Psyllid ID: psy10559

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
Protein Sequence
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKRPTV
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEccEEEEccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEEEEEEEcccccccccccccccccccEEEEEEEEEcccccEEEEEEEEccccccEEEEcccccEEEEEEcccEEEEEEcccccccccEEEEEccccEEEEccEEEEEcccccccccccccccccccccccEEEccccccccccccccccccccccEEEEcccccccccEEEEEccccccEEEEEEEEccccccEEEEEEcccccccccccEEEEcccccEEEEEEEcccccEEEEEEcccccccEEEEEEEEcccccccccEEEEEEcccccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEcccEEEEccccccccccccccccccccccEEEcccccEEEEEEccccccccccccccccccccccccccccEccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHEcccccccccccccccccEEEEEEEEEEccccccEEEEEEEcccccccEEEEcccccEEEEEEcccEEEEEEEcccccccEEEEEEcccEEEEEccEEEEEcccccccccccccccccccccccEEEEccccccccccccccccccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHccHHHHHHHHHHHHccccccEEEEEcccccEEEEEEEccccccEEEEEcccccccHEEEEEEccccccccccEEEEEEEccccccEEEEcccccc
Coil and Loop (DISEMBL)
mrgfsnidVDLLwcnehgqckngtclcvtgwngkhctlegcpnscsnhgqcrvnsdsqweckcsdgwdgkdcSVLLEQncndgkdndkdglvdcedpeccsnhicrssqlcvsapkpidillrkqppaitASFFERMKFLIEEsslqnyakkdnfnesrSAVVRGRVVTSMGMGLVGVrvststplegftltrddgwfdllvngggavtlqfgrspfkphnhivhvpwnEVVIIDTItmqmgddrpvsttqhackdhdydtmkPVVLATWkhgfqgacpdrssILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMgrkyltpssniscassnppqvvqesfqipgtglnlVYHSSRSAGYLSTIQlqltpqvipDTLQLRKSLCKDFTHtltfyekrptv
Flexible Loop (DISEMBL)
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLqnyakkdnfnesrsavVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFThtltfyekrptv
Low Complexity Region (SEG)
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCndgkdndkdgLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTlkgkglvkllrmgrkYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKRPTV
Disordered region (IsUnstruct)
****SNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDG****KDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYA********RSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTP**************VQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFY******
Disordered Region (DISOPRED)
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQ**************KDHDYDTMKPVVLATWKH***********ILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKRP**
Disordered Region (DISEMBL)
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNI**********VQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKRPTV
Disordered Region (DISPRO)
*****NIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRGFSNIDVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTLTFYEKRPTV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	418	2.2.26 [Sep-21-2011]
O61307	2731	Teneurin-m OS=Drosophila	yes	N/A	0.667	0.102	0.789	1e-139
Q9VYN8	3004	Teneurin-a OS=Drosophila	no	N/A	0.820	0.114	0.433	2e-89
Q9W7R3	2824	Teneurin-4 OS=Danio rerio	yes	N/A	0.650	0.096	0.408	1e-59
Q9W6V6	2705	Teneurin-1 OS=Gallus gall	yes	N/A	0.650	0.100	0.404	3e-58
Q9WTS5	2764	Teneurin-2 OS=Mus musculu	yes	N/A	0.643	0.097	0.408	4e-57
Q9P273	2699	Teneurin-3 OS=Homo sapien	no	N/A	0.643	0.099	0.398	2e-56
Q9W7R4	2590	Teneurin-3 OS=Danio rerio	no	N/A	0.669	0.108	0.380	2e-56
Q9NT68	2774	Teneurin-2 OS=Homo sapien	yes	N/A	0.643	0.096	0.392	2e-55
Q6N022	2769	Teneurin-4 OS=Homo sapien	no	N/A	0.653	0.098	0.376	2e-55
Q9UKZ4	2725	Teneurin-1 OS=Homo sapien	no	N/A	0.653	0.100	0.391	3e-55

>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 221/280 (78%), Positives = 251/280 (89%), Gaps = 1/280 (0%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSC+ HGQCRV+ + QWEC+C +GWDG DC 
Sbjct: 715 CNEHGQCKNGTCLCVTGWNGKHCTIEGCPNSCAGHGQCRVSGEGQWECRCYEGWDGPDCG 774

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
           + LE NC D KDNDKDGLVDCEDPECC++H+C++SQLCVSAPKPID+LLRKQPPAITASF
Sbjct: 775 IALELNCGDSKDNDKDGLVDCEDPECCASHVCKTSQLCVSAPKPIDVLLRKQPPAITASF 834

Query: 134 FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
           FERMKFLI+ESSLQNYAK + FNESRSAV+RGRVVTS+GMGLVGVRVST+T LEGFTLTR
Sbjct: 835 FERMKFLIDESSLQNYAKLETFNESRSAVIRGRVVTSLGMGLVGVRVSTTTLLEGFTLTR 894

Query: 194 DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVS-TTQH 252
           DDGWFDL+VNGGGAVTLQFGR+PF+P + IV VPWNEVVIID + M M +++ ++ TT H
Sbjct: 895 DDGWFDLMVNGGGAVTLQFGRAPFRPQSRIVQVPWNEVVIIDLVVMSMSEEKGLAVTTTH 954

Query: 253 ACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLA+WKHGFQGACPDRS+ILAESQ  Q
Sbjct: 955 TCFAHDYDLMKPVVLASWKHGFQGACPDRSAILAESQVIQ 994

Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.
Drosophila melanogaster (taxid: 7227)

>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2

 Score =  329 bits (844), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 167/385 (43%), Positives = 237/385 (61%), Gaps = 42/385 (10%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            C+EHGQCKNGTC+C  GWNG+HCTL GC N CS HGQC +  + ++ C C +GW G+DCS
Sbjct: 761  CSEHGQCKNGTCVCSQGWNGRHCTLPGCENGCSRHGQCTL-ENGEYRCDCIEGWAGRDCS 819

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            + LE NC D  DND DG+ DC D ECCS+  C    +C+S+  P+++LLRKQPP++TASF
Sbjct: 820  IALELNCKDNIDNDGDGMTDCSDSECCSHPACSEHIMCLSSNDPVEVLLRKQPPSVTASF 879

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLE-GFTLT 192
            ++R+KFLIEE+S+Q+YA  D ++E+R +V+RG+V+T  G+G+VG+RVS       GFTLT
Sbjct: 880  YQRVKFLIEENSVQSYAHMDEYSENRVSVMRGQVITPQGLGIVGIRVSVDRDSRFGFTLT 939

Query: 193  RDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQH 252
            R  GWFD+LVNGGGAVTLQF RSPF+P    V VPWN +V++  + MQ+ DD   ++   
Sbjct: 940  RQGGWFDVLVNGGGAVTLQFQRSPFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS--- 996

Query: 253  ACKDHDYDTMKPVV--LATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASI 310
              ++     + P +  L +  +       D S +  +   ++L       P ++ T    
Sbjct: 997  --RNIKVAPLNPALTFLNSIHYHTADEANDASKVCMDHDHEKL------RPQLIST---- 1044

Query: 311  FYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVY 370
                   W     G               P   +  A +   Q+VQES QIPG+ L+L Y
Sbjct: 1045 -------WMPNGVGA-------------MPGKRVIFAET---QIVQESIQIPGSDLHLTY 1081

Query: 371  HSSRSAGYLSTIQLQLTPQVIPDTL 395
             SS+++GYLS ++++LT + IP TL
Sbjct: 1082 QSSQASGYLSIVRMRLTGETIPPTL 1106

Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-m to organize neuromuscular synapses.

Drosophila melanogaster (taxid: 7227)

>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 165/284 (58%), Gaps = 12/284 (4%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            C+EHG CK+G C C  GWNG+HCT+EGCP  C+ +G+C + ++  W C C  GW G  C 
Sbjct: 835  CSEHGTCKDGKCECSPGWNGEHCTIEGCPGLCNGNGRCTLGNNG-WYCVCQLGWRGAGCD 893

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITA-- 131
              +E  C+DGKDND DGL DC DP+CC    C ++ LCV +P P+DI+   Q  +  +  
Sbjct: 894  TSMETACSDGKDNDGDGLTDCMDPDCCLQASCHTTSLCVGSPDPLDIIQETQISSSLSTL 953

Query: 132  -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGF 189
             SF++R+ FL+   S       + F+   + V+RG+VVTS G  LVGV +S  + P  G+
Sbjct: 954  QSFYQRIHFLVGRDSTHVIPDVNPFDGIHACVIRGQVVTSDGTPLVGVNISFINKPAYGY 1013

Query: 190  TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMG-DDRPVS 248
            T+TR DG FDL+ NGG A+ L+F R+PF    H + +PW    ++DTI M+   +D P  
Sbjct: 1014 TITRQDGSFDLVSNGGVAIGLRFERAPFITQEHTLWLPWGRFFVMDTIVMRHEVNDIP-- 1071

Query: 249  TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
                +C    +    P+VL      F G CP+R  ++ E Q  Q
Sbjct: 1072 ----SCDLSSFTRPMPIVLPAPLTAFAGTCPERGIVVPEIQTLQ 1111

May function as a cellular signal transducer.

Danio rerio (taxid: 7955)

>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1

 Score =  226 bits (575), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/284 (40%), Positives = 163/284 (57%), Gaps = 12/284 (4%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C EHGQCK+G C C  GW G HCT++GCP  C  +G+C ++ +  W C C  GW G  C+
Sbjct: 711 CAEHGQCKDGKCECSPGWEGDHCTIDGCPGLCYGNGRCTLDQNG-WHCVCQVGWSGSGCN 769

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITAS- 132
           V++E  C D  DND DGL DC DP+CC  + C +S LC  +P P+D++   QPP      
Sbjct: 770 VVMEMACGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPP 829

Query: 133 --FFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLE-GF 189
             F++R++FLI + S        +F   R++V+RG+VV   G  LVGV VS     E G+
Sbjct: 830 RLFYDRIRFLIGKESTHVIPGDISFESRRASVIRGQVVAIDGTPLVGVNVSFLHHDEYGY 889

Query: 190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
           T++R DG FDL+  GG +VTL F RSPF      + + WN  VI+D + MQ  + D P  
Sbjct: 890 TISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLSWNRFVIVDKVVMQRAESDIP-- 947

Query: 249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
               +C    + +  P+VL +    F G+CP+R +++ E Q  Q
Sbjct: 948 ----SCDVSSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQ 987

May function as a cellular signal transducer.

