~K~~~~~~~~~~---~-~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 140 GC-CSCPCGCCKGKVIHKLSEP---K-YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred cc-CcCCCCCCHHHHHHHHHhh---c-CceEEEECCCcchhchHhcCCcccc
Confidence 11 1122 3588888887532 1 5779999999999999999998775
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00036 Score=75.54 Aligned_cols=131 Identities=19% Similarity=0.200 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEE----EecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI----LEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~----l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +.. ..++. .+|..+.. ..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~----------------~kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITI----------------TWP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEE----------------ecc
Confidence 68999999999999999999999999999999999988 632 22221 11111100 000
Q ss_pred ceEE--E-EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHH--hccCeeeccCCh
Q psy10301 715 RLRV--L-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK--EASDIILTDDNF 789 (1119)
Q Consensus 715 ~~~v--~-ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak--~aaDiil~d~~f 789 (1119)
.-.. + .++ ...|..+++.+ +.....+.++|||.||.+|.+.||+.++-+ .-.+.++ ..+.+.+. +|
T Consensus 135 ~p~~~~~~~~~-~~~K~~~l~~~-----~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~--~f 205 (219)
T PRK09552 135 HPCDEHCQNHC-GCCKPSLIRKL-----SDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFE--TF 205 (219)
T ss_pred CCccccccccC-CCchHHHHHHh-----ccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccC--CH
Confidence 0000 0 001 12477777764 445567899999999999999999977632 1112222 22334443 67
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+...++
T Consensus 206 ~ei~~~l~ 213 (219)
T PRK09552 206 HDVQTELK 213 (219)
T ss_pred HHHHHHHH
Confidence 77776653
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00071 Score=74.66 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=37.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
..-+.+.++|++|+++||.|+++||........+.+++|+.
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45667999999999999999999999999999999999984
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00048 Score=74.64 Aligned_cols=128 Identities=20% Similarity=0.302 Sum_probs=91.7
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
+..+-|+++++++.|+++|++..++|+++...+..+.+..|+...-+..+. +.+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~~~~---------------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GDDVP---------------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CCCCC----------------------
Confidence 456889999999999999999999999999999999999999532111111 11100
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC---ceEEEccC-ccHHHHhccCeeeccCChhHH
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGIT-GTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad---VGiamg~~-g~~~ak~aaDiil~d~~f~~i 792 (1119)
...-.|.....+.+.+ +...+.++|+||..+|..|=+.|+ ||+..|.+ +.......+|+++. ++..+
T Consensus 143 --~~KP~P~~l~~~~~~~-----~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el 213 (220)
T COG0546 143 --PPKPDPEPLLLLLEKL-----GLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAEL 213 (220)
T ss_pred --CCCcCHHHHHHHHHHh-----CCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHH
Confidence 0011344444444443 333458999999999999999998 77888753 45567777999998 77777
Q ss_pred HHHHH
Q psy10301 793 VKAVM 797 (1119)
Q Consensus 793 ~~~i~ 797 (1119)
...+.
T Consensus 214 ~~~l~ 218 (220)
T COG0546 214 LALLA 218 (220)
T ss_pred HHHHh
Confidence 66543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00029 Score=85.80 Aligned_cols=39 Identities=8% Similarity=0.175 Sum_probs=36.0
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 678 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi 678 (1119)
.-+.+.++|++++++|+.++++||+....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999996
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00044 Score=67.66 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=74.6
Q ss_pred eccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 635 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 635 gieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
.-..++++++.+.+++|++.|++++++||.....+....+.+|+......++..++...... .... ....
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~--------~~~~ 89 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--KEGL--------FLGG 89 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--cccc--------cccc
Confidence 45568999999999999999999999999999999999999998433232222221111000 0000 0001
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC-CceE
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA-DVGF 766 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A-dVGi 766 (1119)
....+.+-.|+.+..+.+.+ ....+.++++||+.+|..|.+.+ .-+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKLL-----GVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cccccCCCCHHHHHHHHHHc-----CCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 11122334444444444442 44567899999999999999984 4444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=70.39 Aligned_cols=125 Identities=21% Similarity=0.316 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-+.+ +.+.+ +
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i--~~~~~-------------------------~ 127 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHV--IGSDE-------------------------V 127 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeE--EecCc-------------------------C
Confidence 68899999999999999999999999999999999999984211111 00000 0
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE---Ecc-CccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA---MGI-TGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia---mg~-~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....| +..++..+.+. ++...+.++++||+.+|..+-++|++... .|. +..+..+..+|+++. ++..+..
T Consensus 128 -~~~KP--~~~~~~~~~~~-~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~ 201 (205)
T TIGR01454 128 -PRPKP--APDIVREALRL-LDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLA 201 (205)
T ss_pred -CCCCC--ChHHHHHHHHH-cCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHH
Confidence 01122 22333333322 35556789999999999999999997643 331 222345678999886 6777665
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
++
T Consensus 202 ~~ 203 (205)
T TIGR01454 202 LC 203 (205)
T ss_pred Hh
Confidence 44
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0008 Score=71.85 Aligned_cols=129 Identities=19% Similarity=0.392 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC--CcCCCCceEEEecH--------hHHHHh---hc------
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG--IVKPGEDYLILEGK--------EFNRRV---RD------ 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~G--i~~~~~~~i~l~g~--------~~~~~~---~~------ 699 (1119)
++.+++.+++++|++.|++++++||+....+..+.+.++ ++..++..+...+. .....+ ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999988744 22222222221111 000000 00
Q ss_pred -Cc--------------------hh-hh----H---HHHhhhc---CceEEEE------ecCh--hhHHHHHHHHHHhhc
Q psy10301 700 -NN--------------------GE-VQ----Q---NLLDKVW---PRLRVLA------RSSP--SDKYTLVKGMIDSKI 739 (1119)
Q Consensus 700 -~~--------------------~~-~~----~---~~~~~i~---~~~~v~a------r~sP--~~K~~iV~~l~~~~~ 739 (1119)
.. .. .. . +.+.... ..+.+.. ...| .+|...++.+.++ +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~-~ 175 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE-L 175 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH-h
Confidence 00 00 00 0 0111111 2233321 2234 5899999998765 3
Q ss_pred CCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 740 SAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 740 ~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
....+.++++||+.||.+|++.+++|+||
T Consensus 176 ~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 176 NGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 44556799999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0015 Score=73.12 Aligned_cols=124 Identities=16% Similarity=0.224 Sum_probs=82.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++.|++.++++.|++.|+++.++|+.+...+..+....|+-..-+. +
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--i------------------------------ 147 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--I------------------------------ 147 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE--E------------------------------
Confidence 46899999999999999999999999999999988888888311110 1
Q ss_pred EEEecChhh--HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEE--ccCc-cHHHHhccCeeeccCChhH
Q psy10301 718 VLARSSPSD--KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAM--GITG-TDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 718 v~ar~sP~~--K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iam--g~~g-~~~ak~aaDiil~d~~f~~ 791 (1119)
+.+...+.. +..+++.+.+. ++...+.++++||+.||+.+-+.|++. +++ |... .+.....+|+++. ++..
T Consensus 148 ~~~d~~~~~Kp~p~~~~~~~~~-~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~e 224 (272)
T PRK13223 148 IGGDTLPQKKPDPAALLFVMKM-AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRA 224 (272)
T ss_pred EecCCCCCCCCCcHHHHHHHHH-hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHH
Confidence 111111111 22334333332 244567889999999999999999973 333 3111 2234457898886 6777
Q ss_pred HHHHH
Q psy10301 792 IVKAV 796 (1119)
Q Consensus 792 i~~~i 796 (1119)
+..++
T Consensus 225 l~~~~ 229 (272)
T PRK13223 225 LLPGC 229 (272)
T ss_pred HHHHH
Confidence 76543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0045 Score=68.30 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcC-CceEEEccCccHHHHhccCeee
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKA-DVGFAMGITGTDVAKEASDIIL 784 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~A-dVGiamg~~g~~~ak~aaDiil 784 (1119)
-+|..-++.+.++ .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.+++
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 3799999988653 478899999 99999999976 5778777 88888887765543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0035 Score=67.24 Aligned_cols=123 Identities=17% Similarity=0.232 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.+...+..+.+..|+...-+. +..+.+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~-------------------------- 136 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV--LIGGDS-------------------------- 136 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE--EEecCC--------------------------
Confidence 5899999999999999999999999999999999999998421111 111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE---ccCcc-HHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM---GITGT-DVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam---g~~g~-~~ak~aaDiil~d~~f~~i~~ 794 (1119)
..+..|. ..++..+.+. ++...+.++++||+.+|..|.++|++-... |-... +.....+|+++. ++..+..
T Consensus 137 ~~~~Kp~--p~~~~~~~~~-~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 137 LAQRKPH--PDPLLLAAER-LGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred CCCCCCC--hHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 0011222 2233333222 345556799999999999999999976542 21111 233356888876 5666543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0069 Score=67.05 Aligned_cols=143 Identities=14% Similarity=0.187 Sum_probs=86.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..+...++ -+--++. .++...- +. -+-
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~Iv-SN~L~f~-----~dGvltG--~~--~P~-- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVV-SNFMDFD-----EDGVLKG--FK--GPL-- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEE-eeeEEEC-----CCCeEeC--CC--CCc--
Confidence 3689999999999999999999999999999999999999864433221 1110110 0000000 00 000
Q ss_pred EEEecChhhHHHHHHHHHHhhcC--CCCCEEEEEcCCcCCHHhhhcC---CceEEEcc-Cc-----cHHHHhccCeeecc
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKKA---DVGFAMGI-TG-----TDVAKEASDIILTD 786 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~--~~~~~V~~iGDG~ND~~aLk~A---dVGiamg~-~g-----~~~ak~aaDiil~d 786 (1119)
.....|.+.+.......++ .....|.++|||.||++|..-. .--+.+|- +. -+.-+++-|||+.+
T Consensus 188 ----i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~ 263 (277)
T TIGR01544 188 ----IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQ 263 (277)
T ss_pred ----ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEEC
Confidence 0113566555432111123 4556788999999999995433 22233331 11 12356789999998
Q ss_pred CChhHHHHHH
Q psy10301 787 DNFSSIVKAV 796 (1119)
Q Consensus 787 ~~f~~i~~~i 796 (1119)
|.=-.++.+|
T Consensus 264 D~t~~v~~~i 273 (277)
T TIGR01544 264 DETLEVANSI 273 (277)
T ss_pred CCCchHHHHH
Confidence 8766666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0038 Score=67.21 Aligned_cols=125 Identities=20% Similarity=0.230 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+..--+. ++.+.+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~~~~-------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VITLDD-------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEecCc--------------------------
Confidence 3789999999999999999999999999999999999998421111 111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce---EEEccCccH-HHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTD-VAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG---iamg~~g~~-~ak~aaDiil~d~~f~~i~~ 794 (1119)
..+..|. ..+++.+.+. ++...+.++++||+.+|..|-++|++- +.-|....+ .....+|+++. ++..+..
T Consensus 134 ~~~~Kp~--p~~~~~~~~~-~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~ 208 (214)
T PRK13288 134 VEHAKPD--PEPVLKALEL-LGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLA 208 (214)
T ss_pred CCCCCCC--cHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHH
Confidence 0111221 2223333222 344557789999999999999999984 333421222 33456888877 7777776
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
.+
T Consensus 209 ~i 210 (214)
T PRK13288 209 IV 210 (214)
T ss_pred HH
Confidence 54
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0029 Score=68.53 Aligned_cols=124 Identities=15% Similarity=0.199 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-++.|++.++++.|++.|+++.++|+........+.+..||..--+. ++.+.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 144 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LASAEKL------------------------ 144 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EEEcccC------------------------
Confidence 35789999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCcc---HHHHhccCeeeccCChhHHHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~---~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....|. ..+.+.+.+. ++...+.++++||+.||+.+-+.|++....-..+. +.-...+|+++. +|..+..
T Consensus 145 --~~~Kp~--~~~~~~~~~~-~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~~ 217 (222)
T PRK10826 145 --PYSKPH--PEVYLNCAAK-LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELTA 217 (222)
T ss_pred --CCCCCC--HHHHHHHHHH-cCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHhh
Confidence 011122 2233433332 34455678999999999999999998754321221 122335778776 6766643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0067 Score=77.54 Aligned_cols=148 Identities=16% Similarity=0.256 Sum_probs=88.8
Q ss_pred CCCccHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--cCCCCceEEEecHh--------------HHHHhhc--
Q psy10301 639 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCGI--VKPGEDYLILEGKE--------------FNRRVRD-- 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~-aGI~v~m~TGD~~~ta~~ia~~~Gi--~~~~~~~i~l~g~~--------------~~~~~~~-- 699 (1119)
.+.+++.+++++|.+ .|+.|+++||+............++ +..++..+...|.+ ....+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 366889999999999 6999999999999998887665542 22222211111110 0000000
Q ss_pred ---------------------Cchhhh-------HHHHhhhcC--ceEEE-----EecCh--hhHHHHHHHHHHhhcCCC
Q psy10301 700 ---------------------NNGEVQ-------QNLLDKVWP--RLRVL-----ARSSP--SDKYTLVKGMIDSKISAG 742 (1119)
Q Consensus 700 ---------------------~~~~~~-------~~~~~~i~~--~~~v~-----ar~sP--~~K~~iV~~l~~~~~~~~ 742 (1119)
...+.. .+.+..+.. .+.+. ....| -+|...++.+.+ ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~---~~~ 670 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE---AGP 670 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh---cCC
Confidence 000000 011111111 11211 12223 489999999876 234
Q ss_pred CCEEEEEcCCcCCHHhhhcC---CceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 743 REVVAVTGDGTNDGPALKKA---DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 743 ~~~V~~iGDG~ND~~aLk~A---dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
...++++||+.||.+||+.+ ..+++|| ++ +.+|++.+.+. ..+...+
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHH
Confidence 56899999999999999986 6888888 43 56788988843 4455444
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0058 Score=66.62 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=82.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+...- +. ++.+.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-~~-i~~~~~~------------------------- 147 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-AV-LIGGDTL------------------------- 147 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-cE-EEecCcC-------------------------
Confidence 57899999999999999999999999998888888888884211 11 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE---EccCcc--HHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA---MGITGT--DVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia---mg~~g~--~~ak~aaDiil~d~~f~~i~ 793 (1119)
.+..|. -.+...+.+. ++...+.++++||+.||..|-+.|++... -|.... ......+|+++. ++..+.
T Consensus 148 -~~~KP~--p~~~~~~~~~-l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~ 221 (229)
T PRK13226 148 -AERKPH--PLPLLVAAER-IGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLW 221 (229)
T ss_pred -CCCCCC--HHHHHHHHHH-hCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHH
Confidence 011222 1222222222 35566789999999999999999987642 332111 123356899887 777776
Q ss_pred HHHHH
Q psy10301 794 KAVMW 798 (1119)
Q Consensus 794 ~~i~~ 798 (1119)
..+-|
T Consensus 222 ~~~~~ 226 (229)
T PRK13226 222 NPATW 226 (229)
T ss_pred HHhcC
Confidence 65544
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.011 Score=60.51 Aligned_cols=110 Identities=20% Similarity=0.217 Sum_probs=73.8
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCcCCCCceEEEecHhHHHHhhcCchhhhHHHHh
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR---SIATKC---GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLD 710 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~---~ia~~~---Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~ 710 (1119)
+|.+.|++.+++++++++|++++++||+....+. ....++ |.--+...++.-+|..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~------------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALH------------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhh-------------
Confidence 5788999999999999999999999999998874 555552 321122344444444332110
Q ss_pred hhcCceEEEEecChh-hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 711 KVWPRLRVLARSSPS-DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 711 ~i~~~~~v~ar~sP~-~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
+ .+. ...|+ .|...++.+.+..-+.....++.+||+.+|+.+.++++|-
T Consensus 92 ----~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 ----R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 112 22344 3888888876542223557888899999999999988764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.011 Score=66.32 Aligned_cols=122 Identities=14% Similarity=0.212 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+...-+ . +..+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~-~-vi~~---------------------------- 191 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS-V-VQAG---------------------------- 191 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-E-EEec----------------------------
Confidence 578999999999999999999999999999999999999842111 0 1111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE---EccCccH-HHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA---MGITGTD-VAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia---mg~~g~~-~ak~aaDiil~d~~f~~i~~ 794 (1119)
...+ .|......+.++ ++...+.++++||+.+|+.+-++|++-.. -|....+ .....+|+++. ++..+..
T Consensus 192 --~~~~-~k~~~~~~~l~~-~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~ 265 (273)
T PRK13225 192 --TPIL-SKRRALSQLVAR-EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQ 265 (273)
T ss_pred --CCCC-CCHHHHHHHHHH-hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHH
Confidence 1101 122333333332 24455679999999999999999997543 2311111 23446899886 7877776
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
.+
T Consensus 266 ~~ 267 (273)
T PRK13225 266 AV 267 (273)
T ss_pred HH
Confidence 54
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.013 Score=63.01 Aligned_cols=107 Identities=16% Similarity=0.233 Sum_probs=75.8
Q ss_pred CCCccHHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIK-KCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~-~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+... .++++. ++.. ...+.+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t---~le~---~~gg~~------------- 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIAS---QIER---GNGGWV------------- 153 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEE---EeEE---eCCceE-------------
Confidence 47999999996 78889999999999999999999999766432 233321 1110 000100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEc
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg 769 (1119)
.-..|.-+.|..-++... ........+-||+.||.|||+.||-+++++
T Consensus 154 ~g~~c~g~~Kv~rl~~~~----~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 LPLRCLGHEKVAQLEQKI----GSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred cCccCCChHHHHHHHHHh----CCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 112356788988777653 334445667899999999999999999986
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=62.93 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=76.5
Q ss_pred CCCccHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI-~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++|++.+.| +.+++.|++++++|+-...-+..+++.+|+.. .+.+++.+ +... ..+ +
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~---l~~~---~tg--------------~ 153 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ---MQRR---YGG--------------W 153 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE---EEEE---Ecc--------------E
Confidence 4589999999 57888999999999999999999999999632 23333222 1100 000 1
Q ss_pred EE-EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEc
Q psy10301 718 VL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 769 (1119)
Q Consensus 718 v~-ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg 769 (1119)
+. ..|.-+.|..-++... ........+-||+.||.|||+.|+-+++++
T Consensus 154 ~~g~~c~g~~K~~~l~~~~----~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 154 VLTLRCLGHEKVAQLERKI----GTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ECCccCCChHHHHHHHHHh----CCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 11 2356788988887653 334455667799999999999999999986
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.014 Score=64.46 Aligned_cols=71 Identities=20% Similarity=0.269 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHH-----HHhc---cCeee-ccCChhHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV-----AKEA---SDIIL-TDDNFSSIVKA 795 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~-----ak~a---aDiil-~d~~f~~i~~~ 795 (1119)
..|...|+.+++. ++...+.|+++||+.||.+||..++-||.+| |+.+. .... ..+.. ....-.+|.++
T Consensus 164 a~K~~Al~~L~~~-~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIleg 241 (247)
T PF05116_consen 164 ASKGAALRYLMER-WGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEG 241 (247)
T ss_dssp -SHHHHHHHHHHH-HT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHH
Confidence 4799999999876 4555566777899999999999999999999 66666 2222 22333 33445566666
Q ss_pred HH
Q psy10301 796 VM 797 (1119)
Q Consensus 796 i~ 797 (1119)
+.
T Consensus 242 l~ 243 (247)
T PF05116_consen 242 LQ 243 (247)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.018 Score=62.07 Aligned_cols=126 Identities=23% Similarity=0.326 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcC-CCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~-~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+.. ..-+. ++.+.+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~-i~~~~~~----------------------- 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA-VVCPSDV----------------------- 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE-EEcCCcC-----------------------
Confidence 3799999999999999999999999999999999999999841 11111 1111110
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCC-CCEEEEEcCCcCCHHhhhcCCceEEEc-cCccH----HHHhccCeeeccCChh
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADVGFAMG-ITGTD----VAKEASDIILTDDNFS 790 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~-~~~V~~iGDG~ND~~aLk~AdVGiamg-~~g~~----~ak~aaDiil~d~~f~ 790 (1119)
.+..|. ..+.....++ ++.. .+.++++||+.+|+.+-+.|++..+++ ..|.. .....+|+++. ++.
T Consensus 142 ---~~~KP~--p~~~~~a~~~-~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~ 213 (220)
T TIGR03351 142 ---AAGRPA--PDLILRAMEL-TGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVA 213 (220)
T ss_pred ---CCCCCC--HHHHHHHHHH-cCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHH
Confidence 011232 2223222222 2433 468999999999999999999987322 12221 12345777776 666
Q ss_pred HHHHH
Q psy10301 791 SIVKA 795 (1119)
Q Consensus 791 ~i~~~ 795 (1119)
.+..+
T Consensus 214 ~l~~~ 218 (220)
T TIGR03351 214 DLPAL 218 (220)
T ss_pred HHHHh
Confidence 66543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.042 Score=57.31 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=92.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCc--eEEEec----HhHH-HH---hh---cCchhhh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEG----KEFN-RR---VR---DNNGEVQ 705 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~--~i~l~g----~~~~-~~---~~---~~~~~~~ 705 (1119)
.+-|++.++++.+++. ...+++|---..-+..+|..+|+-...-. -+.++. .+.+ ++ +. +..++-.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4678999999998876 45556666667778899999998321100 011110 0000 10 00 0111111
Q ss_pred HHHHhhhcCceEEEEecChh---------------hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC-c-eEEE
Q psy10301 706 QNLLDKVWPRLRVLARSSPS---------------DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD-V-GFAM 768 (1119)
Q Consensus 706 ~~~~~~i~~~~~v~ar~sP~---------------~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad-V-Giam 768 (1119)
.+.+++ +|.|..|. .|.++++.+.+. .......+++||++.|+.||+.+. - |+|+
T Consensus 162 fe~lDe------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~el--e~~d~sa~~VGDSItDv~ml~~~rgrGglAv 233 (315)
T COG4030 162 FEKLDE------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCEL--EGIDFSAVVVGDSITDVKMLEAARGRGGLAV 233 (315)
T ss_pred HHHHHH------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhh--cCCCcceeEecCcccchHHHHHhhccCceEE
Confidence 122222 23444443 567777776553 344455789999999999999884 3 3666
Q ss_pred ccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 769 GITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 769 g~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.-||.+-|..-||+.+...+..+....|.
T Consensus 234 aFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 234 AFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred EecCCcccccccceEEeccchhhhhHHHH
Confidence 67899999999999999888888777765
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.033 Score=62.25 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++-|++.+.++.|++.|+++.++||.....+..+-+..|+..-..+. ++.+.+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~-i~~~~~~------------------------- 154 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDH-VVTTDDV------------------------- 154 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceE-EEcCCcC-------------------------
Confidence 56799999999999999999999999999888888888764321111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCC-CCEEEEEcCCcCCHHhhhcCCc---eEEEccCc----------------------
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV---GFAMGITG---------------------- 772 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~-~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g---------------------- 772 (1119)
....|. ..-+.+.+.+ ++.. .+.++|+||+.+|+.+=+.|++ |+.-|...
T Consensus 155 -~~~KP~-p~~~~~a~~~--l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T PRK13478 155 -PAGRPY-PWMALKNAIE--LGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRER 230 (267)
T ss_pred -CCCCCC-hHHHHHHHHH--cCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHH
Confidence 011232 1122233322 2432 4679999999999999999996 44444210
Q ss_pred --cHHHHhccCeeeccCChhHHHHHH
Q psy10301 773 --TDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 773 --~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
.+....-+|+++. ++..+...+
T Consensus 231 ~~~~l~~~~a~~vi~--~~~~l~~~l 254 (267)
T PRK13478 231 ARARLRAAGAHYVID--TIADLPAVI 254 (267)
T ss_pred HHHHHHHcCCCeehh--hHHHHHHHH
Confidence 1122345788886 677776655
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.037 Score=64.18 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=50.1
Q ss_pred ecCh---hhHHHHHHHHHHhhcCCCCC---EEEEEcCCcCCHHhhhc-----CCceEEEccCccHHHHhccCeeeccCCh
Q psy10301 721 RSSP---SDKYTLVKGMIDSKISAGRE---VVAVTGDGTNDGPALKK-----ADVGFAMGITGTDVAKEASDIILTDDNF 789 (1119)
Q Consensus 721 r~sP---~~K~~iV~~l~~~~~~~~~~---~V~~iGDG~ND~~aLk~-----AdVGiamg~~g~~~ak~aaDiil~d~~f 789 (1119)
...| -+|...|+.+.++ +...+. .++++||+.||-.||+. +++||+|| ++... ..|++.|. +-
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~-~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp 366 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLES-LGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DP 366 (384)
T ss_pred EEecCCCCCHHHHHHHHHHh-cCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CH
Confidence 4455 3999999999765 232222 35899999999999996 68999999 55432 25778887 55
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+...+.
T Consensus 367 ~eV~~~L~ 374 (384)
T PLN02580 367 SEVMEFLK 374 (384)
T ss_pred HHHHHHHH
Confidence 56555543
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.058 Score=59.95 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=78.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+...-+. ++.+.+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d~------------------------- 161 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAEDV------------------------- 161 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEecccC-------------------------
Confidence 5689999999999999999999999999999999999998432111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc--cHHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG--TDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g--~~~ak~aaDiil~d~~f~~i~ 793 (1119)
.+..|. ..+.....+. ++...+.++|+||..+|+.|=+.|++-.. +..| .......+|+++. +++.+.
T Consensus 162 -~~~KP~--Pe~~~~a~~~-l~~~p~~~l~IgDs~~Di~aA~~aG~~~i-~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 162 -YRGKPD--PEMFMYAAER-LGFIPERCIVFGNSNSSVEAAHDGCMKCV-AVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred -CCCCCC--HHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHcCCEEE-EEecCCchhhhccCCEEeC--CHHHHH
Confidence 011222 1222222222 35556779999999999999999998442 2222 2222335687776 566554
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.016 Score=61.57 Aligned_cols=94 Identities=19% Similarity=0.139 Sum_probs=63.6
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..--+.++ .+.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~--~~~~------------------------ 157 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQI--WMED------------------------ 157 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEE--eecC------------------------
Confidence 45577788999999999999999999999999999999999842111111 1100
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A 762 (1119)
+..+-.|+--..+.+. ++...+.++++||+.+|+.+-++|
T Consensus 158 -~~~KP~p~~~~~~~~~-----~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 -CPPKPNPEPLILAAKA-----LGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CCCCcCHHHHHHHHHH-----hCcCcccEEEEeCCHHHHHHHHhC
Confidence 0112223332333333 245566899999999999876654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.07 Score=57.62 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=72.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+. ..+ .++.+.+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~-~~~--~i~~~~~~~------------------------ 135 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP-APE--VFVTAERVK------------------------ 135 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC-Ccc--EEEEHHHhc------------------------
Confidence 57899999999999999999999998877777766777772 111 122222211
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCcc-HHHHhccCeeec
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT-DVAKEASDIILT 785 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g~-~~ak~aaDiil~ 785 (1119)
+..|.-. -+...+.+ ++...+.++++||..+|+.+=+.|++- +++. .+. ......+|+++.
T Consensus 136 --~~KP~p~-~~~~~~~~--~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 --RGKPEPD-AYLLGAQL--LGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred --CCCCCcH-HHHHHHHH--cCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 1123211 11122211 245567899999999999999999984 4443 222 223345777766
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.05 Score=53.61 Aligned_cols=93 Identities=24% Similarity=0.304 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN--------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLD 710 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~--------~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~ 710 (1119)
++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+. .......+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP---IDVLYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC---EEEEEECC--------------------
Confidence 578999999999999999999999998 77788888888873 11111111
Q ss_pred hhcCceEEEEecChhhHHHHHHHHHHhhcC-CCCCEEEEEcC-CcCCHHhhhcCCceE
Q psy10301 711 KVWPRLRVLARSSPSDKYTLVKGMIDSKIS-AGREVVAVTGD-GTNDGPALKKADVGF 766 (1119)
Q Consensus 711 ~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~-~~~~~V~~iGD-G~ND~~aLk~AdVGi 766 (1119)
....| |..+.+.+.+. ++ ...+.++|+|| ..+|+.+-+.|++-.
T Consensus 82 ---------~~~KP--~~~~~~~~~~~-~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 ---------HCRKP--KPGMFLEALKR-FNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred ---------CCCCC--ChHHHHHHHHH-cCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00122 33444444433 32 45678999999 589999999987643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.055 Score=65.45 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+...-+.+ +.+.+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i--~~~d~v------------------------- 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTET--FSIEQI------------------------- 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhccee--EecCCC-------------------------
Confidence 68899999999999999999999999999999999999984211111 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE-EEcc-CccHHHHhccCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGI-TGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi-amg~-~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
-....|+ ++....+. ++ .+.++++||+.+|+.+-+.|++-. ++.. .+.+.....+|+++. ++..+...+
T Consensus 383 ~~~~kP~----~~~~al~~-l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 383 NSLNKSD----LVKSILNK-YD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred CCCCCcH----HHHHHHHh-cC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 0011232 33333322 22 357999999999999999999743 2321 122222345788887 777777665
Q ss_pred H
Q psy10301 797 M 797 (1119)
Q Consensus 797 ~ 797 (1119)
.
T Consensus 454 ~ 454 (459)
T PRK06698 454 S 454 (459)
T ss_pred H
Confidence 4
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.06 Score=59.43 Aligned_cols=120 Identities=11% Similarity=0.098 Sum_probs=77.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+-....+..+-+..|+...-+. ++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~~------------------------ 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSECE------------------------ 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcCC------------------------
Confidence 5789999999999999999999999999999999999998432111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE---EccCccHHHHhccCeeeccCChhH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA---MGITGTDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia---mg~~g~~~ak~aaDiil~d~~f~~ 791 (1119)
+..|.- .+.....+. ++...+.++++||+.+|+.+=++|++-.. -|....+.....+|+++. ++..
T Consensus 162 --~~KP~p--~~~~~a~~~-~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~--~~~e 230 (248)
T PLN02770 162 --HAKPHP--DPYLKALEV-LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK--DYED 230 (248)
T ss_pred --CCCCCh--HHHHHHHHH-hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec--cchh
Confidence 111221 122222221 34556778999999999999999997543 221111223346888887 4444
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.065 Score=59.27 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+..--.+. ++.+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~-ii~~~~~------------------------- 152 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDY-NVTTDDV------------------------- 152 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCce-EEccccC-------------------------
Confidence 46799999999999999999999999999999999999985321111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~-~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
.+..|. ...+.+.+.+ ++. ..+.++++||..+|+.+=+.|++-
T Consensus 153 -~~~KP~-p~~~~~a~~~--l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 153 -PAGRPA-PWMALKNAIE--LGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -CCCCCC-HHHHHHHHHH--cCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 011232 1222333322 243 256799999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.04 Score=60.04 Aligned_cols=89 Identities=19% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN----INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~----~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
.+.|++.+.++.+++.|+++.++||+. ..|+..+.+..|+-......+++.|.+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 467889999999999999999999974 668999999899821111111111110
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
....+|...++. . ..++++||..+|..+-+.|++-
T Consensus 172 -------~~K~~K~~~l~~--------~-~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 -------PGQYTKTQWLKK--------K-NIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------CCCCCHHHHHHh--------c-CCeEEEcCCHHHHHHHHHcCCc
Confidence 011345443331 1 2488999999999999999865
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=56.10 Aligned_cols=97 Identities=14% Similarity=0.189 Sum_probs=65.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+-+...+....+.+|+...-+.+ +.+.+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i--~~~~~-------------------------- 145 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAV--ITSEE-------------------------- 145 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEE--EEecc--------------------------
Confidence 57899999999999999999999999988888888899883211111 11111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGi 766 (1119)
..+..|... +.....+. ++...+.++++||.. +|+.+-++|++-.
T Consensus 146 ~~~~KP~~~--~~~~~~~~-~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 146 EGVEKPHPK--IFYAALKR-LGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred CCCCCCCHH--HHHHHHHH-cCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 011223221 22222222 345567799999998 9999999998743
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.1 Score=58.96 Aligned_cols=123 Identities=14% Similarity=0.209 Sum_probs=74.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-...+.++.+.+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------------------------- 198 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV------------------------- 198 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc-------------------------
Confidence 5789999999999999999999999988888777665532211111111122111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccH--HHHhccCeeeccCChhHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD--VAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~--~ak~aaDiil~d~~f~~i 792 (1119)
.+..|+- .+...+.+. ++...+.++++||+.+|+.|-+.|++.+..-..|.. .....+|+++. ++..+
T Consensus 199 -~~~KP~p--~~~~~a~~~-~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l 268 (286)
T PLN02779 199 -PKKKPDP--DIYNLAAET-LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDV 268 (286)
T ss_pred -CCCCCCH--HHHHHHHHH-hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhc
Confidence 1112221 122222111 244567799999999999999999977654323321 11235788876 44444
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.055 Score=54.92 Aligned_cols=101 Identities=21% Similarity=0.245 Sum_probs=71.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC----CcC----CCCceEEEecHhHHHHhhcCchhhhHHHHh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG----IVK----PGEDYLILEGKEFNRRVRDNNGEVQQNLLD 710 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~G----i~~----~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~ 710 (1119)
.++|+-++.++.+++.+++++++|+-...-...+-...+ |.. .++..+..+|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg-------------------- 132 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDG-------------------- 132 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCC--------------------
Confidence 479999999999999999999999888777777776665 210 0111111111
Q ss_pred hhcCceEEEEecCh--hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 711 KVWPRLRVLARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 711 ~i~~~~~v~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
+...++...+| .+|...|+.+ .++.+.+.++|||+.|..|-+.+|+=+|
T Consensus 133 ---~h~i~~~~ds~fG~dK~~vI~~l-----~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 133 ---QHSIKYTDDSQFGHDKSSVIHEL-----SEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ---ceeeecCCccccCCCcchhHHHh-----hcCCceEEEecCCcccccHhhhhhhHhh
Confidence 11112222222 4789999986 5567889999999999999999999886
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.17 Score=54.93 Aligned_cols=99 Identities=9% Similarity=0.075 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+-+...+...-+..|+..--+. ++ .+.+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~-iv-~s~~-------------------------- 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDL-LL-STHT-------------------------- 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCE-EE-Eeee--------------------------
Confidence 5789999999999999999999999988888888888887421111 11 1100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
+.+..|+ ..+.....+. ++...+.++++||..+|+.+=+.|++..++
T Consensus 145 ~~~~KP~--p~~~~~~~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~~~ 191 (224)
T PRK14988 145 FGYPKED--QRLWQAVAEH-TGLKAERTLFIDDSEPILDAAAQFGIRYCL 191 (224)
T ss_pred CCCCCCC--HHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCeEEE
Confidence 0111232 2233333222 355567799999999999999999996433
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.26 Score=53.29 Aligned_cols=120 Identities=13% Similarity=0.185 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+ +|+++.++|......+...-+..|+...-+. .+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--------------------------------v~ 141 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDL--------------------------------LV 141 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCE--------------------------------EE
Confidence 47899999999999 6899999999988888888888888321111 11
Q ss_pred EEe----cChhhHHHHHHHHHHhhcCC-CCCEEEEEcCCc-CCHHhhhcCCceEE-EccCccH-HHHhccCeeeccCChh
Q psy10301 719 LAR----SSPSDKYTLVKGMIDSKISA-GREVVAVTGDGT-NDGPALKKADVGFA-MGITGTD-VAKEASDIILTDDNFS 790 (1119)
Q Consensus 719 ~ar----~sP~~K~~iV~~l~~~~~~~-~~~~V~~iGDG~-ND~~aLk~AdVGia-mg~~g~~-~ak~aaDiil~d~~f~ 790 (1119)
.+. ..|. ..+...+.+. ++. ..+.++++||+. +|+.+=+.|++-.. +...+.. .....+|+++. ++.
T Consensus 142 ~~~~~~~~KP~--p~~~~~~~~~-~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~ 216 (224)
T PRK09449 142 ISEQVGVAKPD--VAIFDYALEQ-MGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLS 216 (224)
T ss_pred EECccCCCCCC--HHHHHHHHHH-cCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHH
Confidence 111 1232 2333333332 232 346799999998 79999999998533 3211211 11124677776 677
Q ss_pred HHHHHH
Q psy10301 791 SIVKAV 796 (1119)
Q Consensus 791 ~i~~~i 796 (1119)
.+...+
T Consensus 217 el~~~l 222 (224)
T PRK09449 217 ELEQLL 222 (224)
T ss_pred HHHHHH
Confidence 776554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.095 Score=55.54 Aligned_cols=97 Identities=14% Similarity=0.276 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+...-+. ++.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~~s~~~------------------------- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDA--VLSADAV------------------------- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhe--eEehhhc-------------------------
Confidence 5789999999999999999999999999989999999998321111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
....|. ..+.+...+. ++...+.++++||+.+|+.+-+.|++-.
T Consensus 145 -~~~KP~--~~~~~~~~~~-~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 145 -RAYKPA--PQVYQLALEA-LGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred -CCCCCC--HHHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 111232 2222222222 2445577899999999999999988753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.16 Score=59.08 Aligned_cols=120 Identities=14% Similarity=0.142 Sum_probs=78.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||..--+. ++.+.+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~sddv------------------------- 268 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVAAEDV------------------------- 268 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEecCcC-------------------------
Confidence 4789999999999999999999999999999999999998421111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc-cHHH-HhccCeeeccCChhHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVA-KEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g-~~~a-k~aaDiil~d~~f~~i 792 (1119)
.+..|+ -.+.....+. ++...+.++|+||..+|+.|-+.|++-.. +..+ .+.. ...+|+++. ++..+
T Consensus 269 -~~~KP~--Peifl~A~~~-lgl~Peecl~IGDS~~DIeAAk~AGm~~I-gV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 269 -YRGKPD--PEMFIYAAQL-LNFIPERCIVFGNSNQTVEAAHDARMKCV-AVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred -CCCCCC--HHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCEEE-EECCCCChhHhcCCCEEEC--CHHHH
Confidence 011232 2222222222 35567789999999999999999997543 3222 2222 235788876 66665
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.13 Score=53.78 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=24.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN 665 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~ 665 (1119)
.+.||+.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 367999999999999999999999876
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.33 Score=49.02 Aligned_cols=86 Identities=19% Similarity=0.291 Sum_probs=62.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
..-|++.+=++.++++|+++.++|.-+...+...+..+|+- ++.--
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~-----fi~~A----------------------------- 91 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-----FIYRA----------------------------- 91 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc-----eeecc-----------------------------
Confidence 46788999999999999999999999999999999999982 11111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADV 764 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdV 764 (1119)
..|-- ..+-+++++. +...+.|+|+||.. .|+-+=..|++
T Consensus 92 ---~KP~~-~~fr~Al~~m--~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 92 ---KKPFG-RAFRRALKEM--NLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ---cCccH-HHHHHHHHHc--CCChhHEEEEcchhhhhhhcccccCc
Confidence 12332 2345555554 56778899999985 57766555543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.064 Score=58.50 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=35.6
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCc
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGD----NINTARSIATKCGIV 679 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD----~~~ta~~ia~~~Gi~ 679 (1119)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4445999999999999999999998 777999999999993
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.076 Score=60.35 Aligned_cols=107 Identities=19% Similarity=0.106 Sum_probs=73.3
Q ss_pred ccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcC-CCCceEEEecHhH-HHHhhcCchhhhHHHHhhhc
Q psy10301 636 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-PGEDYLILEGKEF-NRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 636 ieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~-~~~~~i~l~g~~~-~~~~~~~~~~~~~~~~~~i~ 713 (1119)
..+++.|++.++++.|++.|++++++||.....+..+.+.+|+.. .-+. +.|.+. ...+++ ..
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~---i~~~~~~~~~~~~------------~~ 248 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD---LIGRPPDMHFQRE------------QG 248 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh---hhCCcchhhhccc------------CC
Confidence 567899999999999999999999999999999999999999842 1111 111110 000000 00
Q ss_pred CceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 714 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 714 ~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
--+-.|+-+...++.+ .....+.++|+||..+|+.+-+.|++-.
T Consensus 249 -----~~kp~p~~~~~~l~~~----~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 249 -----DKRPDDVVKEEIFWEK----IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred -----CCCCcHHHHHHHHHHH----hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0133455566555543 1223478999999999999999999875
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.2 Score=51.99 Aligned_cols=122 Identities=21% Similarity=0.143 Sum_probs=68.3
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCcCCCCceEEEe--cHhHHHHhhcCchhhhHHHH
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNIN--------TARSIATKCGIVKPGEDYLILE--GKEFNRRVRDNNGEVQQNLL 709 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~--------ta~~ia~~~Gi~~~~~~~i~l~--g~~~~~~~~~~~~~~~~~~~ 709 (1119)
+.|++.++++.|++.|+++.++|+.... ......+..|+. ..+.... +.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD---DIYLCPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC---EEEECcCCCCCCC----------------
Confidence 6899999999999999999999987641 122333445542 1000000 0000
Q ss_pred hhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc--cH--------HHHhc
Q psy10301 710 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG--TD--------VAKEA 779 (1119)
Q Consensus 710 ~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g--~~--------~ak~a 779 (1119)
....|. -.+.....++ ++...+.++|+||..+|+.+=++|++-...-..| .+ ..+..
T Consensus 90 ----------~~~KP~--p~~~~~~~~~-l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~ 156 (173)
T PRK06769 90 ----------ECRKPS--TGMLLQAAEK-HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIE 156 (173)
T ss_pred ----------CCCCCC--HHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCC
Confidence 011222 1222222222 2445567999999999999999998755432122 22 11234
Q ss_pred cCeeeccCChhHHHHH
Q psy10301 780 SDIILTDDNFSSIVKA 795 (1119)
Q Consensus 780 aDiil~d~~f~~i~~~ 795 (1119)
+|+++. ++..+...
T Consensus 157 ~~~~~~--~~~el~~~ 170 (173)
T PRK06769 157 PNYIAE--NFEDAVNW 170 (173)
T ss_pred Ccchhh--CHHHHHHH
Confidence 666665 56666554
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.16 Score=54.67 Aligned_cols=122 Identities=14% Similarity=0.150 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.+++|++. +++.++|+-....+..+.++.|+..--+.++ .+.+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~--~~~~~------------------------- 148 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIF--VSEDA------------------------- 148 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEE--EcCcc-------------------------
Confidence 5789999999999999 9999999999999999999999842111110 00000
Q ss_pred EEecChhhHHHHHHHHHHhhc-CCCCCEEEEEcCCc-CCHHhhhcCCceE-EEcc-CccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKI-SAGREVVAVTGDGT-NDGPALKKADVGF-AMGI-TGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~-~~~~~~V~~iGDG~-ND~~aLk~AdVGi-amg~-~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....|+ ..+.....+. + ....+.++++||+. +|+.+=+.+++-. .... ...+.....+|+++. +++.+..
T Consensus 149 -~~~KP~--~~~~~~~~~~-~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 149 -GIQKPD--KEIFNYALER-MPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred -CCCCCC--HHHHHHHHHH-hcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 011232 2233333222 2 33446799999998 8999999999633 2221 111122234566665 5665544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.23 Score=51.58 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-+.+ +.+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i--~~~~~~------------------------- 136 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVV--IFSGDV------------------------- 136 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEE--EEcCCC-------------------------
Confidence 688999999999999999999999988877 5565568884211111 111000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
....|. ..+.+.+.+. ++...+.++++||...|+.+-+++++-
T Consensus 137 -~~~KP~--~~~~~~~~~~-~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 137 -GRGKPD--PDIYLLALKK-LGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred -CCCCCC--HHHHHHHHHH-cCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 011222 1222222222 244567889999999999998888863
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.2 Score=64.55 Aligned_cols=38 Identities=8% Similarity=0.130 Sum_probs=32.6
Q ss_pred CCCccHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHc
Q psy10301 639 PVRPEVPEAIKKC-QRAGITIRMVTGDNINTARSIATKC 676 (1119)
Q Consensus 639 plr~~v~~aI~~l-~~aGI~v~m~TGD~~~ta~~ia~~~ 676 (1119)
.+-+++.+++++| ++.|+.|+++||+...+.......+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4567899999997 7889999999999999998877543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.094 Score=54.72 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=60.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+++|+++.++|+... +..+.+.+|+...-+. ++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAEI------------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhhc-------------------------
Confidence 5789999999999999999999997532 4567778887422111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
.+..|. .++.+...+. ++...+.++++||+.+|+.+-+.|++-.
T Consensus 138 -~~~kp~--p~~~~~~~~~-~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 138 -KKGKPD--PEIFLAAAEG-LGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred -CCCCCC--hHHHHHHHHH-cCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 111232 2222222221 2444567889999999999999998753
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.14 Score=53.36 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=62.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.++++.|++.|+++.++|+. ..+..+.+.+|+..--+. ++.+.+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~--v~~~~~-------------------------- 137 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA--IVDADE-------------------------- 137 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE--eeehhh--------------------------
Confidence 68999999999999999999999987 567777888888321111 111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
..+..|.. .+.....+. ++...+.++++||+.+|+.+=+.|++..
T Consensus 138 ~~~~kp~~--~~~~~~~~~-~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 138 VKEGKPHP--ETFLLAAEL-LGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred CCCCCCCh--HHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 00122322 222222222 2444567889999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.071 Score=54.51 Aligned_cols=98 Identities=15% Similarity=0.257 Sum_probs=67.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++.|++.+.+++|++.|++++++|+..........+..|+...-+.++ .+.+..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~--~~~~~~----------------------- 130 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEII--SSDDVG----------------------- 130 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEE--EGGGSS-----------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccc--ccchhh-----------------------
Confidence 3578999999999999999999999999999999999999852212111 111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
...|+ ..+.+.+.+. ++...+.++++||+..|+.+-+.|++--
T Consensus 131 ---~~Kp~--~~~~~~~~~~-~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 ---SRKPD--PDAYRRALEK-LGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp ---SSTTS--HHHHHHHHHH-HTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred ---hhhhH--HHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 01122 2233333332 2556678999999999999999988653
|
... |
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.24 Score=51.96 Aligned_cols=119 Identities=25% Similarity=0.375 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhc-----CchhhhHHHHhhh
Q psy10301 639 PVRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRD-----NNGEVQQNLLDKV 712 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI-~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~-----~~~~~~~~~~~~i 712 (1119)
|+-|+..++|+.+++.|- .++++|--|.--...+-+..||.. -|.+...+ +.|... +
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d-----------~F~~IfTNPa~~da~G~L~------v 146 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD-----------LFSEIFTNPACVDASGRLL------V 146 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH-----------HHHHHhcCCcccCCCCcEE------e
Confidence 778999999999999997 899999999988888888888731 11111000 000000 0
Q ss_pred cC-ce-EEEEecChh--hHHHHHHHHHHhhcCCC--CCEEEEEcCCcCC-HHhhhcCCceEEEccCccHH
Q psy10301 713 WP-RL-RVLARSSPS--DKYTLVKGMIDSKISAG--REVVAVTGDGTND-GPALKKADVGFAMGITGTDV 775 (1119)
Q Consensus 713 ~~-~~-~v~ar~sP~--~K~~iV~~l~~~~~~~~--~~~V~~iGDG~ND-~~aLk~AdVGiamg~~g~~~ 775 (1119)
.+ +. .-|.+ .|. =|..++..+..+.++.. .+.+..+|||.|| +|+++...--+||-..|-..
T Consensus 147 ~pyH~~hsC~~-CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 147 RPYHTQHSCNL-CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred ecCCCCCccCc-CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 00 00 11233 343 37777777766544443 3489999999999 57877777777776555444
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.42 Score=50.12 Aligned_cols=37 Identities=8% Similarity=0.196 Sum_probs=33.1
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 643 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 643 ~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4668899999999999999999998888999999974
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.45 Score=49.43 Aligned_cols=116 Identities=15% Similarity=0.101 Sum_probs=72.8
Q ss_pred EEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHH
Q psy10301 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707 (1119)
Q Consensus 629 ~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD-~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 707 (1119)
......+-+-++.|++.+.++.|+++|+++.++|+- ....+..+...+|+...+... .+ ..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------~~------------~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------PM------------HS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------cH------------HH
Confidence 344555556678999999999999999999999976 889999999999984221100 00 00
Q ss_pred HHhhhcCceEEEEecChhhH--HHHHHHHHHhhc--CCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 708 LLDKVWPRLRVLARSSPSDK--YTLVKGMIDSKI--SAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 708 ~~~~i~~~~~v~ar~sP~~K--~~iV~~l~~~~~--~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
.++. .+.++..+..| ..+.+.+.+. + +-..+.++++||...|+.+-++|++-+..
T Consensus 97 ~Fd~-----iv~~~~~~~~kp~~~i~~~~~~~-~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LFDD-----RIEIYKPNKAKQLEMILQKVNKV-DPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hcee-----eeeccCCchHHHHHHHHHHhhhc-ccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0111 12222211112 1223332111 1 13457899999999999999999886653
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.27 Score=50.89 Aligned_cols=87 Identities=20% Similarity=0.214 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~-~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.+-|++.++++.|++.|+++.++|+.+ ...+..+++.+|+.. .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------~----------------------------- 86 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------L----------------------------- 86 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------E-----------------------------
Confidence 578999999999999999999999988 677778888888721 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCce
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 765 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVG 765 (1119)
.....|. ..+...+.+. +....+.++|+||.. .|..+=+.|++-
T Consensus 87 -~~~~KP~--p~~~~~~l~~-~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 87 -PHAVKPP--GCAFRRAHPE-MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -cCCCCCC--hHHHHHHHHH-cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 0011232 1222222222 244567799999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.16 Score=55.85 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=53.9
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC--------CceEEEccCccHHHHhccCeeeccCChh
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--------DVGFAMGITGTDVAKEASDIILTDDNFS 790 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A--------dVGiamg~~g~~~ak~aaDiil~d~~f~ 790 (1119)
-.+..+.+|...++.+.+. +......++++||+.||.+|++.+ ..|++|+ .| ..+..|++++. +..
T Consensus 160 e~~p~~~~Kg~a~~~~~~~-~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWH-QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEeeCCCCHHHHHHHHHHh-cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 3445577999999998765 344456789999999999999998 4788885 23 24567889887 666
Q ss_pred HHHHHHH
Q psy10301 791 SIVKAVM 797 (1119)
Q Consensus 791 ~i~~~i~ 797 (1119)
.+...+.
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 6665553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.3 Score=49.22 Aligned_cols=100 Identities=20% Similarity=0.239 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 703 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~---------------~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~ 703 (1119)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+... ..+....+.. +
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~------~---- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPA------D---- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCC------C----
Confidence 4789999999999999999999998762 345566677777310 0000000000 0
Q ss_pred hhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 704 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 704 ~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
..-.+ .| +.++...+.+. ++...+.++++||...|+.+-+.+++-.
T Consensus 96 -------------~~~~~-KP--~~~~~~~~~~~-~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 -------------NCSCR-KP--KPGLILEALKR-LGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred -------------CCCCC-CC--CHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00001 23 23344444333 3555677999999999999999888754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.1 Score=52.73 Aligned_cols=95 Identities=16% Similarity=0.015 Sum_probs=65.0
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-++||++.+.++.|+ .++++.++|.-+...+..+.+.+|+...-.. .++.+.+..
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~-~i~~~~d~~----------------------- 98 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY-RRLFRDECV----------------------- 98 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee-eEEECcccc-----------------------
Confidence 357999999999999 5799999999999999999999887321001 112211110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
+..|. +.+.+.. +....+.+.++||..+|..+-+.|+|-|
T Consensus 99 ---~~KP~----~~k~l~~--l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 99 ---FVKGK----YVKDLSL--LGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ---ccCCe----EeecHHH--cCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 11222 3343322 3556678999999999999887776655
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.42 Score=49.70 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNI 666 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~ 666 (1119)
+.|++.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.28 Score=57.74 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=64.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT-KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~-~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+...-+. ++.+.+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~v------------------------ 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDEV------------------------ 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhhc------------------------
Confidence 467999999999999999999999999888877665 5777321111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
.+..|.- ..+.+.+.+ ++...+.++++||+.+|+.+-+.|++..
T Consensus 147 --~~~KP~p-~~~~~a~~~--lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 147 --EKGKPSP-DIFLEAAKR--LNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred --CCCCCCH-HHHHHHHHH--cCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 1112321 112222222 2445677999999999999999999764
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.37 Score=48.66 Aligned_cols=91 Identities=16% Similarity=0.264 Sum_probs=58.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+..+++.+.++.|++.|+++.++|+-....+....+.. +.. ....+...+ + +
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~~i~~~~-~-------------------------~ 115 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFDLILGSD-E-------------------------F 115 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCcEEEecC-C-------------------------C
Confidence 34579999999999999999999999999888877765 321 111111100 0 0
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 763 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad 763 (1119)
. ..| +..+...+.++ ++... .++++||..+|+.+-+.|+
T Consensus 116 -~-~Kp--~~~~~~~~~~~-~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 116 -G-AKP--EPEIFLAALES-LGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -C-CCc--CHHHHHHHHHH-cCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 0 122 22333333332 24444 7899999999998877764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.6 Score=51.86 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=57.6
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNIN---TARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~---ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
..++-|++.+.++.+++.|+++.++|+.... .+....++.|+-....+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~---------------------------- 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH---------------------------- 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce----------------------------
Confidence 3467899999999999999999999998744 334556678884322222
Q ss_pred CceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhh
Q psy10301 714 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK 760 (1119)
Q Consensus 714 ~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk 760 (1119)
++.|-....|..-.+.+. +...+++++||..+|.....
T Consensus 168 ----lllr~~~~~K~~rr~~I~-----~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 ----LLLKKDKSSKESRRQKVQ-----KDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred ----EEeCCCCCCcHHHHHHHH-----hcCCEEEEECCCHHHhhhhh
Confidence 233322233444444432 24568999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.65 E-value=1.7 Score=50.18 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHhhcCCC---CCEEEEEcCCcCCHHhhhcC-----CceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAG---REVVAVTGDGTNDGPALKKA-----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~---~~~V~~iGDG~ND~~aLk~A-----dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
-+|...|+.+.++ +... +..++++||...|-.|++.. ++||.+|. ... ...|++.|. +...+...+
T Consensus 282 ~dKG~Av~~LL~~-l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~-~~k--~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLES-LGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSK-FPK--DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHh-cccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECC-CCC--CCcceEeCC--CHHHHHHHH
Confidence 3999999998764 2211 34689999999999998855 46777772 111 356788886 566665544
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.79 Score=48.64 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...-+.++ .+.+ +
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~--~s~~-------------------------~ 156 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVV--TSYE-------------------------V 156 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEE--eecc-------------------------c
Confidence 57899999999999999999999976543 466777788732111110 0000 0
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCce
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 765 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVG 765 (1119)
....|+ ..+.....+. ++...+.++++||+. +|+.+=++|++-
T Consensus 157 -~~~KP~--~~~~~~~~~~-~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 157 -GAEKPD--PKIFQEALER-AGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred -CCCCCC--HHHHHHHHHH-cCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 001232 1233333222 345567899999997 899988888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.54 Score=50.77 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARS-IATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~-ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.|+.|++.|+++.++||-....... ..+..|+...-+. ++.+.+. .
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~--i~~~~~~-----------------------~ 132 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHH--VVTGDDP-----------------------E 132 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCE--EEECChh-----------------------h
Confidence 578999999999999999999999977654432 2222233211111 1111100 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcC---CCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKIS---AGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~---~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
+.+..|+- .+.....+. +. ...+.++++||+..|+.|-++|++-..
T Consensus 133 -~~~~KP~p--~~~~~a~~~-~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 133 -VKQGKPAP--DIFLAAARR-FEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred -ccCCCCCc--HHHHHHHHH-hCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 00112221 122222211 22 345779999999999999999997543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.26 Score=53.53 Aligned_cols=116 Identities=22% Similarity=0.361 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC-c
Q psy10301 639 PVRPEVPEAIKKC--QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP-R 715 (1119)
Q Consensus 639 plr~~v~~aI~~l--~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~-~ 715 (1119)
|+.|+.+++++.| ++.|+.+.++|--|..-...+-+.-|+...-.. +.-+-..++. .+.+ .+.+ .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-----~G~l------~v~pyh 138 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-IFTNPACFDA-----DGRL------RVRPYH 138 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-EEeCCceecC-----CceE------EEeCcc
Confidence 7889999999999 568999999999999999999999998432111 1111111110 0000 0000 0
Q ss_pred eEEEEecCh-hhHHHHHHHHHHhhcC--CCCCEEEEEcCCcCCH-Hhhh--cCCceE
Q psy10301 716 LRVLARSSP-SDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDG-PALK--KADVGF 766 (1119)
Q Consensus 716 ~~v~ar~sP-~~K~~iV~~l~~~~~~--~~~~~V~~iGDG~ND~-~aLk--~AdVGi 766 (1119)
.+-|.+|.| -=|..+++.+++...+ .....|.++|||.||. |+++ .+|+-+
T Consensus 139 ~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 139 SHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 012334444 3699999998765322 2347999999999995 5543 555544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.40 E-value=1.3 Score=44.89 Aligned_cols=107 Identities=20% Similarity=0.208 Sum_probs=71.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc-----CCcCCCCceEEEec-HhHHHHhhcCchhhhHHH
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR---SIATKC-----GIVKPGEDYLILEG-KEFNRRVRDNNGEVQQNL 708 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~---~ia~~~-----Gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~ 708 (1119)
|-.++++.+..+++++.|.+++.+|++..--|. ...... ++ |...+ .++. ..+..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gpv-~~sP~~l~~al~----------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGPV-LLSPDSLFSALH----------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCCE-EECCcchhhhhh-----------
Confidence 799999999999999999999999999965543 333333 33 22222 2221 1111110
Q ss_pred HhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 709 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 709 ~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
-.++.+-.-+.|...++.++..........++..|+..+|+.+.++++|-
T Consensus 92 -------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 -------REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -------ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 02444545567888888886542224677899999999999999988765
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.72 Score=45.33 Aligned_cols=39 Identities=8% Similarity=0.180 Sum_probs=34.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCG 677 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD-~~~ta~~ia~~~G 677 (1119)
++.|++.+.++.|+++|+++.++|+- ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777766666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.17 E-value=0.49 Score=48.56 Aligned_cols=101 Identities=21% Similarity=0.216 Sum_probs=61.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN---------------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 703 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~---------------~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~ 703 (1119)
++-|++.+++++|+++|+++.++|.-. ...+..+.+..|+. -+. +.. +....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~-ii~-~~~~~--------- 95 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDD-VLI-CPHFP--------- 95 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeE-EEE-CCCCC---------
Confidence 467899999999999999999999742 34556666777772 000 111 00000
Q ss_pred hhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 704 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 704 ~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
.-.+.. ..| |..++..+.+. ++...+.+.|+||+.+|..+-+.|++-..
T Consensus 96 -----------~~~~~~-~KP--~~~~~~~~~~~-~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 96 -----------DDNCDC-RKP--KIKLLEPYLKK-NLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----------CCCCCC-CCC--CHHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 000000 123 23344444332 24455679999999999999999987754
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.59 Score=53.70 Aligned_cols=94 Identities=12% Similarity=0.200 Sum_probs=71.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~----~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
++.+++.++++.|++.|+++.++|.-+...|..+.++ +|+.. .+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~---~f----------------------------- 78 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAE---DF----------------------------- 78 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHH---He-----------------------------
Confidence 4578999999999999999999999999999998887 66621 10
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
......++.|...++.+.+. ++.....++++||...|..+.+.+...+.+
T Consensus 79 ---~~~~~~~~pk~~~i~~~~~~-l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 79 ---DARSINWGPKSESLRKIAKK-LNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred ---eEEEEecCchHHHHHHHHHH-hCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 01122244566666666554 455667899999999999999998877644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=90.85 E-value=2.2 Score=46.99 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhc-CCceEEEc
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKK-ADVGFAMG 769 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~-AdVGiamg 769 (1119)
+|..-++.| + ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 189 nKg~al~~L-----~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFL-----E-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHh-----c-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 799988887 3 5678899999 8999999997 66788774
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.92 E-value=1 Score=52.15 Aligned_cols=101 Identities=25% Similarity=0.210 Sum_probs=61.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGD---------------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 703 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD---------------~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~ 703 (1119)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+. -+.+.+...... +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~s----d---- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPE----D---- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCc----c----
Confidence 68999999999999999999999983 133455566666662 011111100000 0
Q ss_pred hhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 704 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 704 ~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
...+| .| |..++..+.+. +......+.|+||+.+|..+-+.|++-..
T Consensus 99 -------------~~~~r-KP--~p~~l~~a~~~-l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 -------------NCSCR-KP--KTGLVEEYLAE-GAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------------cCCCC-CC--CHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 22 23344433322 34455789999999999999999998764
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=89.78 E-value=3.2 Score=45.56 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=37.4
Q ss_pred EEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCc
Q psy10301 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR--SIATKCGIV 679 (1119)
Q Consensus 632 G~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~--~ia~~~Gi~ 679 (1119)
|++.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 344445678899999999999999999999996554443 566788884
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.73 E-value=0.6 Score=50.31 Aligned_cols=97 Identities=11% Similarity=0.151 Sum_probs=62.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|+++++++.| ++++.++|+.....+...-+..|+...-+. .++.+.+..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~------------------------ 139 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQ------------------------ 139 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcC------------------------
Confidence 4668999999998 489999999998888888888888421111 122222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
+..|. -.+.....+. ++...+.++++||..+|+.+=++|++....
T Consensus 140 --~~KP~--p~~~~~a~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 140 --RWKPD--PALMFHAAEA-MNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred --CCCCC--hHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11121 2222222222 344556789999999999999999987653
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.73 E-value=1.1 Score=48.35 Aligned_cols=99 Identities=11% Similarity=0.179 Sum_probs=64.3
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhc
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG---IVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVW 713 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~G---i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~ 713 (1119)
+-++.||+.+++++|+++|+++.++|..+......+.+..+ +.. .++...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~---------------------------~f~~~f 145 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP---------------------------YFSGYF 145 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh---------------------------hcceEE
Confidence 34789999999999999999999999998887777666552 210 000000
Q ss_pred CceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE
Q psy10301 714 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 768 (1119)
Q Consensus 714 ~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam 768 (1119)
. ..+ + ..| +......+.+. ++...+.++++||...|+.|=++|++-...
T Consensus 146 d-~~~-g-~KP--~p~~y~~i~~~-lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 146 D-TTV-G-LKT--EAQSYVKIAGQ-LGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred E-eCc-c-cCC--CHHHHHHHHHH-hCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 0 011 1 122 22223332222 245557799999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=89.01 E-value=1.8 Score=46.77 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCC
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGI 678 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~t---a~~ia~~~Gi 678 (1119)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~ 162 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGF 162 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCC
Confidence 4788999999999999999999999999765 3333455676
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.52 E-value=2 Score=44.25 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=31.6
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCC
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNIN------------TARSIATKCGI 678 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~------------ta~~ia~~~Gi 678 (1119)
+-|++.++++.|+++|+++.++|.-... .+..+.+.+|+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 4489999999999999999999975442 35567788887
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.03 E-value=2.8 Score=43.16 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=61.9
Q ss_pred cCCCCccHHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHH
Q psy10301 637 EDPVRPEVPEAIKKCQRAGI--TIRMVTGD-------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI--~v~m~TGD-------~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 707 (1119)
++.+-|++.+.+++|++.+. +|.++|-- +...|..+++.+|+- +
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-----v---------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-----V---------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----E----------------------
Confidence 45688999999999999987 59999886 488999999999982 0
Q ss_pred HHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhc
Q psy10301 708 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKK 761 (1119)
Q Consensus 708 ~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~ 761 (1119)
-.+....|.-..++.+.+.........+.++|+||-. .|+-+=..
T Consensus 110 ---------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~ 155 (168)
T PF09419_consen 110 ---------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNR 155 (168)
T ss_pred ---------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhc
Confidence 0112235765566777664321123467799999974 46654443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=86.96 E-value=1.2 Score=59.35 Aligned_cols=121 Identities=12% Similarity=0.179 Sum_probs=76.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+.||+.+.++.|+++|+++.++|+-....+..+.+..|+....-+. ++.+.+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~-iv~~~~-------------------------- 213 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA-IVSADA-------------------------- 213 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE-EEECcc--------------------------
Confidence 36799999999999999999999999999999888999983111111 111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE-EEc--cCccHHHHhccCeeeccCChhH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMG--ITGTDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi-amg--~~g~~~ak~aaDiil~d~~f~~ 791 (1119)
+.+..|+. ++.....+. ++...+.++++||..+|+.+-+.|++-. ++. ....+.....+|+++. ++..
T Consensus 214 ~~~~KP~P--e~~~~a~~~-lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~e 284 (1057)
T PLN02919 214 FENLKPAP--DIFLAAAKI-LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGN 284 (1057)
T ss_pred cccCCCCH--HHHHHHHHH-cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHH
Confidence 11122322 222222222 3555677999999999999999999733 222 1112234456788887 4444
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=86.06 E-value=0.87 Score=48.69 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=56.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINT--ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~t--a~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
++.|++.+.++.|++.|+++.++|...... ........++... ++.+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~---------------------------fd~v~~s~ 146 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL---------------------------FDAVVESC 146 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh---------------------------CCEEEEee
Confidence 678999999999999999999999875433 2222222333111 11100000
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
.+ ....|+-. +.....+. ++...+.++++||...|+.+=++|++-.
T Consensus 147 ~~-~~~KP~p~--~~~~~~~~-~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 147 LE-GLRKPDPR--IYQLMLER-LGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred ec-CCCCCCHH--HHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 00 00123321 22222221 2445567888899999999999998753
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=85.34 E-value=2.4 Score=44.71 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. ...+ ...+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f---------------------------~~~f-~~i~ 124 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF---------------------------PGAF-SEVL 124 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC---------------------------CCcc-cEEE
Confidence 47899999999999985 56666765544444444566662100 0000 0112
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC--CceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--DVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A--dVGi 766 (1119)
.++..+ -|..++....+. ++ .+.++++||..+|+.+-++| ++-.
T Consensus 125 ~~~~~~-~kp~~~~~a~~~-~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 125 MCGHDE-SKEKLFIKAKEK-YG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred EeccCc-ccHHHHHHHHHH-hC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 222222 144555555443 23 45688999999999999999 8854
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.81 E-value=4.8 Score=41.91 Aligned_cols=95 Identities=14% Similarity=0.070 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.+++.+++++|+ .++.++|.-+...+..+.+..|+...-+.+++ +.+ +
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~--~~~-------------------------~ 133 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFC--FDT-------------------------A 133 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEE--eec-------------------------c
Confidence 46789999999998 47899999999999999999998421111111 000 0
Q ss_pred EEe---cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 719 LAR---SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar---~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
-.+ ..|. ..+.....+. ++...+.++++||...|+.+=++|++..
T Consensus 134 ~~~~~~~KP~--p~~~~~~~~~-~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 NPDYLLPKPS--PQAYEKALRE-AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cCccCCCCCC--HHHHHHHHHH-hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 011 1332 2233333332 3555677889999999999988887654
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.85 E-value=3.6 Score=43.53 Aligned_cols=97 Identities=11% Similarity=0.162 Sum_probs=58.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~-~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.++++.|+++|+++.++|.-+.......... .++...-+. +. ...+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~-v~-~s~~------------------------- 136 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADH-IY-LSQD------------------------- 136 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCE-EE-Eecc-------------------------
Confidence 4789999999999999999999999776554332222 233110000 00 0000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
+....|+ ..+.+...+. ++...+.++++||...|+.+=++|++-.
T Consensus 137 -~~~~KP~--p~~~~~~~~~-~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 137 -LGMRKPE--ARIYQHVLQA-EGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred -cCCCCCC--HHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 0011232 2333333322 3556677899999999999999998754
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=80.68 E-value=4.2 Score=46.54 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=38.1
Q ss_pred EEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCC
Q psy10301 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGI 678 (1119)
Q Consensus 632 G~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia---~~~Gi 678 (1119)
|++--.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 344444566699999999999999999999999987777777 55776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1119 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-76 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-76 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-75 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-75 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 6e-68 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-67 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-63 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-63 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-36 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-23 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 8e-18 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 5e-14 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 5e-14 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-12 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-12 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-12 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-12 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 1e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 6e-06 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1119 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-164 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-152 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-31 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-30 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-28 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-11 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-10 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-12 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-08 | |
| 2kne_B | 28 | CAM, ATPase, Ca++ transporting, plasma membrane 4; | 3e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 5e-06 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 7e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 5e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 636 bits (1642), Expect = 0.0
Identities = 228/1046 (21%), Positives = 394/1046 (37%), Gaps = 163/1046 (15%)
Query: 41 EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIA 100
E+ +K TS +GL S + G N + P L ++ +A
Sbjct: 60 ELEQKYQTSATKGL--SASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117
Query: 101 ALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQN 160
A + L ++ A++ V+V + ++ +N
Sbjct: 118 AAICLIAFAIQASEGDLTTDDN----LYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN 173
Query: 161 QIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGE 220
+ + VIR + QI +VVGD+ ++K GD +PAD ++Q+ K+D SSLTGE
Sbjct: 174 LVPQQAT--VIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGE 231
Query: 221 SDHVKKGELFDP--------MVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEE 272
S+ + + T +EG+ + +V G + G I +L ++E
Sbjct: 232 SEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE- 290
Query: 273 VKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAI 332
K+ + ++ I
Sbjct: 291 ------------------------------------KTPIAIEIEHFVDIIAGLAILFGA 314
Query: 333 LTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYS 392
++ + F+R + + ++V VPEGL VT+ L+ +
Sbjct: 315 TFFIVAM-----------------CIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357
Query: 393 VKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDI 452
K++ N +V++L+A ET+G+ + ICSDKTGTLT NRMT + + + ED
Sbjct: 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH-SADTTEDQ 416
Query: 453 PEDIASKIVEGISVNSGYTSKIMA--------PENANELPKQ---VGNKTECALLGFVVA 501
+ E +++ + +G+ +E ALL F
Sbjct: 417 SGQTFDQSSETWR----ALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSEL 472
Query: 502 IGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVI----PKKNGYRVYTKGASEIILKK 555
N R+ P +V FNS K ++ P+ + + KGA E +L++
Sbjct: 473 TLGNAMGYRERFP-----KVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLER 527
Query: 556 CSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 615
CS I G + + + + G R +
Sbjct: 528 CSSIL-IKGQELPLDEQWREA-FQTAYLSLGGLGERVLGFCQLYLSEKDYPPGY-----A 580
Query: 616 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 675
+ + + S L+ ++ + DP R VP+A+ KC+ AGI + MVTGD+ TA++IA
Sbjct: 581 FDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS 640
Query: 676 CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL--------------LDKVWPRLR--VL 719
GI+ G + + V N + + L + V
Sbjct: 641 VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVF 700
Query: 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 779
AR+SP K +V+ +VAVTGDG ND PALKKAD+G AMGI G+D AK A
Sbjct: 701 ARTSPQQKLVIVESC-----QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755
Query: 780 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVN---VVAVIVAFIGACAVQDSPL 836
+D+IL DDNF+SIV V GR ++D++ K + + LT N + ++ + + PL
Sbjct: 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPL---PL 812
Query: 837 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMM--KNIIGQAIYQL 894
+ +L++ L D S++LA E D++ +P + + + + Q
Sbjct: 813 GCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQS 872
Query: 895 VIIFGILFFG----------------------DKLLDIPTGRGAEYGSLPTQH---FTII 929
F F + L G+ +G Q +T+
Sbjct: 873 FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVF 932
Query: 930 FNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQYGGI--AFA 986
F + + + + + + + F+ G F N I V + + G+ F
Sbjct: 933 FISIEMCQIADVLIRKTRR--LSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFN 990
Query: 987 THSLTLEQWGWCLFFGVGTLVWQQIV 1012
+ + W + FG+ V+ +I
Sbjct: 991 FMPIRFQWWLVPMPFGLLIFVYDEIR 1016
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 635 bits (1639), Expect = 0.0
Identities = 242/1042 (23%), Positives = 412/1042 (39%), Gaps = 152/1042 (14%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
+ E+ K T GL + + G N + P P+ L I+L
Sbjct: 53 LDELHNKYGTDLTRGL--TNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 99 IAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGL 158
I A+ L F G ++ ++E G + VIV + + + +
Sbjct: 111 IGAI----LCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSF 166
Query: 159 QNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLT 218
+N + + VIR E I +V GD+ ++K GD +PAD +I ++ K+D SSLT
Sbjct: 167 KNMVPQQAL--VIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 219 GESDHVKKGELFDP--------MVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDD 270
GES+ + F + T+ +EG+ + VV G + G I TL +
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 271 EEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTI 330
++ + ++ I T
Sbjct: 285 G-------------------------------------RTPIAIEIEHFIHII-----TG 302
Query: 331 AILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLA 390
+ + + F++ I ++ + + ++V VPEGL VT+ L
Sbjct: 303 VAVFLGVSF-------FILS-----LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLT 350
Query: 391 YSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY-----KN 445
+ K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMT + + +N
Sbjct: 351 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEN 410
Query: 446 IPKYEDIPEDIASKIVEGISV--NSGYTSKIMAPENANELPKQ--VGNKTECALLGFVVA 501
+ I+ N + A ++ + K+ G+ +E ALL +
Sbjct: 411 QSGAAFDKTSATWSALSRIAALCNR---AVFQAGQDNVPILKRSVAGDASESALLKCIEL 467
Query: 502 IGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVIPKKNG----YRVYTKGASEIILKK 555
+ Q +RD P ++ FNS K ++ + Y + KGA E IL +
Sbjct: 468 CCGSVQGMRDRNP-----KIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDR 522
Query: 556 CSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 615
CS I NG E +DM+ +N + G R + + DK +
Sbjct: 523 CSTIL-LNGAEEPLKEDMKEA-FQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADE 580
Query: 616 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 675
PN + L + ++ + DP R VP+A+ KC+ AGI + MVTGD+ TA++IA
Sbjct: 581 PN-----FPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 635
Query: 676 CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ----------NLLDKVWPRL------RVL 719
GI+ G + + N + N + +L +V + V
Sbjct: 636 VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVF 695
Query: 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 779
AR+SP K +V+G +VAVTGDG ND PALKKAD+G AMGI+G+DV+K+A
Sbjct: 696 ARTSPQQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQA 750
Query: 780 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV 839
+D+IL DDNF+SIV V GR ++D++ K + + LT N+ + + PL V
Sbjct: 751 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTV 810
Query: 840 QMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFG 899
+L ++L D + +++LA E D++ R+P + + ++ I + + G
Sbjct: 811 TILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGG 870
Query: 900 ILFF------------------------GDKLLDIPTGRGAEYGSLPTQH---FTIIFNT 932
+ ++ G+ Y T F +
Sbjct: 871 FFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFIS 930
Query: 933 FVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGI--AFATHSL 990
V++ + I + ++F+ N I + G A + L
Sbjct: 931 IVVVQWADLIICKTRR--NSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPL 988
Query: 991 TLEQWGWCLFFGVGTLVWQQIV 1012
W + + ++ ++
Sbjct: 989 KPSWWFCAFPYSLIIFLYDEMR 1010
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 628 bits (1621), Expect = 0.0
Identities = 272/1057 (25%), Positives = 453/1057 (42%), Gaps = 164/1057 (15%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
E S GL + ++ E +G N +P + K+ +LV E +D+ + IL
Sbjct: 10 TEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 99 IAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGL 158
+AA +S L+++ + EET ++E IL+ +I +V + + + E L
Sbjct: 68 LAACISFVLAWFE-------EGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL 120
Query: 159 QNQIEGEHKFAVIR--QNELKQIFVGDIVVGDICQIKYGDLLPADG--ILIQSNDLKIDE 214
+ K V R + +++I DIV GDI ++ GD +PAD + I+S L++D+
Sbjct: 121 KEYEPEMGK--VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQ 178
Query: 215 SSLTGESDHVKK--GELFDP---------MVLSGTHVMEGSGKMVVTAVGVNSQAGIIFT 263
S LTGES V K + DP M+ SGT++ G +V GV+++ G I
Sbjct: 179 SILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRD 238
Query: 264 LLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQI 323
+ AT+ + K+ LQ KL + Q+
Sbjct: 239 QMAATEQD-------------------------------------KTPLQQKLDEFGEQL 261
Query: 324 GYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPL 383
S I + +I I D + R + +F + V + V A+PEGLP
Sbjct: 262 SKVISLICVAVWLINI-------GHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPA 314
Query: 384 AVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 443
+T LA ++M K N +VR L + ET+G + ICSDKTGTLTTN+M+ + ++ +
Sbjct: 315 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVD 374
Query: 444 KNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANEL-------------------- 483
+ + ++ EG + + + + EL
Sbjct: 375 GDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGV 434
Query: 484 PKQVGNKTECALLGFVVAIGKNYQTVRDDLP-----------EEVFTRVYT--FNSVRKS 530
++VG TE AL V + VR+ ++ + +T F+ RKS
Sbjct: 435 YEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKS 494
Query: 531 MSTVI------PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGR-LVRNVIE 583
MS G +++ KGA E ++ +C+Y+ T ++ + L
Sbjct: 495 MSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-VGTTRVPMTGPVKEKILSVIKEW 553
Query: 584 PMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPE 643
D LR +++A +D + E+ + + LT + V+G+ DP R E
Sbjct: 554 GTGRDTLRCLALATRDTPPKREEMVL------DDSSRFMEYETDLTFVGVVGMLDPPRKE 607
Query: 644 VPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY--LILEGKEFNRRVRDNN 701
V +I+ C+ AGI + M+TGDN TA +I + GI E+ G+EF D+
Sbjct: 608 VMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-----DDL 662
Query: 702 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK 761
+ + R AR PS K +V+ + + E+ A+TGDG ND PALKK
Sbjct: 663 PLAE---QREACRRACCFARVEPSHKSKIVEYL-----QSYDEITAMTGDGVNDAPALKK 714
Query: 762 ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV 821
A++G AMG +GT VAK AS+++L DDNFS+IV AV GR +Y+++ +F+++ ++ NV V
Sbjct: 715 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 773
Query: 822 IVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKT 881
+ F+ A L VQ+LWVNL+ D L + AL P D++ R P + LIS
Sbjct: 774 VCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGW 833
Query: 882 MMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHF--------------- 926
+ + Y G + + G G Y L
Sbjct: 834 LFFRYMAIGGYVGAATVGAAAWW--FMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEI 891
Query: 927 -------TIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNP-IFYSIWVITMVSQVII 977
T+ + V + + N +N+ + +++ + N + SI ++M +I
Sbjct: 892 FEAPEPMTMALSVLVTIEMCNALNSLSEN--QSLMRMPPWVNIWLLGSI-CLSMSLHFLI 948
Query: 978 VQYGGIA--FATHSLTLEQWGWCLFFGVGTLVWQQIV 1012
+ + F +L L QW L + + +I+
Sbjct: 949 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEIL 985
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 508 bits (1310), Expect = e-164
Identities = 187/1024 (18%), Positives = 380/1024 (37%), Gaps = 162/1024 (15%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
+ E+ ++L S EGL + + E R ++FG N + K L+ + + ++E
Sbjct: 19 IEEVFQQLKCSR-EGL--TTQEGEDRIQIFGPNKLEEKKESKLLKF-LGFMWNPLSWVME 74
Query: 99 IAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGL 158
+AA++++ L+ +W + I+ +++ ++ + + L
Sbjct: 75 MAAIMAIALANGDGRPP----------DWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 159 QNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLT 218
+ + K V+R + + +V GDI IK GD++PAD L++ + LK+D+S+LT
Sbjct: 125 MAGLAPKTK--VLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 219 GESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKK 278
GES V K V SG+ +G + VV A GV++ G L+ +T+
Sbjct: 183 GESLPVTKHP--GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV------- 233
Query: 279 DKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVIL 338
Q LT IG + +VI
Sbjct: 234 -------------------------------GHFQKVLT----AIGNFCICSIAIGMVIE 258
Query: 339 ISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMK 398
I V+ I R++ + +L+ +P +P +++++A ++ +
Sbjct: 259 I-------IVMY-----PIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 306
Query: 399 DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIAS 458
+ + + A E M +CSDKTGTLT N+++ V + EV K + + +
Sbjct: 307 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS-VDKNLVEVFCKGVE-----KDQVL- 359
Query: 459 KIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVF 518
+ A + + + + A++G + + R + E F
Sbjct: 360 ---------------LFAAMASRV---ENQDAIDAAMVGM----LADPKEARAGIREVHF 397
Query: 519 TRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 577
FN V K + +G + +KGA E IL+ K + D+ +
Sbjct: 398 L---PFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA-----------KASNDLSKK- 442
Query: 578 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIE 637
V ++I+ A GLR++++A + E + + ++ +
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKE------------SPGAP----WEFVGLLPLF 486
Query: 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRV 697
DP R + E I++ G+ ++M+TGD + + + G+ L G + +
Sbjct: 487 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANL 546
Query: 698 RDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGP 757
++++ + A P KY +VK + + K +V +TGDG ND P
Sbjct: 547 ASIP-------VEELIEKADGFAGVFPEHKYEIVKKLQERK-----HIVGMTGDGVNDAP 594
Query: 758 ALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVN 817
ALKKAD+G A+ TD A+ ASDI+LT+ S I+ AV+ R ++ + + + +++
Sbjct: 595 ALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 653
Query: 818 VVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKAL 877
+ ++ F+ + + A +L + ++ D + ++ + P
Sbjct: 654 -IRIVFGFMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKPSPTPDSW------- 704
Query: 878 ISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQH-FTIIFNTFVLM 936
K + + YQ ++ + K G ++ ++
Sbjct: 705 KLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSII 764
Query: 937 TLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLEQWG 996
+ R + F + + + +++ +I V + G
Sbjct: 765 SQALIFVTRS---RSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAG 821
Query: 997 WCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNTRQQRAAHILWLRGLTRL 1056
+ + T + + + +W E++ A ++ R
Sbjct: 822 VIWLYSIVTYFPLDVFKFA-IRYILSGKAWLN-LFENKTAFTMKKDYGKEER-EAQWMRG 878
Query: 1057 QTQL 1060
Sbjct: 879 SHHH 882
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 478 bits (1232), Expect = e-152
Identities = 185/1027 (18%), Positives = 366/1027 (35%), Gaps = 192/1027 (18%)
Query: 39 VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
VPE L T GL + ++ RR +G N + + FL+ ++E
Sbjct: 75 VPE--DMLQTDTRVGL--TSEEVVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVME 129
Query: 99 IAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGL 158
AA+++ GL +W++ I +++ +V ++ L
Sbjct: 130 GAAVLAAGLE-----------------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 159 QNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSND-LKIDESSL 217
+ + K V+R LK+I ++V GDI Q++ G ++PADG ++ + L++D+S+L
Sbjct: 173 KKTLA--LKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSAL 230
Query: 218 TGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEK 277
TGES V K + V + + V G +V+TA G N+ G L+ A
Sbjct: 231 TGESLAVDKHK--GDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGG------ 282
Query: 278 KDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVI 337
L + + + +++
Sbjct: 283 -------------------------------SGHFTEVLNGIGTILLIL---VIFTLLIV 308
Query: 338 LISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMM 397
+S + V+ + + ++ VP GLP VT ++A +
Sbjct: 309 WVSSFYRS--------------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLA 354
Query: 398 KDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIA 457
K +V+ L A E++ +CSDKTGTLT N+++ Y PED+
Sbjct: 355 KKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---------GVDPEDLM 405
Query: 458 SKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEV 517
A K+ + + A L + K Y + L +
Sbjct: 406 ---------------LTAC--LAASRKKKGIDAIDKAFLKSL----KYYPRAKSVLSK-- 442
Query: 518 FTRVYT--FNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQ 574
+ + F+ V K + V+ G KGA +LK +++
Sbjct: 443 YKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED-------HPIPEEVD 495
Query: 575 GRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVI 634
+N + A G R++ +A K E + L ++
Sbjct: 496 QA-YKNKVAEFATRGFRSLGVARKR--------------------GEGS----WEILGIM 530
Query: 635 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 694
DP R + + + + + G++I+M+TGD + AR + + G+ + L
Sbjct: 531 PCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGG 590
Query: 695 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN 754
D G + ++ A P KY +V+ + +VA+TGDG N
Sbjct: 591 ----DMPGSEVYDFVEAA----DGFAEVFPQHKYNVVEILQQRG-----YLVAMTGDGVN 637
Query: 755 DGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 814
D P+LKKAD G A+ +D A+ A+DI+ +I+ A+ R ++ + ++ +++
Sbjct: 638 DAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRI 696
Query: 815 TVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRT 874
+++ I + A+ + L ++++ + D +A+LA+A + K
Sbjct: 697 ALSIHLEIFLGL-WIAILNRSLNIELVVFIAIFAD-VATLAIAYDNAPYSQTPVKW---- 750
Query: 875 KALISKTMMKNIIGQAIYQ--LVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNT 932
+ + G ++ ++ + + G ++F
Sbjct: 751 -------NLPKLWGMSVLLGVVLAVGTWITVT---TMYAQGENGGIVQNFGNMDEVLFLQ 800
Query: 933 FVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTL 992
L + R + + + + +I+++ +++ + G F ++
Sbjct: 801 ISLTENWLIFITR---ANGPFWSSIPSWQLSGAIFLVDILATCFTIW--GW-FEHSDTSI 854
Query: 993 EQWGWCLFFGVGTLVWQQIVTTVPTKRLPKIFSWGRGQPESEAAMNTRQQRAAHILWLRG 1052
F G V + + + G+ ++QR+ +
Sbjct: 855 VAVVRIWIFSFGIFCIMGGVYYILQDSV-GFDNLMHGKS----PKGNQKQRSLEDF-VVS 908
Query: 1053 LTRLQTQ 1059
L R+ TQ
Sbjct: 909 LQRVSTQ 915
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-31
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 43/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
I D RP + + ++K + G+ I +++GD + + ++ + I
Sbjct: 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI-------------- 175
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
+ SP DK +++ K+ V + GDG
Sbjct: 176 -----------------Q------EYYSNLSPEDKVRIIE-----KLKQNGNKVLMIGDG 207
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND AL ADV AMG G D++K +DIIL ++ +++ +
Sbjct: 208 VNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 1e-30
Identities = 54/174 (31%), Positives = 73/174 (41%), Gaps = 44/174 (25%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
VI + D +RPE EAI K + GI M+TGDN A+ +A + G+
Sbjct: 138 VIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL-------------- 183
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
D A P +K VK ++ V A+ GDG
Sbjct: 184 -----------------D------DYFAEVLPHEKAEKVK-----EVQQKY-VTAMVGDG 214
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 806
ND PAL +ADVG A+G GTDVA E +DI+L ++ + V R Y
Sbjct: 215 VNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 157 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 202
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
D V+A P K VK K+ A VVA GDG
Sbjct: 203 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 233
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 234 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 276
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 2e-28
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 451 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 496
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
D V+A P K VK K+ A VVA GDG
Sbjct: 497 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 527
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 528 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 570
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 3e-11
Identities = 65/269 (24%), Positives = 98/269 (36%), Gaps = 78/269 (28%)
Query: 170 VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILI--QSNDLKIDESSLTGESDHVKKG 227
VIR + + V ++ VGDI ++ G+ +P DG+++ +S +DES ++GE V K
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKS 193
Query: 228 ELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDE 287
+ V T G K+ T VG TLL
Sbjct: 194 K--GDEVFGATINNTGVLKIRATRVGGE-------TLL---------------------- 222
Query: 288 ESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQ------IGY---AGSTIAILTVVIL 338
+ I + + V A +K IQ + Y +AI +
Sbjct: 223 -AQI--VKL--------------VEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIY- 264
Query: 339 ISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMK 398
W I + F + VLVVA P LA +L + K +
Sbjct: 265 ---------------WYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAE 309
Query: 399 DNNLVRHLDACETMGNATAICSDKTGTLT 427
L+++ DA E TA+ DKTGTLT
Sbjct: 310 LGILIKNADALEVAEKVTAVIFDKTGTLT 338
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-28
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 43/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
++ +EDP++ PE I + Q++GI I M+TGD+ TA ++A GI
Sbjct: 548 LLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI-------------- 593
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
+V+A P DK +V ++ +VA+ GDG
Sbjct: 594 -----------------K------KVVAEIMPEDKSRIVS-----ELKDKGLIVAMAGDG 625
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND PAL KAD+G AMG TGTDVA E++ + L + I KA
Sbjct: 626 VNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-10
Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 79/270 (29%)
Query: 170 VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILI--QSNDLKIDESSLTGESDHVKKG 227
+ +++ + ++ VGD+ +++ G+ +P DG + +S +DES +TGE V K
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF---VDESMVTGEPIPVAKE 286
Query: 228 ELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKKKRDE 287
V+ T GS M VG + T+L
Sbjct: 287 A--SAKVIGATINQTGSFVMKALHVGSD-------TML---------------------- 315
Query: 288 ESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQ------IGY---AGSTIAILTVVIL 338
+ I + M V A+ ++ IQ G+ A +A+L+ ++
Sbjct: 316 -ARI--VQM--------------VSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIV- 357
Query: 339 ISQYCVKKFVIEDEEWKAI-YFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMM 397
W + + V+VL++A P L LA +S+ V K
Sbjct: 358 ---------------WALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGA 402
Query: 398 KDNNLVRHLDACETMGNATAICSDKTGTLT 427
+ L+++ +A E M + DKTGTLT
Sbjct: 403 QSGVLIKNAEALERMEKVNTLVVDKTGTLT 432
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-28
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 633 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 692
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 529 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 574
Query: 693 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 752
D V+A P K VK K+ A VVA GDG
Sbjct: 575 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 605
Query: 753 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 606 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 648
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-12
Identities = 64/275 (23%), Positives = 97/275 (35%), Gaps = 80/275 (29%)
Query: 170 VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILI--QSNDLKIDESSLTGESDHVKKG 227
VIR + + V ++ VGDI ++ G+ +P DG+++ +S +DES ++GE V K
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKS 271
Query: 228 ELFDPMVLSGTHVMEGSGKMVVTAVGVNSQ-AGIIFTLLGATDDEEVKQEKKDKKKKKRD 286
+ V T G K+ T VG + A I+
Sbjct: 272 K--GDEVFGATINNTGVLKIRATRVGGETLLAQIV------------------------- 304
Query: 287 EESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQ------IGY---AGSTIAILTVVI 337
K V A +K IQ + Y +AI +
Sbjct: 305 ----------------------KLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIY 342
Query: 338 LISQYCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMM 397
W I + F + VLVVA P LA +L + K
Sbjct: 343 ----------------WYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGA 386
Query: 398 KDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 432
+ L+++ DA E TA+ DKTGTLT +
Sbjct: 387 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPE 421
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 1e-19
Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 25/158 (15%)
Query: 487 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVIPKKNG-YRV 543
+ N + A+L + ++ F+ R+ MS V+ + +++
Sbjct: 32 LKNLLDTAVLEGTDEESA-------RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQL 84
Query: 544 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 603
KGA + IL CS + NG + M + ++ V + + GLR +++A K
Sbjct: 85 VCKGALQEILNVCSQVR-HNGEIVPLDDIMLRK-IKRVTDTLNRQGLRVVAVATKYLPAR 142
Query: 604 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVR 641
+ + + DES+ L I D
Sbjct: 143 EGDYQR---------ADESD----LILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 79.9 bits (196), Expect = 3e-15
Identities = 93/650 (14%), Positives = 184/650 (28%), Gaps = 215/650 (33%)
Query: 138 IVVVLVTAF---------NDYSKE-------KQFRGLQNQIEGEHK-FAVIR--QNELKQ 178
I+ V AF D K ++ + G + F + Q E+ Q
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80
Query: 179 IFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESD------------HVKK 226
FV +++ +I Y L I + + + D +V +
Sbjct: 81 KFVEEVL-----RINYKFL--MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133
Query: 227 GELF----------DPMVLSGTHVMEGSGKMVVTAVGVNSQA------GIIFTL-LG--A 267
+ + P + GSGK V S IF L L
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTK--LAI---- 321
+ + ++ +K + + S + + + E + +L++K + L +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 322 ---QIGYA---GSTIAILT----VVILISQYCVKKFVIEDEEWKAIYFRE----FVRFFM 367
+ A I + T V +S ++ + E +++
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM-TLTPDEVKSLLLKYLD 312
Query: 368 VGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 427
L V P +++ +A S++ + + +H++ C+ + + L
Sbjct: 313 CRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHVN-CDKLTTIIESSLNV---LE 367
Query: 428 TNRMTAVQAYVCEVQYK---------NIP-----------KYEDIPEDIASK-----IVE 462
+ + +IP D + +K +VE
Sbjct: 368 PAEY---RKM-----FDRLSVFPPSAHIPTILLSLIWFDVIKSD-VMVVVNKLHKYSLVE 418
Query: 463 G------ISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEE 516
IS+ S Y + EN L + + + Y
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDH---------------YN--------- 454
Query: 517 VFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYI-YGRNGHLEK------- 568
+ + + + P + Y Y S+I + HL+
Sbjct: 455 -IPKTFDSDDLIP------PYLDQY-FY------------SHIGH----HLKNIEHPERM 490
Query: 569 --FTK---D---MQGRLVRNVIEPMACDG--LRTIS--IAYKDFVTDKAEINQVHIEGDP 616
F D ++ ++ R+ G L T+ YK ++ D DP
Sbjct: 491 TLFRMVFLDFRFLEQKI-RHDSTAWNASGSILNTLQQLKFYKPYICDN----------DP 539
Query: 617 NWDD------------ESNIV-SHLTCLCVIGIEDPVRPEVPEAIKKCQR 653
++ E N++ S T L I + EA K+ QR
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.0 bits (165), Expect = 1e-11
Identities = 69/526 (13%), Positives = 145/526 (27%), Gaps = 154/526 (29%)
Query: 440 EVQYKNIPKYEDIPEDIASKIVEGISVN--SGYTSKIMAPENANELPKQVGNKTECALLG 497
E QY+ Y+DI V+ I++ E + + + L
Sbjct: 13 EHQYQ----YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS-KDAVSGTLRL 67
Query: 498 FVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCS 557
F + K + V+ + EEV Y F + + + S +
Sbjct: 68 FWTLLSKQEEMVQKFV-EEVLRINYKF------------LMSPIKTEQRQPS---MMTRM 111
Query: 558 YIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN 617
YI R+ RL N + A K V+ ++ +
Sbjct: 112 YIEQRD------------RL-YNDNQVFA-----------KYNVSRLQPYLKLR-QALLE 146
Query: 618 WDDESNIVSH------LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRM------VTGDN 665
N++ T + A+ C + +M + N
Sbjct: 147 LRPAKNVLIDGVLGSGKTWV---------------ALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 666 INTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL------------- 708
N+ ++ + P ++ N ++R + +Q L
Sbjct: 192 CNSPETVLEMLQKLLYQIDP--NWTSRSDHSSNIKLRIH--SIQAELRRLLKSKPYENCL 247
Query: 709 --LDKVW-PR-LRVLARSSPSDKYTLV----KGMIDSKISAGREVVAVTGDGTNDGPALK 760
L V + S L+ K + D +A +++ D +
Sbjct: 248 LVLLNVQNAKAWNAFNLSCK----ILLTTRFKQVTDFLSAATTTHISL--DHHSMTLTPD 301
Query: 761 KADVGFA--MGITGTDVAKEASDI----ILTDDNFSSIVKAVM---------WGRNVYDS 805
+ + D+ +E + SI+ + W D
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRL-------SIIAESIRDGLATWDNWKHVNCDK 354
Query: 806 ISKFLQFQLTVNVVAVIVAFIGACAV-QDS---PLKAVQMLWVNL-------IMDTLASL 854
++ ++ L V A +V S P + ++W ++ +++ L
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 855 ALATEMPT------PDLLLRKPYGRTKALISKTMMKNIIGQAIYQL 894
+L + P P + L + K + ++I+ Y +
Sbjct: 415 SLVEKQPKESTISIPSIYLEL---KVKLENEYALHRSIVDH--YNI 455
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 2e-08
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 170 VIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGEL 229
VIR + + V ++ VGDI ++ G+ +P DG++++ +DES ++GE V K +
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLKSK- 73
Query: 230 FDPMVLSGTHVMEGSGKMVVTAVG 253
V T G K+ T VG
Sbjct: 74 -GDEVFGATINNTGVLKIRATRVG 96
|
| >2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens} Length = 28 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 3e-07
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 1043 RAAHILWLRGLTRLQTQLRVIRAFKSN 1069
R ILW RGL R+QTQ++V++AF S+
Sbjct: 2 RRGQILWFRGLNRIQTQIKVVKAFHSS 28
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI---LEGKEFNRR 696
+ + E I IR + + ++ G D+ + LEG R
Sbjct: 60 LPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR 119
Query: 697 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDG 756
+ N+ + + WP + + S++ K + ++S + + + GD D
Sbjct: 120 IYCNHASFDNDYIHIDWP---HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDV 176
Query: 757 PALKKADVGFA 767
A K +D+ FA
Sbjct: 177 EAAKLSDLCFA 187
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 7e-06
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 177 KQIFVGDIVVGDICQIKYGDLLPADGILI--QSNDLKIDESSLTGESDHVKKGELFDPMV 234
+Q+ V + GDI ++ G P DG +I S +DES +TGE+ V K V
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSM---VDESLITGEAMPVAKKP--GSTV 89
Query: 235 LSGTHVMEGSGKMVVTAVG 253
++G+ GS + T VG
Sbjct: 90 IAGSINQNGSLLICATHVG 108
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 5e-04
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 744 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788
E++ + GD ND P + TD K SD + +D +
Sbjct: 171 EILVI-GDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFV-SDYS 212
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1119 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.88 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.9 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.86 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.78 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.67 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.34 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.16 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.13 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.1 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.05 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.99 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.97 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.97 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.96 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.95 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.94 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.89 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.89 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.88 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.87 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.85 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.83 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.78 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.77 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.76 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.75 | |
| 2kne_B | 28 | CAM, ATPase, Ca++ transporting, plasma membrane 4; | 98.75 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.67 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.65 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.6 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.56 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.56 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.52 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.51 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.49 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.45 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.43 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.42 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.37 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.35 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.33 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.33 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.25 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.24 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.2 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.19 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.18 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.17 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.13 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.07 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.06 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.04 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.0 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.93 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.93 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.92 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.89 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.86 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.83 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.81 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.81 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.8 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.78 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.77 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.76 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.76 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.75 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.74 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.73 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.71 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.65 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.65 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.64 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.6 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.59 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.56 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.54 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.54 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.53 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.5 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.5 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.49 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.48 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.46 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.45 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.42 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.39 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.38 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.37 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.36 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 97.34 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.3 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.29 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.29 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.25 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.2 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.15 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.15 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.13 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.1 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.0 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.98 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.94 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.8 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.8 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.71 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.56 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.52 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.52 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.42 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.41 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.39 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.32 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.07 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.73 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.62 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.38 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.3 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.11 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.11 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.0 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 94.57 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.26 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.2 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.0 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.87 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 93.58 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 93.5 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.19 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.09 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.05 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 90.74 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 88.45 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 85.01 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 84.25 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 83.07 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 82.12 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 81.75 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-134 Score=1303.46 Aligned_cols=897 Identities=25% Similarity=0.326 Sum_probs=737.5
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCC
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~ 115 (1119)
--++++++++|+||+.+||| ++|+++|+++||+|++++++++++|+.+++||.+++.++|+++|+++++.+.+.....