Gallus gallus (taxid: 9031)

>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1

 Score =  222 bits (565), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/279 (40%), Positives = 166/279 (59%), Gaps = 10/279 (3%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            C EHG CK+G C C  GWNG+HCT++GCP+ C+ +G+C +  +S W+C C  GW G  C+
Sbjct: 773  CIEHGTCKDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNS-WQCVCQTGWRGPGCN 831

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQP--PAITA 131
            V +E +C D KDN+ DGLVDC DP+CC    C++S LC  +  P+DI+ + Q   PA+  
Sbjct: 832  VAMETSCADNKDNEGDGLVDCLDPDCCLQSACQNSLLCRGSRDPLDIIQQGQTDWPAV-K 890

Query: 132  SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGFT 190
            SF++R+K L  + S       + FN S  +++RG+VVT  G  LVGV VS    P  G+T
Sbjct: 891  SFYDRIKLLAGKDSTHIIPGDNPFNSSLVSLIRGQVVTMDGTPLVGVNVSFVKYPKYGYT 950

Query: 191  LTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTT 250
            +TR DG FDL+ NGG A+TL F R+PF      V +PWN    +DT+ M+  ++   S  
Sbjct: 951  ITRQDGTFDLIANGGSALTLHFERAPFMSQERTVWLPWNSFYAMDTLVMKTEENSIPS-- 1008

Query: 251  QHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
               C    +    P+++++    F  A P  + I+ E+Q
Sbjct: 1009 ---CDLSGFVRPDPIIISSPLSTFFSASPASNPIVPETQ 1044

May function as a cellular signal transducer.

Mus musculus (taxid: 10090)

>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3

 Score =  220 bits (560), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 112/281 (39%), Positives = 164/281 (58%), Gaps = 12/281 (4%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C EHG CK+G C C  GWNG+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct: 716 CAEHGTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 774

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDIL---LRKQPPAIT 130
           V +E  C D KDN+ DGL+DC DP+CC    C++   C   P P DI+   L+       
Sbjct: 775 VAMETLCTDSKDNEGDGLIDCMDPDCCLQSSCQNQPYCRGLPDPQDIISQSLQSPSQQAA 834

Query: 131 ASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGF 189
            SF++R+ FLI   S      +  FN+S ++V+RG+V+T+ G  L+GV VS    P  G+
Sbjct: 835 KSFYDRISFLIGSDSTHVIPGESPFNKSLASVIRGQVLTADGTPLIGVNVSFFHYPEYGY 894

Query: 190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
           T+TR DG FDL+ NGG ++TL F RSPF    H V +PWN   ++DT+ M+  + D P  
Sbjct: 895 TITRQDGMFDLVANGGASLTLVFERSPFLTQYHTVWIPWNVFYVMDTLVMKKEENDIP-- 952

Query: 249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
               +C    +    P+++++    F  + P+ S I+ E+Q
Sbjct: 953 ----SCDLSGFVRPNPIIVSSPLSTFFRSSPEDSPIIPETQ 989

May function as a cellular signal transducer.

Homo sapiens (taxid: 9606)

>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1

 Score =  220 bits (560), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 169/297 (56%), Gaps = 17/297 (5%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C EHG CK+G C C  GW G+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct: 606 CTEHGTCKDGKCECHQGWTGEHCTVEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 664

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPA---IT 130
           V +E  C DGKD++ DGLVDC DP+CC    C++   C  +P P DI+ + QP +     
Sbjct: 665 VAMETLCADGKDSEGDGLVDCMDPDCCLQSSCQTQPFCRGSPDPFDIISQNQPASPQQAA 724

Query: 131 ASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGF 189
            SF++++ FL    S      ++ FN S  +++RG+V+T+ G  L+GV VS    P  G+
Sbjct: 725 QSFYQQISFLTGPESTHVINGENPFNRSLVSIIRGQVLTADGTPLIGVNVSFVHYPDHGY 784

Query: 190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
           T+T+ DG FD+L NGG ++TL F R+PF      V +PWN   ++DT+ M+  + D P  
Sbjct: 785 TITQQDGMFDILANGGASLTLSFERAPFLTQFRTVWIPWNVFYVMDTLVMKKEENDIP-- 842

Query: 249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQL-----GSKLAIM 300
               +C    +    P+++AT    F  + P+   I+ E+Q  Q      GS L +M
Sbjct: 843 ----SCDLSGFIRPSPLIVATPLSTFFRSSPENGPIIPETQVLQEETAIPGSDLNLM 895

May function as a cellular signal transducer.

Danio rerio (taxid: 7955)

>sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=TENM2 PE=1 SV=3

 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 169/288 (58%), Gaps = 19/288 (6%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTL---------EGCPNSCSNHGQCRVNSDSQWECKCS 64
            C EHG CK+G C C  GWNG+HCT+         +GCP+ C+ +G+C +  +S W+C C 
Sbjct: 774  CIEHGTCKDGKCECREGWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNS-WQCVCQ 832

Query: 65   DGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK 124
             GW G  C+V +E +C D KDN+ DGLVDC DP+CC    C++S LC  +  P+DI+ + 
Sbjct: 833  TGWRGPGCNVAMETSCADNKDNEGDGLVDCLDPDCCLQSACQNSLLCRGSRDPLDIIQQG 892

Query: 125  QP--PAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS- 181
            Q   PA+  SF++R+K L  + S      ++ FN S  +++RG+VVT+ G  LVGV VS 
Sbjct: 893  QTDWPAV-KSFYDRIKLLAGKDSTHIIPGENPFNSSLVSLIRGQVVTTDGTPLVGVNVSF 951

Query: 182  TSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQM 241
               P  G+T+TR DG FDL+ NGG ++TL F R+PF      V +PWN    +DT+ M+ 
Sbjct: 952  VKYPKYGYTITRQDGTFDLIANGGASLTLHFERAPFMSQERTVWLPWNSFYAMDTLVMKT 1011

Query: 242  GDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
             ++   S     C    +    P+++++    F  A P ++ I+ E+Q
Sbjct: 1012 EENSIPS-----CDLSGFVRPDPIIISSPLSTFFSAAPGQNPIVPETQ 1054

May function as a cellular signal transducer.

Homo sapiens (taxid: 9606)

>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=TENM4 PE=1 SV=2

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/292 (37%), Positives = 165/292 (56%), Gaps = 19/292 (6%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTL---------EGCPNSCSNHGQCRVNSDSQWECKCS 64
            C EHG C++G C C  GWNG+HCT+         EGCP  C+ +G+C ++ +  W C C 
Sbjct: 764  CAEHGTCRDGKCECSPGWNGEHCTIAHYLDRVVKEGCPGLCNGNGRCTLDLNG-WHCVCQ 822

Query: 65   DGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK 124
             GW G  C   +E  C D KDND DGLVDC DP+CC   +C  + LC+ +P P+DI+   
Sbjct: 823  LGWRGAGCDTSMETACGDSKDNDGDGLVDCMDPDCCLQPLCHINPLCLGSPNPLDIIQET 882

Query: 125  QPPAITA---SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS 181
            Q P       SF++R+KFL+   S      ++ F+   + V+RG+V+TS G  LVGV +S
Sbjct: 883  QVPVSQQNLHSFYDRIKFLVGRDSTHIIPGENPFDGGHACVIRGQVMTSDGTPLVGVNIS 942

Query: 182  -TSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQ 240
              + PL G+T++R DG FDL+ NGG ++ L+F R+PF    H + +PW+   +++TI M+
Sbjct: 943  FVNNPLFGYTISRQDGSFDLVTNGGISIILRFERAPFITQEHTLWLPWDRFFVMETIIMR 1002

Query: 241  MGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
              ++   S     C   ++    PVV  +    F  +C ++  I+ E Q  Q
Sbjct: 1003 HEENEIPS-----CDLSNFARPNPVVSPSPLTSFASSCAEKGPIVPEIQALQ 1049

May function as a cellular signal transducer.

Homo sapiens (taxid: 9606)

>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 164/291 (56%), Gaps = 18/291 (6%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTL--------EGCPNSCSNHGQCRVNSDSQWECKCSD 65
            C EHGQCK+G C C  GW G HCT+        +GCP  C  +G+C ++ +  W C C  
Sbjct: 730  CTEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNG-WHCVCQV 788

Query: 66   GWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQ 125
            GW G  C+V++E  C D  DND DGL DC DP+CC    C  S LC  +P P+D++ + Q
Sbjct: 789  GWSGTGCNVVMEMLCGDNLDNDGDGLTDCVDPDCCQQSNCYISPLCQGSPDPLDLIQQSQ 848

Query: 126  ---PPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVST 182
                   +  F++R+KFLI + S      + +F+  R+ V+RG+VV   G  LVGV VS 
Sbjct: 849  TLFSQHTSRLFYDRIKFLIGKDSTHVIPPEVSFDSRRACVIRGQVVAIDGTPLVGVNVSF 908

Query: 183  STPLE-GFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQM 241
                + GFT++R DG FDL+  GG +V L F RSPF P    + +PWN+ ++++ +TMQ 
Sbjct: 909  LHHSDYGFTISRQDGSFDLVAIGGISVILIFDRSPFLPEKRTLWLPWNQFIVVEKVTMQR 968

Query: 242  GDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
                P S     C   ++ +  P+VL +    F G+CP+R +I+ E Q  Q
Sbjct: 969  VVSDPPS-----CDISNFISPNPIVLPSPLTSFGGSCPERGTIVPELQVVQ 1014

May function as a cellular signal transducer.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	418
307187110	3344	Teneurin-3 [Camponotus floridanus]	0.765	0.095	0.671	1e-146
328785592	3404	PREDICTED: teneurin-3 isoform 1 [Apis me	0.629	0.077	0.842	1e-145
307196795	3360	Teneurin-3 [Harpegnathos saltator]	0.629	0.078	0.838	1e-145
340721624	3454	PREDICTED: teneurin-3-like [Bombus terre	0.653	0.079	0.838	1e-145
350404731	3457	PREDICTED: teneurin-3-like [Bombus impat	0.653	0.078	0.838	1e-145
380012905	2564	PREDICTED: teneurin-3-like [Apis florea]	0.765	0.124	0.669	1e-144
332023466	3373	Teneurin-3 [Acromyrmex echinatior]	0.629	0.077	0.831	1e-144
91081003	3108	PREDICTED: similar to odd Oz protein [Tr	0.614	0.082	0.820	1e-143
270006439	2957	tenascin major [Tribolium castaneum]	0.614	0.086	0.820	1e-143
345493429	3237	PREDICTED: teneurin-3-like [Nasonia vitr	0.765	0.098	0.656	1e-141

>gi|307187110|gb|EFN72354.1| Teneurin-3 [Camponotus floridanus]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/384 (67%), Positives = 282/384 (73%), Gaps = 64/384 (16%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV++D+QWEC+C DGWDGKDCS
Sbjct: 1333 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVSNDAQWECQCYDGWDGKDCS 1392

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNCNDG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1393 VLLEQNCNDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 1452

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAV+RGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1453 FERMKFLIDEGSLQNYARQETFNESRSAVIRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1512

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++P     HA
Sbjct: 1513 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKPPVHVPHA 1572