T Consensus 55 ~~~~~~~~~~l~~~~~~GLs--~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~ 132 (1034)
T 3ixz_A 55 QLSVAELEQKYQTSATKGLS--ASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG 132 (1034)
T ss_pred hCCHHHHHHHhCCCcccCCC--HHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence 35899999999999999999 9999999999999999999999999999999999999999999999987654321110
Q ss_pred CCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCC
Q psy10301 116 SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195 (1119)
Q Consensus 116 ~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~G 195 (1119)
+......|+++++|++.++++.+++.+++++.++..++|+++. +++++|+|||++++|+++||||||||.|++|
T Consensus 133 ----~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~--~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~G 206 (1034)
T 3ixz_A 133 ----DLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLV--PQQATVIRDGDKFQINADQLVVGDLVEMKGG 206 (1034)
T ss_pred ----CCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccC--CCeeEEEECCEEEEEEHHHCCCCcEEEEcCC
Confidence 0011234888999999999999999999999999999998875 5789999999999999999999999999999
Q ss_pred CeecccEEEEeeCceEEecccCCCCCcccccCCC--------CCccccccceeeecceEEEEEEecccchhhHHHHhhcC
Q psy10301 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGEL--------FDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267 (1119)
Q Consensus 196 d~vPaDgill~g~~l~VDES~LTGES~pv~K~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~ 267 (1119)
|.|||||+|++++++.||||+|||||.|+.|.++ ..|++|+||.|.+|+++++|++||.+|+.|+|..++..
T Consensus 207 d~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~ 286 (1034)
T 3ixz_A 207 DRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG 286 (1034)
T ss_pred ceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcc
Confidence 9999999999999999999999999999999763 35789999999999999999999999999999988764
Q ss_pred CchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe
Q psy10301 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKF 347 (1119)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~ 347 (1119)
.+ .+++|+|.++++++..+..+.++++++++++.+.
T Consensus 287 ~~-------------------------------------~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~------- 322 (1034)
T 3ixz_A 287 VE-------------------------------------NEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC------- 322 (1034)
T ss_pred cc-------------------------------------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 32 5689999999999988876655555444333211
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccc
Q psy10301 348 VIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 427 (1119)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT 427 (1119)
.+.+| ...++.++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||
T Consensus 323 --~~~~~--------~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT 392 (1034)
T 3ixz_A 323 --IGYTF--------LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLT 392 (1034)
T ss_pred --hcchH--------HHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcc
Confidence 11223 55677889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEEcCeEeecCCCCC------CCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHH
Q psy10301 428 TNRMTAVQAYVCEVQYKNIPKYE------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA 501 (1119)
Q Consensus 428 ~n~m~v~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~ 501 (1119)
+|+|+|.++++++..+....... +...+....+...+++|+...................|+|+|.|++.++..
T Consensus 393 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~ 472 (1034)
T 3ixz_A 393 QNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSEL 472 (1034)
T ss_pred cCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHH
Confidence 99999999999877654321110 111223334555555555432110000001112356899999999999998
Q ss_pred cCCChhhhhhcCCccceeeeecCCCCcceEEEEEec----CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHH
Q psy10301 502 IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 577 (1119)
Q Consensus 502 ~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~----~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~ 577 (1119)
.+.+....+..++ .+..+||+|.||+|++++.. ++++++|+|||||.|+++|+.+.. +|...+++++.++.+
T Consensus 473 ~~~~~~~~~~~~~---~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~ 548 (1034)
T 3ixz_A 473 TLGNAMGYRERFP---KVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAF 548 (1034)
T ss_pred hCCChHHHHHhCc---ceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHH
Confidence 8777666665544 46889999999999998865 267999999999999999998774 677788988877765
Q ss_pred HHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCE
Q psy10301 578 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGIT 657 (1119)
Q Consensus 578 ~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~ 657 (1119)
++..+.|+.+|+|||++|||.++.++...+. ..+.+..+.+|+||+|+|+++++||+||+++++|++|+++||+
T Consensus 549 -~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~-----~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~ 622 (1034)
T 3ixz_A 549 -QTAYLSLGGLGERVLGFCQLYLSEKDYPPGY-----AFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIR 622 (1034)
T ss_pred -HHHHHHHHhcCcHhheEeEEecChhhccccc-----ccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCe
Confidence 5678999999999999999998764322110 0111223346899999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCcCCCCc----------------------eEEEecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 658 IRMVTGDNINTARSIATKCGIVKPGED----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 658 v~m~TGD~~~ta~~ia~~~Gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
|+|+|||+..||.++|++|||..++.. ..+++|.++..+ .++.+.+...+
T Consensus 623 vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--------~~~~l~~~~~~ 694 (1034)
T 3ixz_A 623 VIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM--------DPSELVEALRT 694 (1034)
T ss_pred EEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC--------CHHHHHHHHHh
Confidence 999999999999999999999754321 235566665432 23334444333
Q ss_pred e--EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 716 L--RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 716 ~--~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
. .+|||++|+||.++|+.+ +..|++|+|+|||.||+|||++||+|||||++|++++|++||+++.+|+|.+|+
T Consensus 695 ~~~~v~ar~~P~~K~~iv~~l-----q~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~ 769 (1034)
T 3ixz_A 695 HPEMVFARTSPQQKLVIVESC-----QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIV 769 (1034)
T ss_pred CCceEEEecCHHHHHHHHHHH-----HHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHH
Confidence 2 599999999999999997 456899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCC
Q psy10301 794 KAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873 (1119)
Q Consensus 794 ~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~ 873 (1119)
++|++||++|+||+|+++|++++|+.++++.+++.+++.++||+++|+||+|+++|++|+++|++|||++++|+|||+++
T Consensus 770 ~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~ 849 (1034)
T 3ixz_A 770 TGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNP 849 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCC
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999987
Q ss_pred -CCCcccHHHHHHHHH-HHHHHHHHHHHHHHHhhcc--------CCCCCCCC----CC--------CC-----CCCcchh
Q psy10301 874 -TKALISKTMMKNIIG-QAIYQLVIIFGILFFGDKL--------LDIPTGRG----AE--------YG-----SLPTQHF 926 (1119)
Q Consensus 874 -~~~li~~~~~~~i~~-~~i~~~~~~~~~~~~~~~~--------~~~~~~~~----~~--------~~-----~~~~~~~ 926 (1119)
+++++++.++..+++ .+++++++.|+.+|+.... +++...+. .+ +. .....++
T Consensus 850 ~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1034)
T 3ixz_A 850 KRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCY 929 (1034)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHH
Confidence 689999998877654 4777777666666543211 11100000 00 00 0012368
Q ss_pred hhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHHHHHHhhc--cccceecccChhhHHHHHHHHH
Q psy10301 927 TIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSLTLEQWGWCLFFGV 1003 (1119)
Q Consensus 927 t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l~~~~w~~~~~~~~ 1003 (1119)
|++|+++|++|+||.+++|+.+ .++|+ ++|+|+++++++++.+++|+++++++ +.+|++.|+++.+|++++++++
T Consensus 930 t~~f~~lv~~q~~~~~~~r~~~--~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1007 (1034)
T 3ixz_A 930 TVFFISIEMCQIADVLIRKTRR--LSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGL 1007 (1034)
T ss_pred HHHHHHHHHHHHHHHHhhccCC--CcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999865 47786 78999999999999999999988876 5899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCc
Q psy10301 1004 GTLVWQQIVTTVPTKR 1019 (1119)
Q Consensus 1004 ~~l~~~~~vk~i~~~~ 1019 (1119)
+.++++|+.|++.+++
T Consensus 1008 ~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 1008 LIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999886644
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-132 Score=1287.75 Aligned_cols=895 Identities=26% Similarity=0.346 Sum_probs=734.1
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCC
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~ 115 (1119)
..++++++++|+||+.+||| ++|+++|+++||+|++++++++++|++++++|++++.++|++++++|++++.+.....
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs--~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLT--NARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBC--HHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 36799999999999999999 9999999999999999999999999999999999999999999999998765421100
Q ss_pred CCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCC
Q psy10301 116 SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195 (1119)
Q Consensus 116 ~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~G 195 (1119)
+......|+++++|+++++++.+++.+++++.++..++|+++. +.+++|+|||++++|+++||||||||.|++|
T Consensus 128 ----~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~--~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~G 201 (1028)
T 2zxe_A 128 ----DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMV--PQQALVIRDGEKSTINAEFVVAGDLVEVKGG 201 (1028)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTS--CSEEEEEETTEEEEEEGGGCCTTCEEEEETT
T ss_pred ----cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeeEEEECCEEEEEEHHHCCcCCEEEECCC
Confidence 0011245889999999899999999999999999999998764 5789999999999999999999999999999
Q ss_pred CeecccEEEEeeCceEEecccCCCCCcccccCCCC--------CccccccceeeecceEEEEEEecccchhhHHHHhhcC
Q psy10301 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGELF--------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267 (1119)
Q Consensus 196 d~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~ 267 (1119)
|.|||||+|++|+++.||||+|||||.|+.|.++. .|++|+||.+.+|+++++|++||.+|..|+|..++..
T Consensus 202 d~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 281 (1028)
T 2zxe_A 202 DRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG 281 (1028)
T ss_dssp CBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHH
T ss_pred CEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccC
Confidence 99999999999988999999999999999998642 3579999999999999999999999999999988754
Q ss_pred CchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe
Q psy10301 268 TDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKF 347 (1119)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~ 347 (1119)
+ +.++||+|+.+++++..+..+.++++++++++.+.
T Consensus 282 ~-------------------------------------~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~------- 317 (1028)
T 2zxe_A 282 L-------------------------------------EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI------- 317 (1028)
T ss_dssp S-------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred C-------------------------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3 25789999999999988877766665554443211
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccc
Q psy10301 348 VIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT 427 (1119)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT 427 (1119)
.+.+| ...+..++++++++||||||+++++++++++++|+++|++||+++++|+||++|+||||||||||
T Consensus 318 --~~~~~--------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT 387 (1028)
T 2zxe_A 318 --LGYSW--------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387 (1028)
T ss_dssp --TTCCH--------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCB
T ss_pred --ccCcH--------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCC
Confidence 12234 34566778899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEEcCeEeecCCCCC------CCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHH
Q psy10301 428 TNRMTAVQAYVCEVQYKNIPKYE------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA 501 (1119)
Q Consensus 428 ~n~m~v~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~ 501 (1119)
+|+|+|+++++++..|....... +...+..+.+....++|+.........+.+.......|||+|.|++.++..
T Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~ 467 (1028)
T 2zxe_A 388 QNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIEL 467 (1028)
T ss_dssp CSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHH
Confidence 99999999999887664321110 011223344555556655432100000000011245799999999999988
Q ss_pred cCCChhhhhhcCCccceeeeecCCCCcceEEEEEec----CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHH
Q psy10301 502 IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 577 (1119)
Q Consensus 502 ~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~----~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~ 577 (1119)
.+.+....+..+ ..++.+||+|.||||+++++. ++++++|+|||||.|+++|+.+.. +|...+++++.++++
T Consensus 468 ~~~~~~~~~~~~---~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~~ 543 (1028)
T 2zxe_A 468 CCGSVQGMRDRN---PKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEAF 543 (1028)
T ss_dssp HHSCHHHHHHHS---CEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHHH
T ss_pred hCCCHHHHHHhC---ceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHHH
Confidence 755555555443 457889999999999999986 467899999999999999998654 677788888777665
Q ss_pred HHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCE
Q psy10301 578 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGIT 657 (1119)
Q Consensus 578 ~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~ 657 (1119)
.+.++.|+++|+|||++|||+++.+++..+. ..+.+..+.+|+|++|+|+++++||+||+++++|++|+++||+
T Consensus 544 -~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~-----~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~ 617 (1028)
T 2zxe_A 544 -QNAYLELGGLGERVLGFCHFALPEDKYNEGY-----PFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIK 617 (1028)
T ss_dssp -HHHHHHHHHTTCEEEEEEEEECCSTTSCTTC-----CCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCE
T ss_pred -HHHHHHHHhcCCEEEEEEEEecCcccccccc-----ccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCE
Confidence 5678999999999999999998754321110 0011122345789999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCcCCCCc----------------------eEEEecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 658 IRMVTGDNINTARSIATKCGIVKPGED----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 658 v~m~TGD~~~ta~~ia~~~Gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
|+|+|||+..||.+||++|||..++.. ..+++|.++..+ .++.++++..+
T Consensus 618 v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~--------~~~~l~~~~~~ 689 (1028)
T 2zxe_A 618 VIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL--------STEVLDDILHY 689 (1028)
T ss_dssp EEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC--------CHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC--------CHHHHHHHHhh
Confidence 999999999999999999999754321 356777776543 23444444444
Q ss_pred e--EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 716 L--RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 716 ~--~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
. .+|||++|+||..+|+.++ +.|++|+|+|||.||+|||++||||||||++|+++||++||+++.+|+|++|+
T Consensus 690 ~~~~v~ar~~P~~K~~iV~~lq-----~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~ 764 (1028)
T 2zxe_A 690 HTEIVFARTSPQQKLIIVEGCQ-----RQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIV 764 (1028)
T ss_dssp CSEEEEESCCHHHHHHHHHHHH-----HTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHH
T ss_pred CCcEEEEEcCHHHHHHHHHHHH-----hCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHH
Confidence 3 4999999999999999985 35789999999999999999999999999889999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCC
Q psy10301 794 KAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 873 (1119)
Q Consensus 794 ~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~ 873 (1119)
+++++||++|+||++++.|++++|+.+++..+++.++..++|++++|++|+|+++|.+|+++|++|+|++++|+|+|+.+
T Consensus 765 ~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~ 844 (1028)
T 2zxe_A 765 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNP 844 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCc
Confidence 99999999999999999999999999999999888888899999999999999999999999999999999999999986
Q ss_pred CC-CcccHHHHHH-HHHHHHHHHHHHHHHHHHhhccCCC---------------CCC-----CCCCCCC-----CCcchh
Q psy10301 874 TK-ALISKTMMKN-IIGQAIYQLVIIFGILFFGDKLLDI---------------PTG-----RGAEYGS-----LPTQHF 926 (1119)
Q Consensus 874 ~~-~li~~~~~~~-i~~~~i~~~~~~~~~~~~~~~~~~~---------------~~~-----~~~~~~~-----~~~~~~ 926 (1119)
++ +++++.++.. ++..+++++++.|+.+++....++. ..+ .+..+.. ...+++
T Consensus 845 ~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1028)
T 2zxe_A 845 KTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCH 924 (1028)
T ss_dssp TTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHH
Confidence 66 9999998877 4566888888777665542211111 000 0000000 012578
Q ss_pred hhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhc--cccceecccChhhHHHHHHHHHH
Q psy10301 927 TIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSLTLEQWGWCLFFGVG 1004 (1119)
Q Consensus 927 t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l~~~~w~~~~~~~~~ 1004 (1119)
|++|++||++|+||.+++|+.+ .++|+..++|+++++++++++++|++++++| +.+|++.|+++.+|++++++++.
T Consensus 925 T~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~ 1002 (1028)
T 2zxe_A 925 TSFFISIVVVQWADLIICKTRR--NSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLI 1002 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSS--SCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCC--cchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999854 4678755999999999999999999999876 58999999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q psy10301 1005 TLVWQQIVTTVPT 1017 (1119)
Q Consensus 1005 ~l~~~~~vk~i~~ 1017 (1119)
.++++++.|++.+
T Consensus 1003 ~~~~~e~~k~~~r 1015 (1028)
T 2zxe_A 1003 IFLYDEMRRFIIR 1015 (1028)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997644
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-130 Score=1267.85 Aligned_cols=900 Identities=29% Similarity=0.425 Sum_probs=731.1
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
.++++++++|+||+.+||| ++|+++|+++||+|++++++++++|+++++||+++++++|++++++|++++++.+.
T Consensus 8 ~~~~~~~~~l~~~~~~GLs--~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~--- 82 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG--- 82 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBC--HHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS---
T ss_pred CCHHHHHHHhCCCcccCCC--HHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---
Confidence 5789999999999999999 99999999999999999999999999999999999999999999999998765310
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCE--EEEEEcCCcccCcEEEEcC
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNE--LKQIFVGDIVVGDICQIKY 194 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~--~~~I~~~dLvvGDIV~l~~ 194 (1119)
.++...|+++++|+++++++.+++.+++++.++..++|+++. +.+++|+|||+ .++|+++||||||||.|++
T Consensus 83 ----~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~--~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~ 156 (995)
T 3ar4_A 83 ----EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYE--PEMGKVYRADRKSVQRIKARDIVPGDIVEVAV 156 (995)
T ss_dssp ----SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGS--CSEEEEEBTTCSSCEEEEGGGCCTTCEEEEET
T ss_pred ----ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccC--CCeEEEEeCCCceEEEEEHHHCCCCCEEEECC
Confidence 112346999999999988889999999999999999998764 57899999987 6999999999999999999
Q ss_pred CCeecccEEEEe--eCceEEecccCCCCCcccccCCCC-----------CccccccceeeecceEEEEEEecccchhhHH
Q psy10301 195 GDLLPADGILIQ--SNDLKIDESSLTGESDHVKKGELF-----------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGII 261 (1119)
Q Consensus 195 Gd~vPaDgill~--g~~l~VDES~LTGES~pv~K~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i 261 (1119)
||.|||||+|++ ++++.||||+|||||.|+.|.++. ++++|+||.+.+|+++++|++||.+|..|+|
T Consensus 157 Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i 236 (995)
T 3ar4_A 157 GDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKI 236 (995)
T ss_dssp TCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHH
T ss_pred CCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHH
Confidence 999999999964 567999999999999999998742 3799999999999999999999999999999
Q ss_pred HHhhcCCchhhHHHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10301 262 FTLLGATDDEEVKQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQ 341 (1119)
Q Consensus 262 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~ 341 (1119)
..++..++ .++||+|+++++++..+..+.++++++++++....
T Consensus 237 ~~~~~~~~-------------------------------------~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (995)
T 3ar4_A 237 RDQMAATE-------------------------------------QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH 279 (995)
T ss_dssp HHHHHTCC-------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred HHHhhcCC-------------------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98886542 56899999999999988776555544433221110
Q ss_pred hhhhheeeccchhHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeC
Q psy10301 342 YCVKKFVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSD 421 (1119)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~D 421 (1119)
+ .....+.+| ...+..+|..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||
T Consensus 280 ~---~~~~~~~~~----~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~D 352 (995)
T 3ar4_A 280 F---NDPVHGGSW----IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 352 (995)
T ss_dssp G---GSCSSSSCH----HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEE
T ss_pred h---ccccccchH----HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEec
Confidence 1 000112234 223455677899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCeEEEEEEEcCeEee---------c-----CCCCC---------CCChHHHHHHHHHHHhccCCccccccCC
Q psy10301 422 KTGTLTTNRMTAVQAYVCEVQYK---------N-----IPKYE---------DIPEDIASKIVEGISVNSGYTSKIMAPE 478 (1119)
Q Consensus 422 KTGTLT~n~m~v~~~~~~~~~~~---------~-----~~~~~---------~~~~~~~~~l~~~i~~~~~~~s~~~~~~ 478 (1119)
||||||+|+|+|.+++..+..+. . .|... ....+....+....++|+.... ...
T Consensus 353 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~---~~~ 429 (995)
T 3ar4_A 353 KTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL---DFN 429 (995)
T ss_dssp STTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEE---EEE
T ss_pred CCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcc---ccc
Confidence 99999999999999987643211 0 01100 0011223344555555554321 101
Q ss_pred CCCCCcccccChhHHHHHHHHHHcCC-Ch--hhhh----------hcCCccceeeeecCCCCcceEEEEEec-CC-----
Q psy10301 479 NANELPKQVGNKTECALLGFVVAIGK-NY--QTVR----------DDLPEEVFTRVYTFNSVRKSMSTVIPK-KN----- 539 (1119)
Q Consensus 479 ~~~~~~~~~g~~~E~ALl~~~~~~g~-~~--~~~~----------~~~~~~~i~~~~~F~s~rk~msvvv~~-~~----- 539 (1119)
..++.....|+|+|.|++.++.+.|. +. ..+. .....++.++.+||+|+|||||++++. +|
T Consensus 430 ~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~ 509 (995)
T 3ar4_A 430 ETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV 509 (995)
T ss_dssp TTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSC
T ss_pred CCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCcccc
Confidence 11222345699999999999988775 11 0000 001124578899999999999999986 44
Q ss_pred eeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHH--hhccCceEEEEEeecccchhhhhccccCCCCC
Q psy10301 540 GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPM--ACDGLRTISIAYKDFVTDKAEINQVHIEGDPN 617 (1119)
Q Consensus 540 ~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~ 617 (1119)
++++|+|||||.|+++|+.+.. ++...+++++.++++ .+.++.| +++|+||||+|||+++..+... ...+
T Consensus 510 ~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~-~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~------~~~~ 581 (995)
T 3ar4_A 510 GNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKI-LSVIKEWGTGRDTLRCLALATRDTPPKREEM------VLDD 581 (995)
T ss_dssp CCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH-HHHHHHHHHSTTCCEEEEEEEESSCCCGGGC------CTTC
T ss_pred ceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHH-HHHHHHHHhhhccceEEEEEEEecCcccccc------cccc
Confidence 5899999999999999988765 346678888777765 4567889 9999999999999986432110 0011
Q ss_pred CCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCc--eEEEecHhHHH
Q psy10301 618 WDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEGKEFNR 695 (1119)
Q Consensus 618 ~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~--~i~l~g~~~~~ 695 (1119)
....+.+|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.++|++|||...+.+ -.+++|.++..
T Consensus 582 ~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~ 661 (995)
T 3ar4_A 582 SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD 661 (995)
T ss_dssp GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHT
T ss_pred chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhh
Confidence 1234567899999999999999999999999999999999999999999999999999999765432 24678888764
Q ss_pred HhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHH
Q psy10301 696 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 775 (1119)
Q Consensus 696 ~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ 775 (1119)
+ .++.+.++..+..+|||++|+||.++|+.++ ..|++|+|+|||.||+|||++|||||||| +|+++
T Consensus 662 l--------~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~-----~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ 727 (995)
T 3ar4_A 662 L--------PLAEQREACRRACCFARVEPSHKSKIVEYLQ-----SYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 727 (995)
T ss_dssp S--------CHHHHHHHHHHCCEEESCCSSHHHHHHHHHH-----TTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHH
T ss_pred C--------CHHHHHHHHhhCcEEEEeCHHHHHHHHHHHH-----HCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHH
Confidence 3 2344555556678999999999999999984 45899999999999999999999999999 99999
Q ss_pred HHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCChhHHHHHHHHHHHhHHHHhH
Q psy10301 776 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 855 (1119)
Q Consensus 776 ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~spL~~~q~L~~nli~d~l~~la 855 (1119)
|+++||+++.+|+|.+|+++++|||++|+||+|++.|++++|+..+++.|++++++.++||+++|+||+|+++|++|+++
T Consensus 728 ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~ 807 (995)
T 3ar4_A 728 AKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATA 807 (995)
T ss_dssp HHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHH
T ss_pred HHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888889999999999999999999999
Q ss_pred hccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----CC----------CCCCCCCC--
Q psy10301 856 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLD----IP----------TGRGAEYG-- 919 (1119)
Q Consensus 856 L~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~-- 919 (1119)
|+.++|++++|+|||+.+++++++++++.+++.+++++++++|+.+++...... .. .+....+.
T Consensus 808 l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (995)
T 3ar4_A 808 LGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 887 (995)
T ss_dssp HTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCS
T ss_pred hccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccc
Confidence 999999999999999999999999999999999999998777654432111000 00 00000110
Q ss_pred ----CCCcchhhhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHHHHHHhhc--cccceecccCh
Q psy10301 920 ----SLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQVIIVQYG--GIAFATHSLTL 992 (1119)
Q Consensus 920 ----~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~f~~~~l~~ 992 (1119)
.....++|++|+++|++|+||.+|+|+.++ ++|. ++|+|+++++++++.+++|+++++++ +.+|++.|+++
T Consensus 888 ~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~--~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~ 965 (995)
T 3ar4_A 888 DCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ--SLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDL 965 (995)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSC--CTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCH
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHhhcccc--chhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH
Confidence 012247899999999999999999998654 4454 78999999999999999998887765 68899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10301 993 EQWGWCLFFGVGTLVWQQIVTTVPTK 1018 (1119)
Q Consensus 993 ~~w~~~~~~~~~~l~~~~~vk~i~~~ 1018 (1119)
.+|++++++++..+++++++|++.++
T Consensus 966 ~~w~~~~~~~~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 966 TQWLMVLKISLPVIGLDEILKFIARN 991 (995)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999988654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-121 Score=1154.23 Aligned_cols=807 Identities=20% Similarity=0.289 Sum_probs=646.8
Q ss_pred hCCHHH-HHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCC
Q psy10301 36 YGGVPE-ICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGG 114 (1119)
Q Consensus 36 ~~~~~~-l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~ 114 (1119)
+|++++ +++.|++++.+||+ ++|+++|+++||+|++++++ .++|..++++|.+++.++|+++++++++++.
T Consensus 69 ~~~~~~~~~~~l~t~~~~GLs--~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~----- 140 (920)
T 1mhs_A 69 PGGGRVVPEDMLQTDTRVGLT--SEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLED----- 140 (920)
T ss_dssp HHHHSCCSSTTTTTCCCCCCC--SHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCSC-----
T ss_pred cCccchhHHHHhCCCcCCCCC--HHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 355544 56779999999999 89999999999999999765 5778889999999999999999999877642
Q ss_pred CCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcC
Q psy10301 115 ESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKY 194 (1119)
Q Consensus 115 ~~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~ 194 (1119)
|.++++|++.++++.+++.+++|+.++..++|+++. +.+++|+|||++++|+++||||||||.|++
T Consensus 141 ------------~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~--~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~ 206 (920)
T 1mhs_A 141 ------------WVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTL--ALKAVVLRDGTLKEIEAPEVVPGDILQVEE 206 (920)
T ss_dssp ------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC--CSSCEEECSSSEEECCTTTSCTTSEEEECT
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEECCEEEEEEHHHcCCCCEEEeCC
Confidence 788888888888889999999999999999998764 467899999999999999999999999999
Q ss_pred CCeecccEEEEeeCc-eEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhH
Q psy10301 195 GDLLPADGILIQSND-LKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEV 273 (1119)
Q Consensus 195 Gd~vPaDgill~g~~-l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~ 273 (1119)
||.|||||+|++|++ +.||||+|||||.|+.|.+ ++++|+||.+.+|+++++|++||.+|..|+|..++..++
T Consensus 207 Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~--gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~---- 280 (920)
T 1mhs_A 207 GTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHK--GDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAAS---- 280 (920)
T ss_dssp TCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCS--SCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCC----
T ss_pred CCccccceEEEecCceeeeeccccCCCCcceEecC--CCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcc----
Confidence 999999999999995 8999999999999999987 578999999999999999999999999999988876542
Q ss_pred HHhhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccch
Q psy10301 274 KQEKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEE 353 (1119)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~ 353 (1119)
.+++|+|+.+++++..+..+.+++++ ++++.+ . ..+.+
T Consensus 281 ---------------------------------~~~~~l~~~~~~i~~~l~~~~~~~~~---i~~~~~----~--~~~~~ 318 (920)
T 1mhs_A 281 ---------------------------------GGSGHFTEVLNGIGTILLILVIFTLL---IVWVSS----F--YRSNP 318 (920)
T ss_dssp ---------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHTT----T--TTTCC
T ss_pred ---------------------------------cCCchHHHHHHHHHHHHHHHHHHHHH---HHHHHH----H--hcCCc
Confidence 46799999999988765443322221 111111 1 11223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEE
Q psy10301 354 WKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTA 433 (1119)
Q Consensus 354 ~~~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v 433 (1119)
| ...|..++++++++||||||+++|+++++++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|
T Consensus 319 ~--------~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v 390 (920)
T 1mhs_A 319 I--------VQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL 390 (920)
T ss_dssp H--------HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCC
T ss_pred H--------HHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeE
Confidence 3 45677789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcC
Q psy10301 434 VQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDL 513 (1119)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~ 513 (1119)
.+++..+. .+++ +++ ...++|+... . ..++|+|.|++.++.+.+... ...
T Consensus 391 ~~~~~~~g----------~~~~--~ll-~~a~l~~~~~-------~------~~~~P~e~Al~~~~~~~~~~~----~~~ 440 (920)
T 1mhs_A 391 HDPYTVAG----------VDPE--DLM-LTACLAASRK-------K------KGIDAIDKAFLKSLKYYPRAK----SVL 440 (920)
T ss_dssp CCCBCCSC----------CCCT--HHH-HHHHHSCCCS-------S------CSCCSHHHHHHHHHHHSSSCC----GGG
T ss_pred EEEeecCC----------CCHH--HHH-HHHHHhcCCc-------c------cCCChHHHHHHHHHHhcccch----hhc
Confidence 98765321 0111 122 2233332211 0 014999999999887655321 112
Q ss_pred CccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCce
Q psy10301 514 PEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRT 592 (1119)
Q Consensus 514 ~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRt 592 (1119)
..+++.+.+||+|.||+|+++++. +|+.++|+|||||.|+++|+. ..+++++.++.+ .+.++.|+++|+||
T Consensus 441 ~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~-~~~~~~~a~~G~Rv 512 (920)
T 1mhs_A 441 SKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAY-KNKVAEFATRGFRS 512 (920)
T ss_dssp SCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHH-HHHHHHHHTSSCCC
T ss_pred cccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHH-HHHHHHHHhCCCEE
Confidence 335677899999999999999986 677889999999999999974 124556555554 56789999999999
Q ss_pred EEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy10301 593 ISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSI 672 (1119)
Q Consensus 593 l~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~i 672 (1119)
+++|||.. |++++|+|+++++||+|||++++|++|+++||+|+|+||||..||.+|
T Consensus 513 L~vA~~~~------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aI 568 (920)
T 1mhs_A 513 LGVARKRG------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARET 568 (920)
T ss_dssp CEECCCSS------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHH
T ss_pred EEEEEecc------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHH
Confidence 99998731 357899999999999999999999999999999999999999999999
Q ss_pred HHHcCCcCCC--CceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEc
Q psy10301 673 ATKCGIVKPG--EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 750 (1119)
Q Consensus 673 a~~~Gi~~~~--~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iG 750 (1119)
|+++||.... .+.++++|. ..++++++.+...+..||||++|+||.++|+.++ ..|++|+|+|
T Consensus 569 A~~lGI~~~~~~~~~~~~~g~----------~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq-----~~g~~Vam~G 633 (920)
T 1mhs_A 569 SRQLGLGTNIYNAERLGLGGG----------GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQ-----QRGYLVAMTG 633 (920)
T ss_dssp HHHHTSSCSCCCSSSSSSCBC----------CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHH-----TTTCCCEECC
T ss_pred HHHcCCCccccCccceeecCc----------ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHH-----hCCCeEEEEc
Confidence 9999996321 111223333 1234455667777888999999999999999984 4589999999
Q ss_pred CCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhc
Q psy10301 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACA 830 (1119)
Q Consensus 751 DG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~ 830 (1119)
||.||+||||+|||||||| +|+++||++||+++++|+|++|++++++||++|+||+|++.|+++.|+...++.++.+.+
T Consensus 634 DGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~ 712 (920)
T 1mhs_A 634 DGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAI 712 (920)
T ss_dssp CCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999864443333333
Q ss_pred cCCCChhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy10301 831 VQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDI 910 (1119)
Q Consensus 831 ~~~spL~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~ 910 (1119)
.+ .||++.|++|+|+++|. |+++|++++++.+ ++|+.++.+ .++..++..+++.++..|+.+++... ++.
T Consensus 713 ~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 782 (920)
T 1mhs_A 713 LN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYA-QGE 782 (920)
T ss_dssp CS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTT-TTT
T ss_pred Hh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 32 34899999999999997 8999999998765 667655432 23333344555555544444333211 111
Q ss_pred CCCCCCCCCCCCcchhhhhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhccccceeccc
Q psy10301 911 PTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSL 990 (1119)
Q Consensus 911 ~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l 990 (1119)
..+ +.......+|++|++++++|+|+.+++|+.+ ++|++. .|+++++++++..++++++.+++ +|.+.|+
T Consensus 783 ~~~----~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~f~~~~l 852 (920)
T 1mhs_A 783 NGG----IVQNFGNMDEVLFLQISLTENWLIFITRANG---PFWSSI-PSWQLSGAIFLVDILATCFTIWG--WFEHSDT 852 (920)
T ss_dssp TCC----SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS---SCSCCS-CTHHHHHHHHHHHHHHHHHHSSS--STTSCSH
T ss_pred ccc----ccchhhHHHHHHHHHHHHHHHHHHHHhccch---hhhcCc-hHHHHHHHHHHHHHHHHHHHHhh--hhccCCC
Confidence 111 0111235789999999999999999999854 366654 88888888888888888877765 8999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10301 991 TLEQWGWCLFFGVGTLVWQQIVTTVPTK 1018 (1119)
Q Consensus 991 ~~~~w~~~~~~~~~~l~~~~~vk~i~~~ 1018 (1119)
++.+|+++++++++.+++.++.|++-.+
T Consensus 853 ~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 880 (920)
T 1mhs_A 853 SIVAVVRIWIFSFGIFCIMGGVYYILQD 880 (920)
T ss_dssp HHHTHHHHHHHTTHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999976544
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-117 Score=1121.24 Aligned_cols=827 Identities=21% Similarity=0.316 Sum_probs=625.9
Q ss_pred CCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCCC
Q psy10301 37 GGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116 (1119)
Q Consensus 37 ~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~~ 116 (1119)
-+.+++++.|+++ .+||| ++|+++|+++||+|++++++ +++|+.++++|.+++.++|+++++++++++....
T Consensus 17 ~~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~---- 88 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLT--TQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDG---- 88 (885)
T ss_dssp SSTTCCTTTSSSC-SSCST--HHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTT----
T ss_pred CCHHHHHHHhCCC-CCCCC--HHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence 4788999999998 68999 99999999999999999887 6777888899999999999999999998864321
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCC
Q psy10301 117 EHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGD 196 (1119)
Q Consensus 117 ~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd 196 (1119)
....|.++++|++.++++.+++.+++++.++..++|.++. +.+++|+|||++++|+++||||||||.|++||
T Consensus 89 ------~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~--~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd 160 (885)
T 3b8c_A 89 ------RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGL--APKTKVLRDGKWSEQEAAILVPGDIVSIKLGD 160 (885)
T ss_dssp ------SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSC--SCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSC
T ss_pred ------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCeEEEEECCEEEEEEHHHCCCCCEEEECCCC
Confidence 1224899988888777777888899999988888887764 56789999999999999999999999999999
Q ss_pred eecccEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHh
Q psy10301 197 LLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQE 276 (1119)
Q Consensus 197 ~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~ 276 (1119)
.|||||+|++|++++||||+|||||.|+.|.+ ++++|+||.+.+|+++++|++||.+|..|+|.+++..
T Consensus 161 ~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~--g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~--------- 229 (885)
T 3b8c_A 161 IIPADARLLEGDPLKVDQSALTGESLPVTKHP--GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS--------- 229 (885)
T ss_dssp CCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSS--CCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS---------
T ss_pred EEeeceEEEEcCcccccccccCCCCcceEecC--CCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc---------
Confidence 99999999999988999999999999999987 5789999999999999999999999999999877653
Q ss_pred hhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHH
Q psy10301 277 KKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA 356 (1119)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~ 356 (1119)
..+++|+|+.+++++.++... +++ .+++++ +.. +...+.+|
T Consensus 230 -----------------------------~~~~~~lq~~~~~i~~~~~~~---~~~-~~~~~~--~~~--~~~~~~~~-- 270 (885)
T 3b8c_A 230 -----------------------------TNQVGHFQKVLTAIGNFCICS---IAI-GMVIEI--IVM--YPIQRRKY-- 270 (885)
T ss_dssp -----------------------------CSCCSTTTTTTHHHHHHHHHH---HHH-HHHHHS--TTT--TTTTCSCS--
T ss_pred -----------------------------ccccChHHHHHHHHHHHHHHH---HHH-HHHHHH--HHH--HHHccCcH--
Confidence 146789999999887652111 111 011110 111 11112233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEE
Q psy10301 357 IYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQA 436 (1119)
Q Consensus 357 ~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~ 436 (1119)
...+..++++++++||||||+++++++++++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+.
T Consensus 271 ------~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 344 (885)
T 3b8c_A 271 ------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 344 (885)
T ss_dssp ------TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSC
T ss_pred ------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEE
Confidence 23466788999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred EEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCcc
Q psy10301 437 YVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEE 516 (1119)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~ 516 (1119)
++. .+. ...+++ +.+ ...++|+.. ..++|+|.|++.++.+ ....+ ..+
T Consensus 345 ~~~--~~~-----~~~~~~--~ll-~~aa~~~~~---------------~~~~p~~~Al~~~~~~----~~~~~---~~~ 392 (885)
T 3b8c_A 345 LVE--VFC-----KGVEKD--QVL-LFAAMASRV---------------ENQDAIDAAMVGMLAD----PKEAR---AGI 392 (885)
T ss_dssp CCC--SSC-----SSTTHH--HHH-HHHHHHCCS---------------SSCCSHHHHHHHTTCC----TTCCC---CSS
T ss_pred EEe--ccC-----CCCCHH--HHH-HHHHHHhCC---------------CCCCchHHHHHHHhhc----hhhHh---hcC
Confidence 210 000 011221 222 222333321 1368999999987532 11111 123
Q ss_pred ceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEE
Q psy10301 517 VFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISI 595 (1119)
Q Consensus 517 ~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~l 595 (1119)
+.++.+||+|.||+|+++++. +|++++|+|||||.++++|+.. ++.+++ +++.++.|+++|+||+++
T Consensus 393 ~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-----------~~~~~~-~~~~~~~~a~~G~rvl~v 460 (885)
T 3b8c_A 393 REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-----------NDLSKK-VLSIIDKYAERGLRSLAV 460 (885)
T ss_dssp CCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-----------STTTTT-HHHHHHHHTTTTCEEEEE
T ss_pred ceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-----------hhhHHH-HHHHHHHHHhCCCeEEEE
Confidence 456789999999999999886 7778899999999999999731 001111 345678999999999999
Q ss_pred EEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy10301 596 AYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 675 (1119)
Q Consensus 596 Ayr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~ 675 (1119)
|||+++.++ .+..|+|++|+|+++++||+|||++++|++|+++||+|+|+|||+..||.+||++
T Consensus 461 A~~~~~~~~----------------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~ 524 (885)
T 3b8c_A 461 ARQVVPEKT----------------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 524 (885)
T ss_dssp CCBCCCSSS----------------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT
T ss_pred EEecccccc----------------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH
Confidence 999875421 2345789999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCC
Q psy10301 676 CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND 755 (1119)
Q Consensus 676 ~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND 755 (1119)
+||..+..+.-.++|.+++.. +.++.++++..+..||||++|+||.++|+.+++ .|++|+|+|||.||
T Consensus 525 lGi~~~~~~~~~l~g~~~~~~-------~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~-----~g~~Vam~GDGvND 592 (885)
T 3b8c_A 525 LGMGTNMYPSSALLGTHKDAN-------LASIPVEELIEKADGFAGVFPEHKYEIVKKLQE-----RKHIVGMTGDGVND 592 (885)
T ss_dssp TTCTTCCSTTSSCCBGGGGTT-------SCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHH-----TTCCCCBCCCSSTT
T ss_pred hCCccccCCcceeeccccccc-------cchhHHHHHHhhCcEEEEECHHHHHHHHHHHHH-----CCCeEEEEcCCchh
Confidence 999542101113456554431 112223444556689999999999999999853 57899999999999
Q ss_pred HHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCC
Q psy10301 756 GPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP 835 (1119)
Q Consensus 756 ~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~sp 835 (1119)
+||||+|||||||| +|+++||++||+++.+|+|++|++++++||++|+||++++.|++++|+..++..+...+ ..+.|
T Consensus 593 apaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~-~~~~~ 670 (885)
T 3b8c_A 593 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL-IWEFD 670 (885)
T ss_dssp HHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS-SCSSC
T ss_pred HHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcC
Confidence 99999999999999 89999999999999999999999999999999999999999999999875544443333 45678
Q ss_pred hhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q psy10301 836 LKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRG 915 (1119)
Q Consensus 836 L~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1119)
|+++|++|+|+++|..+ ++++++++.+. ++| +...+ +.++..++..+++++++.+++++++......+...+
T Consensus 671 l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (885)
T 3b8c_A 671 FSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFG 742 (885)
T ss_dssp SCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCC
T ss_pred cCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccC
Confidence 99999999999999875 89988876542 223 23333 444555566677777666654433221000000000
Q ss_pred CC-CCCCCcchhh-hhHHHHHHHhhhcccccccccCccccccccccchhHHHHHHHHHHHHHHHHhhccccceecccChh
Q psy10301 916 AE-YGSLPTQHFT-IIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQVIIVQYGGIAFATHSLTLE 993 (1119)
Q Consensus 916 ~~-~~~~~~~~~t-~~f~~~v~~q~fn~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~ 993 (1119)
.+ ........+| ++|.++++.|+ +.+++|+.+ .++|+.. .|++++.+++..++++++.++.+..+|++.|+++.
T Consensus 743 ~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 818 (885)
T 3b8c_A 743 VRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS--WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWG 818 (885)
T ss_dssp SSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT--TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTT
T ss_pred cccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC--CCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHH
Confidence 00 0000122334 45667777776 789999854 2344333 44444444445555565555544556679999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCcCc
Q psy10301 994 QWGWCLFFGVGTLVWQQIVTTVPTKRLP 1021 (1119)
Q Consensus 994 ~w~~~~~~~~~~l~~~~~vk~i~~~~~~ 1021 (1119)
+|++++++++..+++.++.|++.++.+.
T Consensus 819 ~~~~~~~~~~~~~~~~e~~k~~~~~~~~ 846 (885)
T 3b8c_A 819 WAGVIWLYSIVTYFPLDVFKFAIRYILS 846 (885)
T ss_dssp THHHHHHHTGGGTHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999987665443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-77 Score=740.72 Aligned_cols=509 Identities=25% Similarity=0.346 Sum_probs=413.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhHH---HHHHHHhhhhcCCCeEEEEe-CCEEEEEEcCCcccCcEEEEcCCCeecc
Q psy10301 125 YEWIEGAAILVSVIVVVLVTAFNDYSKE---KQFRGLQNQIEGEHKFAVIR-QNELKQIFVGDIVVGDICQIKYGDLLPA 200 (1119)
Q Consensus 125 ~~~~e~~~il~~vi~v~~v~~~~~~~~~---k~~~~L~~~~~~~~~~~ViR-~g~~~~I~~~dLvvGDIV~l~~Gd~vPa 200 (1119)
..|+|++++++.+++ +...++.+.++ +..++|.+. .+.+++|+| ||++++|+++||+|||+|.|++||.|||
T Consensus 185 ~~yfe~a~~ii~~~l--lg~~le~~a~~~~~~ai~~L~~l--~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPa 260 (736)
T 3rfu_A 185 AVYFEAAAVITTLVL--LGQVLELKAREQTGSAIRALLKL--VPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPV 260 (736)
T ss_dssp CCCHHHHHHHHHHHH--HHHHHHHHHHCCCSSHHHHHTCC--CCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCS
T ss_pred ccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccc
Confidence 358887765543332 22333344333 345555544 356788888 9999999999999999999999999999
Q ss_pred cEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhh
Q psy10301 201 DGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDK 280 (1119)
Q Consensus 201 Dgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~ 280 (1119)
||+|++|+ +.||||+|||||.|+.|.+ ++.+++||.+.+|+++++|+++|.+|.+|+|..++..++
T Consensus 261 Dg~vl~G~-~~VDES~LTGES~Pv~K~~--gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~----------- 326 (736)
T 3rfu_A 261 DGEVQEGR-SFVDESMVTGEPIPVAKEA--SAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQ----------- 326 (736)
T ss_dssp CEEECSSC-EEEECSSSTTCSSCEEECT--TCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHH-----------
T ss_pred cEEEEECc-eEeeecccCCccccEEecc--CCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhh-----------
Confidence 99999997 5899999999999999987 567999999999999999999999999999998886432
Q ss_pred hhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHH
Q psy10301 281 KKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFR 360 (1119)
Q Consensus 281 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~ 360 (1119)
.+++|+|+..++++.++..+.+++++++++++.+ .. ....|
T Consensus 327 --------------------------~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~---~~----~~~~~------ 367 (736)
T 3rfu_A 327 --------------------------RSRAPIQRLADTVSGWFVPAVILVAVLSFIVWAL---LG----PQPAL------ 367 (736)
T ss_dssp --------------------------SSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HC----SSSST------
T ss_pred --------------------------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC----CCchH------
Confidence 5689999999999998887777777666554332 11 11113
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcC
Q psy10301 361 EFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCE 440 (1119)
Q Consensus 361 ~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 440 (1119)
...+..++++++++|||+|++++++++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+
T Consensus 368 --~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~ 445 (736)
T 3rfu_A 368 --SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDD 445 (736)
T ss_dssp --THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESS
T ss_pred --HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecC
Confidence 245678899999999999999999999999999999999999999999999999999999999999999999987322
Q ss_pred eEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceee
Q psy10301 441 VQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTR 520 (1119)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~ 520 (1119)
. +++ +.+..+.++. ....+|.+.|++.++.+.+... ..
T Consensus 446 ~-----------~~~--~~l~~aa~le-----------------~~s~hPla~Aiv~~a~~~~~~~------------~~ 483 (736)
T 3rfu_A 446 F-----------VED--NALALAAALE-----------------HQSEHPLANAIVHAAKEKGLSL------------GS 483 (736)
T ss_dssp S-----------CHH--HHHHHHHHHH-----------------HSSCCHHHHHHHHHHHTTCCCC------------CC
T ss_pred C-----------CHH--HHHHHHHHHh-----------------hcCCChHHHHHHHHHHhcCCCc------------cC
Confidence 1 121 2222222221 1235799999999987665432 23
Q ss_pred eecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeec
Q psy10301 521 VYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDF 600 (1119)
Q Consensus 521 ~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l 600 (1119)
..+|++.+++.... ..+|+. +.+|+++.+.+.+... ++ ..+..+.++.+|+|++++|+
T Consensus 484 ~~~f~~~~g~gv~~-~~~g~~--~~~G~~~~~~~~~~~~-----------~~-----~~~~~~~~~~~G~~vl~va~--- 541 (736)
T 3rfu_A 484 VEAFEAPTGKGVVG-QVDGHH--VAIGNARLMQEHGGDN-----------AP-----LFEKADELRGKGASVMFMAV--- 541 (736)
T ss_dssp CSCCCCCTTTEEEE-CSSSSC--EEEESHHHHHHHCCCC-----------HH-----HHHHHHHHHHTTCEEEEEEE---
T ss_pred cccccccCCceEEE-EECCEE--EEEcCHHHHHHcCCCh-----------hH-----HHHHHHHHHhcCCeEEEEEE---
Confidence 34677777654322 223432 4569998876654210 11 23456789999999999986
Q ss_pred ccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcC
Q psy10301 601 VTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK 680 (1119)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~ 680 (1119)
|.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 542 --------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~- 594 (736)
T 3rfu_A 542 --------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK- 594 (736)
T ss_dssp --------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC-
T ss_pred --------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC-
Confidence 34799999999999999999999999999999999999999999999999993
Q ss_pred CCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhh
Q psy10301 681 PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK 760 (1119)
Q Consensus 681 ~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk 760 (1119)
.++++++|++|.++|+.+++ .++.|+|+|||.||+|||+
T Consensus 595 ------------------------------------~v~a~~~P~~K~~~v~~l~~-----~g~~V~~vGDG~ND~paL~ 633 (736)
T 3rfu_A 595 ------------------------------------KVVAEIMPEDKSRIVSELKD-----KGLIVAMAGDGVNDAPALA 633 (736)
T ss_dssp ------------------------------------CEECSCCHHHHHHHHHHHHH-----HSCCEEEEECSSTTHHHHH
T ss_pred ------------------------------------EEEEecCHHHHHHHHHHHHh-----cCCEEEEEECChHhHHHHH
Confidence 37899999999999999854 4788999999999999999
Q ss_pred cCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q psy10301 761 KADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 825 (1119)
Q Consensus 761 ~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f 825 (1119)
+|||||||| +|+|+++++||+++.++++++|.+++++||+++++|++++.|.+.+|++++.++.