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQ 313
            C  HDYD MK                                     P VL T       
Sbjct: 1573 CAAHDYDLMK-------------------------------------PVVLAT------- 1588

Query: 314  IGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSS 373
                W+   +G               P  +   A S   QV+QES QIPGTGLNLVYHSS
Sbjct: 1589 ----WKHGFQGA-------------CPDKSAILAES---QVIQESLQIPGTGLNLVYHSS 1628

Query: 374  RSAGYLSTIQLQLTPQVIPDTLQL 397
            R+AGYLSTIQLQLTP+VIP TL L
Sbjct: 1629 RAAGYLSTIQLQLTPEVIPATLNL 1652

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785592|ref|XP_394215.4| PREDICTED: teneurin-3 isoform 1 [Apis mellifera]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 235/279 (84%), Positives = 254/279 (91%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV++D QWEC+C DGWDGKDC+
Sbjct: 1394 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVSNDGQWECRCYDGWDGKDCN 1453

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNCNDG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1454 VLLEQNCNDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 1513

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1514 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1573

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++  S   HA
Sbjct: 1574 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKQPSHVPHA 1633

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLATWKHGFQGACPD+S+ILAESQ  Q
Sbjct: 1634 CAAHDYDLMKPVVLATWKHGFQGACPDKSAILAESQVIQ 1672

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196795|gb|EFN78238.1| Teneurin-3 [Harpegnathos saltator]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/279 (83%), Positives = 256/279 (91%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS+HGQCRV++D+QWEC+C DGWDGKDC+
Sbjct: 1349 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSSHGQCRVSNDAQWECQCYDGWDGKDCN 1408

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNC+DG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1409 VLLEQNCSDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 1468

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1469 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1528

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++P     HA
Sbjct: 1529 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKPPLHVPHA 1588

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLATWKHGFQGACPD+S+ILAESQ  Q
Sbjct: 1589 CTAHDYDIMKPVVLATWKHGFQGACPDKSAILAESQVIQ 1627

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721624|ref|XP_003399217.1| PREDICTED: teneurin-3-like [Bombus terrestris]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/279 (83%), Positives = 253/279 (90%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV +D QWEC+C DGWDGKDC+
Sbjct: 1441 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVGNDGQWECRCYDGWDGKDCN 1500

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNCNDG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1501 VLLEQNCNDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 1560

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1561 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1620

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++  S   +A
Sbjct: 1621 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKQTSHIPYA 1680

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLATWKHGFQGACPD+S+ILAESQ  Q
Sbjct: 1681 CAAHDYDLMKPVVLATWKHGFQGACPDKSAILAESQVIQ 1719

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404731|ref|XP_003487201.1| PREDICTED: teneurin-3-like [Bombus impatiens]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/279 (83%), Positives = 253/279 (90%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV +D QWEC+C DGWDGKDC+
Sbjct: 1444 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVGNDGQWECRCYDGWDGKDCN 1503

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNCNDG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1504 VLLEQNCNDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 1563

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1564 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1623

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++  S   +A
Sbjct: 1624 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKQTSHIPYA 1683

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLATWKHGFQGACPD+S+ILAESQ  Q
Sbjct: 1684 CAAHDYDLMKPVVLATWKHGFQGACPDKSAILAESQVIQ 1722

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012905|ref|XP_003690513.1| PREDICTED: teneurin-3-like [Apis florea]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/384 (66%), Positives = 281/384 (73%), Gaps = 64/384 (16%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV++D QWEC+C DGWDGKDC+
Sbjct: 554 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVSNDGQWECRCYDGWDGKDCN 613

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
           VLLEQNCNDG+DNDKDGL+DC DPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 614 VLLEQNCNDGRDNDKDGLIDCADPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 673

Query: 134 FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
           FERMKFLI+E SLQNYA+++ FNESRSAVVRGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 674 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 733

Query: 194 DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
           DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++  +   HA
Sbjct: 734 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIVMSTAEEKQPNHVPHA 793

Query: 254 CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQ 313
           C  HDYD MK                                     P VL T       
Sbjct: 794 CAAHDYDLMK-------------------------------------PVVLAT------- 809

Query: 314 IGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSS 373
               W+   +G               P  +   A S   QV+QES QIPGTGLNLVYHSS
Sbjct: 810 ----WKHGFQGA-------------CPDKSAILAES---QVIQESLQIPGTGLNLVYHSS 849

Query: 374 RSAGYLSTIQLQLTPQVIPDTLQL 397
           R+AGYLSTIQLQLTP+VIP TL L
Sbjct: 850 RAAGYLSTIQLQLTPEVIPPTLNL 873

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023466|gb|EGI63709.1| Teneurin-3 [Acromyrmex echinatior]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 232/279 (83%), Positives = 254/279 (91%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS HGQCRV++D+QWEC+C +GWDGKDCS
Sbjct: 1335 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSGHGQCRVSNDAQWECQCYNGWDGKDCS 1394

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            VLLEQNC+DG+DNDKDGL+DC DPECCSNHIC SSQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1395 VLLEQNCSDGRDNDKDGLIDCADPECCSNHICHSSQLCVSAPKPIDILLRKQPPAITASF 1454

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAV+RGRVVT +G GL+GVRVSTSTPLEGFTLTR
Sbjct: 1455 FERMKFLIDEGSLQNYARQETFNESRSAVIRGRVVTHLGTGLMGVRVSTSTPLEGFTLTR 1514

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVIID I M   +++P     HA
Sbjct: 1515 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIIDKIIMSTAEEKPPIHVPHA 1574

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HDYD MKPVVLATWKHGFQGACPD+S+ILAESQ  Q
Sbjct: 1575 CAAHDYDLMKPVVLATWKHGFQGACPDKSAILAESQVIQ 1613

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081003|ref|XP_975140.1| PREDICTED: similar to odd Oz protein [Tribolium castaneum]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 229/279 (82%), Positives = 252/279 (90%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS+HGQCR N+DS WEC+C +GWDG DCS
Sbjct: 1107 CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSSHGQCRFNTDSMWECRCDNGWDGPDCS 1166

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            +LLEQNCND +DNDKDGLVDCEDPECCSN +C SSQLCVS+PKPIDILLRKQPPAITASF
Sbjct: 1167 ILLEQNCNDSRDNDKDGLVDCEDPECCSNRLCTSSQLCVSSPKPIDILLRKQPPAITASF 1226

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRV+T MG GL+GVRVSTSTPLEGFTLTR
Sbjct: 1227 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVITQMGTGLMGVRVSTSTPLEGFTLTR 1286

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGR+PF+P  HIV VPWNEVVIID + M  G+++PVS     
Sbjct: 1287 DDGWFDLLVNGGGAVTLQFGRAPFRPQTHIVFVPWNEVVIIDNVIMTTGEEKPVSALPQP 1346

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HD+DTMKPVVLATWKHGFQGACPDRS+ILAESQ  Q
Sbjct: 1347 CTAHDFDTMKPVVLATWKHGFQGACPDRSAILAESQVVQ 1385

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270006439|gb|EFA02887.1| tenascin major [Tribolium castaneum]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 229/279 (82%), Positives = 252/279 (90%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSCS+HGQCR N+DS WEC+C +GWDG DCS
Sbjct: 956  CNEHGQCKNGTCLCVTGWNGKHCTMEGCPNSCSSHGQCRFNTDSMWECRCDNGWDGPDCS 1015

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            +LLEQNCND +DNDKDGLVDCEDPECCSN +C SSQLCVS+PKPIDILLRKQPPAITASF
Sbjct: 1016 ILLEQNCNDSRDNDKDGLVDCEDPECCSNRLCTSSQLCVSSPKPIDILLRKQPPAITASF 1075

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI+E SLQNYA+++ FNESRSAVVRGRV+T MG GL+GVRVSTSTPLEGFTLTR
Sbjct: 1076 FERMKFLIDEGSLQNYARQETFNESRSAVVRGRVITQMGTGLMGVRVSTSTPLEGFTLTR 1135

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGR+PF+P  HIV VPWNEVVIID + M  G+++PVS     
Sbjct: 1136 DDGWFDLLVNGGGAVTLQFGRAPFRPQTHIVFVPWNEVVIIDNVIMTTGEEKPVSALPQP 1195

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
            C  HD+DTMKPVVLATWKHGFQGACPDRS+ILAESQ  Q
Sbjct: 1196 CTAHDFDTMKPVVLATWKHGFQGACPDRSAILAESQVVQ 1234

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493429|ref|XP_001605548.2| PREDICTED: teneurin-3-like [Nasonia vitripennis]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 252/384 (65%), Positives = 279/384 (72%), Gaps = 64/384 (16%)

Query: 14   CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            CNEHGQCKNGTCLCVTGWNG+HCT+EGCPNSCS HGQC+VNSD+QWEC+C DGW+GKDCS
Sbjct: 1222 CNEHGQCKNGTCLCVTGWNGRHCTMEGCPNSCSGHGQCKVNSDAQWECRCYDGWNGKDCS 1281

Query: 74   VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
            V LEQ+C+DG+DNDKDGLVDC DPECCSN  CR+SQLCVSAPKPIDILLRKQPPAITASF
Sbjct: 1282 VYLEQDCSDGRDNDKDGLVDCADPECCSNAKCRTSQLCVSAPKPIDILLRKQPPAITASF 1341

Query: 134  FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
            FERMKFLI++ SLQNYA+++ FNESRSAVVRGRVVTS+GMGL+GVRVSTSTP EGFTLTR
Sbjct: 1342 FERMKFLIDDGSLQNYARQETFNESRSAVVRGRVVTSLGMGLMGVRVSTSTPQEGFTLTR 1401

Query: 194  DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQHA 253
            DDGWFDLLVNGGGAVTLQFGRSPFKP +HIV VPWNEVVII+ I M   D++      H+
Sbjct: 1402 DDGWFDLLVNGGGAVTLQFGRSPFKPQSHIVFVPWNEVVIINKIVMSTADEKTPVHVIHS 1461

Query: 254  CKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQ 313
            C  HDYD MK                                     P VL T       
Sbjct: 1462 CAAHDYDLMK-------------------------------------PVVLAT------- 1477

Query: 314  IGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSNPPQVVQESFQIPGTGLNLVYHSS 373
                W+   +G               P  +   A S   QVVQES QIPGTGLNLVYHSS
Sbjct: 1478 ----WKHGFQGA-------------CPDKSAILAES---QVVQESLQIPGTGLNLVYHSS 1517