T Consensus 634 ~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 634 KADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp HSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 8999999999999999999999999999999999999999999999999988875
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-74 Score=710.68 Aligned_cols=532 Identities=24% Similarity=0.310 Sum_probs=413.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEE
Q psy10301 127 WIEGAAILVSVIVVVLVTAFNDYSKEK---QFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGI 203 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~~~~~~~k---~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgi 203 (1119)
|++.+++++.++ .+...++++.++| ..++|.+. .+.+++|+|||++++|+++||+|||+|.|++||.|||||+
T Consensus 95 ~~~~~~~i~~~~--~ig~~le~~~~~~~~~~l~~l~~l--~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~ 170 (645)
T 3j08_A 95 FYETSVLLLAFL--LLGRTLEARAKSRTGEAIKKLVGL--QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGV 170 (645)
T ss_dssp CCCSHHHHHHHH--HHHHHHHHHHHCCCCCCCHHHHHT--SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEE
Confidence 566655444433 2233445554443 34555444 3678999999999999999999999999999999999999
Q ss_pred EEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhc
Q psy10301 204 LIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKK 283 (1119)
Q Consensus 204 ll~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~ 283 (1119)
+++|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|..|+|..++..++
T Consensus 171 vl~G~-~~VdeS~LTGES~Pv~K~~--g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~-------------- 233 (645)
T 3j08_A 171 VVEGE-SYVDESMISGEPVPVLKSK--GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM-------------- 233 (645)
T ss_dssp EEECC-EEEECHHHHCCSSCEEECT--TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCC--------------
T ss_pred EEECc-EEEEcccccCCCCceecCC--CCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhh--------------
Confidence 99997 5899999999999999987 568999999999999999999999999999999887653
Q ss_pred ccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHH
Q psy10301 284 KRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 363 (1119)
Q Consensus 284 ~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~ 363 (1119)
.+++|+|+..++++.++..+.+++++++++. ++. ..+.+| .
T Consensus 234 -----------------------~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~---~~~-----~~~~~~--------~ 274 (645)
T 3j08_A 234 -----------------------GSKPPIQRLADKVVAYFIPTVLLVAISAFIY---WYF-----IAHAPL--------L 274 (645)
T ss_dssp -----------------------CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---SSC-----CCSCSC--------C
T ss_pred -----------------------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-----hcCCcH--------H
Confidence 5689999999999887765555444443322 211 112222 1
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEe
Q psy10301 364 RFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 443 (1119)
Q Consensus 364 ~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 443 (1119)
..+..++++++++|||+||+++++++..++.+++++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 275 ~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-- 352 (645)
T 3j08_A 275 FAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-- 352 (645)
T ss_dssp CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS--
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC--
Confidence 235567899999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeec
Q psy10301 444 KNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT 523 (1119)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~ 523 (1119)
+++ +.+..+.++. ....+|.+.|++.++.+.|...... .+
T Consensus 353 ---------~~~--~~l~~aa~~e-----------------~~s~hPla~Aiv~~a~~~g~~~~~~------------~~ 392 (645)
T 3j08_A 353 ---------DER--ELLRLAAIAE-----------------RRSEHPIAEAIVKKALEHGIELGEP------------EK 392 (645)
T ss_dssp ---------CHH--HHHHHHHHHH-----------------TTCCSHHHHHHHHHHHHTTCCCCSC------------CC
T ss_pred ---------CHH--HHHHHHHHHh-----------------hcCCChhHHHHHHHHHhcCCCcCCc------------cc
Confidence 111 2222121111 1235799999999998876543211 01
Q ss_pred CCCCcc-eEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeeccc
Q psy10301 524 FNSVRK-SMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 602 (1119)
Q Consensus 524 F~s~rk-~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~ 602 (1119)
|++... .+.. .-+.+|+++.+.+... +..++ .++..+.++.+|+|++++|+
T Consensus 393 ~~~~~g~g~~~--------~~v~~g~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~g~~~l~va~----- 444 (645)
T 3j08_A 393 VEVIAGEGVVA--------DGILVGNKRLMEDFGV----------AVSNE-----VELALEKLEREAKTAVIVAR----- 444 (645)
T ss_dssp CEEETTTEEEE--------TTEEEECHHHHHHTTC----------CCCHH-----HHHHHHHHHTTTCCCEEEEE-----
T ss_pred eEEecCCceEE--------EEEEECCHHHHHhcCC----------CccHH-----HHHHHHHHHhcCCeEEEEEE-----
Confidence 111111 1111 1245688776654321 11121 23566789999999999986
Q ss_pred chhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCC
Q psy10301 603 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG 682 (1119)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~ 682 (1119)
|++++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 445 ------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--- 497 (645)
T 3j08_A 445 ------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--- 497 (645)
T ss_dssp ------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---
T ss_pred ------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---
Confidence 35899999999999999999999999999999999999999999999999993
Q ss_pred CceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC
Q psy10301 683 EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762 (1119)
Q Consensus 683 ~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A 762 (1119)
.++++++|++|.++|+.+ +.. +.|+|+|||.||+|||++|
T Consensus 498 ----------------------------------~~~~~~~P~~K~~~v~~l-----~~~-~~v~~vGDg~ND~~al~~A 537 (645)
T 3j08_A 498 ----------------------------------LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQA 537 (645)
T ss_dssp ----------------------------------EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECSSSCHHHHHHS
T ss_pred ----------------------------------EEEEeCCHHhHHHHHHHH-----hhC-CeEEEEeCCHhHHHHHHhC
Confidence 589999999999999997 444 7899999999999999999
Q ss_pred CceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhcc---CCCChhHH
Q psy10301 763 DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV---QDSPLKAV 839 (1119)
Q Consensus 763 dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~---~~spL~~~ 839 (1119)
|+||||| +|++.++++||+++.+++++.+.+++++||++|++|++++.|.+++|++++.+++.+.... .-+|+-+.
T Consensus 538 ~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~ 616 (645)
T 3j08_A 538 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAG 616 (645)
T ss_dssp SEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHH
T ss_pred CEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999888776542211 23444444
Q ss_pred HHHHHHHHHhHHHHhHh
Q psy10301 840 QMLWVNLIMDTLASLAL 856 (1119)
Q Consensus 840 q~L~~nli~d~l~~laL 856 (1119)
-.+....+...+.++-|
T Consensus 617 ~~m~~ss~~vv~nslrl 633 (645)
T 3j08_A 617 LAMAMSSVSVVANSLLL 633 (645)
T ss_dssp HHHHTHHHHHHHHTTSC
T ss_pred HHHhcchHHHHHhhHHh
Confidence 34444444444444433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-74 Score=716.09 Aligned_cols=532 Identities=24% Similarity=0.311 Sum_probs=414.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEE
Q psy10301 127 WIEGAAILVSVIVVVLVTAFNDYSKEK---QFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGI 203 (1119)
Q Consensus 127 ~~e~~~il~~vi~v~~v~~~~~~~~~k---~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgi 203 (1119)
|++.+++++.++ .+...++++.++| ..++|.+. .+.+++|+|||++++|+++||+|||+|.|++||.|||||+
T Consensus 173 ~~~~~~~i~~~~--~ig~~le~~~~~~~~~~i~~l~~l--~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~ 248 (723)
T 3j09_A 173 FYETSVLLLAFL--LLGRTLEARAKSRTGEAIKKLVGL--QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGV 248 (723)
T ss_dssp CCTTHHHHHHHH--HHHHHHHHHHHTTCCCTTHHHHHT--SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc--CCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEE
Confidence 566655444333 2333445555444 34455443 3678999999999999999999999999999999999999
Q ss_pred EEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHHhhhhhhhc
Q psy10301 204 LIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQEKKDKKKK 283 (1119)
Q Consensus 204 ll~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~~~~~~~~~ 283 (1119)
+++|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|+|..++..++
T Consensus 249 vl~G~-~~VdeS~LTGES~pv~K~~--g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~-------------- 311 (723)
T 3j09_A 249 VVEGE-SYVDESMISGEPVPVLKSK--GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM-------------- 311 (723)
T ss_dssp EEECC-EEEECHHHHCCSSCEEECT--TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC--------------
T ss_pred EEECC-eEEecccccCCCcceeecC--CCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh--------------
Confidence 99997 5899999999999999986 568999999999999999999999999999999887653
Q ss_pred ccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhHHHHHHHHH
Q psy10301 284 KRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 363 (1119)
Q Consensus 284 ~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~~~~~~~~~ 363 (1119)
.+++|+|+..++++.++..+.++++++++++ |+. ..+.+| .
T Consensus 312 -----------------------~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~---~~~-----~~~~~~--------~ 352 (723)
T 3j09_A 312 -----------------------GSKPPIQRLADKVVAYFIPTVLLVAISAFIY---WYF-----IAHAPL--------L 352 (723)
T ss_dssp -----------------------CSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT---SCS-----STTCTT--------C
T ss_pred -----------------------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-----hcCCcH--------H
Confidence 5689999999999887765555444433322 211 112223 2
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEe
Q psy10301 364 RFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 443 (1119)
Q Consensus 364 ~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 443 (1119)
..+..++++++++|||+|++++++++..++.+++++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 353 ~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~-- 430 (723)
T 3j09_A 353 FAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-- 430 (723)
T ss_dssp CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS--
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC--
Confidence 345678899999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeec
Q psy10301 444 KNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT 523 (1119)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~ 523 (1119)
+++ +.+..+.++. ....+|.+.|++.++.+.+...... -+
T Consensus 431 ---------~~~--~~l~~aa~~e-----------------~~s~hP~~~Ai~~~a~~~~~~~~~~------------~~ 470 (723)
T 3j09_A 431 ---------DER--ELLRLAAIAE-----------------RRSEHPIAEAIVKKALEHGIELGEP------------EK 470 (723)
T ss_dssp ---------CHH--HHHHHHHHHH-----------------TTCCSHHHHHHHHHHHHTTCCCCSC------------CC
T ss_pred ---------CHH--HHHHHHHHHh-----------------ccCCCchhHHHHHHHHhcCCCcCCc------------cc
Confidence 111 1222221111 1235799999999998776543211 01
Q ss_pred CCCCc-ceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeeccc
Q psy10301 524 FNSVR-KSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 602 (1119)
Q Consensus 524 F~s~r-k~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~ 602 (1119)
|.+.. +.... .-+.+|+++.+.+.... ..++ .++..+.++.+|+|++++|+
T Consensus 471 ~~~~~g~g~~~--------~~~~~g~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~g~~~~~va~----- 522 (723)
T 3j09_A 471 VEVIAGEGVVA--------DGILVGNKRLMEDFGVA----------VSNE-----VELALEKLEREAKTAVIVAR----- 522 (723)
T ss_dssp CEEETTTEEEE--------TTEEEECHHHHHHTTCC----------CCHH-----HHHHHHHHHTTTCEEEEEEE-----
T ss_pred eEEecCCceEE--------EEEEECCHHHHHhcCCC----------ccHH-----HHHHHHHHHhcCCeEEEEEE-----
Confidence 11111 11111 12456887766543221 1121 24567889999999999986
Q ss_pred chhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCC
Q psy10301 603 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG 682 (1119)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~ 682 (1119)
|++++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 523 ------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--- 575 (723)
T 3j09_A 523 ------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--- 575 (723)
T ss_dssp ------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---
T ss_pred ------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc---
Confidence 46899999999999999999999999999999999999999999999999993
Q ss_pred CceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC
Q psy10301 683 EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 762 (1119)
Q Consensus 683 ~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A 762 (1119)
.++++++|++|..+|+.+ +.. +.|+|+|||.||+|||++|
T Consensus 576 ----------------------------------~~~~~~~P~~K~~~v~~l-----~~~-~~v~~vGDg~ND~~al~~A 615 (723)
T 3j09_A 576 ----------------------------------LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQA 615 (723)
T ss_dssp ----------------------------------EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECSSTTHHHHHHS
T ss_pred ----------------------------------EEEccCCHHHHHHHHHHH-----hcC-CeEEEEECChhhHHHHhhC
Confidence 589999999999999997 444 7899999999999999999
Q ss_pred CceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhcc---CCCChhHH
Q psy10301 763 DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV---QDSPLKAV 839 (1119)
Q Consensus 763 dVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~---~~spL~~~ 839 (1119)
||||||| +|+++++++||+++.+++++.+.+++++||++|++|++++.|.+++|++++.+++.+.... .-+|+-+.
T Consensus 616 ~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~ 694 (723)
T 3j09_A 616 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAG 694 (723)
T ss_dssp SEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHH
T ss_pred CEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999888876653322 22444443
Q ss_pred HHHHHHHHHhHHHHhHh
Q psy10301 840 QMLWVNLIMDTLASLAL 856 (1119)
Q Consensus 840 q~L~~nli~d~l~~laL 856 (1119)
-.+....+...+.++-|
T Consensus 695 ~~m~~ss~~vv~nslrl 711 (723)
T 3j09_A 695 LAMAMSSVSVVANSLLL 711 (723)
T ss_dssp HHHHTHHHHHHHHTTSC
T ss_pred HHHhccHHHHHHHHHHh
Confidence 33434434444444443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-27 Score=264.71 Aligned_cols=139 Identities=26% Similarity=0.471 Sum_probs=126.3
Q ss_pred cEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHH
Q psy10301 628 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 707 (1119)
Q Consensus 628 l~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 707 (1119)
-.+.|.+.+.|+++|++.++++.|++.|++++|+|||+..++..+++++|+.
T Consensus 125 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------------- 176 (263)
T 2yj3_A 125 GEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------------------------- 176 (263)
Confidence 3578999999999999999999999999999999999999999999999983
Q ss_pred HHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccC
Q psy10301 708 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDD 787 (1119)
Q Consensus 708 ~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~ 787 (1119)
.+|+...|++|..+++.+ +..++.|+|+|||.||++|++.||+|++|| ++++.+++.+|+++.++
T Consensus 177 ---------~~f~~~~p~~k~~~~~~l-----~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~ 241 (263)
T 2yj3_A 177 ---------EYYSNLSPEDKVRIIEKL-----KQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSN 241 (263)
Confidence 234555699999988876 556778999999999999999999999999 78999999999999888
Q ss_pred ChhHHHHHHHHHHHHHHHhHHH
Q psy10301 788 NFSSIVKAVMWGRNVYDSISKF 809 (1119)
Q Consensus 788 ~f~~i~~~i~~GR~~~~~i~k~ 809 (1119)
++..+..++..+|.++.+|+++
T Consensus 242 ~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 242 DIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999999875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-24 Score=204.28 Aligned_cols=108 Identities=27% Similarity=0.379 Sum_probs=99.2
Q ss_pred HHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCcccccCCCCCccc
Q psy10301 155 FRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMV 234 (1119)
Q Consensus 155 ~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l 234 (1119)
.++|.++. +.+++|+|||++++|++++|+|||+|.|++||.|||||++++|+ +.||||+|||||.|+.|.+ ++.+
T Consensus 3 l~~L~~l~--p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~--g~~v 77 (113)
T 2hc8_A 3 IKKLVGLQ--AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSK--GDEV 77 (113)
T ss_dssp HHHHHHHS--CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECT--TCEE
T ss_pred HHHHhcCC--CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECC--CCEE
Confidence 34555543 67899999999999999999999999999999999999999997 7999999999999999987 5689
Q ss_pred cccceeeecceEEEEEEecccchhhHHHHhhcC
Q psy10301 235 LSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGA 267 (1119)
Q Consensus 235 ~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~ 267 (1119)
|+||.+.+|.++++|+++|.+|.+|+|..++..
T Consensus 78 ~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 78 FGATINNTGVLKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHHH
T ss_pred EeCCEEeeceEEEEEEEecCcCHHHHHHHHHHH
Confidence 999999999999999999999999999998853
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=226.71 Aligned_cols=279 Identities=26% Similarity=0.363 Sum_probs=197.4
Q ss_pred HHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCc
Q psy10301 392 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYT 471 (1119)
Q Consensus 392 ~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 471 (1119)
+.++++|+|+++|+++++|+|+++++||||||||||.+.+.+.+++..+. +++ +++..+.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-----------~~~--~~l~~~~~~e---- 71 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------DER--ELLRLAAIAE---- 71 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-----------CHH--HHHHHHHHHT----
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-----------CHH--HHHHHHHHHh----
Confidence 56889999999999999999999999999999999999999998876432 121 1222111111
Q ss_pred cccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHH
Q psy10301 472 SKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEI 551 (1119)
Q Consensus 472 s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~ 551 (1119)
....+|.+.|+..++...|..... .+. .+.++ .+.+.. .-+.+|.++.
T Consensus 72 -------------~~s~hp~~~a~~~~~~~~g~~~~~------~~~-~~~~~----G~~~~~--------~~~~~g~~~~ 119 (287)
T 3a1c_A 72 -------------RRSEHPIAEAIVKKALEHGIELGE------PEK-VEVIA----GEGVVA--------DGILVGNKRL 119 (287)
T ss_dssp -------------TTCCSHHHHHHHHHHHHTTCCCCC------CSC-EEEET----TTEEEE--------TTEEEECHHH
T ss_pred -------------hcCCCHHHHHHHHHHHhcCCCccc------ccc-ceeec----CCCeEE--------EEEEECCHHH
Confidence 123578899999988877653211 011 11111 011110 1133465544
Q ss_pred HHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEE
Q psy10301 552 ILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCL 631 (1119)
Q Consensus 552 il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~l 631 (1119)
+.+.+. +++++ .+...+.+..+|.+++++++ |.+++
T Consensus 120 ~~~~~~----------~~~~~-----~~~~~~~~~~~g~~~i~~~~-----------------------------d~~~~ 155 (287)
T 3a1c_A 120 MEDFGV----------AVSNE-----VELALEKLEREAKTAVIVAR-----------------------------NGRVE 155 (287)
T ss_dssp HHHTTC----------CCCHH-----HHHHHHHHHHTTCEEEEEEE-----------------------------TTEEE
T ss_pred HHhcCC----------CccHH-----HHHHHHHHHhCCCeEEEEEE-----------------------------CCEEE
Confidence 332211 11111 12345678889999999886 23678
Q ss_pred EEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhh
Q psy10301 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDK 711 (1119)
Q Consensus 632 G~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~ 711 (1119)
+.+..+++++|++.++++.|+++|+++.++||++...+..+++.+|+.
T Consensus 156 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~-------------------------------- 203 (287)
T 3a1c_A 156 GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------- 203 (287)
T ss_dssp EEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------------
T ss_pred EEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--------------------------------
Confidence 888899999999999999999999999999999999999999999983
Q ss_pred hcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhH
Q psy10301 712 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 712 i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~ 791 (1119)
..|....|+.|...++.+ +.. +.++|+||+.||++|.+.|++++++| ++.+..+..+|+++.++++..
T Consensus 204 -----~~f~~i~~~~K~~~~~~l-----~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~ 271 (287)
T 3a1c_A 204 -----LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRD 271 (287)
T ss_dssp -----EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHH
T ss_pred -----eeeeecChHHHHHHHHHH-----hcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHH
Confidence 244555688998888876 445 78999999999999999999999998 677777788999998889999
Q ss_pred HHHHHHHHHHHHHHhH
Q psy10301 792 IVKAVMWGRNVYDSIS 807 (1119)
Q Consensus 792 i~~~i~~GR~~~~~i~ 807 (1119)
+..++..+|.++++|+
T Consensus 272 l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 272 VVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHHTTC-------
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999875
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=202.22 Aligned_cols=115 Identities=24% Similarity=0.356 Sum_probs=101.7
Q ss_pred HhHHHHHHHHhhhhcCCCeEEEEeCCE------EEEEEcCCcccCcEEEEcCCCeecccEEEEeeCceEEecccCCCCCc
Q psy10301 149 YSKEKQFRGLQNQIEGEHKFAVIRQNE------LKQIFVGDIVVGDICQIKYGDLLPADGILIQSNDLKIDESSLTGESD 222 (1119)
Q Consensus 149 ~~~~k~~~~L~~~~~~~~~~~ViR~g~------~~~I~~~dLvvGDIV~l~~Gd~vPaDgill~g~~l~VDES~LTGES~ 222 (1119)
++.++..++|.++. +.+++|+|+|+ +++|++++|+|||+|.|++||.|||||++++|+. .||||+|||||.
T Consensus 3 ~ka~~~l~~L~~l~--p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~ 79 (124)
T 2kij_A 3 FTMSEALAKLISLQ--ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAM 79 (124)
T ss_dssp ---CCHHHHHHHTC--CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSS
T ss_pred HHHHHHHHHHhccC--CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCc
Confidence 44555677776654 67899999764 7899999999999999999999999999999986 899999999999
Q ss_pred ccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCC
Q psy10301 223 HVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGAT 268 (1119)
Q Consensus 223 pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~ 268 (1119)
|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|+|..++..+
T Consensus 80 pv~k~~--g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 80 PVAKKP--GSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp CEECCT--TEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred cEEeCC--CCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999987 57899999999999999999999999999999998654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=209.59 Aligned_cols=276 Identities=28% Similarity=0.356 Sum_probs=187.0
Q ss_pred ccchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCC
Q psy10301 403 VRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 482 (1119)
Q Consensus 403 vr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~ 482 (1119)
+|+++++|.|++++.|||||+||||.|+|+|.++...+. ...+... +...+ .. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------~~~~~~~-~~~~~--~~-~------------ 54 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------SEDELLQ-IAASL--EA-R------------ 54 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----------CHHHHHH-HHHHH--HT-T------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----------CHHHHHH-HHHHh--hc-c------------
Confidence 588999999999999999999999999999998876432 1122221 11111 11 0
Q ss_pred CcccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhccccccc
Q psy10301 483 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGR 562 (1119)
Q Consensus 483 ~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~ 562 (1119)
...+...++...+...|..... ....+.++ .+.+...+ ++. . +..|.++.+...+...
T Consensus 55 ----s~~~~~~a~~~~~~~~g~~~~~-------~~~~~~~~----g~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~--- 112 (280)
T 3skx_A 55 ----SEHPIAAAIVEEAEKRGFGLTE-------VEEFRAIP----GKGVEGIV--NGR-R-YMVVSPGYIRELGIKT--- 112 (280)
T ss_dssp ----CCSHHHHHHHHHHHHTTCCCCC-------CEEEEEET----TTEEEEEE--TTE-E-EEEECHHHHHHTTCCC---
T ss_pred ----CCCHHHHHHHHHHHhcCCCCCC-------ccceeecC----CCEEEEEE--CCE-E-EEEecHHHHHHcCCCc---
Confidence 1134455666666665543211 11111111 12222222 122 1 2236666554433211
Q ss_pred CCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCc
Q psy10301 563 NGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 642 (1119)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~ 642 (1119)
. .....+..++.+.+.+++ +..++|.+.+.|+++|
T Consensus 113 -------~---------~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~ 147 (280)
T 3skx_A 113 -------D---------ESVEKLKQQGKTVVFILK-----------------------------NGEVSGVIALADRIRP 147 (280)
T ss_dssp -------C---------TTHHHHHTTTCEEEEEEE-----------------------------TTEEEEEEEEEEEECT
T ss_pred -------h---------HHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEecCCCCH
Confidence 0 123455667777776654 3367899999999999
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEec
Q psy10301 643 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 722 (1119)
Q Consensus 643 ~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~ 722 (1119)
++.++++.|++.|+++.++||++...+..+++.+|+. ..|...
T Consensus 148 ~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------------------~~f~~~ 190 (280)
T 3skx_A 148 ESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD-------------------------------------DYFAEV 190 (280)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------EEECSC
T ss_pred hHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-------------------------------------hHhHhc
Confidence 9999999999999999999999999999999999983 346667
Q ss_pred ChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHH
Q psy10301 723 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 802 (1119)
Q Consensus 723 sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~ 802 (1119)
.|.+|...++.+.+. . .++|+||+.||++|++.|++|++|| ++++.+++.||+++..+++..+.+++..+|++
T Consensus 191 ~~~~k~~~~k~~~~~-----~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~ 263 (280)
T 3skx_A 191 LPHEKAEKVKEVQQK-----Y-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKT 263 (280)
T ss_dssp CGGGHHHHHHHHHTT-----S-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhc-----C-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 799999999887532 2 5689999999999999999999999 78899999999999999999999999999999
Q ss_pred HHHhHHHHHHHHh
Q psy10301 803 YDSISKFLQFQLT 815 (1119)
Q Consensus 803 ~~~i~k~i~f~l~ 815 (1119)
+.++++++.|.+.
T Consensus 264 ~~~~~~n~~~~~~ 276 (280)
T 3skx_A 264 YSKFHGLSAWSHP 276 (280)
T ss_dssp CC-----------
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-19 Score=182.40 Aligned_cols=133 Identities=21% Similarity=0.259 Sum_probs=106.2
Q ss_pred ccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhcccccccCCe
Q psy10301 487 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGH 565 (1119)
Q Consensus 487 ~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~~~~ 565 (1119)
.+||+|.|++.++...+ ....+.. +..+..+||||.||+|+++++. ++++++|+|||||.|+++|+.+.. +|.
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~---~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~-~g~ 105 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASR---WQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH-NGE 105 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHH---SEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEE-TTE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhc---CeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhc-CCC
Confidence 36999999998864322 1222333 4567899999999999999987 678999999999999999998764 788
Q ss_pred eecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCC
Q psy10301 566 LEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDP 639 (1119)
Q Consensus 566 ~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDp 639 (1119)
..+++++.++++ .+.++.||++|+||||+|||.++.... .. ..+.|+||+|+|++||-|.
T Consensus 106 ~~~l~~~~~~~i-~~~~~~la~~GlRvLavA~k~~~~~~~-----------~~--~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 106 IVPLDDIMLRKI-KRVTDTLNRQGLRVVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EEECCHHHHHHH-HHHHHHHHHTTCEEEEEEEEEEECCSS-----------CC--CGGGSCSEEEEEEEEEEC-
T ss_pred cccCCHHHHHHH-HHHHHHHHhCCCEEEEEEEEECCCCcc-----------cc--CccccCCcEEEehhccccc
Confidence 899999888776 568899999999999999999875321 11 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-17 Score=186.39 Aligned_cols=146 Identities=13% Similarity=0.137 Sum_probs=112.3
Q ss_pred ccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhh--hc
Q psy10301 636 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDK--VW 713 (1119)
Q Consensus 636 ieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~--i~ 713 (1119)
..+++||+++++++.|+++|++++|+|||+..++.++|+++|+..+...+.. +.-++.. +.+.. ..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~-n~l~~~~-----------~~~~~~~~~ 205 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDFDE-----------NGVLKGFKG 205 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEE-ECEEECT-----------TSBEEEECS
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEe-eeEEEcc-----------cceeEeccc
Confidence 3579999999999999999999999999999999999999998644322211 1111100 00000 00
Q ss_pred CceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhh---cCCceEEEcc------CccHHHHhccCeee
Q psy10301 714 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK---KADVGFAMGI------TGTDVAKEASDIIL 784 (1119)
Q Consensus 714 ~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk---~AdVGiamg~------~g~~~ak~aaDiil 784 (1119)
+...++++..|.+|...+..+ +..++.|+|+|||+||+||++ .||+|||||. ++++.+++++|+||
T Consensus 206 ~~i~~~~k~~~~~k~~~~~~~-----~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl 280 (297)
T 4fe3_A 206 ELIHVFNKHDGALKNTDYFSQ-----LKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 280 (297)
T ss_dssp SCCCTTCHHHHHHTCHHHHHH-----TTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEE
T ss_pred cccchhhcccHHHHHHHHHHh-----hccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEE
Confidence 122356777888888777765 677889999999999999954 9999999996 67788899999999
Q ss_pred ccCChhHHHHHHHH
Q psy10301 785 TDDNFSSIVKAVMW 798 (1119)
Q Consensus 785 ~d~~f~~i~~~i~~ 798 (1119)
+||++.+++.+|.+
T Consensus 281 ~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 281 VKEESLEVVNSILQ 294 (297)
T ss_dssp ETCCBCHHHHHHHH
T ss_pred ECCCChHHHHHHHH
Confidence 99999999998753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=135.47 Aligned_cols=141 Identities=16% Similarity=0.252 Sum_probs=115.4
Q ss_pred EEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHH
Q psy10301 630 CLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLL 709 (1119)
Q Consensus 630 ~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~ 709 (1119)
.++.+.++|.+ +++.|+++|+++.++||++...+..+++++|+.
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~------------------------------ 86 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE------------------------------ 86 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS------------------------------
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH------------------------------
Confidence 44555554443 999999999999999999999999999999993
Q ss_pred hhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC-
Q psy10301 710 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN- 788 (1119)
Q Consensus 710 ~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~- 788 (1119)
.+|.. +.+|...++.+.+. ++...+.++++||+.||++|++.|++|++|+ ++.+.+++.||+++.+++
T Consensus 87 -------~~f~~--~~~K~~~~~~~~~~-~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~ 155 (189)
T 3mn1_A 87 -------HLFQG--REDKLVVLDKLLAE-LQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGG 155 (189)
T ss_dssp -------EEECS--CSCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTT
T ss_pred -------HHhcC--cCChHHHHHHHHHH-cCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCC
Confidence 11221 26677888777655 4556678999999999999999999999999 789999999999999764
Q ss_pred ---hhHHHHHHHHHHHHHHHhHHHHHHHHhch
Q psy10301 789 ---FSSIVKAVMWGRNVYDSISKFLQFQLTVN 817 (1119)
Q Consensus 789 ---f~~i~~~i~~GR~~~~~i~k~i~f~l~~n 817 (1119)
+..+.+.+..+|..+++|++++.|.+.+|
T Consensus 156 ~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 156 EGAAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp TTHHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred CcHHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 67788888999999999999999998887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.16 E-value=7.2e-11 Score=134.71 Aligned_cols=151 Identities=13% Similarity=0.154 Sum_probs=114.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.++++.|+++|+++.++||+....+..+++++|+..--...+.+... .+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~-------------------------~~ 232 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG-------------------------KL 232 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT-------------------------EE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC-------------------------ee
Confidence 79999999999999999999999999999999999999984211110100000 01
Q ss_pred EEe-----cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 719 LAR-----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar-----~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
..+ ..+..|..+++.+.+. ++...+.++++|||.||++|++.|++|++| ++.+..++.||+++..+++.++.
T Consensus 233 tg~~~~~~~~~kpk~~~~~~~~~~-lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~ 309 (335)
T 3n28_A 233 TGQVLGEVVSAQTKADILLTLAQQ-YDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVV 309 (335)
T ss_dssp EEEEESCCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHH
T ss_pred eeeecccccChhhhHHHHHHHHHH-cCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHH
Confidence 111 1245677777766554 466778899999999999999999999999 68999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhch
Q psy10301 794 KAVMWGRNVYDSISKFLQFQLTVN 817 (1119)
Q Consensus 794 ~~i~~GR~~~~~i~k~i~f~l~~n 817 (1119)
.++.......++++.++.|.+++|
T Consensus 310 ~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 310 CILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHHHHHHHHTTCCCCC--------
T ss_pred HHHHhHHHHhhhhccccccccccc
Confidence 999988888889999999988877
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2.7e-10 Score=122.50 Aligned_cols=155 Identities=17% Similarity=0.140 Sum_probs=110.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHH----Hh-hcC------------
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR----RV-RDN------------ 700 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~----~~-~~~------------ 700 (1119)
..+.+++.++|++|+++|++++++||++...+..+++++|+.. .+++.+|..+.. .+ ...
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~ 97 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMS 97 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999832 244444432210 00 000
Q ss_pred -----c----------------hhhhHHHHhhhcC--ceEEE-----EecCh--hhHHHHHHHHHHhhcCCCCCEEEEEc
Q psy10301 701 -----N----------------GEVQQNLLDKVWP--RLRVL-----ARSSP--SDKYTLVKGMIDSKISAGREVVAVTG 750 (1119)
Q Consensus 701 -----~----------------~~~~~~~~~~i~~--~~~v~-----ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~iG 750 (1119)
. -....+.++++.. .+.+. ....| .+|...++.+.+. ++...+.++++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~-~~~~~~~~~~iG 176 (227)
T 1l6r_A 98 KRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEILVIG 176 (227)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEEC
T ss_pred HHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHH-hCcCHHHEEEEC
Confidence 0 0000111111100 23333 12234 6899999998765 355556789999
Q ss_pred CCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 751 DG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
|+.||.+|++.|++|++|| ++.+.+++.||+++.+++-.++.++++
T Consensus 177 D~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 177 DSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp CSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred CcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999 889999999999999888889888875
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.1e-10 Score=117.25 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=108.1
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEE
Q psy10301 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLA 720 (1119)
Q Consensus 641 r~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~a 720 (1119)
.++..++|+.|+++|+++.++||++...+..+++++|+.. .|.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-------------------------------------~~~ 79 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------------FFL 79 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------------EEE
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-------------------------------------eec
Confidence 4566799999999999999999999999999999999831 111
Q ss_pred ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH----HHH
Q psy10301 721 RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV----KAV 796 (1119)
Q Consensus 721 r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~----~~i 796 (1119)
. ...|...++.+.+. ++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..++. +.+
T Consensus 80 ~--~k~k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~ 155 (180)
T 1k1e_A 80 G--KLEKETACFDLMKQ-AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMI 155 (180)
T ss_dssp S--CSCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred C--CCCcHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHH
Confidence 1 24567777766544 3445567999999999999999999999998 88899999999999877655555 445
Q ss_pred HHHHHHHHHhHHHHHHHHhch
Q psy10301 797 MWGRNVYDSISKFLQFQLTVN 817 (1119)
Q Consensus 797 ~~GR~~~~~i~k~i~f~l~~n 817 (1119)
...|..|++++.++.|....|
T Consensus 156 l~~~~~~~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 156 LQAQGKSSVFDTAQGFLKSVK 176 (180)
T ss_dssp HHHTTCTHHHHCHHHHHHHGG
T ss_pred HHhcCchhhhhhccchhhhhc
Confidence 567777888888888876654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-10 Score=120.45 Aligned_cols=118 Identities=18% Similarity=0.262 Sum_probs=93.9
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
.+|+.|+++|+++.++||++...+..+++++|+. .+|... .
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~-------------------------------------~~~~~~--k 99 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS-------------------------------------LIYQGQ--D 99 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC-------------------------------------EEECSC--S
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc-------------------------------------EEeeCC--C
Confidence 4699999999999999999999999999999983 122222 5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCCh----hHHHHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF----SSIVKAVMWGRN 801 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f----~~i~~~i~~GR~ 801 (1119)
.|...++.+.+. ++...+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++- ..+.+.+...|.
T Consensus 100 ~k~~~~~~~~~~-~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~ 177 (195)
T 3n07_A 100 DKVQAYYDICQK-LAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARN 177 (195)
T ss_dssp SHHHHHHHHHHH-HCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcc
Confidence 577777777654 4666678999999999999999999999999 8999999999999987664 345555555554
Q ss_pred HHH
Q psy10301 802 VYD 804 (1119)
Q Consensus 802 ~~~ 804 (1119)
.|+
T Consensus 178 ~~~ 180 (195)
T 3n07_A 178 ELD 180 (195)
T ss_dssp SSC
T ss_pred cHH
Confidence 443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.1e-09 Score=117.40 Aligned_cols=157 Identities=23% Similarity=0.288 Sum_probs=110.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecH-------------------hHHHH---
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK-------------------EFNRR--- 696 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~-------------------~~~~~--- 696 (1119)
.+.+.+.++|+++++.|++++++||++...+..+.+++|+......++..+|. ...+.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 56789999999999999999999999999999999999973211222222221 01110
Q ss_pred hhcC------------------------------------------------------chhhhH---HHHhhhc-CceEE
Q psy10301 697 VRDN------------------------------------------------------NGEVQQ---NLLDKVW-PRLRV 718 (1119)
Q Consensus 697 ~~~~------------------------------------------------------~~~~~~---~~~~~i~-~~~~v 718 (1119)
.... .....+ +.+.+.+ ..+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINV 181 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEE
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEE
Confidence 0000 000000 1111111 22332
Q ss_pred E------EecChh--hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChh
Q psy10301 719 L------ARSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFS 790 (1119)
Q Consensus 719 ~------ar~sP~--~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~ 790 (1119)
+ ....|. +|...++.+.+. ++...+.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~ 259 (279)
T 4dw8_A 182 FRSEPYFLELVPQGIDKALSLSVLLEN-IGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDED 259 (279)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGT
T ss_pred EEcCCcEEEEecCCCChHHHHHHHHHH-cCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCc
Confidence 2 133343 799999988776 4666678999999999999999999999999 89999999999999988889
Q ss_pred HHHHHHH
Q psy10301 791 SIVKAVM 797 (1119)
Q Consensus 791 ~i~~~i~ 797 (1119)
++.++|+
T Consensus 260 Gv~~~i~ 266 (279)
T 4dw8_A 260 GVAEAIE 266 (279)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998876
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=5.9e-10 Score=113.74 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=92.1
Q ss_pred cEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCcCCCCceEEEecHhHHHHhhcCchhhh
Q psy10301 628 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT--KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQ 705 (1119)
Q Consensus 628 l~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~--~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~ 705 (1119)
-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 31 g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-------------------------- 76 (168)
T 3ewi_A 31 QKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-------------------------- 76 (168)
T ss_dssp CCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--------------------------
T ss_pred CCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--------------------------
Confidence 345677777776 3899999999999999999 67788888 55651
Q ss_pred HHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeec
Q psy10301 706 QNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 785 (1119)
Q Consensus 706 ~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~ 785 (1119)
++ ..+++|...++.+.+. ++...+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.
T Consensus 77 ------------~~--~g~~~K~~~l~~~~~~-~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~ 140 (168)
T 3ewi_A 77 ------------TE--VSVSDKLATVDEWRKE-MGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICK 140 (168)
T ss_dssp ------------EE--CSCSCHHHHHHHHHHH-TTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECS
T ss_pred ------------EE--ECCCChHHHHHHHHHH-cCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeC
Confidence 11 1245688888887765 4566678999999999999999999999998 899999999999998
Q ss_pred cCChhH
Q psy10301 786 DDNFSS 791 (1119)
Q Consensus 786 d~~f~~ 791 (1119)
+++-.+
T Consensus 141 ~~~~~G 146 (168)
T 3ewi_A 141 CSGGRG 146 (168)
T ss_dssp SCTTTT
T ss_pred CCCCcc
Confidence 766554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.97 E-value=9.3e-10 Score=116.74 Aligned_cols=114 Identities=16% Similarity=0.265 Sum_probs=93.3
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+++.|+++|+++.++||++...+..+++++|+. .+|... ..
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~-------------------------------------~~f~~~--k~ 124 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT-------------------------------------HLYQGQ--SD 124 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-------------------------------------EEECSC--SS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-------------------------------------hhhccc--CC
Confidence 899999999999999999999999999999993 122222 56
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC----hhHHHHHHHHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 801 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~----f~~i~~~i~~GR~ 801 (1119)
|...++.+.+. ++...+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+...+.
T Consensus 125 K~~~l~~~~~~-lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~ 201 (211)
T 3ij5_A 125 KLVAYHELLAT-LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQD 201 (211)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHH-cCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcC
Confidence 78888877665 4666788999999999999999999999999 788999999999998764 3445555544443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=113.71 Aligned_cols=126 Identities=16% Similarity=0.181 Sum_probs=98.4
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+|+.|+++|+++.++||++...+..+++.+|+.. +|... ..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-------------------------------------~~~~~--kp 94 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-------------------------------------YYKGQ--VD 94 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------------------EECSC--SS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------------------ceeCC--CC
Confidence 5999999999999999999999999999999831 11111 22
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC----hhHHHHHHHHHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRNV 802 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~----f~~i~~~i~~GR~~ 802 (1119)
|...++.+.+. ++...+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+...|..
T Consensus 95 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~ 172 (191)
T 3n1u_A 95 KRSAYQHLKKT-LGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNK 172 (191)
T ss_dssp CHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 33444444332 3556678999999999999999999999998 888999999999999877 55566667778888
Q ss_pred HHHhHHHHHHH
Q psy10301 803 YDSISKFLQFQ 813 (1119)
Q Consensus 803 ~~~i~k~i~f~ 813 (1119)
|+.+.+.+.+|
T Consensus 173 ~~~~~~~~~~~ 183 (191)
T 3n1u_A 173 AELAITGYLKQ 183 (191)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhc
Confidence 88776665544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-09 Score=110.80 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=90.3
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+++.|+++|+++.++||++...+..+++.+|+. +++. ...
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--------------------------------------~~~~--~~~ 86 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--------------------------------------VLHG--IDR 86 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--------------------------------------EEES--CSC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--------------------------------------eEeC--CCC
Confidence 899999999999999999999999999999982 1222 256
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
|...++.+.+. ++...+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..++...+
T Consensus 87 k~~~l~~~~~~-~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 87 KDLALKQWCEE-QGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred hHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 77777777654 3555677899999999999999999999999 78999999999999988866655443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.8e-09 Score=109.42 Aligned_cols=121 Identities=21% Similarity=0.282 Sum_probs=95.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhh
Q psy10301 647 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 726 (1119)
Q Consensus 647 aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~ 726 (1119)
+++.|+++|+++.++||++...+..+++++|+.. .+.. ...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------------------~~~~--~kp 79 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-------------------------------------LFQG--VVD 79 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-------------------------------------EECS--CSC
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-------------------------------------eecc--cCC
Confidence 8999999999999999999999999999999831 1111 144
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC----hhHHHHHHHHHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRNV 802 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~----f~~i~~~i~~GR~~ 802 (1119)
|...++.+.+. ++...+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++ +..+.+.+. +..
T Consensus 80 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll--~~~ 155 (164)
T 3e8m_A 80 KLSAAEELCNE-LGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL--GIN 155 (164)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT--TCC
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH--ccC
Confidence 66666666554 3556678999999999999999999999998 899999999999999887 445555544 444
Q ss_pred HHHhHHHH
Q psy10301 803 YDSISKFL 810 (1119)
Q Consensus 803 ~~~i~k~i 810 (1119)
|+.+.+++
T Consensus 156 ~~~~~~~~ 163 (164)
T 3e8m_A 156 LEDFIAVI 163 (164)
T ss_dssp HHHHHHHT
T ss_pred chhhHHhh
Confidence 65555554
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=118.12 Aligned_cols=157 Identities=18% Similarity=0.271 Sum_probs=97.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecH------------------hHHHHh---
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK------------------EFNRRV--- 697 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~------------------~~~~~~--- 697 (1119)
.+.+.+.++++++++.|++++++||+....+..+.+.+|+..+...+++.+|. ...+.+
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 57788999999999999999999999999999999999985432333333332 111100
Q ss_pred hcC--------------------------------------------c-----------hhhhHHHHhhhc---C-ceEE
Q psy10301 698 RDN--------------------------------------------N-----------GEVQQNLLDKVW---P-RLRV 718 (1119)
Q Consensus 698 ~~~--------------------------------------------~-----------~~~~~~~~~~i~---~-~~~v 718 (1119)
... . ....++..+.+. . .+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 000 0 000000011110 0 0111
Q ss_pred ------EEecCh--hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChh
Q psy10301 719 ------LARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFS 790 (1119)
Q Consensus 719 ------~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~ 790 (1119)
+....| .+|...++.+.+. ++...+.++++||+.||.+|++.|++|+||| ++.+..|++||+++.+++-.
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~ 259 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQ-LGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAEN 259 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHH-TTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------
T ss_pred EEecCceEEEecCCCChHHHHHHHHHH-cCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCcc
Confidence 112223 3599999988775 4666678999999999999999999999999 89999999999999988888
Q ss_pred HHHHHHH
Q psy10301 791 SIVKAVM 797 (1119)
Q Consensus 791 ~i~~~i~ 797 (1119)
++.++|+
T Consensus 260 Gv~~~i~ 266 (279)
T 3mpo_A 260 GVAAAIR 266 (279)
T ss_dssp CHHHHHC
T ss_pred HHHHHHH
Confidence 8888765
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.9e-08 Score=111.83 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.+|...++.+.++ ++...+.|+++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.++|+
T Consensus 201 ~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASE-LGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4699999988776 4666678999999999999999999999999 999999999999999888889998886
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=1e-08 Score=113.82 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCe--eeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI--ILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDi--il~d~~f~~i~~~i~ 797 (1119)
.+|...++.+.+. ++...+.++++||+.||.+|++.|++|+||| ++.+.+|++||+ ++.+++-.++.++|+
T Consensus 208 ~~K~~al~~l~~~-lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKM-LGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHH-hCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4699999988775 4666678999999999999999999999999 999999999985 667778889988876
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.87 E-value=9e-09 Score=114.26 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.+|...++.+.+. ++...+.|+++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.++|+
T Consensus 210 ~~K~~~l~~l~~~-lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDR-FDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3699999998776 4666677999999999999999999999999 999999999999999988899998876
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.85 E-value=2.2e-08 Score=109.28 Aligned_cols=70 Identities=24% Similarity=0.304 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.++ ++...+.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|+
T Consensus 183 ~K~~~l~~l~~~-lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEK-LGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 688888888765 4666677999999999999999999999999 899999999999999888899998876
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-08 Score=110.96 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
.+|...++.+.++ ++...+.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.++|++
T Consensus 199 ~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQER-LGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHH-HTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3699999888766 4666777899999999999999999999999 8999999999999999889999988863
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.78 E-value=5.4e-08 Score=104.58 Aligned_cols=154 Identities=19% Similarity=0.244 Sum_probs=106.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh---------------HH---HHhh-c
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE---------------FN---RRVR-D 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~---------------~~---~~~~-~ 699 (1119)
.+.+.+.+++++++++|++++++||+....+..+.+.+|+.. .++..+|.. +. .... .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~ 96 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKR 96 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999999999998732 133333211 00 1111 0
Q ss_pred C-ch------------------hhhHH----HHhhhcCceEEE-----EecC--hhhHHHHHHHHHHhhcCCCCCEEEEE
Q psy10301 700 N-NG------------------EVQQN----LLDKVWPRLRVL-----ARSS--PSDKYTLVKGMIDSKISAGREVVAVT 749 (1119)
Q Consensus 700 ~-~~------------------~~~~~----~~~~i~~~~~v~-----ar~s--P~~K~~iV~~l~~~~~~~~~~~V~~i 749 (1119)
. .- ....+ .++.....+.+. .... ...|...++.+.+. ++...+.++++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~-~~~~~~~~~~i 175 (231)
T 1wr8_A 97 FPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF-LGIKPKEVAHV 175 (231)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH-HTSCGGGEEEE
T ss_pred CCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHH-cCCCHHHEEEE
Confidence 0 00 00111 122211223333 1222 34799999888765 35555678899
Q ss_pred cCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 750 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 750 GDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
||+.||.+|++.|++|++|+ ++.+..++.||+++.+.+-.++.++++
T Consensus 176 GD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp ECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999999 788888999999998777778888775
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.6e-08 Score=111.05 Aligned_cols=72 Identities=28% Similarity=0.364 Sum_probs=64.6
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
.+|...++.+.++ ++...+.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.++|++
T Consensus 193 ~~K~~~l~~l~~~-lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADY-YRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4799999998776 4666677899999999999999999999999 9999999999999999999999988863
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-08 Score=111.87 Aligned_cols=72 Identities=19% Similarity=0.223 Sum_probs=64.2
Q ss_pred hhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 724 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 724 P~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+..|...++.+.+. ++...+.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.++|+
T Consensus 226 ~~~K~~al~~l~~~-lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKR-WNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHH-hCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 35799999988765 4666677999999999999999999999999 999999999999999888889998886
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=106.76 Aligned_cols=139 Identities=14% Similarity=0.136 Sum_probs=101.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..--+..+..+...+ ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---------------------~~~ 132 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDAL---------------------NGL 132 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---------------------EEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEE---------------------Eee
Confidence 46899999999999999999999999999999999999998421111111110000 000
Q ss_pred EEEe-cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 718 VLAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 718 v~ar-~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
+... .....|..+++.+.+. ++...+.++++||+.||.+|++.|+++++| ++.+..++.||+++.+++++.+..++
T Consensus 133 ~~~~~~~~k~k~~~~~~~~~~-~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 133 VTGHMMFSHSKGEMLLVLQRL-LNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp EEESCCSTTHHHHHHHHHHHH-HTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred eccCCCCCCChHHHHHHHHHH-cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHh
Confidence 1111 1245678888777665 355666788999999999999999999999 67888899999999999999999888
Q ss_pred HHHH
Q psy10301 797 MWGR 800 (1119)
Q Consensus 797 ~~GR 800 (1119)
.|-.
T Consensus 210 ~~~~ 213 (217)
T 3m1y_A 210 EGHH 213 (217)
T ss_dssp ----
T ss_pred cccc
Confidence 7643
|
| >2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.9e-09 Score=71.23 Aligned_cols=27 Identities=56% Similarity=1.098 Sum_probs=25.4
Q ss_pred hhhhhhhccchhhhHHHHHHHHHHHhh
Q psy10301 1043 RAAHILWLRGLTRLQTQLRVIRAFKSN 1069 (1119)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
|+||+||+||++|||+|+||++||+++
T Consensus 2 r~gqiLW~RgL~riqtQ~rvi~af~s~ 28 (28)
T 2kne_B 2 RRGQILWFRGLNRIQTQIKVVKAFHSS 28 (28)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCcceeeeccHHHHHHHHHHHHhhhcC
Confidence 679999999999999999999999874
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.6e-08 Score=114.81 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=109.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+.+.. ..+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d-------------------------g~~ 310 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD-------------------------GTL 310 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET-------------------------TEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC-------------------------CEE
Confidence 7999999999999999999999999999999999999999311000000000 011
Q ss_pred EEe-----cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 719 LAR-----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar-----~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
.++ ..++.|..+++.+.+. ++...+.++++||+.||.+|++.|++|+++ ++.+..++.||+++..+++..+.
T Consensus 311 tg~~~~~v~~~kpk~~~~~~~~~~-~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll 387 (415)
T 3p96_A 311 TGRVVGPIIDRAGKATALREFAQR-AGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVL 387 (415)
T ss_dssp EEEECSSCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHH
T ss_pred EeeEccCCCCCcchHHHHHHHHHH-cCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHH
Confidence 111 1266788888877665 355567789999999999999999999999 57888899999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy10301 794 KAVMWGRNVYDS 805 (1119)
Q Consensus 794 ~~i~~GR~~~~~ 805 (1119)
.++.++|.-+..
T Consensus 388 ~~l~~~~~~~~~ 399 (415)
T 3p96_A 388 FLLGVTRGEIEA 399 (415)
T ss_dssp HHTTCCHHHHHH
T ss_pred HHhCCCHHHHHH
Confidence 998877765554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.1e-07 Score=105.58 Aligned_cols=70 Identities=24% Similarity=0.290 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++...+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++|+
T Consensus 198 ~K~~~l~~l~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADV-LGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHH-hCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 799999988765 3555667899999999999999999999999 888889999999998888888888775
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=8.1e-08 Score=100.33 Aligned_cols=132 Identities=22% Similarity=0.252 Sum_probs=93.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++||+....+..+.+.+|+...-...+..... .. ...+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~-~~~~ 134 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------KL-TGDV 134 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------EE-EEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC--------------------EE-cCCc
Confidence 56789999999999999999999999998888888888873100000000000 00 0001
Q ss_pred EEe-cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar-~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
... ..+..|...+..+.+. ++...+.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 135 ~~~~~~~~~K~~~l~~~~~~-lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 135 EGEVLKENAKGEILEKIAKI-EGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp ECSSCSTTHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccCccCCccHHHHHHHHHHH-cCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 111 1245787777777654 4555677999999999999999999999997 55677889999998767776643
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.1e-08 Score=108.84 Aligned_cols=135 Identities=13% Similarity=0.203 Sum_probs=99.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..--+..+..++..+. -.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~t---------------------g~i 237 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLT---------------------DNI 237 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEE---------------------EEE
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeee---------------------eeE
Confidence 48999999999999999999999999999999999999983211111111110000 000
Q ss_pred EE-ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 719 LA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 719 ~a-r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.. -..++.|..+++.+.+. ++...+.++++||+.||.+|++.|++|++++ +.+..++.+|.++..+++..+..+++
T Consensus 238 ~~~~~~~kpkp~~~~~~~~~-lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 238 TLPIMNAANKKQTLVDLAAR-LNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CSSCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred ecccCCCCCCHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 00 01346677777776654 3556677999999999999999999999994 77888889999998889988876653
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.56 E-value=6.4e-07 Score=100.32 Aligned_cols=70 Identities=26% Similarity=0.357 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeec-cCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT-DDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~-d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++...+.++++||+.||.+|++.|++|+||| ++.+..++.||+++. +++-.++.++|+
T Consensus 224 ~K~~~l~~l~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKH-YNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 799999988765 4555667899999999999999999999999 888889999999998 888889988876
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.8e-07 Score=97.15 Aligned_cols=110 Identities=17% Similarity=0.256 Sum_probs=86.4
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
.+++.|+++|+++.++||++...+..+++.+|+.. +|.. ..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-------------------------------------~~~~--~k 100 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-------------------------------------LYQG--QS 100 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------------------EECS--CS
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-------------------------------------eecC--CC
Confidence 48999999999999999999999999999999831 1111 23
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH-HHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV-KAV 796 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~-~~i 796 (1119)
.|...++.+.+. ++...+.++++||+.||.+|++.|+++++++ ++.+.+++.||+++.+.+..+++ +++
T Consensus 101 pk~~~~~~~~~~-~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 101 NKLIAFSDLLEK-LAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp CSHHHHHHHHHH-HTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred CCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 455666665543 2444567899999999999999999999998 67788888999999977655555 444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.9e-07 Score=104.65 Aligned_cols=159 Identities=17% Similarity=0.241 Sum_probs=101.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEE--ecH------hHHHHh-hcCchhhh---H
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL--EGK------EFNRRV-RDNNGEVQ---Q 706 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l--~g~------~~~~~~-~~~~~~~~---~ 706 (1119)
++++++.++++.|++ |+.+.++||++...+..+...+++.. .+..- ... +....+ ......+. .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 568999999999999 99999999999777777777777731 11110 000 000000 00000000 0
Q ss_pred HHHhhhcCce------EEEE----ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcC----CceEEEccCc
Q psy10301 707 NLLDKVWPRL------RVLA----RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA----DVGFAMGITG 772 (1119)
Q Consensus 707 ~~~~~i~~~~------~v~a----r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~A----dVGiamg~~g 772 (1119)
+.++. +..+ ..+. -..+.+|...++.+... ...++|+++|||.||++|++.| ++|||| ++
T Consensus 179 ~~l~~-~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~---~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na 252 (332)
T 1y8a_A 179 ELFRK-LDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES---KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NG 252 (332)
T ss_dssp HHHHH-HHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH---HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SC
T ss_pred HHHHH-HHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh---hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cC
Confidence 01100 0000 0000 11356788888865322 1124589999999999999999 999999 78
Q ss_pred cHHHHhccCeeeccCChhHHHHHH----HHHHHHHHHhHH
Q psy10301 773 TDVAKEASDIILTDDNFSSIVKAV----MWGRNVYDSISK 808 (1119)
Q Consensus 773 ~~~ak~aaDiil~d~~f~~i~~~i----~~GR~~~~~i~k 808 (1119)
.+.+|++||+++.+++..++.++| ..||..+ ++-+
T Consensus 253 ~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 253 NEYALKHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp CHHHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred CHHHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 999999999999988887777664 4677776 5555
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.7e-07 Score=91.98 Aligned_cols=113 Identities=16% Similarity=0.199 Sum_probs=88.3
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEE
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 719 (1119)
..+++.++++.|++.|+++.++||.+...+..+.+.+|+.. .|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------~~ 79 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------IY 79 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-------------------------------------EE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-------------------------------------hc
Confidence 35778999999999999999999999999999999999831 11
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHH
Q psy10301 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 720 ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
.. +..|...++.+.+. ++...+.++++||+.||.+|.+.|+++++++ ++.+..++.||+++.+.+-.+++
T Consensus 80 ~~--~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 80 TG--SYKKLEIYEKIKEK-YSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp EC--C--CHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred cC--CCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 11 22234444444333 3555677899999999999999999999987 77888888999999977766665
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.45 E-value=8.4e-07 Score=97.59 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
..|...++.+.+. ++...+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++|+
T Consensus 190 ~~K~~~~~~l~~~-l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKR-WDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHH-hCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3789888888765 4555667899999999999999999999999 888989999999999888888888876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-07 Score=101.41 Aligned_cols=146 Identities=12% Similarity=0.131 Sum_probs=92.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCcCCCCceEEEecHh-----------HH-----HHh---h
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC-GIVKPGEDYLILEGKE-----------FN-----RRV---R 698 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~-Gi~~~~~~~i~l~g~~-----------~~-----~~~---~ 698 (1119)
.+.+.+.++|++|+++| +++++||+....+..+.+.+ +++..++..+..+|+. +. .+. .
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 46788999999999999 99999999999998887654 1111111112112221 00 000 0
Q ss_pred cC--------c--------------hhhhHH---HHhhhcCceEEE-----EecChh--hHHHHHHHHHHhhcCCCCCEE
Q psy10301 699 DN--------N--------------GEVQQN---LLDKVWPRLRVL-----ARSSPS--DKYTLVKGMIDSKISAGREVV 746 (1119)
Q Consensus 699 ~~--------~--------------~~~~~~---~~~~i~~~~~v~-----ar~sP~--~K~~iV~~l~~~~~~~~~~~V 746 (1119)
.. . .....+ .+.+. ..+.+. ....|. +|...++.+.+ ..| |
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~----~~g--v 174 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRG----ERP--A 174 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHT----TSC--E
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHh----hCC--e
Confidence 00 0 000000 11111 122221 123343 79999999864 334 8
Q ss_pred EEEcCCcCCHHhhhcC--CceEEEccCccHHHHhccCeeecc-CChhHHHHHHH
Q psy10301 747 AVTGDGTNDGPALKKA--DVGFAMGITGTDVAKEASDIILTD-DNFSSIVKAVM 797 (1119)
Q Consensus 747 ~~iGDG~ND~~aLk~A--dVGiamg~~g~~~ak~aaDiil~d-~~f~~i~~~i~ 797 (1119)
+++||+.||.+||+.| +.||||| ++ ++.||+++.+ ++-.++.++|+
T Consensus 175 ia~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 175 IIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 8999999999999999 9999999 66 6889999987 66777777765
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.5e-07 Score=97.43 Aligned_cols=119 Identities=20% Similarity=0.318 Sum_probs=89.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+..- ...+..... ...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~------------------------~~~ 132 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG------------------------KFQ 132 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT------------------------EEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC------------------------ceE
Confidence 7899999999999999999999999998888888 88887321 111111100 000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
-....|..|...++.+ ..+.++++||+.||.+|++.|++|++|+ ++.+ .||+++. ++..+.+.++
T Consensus 133 ~~~~~~~~k~~~l~~l-------~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 133 GIRLRFRDKGEFLKRF-------RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EEECCSSCHHHHHGGG-------TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred CCcCCccCHHHHHHhc-------CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 1345678898888764 3466889999999999999999999999 6655 8899987 6777766654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.2e-06 Score=94.07 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++...+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++|+
T Consensus 190 ~K~~~~~~~~~~-~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRER-MNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 799999888765 4555667899999999999999999999999 888888999999999888888888775
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=9.7e-07 Score=95.62 Aligned_cols=152 Identities=14% Similarity=0.218 Sum_probs=99.6
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH----------HH-------------Hhh
Q psy10301 642 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF----------NR-------------RVR 698 (1119)
Q Consensus 642 ~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~----------~~-------------~~~ 698 (1119)
+.+.+++++++ +|++++++||++...+..+.+++|+..+ ..+++.+|..+ .. ...
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIAD 99 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHH
Confidence 45667787765 6899999999999999999999887422 22333333110 00 000
Q ss_pred c-------C---c----------hhhh---HHHHhhhc----CceEEE------EecChh--hHHHHHHHHHHhhcCCCC
Q psy10301 699 D-------N---N----------GEVQ---QNLLDKVW----PRLRVL------ARSSPS--DKYTLVKGMIDSKISAGR 743 (1119)
Q Consensus 699 ~-------~---~----------~~~~---~~~~~~i~----~~~~v~------ar~sP~--~K~~iV~~l~~~~~~~~~ 743 (1119)
. . . .... .+.+.+.+ ..+.+. -...|. +|...++.+.+. ++...
T Consensus 100 ~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~-~~~~~ 178 (244)
T 1s2o_A 100 GFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQH-LAMEP 178 (244)
T ss_dssp TCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHH-TTCCG
T ss_pred hccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHH-hCCCH
Confidence 0 0 0 0000 01111111 123321 122232 799999998765 45555
Q ss_pred CEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhc-------cCeeeccCChhHHHHHHH
Q psy10301 744 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA-------SDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 744 ~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~a-------aDiil~d~~f~~i~~~i~ 797 (1119)
+.++++||+.||.+|++.|++|++|| ++.+..++. +|+++.+++-.++.++|+
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred HHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 67899999999999999999999999 888888885 889998888888888775
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=4.2e-06 Score=92.84 Aligned_cols=70 Identities=23% Similarity=0.304 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++...+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++|+
T Consensus 216 ~K~~~~~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQ-LNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 588888887765 4556677899999999999999999999999 888999999999999888889988876
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.33 E-value=7e-07 Score=95.27 Aligned_cols=129 Identities=23% Similarity=0.326 Sum_probs=93.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 156 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--IAGDDSV------------------------- 156 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--EECTTTS-------------------------
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--EEeCCCC-------------------------
Confidence 4688999999999999999999999999999999999998422111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHHHHh-ccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKE-ASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~ak~-aaDiil~d~~f~~i~~ 794 (1119)
. ....|..+++.+.+. ++...+.++++||+.||+.|++.|++ +++||.+..+..++ .+|+++. ++..+..
T Consensus 157 -~--~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~ 230 (237)
T 4ex6_A 157 -E--RGKPHPDMALHVARG-LGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVT 230 (237)
T ss_dssp -S--SCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHH
T ss_pred -C--CCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHH
Confidence 0 012233444444333 36666789999999999999999999 99998444355554 8999997 7999988
Q ss_pred HHHHHH
Q psy10301 795 AVMWGR 800 (1119)
Q Consensus 795 ~i~~GR 800 (1119)
+++.|+
T Consensus 231 ~l~~~~ 236 (237)
T 4ex6_A 231 AVLDGH 236 (237)
T ss_dssp HHHHC-
T ss_pred HHHccC
Confidence 887654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.33 E-value=5.6e-07 Score=99.36 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhhcC-CCCCE--EEEEcCCcCCHHhhhcCCceEEEccCcc---HHHHhc--cC-eeeccCChhHHHHHH
Q psy10301 726 DKYTLVKGMIDSKIS-AGREV--VAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEA--SD-IILTDDNFSSIVKAV 796 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~-~~~~~--V~~iGDG~ND~~aLk~AdVGiamg~~g~---~~ak~a--aD-iil~d~~f~~i~~~i 796 (1119)
+|...++.+.+. ++ ...+. ++++||+.||.+|++.|++|++|| ++. +..++. || +++.+++-.++.++|
T Consensus 189 ~K~~~l~~l~~~-~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l 266 (275)
T 1xvi_A 189 GKDQAANWIIAT-YQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGL 266 (275)
T ss_dssp CHHHHHHHHHHH-HHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC-----------------------------
T ss_pred CHHHHHHHHHHH-hhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHH
Confidence 688888887655 23 23344 899999999999999999999999 776 455543 78 888877888888777
Q ss_pred H
Q psy10301 797 M 797 (1119)
Q Consensus 797 ~ 797 (1119)
+
T Consensus 267 ~ 267 (275)
T 1xvi_A 267 D 267 (275)
T ss_dssp -
T ss_pred H
Confidence 5
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.4e-06 Score=89.34 Aligned_cols=126 Identities=13% Similarity=0.196 Sum_probs=87.4
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEE----EecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI----LEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~----l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. ..++. ..... .
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------------------~ 138 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPR--ENIFAVETIWNSDG----------------------S 138 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCG--GGEEEEEEEECTTS----------------------B
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCc--ccEEEeeeeecCCC----------------------c
Confidence 78999999999999999999999999999999999999832 11111 00000 0
Q ss_pred eEEE--EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhc----CCceEEEccCccHHHHhccCeeeccCCh
Q psy10301 716 LRVL--ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK----ADVGFAMGITGTDVAKEASDIILTDDNF 789 (1119)
Q Consensus 716 ~~v~--ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~----AdVGiamg~~g~~~ak~aaDiil~d~~f 789 (1119)
..-+ ...+|..|...+... ++...+.++++||+.||.+|++. +.++++|+ +..+..+..||+++. ++
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~ 211 (219)
T 3kd3_A 139 FKELDNSNGACDSKLSAFDKA----KGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NV 211 (219)
T ss_dssp EEEEECTTSTTTCHHHHHHHH----GGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SH
T ss_pred eeccCCCCCCcccHHHHHHHH----hCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CH
Confidence 0001 122455565555443 34456789999999999999965 34444444 456778889999987 67
Q ss_pred hHHHHHH
Q psy10301 790 SSIVKAV 796 (1119)
Q Consensus 790 ~~i~~~i 796 (1119)
..+.+++
T Consensus 212 ~el~~~l 218 (219)
T 3kd3_A 212 AELASLI 218 (219)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7776654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=4.9e-07 Score=94.52 Aligned_cols=128 Identities=13% Similarity=0.081 Sum_probs=94.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC-ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+ .. ++.+..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~-i~~~~~------------------------- 123 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD-VLGRDE------------------------- 123 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-EECTTT-------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-EEeCCC-------------------------
Confidence 457899999999999999999999999999999999999842110 00 000000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc-eEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV-Giamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
.. ..-|..+++.+.+. ++...+.++++||+.||..|.+.|++ +|+|+ ++.+..++.||+++. ++..+...+
T Consensus 124 --~~--~kp~~~~~~~~~~~-~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~ 195 (205)
T 3m9l_A 124 --AP--PKPHPGGLLKLAEA-WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLL 195 (205)
T ss_dssp --SC--CTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHH
T ss_pred --CC--CCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHH
Confidence 00 11123344444333 35566789999999999999999999 99999 777777888999997 889998888
Q ss_pred HHHH
Q psy10301 797 MWGR 800 (1119)
Q Consensus 797 ~~GR 800 (1119)
...|
T Consensus 196 ~~~~ 199 (205)
T 3m9l_A 196 SAEG 199 (205)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 7544
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.20 E-value=4.1e-06 Score=91.42 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.|...++.+.+. ++...+.++++||+.||.+|++.|++|++|| ++.+..+..||+++.+.+-.++.++++
T Consensus 187 ~K~~~~~~~~~~-~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRH-FGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence 788888887765 4556677899999999999999999999999 888888999999998777677888775
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=3.8e-06 Score=91.62 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHhhcCCCC--CEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGR--EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~--~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.+|...++.+.++ ++... +.++++||+.||.+|++.|++|++|| ++.+ . +++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~-~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRAL-WPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHT-CSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 6899999998764 34444 77999999999999999999999999 7777 4 7789988887788877765
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.6e-06 Score=88.84 Aligned_cols=124 Identities=13% Similarity=0.168 Sum_probs=93.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. .+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------~~ 133 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------IV 133 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee--------------------------------ee
Confidence 5789999999999999999999999999999999999998421111 11
Q ss_pred EEecC--hhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHH-HHhccCeeeccCChhHH
Q psy10301 719 LARSS--PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDV-AKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~s--P~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~-ak~aaDiil~d~~f~~i 792 (1119)
.+... ...|...++.+.+. ++...+.++++||+.||..|.+.|++ +++||....+. .+..+|+++. ++..+
T Consensus 134 ~~~~~~~~kp~~~~~~~~~~~-lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el 210 (226)
T 3mc1_A 134 GSSLDGKLSTKEDVIRYAMES-LNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDEL 210 (226)
T ss_dssp EECTTSSSCSHHHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHH-hCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHH
Confidence 11111 23355666666554 35666789999999999999999999 88888333333 3688999997 78888
Q ss_pred HHHHH
Q psy10301 793 VKAVM 797 (1119)
Q Consensus 793 ~~~i~ 797 (1119)
..++.
T Consensus 211 ~~~~~ 215 (226)
T 3mc1_A 211 HKKIL 215 (226)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.4e-06 Score=94.51 Aligned_cols=60 Identities=30% Similarity=0.278 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHhhcCC-CCCEEEEEcCCcCCHHhhhcCCceEEEccCcc-HHHHhccCeeecc
Q psy10301 725 SDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADVGFAMGITGT-DVAKEASDIILTD 786 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~-~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~-~~ak~aaDiil~d 786 (1119)
.+|...++.+.+. ++. ..+.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~-~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDF-YKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHH-HHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHH-hccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 4699999998765 233 4678999999999999999999999999 777 6678889988763
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=3.5e-06 Score=88.54 Aligned_cols=120 Identities=14% Similarity=0.201 Sum_probs=84.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.+++.|+++.++|+.....+..+.+..|+...-+.. +.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--~~----------------------------- 142 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--AS----------------------------- 142 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EE-----------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE--Ee-----------------------------
Confidence 45789999999999999999999999998888888888874211111 11
Q ss_pred EEecChhh--HHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE----ccCccHHHHhccCeeeccCChhHH
Q psy10301 719 LARSSPSD--KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~sP~~--K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam----g~~g~~~ak~aaDiil~d~~f~~i 792 (1119)
+...+.. |...++.+.+. ++...+.++++||+.||.+|++.|+++++| + ++.+..+..||+++. ++..+
T Consensus 143 -~~~~~~~kp~~~~~~~~~~~-~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el 217 (226)
T 1te2_A 143 -AEKLPYSKPHPQVYLDCAAK-LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTEL 217 (226)
T ss_dssp -CTTSSCCTTSTHHHHHHHHH-HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGC
T ss_pred -ccccCCCCCChHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHH
Confidence 1111111 13444444333 355667789999999999999999999999 5 444556788999987 45554
Q ss_pred HH
Q psy10301 793 VK 794 (1119)
Q Consensus 793 ~~ 794 (1119)
..
T Consensus 218 ~~ 219 (226)
T 1te2_A 218 TA 219 (226)
T ss_dssp CH
T ss_pred hH
Confidence 43
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.07 E-value=5.7e-06 Score=91.69 Aligned_cols=71 Identities=21% Similarity=0.297 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
..|...++.+.+. ++...+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++|+
T Consensus 210 ~~k~~~~~~~~~~-~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 210 TGKNEIVTFMLEK-YNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 4688888888765 4555667899999999999999999999999 888999999999999877778887775
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1.7e-05 Score=82.61 Aligned_cols=128 Identities=11% Similarity=0.075 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-.+.+.. +.+. ....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~-~~~~---------------------~~~~ 125 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI-DDSD---------------------RVVG 125 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE-CTTS---------------------CEEE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEE-cCCc---------------------eEEe
Confidence 5799999999999999 999999999999999999999984210011111 1110 0000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHh-ccCeeeccCChhHHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKE-ASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~-aaDiil~d~~f~~i~~~i~ 797 (1119)
.-.-.|+.|...++.+. ...+.++++||+.||++|.+.|+++++++ . .+..++ +.+++ ..+++..+..++.
T Consensus 126 ~~~p~p~~~~~~l~~l~-----~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~-~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 126 YQLRQKDPKRQSVIAFK-----SLYYRVIAAGDSYNDTTMLSEAHAGILFH-A-PENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp EECCSSSHHHHHHHHHH-----HTTCEEEEEECSSTTHHHHHHSSEEEEES-C-CHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred eecCCCchHHHHHHHHH-----hcCCEEEEEeCChhhHHHHHhcCccEEEC-C-cHHHHHHHhhhc-cccchHHHHHHHH
Confidence 11246888998888763 24568999999999999999999999985 3 444444 44543 2347888877664
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.9e-05 Score=83.89 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=77.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+......+ .-.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~g~~ 150 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRY---------------------TGRI 150 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEE---------------------EEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEE---------------------eeee
Confidence 4799999999999999999999999999999999999998310000000000000 0001
Q ss_pred E-EecChhhHHHHHHHHHHhhcC---CCCCEEEEEcCCcCCHHhhhcCCceEEEc
Q psy10301 719 L-ARSSPSDKYTLVKGMIDSKIS---AGREVVAVTGDGTNDGPALKKADVGFAMG 769 (1119)
Q Consensus 719 ~-ar~sP~~K~~iV~~l~~~~~~---~~~~~V~~iGDG~ND~~aLk~AdVGiamg 769 (1119)
. ..+.+..|...++.+.+. ++ ...+.++++||+.||.+|++.|++++++.
T Consensus 151 ~~~~~~~~~K~~~~~~~~~~-~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 151 EGTPSFREGKVVRVNQWLAG-MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp ESSCSSTHHHHHHHHHHHHH-TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCCcchHHHHHHHHHHHH-cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 1 112346788777776543 23 34578999999999999999999999985
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.2e-06 Score=87.84 Aligned_cols=127 Identities=14% Similarity=0.095 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-+. ++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 143 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IVTRDDV------------------------- 143 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EECGGGS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--eeccccC-------------------------
Confidence 4678999999999999999999999999999999999998432111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHHHHhc-cCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKEA-SDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~ak~a-aDiil~d~~f~~i~~ 794 (1119)
. ....|..+++.+.+. ++...+.++++||+.||..|.+.|++ ++++|.+..+..++. +|+++. ++..+..
T Consensus 144 -~--~~kp~~~~~~~~~~~-l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~ 217 (233)
T 3s6j_A 144 -S--YGKPDPDLFLAAAKK-IGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLN 217 (233)
T ss_dssp -S--CCTTSTHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHH
T ss_pred -C--CCCCChHHHHHHHHH-hCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHH
Confidence 0 012233444444433 35566778999999999999999999 666664455555554 999997 7888888
Q ss_pred HHHH
Q psy10301 795 AVMW 798 (1119)
Q Consensus 795 ~i~~ 798 (1119)
.++.
T Consensus 218 ~l~~ 221 (233)
T 3s6j_A 218 HLDE 221 (233)
T ss_dssp TGGG
T ss_pred HHHH
Confidence 7764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.3e-05 Score=84.94 Aligned_cols=131 Identities=16% Similarity=0.233 Sum_probs=88.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. +.++... -.+. ....+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~~~f~~~-~~~~-------------------~~~~~ 143 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA--TNVFANR-LKFY-------------------FNGEY 143 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG--GGEEEEC-EEEC-------------------TTSCE
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc--ccEEeee-EEEc-------------------CCCcE
Confidence 689999999999999999999999999999999999999842 1111000 0000 00001
Q ss_pred EEe------cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc-cHHHHhccCeeeccCChhH
Q psy10301 719 LAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar------~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g-~~~ak~aaDiil~d~~f~~ 791 (1119)
.+. +.+..|..+++.+.+. ++. +.++++||+.||..|.+.|+++|++|... .+.....+|+++. ++..
T Consensus 144 ~~~~~~~~~~~~~~Kp~~~~~~~~~-~~~--~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~e 218 (225)
T 1nnl_A 144 AGFDETQPTAESGGKGKVIKLLKEK-FHF--KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 218 (225)
T ss_dssp EEECTTSGGGSTTHHHHHHHHHHHH-HCC--SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ecCCCCCcccCCCchHHHHHHHHHH-cCC--CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHH
Confidence 111 1134677777766544 233 56899999999999999999988887322 2344556899887 6666
Q ss_pred HHHHH
Q psy10301 792 IVKAV 796 (1119)
Q Consensus 792 i~~~i 796 (1119)
+..++
T Consensus 219 l~~~l 223 (225)
T 1nnl_A 219 LLGEL 223 (225)
T ss_dssp GCC--
T ss_pred HHHHH
Confidence 55443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.93 E-value=7.3e-06 Score=85.97 Aligned_cols=123 Identities=19% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEE
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 719 (1119)
+.|++.+.++.+++.|+++.++|+..........+.+|+...-+. ++.+.+.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------------------- 141 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--IIGGEDV-------------------------- 141 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EECGGGC--------------------------
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--eeehhhc--------------------------
Confidence 468999999999999999999999999888888888887422111 1111110
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE----ccCccHHHHhc-cCeeeccCChhHHHH
Q psy10301 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEA-SDIILTDDNFSSIVK 794 (1119)
Q Consensus 720 ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam----g~~g~~~ak~a-aDiil~d~~f~~i~~ 794 (1119)
....| |...++.+.+. ++...+.++++||+.||.+|++.|+++++| + +..+..+.. ||+++. ++..+..
T Consensus 142 ~~~k~--~~~~~~~~~~~-~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~ 215 (225)
T 3d6j_A 142 THHKP--DPEGLLLAIDR-LKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLIS 215 (225)
T ss_dssp SSCTT--STHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC-
T ss_pred CCCCC--ChHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHH
Confidence 00012 22333333333 355566788999999999999999999887 4 333444444 899987 5555555
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
.+
T Consensus 216 ~l 217 (225)
T 3d6j_A 216 VP 217 (225)
T ss_dssp --
T ss_pred hh
Confidence 44
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.92 E-value=6.5e-06 Score=86.31 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=78.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.+++.|+++.++|++ ..+..+.+.+|+...-+. ++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 141 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA--IADPAEV------------------------- 141 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE--ECCTTTS-------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce--EeccccC-------------------------
Confidence 46789999999999999999999998 455667777887321110 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~ 788 (1119)
....| |...++.+.+. ++...+.++++||+.||.+|++.|+++++|+ ++.+..+ .||+++.+.+
T Consensus 142 -~~~Kp--~~~~~~~~~~~-lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 142 -AASKP--APDIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTS 205 (221)
T ss_dssp -SSCTT--SSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGG
T ss_pred -CCCCC--ChHHHHHHHHH-cCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHH
Confidence 01112 12233333332 3556677899999999999999999999998 6777677 8999987543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=85.70 Aligned_cols=123 Identities=16% Similarity=0.173 Sum_probs=89.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.+ +
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------~ 157 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI--------------------------------A 157 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------E
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------E
Confidence 47899999999999999999999999999999999999984221111 1
Q ss_pred EEecC--hhhHHHHHHHHHHhhcCCC-CCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHH-HHhccCeeeccCChhH
Q psy10301 719 LARSS--PSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV---GFAMGITGTDV-AKEASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar~s--P~~K~~iV~~l~~~~~~~~-~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~-ak~aaDiil~d~~f~~ 791 (1119)
.+... ...|..+++.+.+. ++.. .+.++++||+.||..|.+.|++ ++++|....+. .+..+|+++. ++..
T Consensus 158 ~~~~~~~~kp~~~~~~~~~~~-~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~e 234 (240)
T 3sd7_A 158 GSNLDGTRVNKNEVIQYVLDL-CNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVES 234 (240)
T ss_dssp EECTTSCCCCHHHHHHHHHHH-HTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTT
T ss_pred eccccCCCCCCHHHHHHHHHH-cCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHH
Confidence 11111 22355566665544 3556 6788999999999999999999 77777323232 3578999998 6777
Q ss_pred HHHHH
Q psy10301 792 IVKAV 796 (1119)
Q Consensus 792 i~~~i 796 (1119)
+.++|
T Consensus 235 l~~~l 239 (240)
T 3sd7_A 235 IKDIL 239 (240)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.5e-05 Score=84.20 Aligned_cols=126 Identities=12% Similarity=0.168 Sum_probs=89.3
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~----------------------- 149 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--LISVDEVR----------------------- 149 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEGGGTT-----------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce--eEehhhcc-----------------------
Confidence 35789999999999999999999999999999999999998422111 11111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc---CccHHHHhccCeeeccCChhHHHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI---TGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~---~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....|..+++.+.+. ++...+.++++||+.||+.|.+.|+++++|-. +..+..+..+|+++. ++..+..
T Consensus 150 -----~~kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~ 221 (230)
T 3um9_A 150 -----LFKPHQKVYELAMDT-LHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLAS 221 (230)
T ss_dssp -----CCTTCHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHH
T ss_pred -----cCCCChHHHHHHHHH-hCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHH
Confidence 011223444444333 35566778999999999999999999999931 344455678999988 7777766
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
.+
T Consensus 222 ~l 223 (230)
T 3um9_A 222 RF 223 (230)
T ss_dssp TC
T ss_pred HH
Confidence 54
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=86.91 Aligned_cols=126 Identities=14% Similarity=0.155 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+...-.+. +..+.+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~------------------------- 156 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDV------------------------- 156 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGS-------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh-eecCCcc-------------------------
Confidence 46789999999999999999999999998888888888763211010 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCC-CEEEEEcCCcCCHHhhhcCC---ceEEEccCc----------------------
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKAD---VGFAMGITG---------------------- 772 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~-~~V~~iGDG~ND~~aLk~Ad---VGiamg~~g---------------------- 772 (1119)
.. ...|...++.+.+. ++... +.++++||+.||..|++.|+ +++++| ++
T Consensus 157 -~~--~kp~~~~~~~~~~~-lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T 1swv_A 157 -PA--GRPYPWMCYKNAME-LGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIE 231 (267)
T ss_dssp -SC--CTTSSHHHHHHHHH-HTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHH
T ss_pred -CC--CCCCHHHHHHHHHH-hCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhh
Confidence 00 11133344444333 35555 67899999999999999999 677777 33
Q ss_pred --cHHHHhc-cCeeeccCChhHHHHHHH
Q psy10301 773 --TDVAKEA-SDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 773 --~~~ak~a-aDiil~d~~f~~i~~~i~ 797 (1119)
.+..+++ ||+++. ++..+..++.
T Consensus 232 ~~~~~~~~~~ad~v~~--~~~el~~~l~ 257 (267)
T 1swv_A 232 VVRNRFVENGAHFTIE--TMQELESVME 257 (267)
T ss_dssp HHHHHHHHTTCSEEES--SGGGHHHHHH
T ss_pred hHHHHHHhcCCceecc--CHHHHHHHHH
Confidence 2334444 999986 6778777664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-05 Score=83.21 Aligned_cols=119 Identities=16% Similarity=0.129 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+.|++.+.++.|++.|+++.++|+....... ..+.+|+...-+ .++.+.+.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~------------------------- 136 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSG------------------------- 136 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGC-------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcC-------------------------
Confidence 36799999999999999999999999988887 878888732100 01111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
....|. ..+++.+.+. ++...+.++++||+.||.+|++.|+++ ++|+ ++. . .+|+++. ++..+..++
T Consensus 137 -~~~Kp~--~~~~~~~~~~-~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 137 -FVRKPS--PEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp -CCCTTS--SHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred -CCCCCC--cHHHHHHHHH-hCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 000111 2233333322 355667789999999999999999997 7787 555 2 6888886 566666544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.2e-05 Score=81.91 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-+. ++.+.+.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~--i~~~~~~------------------------- 142 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA--IVDPTTL------------------------- 142 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE--ECCC----------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE--EeeHhhC-------------------------
Confidence 3689999999999999999999999754 7778888887422111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDD 787 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~ 787 (1119)
.+..| |..+++.+.+. ++...+.++++||+.||+.|.+.|+++++|. ++.+..+ .||+++.+.
T Consensus 143 -~~~Kp--~~~~~~~~~~~-lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 143 -AKGKP--DPDIFLTAAAM-LDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQT 205 (233)
T ss_dssp ---------CCHHHHHHHH-HTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSG
T ss_pred -CCCCC--ChHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCCh
Confidence 01111 12233333222 3556678899999999999999999999998 5655555 899998743
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.81 E-value=6e-05 Score=79.71 Aligned_cols=124 Identities=18% Similarity=0.208 Sum_probs=89.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~~~~~~------------------------ 152 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITTSEEAG------------------------ 152 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEHHHHT------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEeccccC------------------------
Confidence 5679999999999999 99999999999999999999998432111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCC---ceEEEccCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKAD---VGFAMGITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~Ad---VGiamg~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
...| |..+++.+.+. ++...+.++++||+. ||..|.+.|+ +++++| ++.+..++.+|+++. ++..+..
T Consensus 153 --~~kp--~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~ 224 (234)
T 3u26_A 153 --FFKP--HPRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIK 224 (234)
T ss_dssp --BCTT--SHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHH
T ss_pred --CCCc--CHHHHHHHHHH-cCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHH
Confidence 0112 22333333332 355667899999997 9999999999 677777 666667779999998 7888887
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
.+.
T Consensus 225 ~l~ 227 (234)
T 3u26_A 225 IVD 227 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.80 E-value=5.1e-05 Score=80.11 Aligned_cols=124 Identities=12% Similarity=0.131 Sum_probs=85.2
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDN---INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~---~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
+.|++.+.++.|++.|+++.++|+.. ...+..+.+.+|+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~---------------------- 155 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFFADEVL---------------------- 155 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEEHHHHT----------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--heeccccC----------------------
Confidence 47999999999999999999999999 8888888888887422111 11111110
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEE---ccCccHHHHhccCeeeccCChhHH
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiam---g~~g~~~ak~aaDiil~d~~f~~i 792 (1119)
...| |..+.+.+.+. ++...+.++++||+. ||..|.+.|+++++| | +..+..+..+|+++. ++..+
T Consensus 156 ----~~kp--~~~~~~~~~~~-lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el 225 (235)
T 2om6_A 156 ----SYKP--RKEMFEKVLNS-FEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANL 225 (235)
T ss_dssp ----CCTT--CHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGH
T ss_pred ----CCCC--CHHHHHHHHHH-cCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHH
Confidence 0112 22334444333 355667899999999 999999999999999 4 333334456788876 67777
Q ss_pred HHHHH
Q psy10301 793 VKAVM 797 (1119)
Q Consensus 793 ~~~i~ 797 (1119)
..++.
T Consensus 226 ~~~l~ 230 (235)
T 2om6_A 226 KDVIE 230 (235)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.1e-05 Score=83.39 Aligned_cols=126 Identities=8% Similarity=0.038 Sum_probs=91.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 152 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVDAVR------------------------ 152 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGGGTT------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEecccC------------------------
Confidence 5679999999999999999999999999999999999998432221 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE----ccCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam----g~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
...| |..+++.+.+. ++...+.++++||+.||+.|.+.|+++++| + +..+..+..+|+++. ++..+..
T Consensus 153 --~~kp--~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~ 224 (233)
T 3umb_A 153 --LYKT--APAAYALAPRA-FGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQ 224 (233)
T ss_dssp --CCTT--SHHHHTHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHH
T ss_pred --CCCc--CHHHHHHHHHH-hCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHH
Confidence 0012 22233333322 355567788999999999999999999999 5 455556778999998 8888888
Q ss_pred HHHH
Q psy10301 795 AVMW 798 (1119)
Q Consensus 795 ~i~~ 798 (1119)
++..
T Consensus 225 ~l~~ 228 (233)
T 3umb_A 225 FVQA 228 (233)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8763
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.78 E-value=4e-05 Score=80.64 Aligned_cols=119 Identities=8% Similarity=0.040 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aG-I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.| +++.++|+........+.+.+|+...-+ .
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------~ 151 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------H 151 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS---------------------------------E
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh---------------------------------e
Confidence 46789999999999999 9999999999888888889998832111 1
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEcc------CccHHHHhc-cCeeeccCCh
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGI------TGTDVAKEA-SDIILTDDNF 789 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~------~g~~~ak~a-aDiil~d~~f 789 (1119)
+++...| |...++.+.+. ++...+.++++||+. ||..|.+.|+++.+|=. ++....+.. +|+++. ++
T Consensus 152 ~~~~~kp--k~~~~~~~~~~-lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l 226 (234)
T 3ddh_A 152 IEVMSDK--TEKEYLRLLSI-LQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RL 226 (234)
T ss_dssp EEEESCC--SHHHHHHHHHH-HTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SG
T ss_pred eeecCCC--CHHHHHHHHHH-hCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cH
Confidence 2233233 56666666554 466677899999996 99999999999988721 222222333 488887 67
Q ss_pred hHHHHH
Q psy10301 790 SSIVKA 795 (1119)
Q Consensus 790 ~~i~~~ 795 (1119)
..+..+
T Consensus 227 ~el~~~ 232 (234)
T 3ddh_A 227 DDLLSL 232 (234)
T ss_dssp GGHHHH
T ss_pred HHHHHh
Confidence 776654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.8e-05 Score=87.11 Aligned_cols=129 Identities=10% Similarity=0.048 Sum_probs=88.7
Q ss_pred CCCccHHHHHHHHHHcCC--EEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 639 PVRPEVPEAIKKCQRAGI--TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI--~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-+.+ +.+.+.. .
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v--~~~~~~~-------------------~-- 198 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL--TYCDYSR-------------------T-- 198 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE--ECCCCSS-------------------C--
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE--EEeccCC-------------------C--
Confidence 578999999999999999 99999999999999999999984321111 1110000 0
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCC-CEEEEEcCCcCCHHhhhcCCceEEEccCccHH-----HHhccCeeeccCChh
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFAMGITGTDV-----AKEASDIILTDDNFS 790 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~-~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~-----ak~aaDiil~d~~f~ 790 (1119)
.. ..+..|..+++.+.+. ++... +.++++||+.||..|.+.|++|.+|+...... ....+|+++. ++.
T Consensus 199 -~~--~~~Kp~~~~~~~~~~~-lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~ 272 (282)
T 3nuq_A 199 -DT--LVCKPHVKAFEKAMKE-SGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DIL 272 (282)
T ss_dssp -SS--CCCTTSHHHHHHHHHH-HTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGG
T ss_pred -cc--cCCCcCHHHHHHHHHH-cCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHH
Confidence 00 1123355556555544 35665 78999999999999999999999998443321 1337888887 666
Q ss_pred HHHHHH
Q psy10301 791 SIVKAV 796 (1119)
Q Consensus 791 ~i~~~i 796 (1119)
.+..++
T Consensus 273 el~~~l 278 (282)
T 3nuq_A 273 ELPHVV 278 (282)
T ss_dssp GGGGTS
T ss_pred HHHHHh
Confidence 655443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.76 E-value=4.6e-05 Score=80.61 Aligned_cols=126 Identities=12% Similarity=0.077 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~a-GI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+...-+. ...+.+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 146 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------ 146 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ceecCCC------------------------
Confidence 3679999999999999 999999999999999999899988421111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcC--CCCCEEEEEcCCcCCHHhhhcCC---ceEEEccCccHHHHh-ccCeeeccCChhH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKE-ASDIILTDDNFSS 791 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~--~~~~~V~~iGDG~ND~~aLk~Ad---VGiamg~~g~~~ak~-aaDiil~d~~f~~ 791 (1119)
...|.-+..+++.+.+. ++ ...+.++++||+.||..|.+.|+ +++++|....+..+. .+|+++. ++..
T Consensus 147 ---~~~~k~~~~~~~~~~~~-lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~e 220 (234)
T 2hcf_A 147 ---LDRNELPHIALERARRM-TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAE 220 (234)
T ss_dssp ---SSGGGHHHHHHHHHHHH-HCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCC
T ss_pred ---cCccchHHHHHHHHHHH-hCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHh
Confidence 00122233344444332 34 45567899999999999999999 555555222223322 3899887 4555
Q ss_pred HHHHH
Q psy10301 792 IVKAV 796 (1119)
Q Consensus 792 i~~~i 796 (1119)
+...+
T Consensus 221 l~~~l 225 (234)
T 2hcf_A 221 TDEVL 225 (234)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.8e-05 Score=82.05 Aligned_cols=122 Identities=14% Similarity=0.171 Sum_probs=84.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 142 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLSGEEFK------------------------ 142 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGCS------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eeeccccc------------------------
Confidence 4688999999999999999999999999999999999998432121 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc-cHHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g-~~~ak~aaDiil~d~~f~~i~ 793 (1119)
...| |...++.+.+. ++...+.++++||+.||..|.+.|+++++|..++ ....+..+|+++. ++..+.
T Consensus 143 --~~kp--~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 143 --ESKP--NPEIYLTALKQ-LNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp --SCTT--SSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred --CCCC--ChHHHHHHHHH-cCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 0112 22333333332 3556677899999999999999999999886433 3344577899887 555443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.6e-05 Score=91.68 Aligned_cols=112 Identities=21% Similarity=0.295 Sum_probs=76.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcC--CCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK--PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~--~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
.++|++.+.|+.|+++|++|+++||.....++.+|+++|+.- +.++++.. ++. .++++
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~---~l~---~~~dG-------------- 280 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL---RLM---KDDEG-------------- 280 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEE---CEE---ECTTC--------------
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEe---EEE---EecCC--------------
Confidence 478999999999999999999999999999999999998731 22222211 110 00011
Q ss_pred EEEEe-------cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhc-CCceEEEccCc
Q psy10301 717 RVLAR-------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK-ADVGFAMGITG 772 (1119)
Q Consensus 717 ~v~ar-------~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~-AdVGiamg~~g 772 (1119)
.+..+ +..+.|...++.+.... .....++++|||.||.+||+. +|.++++.++.
T Consensus 281 ~~tg~~~~~~p~~~~~gK~~~i~~~~~~~--~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 281 KILPKFDKDFPISIREGKVQTINKLIKND--RNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp CEEEEECTTSCCCSTHHHHHHHHHHTCCT--TEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred ceeeeecCccceeCCCchHHHHHHHHHhc--CCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 11111 23567999888764321 122347778999999999986 67777766553
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.74 E-value=5.3e-05 Score=81.13 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=88.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+++|+++.++|+.....+..+.+ |+... +.++.-+. ... .+.+.. .+ --+.-..
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~-~~~------~~~~~~-~~--~kp~p~~ 143 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHA-SFD------NDYIHI-DW--PHSCKGT 143 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEE-ECS------SSBCEE-EC--TTCCCTT
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeee-EEc------CCceEE-ec--CCCCccc
Confidence 689999999999999999999999999988888887 77432 32222110 000 000000 00 0000000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhc--cCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA--SDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~a--aDiil~d~~f~~i~~~i 796 (1119)
+-+.....|..+++.+ +...+.++++||+.||+++.+.|++.++.+ ...+..... +|+++. ++..+...+
T Consensus 144 ~~~~~~~~K~~~~~~~-----~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l 215 (236)
T 2fea_A 144 CSNQCGCCKPSVIHEL-----SEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEI 215 (236)
T ss_dssp CCSCCSSCHHHHHHHH-----CCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHH
T ss_pred cccccCCcHHHHHHHH-----hccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHH
Confidence 0011245687887765 566788999999999999999999998753 222233333 677776 788888776
Q ss_pred HH
Q psy10301 797 MW 798 (1119)
Q Consensus 797 ~~ 798 (1119)
..
T Consensus 216 ~~ 217 (236)
T 2fea_A 216 EN 217 (236)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.73 E-value=3.2e-05 Score=84.20 Aligned_cols=127 Identities=9% Similarity=0.010 Sum_probs=87.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.....+. +..+.+..
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~------------------------ 165 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPAS-TVFATDVV------------------------ 165 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSE-EECGGGSS------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCce-EecHHhcC------------------------
Confidence 56789999999999999999999999999999998888874321111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCC-CEEEEEcCCcCCHHhhhcCC---ceEEEccC-----------------------
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKAD---VGFAMGIT----------------------- 771 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~-~~V~~iGDG~ND~~aLk~Ad---VGiamg~~----------------------- 771 (1119)
....|..+++.+.+. ++... +.++++||+.||+.|.+.|+ |++++|.+
T Consensus 166 ----~~kp~~~~~~~~~~~-lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T 3iru_A 166 ----RGRPFPDMALKVALE-LEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQH 240 (277)
T ss_dssp ----SCTTSSHHHHHHHHH-HTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHH-cCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhh
Confidence 012233344444433 36666 78999999999999999999 56777632
Q ss_pred ccHHHH-hccCeeeccCChhHHHHHHH
Q psy10301 772 GTDVAK-EASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 772 g~~~ak-~aaDiil~d~~f~~i~~~i~ 797 (1119)
..+..+ ..+|+++. ++..+..++.
T Consensus 241 ~~~~l~~~~ad~v~~--~~~el~~~l~ 265 (277)
T 3iru_A 241 AEQRLFNAGAHYVID--SVADLETVIT 265 (277)
T ss_dssp HHHHHHHHTCSEEES--SGGGTHHHHH
T ss_pred hHHHHhhCCCCEEec--CHHHHHHHHH
Confidence 123333 34999998 7888877765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.71 E-value=8.2e-05 Score=78.71 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.+ +
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i--------------------------------~ 150 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI--------------------------------I 150 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------E
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------E
Confidence 46899999999999999999999999999999999999984211111 1
Q ss_pred EEecChhh--HHHHHHHHHHhhcCCCCC-EEEEEcCCcCCHHhhhcCCc-eEEEccCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSD--KYTLVKGMIDSKISAGRE-VVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~--K~~iV~~l~~~~~~~~~~-~V~~iGDG~ND~~aLk~AdV-Giamg~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
.+...+.. |...++.+.+. ++...+ .++++||+.||+.|.+.|++ ++.++ ++.+ ..+|+++. ++..+..
T Consensus 151 ~~~~~~~~Kp~~~~~~~~~~~-lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~ 223 (231)
T 3kzx_A 151 GSGDTGTIKPSPEPVLAALTN-INIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRN 223 (231)
T ss_dssp EETSSSCCTTSSHHHHHHHHH-HTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHH
T ss_pred cccccCCCCCChHHHHHHHHH-cCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHH
Confidence 11111111 12233333322 355555 78899999999999999997 66676 4443 35677777 7888877
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
++.
T Consensus 224 ~l~ 226 (231)
T 3kzx_A 224 FIC 226 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=3e-05 Score=83.44 Aligned_cols=123 Identities=20% Similarity=0.274 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+ .++.+.+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~------------------------- 166 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSL------------------------- 166 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE--EEEecccC-------------------------
Confidence 578999999999999999999999999999999999999842111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE-Ec--cC-ccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MG--IT-GTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia-mg--~~-g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....|. ..+++.+.+. ++...+.++++||+.||++|.+.|+++++ +. .+ +.+..+..+|+++. ++..+..