Query: 374  RSAGYLSTIQLQLTPQVIPDTLQL 397
            R+AGYLSTIQLQLTP+VIP TL L
Sbjct: 1518 RAAGYLSTIQLQLTPEVIPPTLNL 1541

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	418
FB|FBgn0004449	2731	Ten-m "Tenascin major" [Drosop	0.667	0.102	0.760	3.1e-139
FB|FBgn0259240	3378	Ten-a "Tenascin accessory" [Dr	0.550	0.068	0.543	3.9e-83
ZFIN|ZDB-GENE-060503-100	2515	si:ch211-12m10.1 "si:ch211-12m	0.645	0.107	0.374	2.4e-59
UNIPROTKB|J9NRQ0	2429	ODZ3 "Uncharacterized protein"	0.643	0.110	0.384	7.1e-59
UNIPROTKB|Q9P273	2699	TENM3 "Teneurin-3" [Homo sapie	0.643	0.099	0.384	9.5e-59
UNIPROTKB|F1P9A6	2699	ODZ3 "Uncharacterized protein"	0.643	0.099	0.384	9.6e-59
RGD|1306641	2529	Tenm3 "teneurin transmembrane	0.643	0.106	0.387	2.1e-58
MGI|MGI:1345184	2764	Tenm2 "teneurin transmembrane	0.643	0.097	0.387	2.1e-58
UNIPROTKB|F1M0Y7	2598	Odz2 "Protein Odz2" [Rattus no	0.643	0.103	0.387	2.3e-58
ZFIN|ZDB-GENE-990714-20	2849	odz4 "odd Oz/ten-m homolog 4"	0.650	0.095	0.380	2.9e-58

FB|FBgn0004449 Ten-m "Tenascin major" [Drosophila melanogaster (taxid:7227)]

 Score = 1223 (435.6 bits), Expect = 3.1e-139, Sum P(2) = 3.1e-139
 Identities = 213/280 (76%), Positives = 243/280 (86%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             CNEHGQCKNGTCLCVTGWNGKHCT+EGCPNSC+ HGQCRV+ + QWEC+C +GWDG DC 
Sbjct:   715 CNEHGQCKNGTCLCVTGWNGKHCTIEGCPNSCAGHGQCRVSGEGQWECRCYEGWDGPDCG 774

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
             + LE NC          LVDCEDPECC++H+C++SQLCVSAPKPID+LLRKQPPAITASF
Sbjct:   775 IALELNCGDSKDNDKDGLVDCEDPECCASHVCKTSQLCVSAPKPIDVLLRKQPPAITASF 834

Query:   134 FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTLTR 193
             FERMKFLI+ESSLQNYAK + FNESRSAV+RGRVVTS+GMGLVGVRVST+T LEGFTLTR
Sbjct:   835 FERMKFLIDESSLQNYAKLETFNESRSAVIRGRVVTSLGMGLVGVRVSTTTLLEGFTLTR 894

Query:   194 DDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVS-TTQH 252
             DDGWFDL+VNGGGAVTLQFGR+PF+P + IV VPWNEVVIID + M M +++ ++ TT H
Sbjct:   895 DDGWFDLMVNGGGAVTLQFGRAPFRPQSRIVQVPWNEVVIIDLVVMSMSEEKGLAVTTTH 954

Query:   253 ACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
              C  HDYD MKPVVLA+WKHGFQGACPDRS+ILAESQ  Q
Sbjct:   955 TCFAHDYDLMKPVVLASWKHGFQGACPDRSAILAESQVIQ 994

GO:0005578 "proteinaceous extracellular matrix" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS;IMP

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0042051 "compound eye photoreceptor development" evidence=IMP

GO:0001745 "compound eye morphogenesis" evidence=IMP

GO:0048058 "compound eye corneal lens development" evidence=IMP

GO:0022416 "chaeta development" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0031005 "filamin binding" evidence=IDA

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:0016200 "synaptic target attraction" evidence=IMP

GO:0042802 "identical protein binding" evidence=IDA

FB|FBgn0259240 Ten-a "Tenascin accessory" [Drosophila melanogaster (taxid:7227)]

 Score = 757 (271.5 bits), Expect = 3.9e-83, Sum P(2) = 3.9e-83
 Identities = 126/232 (54%), Positives = 169/232 (72%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C+EHGQCKNGTC+C  GWNG+HCTL GC N CS HGQC + +  ++ C C +GW G+DCS
Sbjct:  1135 CSEHGQCKNGTCVCSQGWNGRHCTLPGCENGCSRHGQCTLEN-GEYRCDCIEGWAGRDCS 1193

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF 133
             + LE NC          + DC D ECCS+  C    +C+S+  P+++LLRKQPP++TASF
Sbjct:  1194 IALELNCKDNIDNDGDGMTDCSDSECCSHPACSEHIMCLSSNDPVEVLLRKQPPSVTASF 1253

Query:   134 FERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLE-GFTLT 192
             ++R+KFLIEE+S+Q+YA  D ++E+R +V+RG+V+T  G+G+VG+RVS       GFTLT
Sbjct:  1254 YQRVKFLIEENSVQSYAHMDEYSENRVSVMRGQVITPQGLGIVGIRVSVDRDSRFGFTLT 1313

Query:   193 RDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDD 244
             R  GWFD+LVNGGGAVTLQF RSPF+P    V VPWN +V++  + MQ+ DD
Sbjct:  1314 RQGGWFDVLVNGGGAVTLQFQRSPFRPLTRTVFVPWNRIVVLPPVQMQLSDD 1365

GO:0005578 "proteinaceous extracellular matrix" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0005576 "extracellular region" evidence=ISS

GO:0007160 "cell-matrix adhesion" evidence=ISS

GO:0005886 "plasma membrane" evidence=NAS

GO:0008039 "synaptic target recognition" evidence=IMP

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0042734 "presynaptic membrane" evidence=IDA

GO:0016200 "synaptic target attraction" evidence=IMP

ZFIN|ZDB-GENE-060503-100 si:ch211-12m10.1 "si:ch211-12m10.1" [Danio rerio (taxid:7955)]

 Score = 546 (197.3 bits), Expect = 2.4e-59, Sum P(2) = 2.4e-59
 Identities = 104/278 (37%), Positives = 158/278 (56%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C +HG C++G C C  GWNG+HCT++GCP  C+ +GQC +  +S W C+C  GW G  CS
Sbjct:   536 CVKHGTCRDGKCQCEQGWNGEHCTIDGCPGLCNGNGQCIMGQNS-WHCECHTGWRGPGCS 594

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITA-S 132
             V +E +C          LVDC DP+CC+   C ++ LC  +  P+ ++ + Q       S
Sbjct:   595 VAMETSCNDNKDNEGDGLVDCMDPDCCTQSSCMTNPLCRGSRDPLQVIQQSQSEVQKVPS 654

Query:   133 FFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGFTL 191
             F++R+K L+ + S       + FN S ++++RG+V+TS G  LVGV V+    P  G T+
Sbjct:   655 FYDRIKMLVGKDSTHIIPGINPFNASLASLIRGQVLTSDGTPLVGVNVTFVKYPHYGHTM 714

Query:   192 TRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTTQ 251
             TR DG FDL+ NGGG++ L+F R+PF+     V +PWN    +DT+ +Q  +++P +   
Sbjct:   715 TRQDGTFDLVANGGGSLALRFERAPFQSQERTVWLPWNRFYAMDTLVLQT-EEKPTAR-- 771

Query:   252 HACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
               C    +    P+VL +    F  + P    IL ESQ
Sbjct:   772 --CDLSGFVRPDPIVLPSPLSSFFSSNPSERHILPESQ 807

GO:0007165 "signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9NRQ0 ODZ3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 552 (199.4 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
 Identities = 108/281 (38%), Positives = 160/281 (56%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct:   446 CAEHGTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 504

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK-QPPAITA- 131
             V +E  C          LVDC DP+CC    C++   C   P P D++ +  Q P+  A 
Sbjct:   505 VAMETLCTDSKDNEGDGLVDCMDPDCCLQSSCQNQPYCRGLPDPQDVISQSLQSPSQQAA 564

Query:   132 -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVST-STPLEGF 189
              SF++R+ FLI   S      +  FN+S ++V+RG+V+T+ G  L+GV VS    P  G+
Sbjct:   565 KSFYDRISFLIGSDSTHVIPGETPFNKSLASVIRGQVLTADGTPLIGVNVSFFHYPEYGY 624

Query:   190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
             T+TR DG FDL+ NGG ++TL F RSPF    H V +PWN   ++DT+ M+  + D P  
Sbjct:   625 TITRQDGMFDLVANGGASLTLVFERSPFLTQYHTVWIPWNVFYVMDTLVMKKEENDIP-- 682

Query:   249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                 +C    +    P+++++    F  + P+ S I+ E+Q
Sbjct:   683 ----SCDLSGFVRPNPIIVSSPLSTFFRSSPEDSPIIPETQ 719

GO:0016021 "integral to membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|Q9P273 TENM3 "Teneurin-3" [Homo sapiens (taxid:9606)]

 Score = 553 (199.7 bits), Expect = 9.5e-59, Sum P(2) = 9.5e-59
 Identities = 108/281 (38%), Positives = 160/281 (56%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct:   716 CAEHGTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 774

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK-QPPAITA- 131
             V +E  C          L+DC DP+CC    C++   C   P P DI+ +  Q P+  A 
Sbjct:   775 VAMETLCTDSKDNEGDGLIDCMDPDCCLQSSCQNQPYCRGLPDPQDIISQSLQSPSQQAA 834

Query:   132 -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVST-STPLEGF 189
              SF++R+ FLI   S      +  FN+S ++V+RG+V+T+ G  L+GV VS    P  G+
Sbjct:   835 KSFYDRISFLIGSDSTHVIPGESPFNKSLASVIRGQVLTADGTPLIGVNVSFFHYPEYGY 894

Query:   190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
             T+TR DG FDL+ NGG ++TL F RSPF    H V +PWN   ++DT+ M+  + D P  
Sbjct:   895 TITRQDGMFDLVANGGASLTLVFERSPFLTQYHTVWIPWNVFYVMDTLVMKKEENDIP-- 952

Query:   249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                 +C    +    P+++++    F  + P+ S I+ E+Q
Sbjct:   953 ----SCDLSGFVRPNPIIVSSPLSTFFRSSPEDSPIIPETQ 989

GO:0007165 "signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0046982 "protein heterodimerization activity" evidence=ISS

GO:0007156 "homophilic cell adhesion" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0010976 "positive regulation of neuron projection development" evidence=ISS

UNIPROTKB|F1P9A6 ODZ3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 552 (199.4 bits), Expect = 9.6e-59, Sum P(2) = 9.6e-59
 Identities = 108/281 (38%), Positives = 160/281 (56%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct:   716 CAEHGTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 774

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK-QPPAITA- 131
             V +E  C          LVDC DP+CC    C++   C   P P D++ +  Q P+  A 
Sbjct:   775 VAMETLCTDSKDNEGDGLVDCMDPDCCLQSSCQNQPYCRGLPDPQDVISQSLQSPSQQAA 834