T Consensus 167 -~~~Kp~--~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 167 -PEIKPH--PAPFYYLCGK-FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp -SSCTTS--SHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred -CCCCcC--HHHHHHHHHH-hCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 011121 2223332222 35556778999999999999999998854 32 11 23445678999986 5655543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00025 Score=75.73 Aligned_cols=125 Identities=13% Similarity=0.151 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 147 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEH--VIISDFEG------------------------ 147 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccE--EEEeCCCC------------------------
Confidence 4679999999999999999999999999888999999997421111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEE---ccCccHHHH---hccCeeeccCChhH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAK---EASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiam---g~~g~~~ak---~aaDiil~d~~f~~ 791 (1119)
...| |..+++.+.+. ++...+.++++||+. ||..|.+.|+++.++ | .+..... ..+|+++. ++..
T Consensus 148 --~~Kp--~~~~~~~~~~~-~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~e 219 (241)
T 2hoq_A 148 --VKKP--HPKIFKKALKA-FNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLES 219 (241)
T ss_dssp --CCTT--CHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTH
T ss_pred --CCCC--CHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHH
Confidence 0112 22333333332 355567789999998 999999999987664 3 2333333 26899887 6777
Q ss_pred HHHHHH
Q psy10301 792 IVKAVM 797 (1119)
Q Consensus 792 i~~~i~ 797 (1119)
+...+.
T Consensus 220 l~~~l~ 225 (241)
T 2hoq_A 220 LLEVLA 225 (241)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.64 E-value=6.5e-05 Score=79.48 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~------------------------- 135 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IVGGDTF------------------------- 135 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTSS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EEecCcC-------------------------
Confidence 5689999999999999999999999999999999999997421111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEcc-CccHHHHhccCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGI-TGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~-~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
. .+..|..+++.+.+. ++...+.++++||+.||.+|.+.|++. +++.. .+.... ..+|+++. ++..+...+
T Consensus 136 -~--~~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l 208 (222)
T 2nyv_A 136 -G--EKKPSPTPVLKTLEI-LGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLM 208 (222)
T ss_dssp -C--TTCCTTHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHH
T ss_pred -C--CCCCChHHHHHHHHH-hCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHH
Confidence 0 011223333333322 355567789999999999999999988 55541 122222 66888887 788887766
Q ss_pred H
Q psy10301 797 M 797 (1119)
Q Consensus 797 ~ 797 (1119)
.
T Consensus 209 ~ 209 (222)
T 2nyv_A 209 D 209 (222)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.60 E-value=8.8e-05 Score=75.58 Aligned_cols=126 Identities=14% Similarity=0.156 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCcCCCCceE-EEe-cHhHHHHhhcCc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYL-ILE-GKEFNRRVRDNN 701 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~---------------~ta~~ia~~~Gi~~~~~~~i-~l~-g~~~~~~~~~~~ 701 (1119)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|.. -+.++ +.. +.+-
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGV--VDAIFMCPHGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCC--CCEEEEECCCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCc--eeEEEEcCCCCCCC--------
Confidence 5789999999999999999999999985 4555666667610 01111 000 0000
Q ss_pred hhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHHHH-
Q psy10301 702 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAK- 777 (1119)
Q Consensus 702 ~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~ak- 777 (1119)
+....|. ..+.+.+.+. ++...+.++++||+.||..|.+.|++ ++++| .+.....
T Consensus 97 -----------------~~~~KP~--~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~ 155 (179)
T 3l8h_A 97 -----------------CACRKPL--PGMYRDIARR-YDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQ 155 (179)
T ss_dssp -----------------CSSSTTS--SHHHHHHHHH-HTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHH
T ss_pred -----------------CCCCCCC--HHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-Ccchhhhh
Confidence 0001122 2233333332 35566778999999999999999995 67666 4444333
Q ss_pred ---hccCeeeccCChhHHHHHHH
Q psy10301 778 ---EASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 778 ---~aaDiil~d~~f~~i~~~i~ 797 (1119)
..+|+++. ++..+...+.
T Consensus 156 ~~~~~~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 156 GGLPEGTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp CCCCTTEEEES--SHHHHHHHHH
T ss_pred cccCCCcEEec--CHHHHHHHHH
Confidence 45799988 7888877664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.59 E-value=8.2e-05 Score=80.40 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=86.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-+. .++.+.+..
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-~i~~~~~~~------------------------ 164 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-HIYDPSWVG------------------------ 164 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS-CEECGGGGT------------------------
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc-eEEeHhhcC------------------------
Confidence 4678999999999999999999999999999999999998311010 011111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCc-------cHH-HHhccCeeeccCCh
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITG-------TDV-AKEASDIILTDDNF 789 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g-------~~~-ak~aaDiil~d~~f 789 (1119)
.. ..-|..+++.+.+. ++...+.++++||+.||+.|.+.|+++ +.+. .| .+. .+..+|+++. ++
T Consensus 165 -~~--~Kp~~~~~~~~~~~-lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l 237 (259)
T 4eek_A 165 -GR--GKPHPDLYTFAAQQ-LGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SH 237 (259)
T ss_dssp -TC--CTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SH
T ss_pred -cC--CCCChHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CH
Confidence 00 11123334444333 356667899999999999999999998 4443 23 223 3345899998 78
Q ss_pred hHHHHHHHH
Q psy10301 790 SSIVKAVMW 798 (1119)
Q Consensus 790 ~~i~~~i~~ 798 (1119)
..+.+.+..
T Consensus 238 ~el~~~l~~ 246 (259)
T 4eek_A 238 AELRAALAE 246 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888888763
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00019 Score=75.82 Aligned_cols=124 Identities=7% Similarity=0.055 Sum_probs=87.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+ .|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 159 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK--IILSEDLG------------------------ 159 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEEGGGTT------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee--EEEeccCC------------------------
Confidence 46789999999999 9999999999999999999999998432111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCccH-HHHhccCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTD-VAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g~~-~ak~aaDiil~d~~f~~i~~~i 796 (1119)
....|..+++.+.+. ++...+.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++. ++..+..+.
T Consensus 160 ----~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~ 232 (240)
T 3qnm_A 160 ----VLKPRPEIFHFALSA-TQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL 232 (240)
T ss_dssp ----CCTTSHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred ----CCCCCHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence 012234444444433 456667899999995 999999999999999844432 45667999998 677766553
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=78.65 Aligned_cols=124 Identities=11% Similarity=0.117 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 158 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLSADDLK------------------------ 158 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGTT------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEEccccC------------------------
Confidence 5789999999999999999999999999999999999998432111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE---EccCccHHHHhcc-CeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA---MGITGTDVAKEAS-DIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia---mg~~g~~~ak~aa-Diil~d~~f~~i~~ 794 (1119)
...| |..+++.+.+. ++...+.++++||+.||+.|.+.|++..+ .| .+.+..+..+ |+++. ++..+..
T Consensus 159 --~~Kp--~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~ 230 (240)
T 2no4_A 159 --IYKP--DPRIYQFACDR-LGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWP 230 (240)
T ss_dssp --CCTT--SHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHH
T ss_pred --CCCC--CHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHH
Confidence 0112 22333333322 35555678899999999999999996544 34 2223334456 88887 6777766
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
.+
T Consensus 231 ~l 232 (240)
T 2no4_A 231 LL 232 (240)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=76.79 Aligned_cols=120 Identities=12% Similarity=0.141 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...-+. .+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~--------------------------------i~ 130 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------IY 130 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee--------------------------------ee
Confidence 467999999999999 999999999998888888889998421111 11
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHHHH-hccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAK-EASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~ak-~aaDiil~d~~f~~i~~ 794 (1119)
.+...+.-|..+.+.+.+. ++...+.++++||+.||+.|.+.|++ ++++|....+..+ ..+|+++. ++..+..
T Consensus 131 ~~~~~~Kp~p~~~~~~~~~-lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 131 GSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp EECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred cCCCCCCCChHHHHHHHHH-cCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 1221223455666665544 45566779999999999999999998 7777732233333 36899887 5666554
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00011 Score=78.27 Aligned_cols=126 Identities=13% Similarity=0.049 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC-ceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+...-. +. ++.+.+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~-~~~~~~~----------------------- 161 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL-MVTAFDV----------------------- 161 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-EECGGGC-----------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-EEecccC-----------------------
Confidence 35789999999999999999999999988777777777 7742110 11 1111110
Q ss_pred EEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE-EEccCccHH----HHhccCeeeccCChhH
Q psy10301 717 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGTDV----AKEASDIILTDDNFSS 791 (1119)
Q Consensus 717 ~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi-amg~~g~~~----ak~aaDiil~d~~f~~ 791 (1119)
.. ..-|..+++.+.+. ++...+.++++||+.||+.|.+.|+++. .+. .|... .+..+|+++. ++..
T Consensus 162 ---~~--~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~e 232 (247)
T 3dv9_A 162 ---KY--GKPNPEPYLMALKK-GGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPD 232 (247)
T ss_dssp ---SS--CTTSSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHH
T ss_pred ---CC--CCCCCHHHHHHHHH-cCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHH
Confidence 00 11122333333332 3566677899999999999999999653 333 33222 2347999998 7888
Q ss_pred HHHHHH
Q psy10301 792 IVKAVM 797 (1119)
Q Consensus 792 i~~~i~ 797 (1119)
+..++.
T Consensus 233 l~~~l~ 238 (247)
T 3dv9_A 233 FNKNWE 238 (247)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877665
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0001 Score=78.75 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCC-ceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...-. +. ++.+.+.
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~-i~~~~~~------------------------ 162 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKEL-MVTAFDV------------------------ 162 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGG-EECTTTC------------------------
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcce-EEeHHhC------------------------
Confidence 5779999999999999999999999987777777666 7742110 11 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE-EccCccHH----HHhccCeeeccCChhHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITGTDV----AKEASDIILTDDNFSSI 792 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia-mg~~g~~~----ak~aaDiil~d~~f~~i 792 (1119)
....| |..+++.+.+. ++...+.++++||+.||+.|.+.|+++.+ +. .|... .+..+|+++. ++..+
T Consensus 163 --~~~kp--~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el 234 (243)
T 3qxg_A 163 --KYGKP--NPEPYLMALKK-GGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTL 234 (243)
T ss_dssp --SSCTT--SSHHHHHHHHH-TTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHH
T ss_pred --CCCCC--ChHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHH
Confidence 01112 22333333333 45666788999999999999999998544 43 44322 2346999997 78888
Q ss_pred HHHHH
Q psy10301 793 VKAVM 797 (1119)
Q Consensus 793 ~~~i~ 797 (1119)
..++.
T Consensus 235 ~~~l~ 239 (243)
T 3qxg_A 235 CDSWD 239 (243)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00033 Score=74.01 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=87.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 155 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--IFVSEDTG------------------------ 155 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE--EEEGGGTT------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe--EEEecccC------------------------
Confidence 5788999999999999 99999999999999999999998432111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcC-CCCCEEEEEcCCc-CCHHhhhcCCceEEEccCc--cHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKIS-AGREVVAVTGDGT-NDGPALKKADVGFAMGITG--TDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~-~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g--~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
....|..+++.+.+. ++ ...+.++++||+. ||+.|.+.|+++..+-..+ .+..+..+|+++. ++..+..
T Consensus 156 ----~~kp~~~~~~~~~~~-~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~ 228 (238)
T 3ed5_A 156 ----FQKPMKEYFNYVFER-IPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYH 228 (238)
T ss_dssp ----SCTTCHHHHHHHHHT-STTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHH
T ss_pred ----CCCCChHHHHHHHHH-cCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHH
Confidence 011234445555443 45 5567899999998 9999999999964433243 4456678999998 7888877
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
++.
T Consensus 229 ~l~ 231 (238)
T 3ed5_A 229 ILN 231 (238)
T ss_dssp HHT
T ss_pred HHH
Confidence 764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.49 E-value=2.1e-05 Score=82.02 Aligned_cols=118 Identities=12% Similarity=0.195 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+ .++.+.+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~-------------------------- 133 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADD-------------------------- 133 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGG--------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCc--------------------------
Confidence 4689999999999999 9999999999998888888888731100 1111111
Q ss_pred EEecChhhH--HHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc--C-ccHHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDK--YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI--T-GTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K--~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~--~-g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
....| ...++.+.+. ++...+.++++||+.||..|.+.|+++++|.. . ..+..++ +|+++. ++..+.
T Consensus 134 ----~~~~KP~~~~~~~~~~~-~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 134 ----TPKRKPDPLPLLTALEK-VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp ----SSCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred ----CCCCCCCcHHHHHHHHH-cCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 11123 3333333332 35566779999999999999999999999742 1 2334444 899886 455443
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.48 E-value=8.4e-05 Score=78.70 Aligned_cols=125 Identities=10% Similarity=0.180 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 148 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVDPVQ------------------------ 148 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESGGGT------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEEecccC------------------------
Confidence 4789999999999999999999999999999999999998422111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccC---ccHHHHhccCeeeccCChhHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT---GTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~---g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
...| |..+++.+.+. ++...+.++++||+.||..|.+.|++++++-.. ..+..+..+|+++. ++..+...
T Consensus 149 --~~Kp--~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 221 (232)
T 1zrn_A 149 --VYKP--DNRVYELAEQA-LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 221 (232)
T ss_dssp --CCTT--SHHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred --CCCC--CHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 0112 22233333222 244556788999999999999999999988322 22334566888886 67776655
Q ss_pred H
Q psy10301 796 V 796 (1119)
Q Consensus 796 i 796 (1119)
+
T Consensus 222 l 222 (232)
T 1zrn_A 222 F 222 (232)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00018 Score=76.98 Aligned_cols=123 Identities=11% Similarity=0.189 Sum_probs=82.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEE
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 719 (1119)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. . -+. ++.+.+..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f~~-~~~~~~~~------------------------- 162 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-FDF-ALGEKSGI------------------------- 162 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-CSE-EEEECTTS-------------------------
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-eeE-EEecCCCC-------------------------
Confidence 5689999999999999999999999988888888898873 2 111 11111100
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce---EEEccCccHHHH-hccCeeeccCChhHHHHH
Q psy10301 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTDVAK-EASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 720 ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG---iamg~~g~~~ak-~aaDiil~d~~f~~i~~~ 795 (1119)
.+.-|..++..+.+. ++...+.++++||+.||+.|.+.|++. +++|....+..+ ..+|+++. ++..+...
T Consensus 163 ---~~Kp~p~~~~~~~~~-l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~ 236 (240)
T 2hi0_A 163 ---RRKPAPDMTSECVKV-LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEA 236 (240)
T ss_dssp ---CCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHH
Confidence 112233334333332 355667899999999999999999984 445521213333 46898886 67777655
Q ss_pred H
Q psy10301 796 V 796 (1119)
Q Consensus 796 i 796 (1119)
+
T Consensus 237 l 237 (240)
T 2hi0_A 237 I 237 (240)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00014 Score=77.95 Aligned_cols=123 Identities=13% Similarity=0.133 Sum_probs=87.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -+. +..+.+..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~~------------------------ 170 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLFG------------------------ 170 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHHT------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeecccc------------------------
Confidence 4578999999999985 999999999999999999999983 111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc----Ccc---HH--HHhccCeeeccCCh
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI----TGT---DV--AKEASDIILTDDNF 789 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~----~g~---~~--ak~aaDiil~d~~f 789 (1119)
....|..+++.+.+. ++...+.++++||+.||+.|.+.|+++++|.. .|. +. .+..+|+++. ++
T Consensus 171 ----~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l 243 (254)
T 3umc_A 171 ----HYKPDPQVYLGACRL-LDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DL 243 (254)
T ss_dssp ----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SH
T ss_pred ----cCCCCHHHHHHHHHH-cCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CH
Confidence 122234445544443 35566789999999999999999999999984 122 12 2678899998 78
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+..++.
T Consensus 244 ~el~~~l~ 251 (254)
T 3umc_A 244 LDLHRQLA 251 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88877664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00018 Score=76.74 Aligned_cols=123 Identities=14% Similarity=0.144 Sum_probs=88.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -+. +..+.+. .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~--~~~~~~~----------------~-------- 166 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDV--IIGSDIN----------------R-------- 166 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSC--CCCHHHH----------------T--------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeE--EEEcCcC----------------C--------
Confidence 5678999999999997 999999999999999999999983 110 1111110 0
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccC----cc---H-H-HHhccCeeeccCCh
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT----GT---D-V-AKEASDIILTDDNF 789 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~----g~---~-~-ak~aaDiil~d~~f 789 (1119)
...| |..+++.+.+. ++...+.++++||+.||..|.+.|+++++|... |. + . .+..+|+++. ++
T Consensus 167 --~~kp--~~~~~~~~~~~-lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~ 239 (254)
T 3umg_A 167 --KYKP--DPQAYLRTAQV-LGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DI 239 (254)
T ss_dssp --CCTT--SHHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SH
T ss_pred --CCCC--CHHHHHHHHHH-cCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CH
Confidence 0112 23455555443 466667899999999999999999999999741 21 1 1 3567899998 88
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+..++.
T Consensus 240 ~el~~~l~ 247 (254)
T 3umg_A 240 TDLAAQLR 247 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88888775
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00022 Score=75.01 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN---------------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 703 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~---------------~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~ 703 (1119)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+. -+.+...+........
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~----- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVE----- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCccc-----
Confidence 678999999999999999999999999 46677788888873 1111111110000000
Q ss_pred hhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce----EEEccCccHHHHhc
Q psy10301 704 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG----FAMGITGTDVAKEA 779 (1119)
Q Consensus 704 ~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG----iamg~~g~~~ak~a 779 (1119)
+..+ ......|. ..+++.+.+. ++...+.++|+||+.||..+.+.|++. +..|....+.....
T Consensus 122 ---~~~~-------~~~~~KP~--p~~~~~~~~~-lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~ 188 (211)
T 2gmw_A 122 ---EFRQ-------VCDCRKPH--PGMLLSARDY-LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENA 188 (211)
T ss_dssp ---GGBS-------CCSSSTTS--CHHHHHHHHH-HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHH
T ss_pred ---ccCc-------cCcCCCCC--HHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCC
Confidence 0000 00001121 2233333222 244556788999999999999999954 33332222333456
Q ss_pred cCeeeccCChhHHHHHHH
Q psy10301 780 SDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 780 aDiil~d~~f~~i~~~i~ 797 (1119)
+|+++. ++..+.+++.
T Consensus 189 ~d~vi~--~l~el~~~l~ 204 (211)
T 2gmw_A 189 ADWVLN--SLADLPQAIK 204 (211)
T ss_dssp CSEEES--CGGGHHHHHH
T ss_pred CCEEeC--CHHHHHHHHH
Confidence 899887 6787776654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00021 Score=75.10 Aligned_cols=122 Identities=11% Similarity=0.138 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCC-CceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG-EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~-~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.++. ++.++|+........+.+.+|+...- +. +..+.+.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~~~~~~~------------------------ 137 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--IYSAKDL------------------------ 137 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--EEEHHHH------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--EEecccc------------------------
Confidence 457788888888774 89999999999999999999884221 11 1111110
Q ss_pred EEEecCh--hhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCccH-------HHHhc-cCeeecc
Q psy10301 718 VLARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGTD-------VAKEA-SDIILTD 786 (1119)
Q Consensus 718 v~ar~sP--~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g~~-------~ak~a-aDiil~d 786 (1119)
... ..|...++.+.+. ++...+.++++||+.||.+|++.|+++ ++++ ++.. ..++. +|+++.
T Consensus 138 ----~~~~~kpk~~~~~~~~~~-l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~- 210 (229)
T 2fdr_A 138 ----GADRVKPKPDIFLHGAAQ-FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS- 210 (229)
T ss_dssp ----CTTCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES-
T ss_pred ----ccCCCCcCHHHHHHHHHH-cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec-
Confidence 011 2234444444433 355667789999999999999999998 6666 4443 35666 999987
Q ss_pred CChhHHHHHHH
Q psy10301 787 DNFSSIVKAVM 797 (1119)
Q Consensus 787 ~~f~~i~~~i~ 797 (1119)
++..+...+.
T Consensus 211 -~~~el~~~l~ 220 (229)
T 2fdr_A 211 -RMQDLPAVIA 220 (229)
T ss_dssp -CGGGHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 5666666553
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=4.5e-05 Score=82.01 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=77.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~-~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++|+.....+.....+ .|+...-+. ++.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~--~~~~~~~------------------------ 165 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSH--IVLGDDP------------------------ 165 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSC--EECTTCT------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheee--EEecchh------------------------
Confidence 5789999999999999999999999987655443222 233211111 1111000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCC--CEEEEEcCCcCCHHhhhcCC---ceEEEccCccHHHHhccCeeeccCChhHH
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGR--EVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~--~~V~~iGDG~ND~~aLk~Ad---VGiamg~~g~~~ak~aaDiil~d~~f~~i 792 (1119)
......| |..+++.+.+. ++... +.++++||+.||+.|.+.|+ +++++| ++.+..+..+|+++. ++..+
T Consensus 166 ~~~~~Kp--~~~~~~~~~~~-lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 166 EVQHGKP--DPDIFLACAKR-FSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp TCCSCTT--STHHHHHHHHT-SSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGC
T ss_pred hccCCCC--ChHHHHHHHHH-cCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHh
Confidence 0001112 23344444333 34444 78999999999999999999 566667 556667889999987 55554
Q ss_pred H
Q psy10301 793 V 793 (1119)
Q Consensus 793 ~ 793 (1119)
.
T Consensus 240 ~ 240 (250)
T 3l5k_A 240 Q 240 (250)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00029 Score=72.83 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...-+. ++.+.+..
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 125 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFSAESVK------------------------ 125 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEehhhcC------------------------
Confidence 46799999 9999999 99999999999999999999998422111 11221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc---CccHHHHhccCeeeccCChhHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI---TGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~---~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
+..| |..+++.+.+. ++ .+.++++||+.||..|.+.|+++.++-. +..+..+..+|+++. ++..+...
T Consensus 126 --~~Kp--~~~~~~~~~~~-~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 196 (201)
T 2w43_A 126 --EYKP--SPKVYKYFLDS-IG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEW 196 (201)
T ss_dssp --CCTT--CHHHHHHHHHH-HT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHH
T ss_pred --CCCC--CHHHHHHHHHh-cC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 0112 23334433333 34 5668899999999999999999987721 222333456888887 67777766
Q ss_pred HH
Q psy10301 796 VM 797 (1119)
Q Consensus 796 i~ 797 (1119)
+.
T Consensus 197 l~ 198 (201)
T 2w43_A 197 IL 198 (201)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0021 Score=63.92 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=83.2
Q ss_pred CCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHH
Q psy10301 422 KTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA 501 (1119)
Q Consensus 422 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~ 501 (1119)
..||+|-|.+.++++...+. .+++ +++..+.++. ....+|...|++.++..
T Consensus 13 ~~~tit~gnr~vt~v~~~~g----------~~e~--elL~lAAs~E-----------------~~SeHPla~AIv~~A~~ 63 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG----------VDEK--TLADAAQLAS-----------------LADETPEGRSIVILAKQ 63 (156)
T ss_dssp --------CEEEEEEEECTT----------SCHH--HHHHHHHHTT-----------------SSCCSHHHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCC----------CCHH--HHHHHHHHHh-----------------CcCCCHHHHHHHHHHHH
Confidence 46999999999999865321 1222 2332222221 11246899999999987
Q ss_pred c-CCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHH
Q psy10301 502 I-GKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRN 580 (1119)
Q Consensus 502 ~-g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~ 580 (1119)
. +........ .-.+..+|++..++..+.+ +| +-+.+|+++.|.+.|.. .|. .+.++ ++.
T Consensus 64 ~~~l~~~~~~~-----~~~~~~~F~a~~G~~Gv~v--~G--~~v~vGn~~~i~~l~~~----~gi--~~~~~-----~~~ 123 (156)
T 1svj_A 64 RFNLRERDVQS-----LHATFVPFTAQSRMSGINI--DN--RMIRKGSVDAIRRHVEA----NGG--HFPTD-----VDQ 123 (156)
T ss_dssp HTTCCCCCHHH-----HTCEEEEEETTTTEEEEEE--TT--EEEEEEEHHHHHHHHHH----HTC--CCCHH-----HHH
T ss_pred hcCCCcccccc-----cccceeeccccCCCCeEEE--CC--EEEEEeCcHHHHHHHHH----cCC--CCcHH-----HHH
Confidence 5 543211100 0124568988877666644 45 34678999887776642 111 12211 235
Q ss_pred HHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCc
Q psy10301 581 VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 642 (1119)
Q Consensus 581 ~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~ 642 (1119)
..+.++.+|.+++.+|. |..++|++++.|++||
T Consensus 124 ~~~~la~~G~T~v~VA~-----------------------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 124 KVDQVARQGATPLVVVE-----------------------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHHTTCEEEEEEE-----------------------------TTEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCCEEEEEE-----------------------------CCEEEEEEEEecCCCC
Confidence 57789999999999984 2469999999999997
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00038 Score=74.96 Aligned_cols=124 Identities=8% Similarity=0.079 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+...-+. ++.+.+..
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 144 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VISVDAKR------------------------ 144 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccE--EEEccccC------------------------
Confidence 57899999999999 999999999999999999999998432121 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccC-----------------------c---
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT-----------------------G--- 772 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~-----------------------g--- 772 (1119)
. +.-|..+.+.+.+. ++...+.++++||+.||+.|.+.|+++.++... +
T Consensus 145 --~--~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 219 (253)
T 1qq5_A 145 --V--FKPHPDSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMR 219 (253)
T ss_dssp --C--CTTSHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSS
T ss_pred --C--CCCCHHHHHHHHHH-cCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccc
Confidence 0 11122333333322 355556788999999999999999999988733 1
Q ss_pred cHHHHhccCeeeccCChhHHHHHHH
Q psy10301 773 TDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 773 ~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.+..+..+|+++. ++..+...+.
T Consensus 220 ~~~~~~~~~~~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 220 EETYAEAPDFVVP--ALGDLPRLVR 242 (253)
T ss_dssp CCTTSCCCSEEES--SGGGHHHHHH
T ss_pred cCCCCCCCCeeeC--CHHHHHHHHH
Confidence 1223456888887 6777776654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0004 Score=75.01 Aligned_cols=51 Identities=24% Similarity=0.250 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcCC-ceEEEccCccHHHHhccCe
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDI 782 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~Ad-VGiamg~~g~~~ak~aaDi 782 (1119)
+|..-++.|. + ..+.++++|| |.||.+||+.|+ +|++|+ ++.+..|...++
T Consensus 187 ~Kg~al~~L~----~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVE----D-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTT----T-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHH----c-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 6777777663 3 5678999999 799999999996 899999 888887765544
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00035 Score=71.84 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=68.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~-~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+...-+ .
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~---------------------------------~ 114 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV---------------------------------H 114 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE---------------------------------E
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc---------------------------------e
Confidence 688999999999999999999999999 789999999999832100 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 767 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia 767 (1119)
++. .+..|....+.+.+. ++...+.++++||+.+|+.+.+.|++...
T Consensus 115 ~~~--~~~~k~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 115 REI--YPGSKITHFERLQQK-TGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp EEE--SSSCHHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred eEE--EeCchHHHHHHHHHH-cCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 111 122344444444333 35555678899999999999999987654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00023 Score=77.91 Aligned_cols=115 Identities=12% Similarity=0.067 Sum_probs=77.6
Q ss_pred CCccHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 640 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 640 lr~~v~~aI~~l~~a-GI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+.|++.+.++.|++. |+++.++|+.....+..+.+..|+.. -+. ++.+.+..
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f~~-i~~~~~~~------------------------ 167 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--PEY-FITANDVK------------------------ 167 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--CSS-EECGGGCS------------------------
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--cCE-EEEcccCC------------------------
Confidence 578999999999999 99999999999999999988888731 111 22222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-------CCCEEEEEcCCcCCHHhhhcCCceEEE---ccCccHHHHhccCeeecc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISA-------GREVVAVTGDGTNDGPALKKADVGFAM---GITGTDVAKEASDIILTD 786 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~-------~~~~V~~iGDG~ND~~aLk~AdVGiam---g~~g~~~ak~aaDiil~d 786 (1119)
. ...|...++.+.+. ++. ..+.++++||+.||..|++.|+++++| |.+..+..+..||+++.+
T Consensus 168 --~--~kp~~~~~~~~~~~-lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 168 --Q--GKPHPEPYLKGRNG-LGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp --S--CTTSSHHHHHHHHH-TTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred --C--CCCChHHHHHHHHH-cCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 0 11122333333332 354 556799999999999999999977766 523223333458998863
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00097 Score=72.43 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=44.5
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCCceEEEccC---ccHHHHh---ccCeeeccCChhHHHHHHH
Q psy10301 729 TLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAMGIT---GTDVAKE---ASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 729 ~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~AdVGiamg~~---g~~~ak~---aaDiil~d~~f~~i~~~i~ 797 (1119)
..++.+.+. ++...+.++|+||+ .||..|++.|+++.++... +.+..++ .+|+++. ++..+..-++
T Consensus 187 ~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~~ 259 (266)
T 3pdw_A 187 IIMEQAMRV-LGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYIE 259 (266)
T ss_dssp HHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHHH
T ss_pred HHHHHHHHH-cCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHhh
Confidence 445555444 45566788999999 7999999999987766422 3344444 4999988 6766665553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00094 Score=70.34 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=84.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++ |+++.++|+........+.+.++- .-+. ++.+.+...
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd~-i~~~~~~~~----------------------- 150 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFDH-IITAQDVGS----------------------- 150 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCSE-EEEHHHHTS-----------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccCE-EEEccccCC-----------------------
Confidence 678999999999999 899999999998877776665432 1111 222222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCc----------cHHHHhccCeeeccC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITG----------TDVAKEASDIILTDD 787 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g----------~~~ak~aaDiil~d~ 787 (1119)
..-.|+-...+++.+.. ++...+.++++||+. ||+.|.+.|+++++|...+ .+..+..+|+++.
T Consensus 151 -~KP~~~~~~~~l~~~~~--lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~-- 225 (240)
T 3smv_A 151 -YKPNPNNFTYMIDALAK--AGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN-- 225 (240)
T ss_dssp -CTTSHHHHHHHHHHHHH--TTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--
T ss_pred -CCCCHHHHHHHHHHHHh--cCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--
Confidence 11123333344333221 456667899999996 9999999999999995222 1334578999998
Q ss_pred ChhHHHHHHH
Q psy10301 788 NFSSIVKAVM 797 (1119)
Q Consensus 788 ~f~~i~~~i~ 797 (1119)
++..+.+++.
T Consensus 226 ~~~el~~~l~ 235 (240)
T 3smv_A 226 SMGEMAEAHK 235 (240)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7888877764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0017 Score=69.65 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...-+ .+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------~i 157 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP---------------------------------RI 157 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC---------------------------------CE
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc---------------------------------ee
Confidence 46799999999999 999999999999888888888888742111 12
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCccH--------HHHhccCe-eeccCC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTD--------VAKEASDI-ILTDDN 788 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g~~--------~ak~aaDi-il~d~~ 788 (1119)
++...|. ...++.+.+. ++...+.++++||+. ||..|.+.|++++++=..|.. .....+|+ ++. +
T Consensus 158 ~~~~kp~--~~~~~~~~~~-l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~ 232 (251)
T 2pke_A 158 EVVSEKD--PQTYARVLSE-FDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--D 232 (251)
T ss_dssp EEESCCS--HHHHHHHHHH-HTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--S
T ss_pred eeeCCCC--HHHHHHHHHH-hCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--C
Confidence 2222232 3333333332 355667889999999 999999999999876323321 11345787 676 6
Q ss_pred hhHHHHHHH
Q psy10301 789 FSSIVKAVM 797 (1119)
Q Consensus 789 f~~i~~~i~ 797 (1119)
+..+..++.
T Consensus 233 ~~el~~~l~ 241 (251)
T 2pke_A 233 PSGWPAAVR 241 (251)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00063 Score=69.28 Aligned_cols=107 Identities=15% Similarity=0.041 Sum_probs=69.8
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEE
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 719 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 719 (1119)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-+ .++.+.+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~--~~~~~~~~-------------------------- 133 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT--EVVTSSSG-------------------------- 133 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE--EEECGGGC--------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee--eeeecccc--------------------------
Confidence 679999999999999999999998864 5677778888732100 01111110
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccC
Q psy10301 720 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 781 (1119)
Q Consensus 720 ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaD 781 (1119)
.+..| |...++.+.+. ++.. .++++||+.||..|.+.|++++++. +.....++..+
T Consensus 134 ~~~kp--~~~~~~~~~~~-~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 134 FKRKP--NPESMLYLREK-YQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp CCCTT--SCHHHHHHHHH-TTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred CCCCC--CHHHHHHHHHH-cCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 01112 23333444332 2434 6889999999999999999999886 45455555443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0008 Score=73.16 Aligned_cols=66 Identities=23% Similarity=0.281 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCC---ceEEEccCccHHHHh--------ccCeeeccCChhHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKAD---VGFAMGITGTDVAKE--------ASDIILTDDNFSSIVK 794 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~Ad---VGiamg~~g~~~ak~--------aaDiil~d~~f~~i~~ 794 (1119)
|..+++.+.+. ++...+.++|+||+ .||..|.+.|+ +++++| .+.....+ .+|+++. ++..+.+
T Consensus 189 ~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g-~~~~~~~~~~~~~~~~~~d~v~~--~~~el~~ 264 (268)
T 3qgm_A 189 SEVIMREALDI-LGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG-VTTRENLDQMIERHGLKPDYVFN--SLKDMVE 264 (268)
T ss_dssp SHHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS-SCCTTTHHHHHHHHTCCCSEEES--SHHHHHH
T ss_pred CHHHHHHHHHH-hCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC-CCCHHHHHhhccccCCCCCEEEC--CHHHHHH
Confidence 34555555444 45566789999999 59999999999 688888 44433222 6899987 7777765
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
++
T Consensus 265 ~l 266 (268)
T 3qgm_A 265 AL 266 (268)
T ss_dssp TC
T ss_pred HH
Confidence 54
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0024 Score=65.65 Aligned_cols=136 Identities=10% Similarity=0.151 Sum_probs=86.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNI---NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~---~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+...-+ .+ +.+.+...
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd-~i-~~~~~~~~------------------- 91 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD-FI-YASNSELQ------------------- 91 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE-EE-EECCTTSS-------------------
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE-EE-EEcccccc-------------------
Confidence 36899999999999999999999998776 88889999999842111 11 11100000
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCCceEEEccCccH-----HHH-hccCeeeccC
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAMGITGTD-----VAK-EASDIILTDD 787 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~AdVGiamg~~g~~-----~ak-~aaDiil~d~ 787 (1119)
......|. ..+.+.+.+. ++...+.++++||+ .+|+.+-+.|++....=..+.. ... ..+|+++.+.
T Consensus 92 ---~~~~~KP~--p~~~~~~~~~-~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~ 165 (189)
T 3ib6_A 92 ---PGKMEKPD--KTIFDFTLNA-LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVW 165 (189)
T ss_dssp ---TTCCCTTS--HHHHHHHHHH-HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEES
T ss_pred ---ccCCCCcC--HHHHHHHHHH-cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccc
Confidence 00000121 2222222222 25556779999999 7999999999987543212221 111 2678888877
Q ss_pred ChhHHHHHHHHHH
Q psy10301 788 NFSSIVKAVMWGR 800 (1119)
Q Consensus 788 ~f~~i~~~i~~GR 800 (1119)
++..+..++...+
T Consensus 166 ~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 166 DLADVPEALLLLK 178 (189)
T ss_dssp SGGGHHHHHHHHH
T ss_pred cHHhHHHHHHHHH
Confidence 8888888876544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00068 Score=73.61 Aligned_cols=125 Identities=12% Similarity=0.183 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-+. ++.+.+..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 158 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF--VLTSEAAG------------------------ 158 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC--EEEHHHHS------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE--EEeecccC------------------------
Confidence 36799999999999999999999987664 6788888998432121 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCccHH-----HHhccCeeeccCChhHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTDV-----AKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g~~~-----ak~aaDiil~d~~f~~i 792 (1119)
...| +..+++.+.+. ++...+.++++||+. ||+.|.+.|+++++|...+... ....+|+++. ++..+
T Consensus 159 --~~Kp--~~~~~~~~~~~-~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el 231 (263)
T 3k1z_A 159 --WPKP--DPRIFQEALRL-AHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHL 231 (263)
T ss_dssp --SCTT--SHHHHHHHHHH-HTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGH
T ss_pred --CCCC--CHHHHHHHHHH-cCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHH
Confidence 0112 12223332222 355667899999997 9999999999999987444321 2236899987 78888
Q ss_pred HHHHH
Q psy10301 793 VKAVM 797 (1119)
Q Consensus 793 ~~~i~ 797 (1119)
..++.
T Consensus 232 ~~~l~ 236 (263)
T 3k1z_A 232 LPALD 236 (263)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00035 Score=76.19 Aligned_cols=59 Identities=17% Similarity=0.272 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcCC-ceEEEccCccHHHHhccCeeeccCC
Q psy10301 725 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDIILTDDN 788 (1119)
Q Consensus 725 ~~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~Ad-VGiamg~~g~~~ak~aaDiil~d~~ 788 (1119)
-+|...++.+ ++...+.|+++|| +.||.+||+.|+ +|++|| ++.+..|+.||+++.+++
T Consensus 196 vsKg~al~~l----~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL----DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH----TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH----HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 4799889888 3566788999999 999999999999 699998 999999999999987544
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0049 Score=66.90 Aligned_cols=43 Identities=12% Similarity=0.070 Sum_probs=37.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCcC
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIVK 680 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~T---GD~~~ta~~ia~~~Gi~~ 680 (1119)
+++-+++.++++++++.|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4566889999999999999999999 899998888889999843
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00062 Score=71.83 Aligned_cols=135 Identities=14% Similarity=0.053 Sum_probs=78.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCcCCCCce-EEEecHhHHHHhhcCc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDY-LILEGKEFNRRVRDNN 701 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~---------------~ta~~ia~~~Gi~~~~~~~-i~l~g~~~~~~~~~~~ 701 (1119)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+. -+.+ .+..+.+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~--------- 123 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA--------- 123 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT---------
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC---------
Confidence 46889999999999999999999999987 6777788888872 1111 1111100
Q ss_pred hhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE-EEccCcc---HHHH
Q psy10301 702 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGT---DVAK 777 (1119)
Q Consensus 702 ~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi-amg~~g~---~~ak 777 (1119)
+.+. +. .. .+ ....-|..+.+.+.+. ++...+.++|+||+.||+.+.+.|++.. .+-..|. +...
T Consensus 124 g~~~-~~-----~~-~~---~~~KP~~~~~~~~~~~-~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~ 192 (218)
T 2o2x_A 124 GVGP-LA-----IP-DH---PMRKPNPGMLVEAGKR-LALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFA 192 (218)
T ss_dssp CCST-TC-----CS-SC---TTSTTSCHHHHHHHHH-HTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEE
T ss_pred Ccee-ec-----cc-CC---ccCCCCHHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCccccc
Confidence 0000 00 00 00 0011122334433332 3555667899999999999999999765 3211221 1122
Q ss_pred hccCeeeccCChhHHHHHH
Q psy10301 778 EASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 778 ~aaDiil~d~~f~~i~~~i 796 (1119)
..+|+++. ++..+..++
T Consensus 193 ~~~~~~i~--~l~el~~~l 209 (218)
T 2o2x_A 193 IRPLRDSS--ELGDLLAAI 209 (218)
T ss_dssp EEEESSHH--HHHHHHHHH
T ss_pred CCCCEecc--cHHHHHHHH
Confidence 34566655 566665554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.011 Score=63.62 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCc---cHH-HH--hccCeeeccCChhHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITG---TDV-AK--EASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g---~~~-ak--~aaDiil~d~~f~~i~~~i 796 (1119)
.|...++.+.+. ++...+.++++||+. ||..|++.|++++++=..| .+. .+ ..+|+++. ++..+.+.+
T Consensus 191 pk~~~~~~~~~~-lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~--~~~el~~~l 265 (271)
T 2x4d_A 191 PSPEFFKSALQA-IGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVD--NLAEAVDLL 265 (271)
T ss_dssp TCHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEES--SHHHHHHHH
T ss_pred CCHHHHHHHHHH-hCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeC--CHHHHHHHH
Confidence 456667766554 466667899999998 9999999999998763233 111 11 33888887 688777655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00041 Score=74.75 Aligned_cols=53 Identities=19% Similarity=0.329 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcCCc-eEEEccCccHHHHhccCee
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKADV-GFAMGITGTDVAKEASDII 783 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~AdV-Giamg~~g~~~ak~aaDii 783 (1119)
+|...++.+ ++...+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 188 ~Kg~al~~l----~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV----ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGT----TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHH----hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 688888877 3556788999999 9999999999987 99999 9999999999987
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0054 Score=66.49 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=39.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCcCCCCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIVKPGEDYLI 687 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~T---GD~~~ta~~ia~~~Gi~~~~~~~i~ 687 (1119)
++ |++.++|++++++|++++++| |+.........+++|+..+.+.++.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 46 899999999999999999999 8888888888899998554444433
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0033 Score=64.61 Aligned_cols=102 Identities=9% Similarity=0.065 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+...-+.+ +.+.+..
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~--~~~~~~~------------------------ 138 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAF--FTSSALG------------------------ 138 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCE--EEHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceE--EeecccC------------------------
Confidence 47799999999999999 99999999999999999999984322211 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG 772 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g 772 (1119)
...|. ..+++.+.+. ++...+.++++||+.||..|.+.|++...+-..+
T Consensus 139 --~~Kp~--~~~~~~~~~~-~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 139 --VMKPN--PAMYRLGLTL-AQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp --CCTTC--HHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred --CCCCC--HHHHHHHHHH-cCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 01122 1223333222 3555667899999999999999999998775333
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0012 Score=68.44 Aligned_cols=100 Identities=9% Similarity=0.045 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK------CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 712 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~------~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i 712 (1119)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-+. ++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~--~~~~~~~~------------------ 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK--VYASCQMG------------------ 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE--EEEHHHHT------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe--EEeecccC------------------
Confidence 467999999999999 999999999988887777776 566321111 11111100
Q ss_pred cCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc
Q psy10301 713 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI 770 (1119)
Q Consensus 713 ~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~ 770 (1119)
...|. ..+.+.+.+. ++...+.++++||+.||..|.+.|+++.+|..
T Consensus 148 --------~~Kp~--~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 148 --------KYKPN--EDIFLEMIAD-SGMKPEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp --------CCTTS--HHHHHHHHHH-HCCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred --------CCCCC--HHHHHHHHHH-hCCChHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 01122 2233333222 35566778999999999999999999998873
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0075 Score=62.74 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...-+. ++.+.+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~~~~~~~------------------------- 136 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--MVFGDQV------------------------- 136 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECGGGS-------------------------
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--ccccccc-------------------------
Confidence 4578999999999999999999999999999999999998532111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE----EEccCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF----AMGITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi----amg~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
.+..|+- .+.....+. ++...+.++|+||+.+|+.+=++|++.. .-|.+..+..+++.+..+. +...+.+
T Consensus 137 -~~~KP~p--~~~~~a~~~-lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~ 210 (216)
T 3kbb_A 137 -KNGKPDP--EIYLLVLER-LNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILN 210 (216)
T ss_dssp -SSCTTST--HHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHH
T ss_pred -CCCcccH--HHHHHHHHh-hCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHH
Confidence 0112221 122222221 3555677899999999999999999753 3343344455555444444 3445555
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
.++
T Consensus 211 ~l~ 213 (216)
T 3kbb_A 211 VLK 213 (216)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.004 Score=65.27 Aligned_cols=119 Identities=13% Similarity=0.147 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++. +++.++|+.... .+.+|+...-+. ++.+.+..
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~--~~~~~~~~------------------------ 152 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAF--ALCAEDLG------------------------ 152 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSE--EEEHHHHT------------------------
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeee--eEEccccC------------------------
Confidence 4678999999999998 999999987654 244555311111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEc---cCccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMG---ITGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg---~~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
...-|..+++.+.+. ++...+.++++||+. ||+.|.+.|+++.++- ....+. +..+|+++. ++..+.+
T Consensus 153 ----~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~ 224 (230)
T 3vay_A 153 ----IGKPDPAPFLEALRR-AKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPE 224 (230)
T ss_dssp ----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHH
T ss_pred ----CCCcCHHHHHHHHHH-hCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHH
Confidence 011123444444333 355667789999998 9999999999998872 122223 667899998 7888877
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
++.
T Consensus 225 ~l~ 227 (230)
T 3vay_A 225 VLA 227 (230)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.01 Score=64.21 Aligned_cols=124 Identities=12% Similarity=0.170 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..--+. ++.+.+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~--i~~~~~~~------------------------ 173 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA--IVIGGEQK------------------------ 173 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEEGGGSS------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe--EEecCCCC------------------------
Confidence 578999999999998 699999999999999999999998422111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCCc--eEEEccCccH--HHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADV--GFAMGITGTD--VAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~AdV--Giamg~~g~~--~ak~aaDiil~d~~f~~i~ 793 (1119)
...|. ..+...+.+. ++...+.++++||+ .||+.+-+.|++ .+.++..+.. .....+|+++. ++..+.
T Consensus 174 --~~KP~--p~~~~~~~~~-~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~ 246 (260)
T 2gfh_A 174 --EEKPA--PSIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELP 246 (260)
T ss_dssp --SCTTC--HHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHH
T ss_pred --CCCCC--HHHHHHHHHH-cCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHH
Confidence 01121 2223322222 35556778999995 999999999999 5767522211 12346788887 677776
Q ss_pred HHH
Q psy10301 794 KAV 796 (1119)
Q Consensus 794 ~~i 796 (1119)
.++
T Consensus 247 ~~l 249 (260)
T 2gfh_A 247 ALL 249 (260)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0039 Score=59.67 Aligned_cols=97 Identities=9% Similarity=0.050 Sum_probs=64.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~~~~~~------------------------ 71 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDK--VLLSGELG------------------------ 71 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSE--EEEHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccE--EEEeccCC------------------------
Confidence 4678999999999999999999999998888888888887422111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
...|. ..+.+.+.+. ++...+.++++||+.+|..+.++|++..
T Consensus 72 --~~Kp~--~~~~~~~~~~-~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 72 --VEKPE--EAAFQAAADA-IDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp --CCTTS--HHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred --CCCCC--HHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 01122 1122222222 2445567889999999999999999743
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0056 Score=64.52 Aligned_cols=100 Identities=7% Similarity=0.021 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH------HHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhh
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA------TKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 712 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia------~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i 712 (1119)
++.|++.++++.|++. +++.++|+.+...+..+. +..|+...-+. ++.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~--i~~~~~~------------------- 169 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK--TYLSYEM------------------- 169 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE--EEEHHHH-------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE--EEeeccc-------------------
Confidence 4679999999999999 999999999998888766 33454211010 1111110
Q ss_pred cCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc
Q psy10301 713 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI 770 (1119)
Q Consensus 713 ~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~ 770 (1119)
....|. ..+.+.+.+. ++...+.++++||+.||+.|.+.|+++.++..
T Consensus 170 -------~~~KP~--~~~~~~~~~~-~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 217 (229)
T 4dcc_A 170 -------KMAKPE--PEIFKAVTED-AGIDPKETFFIDDSEINCKVAQELGISTYTPK 217 (229)
T ss_dssp -------TCCTTC--HHHHHHHHHH-HTCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred -------CCCCCC--HHHHHHHHHH-cCCCHHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence 011121 1233333322 35566778999999999999999999998873
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0016 Score=67.15 Aligned_cols=103 Identities=11% Similarity=0.143 Sum_probs=62.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~-~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.+.++.|++.|+++.++|+........+... .|+...-+. ++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~--~~~~~~~------------------------ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH--IYLSQDL------------------------ 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSE--EEEHHHH------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheee--EEEeccc------------------------
Confidence 4679999999999999999999999765543332222 232100000 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCc
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG 772 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g 772 (1119)
....|. ..+.+.+.+. ++...+.++++||+.||..|.+.|++...+...+
T Consensus 145 --~~~Kp~--~~~~~~~~~~-~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 145 --GMRKPE--ARIYQHVLQA-EGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp --TCCTTC--HHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred --CCCCCC--HHHHHHHHHH-cCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 011222 1222222222 3555677899999999999999999998876333
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.024 Score=59.78 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCCceEEE---ccCccHHHH---hccCeeec
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAM---GITGTDVAK---EASDIILT 785 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~AdVGiam---g~~g~~~ak---~aaDiil~ 785 (1119)
.|...++.+.+. ++...+.++++||+ .||..|++.|++++++ |....+..+ ..+|+++.
T Consensus 177 pk~~~~~~~~~~-lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 177 PSPWIIRAALNK-MQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp TSTHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred CCHHHHHHHHHH-cCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 355566666554 45666789999999 6999999999988554 522223333 46888886
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.017 Score=62.26 Aligned_cols=86 Identities=20% Similarity=0.210 Sum_probs=62.9
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhh
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 712 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~----~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i 712 (1119)
+.++.|++.+.++.|++.|+++.++||... ..+..-.+++||....+.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------- 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------- 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc----------------------------
Confidence 357899999999999999999999999965 467777788999421111
Q ss_pred cCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHh
Q psy10301 713 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 758 (1119)
Q Consensus 713 ~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~a 758 (1119)
.++-|.....|....+.+.+ ..-.+|+++||..+|.++
T Consensus 151 ----~Lilr~~~~~K~~~r~~L~~----~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ----TLLLKKDKSNKSVRFKQVED----MGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ----TEEEESSCSSSHHHHHHHHT----TTCEEEEEEESSGGGGCG
T ss_pred ----eeEecCCCCChHHHHHHHHh----cCCCEEEEECCChHHcCc
Confidence 12223234567776676643 245789999999999986
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.14 Score=54.53 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCc---c-HHH--HhccCeeeccCChhHHHHHHH
Q psy10301 727 KYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITG---T-DVA--KEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 727 K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g---~-~~a--k~aaDiil~d~~f~~i~~~i~ 797 (1119)
|..+.+.+.+. ++...+.++++||+. ||..|.+.|++....=..| . +.. ...+|+++. ++..+...+.
T Consensus 181 ~~~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~--~l~~l~~~l~ 255 (259)
T 2ho4_A 181 EKTFFLEALRD-ADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCE--SFPHAVDHIL 255 (259)
T ss_dssp SHHHHHHHGGG-GTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEES--CHHHHHHHHH
T ss_pred CHHHHHHHHHH-cCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEEC--CHHHHHHHHH
Confidence 44555555433 455567889999998 9999999999754321133 1 111 245788876 7888776653
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.013 Score=67.19 Aligned_cols=137 Identities=16% Similarity=0.240 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.++++.|+++|+++.++|+.....+..+.+..|+...-+.-.++.+.+.... .+. .+...-
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~---------~~~----~~~~kp 281 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA---------ENM----YPQARP 281 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH---------HHH----STTSCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc---------ccc----cccccC
Confidence 6789999999999999999999999999999999999998532220013334332210 000 000000
Q ss_pred EEecChhhHHHHHHHHHHhhcC--------------CCCCEEEEEcCCcCCHHhhhcCCceEE-EccCcc-------HHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKIS--------------AGREVVAVTGDGTNDGPALKKADVGFA-MGITGT-------DVA 776 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~--------------~~~~~V~~iGDG~ND~~aLk~AdVGia-mg~~g~-------~~a 776 (1119)
+..|.-.. ....+.+ ++ ...+.++++||+.+|+.+-++|++... +. .|. +..
T Consensus 282 --~~KP~P~~-~~~a~~~--lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~ 355 (384)
T 1qyi_A 282 --LGKPNPFS-YIAALYG--NNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELE 355 (384)
T ss_dssp --CCTTSTHH-HHHHHHC--CCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHH
T ss_pred --CCCCCHHH-HHHHHHH--cCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHh
Confidence 01122111 1111111 12 345678999999999999999997632 32 221 122
Q ss_pred HhccCeeeccCChhHHHHHH
Q psy10301 777 KEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 777 k~aaDiil~d~~f~~i~~~i 796 (1119)
...+|+++. ++..+...+
T Consensus 356 ~~~ad~vi~--sl~eL~~~l 373 (384)
T 1qyi_A 356 AHHADYVIN--HLGELRGVL 373 (384)
T ss_dssp HTTCSEEES--SGGGHHHHH
T ss_pred hcCCCEEEC--CHHHHHHHH
Confidence 346899987 677776655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.075 Score=54.82 Aligned_cols=90 Identities=10% Similarity=0.069 Sum_probs=56.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|+++|+++.++||.....+..+.. .. -+.++. +.+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~--~~~~------------------------- 83 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIA--APRP------------------------- 83 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEE--CCCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEE--CCcC-------------------------
Confidence 578999999999999999999999998877754443 10 011111 1000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCC-CCEEEEEcCCcCCHHhhhcCCc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~-~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
.+..|.- .-+.+.+.+ ++.. .+.++|+||..+|+.+=+.|++
T Consensus 84 -~~~KP~p-~~~~~a~~~--l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 84 -TAGWPQP-DACWMALMA--LNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp -SSCTTST-HHHHHHHHH--TTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred -CCCCCCh-HHHHHHHHH--cCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 0112221 122223322 2332 3568899999999999999996
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.26 E-value=0.029 Score=60.50 Aligned_cols=86 Identities=16% Similarity=0.096 Sum_probs=61.0
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhh
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 712 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~----~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i 712 (1119)
++++.|++.+.++.|+++|+++.++||.+. ..+..-.+++||-.-.++.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~--------------------------- 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA--------------------------- 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG---------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc---------------------------
Confidence 367899999999999999999999999865 4666777889984211111
Q ss_pred cCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHh
Q psy10301 713 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 758 (1119)
Q Consensus 713 ~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~a 758 (1119)
++-|..-..|....+.+.+. .-.+|+++||..+|.++
T Consensus 152 -----Lilr~~~~~K~~~r~~l~~~----Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 -----FYLKKDKSAKAARFAEIEKQ----GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp -----EEEESSCSCCHHHHHHHHHT----TEEEEEEEESSGGGGCS
T ss_pred -----eeccCCCCChHHHHHHHHhc----CCCEEEEECCChHHhcc
Confidence 22232234566666666432 23589999999999975
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.045 Score=57.09 Aligned_cols=119 Identities=11% Similarity=0.046 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-+. ++.+.+..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 147 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDA--LALSYEIK------------------------ 147 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSE--EC------------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeE--EEeccccC------------------------
Confidence 4679999999999999999999999866 47788888998421111 11111000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcC-CHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN-DGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~N-D~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
...-.|+--..+.+.+ +.. . +++||+.+ |+.+-+.|++....-..+... .+. +.++. ++..+...+
T Consensus 148 ~~Kp~~~~~~~~~~~~-----~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i~--~l~el~~~l 214 (220)
T 2zg6_A 148 AVKPNPKIFGFALAKV-----GYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRVK--NLREALQKI 214 (220)
T ss_dssp -----CCHHHHHHHHH-----CSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCBS--SHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc-----CCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEEC--CHHHHHHHH
Confidence 0111222222223322 322 2 89999999 999999999876532122111 111 34443 566666554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=0.084 Score=58.39 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=35.0
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIV 679 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~T---GD~~~ta~~ia~~~Gi~ 679 (1119)
+++-+++.+++++|++.|++++++| |..........+++|+.
T Consensus 36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 3456789999999999999999999 57777777777788874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.87 E-value=0.059 Score=56.71 Aligned_cols=115 Identities=12% Similarity=0.144 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+.. .++. .+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~---------------------------~f~~-----~~ 142 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD---------------------------EVEG-----RV 142 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH---------------------------HTTT-----CE
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH---------------------------hcCe-----eE
Confidence 68899999999999999 999999999988999999998731 0111 01
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcC---CHHhhhcCCceE-EEccCc----c-HHHHhc--cCeeeccC
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN---DGPALKKADVGF-AMGITG----T-DVAKEA--SDIILTDD 787 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~N---D~~aLk~AdVGi-amg~~g----~-~~ak~a--aDiil~d~ 787 (1119)
... ..|..+++.+.+ . ...+.++++||+.| |..+-+.|++.. .+. .| . +..++. +|+++.
T Consensus 143 ~~~---~~K~~~~~~~~~-~--~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~-- 213 (231)
T 2p11_A 143 LIY---IHKELMLDQVME-C--YPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVE-- 213 (231)
T ss_dssp EEE---SSGGGCHHHHHH-H--SCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEES--
T ss_pred Eec---CChHHHHHHHHh-c--CCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeec--
Confidence 111 123334444433 2 24567999999999 555556677532 222 22 1 223333 888886
Q ss_pred ChhHHHHH
Q psy10301 788 NFSSIVKA 795 (1119)
Q Consensus 788 ~f~~i~~~ 795 (1119)
++..+...
T Consensus 214 ~~~el~~~ 221 (231)
T 2p11_A 214 RIGDLVEM 221 (231)
T ss_dssp SGGGGGGC
T ss_pred CHHHHHHH
Confidence 56655443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=93.58 E-value=0.09 Score=56.18 Aligned_cols=116 Identities=12% Similarity=0.224 Sum_probs=72.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+. ++.+.+...
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i~~~~~~~~----------------------- 168 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--IADAGKCKN----------------------- 168 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--ECCGGGCCS-----------------------
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--eecccccCC-----------------------
Confidence 578999999999999999998877654 45667788998532111 122211100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc-eEEEccCccHHHHhccCeeeccCChhHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV-Giamg~~g~~~ak~aaDiil~d~~f~~i 792 (1119)
..-.|+-=..+.+. ++...+.++++||+.+|+.+-++|++ .|+++ + .+. ...||+++. ++..+
T Consensus 169 -~KP~p~~~~~a~~~-----lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~-~~~-~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 169 -NKPHPEIFLMSAKG-----LNVNPQNCIGIEDASAGIDAINSANMFSVGVG-N-YEN-LKKANLVVD--STNQL 232 (250)
T ss_dssp -CTTSSHHHHHHHHH-----HTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-C-TTT-TTTSSEEES--SGGGC
T ss_pred -CCCcHHHHHHHHHH-----hCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-C-hhH-hccCCEEEC--ChHhC
Confidence 01122222222332 35556778999999999999999997 44444 2 222 235899987 55554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.014 Score=59.18 Aligned_cols=96 Identities=23% Similarity=0.257 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCcCCCCceEEEec----HhHHHHhhc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGD---------------NINTARSIATKCGIVKPGEDYLILEG----KEFNRRVRD 699 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD---------------~~~ta~~ia~~~Gi~~~~~~~i~l~g----~~~~~~~~~ 699 (1119)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+. -+.+...+ .+..
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~----- 113 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECD----- 113 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCS-----
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccccc-----
Confidence 57899999999999999999999997 466777888888883 12222221 1100
Q ss_pred CchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 700 NNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 700 ~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
...|. ..+.+.+.+. ++...+.++++||+.+|+.+-+.|++..
T Consensus 114 ---------------------~~KP~--p~~~~~~~~~-~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 ---------------------CRKPK--VKLVERYLAE-QAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp ---------------------SSTTS--CGGGGGGC-----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred ---------------------ccCCC--HHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 00111 1111111110 1233456889999999999999999864
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.19 E-value=0.079 Score=59.32 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=76.0
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCcCCCCceEEEecH----h------HHHHhhcCch
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC----GIVKPGEDYLILEGK----E------FNRRVRDNNG 702 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~----Gi~~~~~~~i~l~g~----~------~~~~~~~~~~ 702 (1119)
...+.|+..+.++.++++|++|+++||-+..-++.+|..+ || |.++++-+.-. . .+.... ++
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI--p~e~ViG~~~~~~~~~~~~~~~~~~~~~--dg 216 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA--KPENVIGVTTLLKNRKTGELTTARKQIA--EG 216 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC--CGGGEEEECEEEECTTTCCEECHHHHHH--TT
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC--CHHHeEeeeeeeeccccccccccccccc--cc
Confidence 3457899999999999999999999999999999999985 44 33444432210 0 000000 00
Q ss_pred hhhHHHHhhhcCceEEEEe-----cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhc--CCceEEEccCccH
Q psy10301 703 EVQQNLLDKVWPRLRVLAR-----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKK--ADVGFAMGITGTD 774 (1119)
Q Consensus 703 ~~~~~~~~~i~~~~~v~ar-----~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~--AdVGiamg~~g~~ 774 (1119)
..... ....+.+-.+ +--+-|...++..+ ...+..+++.||+. .|.+||.. ++.|+++-++-.+
T Consensus 217 ~y~~~----~~~~~~~~~~~~~p~~~~~GK~~~I~~~i----~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 217 KYDPK----ANLDLEVTPYLWTPATWMAGKQAAILTYI----DRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp CCCGG----GGTTCEEEEEECSSCSSTHHHHHHHHHHT----CSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred ccccc----ccccccccccccccccccCccHHHHHHHH----hhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCC
Confidence 00000 0011122222 12356777777653 33445688999994 79999965 5667766544433
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.09 E-value=0.075 Score=58.61 Aligned_cols=97 Identities=20% Similarity=0.149 Sum_probs=65.9
Q ss_pred ccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHH---HHHHHH--------cCCcCCCCceEEEecHhHHHHhhcCchhh
Q psy10301 636 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTA---RSIATK--------CGIVKPGEDYLILEGKEFNRRVRDNNGEV 704 (1119)
Q Consensus 636 ieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta---~~ia~~--------~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~ 704 (1119)
.++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+ + .+.++..+.. .
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~-~~~~~~~~~~-~---------- 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--P-LVMQCQREQG-D---------- 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--C-CSEEEECCTT-C----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--C-chheeeccCC-C----------
Confidence 4678999999999999999999999999985432 334444 687 2 2222222111 0
Q ss_pred hHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCC-CEEEEEcCCcCCHHhhhcCCceE
Q psy10301 705 QQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 705 ~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~-~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
.+-.|+-|..+.+.+ .... +.++|+||..+|+.|-++|++-.
T Consensus 251 ---------------~kp~p~~~~~~~~~~-----~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 ---------------TRKDDVVKEEIFWKH-----IAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ---------------CSCHHHHHHHHHHHH-----TTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---------------CcHHHHHHHHHHHHH-----hccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 012356666666654 2333 45688999999999999999754
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.05 E-value=0.16 Score=54.89 Aligned_cols=42 Identities=12% Similarity=0.204 Sum_probs=34.3
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNI---NTARSIATKCGIV 679 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~---~ta~~ia~~~Gi~ 679 (1119)
.++.|++.++++.|++.|+++.++||... ..+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35779999999999999999999999984 3444555777884
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=90.74 E-value=0.19 Score=54.18 Aligned_cols=114 Identities=15% Similarity=0.229 Sum_probs=70.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC---GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~---Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+..--+. ++.+ +.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~--i~~~-~~---------------------- 184 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDT-KI---------------------- 184 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE--EECG-GG----------------------
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE--EEec-CC----------------------
Confidence 68899999999999999999999999988887776644 45321111 1111 11
Q ss_pred eEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE-EEccCcc---HHHHhccCeeec
Q psy10301 716 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGT---DVAKEASDIILT 785 (1119)
Q Consensus 716 ~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi-amg~~g~---~~ak~aaDiil~ 785 (1119)
. ..|+- .+.+.+.+. ++...+.++|+||..+|+.+-++|++-. .+...+. +.....+|.++.
T Consensus 185 ----~-~KP~p--~~~~~~~~~-lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 185 ----G-HKVES--ESYRKIADS-IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp ----C-CTTCH--HHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred ----C-CCCCH--HHHHHHHHH-hCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 0 12221 122222111 2455567899999999999999999753 3321121 112234677765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=88.45 E-value=0.31 Score=52.22 Aligned_cols=40 Identities=15% Similarity=0.266 Sum_probs=33.5
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCcC
Q psy10301 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVK 680 (1119)
Q Consensus 641 r~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~----~Gi~~ 680 (1119)
-+++.++++.+++.|+++.++||....+...+++. +|+..
T Consensus 23 ~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 23 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 37889999999999999999999988777776665 88743
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=85.01 E-value=0.29 Score=53.80 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=27.0
Q ss_pred Hhhccccccchhhhhhc---------CCeEEEEeCCCCccccCCe
Q psy10301 396 MMKDNNLVRHLDACETM---------GNATAICSDKTGTLTTNRM 431 (1119)
Q Consensus 396 m~k~~ilvr~~~~~E~l---------G~v~~Ic~DKTGTLT~n~m 431 (1119)
+.|.++++|++.++|.+ .+.. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 46789999999999874 2344 56799999998543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=84.25 E-value=1 Score=43.74 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=33.4
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCC
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDN---INTARSIATKCGI 678 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~---~~ta~~ia~~~Gi 678 (1119)
+-|++.++|++++++|++++++||++ ...+....++.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 34689999999999999999999998 5566777778887
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=83.07 E-value=0.32 Score=50.63 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=25.9
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTA 669 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta 669 (1119)
+.+++.+.++.|+++|+++.++|+.....+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~ 118 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKT 118 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence 467899999999999999999999875433
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=82.12 E-value=1.1 Score=47.45 Aligned_cols=131 Identities=11% Similarity=0.224 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+...-+ .++.+.+..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd--~i~~~~~~~------------------------ 146 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFT--FCADASQLK------------------------ 146 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCS--EECCGGGCS------------------------
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccc--ccccccccc------------------------
Confidence 4689999999999999999999997653 556678888843211 122222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCccHHHHhccCeeeccC---ChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGTDVAKEASDIILTDD---NFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g~~~ak~aaDiil~d~---~f~~i~~ 794 (1119)
+..|+-. -+...+.+ ++...+.++++||+.+|+.+-++|++- |+++ .|. ..+|.++.+. .+..+.
T Consensus 147 --~~KP~p~-~~~~a~~~--lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~~~~l~~~~l~- 215 (243)
T 4g9b_A 147 --NSKPDPE-IFLAACAG--LGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPSTESLTWPRLS- 215 (243)
T ss_dssp --SCTTSTH-HHHHHHHH--HTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESSGGGCCHHHHH-
T ss_pred --CCCCcHH-HHHHHHHH--cCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCChhhcCHHHHH-
Confidence 1123211 11222222 355667889999999999999999863 3333 231 2356655421 223332
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q psy10301 795 AVMWGRNVYDSISKFLQFQL 814 (1119)
Q Consensus 795 ~i~~GR~~~~~i~k~i~f~l 814 (1119)
..++++...+.|+.
T Consensus 216 ------~~~~~l~~~l~~~~ 229 (243)
T 4g9b_A 216 ------AFWQNVAENLYFQS 229 (243)
T ss_dssp ------HHHHHHSCCGGGC-
T ss_pred ------HHHHHHHHHhhhhh
Confidence 33556666665543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=81.75 E-value=29 Score=35.01 Aligned_cols=15 Identities=13% Similarity=-0.091 Sum_probs=13.7
Q ss_pred CccccCCeEEEEEEE
Q psy10301 424 GTLTTNRMTAVQAYV 438 (1119)
Q Consensus 424 GTLT~n~m~v~~~~~ 438 (1119)
||||+|++.|+++..
T Consensus 1 GTLT~G~p~V~~v~~ 15 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKV 15 (185)
T ss_dssp CCCCSCCCEEEEEEE
T ss_pred CCCcCCcEEEEEEEe
Confidence 899999999998865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1119 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-40 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-39 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-21 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-32 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-24 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-18 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-17 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-14 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-10 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 9e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 3e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 7e-04 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 143 bits (361), Expect = 6e-40
Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 624 IVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683
I S T DP R EV +I+ C+ AGI + M+TGDN TA +I + GI E
Sbjct: 5 ICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 64
Query: 684 DY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 741
+ G+EF+ + R AR PS K +V+ + +
Sbjct: 65 EVADRAYTGREFDDLPLAEQ--------REACRRACCFARVEPSHKSKIVEYLQ-----S 111
Query: 742 GREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWG 799
E+ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L DDNFS+IV AV G
Sbjct: 112 YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 151 bits (382), Expect = 2e-39
Identities = 54/280 (19%), Positives = 104/280 (37%), Gaps = 34/280 (12%)
Query: 757 PALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 816
P A + + + +AK+ + + S+ GR +Y+++ +F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 817 NVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKA 876
NV V+ F+ A L VQ+LWVNL+ D L + AL P D++ R P +
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 877 LISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSL--------------- 921
LIS + + Y G + + G G Y L
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWW--FMYAEDGPGVTYHQLTHFMQCTEDHPHFEG 363
Query: 922 -------PTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVITMVSQ 974
+ T+ + V + + N +N+ + Q + + N ++M
Sbjct: 364 LDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN-QSLMRMPPWVNIWLLGSICLSMSLH 422
Query: 975 VIIVQYGGI--AFATHSLTLEQWGWCLFFGVGTLVWQQIV 1012
+I+ + F +L L QW L + + +I+
Sbjct: 423 FLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEIL 462
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.5 bits (237), Expect = 4e-21
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 287 EESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKK 346
E +A AI+ ++ K+ LQ KL + Q+ S I + +I I
Sbjct: 109 ERNAENAIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH----- 163
Query: 347 FVIEDEEWKAIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHL 406
D + R + +F + V + V A+PEGLP +T LA ++M K N +VR L
Sbjct: 164 --FNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSL 221
Query: 407 DACETMGNATAICSDK--TGTLTTNRMTAVQAYVCEV 441
+ ET+G A + +++N V ++
Sbjct: 222 PSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA 258
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.6 bits (232), Expect = 2e-20
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 38 GVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIIL 97
E S GL + ++ E +G N +P + K+ +LV E +D+ + IL
Sbjct: 8 STEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 98 EIAALVSLGLSFYHPGGESEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRG 157
+AA +S L+++ G E+ ++E IL+ +I +V + + + E
Sbjct: 66 LLAACISFVLAWFEEGEETITA-------FVEPFVILLILIANAIVGVWQERNAENAIEA 118
Query: 158 LQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYGDLLPADGILI 205
L+ + D ++G+ L LI
Sbjct: 119 LKEYEPAATE--------------QDKTPLQQKLDEFGEQLSKVISLI 152
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 127 bits (321), Expect = 3e-32
Identities = 47/406 (11%), Positives = 108/406 (26%), Gaps = 69/406 (16%)
Query: 402 LVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIV 461
+ L +G + I + + ++ K K + +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL--KSLGLNSNWDML-- 81
Query: 462 EGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRV 521
I+ + ++ K++ + A + + Q + +L +
Sbjct: 82 -----------FIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLN- 129
Query: 522 YTFNSVRKSMSTV-IPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRN 580
+ + V + K N Y + A+ + + L +
Sbjct: 130 --EQLPLQFLDNVKVGKNNIYAALEEFATTELHV-------SDATLFSL---------KG 171
Query: 581 VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPV 640
+ +A + + + K + D E I I E +
Sbjct: 172 ALWTLAQEVYQEWYLGSKLYE-----------------DVEKKIARTTFKTGYIYQEIIL 214
Query: 641 --RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVR 698
EV + + AG + + TG G++ E I +
Sbjct: 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN 274
Query: 699 DNNGEVQQNLLDK-VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGP 757
+ + + Y + I +K + V + GD D
Sbjct: 275 MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK-----DDVFIVGDSLADLL 329
Query: 758 ALKKAD---VGFAMGITGTDVAKE----ASDIILTDDNFSSIVKAV 796
+ +K +G G+ G D A E +D ++ ++ + +
Sbjct: 330 SAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 112 bits (281), Expect = 1e-28
Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 19/221 (8%)
Query: 431 MTAVQAYVCEVQYK------NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 484
MT + ++ D + + + + K +
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 485 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG---Y 541
G+ +E ALL + + + +RD P+ +FNS K ++ +++ +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPK---VAEISFNSTNKYQLSIHEREDNPQSH 118
Query: 542 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 601
+ KGA E IL +CS I + + + +N + G R + +
Sbjct: 119 VLVMKGAPERILDRCSSILVQGKEIPLDKEMQD--AFQNAYLELGGLGERVLGFCQLNLP 176
Query: 602 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 642
+ K + D+ + L + ++ + D
Sbjct: 177 SGKFPRGF-----KFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 95.9 bits (238), Expect = 8e-24
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 44/173 (25%)
Query: 624 IVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 683
++ T G D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 6 VIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA 65
Query: 684 DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGR 743
+ P K VK + +
Sbjct: 66 EV-------------------------------------LPHQKSEEVKKL------QAK 82
Query: 744 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
EVVA GDG ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 83 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.2 bits (207), Expect = 1e-18
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 25/179 (13%)
Query: 477 PENANELPKQVGNKTECALLGFVVAIGKNYQTVRD-----------DLPEEVFTRVYT-- 523
+ ++VG TE AL V + VR+ + ++ + +T
Sbjct: 67 FNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 126
Query: 524 FNSVRKSMSTVIPKKNG------YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 577
F+ RKSMS +++ KGA E ++ +C+Y+ + + L
Sbjct: 127 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKIL 186
Query: 578 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGI 636
D LR +++A +D + E+ + + LT + V+G+
Sbjct: 187 SVIKEWGTGRDTLRCLALATRDTPPKREEMVL------DDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 79.3 bits (194), Expect = 5e-17
Identities = 31/242 (12%), Positives = 67/242 (27%), Gaps = 31/242 (12%)
Query: 572 DMQGRLVRN-----VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVS 626
D G + N +++ A + E P+ E
Sbjct: 10 DFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE---- 65
Query: 627 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL 686
+ + +R E + I +++G +
Sbjct: 66 ---ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVE-------- 114
Query: 687 ILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVV 746
+ N DN+ +D + K +++ ++S + +
Sbjct: 115 -KDRIYCNHASFDND----YIHIDWPHSCKGTCSNQCGCCKPSVIH-----ELSEPNQYI 164
Query: 747 AVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 806
+ GD D A K +D+ FA + +E + L +F I K + + V + +
Sbjct: 165 IMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223
Query: 807 SK 808
Sbjct: 224 QN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 68.6 bits (167), Expect = 2e-14
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 170 VIRQNE--LKQIFVGDIVVGDICQIKYGDLLPADGILI--QSNDLKIDESSLTGESDHVK 225
V R + +++I DIV GDI ++ GD +PAD ++ +S L++D+S LTGES V
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 226 KGE-----------LFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLL 265
K M+ SGT++ G +V GV+++ G I +
Sbjct: 65 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 60.4 bits (145), Expect = 1e-10
Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 46/202 (22%)
Query: 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRD 699
+ + EAI++ + GI I +VTG+ + A + + G P +R+
Sbjct: 20 IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 79
Query: 700 NNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKISAGREV------------ 745
+ + + L +++ R + + P + LV + RE+
Sbjct: 80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVD 139
Query: 746 -------------------------------VAVTGDGTNDGPALKKADVGFAMGITGTD 774
VA GDG ND A K A+
Sbjct: 140 SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPK 198
Query: 775 VAKEASDIILTDDNFSSIVKAV 796
+ KE +D + + +A+
Sbjct: 199 ILKENADYVTKKEYGEGGAEAI 220
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 44/203 (21%)
Query: 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP---GEDYLILEGKEF 693
+ + + E+I+ ++ G+T+ +++G+ I ++ GI P ++ +
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 694 NRRVRDNNG-----------------------------EVQQNLLDKVWPRLRVLARSSP 724
++ N G ++ +D V
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 725 SDKYTLVKGMIDSKISAGREV-----------VAVTGDGTNDGPALKKADVGFAMGITGT 773
Y+ + + V GD ND P + T
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NAT 196
Query: 774 DVAKEASDIILTDDNFSSIVKAV 796
D K SD + I +
Sbjct: 197 DNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.9 bits (113), Expect = 1e-06
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 744 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797
V GD ND L +A G +V +E + + + +
Sbjct: 146 YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFL 197
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 20/156 (12%)
Query: 632 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 691
+ + P + E + + Q + + +++G + +A+K +
Sbjct: 75 LIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPATNVFANRL 131
Query: 692 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 751
+F + Q + S V ++ K + ++ GD
Sbjct: 132 KFYFNGEYAGFDETQPTAE--------------SGGKGKVIKLLKEKFHFKKIIM--IGD 175
Query: 752 GTNDGPALKKADVGFAMG-ITGTDVAKEASDIILTD 786
G D A AD G K+ + +TD
Sbjct: 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 750 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
GDG ND KKA + A + KE +DI + + I+K +
Sbjct: 165 GDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYI 209
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 9e-05
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 4/147 (2%)
Query: 663 GDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 722
+ + + + I + + E V D ++ V +
Sbjct: 126 AKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLI 185
Query: 723 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 782
P + + + V GD ND LK A FAMG + K+ +
Sbjct: 186 IPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARY 244
Query: 783 ILTDDNFSSIVKAVMWGRNVYDSISKF 809
D+N + + + V D+ F
Sbjct: 245 ATDDNNHEGALNVI---QAVLDNTYPF 268
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 42.7 bits (99), Expect = 1e-04
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 1/118 (0%)
Query: 680 KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKI 739
+ +I+ ++ V N + +N L + +
Sbjct: 160 RTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY 219
Query: 740 SAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797
+ + V V GD ND L FA+ TD AK + +L + V ++
Sbjct: 220 NISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLL 276
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 3e-04
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 744 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
E AV GD ND L+ A G AMG + K +D + ++ + +
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMM 281
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.4 bits (96), Expect = 3e-04
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 785
K + +I E ++ GDG ND L+ A +G AMG + K A+D +
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSF-GDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTA 243
Query: 786 DDNFSSIVKAV 796
+ I KA+
Sbjct: 244 PIDEDGISKAM 254
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 743 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
E + GD ND ++ A VG A+ KE ++ + + + A+
Sbjct: 213 PEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAI 265
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 685 YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGRE 744
L+++ E +++ E ++++ L + + +++ +E
Sbjct: 148 LLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKE 207
Query: 745 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796
+ V GD ND ++A + AM + KEASDI+ +N S + +
Sbjct: 208 EIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVL 258
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1119 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.92 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.21 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.19 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.06 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.95 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.94 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.93 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.88 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.84 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.76 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.69 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.65 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.62 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.58 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.58 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.31 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.97 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.68 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.16 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.06 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.78 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.75 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.74 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.7 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.38 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.14 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.81 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.54 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.42 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.05 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 94.77 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.71 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.49 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.65 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.29 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.02 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.43 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.39 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 90.7 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 88.65 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 87.27 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.71 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 85.83 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 85.1 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 82.8 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 81.98 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 80.91 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.2e-48 Score=460.34 Aligned_cols=442 Identities=24% Similarity=0.357 Sum_probs=352.9
Q ss_pred hCCHHHHHHHhCCCCCCCCCCChHHHHHHHHhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCCCCC
Q psy10301 36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115 (1119)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~~~~~r~~~~G~N~i~~~~~~~f~~l~~~~~~~~~~iil~iaailsl~l~~~~~~~~ 115 (1119)
-.++||++++|+||+++||| ++|+++||++||+|++|+++++++|++++++|+|++.++|++||++|++++.+.+.
T Consensus 6 ~~~~e~v~~~l~td~~~GLs--~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~-- 81 (472)
T d1wpga4 6 SKSTEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG-- 81 (472)
T ss_dssp GSCHHHHHHHHTCCTTTCBC--HHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT--
T ss_pred hCCHHHHHHHhCcCcccCcC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc--
Confidence 36899999999999999999 99999999999999999999999999999999999999999999999999887532
Q ss_pred CCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcCCCeEEEEeCCEEEEEEcCCcccCcEEEEcCC
Q psy10301 116 SEHDNEETKYEWIEGAAILVSVIVVVLVTAFNDYSKEKQFRGLQNQIEGEHKFAVIRQNELKQIFVGDIVVGDICQIKYG 195 (1119)
Q Consensus 116 ~~~~~~~~~~~~~e~~~il~~vi~v~~v~~~~~~~~~k~~~~L~~~~~~~~~~~ViR~g~~~~I~~~dLvvGDIV~l~~G 195 (1119)
.+...+|+++++|++.++++..++.++|++.+|...++++..+.. ..
T Consensus 82 -----~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~---------------------------~~- 128 (472)
T d1wpga4 82 -----EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA---------------------------TE- 128 (472)
T ss_dssp -----TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC---------------------------CC-
T ss_pred -----cccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc---------------------------cc-
Confidence 223356999999999999999999999999999888887653210 00
Q ss_pred CeecccEEEEeeCceEEecccCCCCCcccccCCCCCccccccceeeecceEEEEEEecccchhhHHHHhhcCCchhhHHH
Q psy10301 196 DLLPADGILIQSNDLKIDESSLTGESDHVKKGELFDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGATDDEEVKQ 275 (1119)
Q Consensus 196 d~vPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll~~~~~~~~~~ 275 (1119)
T Consensus 129 -------------------------------------------------------------------------------- 128 (472)
T d1wpga4 129 -------------------------------------------------------------------------------- 128 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcccccchhhhhccccccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccchhH
Q psy10301 276 EKKDKKKKKRDEESAIEAIDMKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWK 355 (1119)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~s~lq~kl~~la~~i~~~~~~~~~l~~ii~i~~~~~~~~~~~~~~~~ 355 (1119)
.+++|+|.++++++..++..+..++...+.+.+..+. ....+..|
T Consensus 129 -------------------------------~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 173 (472)
T d1wpga4 129 -------------------------------QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN---DPVHGGSW- 173 (472)
T ss_dssp -------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSS---SCCSSSCS-
T ss_pred -------------------------------ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhh-
Confidence 2356778888888888877666555554443322211 11122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhccccccchhhhhhcCCeEEEEeCCCCccccCCeEEEE
Q psy10301 356 AIYFREFVRFFMVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQ 435 (1119)
Q Consensus 356 ~~~~~~~~~~~~~~i~vlv~avP~~Lplavti~l~~~~~~m~k~~ilvr~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~ 435 (1119)
.+.++..|+.+++++|+++|||||+++|++++++++||+|+|++||++++||++|+.+++|+|||
T Consensus 174 ---~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~------------ 238 (472)
T d1wpga4 174 ---IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQF------------ 238 (472)
T ss_dssp ---SSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHH------------
T ss_pred ---HHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHh------------
Confidence 12235678889999999999999999999999999999999999999998888776655555554
Q ss_pred EEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcCCc
Q psy10301 436 AYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPE 515 (1119)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~ 515 (1119)
T Consensus 239 -------------------------------------------------------------------------------- 238 (472)
T d1wpga4 239 -------------------------------------------------------------------------------- 238 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHHHhhccCceEEE
Q psy10301 516 EVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISI 595 (1119)
Q Consensus 516 ~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~l 595 (1119)
T Consensus 239 -------------------------------------------------------------------------------- 238 (472)
T d1wpga4 239 -------------------------------------------------------------------------------- 238 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy10301 596 AYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 675 (1119)
Q Consensus 596 Ayr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~ 675 (1119)
T Consensus 239 -------------------------------------------------------------------------------- 238 (472)
T d1wpga4 239 -------------------------------------------------------------------------------- 238 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCC
Q psy10301 676 CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND 755 (1119)
Q Consensus 676 ~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND 755 (1119)
T Consensus 239 -------------------------------------------------------------------------------- 238 (472)
T d1wpga4 239 -------------------------------------------------------------------------------- 238 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHhccCCCC
Q psy10301 756 GPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP 835 (1119)
Q Consensus 756 ~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~GR~~~~~i~k~i~f~l~~nv~~i~~~f~~~~~~~~sp 835 (1119)
++|+++.|+..++..+++.++..++|
T Consensus 239 ------------------------------------------------------i~~~l~~n~~~v~~~~~~~~l~~p~p 264 (472)
T d1wpga4 239 ------------------------------------------------------IRYLISSNVGEVVCIFLTAALGLPEA 264 (472)
T ss_dssp ------------------------------------------------------HHHHHHHHHHHHHHHHHHHHSCCCCS
T ss_pred ------------------------------------------------------hhhhhhhhHHHHHHHHHHHHcCCCcc
Confidence 33333333444445555677788899
Q ss_pred hhHHHHHHHHHHHhHHHHhHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC-
Q psy10301 836 LKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGR- 914 (1119)
Q Consensus 836 L~~~q~L~~nli~d~l~~laL~~e~p~~~l~~r~P~~~~~~li~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~- 914 (1119)
|+++|+||+|+++|++|+++|++|||++++|+|||++++++++++.++++++.++++..++++.++++...+.....+.
T Consensus 265 l~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (472)
T d1wpga4 265 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVT 344 (472)
T ss_dssp CCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCT
T ss_pred ccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999887777766543322111000
Q ss_pred ------------CCC-C------CCCCcchhhhhHHHHHHHhhhcccccccccCcccccc-ccccchhHHHHHHHHHHHH
Q psy10301 915 ------------GAE-Y------GSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTNPIFYSIWVITMVSQ 974 (1119)
Q Consensus 915 ------------~~~-~------~~~~~~~~t~~f~~~v~~q~fn~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~ 974 (1119)
+.+ . .....+++|++|++++++|+||.+++|+.+. ++|+ ++|+|++++.++++.+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~--s~~~~~~~~N~~l~~av~i~~~l~ 422 (472)
T d1wpga4 345 YHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ--SLMRMPPWVNIWLLGSICLSMSLH 422 (472)
T ss_dssp TSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSC--CTTTSCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCc--chhhcCccccHHHHHHHHHHHHHH
Confidence 000 0 0112346799999999999999999998653 5554 8899999999999999999
Q ss_pred HHHHhhc--cccceecccChhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Q psy10301 975 VIIVQYG--GIAFATHSLTLEQWGWCLFFGVGTLVWQQIVTTVPTKRL 1020 (1119)
Q Consensus 975 ~~~v~~~--~~~f~~~~l~~~~w~~~~~~~~~~l~~~~~vk~i~~~~~ 1020 (1119)
+++++++ +.+|++.||++.+|++++.++++.++++|++|++.++++
T Consensus 423 ~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 423 FLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9998876 478999999999999999999999999999999876653
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=2.4e-31 Score=269.02 Aligned_cols=148 Identities=45% Similarity=0.661 Sum_probs=133.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCce--EEEecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~--i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
||+|++++++|+.|+++||+|+|+|||+..||+++|++|||+.++.+. ..++|.+++.. ....+.++.++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~~ 90 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL--------PLAEQREACRR 90 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS--------CHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh--------hHHHHhhhhhh
Confidence 999999999999999999999999999999999999999998766542 35677777653 34455566677
Q ss_pred eEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 716 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 716 ~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
..+|+|++|+||..+|+.+ |..|++|+|+|||.||+|||++|||||+|+ +|+++|+++||+++++++|++|+++
T Consensus 91 ~~v~ar~~p~~K~~lv~~l-----~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~ 164 (168)
T d1wpga2 91 ACCFARVEPSHKSKIVEYL-----QSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA 164 (168)
T ss_dssp CCEEESCCHHHHHHHHHHH-----HHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH
T ss_pred hhhhhccchhHHHHHHHHH-----HhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH
Confidence 8999999999999999997 456899999999999999999999999999 8999999999999999999999999
Q ss_pred HHHH
Q psy10301 796 VMWG 799 (1119)
Q Consensus 796 i~~G 799 (1119)
|+||
T Consensus 165 I~~G 168 (168)
T d1wpga2 165 VEEG 168 (168)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=3.3e-28 Score=257.47 Aligned_cols=202 Identities=18% Similarity=0.160 Sum_probs=146.5
Q ss_pred CeEEEEEEEcCeEeecCCC------CCCCChHHHHHHHHHHHhccCCccccccCCC--CCCCcccccChhHHHHHHHHHH
Q psy10301 430 RMTAVQAYVCEVQYKNIPK------YEDIPEDIASKIVEGISVNSGYTSKIMAPEN--ANELPKQVGNKTECALLGFVVA 501 (1119)
Q Consensus 430 ~m~v~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~--~~~~~~~~g~~~E~ALl~~~~~ 501 (1119)
-|||+++|.+++.+..... ..+...+....|..+.++|+... +.+... ........|||||+||+.++..
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~--~~~~~~~~~~~~~~~~GdptE~ALl~~a~~ 78 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAV--FKAGQENISVSKRDTAGDASESALLKCIEL 78 (214)
T ss_dssp CCEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCC--CC----------CCCCSCHHHHHHHHHHHH
T ss_pred CeEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCc--cccCCCCCcccccccccChHHHHHHHHHHH
Confidence 3999999999998763321 11123344455666666665443 111111 1122356899999999999999
Q ss_pred cCCChhhhhhcCCccceeeeecCCCCcceEEEEEec---CCeeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHH
Q psy10301 502 IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK---KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLV 578 (1119)
Q Consensus 502 ~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~---~~~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~ 578 (1119)
.|.++..++..++ .+..+||||.||+|+++++. ++.+++|+|||||+|+++|++++. +|...+++++.++.+
T Consensus 79 ~~~~~~~~r~~~~---~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i- 153 (214)
T d1q3ia_ 79 SCGSVRKMRDRNP---KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAF- 153 (214)
T ss_dssp HHSCHHHHHHTSC---EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH-
T ss_pred hCCCHHHHHhhCc---EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHH-
Confidence 9999998888765 47889999999999999986 356899999999999999999875 788999999998886
Q ss_pred HHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCcc
Q psy10301 579 RNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPE 643 (1119)
Q Consensus 579 ~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~~ 643 (1119)
.+.++.||++|+||||+|||+++.++...+. ..+.++.+.+++||+|+|++||+||||+.
T Consensus 154 ~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~-----~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 154 QNAYLELGGLGERVLGFCQLNLPSGKFPRGF-----KFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEECTTTSCTTC-----CCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HHHHHHHhhCCcEEEEEEEEecCcccccccc-----ccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 5788999999999999999999876543221 12233345678999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=4.4e-27 Score=228.17 Aligned_cols=125 Identities=39% Similarity=0.614 Sum_probs=108.1
Q ss_pred EEEEEeeccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHH
Q psy10301 629 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 708 (1119)
Q Consensus 629 ~~lG~igieDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~ 708 (1119)
+..+.++++|++||+++++|+.|+++||+++|+|||+..+|.++|++|||-
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 344578999999999999999999999999999999999999999999992
Q ss_pred HhhhcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC
Q psy10301 709 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 788 (1119)
Q Consensus 709 ~~~i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~ 788 (1119)
.++++++|++|..+|+.+ |. +++|+|+|||.||+|||++|||||||+ ++++.++++||+++++++
T Consensus 62 --------~v~~~~~p~~k~~~v~~~-----q~-~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~ 126 (135)
T d2b8ea1 62 --------LVIAEVLPHQKSEEVKKL-----QA-KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDD 126 (135)
T ss_dssp --------EEECSCCHHHHHHHHHHH-----TT-TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCC
T ss_pred --------hhccccchhHHHHHHHHH-----Hc-CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCC
Confidence 589999999999999986 33 568999999999999999999999999 899999999999999999
Q ss_pred hhHHHHHHH
Q psy10301 789 FSSIVKAVM 797 (1119)
Q Consensus 789 f~~i~~~i~ 797 (1119)
|++|+++|+
T Consensus 127 l~~i~~aI~ 135 (135)
T d2b8ea1 127 LRDVVAAIQ 135 (135)
T ss_dssp THHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.92 E-value=3.7e-30 Score=296.62 Aligned_cols=331 Identities=13% Similarity=0.060 Sum_probs=217.2
Q ss_pred cchhhhhhcCCeEEEEeCCCCccccCCeEEEEEEEcCeEeecCCCCCCCChHHHHHHHHHHHhccCCccccccCCCCCCC
Q psy10301 404 RHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANEL 483 (1119)
Q Consensus 404 r~~~~~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~s~~~~~~~~~~~ 483 (1119)
+-+.+.|+||..+++|+|||||+|.|+|++..+..+...+.. +...++.+. +++....+++... .
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~--k~~g~n~~~-dl~~~~~~~~~~~------------~ 92 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL--KSLGLNSNW-DMLFIVFSIHLID------------I 92 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH--HHTTCCCHH-HHHHHHHHHHHHH------------H
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhh--hhcCCChhH-HHHHHHHHHHHHH------------H
Confidence 345667999999999999999999999987543211000000 001111111 1111111111110 0
Q ss_pred cccccChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEec-CCeeEEEEeCccHHHHhhccccccc
Q psy10301 484 PKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGR 562 (1119)
Q Consensus 484 ~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~-~~~~~l~~KGA~e~il~~c~~~~~~ 562 (1119)
....+++++.+++......+......+..++. ....||+|.+|+|+++... ++.+.++.||+++.+.-.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----- 164 (380)
T d1qyia_ 93 LKKLSHDEIEAFMYQDEPVELKLQNISTNLAD---CFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA----- 164 (380)
T ss_dssp HTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSS---CCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCSCC-----
T ss_pred HhhcCCCcHHHHHHHHhhccchHHHHHHhccc---cccCCcchHHHHHhhhcccccchhHhhhhccHhhcCCcHH-----
Confidence 12346677877776543333333344444433 3467999999999987765 44455666777766532111
Q ss_pred CCeeecCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCCc
Q psy10301 563 NGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 642 (1119)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr~ 642 (1119)
.+.+ ++..+..|+.+|+|++++||+.++..+. ....+....|+++.+||+||
T Consensus 165 ----------~~~~-~~~~~~~~a~~~~r~l~~~~~~~~~~~~-----------------~~~~~~~~~g~i~~~~~i~p 216 (380)
T d1qyia_ 165 ----------TLFS-LKGALWTLAQEVYQEWYLGSKLYEDVEK-----------------KIARTTFKTGYIYQEIILRP 216 (380)
T ss_dssp ----------GGGS-TTCHHHHHHHHHHHHHHHHHHHHHHHHC-----------------SCCSCSSCCCTTTTCCBSSC
T ss_pred ----------HHHH-HHhHHHHHHHHHHHHHHHhhhccccccc-----------------ccchhhHhcccccccccccc
Confidence 1111 1345678999999999999987643211 01122334588899999665
Q ss_pred --cHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcC-----chhhhHHHHhhhcCc
Q psy10301 643 --EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDN-----NGEVQQNLLDKVWPR 715 (1119)
Q Consensus 643 --~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~-----~~~~~~~~~~~i~~~ 715 (1119)
+++++++.|+++|++++|+|||+..+|+.+++++||...-+...++++.+........ .+.-.++.+..
T Consensus 217 ~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~---- 292 (380)
T d1qyia_ 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA---- 292 (380)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH----
T ss_pred hhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHH----
Confidence 9999999999999999999999999999999999997543333455666554322111 11111111211
Q ss_pred eEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCC---ceEEEccCccHHHHh----ccCeeeccCC
Q psy10301 716 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKE----ASDIILTDDN 788 (1119)
Q Consensus 716 ~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~Ad---VGiamg~~g~~~ak~----aaDiil~d~~ 788 (1119)
..+++|++|++|..+++.+ +..++.|+|+|||.||++|+|+|| |||+||..|++++++ .||+++. +
T Consensus 293 ~~~~~~~~~~~k~~iv~~~-----~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~ 365 (380)
T d1qyia_ 293 ALYGNNRDKYESYINKQDN-----IVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--H 365 (380)
T ss_dssp HHHCCCGGGHHHHHHCCTT-----CSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--S
T ss_pred HHHHcCCCHHHHHHHHHHh-----CCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--C
Confidence 2356899999999999874 888999999999999999999999 999999888877655 8999996 7
Q ss_pred hhHHHHHH
Q psy10301 789 FSSIVKAV 796 (1119)
Q Consensus 789 f~~i~~~i 796 (1119)
+..|.+++
T Consensus 366 ~~el~~il 373 (380)
T d1qyia_ 366 LGELRGVL 373 (380)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 87776554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.5e-24 Score=203.17 Aligned_cols=99 Identities=35% Similarity=0.475 Sum_probs=90.2
Q ss_pred eEEEEeCCEE--EEEEcCCcccCcEEEEcCCCeecccEEEEe--eCceEEecccCCCCCcccccCCC-----------CC
Q psy10301 167 KFAVIRQNEL--KQIFVGDIVVGDICQIKYGDLLPADGILIQ--SNDLKIDESSLTGESDHVKKGEL-----------FD 231 (1119)
Q Consensus 167 ~~~ViR~g~~--~~I~~~dLvvGDIV~l~~Gd~vPaDgill~--g~~l~VDES~LTGES~pv~K~~~-----------~~ 231 (1119)
+++|+|+|++ ++|+++||||||||.|++||.|||||+|+. +.+++||||+|||||.|+.|.+. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 6799999984 789999999999999999999999999986 55589999999999999999752 45
Q ss_pred ccccccceeeecceEEEEEEecccchhhHHHHhh
Q psy10301 232 PMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLL 265 (1119)
Q Consensus 232 ~~l~sGt~v~~G~~~~~V~~vG~~t~~g~i~~ll 265 (1119)
|++|+||.|.+|+++++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 7899999999999999999999999999998754
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=6.9e-23 Score=220.10 Aligned_cols=169 Identities=21% Similarity=0.272 Sum_probs=124.6
Q ss_pred HHHHHHHHHhccCCccccccCCCCCCCcccccChhHHHHHHHHHHcCCChhhhhhcC-------------Cccceeeeec
Q psy10301 457 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDL-------------PEEVFTRVYT 523 (1119)
Q Consensus 457 ~~~l~~~i~~~~~~~s~~~~~~~~~~~~~~~g~~~E~ALl~~~~~~g~~~~~~~~~~-------------~~~~i~~~~~ 523 (1119)
++.++.+.++|+... ......++.....|+|||+||+.++.+.|.++...+... ..+..+..+|
T Consensus 50 l~~ll~~~~LCn~a~---l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 126 (239)
T d1wpga3 50 LVELATICALCNDSS---LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 126 (239)
T ss_dssp HHHHHHHHHHSCSCE---EEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHhcCCCE---eeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEee
Confidence 444555555555433 112223345677899999999999999987765543211 1244678899
Q ss_pred CCCCcceEEEEEecCC------eeEEEEeCccHHHHhhcccccccCCeeecCCHHHHHHHHHHHHHH--HhhccCceEEE
Q psy10301 524 FNSVRKSMSTVIPKKN------GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEP--MACDGLRTISI 595 (1119)
Q Consensus 524 F~s~rk~msvvv~~~~------~~~l~~KGA~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~a~~GlRtl~l 595 (1119)
|||.||||+|+++.++ .+++|+|||||.||++|++++. ++...+++++.++.+. +.++. ||++||||||+
T Consensus 127 F~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~-~~~~~~~~a~~glRvLa~ 204 (239)
T d1wpga3 127 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKIL-SVIKEWGTGRDTLRCLAL 204 (239)
T ss_dssp EETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHH-HHHHHHTTSSCCCEEEEE
T ss_pred ecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHH-HHHHHHhHhhCCCEEEEE
Confidence 9999999999998722 4799999999999999998876 6778899999998875 45565 48899999999
Q ss_pred EEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeec
Q psy10301 596 AYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGI 636 (1119)
Q Consensus 596 Ayr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igi 636 (1119)
|||+++.+..... ..+....+++|+||+|+|++||
T Consensus 205 A~k~~~~~~~~~~------~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 205 ATRDTPPKREEMV------LDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEESSCCCGGGCC------TTCGGGHHHHTCSEEEEEEEEE
T ss_pred EEEECCccccccc------ccchhhHHHhcCCCEEEEEECC
Confidence 9999986543221 1122345678999999999996
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.21 E-value=2.8e-11 Score=126.63 Aligned_cols=156 Identities=20% Similarity=0.258 Sum_probs=111.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh----------------------HHHH
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE----------------------FNRR 696 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~----------------------~~~~ 696 (1119)
.+.+++.++|++|+++|++|+++||++...+..++..+++-. .++..+|.. +...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~---~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKR 95 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc---ccccccceeeeccccccccccccHHHHHHHHHHHh
Confidence 467889999999999999999999999999999999998732 222222211 0000
Q ss_pred hhcC--------------------chhhhHHHHhhhcCceE-------EEEecChhhHHHHHHHHHHhhcCCCCCEEEEE
Q psy10301 697 VRDN--------------------NGEVQQNLLDKVWPRLR-------VLARSSPSDKYTLVKGMIDSKISAGREVVAVT 749 (1119)
Q Consensus 697 ~~~~--------------------~~~~~~~~~~~i~~~~~-------v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~i 749 (1119)
..+. ..+...+.+++...... +-.......|...++.+.+. ++...+.++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~-~~i~~~~~~~i 174 (230)
T d1wr8a_ 96 FPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF-LGIKPKEVAHV 174 (230)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH-HTSCGGGEEEE
T ss_pred cccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccc-cccchhheeee
Confidence 0000 00011122222222221 22233456899999988765 45566778999
Q ss_pred cCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHHH
Q psy10301 750 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWG 799 (1119)
Q Consensus 750 GDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~G 799 (1119)
|||.||.+||+.|++||||| ++.+.+|++||+|+.+++..++.++|.+.