Query:   132 -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVST-STPLEGF 189
              SF++R+ FLI   S      +  FN+S ++V+RG+V+T+ G  L+GV VS    P  G+
Sbjct:   835 KSFYDRISFLIGSDSTHVIPGETPFNKSLASVIRGQVLTADGTPLIGVNVSFFHYPEYGY 894

Query:   190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
             T+TR DG FDL+ NGG ++TL F RSPF    H V +PWN   ++DT+ M+  + D P  
Sbjct:   895 TITRQDGMFDLVANGGASLTLVFERSPFLTQYHTVWIPWNVFYVMDTLVMKKEENDIP-- 952

Query:   249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                 +C    +    P+++++    F  + P+ S I+ E+Q
Sbjct:   953 ----SCDLSGFVRPNPIIVSSPLSTFFRSSPEDSPIIPETQ 989

GO:0016021 "integral to membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

RGD|1306641 Tenm3 "teneurin transmembrane protein 3" [Rattus norvegicus (taxid:10116)]

 Score = 554 (200.1 bits), Expect = 2.1e-58, Sum P(2) = 2.1e-58
 Identities = 109/281 (38%), Positives = 161/281 (57%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT+EGCP  C+++G+C ++ +  W C C  GW G  C 
Sbjct:   546 CAEHGTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG-WHCVCQPGWRGAGCD 604

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK-QPPAITA- 131
             V +E  C          LVDC DP+CC    C++   C   P P D++ +  Q P+  A 
Sbjct:   605 VAMETLCTDSKDNEGDGLVDCMDPDCCLQSSCQNQPYCRGLPDPQDVISQSLQTPSQQAA 664

Query:   132 -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLE-GF 189
              SF++R+ FLI   S      +  FN+S ++V+RG+V+T+ G  L+GV VS     E G+
Sbjct:   665 KSFYDRISFLIGSDSTHVLPGESPFNKSLASVIRGQVLTADGTPLIGVNVSFLHYSEYGY 724

Query:   190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGD-DRPVS 248
             T+TR DG FDL+ NGG ++TL F RSPF   +H V +PWN   ++DT+ M+  + D P  
Sbjct:   725 TITRQDGMFDLVANGGASLTLVFERSPFLTQHHTVWIPWNVFYVMDTLVMKKEENDIP-- 782

Query:   249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                 +C    +    PV++++    F  + P+ S I+ E+Q
Sbjct:   783 ----SCDLSGFVRPSPVIVSSPLSTFFRSSPEDSPIIPETQ 819

GO:0007156 "homophilic cell adhesion" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0046982 "protein heterodimerization activity" evidence=ISO

MGI|MGI:1345184 Tenm2 "teneurin transmembrane protein 2" [Mus musculus (taxid:10090)]

 Score = 550 (198.7 bits), Expect = 2.1e-58, Sum P(2) = 2.1e-58
 Identities = 108/279 (38%), Positives = 159/279 (56%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT++GCP+ C+ +G+C +  +S W+C C  GW G  C+
Sbjct:   773 CIEHGTCKDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNS-WQCVCQTGWRGPGCN 831

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQP--PAITA 131
             V +E +C          LVDC DP+CC    C++S LC  +  P+DI+ + Q   PA+  
Sbjct:   832 VAMETSCADNKDNEGDGLVDCLDPDCCLQSACQNSLLCRGSRDPLDIIQQGQTDWPAVK- 890

Query:   132 SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGFT 190
             SF++R+K L  + S       + FN S  +++RG+VVT  G  LVGV VS    P  G+T
Sbjct:   891 SFYDRIKLLAGKDSTHIIPGDNPFNSSLVSLIRGQVVTMDGTPLVGVNVSFVKYPKYGYT 950

Query:   191 LTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTT 250
             +TR DG FDL+ NGG A+TL F R+PF      V +PWN    +DT+ M+  ++   S  
Sbjct:   951 ITRQDGTFDLIANGGSALTLHFERAPFMSQERTVWLPWNSFYAMDTLVMKTEENSIPS-- 1008

Query:   251 QHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                C    +    P+++++    F  A P  + I+ E+Q
Sbjct:  1009 ---CDLSGFVRPDPIIISSPLSTFFSASPASNPIVPETQ 1044

GO:0005102 "receptor binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007157 "heterophilic cell-cell adhesion" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007411 "axon guidance" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0035584 "calcium-mediated signaling using intracellular calcium source" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0042995 "cell projection" evidence=IEA

GO:0043005 "neuron projection" evidence=ISO

GO:0043197 "dendritic spine" evidence=ISO

GO:0045202 "synapse" evidence=ISO

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0046982 "protein heterodimerization activity" evidence=IDA

GO:0050839 "cell adhesion molecule binding" evidence=ISO

UNIPROTKB|F1M0Y7 Odz2 "Protein Odz2" [Rattus norvegicus (taxid:10116)]

 Score = 552 (199.4 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
 Identities = 108/279 (38%), Positives = 160/279 (57%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C EHG CK+G C C  GWNG+HCT++GCP+ C+ +G+C +  +S W+C C  GW G  C+
Sbjct:   607 CIEHGTCKDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNS-WQCVCQTGWRGPGCN 665

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQP--PAITA 131
             V +E +C          LVDC DP+CC    C++S LC  +  P+DI+ + Q   PA+  
Sbjct:   666 VAMETSCADNKDNEGDGLVDCLDPDCCLQSACQNSLLCRGSRDPLDIIQQGQTDWPAVK- 724

Query:   132 SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGFT 190
             SF++R+K L  + S       + FN S  +++RG+VVT+ G  LVGV VS    P  G+T
Sbjct:   725 SFYDRIKLLAGKDSTHIIPGDNPFNSSLVSLIRGQVVTTDGTPLVGVNVSFVKYPKYGYT 784

Query:   191 LTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVSTT 250
             +TR DG FDL+ NGG A+TL F R+PF      V +PWN    +DT+ M+  ++   S  
Sbjct:   785 ITRQDGTFDLIANGGSALTLHFERAPFMSQERTVWLPWNSFYAMDTLVMKTEENSIPS-- 842

Query:   251 QHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQ 289
                C    +    P+++++    F  A P  + I+ E+Q
Sbjct:   843 ---CDLSGFVRPDPIIISSPLSTFFSASPAANPIVPETQ 878

GO:0007165 "signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-990714-20 odz4 "odd Oz/ten-m homolog 4" [Danio rerio (taxid:7955)]

 Score = 553 (199.7 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
 Identities = 108/284 (38%), Positives = 156/284 (54%)

Query:    14 CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
             C+EHG CK+G C C  GWNG+HCT+EGCP  C+ +G+C + ++  W C C  GW G  C 
Sbjct:   860 CSEHGTCKDGKCECSPGWNGEHCTIEGCPGLCNGNGRCTLGNNG-WYCVCQLGWRGAGCD 918

Query:    74 VLLEQNCXXXXXXXXXXLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITA-- 131
               +E  C          L DC DP+CC    C ++ LCV +P P+DI+   Q  +  +  
Sbjct:   919 TSMETACSDGKDNDGDGLTDCMDPDCCLQASCHTTSLCVGSPDPLDIIQETQISSSLSTL 978

Query:   132 -SFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVS-TSTPLEGF 189
              SF++R+ FL+   S       + F+   + V+RG+VVTS G  LVGV +S  + P  G+
Sbjct:   979 QSFYQRIHFLVGRDSTHVIPGVNPFDGIHACVIRGQVVTSDGTPLVGVNISFINKPAYGY 1038

Query:   190 TLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMG-DDRPVS 248
             T+TR DG FDL+ NGG A+ L+F R+PF    H + +PW    ++DTI M+   +D P  
Sbjct:  1039 TITRQDGSFDLVSNGGVAIGLRFERAPFITQEHTLWLPWGRFFVMDTIVMRHEVNDIP-- 1096

Query:   249 TTQHACKDHDYDTMKPVVLATWKHGFQGACPDRSSILAESQFKQ 292
                 +C    +    P+VL      F G CP+R  ++ E Q  Q
Sbjct:  1097 ----SCDLSSFTRPMPIVLPAPLTAFAGTCPERGIVVPEIQTLQ 1136

GO:0016021 "integral to membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043005 "neuron projection" evidence=ISS

GO:0031643 "positive regulation of myelination" evidence=ISS

GO:0032289 "central nervous system myelin formation" evidence=ISS

GO:2000543 "positive regulation of gastrulation" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IEA;ISS

GO:0010976 "positive regulation of neuron projection development" evidence=ISS

GO:0007156 "homophilic cell adhesion" evidence=ISS

GO:0048714 "positive regulation of oligodendrocyte differentiation" evidence=ISS

GO:0046982 "protein heterodimerization activity" evidence=ISS

GO:0030154 "cell differentiation" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O61307	TENM_DROME	No assigned EC number	0.7892	0.6674	0.1021	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	418
KOG4659|consensus	1899		100.0
KOG1219|consensus	4289		99.4
KOG4289|consensus	2531		99.2
KOG1225|consensus	525		99.04
KOG4289|consensus	2531		98.93
KOG1225|consensus	525		98.92
KOG1226|consensus	783		98.53
KOG1219|consensus	4289		98.46
KOG1226|consensus	783		98.38
KOG1214|consensus	1289		98.2
KOG1217|consensus	487		97.65
KOG4260|consensus	350		97.64
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.35
KOG4260|consensus	350		97.35
KOG1217|consensus	487		97.34
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.31
KOG1214|consensus	1289		97.19
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.97
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.54
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.33
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.32
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	96.22
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	95.94
KOG1836|consensus	1705		95.9
smart00181	35	EGF Epidermal growth factor-like domain.	95.84
smart00051	63	DSL delta serrate ligand.	95.8
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.79
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.76
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.64
KOG0994|consensus	1758		95.24
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	94.56
KOG0994|consensus	1758		94.34
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	93.59
PF13715	88	DUF4480: Domain of unknown function (DUF4480)	93.35
cd00053	36	EGF Epidermal growth factor domain, found in epide	93.33
smart00181	35	EGF Epidermal growth factor-like domain.	91.91
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	91.87
smart00051	63	DSL delta serrate ligand.	90.71
PF13620	82	CarboxypepD_reg: Carboxypeptidase regulatory-like	90.48
KOG1836|consensus	1705		90.28
KOG3512|consensus	592		88.44
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	86.13
PHA02887	126	EGF-like protein; Provisional	84.16
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	83.79
PHA02887	126	EGF-like protein; Provisional	82.44
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	81.66
cd03521	95	Link_domain_KIAA0527_like Link_domain_KIAA0527_lik	81.66
KOG1218|consensus	316		81.52
KOG3607|consensus	716		81.23
PF04863	56	EGF_alliinase: Alliinase EGF-like domain; InterPro	80.79
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	80.32

>KOG4659|consensus

Probab=100.00  E-value=2.2e-55  Score=473.46  Aligned_cols=241  Identities=44%  Similarity=0.738  Sum_probs=220.9