T Consensus 175 GD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 175 GDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp ECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 99999999999999999999 89999999999999998999999887653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.19 E-value=2.1e-11 Score=128.12 Aligned_cols=156 Identities=17% Similarity=0.174 Sum_probs=109.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh----------------HHHHh---h
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE----------------FNRRV---R 698 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~----------------~~~~~---~ 698 (1119)
..+.+++.+++++|++.|++++++||++...+..++...|+.. .++..+|.. ..... .
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMS 95 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999832 223222211 00000 0
Q ss_pred cC-------------------chhhhHHHH-hhh-cCceEEE-----Ee--cChhhHHHHHHHHHHhhcCCCCCEEEEEc
Q psy10301 699 DN-------------------NGEVQQNLL-DKV-WPRLRVL-----AR--SSPSDKYTLVKGMIDSKISAGREVVAVTG 750 (1119)
Q Consensus 699 ~~-------------------~~~~~~~~~-~~i-~~~~~v~-----ar--~sP~~K~~iV~~l~~~~~~~~~~~V~~iG 750 (1119)
.. ......+.+ ... .....++ .. ....+|...++.+.++ ++...+.|+++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~-~~i~~~~v~~~G 174 (225)
T d1l6ra_ 96 KRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEILVIG 174 (225)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEEC
T ss_pred HhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhh-hccchhheeeec
Confidence 00 000001111 111 1111221 11 2235899999988765 466667788899
Q ss_pred CCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 751 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 751 DG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
||.||.+|++.|++||||+ ++.+.+|+.||+++..++..+|.+++++
T Consensus 175 Ds~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 175 DSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999999 8999999999999999999999988863
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=3.4e-10 Score=121.85 Aligned_cols=157 Identities=18% Similarity=0.280 Sum_probs=110.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhH-------------------HHH---
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF-------------------NRR--- 696 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~-------------------~~~--- 696 (1119)
.+-+++.+++++|+++|++++++||++...+..+.+++++..+...++..+|... ...
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 4678899999999999999999999999999999999998765444444333210 000
Q ss_pred hhc-----------------C--------------------------------------chhhhHHHHhhh----cCceE
Q psy10301 697 VRD-----------------N--------------------------------------NGEVQQNLLDKV----WPRLR 717 (1119)
Q Consensus 697 ~~~-----------------~--------------------------------------~~~~~~~~~~~i----~~~~~ 717 (1119)
... . ......+.+..+ ..+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 000 0 000000001100 01111
Q ss_pred E------EEecChh--hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCCh
Q psy10301 718 V------LARSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF 789 (1119)
Q Consensus 718 v------~ar~sP~--~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f 789 (1119)
+ +....|. +|...++.++++ ++-....++++|||.||.+||+.|+.|+||+ ++.+.+|+.||+++.+++-
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~-~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADV-LGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTT
T ss_pred EEEecCceEEecCCCCCcccccceehhh-cccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCc
Confidence 1 1223343 799999998875 4555666889999999999999999999999 9999999999999998887
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
.++.++++
T Consensus 259 ~Gv~~~l~ 266 (271)
T d1rkqa_ 259 DGVAFAIE 266 (271)
T ss_dssp THHHHHHH
T ss_pred ChHHHHHH
Confidence 88888775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.95 E-value=1.3e-09 Score=118.09 Aligned_cols=70 Identities=23% Similarity=0.304 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.+. ++...+.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||+++.+++-.++.++|+
T Consensus 213 ~K~~ai~~l~~~-~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQ-LNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhh-cccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799999998776 4666677999999999999999999999999 899999999999999888888888875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=1.1e-09 Score=117.74 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=64.7
Q ss_pred ecChh--hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 721 RSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 721 r~sP~--~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
..+|. +|...++.+.++ ++...+.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+++.+++-.++.++|+
T Consensus 183 di~p~~~sK~~al~~l~~~-lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKR-WDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhh-hccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34453 699999998765 4666677899999999999999999999999 999999999999999888888888775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.93 E-value=1.4e-09 Score=109.17 Aligned_cols=113 Identities=21% Similarity=0.275 Sum_probs=92.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEEEEecChh
Q psy10301 646 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 725 (1119)
Q Consensus 646 ~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ar~sP~ 725 (1119)
.+|+.+++.|+.+.++||+....+...++++++. .++. ...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~-------------------------------------~~~~--~~~ 79 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK-------------------------------------LFFL--GKL 79 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC-------------------------------------EEEE--SCS
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc-------------------------------------cccc--ccc
Confidence 4899999999999999999999999999999983 1122 344
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCC----hhHHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWG 799 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~----f~~i~~~i~~G 799 (1119)
+|...++.+.++ ++...+.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+. .+.+.+.|...
T Consensus 80 ~K~~~l~~~~~~-~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 80 EKETACFDLMKQ-AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQA 155 (177)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH-hcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHHHH
Confidence 566666666554 3667788999999999999999999999999 999999999999998765 45555555433
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.88 E-value=1.7e-09 Score=115.82 Aligned_cols=71 Identities=28% Similarity=0.332 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
+|...++.+.++ ++...+.++++|||.||.+||+.|+.|+||+ ++++.+|+.||++..+++-.++.++|++
T Consensus 186 sK~~al~~l~~~-~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRH-FGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHh-ccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 799999998776 4666677888999999999999999999999 9999999999999998888899988863
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.84 E-value=6.8e-09 Score=111.80 Aligned_cols=70 Identities=26% Similarity=0.341 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccC-ChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDD-NFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~-~f~~i~~~i~ 797 (1119)
.|...++.+.+. ++...+.|+++|||.||.+||+.||.|+||+ ++.+.+|+.||+++..+ +...+.++++
T Consensus 207 ~K~~~l~~l~~~-~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKH-YNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhh-cccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 688888888765 4666778999999999999999999999999 99999999999999754 4445655554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.81 E-value=1e-08 Score=109.96 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+|...++.+.++ +......|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+++.+++-.++.++|+
T Consensus 190 ~K~~ai~~l~~~-~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRER-MNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHh-hccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799999998776 4556667888899999999999999999999 999999999999999888889888774
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=4.4e-09 Score=109.54 Aligned_cols=129 Identities=19% Similarity=0.266 Sum_probs=92.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+.. .+++.-+. ++ +.++. ..-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~--~~v~an~~-~~-----~~~G~------------~~g 141 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA--TNVFANRL-KF-----YFNGE------------YAG 141 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG--GGEEEECE-EE-----CTTSC------------EEE
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcc--cceeeeee-ee-----eehhc------------ccc
Confidence 478999999999999999999999999999999999999942 11111000 00 00000 000
Q ss_pred EE----ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccC-ccHHHHhccCeeeccCChhHH
Q psy10301 719 LA----RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT-GTDVAKEASDIILTDDNFSSI 792 (1119)
Q Consensus 719 ~a----r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~-g~~~ak~aaDiil~d~~f~~i 792 (1119)
+- ...+..|..+++.+++. + ..+.++++|||.||.+|++.||++||+|.+ .....++.+|+++. +|..+
T Consensus 142 ~~~~~p~~~~~~K~~~v~~~~~~-~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 142 FDETQPTAESGGKGKVIKLLKEK-F--HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp ECTTSGGGSTTHHHHHHHHHHHH-H--CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred ceeeeeeeccchHHHHHHHHHhc-c--CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHHh
Confidence 00 13467799999988653 2 335689999999999999999999999833 34567788999986 56543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=1.2e-08 Score=106.31 Aligned_cols=143 Identities=13% Similarity=0.087 Sum_probs=101.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEE----EecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI----LEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~----l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+.. .+.+ .++..... .....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~---~~~an~~~~~~~~~~~--------------~~~~~ 137 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNHASFDNDYIHI--------------DWPHS 137 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG---GEEEEEEECSSSBCEE--------------ECTTC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc---ceeeeeEEEeCCccee--------------ccccc
Confidence 578999999999999999999999999999999999998742 2211 11110000 00000
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHH-HhccCeeeccCChhHHH
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA-KEASDIILTDDNFSSIV 793 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~a-k~aaDiil~d~~f~~i~ 793 (1119)
.....+...|..|..+++.+ +..++.|+++||+.||.+|++.||++||++ ...+.+ ++..++.. -++|+.|.
T Consensus 138 ~~~~~~~~k~~~~~~~~~~~-----~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~ 210 (226)
T d2feaa1 138 CKGTCSNQCGCCKPSVIHEL-----SEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIR 210 (226)
T ss_dssp CCTTCCSCCSSCHHHHHHHH-----CCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHH
T ss_pred cccccccCCHHHHHHHHHHh-----cCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHH
Confidence 11123456788898888875 778889999999999999999999999998 444444 44444443 45899998
Q ss_pred HHHHHHHHHHHH
Q psy10301 794 KAVMWGRNVYDS 805 (1119)
Q Consensus 794 ~~i~~GR~~~~~ 805 (1119)
..+++-....+-
T Consensus 211 ~~l~~~~~~~~~ 222 (226)
T d2feaa1 211 KEIENVKEVQEW 222 (226)
T ss_dssp HHHHTSHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 887754444443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.65 E-value=3.3e-08 Score=100.63 Aligned_cols=131 Identities=13% Similarity=0.122 Sum_probs=91.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
+..++....++.+ +.+.++..+|+.........+...++.....+.+..... .....
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~ 125 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS----------------------DRVVG 125 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT----------------------SCEEE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc----------------------ccccc
Confidence 3455666666655 578999999999999999999999884321111111000 11122
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i~~ 798 (1119)
.....+..+...++.+ +...+.|+++|||.||.+||+.||+||||+ +..++.++++|++.. +++..++++|..
T Consensus 126 ~~~~~~~~~~~~~~~~-----~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 126 YQLRQKDPKRQSVIAF-----KSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp EECCSSSHHHHHHHHH-----HHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHh-----cccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 3334455555555543 446688999999999999999999999996 777788889999876 478888887764
Q ss_pred H
Q psy10301 799 G 799 (1119)
Q Consensus 799 G 799 (1119)
-
T Consensus 199 ~ 199 (206)
T d1rkua_ 199 A 199 (206)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.62 E-value=4.4e-08 Score=102.63 Aligned_cols=57 Identities=25% Similarity=0.223 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCee
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 783 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDii 783 (1119)
.|...++.+.++......+.++++|||.||.+||+.||.||||| |+++.+++.+|.+
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i 235 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI 235 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCH
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeC-CCChHHHhhhhHH
Confidence 68877777766532344567889999999999999999999999 8887776655443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.58 E-value=1.6e-08 Score=103.26 Aligned_cols=134 Identities=21% Similarity=0.214 Sum_probs=96.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++.+++.+.++.++..|..+.++||.....+....++.++...-...+ ...+.. ...
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------------------~~~ 131 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRL--IVKDGK--------------------LTG 131 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE--EEETTE--------------------EEE
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhh--cccccc--------------------ccc
Confidence 4788899999999999999999999999999999999988742110000 000000 000
Q ss_pred EEE--ecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 718 VLA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 718 v~a--r~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
... -..+..|...++.+.+. ++...+.++++|||.||.+|++.||+|||| ++.+..++.||+++..+++..|.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~ 208 (210)
T d1j97a_ 132 DVEGEVLKENAKGEILEKIAKI-EGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKY 208 (210)
T ss_dssp EEECSSCSTTHHHHHHHHHHHH-HTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred cccccccccccccchhhhHHHH-hcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 011 11233455555555443 355666788899999999999999999999 5889999999999998888888765
Q ss_pred H
Q psy10301 796 V 796 (1119)
Q Consensus 796 i 796 (1119)
|
T Consensus 209 l 209 (210)
T d1j97a_ 209 I 209 (210)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.58 E-value=1.2e-07 Score=99.70 Aligned_cols=153 Identities=16% Similarity=0.203 Sum_probs=99.1
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHh----------HHHHhhcC-c----------
Q psy10301 643 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE----------FNRRVRDN-N---------- 701 (1119)
Q Consensus 643 ~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~----------~~~~~~~~-~---------- 701 (1119)
+..+++.++++.|+.+.++||++...+..+.++.++..++ .++.-+|.. +...+... .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~-~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPD-YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCS-EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCc-eEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 3445666778899999999999999999999999986442 222222211 00100000 0
Q ss_pred --------------------------hhhh---HHHHhhhcCceE--------EEEecChhhHHHHHHHHHHhhcCCCCC
Q psy10301 702 --------------------------GEVQ---QNLLDKVWPRLR--------VLARSSPSDKYTLVKGMIDSKISAGRE 744 (1119)
Q Consensus 702 --------------------------~~~~---~~~~~~i~~~~~--------v~ar~sP~~K~~iV~~l~~~~~~~~~~ 744 (1119)
.... .+.+........ +-.-....+|...++.+.+. ++...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~-~gi~~~ 179 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQH-LAMEPS 179 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHH-TTCCGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHh-ccCChh
Confidence 0000 011111111111 11112345799999998776 355556
Q ss_pred EEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccC-------eeeccCChhHHHHHHHH
Q psy10301 745 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD-------IILTDDNFSSIVKAVMW 798 (1119)
Q Consensus 745 ~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaD-------iil~d~~f~~i~~~i~~ 798 (1119)
.|+++|||.||.+||+.|+.|++|| ++.+.+|+.|| ++...++..+|.++|++
T Consensus 180 ~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 180 QTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp GEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred hEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 6888999999999999999999999 89999998888 45555567788877764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=1.9e-06 Score=88.81 Aligned_cols=41 Identities=5% Similarity=0.072 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 679 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~ 679 (1119)
.+.+.+.+++++|+++|+.++++||++...+..+.+++|+-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46678999999999999999999999999999999999973
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.97 E-value=2.9e-06 Score=87.69 Aligned_cols=55 Identities=18% Similarity=0.297 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcCC-ceEEEccCccHHHHhccCeeec
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDIILT 785 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~Ad-VGiamg~~g~~~ak~aaDiil~ 785 (1119)
+|...++.|. +...+.|+++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++.
T Consensus 185 sKg~al~~L~----~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLD----QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHT----TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHh----cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 7999999884 446778999999 569999999997 699999 999999999998863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.68 E-value=1.1e-05 Score=82.61 Aligned_cols=60 Identities=13% Similarity=0.322 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCeeeccCChhHHHHHH
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDiil~d~~f~~i~~~i 796 (1119)
+|...++.+.+ ...++++||+.||.+||+.|+-|+||+ .|. ++.+|++.+. +...+...+
T Consensus 159 ~Kg~al~~l~~------~~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~--~~~ev~~~l 218 (229)
T d1u02a_ 159 NKGSAIRSVRG------ERPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVA--DYIEMRKIL 218 (229)
T ss_dssp CHHHHHHHHHT------TSCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEES--SHHHHHHHH
T ss_pred CHHHHHHHHhc------cccceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcC--CHHHHHHHH
Confidence 79999998853 245778899999999999997776665 332 2567889987 344444443
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.00068 Score=72.09 Aligned_cols=141 Identities=12% Similarity=0.126 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++|||+++.++.|++.|+.+.++||--...+..++++.|+..++-.+++ +.-+++.- + +..-+.. .+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~s-N~l~f~~~-----~------~~~~~~~-~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDFDEN-----G------VLKGFKG-EL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEE-ECEEECTT-----S------BEEEECS-SC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEe-eEEEEeCC-----e------eEeeccC-Cc
Confidence 5899999999999999999999999999999999999998543322221 11111100 0 0000000 00
Q ss_pred EEecChhhHHHHHHHH-HHhhcCCCCCEEEEEcCCcCCHHhhhc---CCceEEEcc-Ccc-----HHHHhccCeeeccCC
Q psy10301 719 LARSSPSDKYTLVKGM-IDSKISAGREVVAVTGDGTNDGPALKK---ADVGFAMGI-TGT-----DVAKEASDIILTDDN 788 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l-~~~~~~~~~~~V~~iGDG~ND~~aLk~---AdVGiamg~-~g~-----~~ak~aaDiil~d~~ 788 (1119)
.....|...+... ...........|.++|||.||.+|.+. ++.+++.|- +.. +.-.++-|||+.+|.
T Consensus 202 ---i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~ 278 (291)
T d2bdua1 202 ---IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEE 278 (291)
T ss_dssp ---CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCC
T ss_pred ---cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCC
Confidence 1122343322111 111124456778899999999999874 455555553 111 123468899988776
Q ss_pred hhHHHHH
Q psy10301 789 FSSIVKA 795 (1119)
Q Consensus 789 f~~i~~~ 795 (1119)
--.++..
T Consensus 279 ~~~v~~~ 285 (291)
T d2bdua1 279 SLEVVNS 285 (291)
T ss_dssp BCHHHHH
T ss_pred ChhHHHH
Confidence 5444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.06 E-value=0.00036 Score=71.33 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aG-I~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++-||+.+.+++|++.| +++.++|+.....+..+.+..|+...-+. + ..+.+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~-i-~~~~~~------------------------ 144 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF-G-AFADDA------------------------ 144 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC-E-ECTTTC------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc-c-cccccc------------------------
Confidence 34689999999999987 89999999999999999999999532111 1 111110
Q ss_pred EEEecChhhHHH-HHHHHHHh-hcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHH-HHhccCeeeccCChhH
Q psy10301 718 VLARSSPSDKYT-LVKGMIDS-KISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDV-AKEASDIILTDDNFSS 791 (1119)
Q Consensus 718 v~ar~sP~~K~~-iV~~l~~~-~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~-ak~aaDiil~d~~f~~ 791 (1119)
..+..+.. ..+.+++. ..+...+.++|+||+.+|..|-+.|++ +++.|....+. .+..+|+++. +++.
T Consensus 145 ----~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~e 218 (228)
T d2hcfa1 145 ----LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAE 218 (228)
T ss_dssp ----SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCC
T ss_pred ----ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHH
Confidence 01111111 12222111 113345678999999999999999994 44445333332 4446899987 7888
Q ss_pred HHHHHH
Q psy10301 792 IVKAVM 797 (1119)
Q Consensus 792 i~~~i~ 797 (1119)
+.++|.
T Consensus 219 l~~~l~ 224 (228)
T d2hcfa1 219 TDEVLA 224 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.00054 Score=70.01 Aligned_cols=50 Identities=18% Similarity=0.366 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CcCCHHhhhcCC-ceEEEccCccHHHHhccC
Q psy10301 726 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASD 781 (1119)
Q Consensus 726 ~K~~iV~~l~~~~~~~~~~~V~~iGD----G~ND~~aLk~Ad-VGiamg~~g~~~ak~aaD 781 (1119)
+|...++.+. +...+.|+++|| |.||.+||+.|+ .|++++ +. +..++.++
T Consensus 185 sKg~al~~l~----~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~-~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVE----NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-AP-EDTRRICE 239 (243)
T ss_dssp SGGGGGGGTT----TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SH-HHHHHHHH
T ss_pred CHHHHHHHHh----CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CH-HHHHHHHH
Confidence 7888888763 456688999999 779999999997 688776 44 44444443
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.75 E-value=0.0011 Score=66.62 Aligned_cols=121 Identities=12% Similarity=0.134 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.+++.+.++.++..| ++.++|+.....+..+.+..|+...-+. .+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~--------------------------------v~ 130 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------IY 130 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc--------------------------------cc
Confidence 46789999999999875 8899999999999999999998432111 12
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc---eEEEccCccHH-HHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDV-AKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV---Giamg~~g~~~-ak~aaDiil~d~~f~~i~~ 794 (1119)
.+...+..|..+.....+. ++-..+.++|+||+.||..|-+.|++ ++.-|....+. ....+|+++. ++..+.+
T Consensus 131 ~~~~~~~~~p~~~~~~~~~-~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~ 207 (210)
T d2ah5a1 131 GSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp EECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred cccccccccccccchhhhh-hhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 2233344444555554443 46677789999999999999999997 34334223333 3345899987 6777665
Q ss_pred H
Q psy10301 795 A 795 (1119)
Q Consensus 795 ~ 795 (1119)
.
T Consensus 208 ~ 208 (210)
T d2ah5a1 208 Y 208 (210)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.74 E-value=0.00097 Score=67.34 Aligned_cols=119 Identities=14% Similarity=0.224 Sum_probs=78.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..--+. ++.+.+..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~~~~------------------------ 141 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAEKLP------------------------ 141 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECTTSS------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--cccccccc------------------------
Confidence 4579999999999999999999999999999999999999421111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCcc----HHHHhccCeeeccCChhH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT----DVAKEASDIILTDDNFSS 791 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~----~~ak~aaDiil~d~~f~~ 791 (1119)
+..|+ ..+.+...+. ++-..+.++++||+.+|..|-+.|++.. ++..+. +.....||+++. +|..
T Consensus 142 --~~Kp~--~~~~~~~~~~-l~~~~~~~l~igD~~~di~aA~~~G~~~-i~v~~~~~~~~~~~~~a~~~i~--~l~e 210 (218)
T d1te2a_ 142 --YSKPH--PQVYLDCAAK-LGVDPLTCVALEDSVNGMIASKAARMRS-IVVPAPEAQNDPRFVLANVKLS--SLTE 210 (218)
T ss_dssp --CCTTS--THHHHHHHHH-HTSCGGGEEEEESSHHHHHHHHHTTCEE-EECCCTTTTTCGGGGGSSEECS--CGGG
T ss_pred --cchhh--HHHHHHHHHH-cCCCchhcEEEeeCHHHHHHHHHcCCEE-EEECCCCCccchhhcCCCEEEC--Chhh
Confidence 11122 1222222222 3556778999999999999999999754 332222 223346788877 5554
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.70 E-value=0.0004 Score=70.41 Aligned_cols=125 Identities=22% Similarity=0.310 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++++.++.|++.|+++.++|+.....+..+.+++||...-+.. +.+.+..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~--~~~~~~~------------------------ 148 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM--LGGQSLP------------------------ 148 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--ECTTTSS------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccc--ccccccc------------------------
Confidence 35899999999999999999999999999999999999984221111 1111000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc-eEEE--ccCc-cHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAM--GITG-TDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV-Giam--g~~g-~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
.....|+--..+.+. ++...+.++|+||+.+|..+-+.|++ .|.+ |.+. .+.....+|+++. ++..+.+
T Consensus 149 ~~kp~p~~~~~~~~~-----~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ 221 (224)
T d2hsza1 149 EIKPHPAPFYYLCGK-----FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 221 (224)
T ss_dssp SCTTSSHHHHHHHHH-----HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred cccccchhhHHHHHH-----hhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHH
Confidence 001122322222222 36677889999999999999999986 3333 2111 2344556899887 6777665
Q ss_pred HH
Q psy10301 795 AV 796 (1119)
Q Consensus 795 ~i 796 (1119)
+|
T Consensus 222 ii 223 (224)
T d2hsza1 222 IT 223 (224)
T ss_dssp GT
T ss_pred hh
Confidence 43
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.38 E-value=0.0023 Score=66.30 Aligned_cols=96 Identities=18% Similarity=0.189 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++||.+...+..+.+..|+..--.+. ++.+.+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~-~~~~d~~~------------------------ 153 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDVP------------------------ 153 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGSS------------------------
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccc-cccccccc------------------------
Confidence 57899999999999999999999999999999999999984321111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCCEEEEEcCCcCCHHhhhcCCc
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~-~~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
..+-.|+.=....+.+ +. +.+.++|+||+.+|+.+=+.|++
T Consensus 154 ~~KP~p~~~~~~~~~l-----~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 154 AGRPYPWMCYKNAMEL-----GVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp CCTTSSHHHHHHHHHH-----TCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred ccccChHHHHHHHHHh-----CCCCcceEEEEeCChhhHHHHHHCCC
Confidence 0011233223333332 43 45779999999999999999996
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.14 E-value=0.011 Score=59.81 Aligned_cols=124 Identities=17% Similarity=0.178 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-+. ++.+.+..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~~s~~~~------------------------ 152 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS--ITTSEEAG------------------------ 152 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEHHHHT------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc--cccccccc------------------------
Confidence 56899999999997 5899999999999999999999998422111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCC-cCCHHhhhcCCceEEEcc---CccHHHHhccCeeeccCChhHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAMGI---TGTDVAKEASDIILTDDNFSSIVK 794 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG-~ND~~aLk~AdVGiamg~---~g~~~ak~aaDiil~d~~f~~i~~ 794 (1119)
...|+ ..+.+...+. ++.....++++||. .+|+.+-+.|++-.. +. .........+|+++. +++.+.+
T Consensus 153 --~~KP~--~~~~~~~~~~-l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v-~v~~~~~~~~~~~~~d~~i~--~l~el~~ 224 (230)
T d1x42a1 153 --FFKPH--PRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSI-LLDRKGEKREFWDKCDFIVS--DLREVIK 224 (230)
T ss_dssp --BCTTS--HHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEE-EECTTSCCGGGGGGSSEEES--STTHHHH
T ss_pred --ccchh--hHHHHHHHhh-hcccccccceeecCcHhHHHHHHHcCCEEE-EECCCCCCcccccCCCEEEC--CHHHHHH
Confidence 01122 1233333222 35555679999998 589999888987532 22 122334567899988 7898888
Q ss_pred HHH
Q psy10301 795 AVM 797 (1119)
Q Consensus 795 ~i~ 797 (1119)
+|+
T Consensus 225 ~l~ 227 (230)
T d1x42a1 225 IVD 227 (230)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.81 E-value=0.012 Score=57.51 Aligned_cols=56 Identities=25% Similarity=0.289 Sum_probs=41.8
Q ss_pred CCCCCEEEEEcCCcCCHHhhhcCCceE--EE--ccCccHHHHhccCeeeccCChhHHHHHHH
Q psy10301 740 SAGREVVAVTGDGTNDGPALKKADVGF--AM--GITGTDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 740 ~~~~~~V~~iGDG~ND~~aLk~AdVGi--am--g~~g~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
+...+.+.||||..+|..|=+.|+++- .+ |....+.....||+++. ++..+++.|+
T Consensus 122 ~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ik 181 (182)
T d2gmwa1 122 HIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 181 (182)
T ss_dssp TBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred ccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHHhc
Confidence 555667899999999999999999853 33 21123455667999988 7888888775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.011 Score=60.06 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+.|++.+++++|++.|+++.++|+............+|+..-.+...... .+.
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~------------------------- 180 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF-DTK------------------------- 180 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEE-CGG-------------------------
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceee-ccc-------------------------
Confidence 468999999999999999999999999999999999999742111111000 000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEE----ccCccHHHHhccCeeec
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILT 785 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiam----g~~g~~~ak~aaDiil~ 785 (1119)
.+..|+-. +.....++ ++-..+.++|+||..+|+.+=++|++-..+ |..........++.++.
T Consensus 181 -~~~KP~p~--~~~~~~~~-~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 181 -IGHKVESE--SYRKIADS-IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp -GCCTTCHH--HHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred -cccCCCcH--HHHHHHHH-hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 01123221 22222221 355567899999999999999999986554 32223334455666665
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.42 E-value=0.011 Score=56.88 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=63.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~-~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++..... .
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~---------------------------------~ 92 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI---------------------------------Q 92 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS---------------------------------E
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce---------------------------------e
Confidence 578999999999999999999999755 455666666666631100 1
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceE
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 766 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGi 766 (1119)
+.+...|. ....+.+.+. ++...+.++++||..+|+.+-++|++-.
T Consensus 93 ~~~~~kp~--~~~~~~~~~~-~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 93 REIYPGSK--VTHFERLHHK-TGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp EEESSSCH--HHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred eecccCCC--hHHHHHHHHH-hCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 22222333 2333333332 4667788999999999999999998744
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.05 E-value=0.0049 Score=58.08 Aligned_cols=101 Identities=20% Similarity=0.141 Sum_probs=60.1
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCce
Q psy10301 637 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 716 (1119)
Q Consensus 637 eDplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 716 (1119)
+|++.|++.+.++.++++|++++++||.+......+.+.++.. +..+ ..+... ...
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------~~~~-------------~~~~~~-~~~ 89 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------RKWV-------------EDIAGV-PLV 89 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------HHHH-------------HHTTCC-CCS
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------hhhh-------------hhcCCC-cEE
Confidence 5789999999999999999999999998753221111111100 0000 000000 011
Q ss_pred EEEEe------cChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 717 RVLAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 717 ~v~ar------~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
..+.+ ..+.-|..+.+.+ .....++++|+||...|+.|.+++++-
T Consensus 90 ~~~~~~~~~~~~d~~~k~~~l~~~----~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 90 MQCQREQGDTRKDDVVKEEIFWKH----IAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp EEEECCTTCCSCHHHHHHHHHHHH----TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred EeecccccccCCchHHHHHHHHHh----ccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 12221 1233455555544 234567789999999999999999875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.77 E-value=0.021 Score=56.38 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=72.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+..- -+. ++.+.+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-f~~-i~~s~~~------------------------- 133 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-FTE-ILTSQSG------------------------- 133 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-EEE-EECGGGC-------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-ccc-ccccccc-------------------------
Confidence 3679999999999999999999998654 55678888998421 010 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE-EccCccHHHHhccCeeeccCChhHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia-mg~~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
.+..| +..+.+.+.+. ++...+.++|+||+.+|..+-+.|++... +. .+.. .+|..+. ++..+.++
T Consensus 134 -~~~Kp--~~~~~~~~~~~-~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l 200 (204)
T d2go7a1 134 -FVRKP--SPEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRI 200 (204)
T ss_dssp -CCCTT--SSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHH
T ss_pred -cccch--hHHHHHHHHHH-hCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecC--CHHHHHHH
Confidence 01112 22233333322 35566789999999999999999998643 33 3321 2444444 45555544
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.71 E-value=0.035 Score=56.41 Aligned_cols=125 Identities=11% Similarity=0.135 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.++++.|++ |+++.++|+..........+.+|+...-+.+ +.+.+..
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~~------------------------ 161 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAI--VIGGEQK------------------------ 161 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEE--EEGGGSS------------------------
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccccc--ccccccc------------------------
Confidence 367999999999985 8999999999999999999999985332211 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-CCHHhhhcCCceEEEccCcc----HHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGT----DVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~-ND~~aLk~AdVGiamg~~g~----~~ak~aaDiil~d~~f~~i~ 793 (1119)
...|. ..+.+.+.+. ++...+.++|+||.. +|+.+-+.|++.-....++. ......+|+++. ++..+.
T Consensus 162 --~~KP~--p~~~~~~~~~-~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~ 234 (247)
T d2gfha1 162 --EEKPA--PSIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELP 234 (247)
T ss_dssp --SCTTC--HHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHH
T ss_pred --cchhh--hhhHHHHHHH-hhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHH
Confidence 01122 1222222222 244556688999996 89999999998633222221 122345788888 688887
Q ss_pred HHHH
Q psy10301 794 KAVM 797 (1119)
Q Consensus 794 ~~i~ 797 (1119)
++|+
T Consensus 235 ~ll~ 238 (247)
T d2gfha1 235 ALLQ 238 (247)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.49 E-value=0.0074 Score=60.08 Aligned_cols=121 Identities=12% Similarity=0.191 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.|++.+.++.|++ ++++.++|+.....+..+.++.|+...-+ .+..+.+..
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~------------------------ 134 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTP------------------------ 134 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSS------------------------
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccccc--ccccccccc------------------------
Confidence 356899999999974 79999999999999999999999842110 111111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc--CccHHHHhccCeeeccCChhHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI--TGTDVAKEASDIILTDDNFSSIV 793 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~--~g~~~ak~aaDiil~d~~f~~i~ 793 (1119)
...-.|+--..+++. ++...+.++|+||+.+|..+-++|++...+-. ..+....+.+|+++. ++..|.
T Consensus 135 ~~KP~p~~~~~~~~~-----~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 135 KRKPDPLPLLTALEK-----VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp CCTTSSHHHHHHHHH-----TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES--SGGGGG
T ss_pred cchhhhhhhcccccc-----eeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC--CHHHHH
Confidence 001122222333332 35555678899999999999999998765421 233344567788875 565554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.65 E-value=0.042 Score=53.49 Aligned_cols=109 Identities=16% Similarity=0.083 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
++.||+++.++.+++.|+++.++|+-+... ..+.+..|+... -+ .++.+.+.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~-fd-~i~~~~~~------------------------- 130 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAY-FT-EVVTSSSG------------------------- 130 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGG-EE-EEECGGGC-------------------------
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccc-cc-cccccccc-------------------------
Confidence 467999999999999999999999976655 456788887421 00 01111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEccCccHHHHhccCe
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 782 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~~g~~~ak~aaDi 782 (1119)
. ...|. ..+.+...+. ++. +.++++||..+|..+-++|++-... .++.+..++.-|+
T Consensus 131 ~-~~KP~--p~~~~~~~~~-~~~--~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 131 F-KRKPN--PESMLYLREK-YQI--SSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp C-CCTTS--CHHHHHHHHH-TTC--SSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred c-ccCCC--HHHHHHHHHH-cCC--CCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 0 01111 1122222222 232 3488999999999999999987543 4666777766654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.29 E-value=0.068 Score=54.72 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=30.4
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy10301 642 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC 676 (1119)
Q Consensus 642 ~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~ 676 (1119)
|++.++|++|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999998877777776654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.02 E-value=0.12 Score=51.43 Aligned_cols=147 Identities=20% Similarity=0.313 Sum_probs=94.7
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHH---------H-------HhhcCchh
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN---------R-------RVRDNNGE 703 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~---------~-------~~~~~~~~ 703 (1119)
+-||+.++++.+++. ....++|---..-+.++|+.+|+ |.+ ..+ +--+++ + .+.+...+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gf--p~e-~~~-T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGV--RGE-LHG-TEVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTC--CSE-EEE-EBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCC--Cce-eec-ccccccccCCChHHHHHHHHHhhhccCccHH
Confidence 458999999999887 67777777777788999999999 322 111 111111 0 01111111
Q ss_pred hhHHHHhh---------hcCceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc--eEEEccCc
Q psy10301 704 VQQNLLDK---------VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV--GFAMGITG 772 (1119)
Q Consensus 704 ~~~~~~~~---------i~~~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV--Giamg~~g 772 (1119)
-..+.+++ ++..++.. --..|..+++...... .. ...+++||+..|..||+.|.= |+|+.-||
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~-~~--~~~~~VGDSITDve~Lr~~r~~gGlaIsFNG 230 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESK-GI--DFPVVVGDSISDYKMFEAARGLGGVAIAFNG 230 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHH-TC--SSCEEEECSGGGHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccc-cC--CcceeccCccccHHHHHHHhcCCCeeEEecC
Confidence 11122222 22222222 2256888887776542 22 234899999999999998842 77777799
Q ss_pred cHHHHhccCeeeccCChhHHHHHHH
Q psy10301 773 TDVAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 773 ~~~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
.+-|-..||+.+.+.+-..+..++.
T Consensus 231 N~Yal~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 231 NEYALKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CHHHHTTCSEEEECSSTHHHHHHHH
T ss_pred ccccccccceEEeccchhHHHHHHH
Confidence 9999999999999888877777665
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.43 E-value=0.24 Score=50.46 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=39.4
Q ss_pred cCCCCCEEEEEcCCc-CCHHhhhcCCc-eEEEc--cCccHHHHh---ccCeeeccCChhHHHHHH
Q psy10301 739 ISAGREVVAVTGDGT-NDGPALKKADV-GFAMG--ITGTDVAKE---ASDIILTDDNFSSIVKAV 796 (1119)
Q Consensus 739 ~~~~~~~V~~iGDG~-ND~~aLk~AdV-Giamg--~~g~~~ak~---aaDiil~d~~f~~i~~~i 796 (1119)
++-..+.++|+||.. +|+.+-+.|++ ++.+. ....+.... .+|+++. ++..+.++|
T Consensus 198 l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 198 FGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred hccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 356678899999996 69999999996 45443 222222222 3599998 788888776
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.39 E-value=0.05 Score=53.87 Aligned_cols=87 Identities=20% Similarity=0.278 Sum_probs=61.2
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCc
Q psy10301 640 VRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 715 (1119)
Q Consensus 640 lr~~v~~aI~~l~~aGI~v~m~TGD~~----~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~ 715 (1119)
+.|++.+.++.+++.|++|+.+||+.. .|+..+.+.+|+-..+...+.+.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------- 143 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------- 143 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-----------------------
Confidence 457999999999999999999999863 46677777789843322212211111
Q ss_pred eEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc
Q psy10301 716 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 716 ~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
.....|...|+. ..+++++||..+|..+-++|++
T Consensus 144 ------~~K~~rr~~Ik~---------y~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 144 ------PGQNTKSQWLQD---------KNIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp ------TTCCCSHHHHHH---------TTEEEEEESSHHHHHHHHHTTC
T ss_pred ------CCchHHHHHHHH---------cCeEEEecCCHHHHhHHHHcCC
Confidence 122345555543 3689999999999999888885
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=90.70 E-value=0.15 Score=50.23 Aligned_cols=124 Identities=10% Similarity=0.175 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+.+++.++++.+++.|+++.++|+-.......+.+..|+...-+.++ .+.+..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~--~s~~~~------------------------ 146 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLL--SVDPVQ------------------------ 146 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--ESGGGT------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccccee--eeeeee------------------------
Confidence 457899999999999999999999999999999998888854322221 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEEEcc---CccHHHHhccCeeeccCChhHHHHH
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI---TGTDVAKEASDIILTDDNFSSIVKA 795 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGiamg~---~g~~~ak~aaDiil~d~~f~~i~~~ 795 (1119)
...|+ ..+.+...+. ++-..+.++++||..+|+-+=++|++--..-. ...+.....+|+++. ++..+.++
T Consensus 147 --~~KP~--p~~~~~~~~~-~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~l 219 (220)
T d1zrna_ 147 --VYKPD--NRVYELAEQA-LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 219 (220)
T ss_dssp --CCTTS--HHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred --ccccH--HHHHHHHHHH-hCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHhh
Confidence 01122 1112222221 25556779999999999999999997754321 122223445799886 67777643
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=88.65 E-value=0.16 Score=51.76 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=30.2
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCcCC
Q psy10301 642 PEVPEAIKKCQRAGITIRMVTGDN---INTARSIATKCGIVKP 681 (1119)
Q Consensus 642 ~~v~~aI~~l~~aGI~v~m~TGD~---~~ta~~ia~~~Gi~~~ 681 (1119)
|++.++|+.|+++|++++.+|+.. .......-+++|+-.+
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 689999999999999999998544 4444444556787433
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=87.27 E-value=0.56 Score=46.32 Aligned_cols=25 Identities=40% Similarity=0.626 Sum_probs=23.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTG 663 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TG 663 (1119)
.+-|++.+++++|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3679999999999999999999995
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.71 E-value=0.32 Score=47.91 Aligned_cols=125 Identities=11% Similarity=0.207 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceEE
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 718 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 718 (1119)
.+.|++.+.+++++. +..++|+-....+..+.+.+|+...-+..+ ..+.+...
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-~~~~~~~~----------------------- 137 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHI-YSAKDLGA----------------------- 137 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCE-EEHHHHCT-----------------------
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceee-cccccccc-----------------------
Confidence 467888888877754 557899999999999999999954322211 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce-EEEccCcc-------H-HHHhccCeeeccCCh
Q psy10301 719 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT-------D-VAKEASDIILTDDNF 789 (1119)
Q Consensus 719 ~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG-iamg~~g~-------~-~ak~aaDiil~d~~f 789 (1119)
.+..|+-. -+.+.+.+ ++...+.++++||+.+|+.+=+.|++- |++. .+. + ....-+|+++. ++
T Consensus 138 -~~~KP~~~-~~~~~~~~--l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l 210 (222)
T d2fdra1 138 -DRVKPKPD-IFLHGAAQ--FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RM 210 (222)
T ss_dssp -TCCTTSSH-HHHHHHHH--HTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CG
T ss_pred -cccccCHH-HHHHHHHh--hCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CH
Confidence 01223221 11222222 356677899999999999999999963 2222 221 1 12234899998 67
Q ss_pred hHHHHHHH
Q psy10301 790 SSIVKAVM 797 (1119)
Q Consensus 790 ~~i~~~i~ 797 (1119)
..+..++.
T Consensus 211 ~eL~~ll~ 218 (222)
T d2fdra1 211 QDLPAVIA 218 (222)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 77765553
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=85.83 E-value=0.16 Score=50.23 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++-|++.+.++.|++.|+++.++|+... +....+..|+...-+. ++.+.+.
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~--i~~~~~~------------------------ 141 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA--IADPAEV------------------------ 141 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE--ECCTTTS------------------------
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc--ccccccc------------------------
Confidence 35678999999999999999999999754 5677788888532111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCc
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 764 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdV 764 (1119)
....|+- .+.+...+. ++...+.++|+||..+|+.+-+.|++
T Consensus 142 --~~~KP~~--~~~~~~l~~-~~i~~~~~l~VgD~~~di~~A~~aG~ 183 (221)
T d1o08a_ 142 --AASKPAP--DIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGA 183 (221)
T ss_dssp --SSCTTST--HHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred --cccccCh--HHHHHHHHH-cCCCCceEEEEecCHHHHHHHHHcCC
Confidence 0112322 122222222 35566778999999999999999987
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=85.10 E-value=1.6 Score=43.80 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=27.9
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy10301 641 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 675 (1119)
Q Consensus 641 r~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~ 675 (1119)
=|++.++++.|+++|++++++|+....+...+++.
T Consensus 20 i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~ 54 (253)
T d1wvia_ 20 IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM 54 (253)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 38899999999999999999998655555555544
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=82.80 E-value=1.7 Score=42.77 Aligned_cols=125 Identities=9% Similarity=0.121 Sum_probs=78.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcCceE
Q psy10301 638 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 717 (1119)
Q Consensus 638 Dplr~~v~~aI~~l~~aGI~v~m~TGD~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 717 (1119)
.++-+++.+++++++ |+.+.++|..+...+..+-+..|+...-+. ++.+.+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~--v~~s~~~~----------------------- 144 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VISVDAKR----------------------- 144 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT-----------------------
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccc--cccccccc-----------------------
Confidence 356788999999885 788999999999999998889988533222 22222211
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCceEE-EccCccH----------------------
Q psy10301 718 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITGTD---------------------- 774 (1119)
Q Consensus 718 v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVGia-mg~~g~~---------------------- 774 (1119)
+..|+- .+.+...+. ++...+.++++||..+|+.+=+.|++--. +...+.+
T Consensus 145 ---~~KP~p--~~f~~a~~~-lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (245)
T d1qq5a_ 145 ---VFKPHP--DSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRM 218 (245)
T ss_dssp ---CCTTSH--HHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHS
T ss_pred ---ccCccH--HHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhh
Confidence 112331 122222221 35556678999999999999899886422 2101110
Q ss_pred ---HHHhccCeeeccCChhHHHHHHH
Q psy10301 775 ---VAKEASDIILTDDNFSSIVKAVM 797 (1119)
Q Consensus 775 ---~ak~aaDiil~d~~f~~i~~~i~ 797 (1119)
......|+++. ++..+..+|+
T Consensus 219 ~~~~~~~~pd~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 219 REETYAEAPDFVVP--ALGDLPRLVR 242 (245)
T ss_dssp SCCTTSCCCSEEES--SGGGHHHHHH
T ss_pred hhhhccCCCCEEEC--CHHHHHHHHH
Confidence 01124789987 8888888775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.98 E-value=0.77 Score=44.70 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=58.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCcCCCCceEEEecHhHHHHhhcCchhhhHHHHhhhcC
Q psy10301 639 PVRPEVPEAIKKCQRAGITIRMVTGD----NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 714 (1119)
Q Consensus 639 plr~~v~~aI~~l~~aGI~v~m~TGD----~~~ta~~ia~~~Gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~~~~i~~ 714 (1119)
.++|++.+.+++|+++|+++.++|+- ............|+..--+. ++.+.+..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~--i~~s~~~~-------------------- 154 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDF--LIESCQVG-------------------- 154 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSE--EEEHHHHS--------------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhce--eeehhhcc--------------------
Confidence 36799999999999999999999963 33344455556665321111 11111110
Q ss_pred ceEEEEecChhhHHHHHHHHHHhhcCCCCCEEEEEcCCcCCHHhhhcCCce
Q psy10301 715 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 765 (1119)
Q Consensus 715 ~~~v~ar~sP~~K~~iV~~l~~~~~~~~~~~V~~iGDG~ND~~aLk~AdVG 765 (1119)
...-.|+--....+.+ +-..+.++|+||..+|+.+-+.|++-
T Consensus 155 ----~~KP~p~~~~~~~~~~-----~v~p~~~l~IgD~~~Di~~A~~aG~~ 196 (222)
T d1cr6a1 155 ----MIKPEPQIYNFLLDTL-----KAKPNEVVFLDDFGSNLKPARDMGMV 196 (222)
T ss_dssp ----CCTTCHHHHHHHHHHH-----TSCTTSEEEEESSSTTTHHHHHHTCE
T ss_pred ----CCCCChHHHHHHHHHh-----CCCcceEEEEECCHHHHHHHHHcCCE
Confidence 0011233333333332 44556688899999999999999974
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=80.91 E-value=2.7 Score=37.91 Aligned_cols=106 Identities=17% Similarity=0.221 Sum_probs=65.0
Q ss_pred cChhHHHHHHHHHHcCCChhhhhhcCCccceeeeecCCCCcceEEEEEecCCeeEEEEeCccHHHHhhcccccccCCeee
Q psy10301 488 GNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLE 567 (1119)
Q Consensus 488 g~~~E~ALl~~~~~~g~~~~~~~~~~~~~~i~~~~~F~s~rk~msvvv~~~~~~~l~~KGA~e~il~~c~~~~~~~~~~~ 567 (1119)
.+|...|++.+|++.+..... .....-....+|....+...+.+ +|. .+..|++..+.+.+.. .+.
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~--~g~--~v~~G~~~~~~~~~~~----~g~-- 95 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRER----DVQSLHATFVPFTAQSRMSGINI--DNR--MIRKGSVDAIRRHVEA----NGG-- 95 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCC----CTTTTTCEEEEEETTTTEEEEEE--TTE--EEEEECHHHHHHHHHH----HTC--
T ss_pred CchHHHHHHHHHHHhcCCCcc----ccccccccccccccccceEEEEE--CCE--EEEecHHHHHHHHHHH----cCC--
Confidence 368899999999875422111 01111124456666665444433 333 4557998877665432 111
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCceEEEEEeecccchhhhhccccCCCCCCCcccccccCcEEEEEeeccCCCC
Q psy10301 568 KFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVR 641 (1119)
Q Consensus 568 ~~~~~~~~~~~~~~i~~~a~~GlRtl~lAyr~l~~~~~~~~~~~~~~~~~~~~~~~ie~dl~~lG~igieDplr 641 (1119)
.++++ +.+.++.++.+|..++.+|. |-.++|++++.|++|
T Consensus 96 ~~~~~-----~~~~~~~~~~~G~Tvv~Va~-----------------------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 HFPTD-----VDQKVDQVARQGATPLVVVE-----------------------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp CCCHH-----HHHHHHHHHHTTSEEEEEEE-----------------------------TTEEEEEEEEEESSC
T ss_pred CCcHH-----HHHHHHHHHHCCCeEEEEEE-----------------------------CCEEEEEEEEEeecC
Confidence 12222 24567889999999999874 347999999999986
|