Q ss_pred             ccCCCCCCceeecCCCCccccccceeeeeecCCceecccccCCCCCcccceeeceEEeecCCceeceEEEeeCCCCceEE
Q psy10559        112 VSAPKPIDILLRKQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVRVSTSTPLEGFTL  191 (418)
Q Consensus       112 ~~~~~~~~~~~C~C~~G~~g~~Ce~~~fli~~~s~~~~~~~~~~~~~~~~vi~G~v~~~~Gtp~~Gv~vs~~~~~~G~t~  191 (418)
                      ...+.|++.....|+ ++...|.++++|||.+.+++.|+....|++.+.+||+|+|++..|+|++||+||+...+.+||+
T Consensus         4 ~~a~~pi~vl~r~~p-~~~a~f~~r~~fli~e~s~q~y~~~~~fne~~~~vIrgrvv~~~~~pLVGVrVS~~~~~~yfTl   82 (1899)
T KOG4659|consen    4 STAASPIEVLMRMPP-IFNANFAQRVKFLIMEKSVQSYTDSSQFNENRISVIRGRVVWGGGVPLVGVRVSDAAHPLYFTL   82 (1899)
T ss_pred             CcccChHHHHhhcCC-ccchhHHHhhheeechhhhcccCchhhhccccceEEeccEeecCCcceEEEEeecccccceEEE
Confidence            333444444444444 4558999999999999999999999999999999999999999999999999999955555999


Q ss_pred             EecCCceeeeecCCceEEEEEecCCCCCccceeeeeccceEEeccEEEeecCCCCCCC-CCcccccCcCcccCceeeccc
Q psy10559        192 TRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQMGDDRPVST-TQHACKDHDYDTMKPVVLATW  270 (418)
Q Consensus       192 t~~dg~fdl~vNGG~~~~l~f~r~Pf~~~~~~V~vpwn~~~~id~v~m~~~~~~~~~~-~~~~C~~h~~~~~~pv~~~~~  270 (418)
                      ||+||+|||+||||.+++|+|.|+||.++.++||||||++++||+|+|++.+..++-. +.++|+.|.++.|.||++++|
T Consensus        83 TR~DG~FDL~vnGg~svtLqF~R~pF~~qkr~v~vpwnq~i~id~vvm~~~~~~~~~~~~~~~C~~~~~~~pdpvvissw  162 (1899)
T KOG4659|consen   83 TREDGYFDLTVNGGRSVTLQFLRTPFQSQKRSVFVPWNQIIHIDDVVMYRQEGGSPPAPARAKCSPTLRRIPDPVVISSW  162 (1899)
T ss_pred             EecCceEEEEEcccceEEEEEccCCCcccceeEEeChhhEEEEEeEEEEeecCCCCCCCCCCccChhhccCCCcEEecCc
Confidence            9999999999999999999999999999999999999999999999999988885432 468999999999999999999


Q ss_pred             cccccccCCCCCcccchhhhhhcccccccCceeeeeccchhhhcccceeeeecccceeeeeecCccccCCCCCcccCCCC
Q psy10559        271 KHGFQGACPDRSSILAESQFKQLGSKLAIMPTVLITSASIFYQIGRLWQVTLKGKGLVKLLRMGRKYLTPSSNISCASSN  350 (418)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (418)
                      +++|+++||++++|+||+|                                                             
T Consensus       163 ~~tf~ga~pdr~~Iv~esq-------------------------------------------------------------  181 (1899)
T KOG4659|consen  163 QYTFDGACPDRTSIVVESQ-------------------------------------------------------------  181 (1899)
T ss_pred             ccccCCcCCCCcccccchh-------------------------------------------------------------
Confidence            9999999999999999999                                                             


Q ss_pred             CCceeeeeeeeCCCceEEEEecCCCCCCceeEEEeeCCCCCCcccceEEeEEeecccee-EEeecCCC
Q psy10559        351 PPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVIPDTLQLRKSLCKDFTHTL-TFYEKRPT  417 (418)
Q Consensus       351 ~~~~~~e~~~i~gt~~~l~y~s~~~~gy~~~~~~~l~~~~ip~~l~~vh~~~~~~~~~~-~~~~~~~~  417 (418)
                         |+|||||||||++||+|+|||++||+|+|+|+||+++||.+|+||||+|++.+|.+ ++|+.||.
T Consensus       182 ---vi~Esl~ipgt~vrLvY~SsRs~gy~St~ki~lt~d~vp~~l~kVHl~i~ieG~lf~r~f~a~~n  246 (1899)
T KOG4659|consen  182 ---VIQESLPIPGTDVRLVYDSSRSPGYPSTMKIGLTYDRVPKELRKVHLNIRIEGRLFDRVFAARPN  246 (1899)
T ss_pred             ---hhhhhccCCCCceEEEEecccCCCcchheEEeecccccccceEEEEEEEEEeeEEeeeeccCCCC
Confidence               99999999999999999999999999999999999999999999999999999876 57888875

>KOG1219|consensus

Probab=99.40  E-value=2.9e-13  Score=154.05  Aligned_cols=105  Identities=27%  Similarity=0.643  Sum_probs=93.0

Q ss_pred             cCCC-cCCCCCcEEec-----ceEeeCCCCcCCCCCc--CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccc
Q psy10559          8 DVDL-LWCNEHGQCKN-----GTCLCVTGWNGKHCTL--EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQ   78 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~-----g~C~C~~G~~G~~Ce~--~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~   78 (418)
                      +.|. +||+++|+|..     |.|.|++-|.|.+||+  ..| ++||..+|+| ....++|.|.|+.||+|..|+...  
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtC-ip~~n~f~CnC~~gyTG~~Ce~~G-- 3941 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTC-IPFYNGFLCNCPNGYTGKRCEARG-- 3941 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEE-EecCCCeeEeCCCCccCceeeccc--
Confidence            6785 69999999974     6999999999999994  589 9999999999 555788999999999999999541  


Q ss_pred             cCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         79 NCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        79 ~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                                        .+.|+.++|.+++.|++.++   +|.|.|.+||.|..|..
T Consensus      3942 ------------------i~eCs~n~C~~gg~C~n~~g---sf~CncT~g~~gr~c~~ 3978 (4289)
T KOG1219|consen 3942 ------------------ISECSKNVCGTGGQCINIPG---SFHCNCTPGILGRTCCA 3978 (4289)
T ss_pred             ------------------ccccccccccCCceeeccCC---ceEeccChhHhcccCcc
Confidence                              36778899999999999999   89999999999999864

>KOG4289|consensus

Probab=99.20  E-value=1.1e-11  Score=137.41  Aligned_cols=107  Identities=23%  Similarity=0.611  Sum_probs=88.3

Q ss_pred             CCCc-CCCCCcEEec--------------------------ceEeeCCCCcCCCCC--cCCC-CCCCCCCcEEecCCCCC
Q psy10559          9 VDLL-WCNEHGQCKN--------------------------GTCLCVTGWNGKHCT--LEGC-PNSCSNHGQCRVNSDSQ   58 (418)
Q Consensus         9 ~C~~-pC~n~G~C~~--------------------------g~C~C~~G~~G~~Ce--~~~C-~~~C~~~G~C~~~~~g~   58 (418)
                      .|.+ ||.|.-+|..                          ..|.|++||+|..|+  ++.| .++|.+||+| ....|+
T Consensus      1181 iClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C-~srEgg 1259 (2531)
T KOG4289|consen 1181 ICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRC-RSREGG 1259 (2531)
T ss_pred             hhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhhcCCCCCCCce-EEecCc
Confidence            4765 8988888842                          279999999999997  7899 9999999999 666899


Q ss_pred             ceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCC-cccccccee
Q psy10559         59 WECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPA-ITASFFERM  137 (418)
Q Consensus        59 ~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G-~~g~~Ce~~  137 (418)
                      |.|.|.+||+|.+|++....             ..      |..+.|.|+++|++...  ..+.|.|+.| |++++|+-.
T Consensus      1260 YtCeCrpg~tGehCEvs~~a-------------gr------CvpGvC~nggtC~~~~n--ggf~c~Cp~ge~e~prC~v~ 1318 (2531)
T KOG4289|consen 1260 YTCECRPGFTGEHCEVSARA-------------GR------CVPGVCKNGGTCVNLLN--GGFCCHCPYGEFEDPRCEVT 1318 (2531)
T ss_pred             eeEEecCCccccceeeeccc-------------Cc------cccceecCCCEEeecCC--CceeccCCCcccCCCceEEE
Confidence            99999999999999987631             11      34567999999999865  4688999986 788888864

>KOG1225|consensus

Probab=99.04  E-value=4.1e-10  Score=118.43  Aligned_cols=109  Identities=34%  Similarity=0.755  Sum_probs=85.5

Q ss_pred             CCCcCCCCCcEEecceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc-cccCC-CCccC
Q psy10559          9 VDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL-EQNCN-DGKDN   86 (418)
Q Consensus         9 ~C~~pC~n~G~C~~g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~-~~~C~-~g~c~   86 (418)
                      .|+..|.++|.|++|+|+|++||+|..|.+..|+..|++|+.| .+  +  .|.|++||.|..|+..- ...|. +|.|.
T Consensus       251 ~C~~~c~~~g~c~~G~CIC~~Gf~G~dC~e~~Cp~~cs~~g~~-~~--g--~CiC~~g~~G~dCs~~~cpadC~g~G~Ci  325 (525)
T KOG1225|consen  251 YCPGGCTGRGQCVEGRCICPPGFTGDDCDELVCPVDCSGGGVC-VD--G--ECICNPGYSGKDCSIRRCPADCSGHGKCI  325 (525)
T ss_pred             cCCCCCcccceEeCCeEeCCCCCcCCCCCcccCCcccCCCcee-cC--C--EeecCCCccccccccccCCccCCCCCccc
Confidence            5778899999999999999999999999988898889999998 33  2  89999999999998665 35564 56666


Q ss_pred             CCCCccccCCC----CCCCCCCCCCCCccccCCCCCCceeecCCCCccccc
Q psy10559         87 DKDGLVDCEDP----ECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASF  133 (418)
Q Consensus        87 ~~~G~~~C~dp----dCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~  133 (418)
                        +|.+.|..-    .|..+. |.+++.|++.        |+|..||.|+.
T Consensus       326 --~G~C~C~~Gy~G~~C~~~~-C~~~g~cv~g--------C~C~~Gw~G~d  365 (525)
T KOG1225|consen  326 --DGECLCDEGYTGELCIQRA-CSGGGQCVNG--------CKCKKGWRGPD  365 (525)
T ss_pred             --CCceEeCCCCcCCcccccc-cCCCceeccC--------ceeccCccCCC
Confidence              555556432    444443 8888877652        68899998866

>KOG4289|consensus

Probab=98.93  E-value=1.1e-08  Score=114.38  Aligned_cols=71  Identities=32%  Similarity=0.830  Sum_probs=60.3

Q ss_pred             cccCC-CcCCCCCcEEec----ceEeeCCCCcCCCCCcC----CC-CCCCCCCcEEecCCCCCceEEcCCC-CCCCCCCc
Q psy10559          6 NIDVD-LLWCNEHGQCKN----GTCLCVTGWNGKHCTLE----GC-PNSCSNHGQCRVNSDSQWECKCSDG-WDGKDCSV   74 (418)
Q Consensus         6 ~id~C-~~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~----~C-~~~C~~~G~C~~~~~g~~~C~C~~G-~~G~~C~~   74 (418)
                      .+|.| ..||.|||+|..    |+|+|.+||+|++||++    .| +..|.|+|+|.....|++.|.|+.| |.++.|+.
T Consensus      1238 eiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~nggf~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1238 EIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLLNGGFCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             hhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccCccccceecCCCEEeecCCCceeccCCCcccCCCceEE
Confidence            37788 469999999974    79999999999999964    68 9999999999555578899999987 77888976


Q ss_pred             cc
Q psy10559         75 LL   76 (418)
Q Consensus        75 ~~   76 (418)
                      ..
T Consensus      1318 ~t 1319 (2531)
T KOG4289|consen 1318 TT 1319 (2531)
T ss_pred             Ee
Confidence            53

>KOG1225|consensus

Probab=98.92  E-value=1.9e-09  Score=113.36  Aligned_cols=69  Identities=39%  Similarity=1.022  Sum_probs=61.3

Q ss_pred             CCccccc----CCCcCCCCCcEEecceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559          2 RGFSNID----VDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus         2 ~Gf~~id----~C~~pC~n~G~C~~g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .||++.|    .|+..|++|+.|.++.|+|++||.|+.|++..|+..|++||.| .    ...|.|.+||+|..|+..
T Consensus       271 ~Gf~G~dC~e~~Cp~~cs~~g~~~~g~CiC~~g~~G~dCs~~~cpadC~g~G~C-i----~G~C~C~~Gy~G~~C~~~  343 (525)
T KOG1225|consen  271 PGFTGDDCDELVCPVDCSGGGVCVDGECICNPGYSGKDCSIRRCPADCSGHGKC-I----DGECLCDEGYTGELCIQR  343 (525)
T ss_pred             CCCcCCCCCcccCCcccCCCceecCCEeecCCCccccccccccCCccCCCCCcc-c----CCceEeCCCCcCCccccc
Confidence            4677543    4888899999999999999999999999998999999999999 4    248999999999999976

>KOG1226|consensus

Probab=98.53  E-value=1.6e-07  Score=101.18  Aligned_cols=96  Identities=31%  Similarity=0.808  Sum_probs=71.5

Q ss_pred             CCCCCcEEecceEeeCCCCc----CCCCCcC--CCC----CCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCC
Q psy10559         13 WCNEHGQCKNGTCLCVTGWN----GKHCTLE--GCP----NSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCND   82 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~----G~~Ce~~--~C~----~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~   82 (418)
                      +|+++|.|.-|+|+|++...    |..||.+  .|+    ..|.+||+|..+     +|+|.+||+|..|+-...     
T Consensus       515 vCSgrG~C~CGqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC~g~G~C~CG-----~CvC~~GwtG~~C~C~~s-----  584 (783)
T KOG1226|consen  515 VCSGRGDCVCGQCVCHKPDNGKIYGKFCECDNFSCERHKGVLCGGHGRCECG-----RCVCNPGWTGSACNCPLS-----  584 (783)
T ss_pred             CcCCCCcEeCCceEecCCCCCceeeeeeeccCcccccccCcccCCCCeEeCC-----cEEcCCCCccCCCCCCCC-----
Confidence            79999999999999999988    9999855  453    349999999544     899999999999985431     


Q ss_pred             CccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCC-ccccccce
Q psy10559         83 GKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPA-ITASFFER  136 (418)
Q Consensus        83 g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G-~~g~~Ce~  136 (418)
                              ...|..++   ...|...|.|...       .|+|... |.|.+||.
T Consensus       585 --------td~C~~~~---G~iCSGrG~C~Cg-------~C~C~~~~~sG~~CE~  621 (783)
T KOG1226|consen  585 --------TDTCESSD---GQICSGRGTCECG-------RCKCTDPPYSGEFCEK  621 (783)
T ss_pred             --------CccccCCC---CceeCCCceeeCC-------ceEcCCCCcCcchhhc
Confidence                    12233332   2346677777664       3667654 88988886

>KOG1219|consensus

Probab=98.46  E-value=2.1e-07  Score=107.78  Aligned_cols=75  Identities=25%  Similarity=0.615  Sum_probs=65.4

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCC
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKP  117 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~  117 (418)
                      +.| .++|+++|.|.-...++|.|.|++-|.|..|+..+                     +-|..++|.+|++|...++ 
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~---------------------epC~snPC~~GgtCip~~n- 3922 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDL---------------------EPCASNPCLTGGTCIPFYN- 3922 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCccccccc---------------------ccccCCCCCCCCEEEecCC-
Confidence            568 88999999995444688999999999999999766                     3467889999999999888 


Q ss_pred             CCceeecCCCCcccccccee
Q psy10559        118 IDILLRKQPPAITASFFERM  137 (418)
Q Consensus       118 ~~~~~C~C~~G~~g~~Ce~~  137 (418)
                        .|.|.|+.||+|.+||.-
T Consensus      3923 --~f~CnC~~gyTG~~Ce~~ 3940 (4289)
T KOG1219|consen 3923 --GFLCNCPNGYTGKRCEAR 3940 (4289)
T ss_pred             --CeeEeCCCCccCceeecc
Confidence              789999999999999863

>KOG1226|consensus

Probab=98.38  E-value=5e-07  Score=97.33  Aligned_cols=95  Identities=28%  Similarity=0.626  Sum_probs=71.8

Q ss_pred             CCCCCcEEecceEeeCCCCcCCCCCc-----------CCC----C-CCCCCCcEEecCCCCCceEEcCCCCC----CCCC
Q psy10559         13 WCNEHGQCKNGTCLCVTGWNGKHCTL-----------EGC----P-NSCSNHGQCRVNSDSQWECKCSDGWD----GKDC   72 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~G~~Ce~-----------~~C----~-~~C~~~G~C~~~~~g~~~C~C~~G~~----G~~C   72 (418)
                      .|+.+|++.-|.|.|.+||.|..|+-           +.|    . -.|+++|.|..+     +|.|.+...    |..|
T Consensus       468 ~C~g~G~~~CG~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG-----qC~C~~~~~~~i~G~fC  542 (783)
T KOG1226|consen  468 LCHGNGTFVCGQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG-----QCVCHKPDNGKIYGKFC  542 (783)
T ss_pred             ccCCCCcEEecceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC-----ceEecCCCCCceeeeee
Confidence            69999999999999999999999982           346    1 269999999544     899998877    8888


Q ss_pred             CccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         73 SVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +-+.               +.|...+   .-.|.+++.|...       +|.|.+||+|+.|+-.
T Consensus       543 ECDn---------------fsC~r~~---g~lC~g~G~C~CG-------~CvC~~GwtG~~C~C~  582 (783)
T KOG1226|consen  543 ECDN---------------FSCERHK---GVLCGGHGRCECG-------RCVCNPGWTGSACNCP  582 (783)
T ss_pred             eccC---------------ccccccc---CcccCCCCeEeCC-------cEEcCCCCccCCCCCC
Confidence            7322               2222211   2348888888763       5899999999999863

>KOG1214|consensus

Probab=98.20  E-value=2.9e-06  Score=91.75  Aligned_cols=106  Identities=24%  Similarity=0.588  Sum_probs=78.4

Q ss_pred             cccCCC---cCCCCCcEEec----ceEeeCCCCc--C--CCCC-------cCCC---CCCCCCCcEE--ecCCCCCceEE
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLCVTGWN--G--KHCT-------LEGC---PNSCSNHGQC--RVNSDSQWECK   62 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C~~G~~--G--~~Ce-------~~~C---~~~C~~~G~C--~~~~~g~~~C~   62 (418)
                      ++++|.   ..|..+..|++    ++|+|..||.  +  ..|-       .+.|   ...|.-.|+|  .....+.|.|.
T Consensus       733 d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~  812 (1289)
T KOG1214|consen  733 DENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCA  812 (1289)
T ss_pred             ChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEe
Confidence            455664   47999999986    6888888774  4  4564       2356   2457655544  33346779999


Q ss_pred             cCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccc
Q psy10559         63 CSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFF  134 (418)
Q Consensus        63 C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~C  134 (418)
                      |.+||.|+.                    ..|.+.|.|..+.|...+.|.+.++   ++.|+|.+||.|.-.
T Consensus       813 CLPGfsGDG--------------------~~c~dvDeC~psrChp~A~Cyntpg---sfsC~C~pGy~GDGf  861 (1289)
T KOG1214|consen  813 CLPGFSGDG--------------------HQCTDVDECSPSRCHPAATCYNTPG---SFSCRCQPGYYGDGF  861 (1289)
T ss_pred             ecCCccCCc--------------------cccccccccCccccCCCceEecCCC---cceeecccCccCCCc
Confidence            999999832                    4456678888889999999999997   899999999988543

>KOG1217|consensus

Probab=97.65  E-value=0.00014  Score=74.69  Aligned_cols=116  Identities=28%  Similarity=0.700  Sum_probs=83.5

Q ss_pred             CCCcEEe-------cceEeeCCCCcCCCCCc--CCC---CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc-------
Q psy10559         15 NEHGQCK-------NGTCLCVTGWNGKHCTL--EGC---PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL-------   75 (418)
Q Consensus        15 ~n~G~C~-------~g~C~C~~G~~G~~Ce~--~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~-------   75 (418)
                      ..++.|.       .+.|.|..||.|..|..  +.|   ...|.+++.| .+..+.|.|.|.+||.|..|+..       
T Consensus       137 ~~~~~c~~~~~~~~~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C-~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~  215 (487)
T KOG1217|consen  137 CIDGSCSNGPGSVGPFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTC-VNTGGSYLCSCPPGYTGSTCETTGNGGTCV  215 (487)
T ss_pred             eCchhhcCCCCCCCceeeeeCCCcccccccccccccccCCCCcCCCccc-ccCCCCeeEeCCCCccCCcCcCCCCCceEe
Confidence            4556665       25799999999999984  478   3459999999 67677799999999999988764       


Q ss_pred             ------------cc------ccCCC--CccCCCCCccccC--------------CCCCCCCC-CCCCCCccccCCCCCCc
Q psy10559         76 ------------LE------QNCND--GKDNDKDGLVDCE--------------DPECCSNH-ICRSSQLCVSAPKPIDI  120 (418)
Q Consensus        76 ------------~~------~~C~~--g~c~~~~G~~~C~--------------dpdCc~~~-~C~~~~~C~~~~~~~~~  120 (418)
                                  ..      ..|..  +.|.+..+.+.|.              +.+-|... .|.+++.|.+..+   .
T Consensus       216 ~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~---~  292 (487)
T KOG1217|consen  216 DSVACSCPPGARGPECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPG---S  292 (487)
T ss_pred             cceeccCCCCCCCCCcccccccccCCCCcccccCCceeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCC---c
Confidence                        10      01211  4555555554443              33434443 3888999999877   4


Q ss_pred             eeecCCCCcccccc
Q psy10559        121 LLRKQPPAITASFF  134 (418)
Q Consensus       121 ~~C~C~~G~~g~~C  134 (418)
                      |.|.|++||+|..|
T Consensus       293 ~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  293 YRCTCPPGFTGRLC  306 (487)
T ss_pred             ceeeCCCCCCCCCC
Confidence            88999999999887

>KOG4260|consensus

Probab=97.64  E-value=5.4e-05  Score=73.14  Aligned_cols=111  Identities=25%  Similarity=0.646  Sum_probs=66.3

Q ss_pred             cCCCCCcEEec-------ceEeeCCCCcCCCCCc-----------------CCCCCCCCCCcEEecCCCCCceEE-cCCC
Q psy10559         12 LWCNEHGQCKN-------GTCLCVTGWNGKHCTL-----------------EGCPNSCSNHGQCRVNSDSQWECK-CSDG   66 (418)
Q Consensus        12 ~pC~n~G~C~~-------g~C~C~~G~~G~~Ce~-----------------~~C~~~C~~~G~C~~~~~g~~~C~-C~~G   66 (418)
                      .+|.++|.|..       |.|.|.+||+|+.|..                 ..|...|.  |.| .. .+.-.|. |..|
T Consensus       150 r~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~--~~C-sg-~~~k~C~kCkkG  225 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCL--GVC-SG-ESSKGCSKCKKG  225 (350)
T ss_pred             CCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhh--ccc-CC-CCCCChhhhccc
Confidence            48999999962       7999999999999962                 12334454  366 22 3344575 9999


Q ss_pred             CCCC--CCCccc-----cccCC-CCccCCCCCccccCC-------CCCCCC--CCCC-CCCccccCCCCCCceeecCCCC
Q psy10559         67 WDGK--DCSVLL-----EQNCN-DGKDNDKDGLVDCED-------PECCSN--HICR-SSQLCVSAPKPIDILLRKQPPA  128 (418)
Q Consensus        67 ~~G~--~C~~~~-----~~~C~-~g~c~~~~G~~~C~d-------pdCc~~--~~C~-~~~~C~~~~~~~~~~~C~C~~G  128 (418)
                      |.-.  .|-...     +.+|. +..|.|..|++.|.+       +|.|..  ..|. .+..|.+..+   .|.|.|..|
T Consensus       226 W~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g~d~C~~~~d~~~~kn~~c~ni~~---~~r~v~f~~  302 (350)
T KOG4260|consen  226 WKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKGVDECQFCADVCASKNRPCMNIDG---QYRCVCFSG  302 (350)
T ss_pred             ceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccCChHHhhhhhhhcccCCCCcccCCc---cEEEEeccc
Confidence            9633  232111     13343 456777777777776       444432  2232 3455666555   566666655


Q ss_pred             c
Q psy10559        129 I  129 (418)
Q Consensus       129 ~  129 (418)
                      +
T Consensus       303 ~  303 (350)
T KOG4260|consen  303 L  303 (350)
T ss_pred             c
Confidence            4

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.35  E-value=0.0002  Score=47.64  Aligned_cols=24  Identities=42%  Similarity=1.239  Sum_probs=16.0

Q ss_pred             CCCCCcEEe--cceEeeCCCCcCCCC
Q psy10559         13 WCNEHGQCK--NGTCLCVTGWNGKHC   36 (418)
Q Consensus        13 pC~n~G~C~--~g~C~C~~G~~G~~C   36 (418)
                      .|++||+|+  .++|+|.+||+|+.|
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCCC
Confidence            466677776  467777777776665

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG4260|consensus

Probab=97.35  E-value=0.00024  Score=68.82  Aligned_cols=100  Identities=23%  Similarity=0.516  Sum_probs=71.3

Q ss_pred             eCCCCcCCCCCcCCC----CCCCCCCcEEecCC--CCCceEEcCCCCCCCCCCcccc--------------cc----CC-
Q psy10559         27 CVTGWNGKHCTLEGC----PNSCSNHGQCRVNS--DSQWECKCSDGWDGKDCSVLLE--------------QN----CN-   81 (418)
Q Consensus        27 C~~G~~G~~Ce~~~C----~~~C~~~G~C~~~~--~g~~~C~C~~G~~G~~C~~~~~--------------~~----C~-   81 (418)
                      |+.|-.|+.|..  |    ..+|.++|.|.-+.  .|++.|.|..||+|+.|..-..              ..    |. 
T Consensus       132 Cp~gtyGpdCl~--Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~  209 (350)
T KOG4260|consen  132 CPDGTYGPDCLQ--CPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLG  209 (350)
T ss_pred             cCCCCcCCcccc--CCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhc
Confidence            899999999963  5    45799999994332  5778999999999999864431              11    21 


Q ss_pred             ---C------CccCCCCC--ccccCCCCCCC--CCCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559         82 ---D------GKDNDKDG--LVDCEDPECCS--NHICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        82 ---~------g~c~~~~G--~~~C~dpdCc~--~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                         .      ..|..++-  .-.|.|.++|.  .++|..+..|+|..+   +|.|.+.+||.+
T Consensus       210 ~Csg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteG---Sf~C~dk~Gy~~  269 (350)
T KOG4260|consen  210 VCSGESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEG---SFKCEDKEGYKK  269 (350)
T ss_pred             ccCCCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeecCCC---ceEecccccccC
Confidence               1      12222222  23467777764  566999999999988   899999999866

>KOG1217|consensus

Probab=97.34  E-value=0.00074  Score=69.38  Aligned_cols=103  Identities=29%  Similarity=0.676  Sum_probs=71.0

Q ss_pred             cEEec----ceEeeCCCCcCCCC----CcCCC-CC-CCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCC
Q psy10559         18 GQCKN----GTCLCVTGWNGKHC----TLEGC-PN-SCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDND   87 (418)
Q Consensus        18 G~C~~----g~C~C~~G~~G~~C----e~~~C-~~-~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~   87 (418)
                      ++|.+    ++|.|.+||.+..+    .++.| .. .|.++++| .+..+.|.|.|++||.|..| ..    |.+     
T Consensus       243 ~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C-~~~~~~~~C~C~~g~~g~~~-~~----~~~-----  311 (487)
T KOG1217|consen  243 GTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTC-VNVPGSYRCTCPPGFTGRLC-TE----CVD-----  311 (487)
T ss_pred             CcccccCCceeeeCCCCccccccceeeeccccCCCCccCCCCee-ecCCCcceeeCCCCCCCCCC-cc----ccc-----
Confidence            78875    59999999999985    46788 43 39999999 66667799999999999998 11    100     


Q ss_pred             CCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         88 KDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        88 ~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                         ...|...  .....|.+++.|.. .+....+.|.|.++|.|..|+..
T Consensus       312 ---~~~C~~~--~~~~~c~~g~~C~~-~~~~~~~~C~c~~~~~g~~C~~~  355 (487)
T KOG1217|consen  312 ---VDECSPR--NAGGPCANGGTCNT-LGSFGGFRCACGPGFTGRRCEDS  355 (487)
T ss_pred             ---ccccccc--ccCCcCCCCccccc-CCCCCCCCcCCCCCCCCCccccC
Confidence               0011000  02344777778822 22234677999999999988864

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.31  E-value=0.0001  Score=48.92  Aligned_cols=28  Identities=36%  Similarity=1.036  Sum_probs=20.6

Q ss_pred             CCCCCCCcEEecCCC-CCceEEcCCCCCCC
Q psy10559         42 PNSCSNHGQCRVNSD-SQWECKCSDGWDGK   70 (418)
Q Consensus        42 ~~~C~~~G~C~~~~~-g~~~C~C~~G~~G~   70 (418)
                      +++|.++|+| ++.. +.|.|.|++||+|+
T Consensus         3 ~~~C~n~g~C-~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    3 SNPCQNGGTC-IDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTSSTTTEEE-EEESTSEEEEEEBTTEEST
T ss_pred             CCcCCCCeEE-EeCCCCCEEeECCCCCccC
Confidence            5678888888 4444 77888888888875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG1214|consensus

Probab=97.19  E-value=0.0015  Score=71.47  Aligned_cols=47  Identities=30%  Similarity=1.029  Sum_probs=41.7

Q ss_pred             ceEeeCCCCcCC--CC-CcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559         23 GTCLCVTGWNGK--HC-TLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus        23 g~C~C~~G~~G~--~C-e~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      ++|.|.+||.|+  .| ..++| ++-|...++| .+..|++.|.|.+||.|+
T Consensus       809 y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~C-yntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  809 YSCACLPGFSGDGHQCTDVDECSPSRCHPAATC-YNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             EEEeecCCccCCccccccccccCccccCCCceE-ecCCCcceeecccCccCC
Confidence            699999999975  44 47899 9999999999 788999999999999875

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.97  E-value=0.0011  Score=44.77  Aligned_cols=34  Identities=38%  Similarity=1.164  Sum_probs=25.9

Q ss_pred             CCC-C-CCCCCCcEEecCCCCCceEEcCCCCC-CCCCC
Q psy10559         39 EGC-P-NSCSNHGQCRVNSDSQWECKCSDGWD-GKDCS   73 (418)
Q Consensus        39 ~~C-~-~~C~~~G~C~~~~~g~~~C~C~~G~~-G~~C~   73 (418)
                      ++| . .+|.++|.| .+..++|.|.|+.||. |..|+
T Consensus         3 ~~C~~~~~C~~~~~C-~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        3 DECASGNPCQNGGTC-VNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             ccCcCCCCcCCCCEe-ECCCCCeEeECCCCCccCCcCC
Confidence            456 3 578888888 6777888888888888 77764

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.54  E-value=0.0035  Score=41.63  Aligned_cols=34  Identities=38%  Similarity=1.154  Sum_probs=25.2

Q ss_pred             CCC-C-CCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         39 EGC-P-NSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        39 ~~C-~-~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      ++| . .+|.+++.| .+..+.|.|.|..||.|..|+
T Consensus         3 ~~C~~~~~C~~~~~C-~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           3 DECASGNPCQNGGTC-VNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             ccCCCCCCcCCCCEe-ECCCCCeEeECCCCCcCCcCC
Confidence            456 3 578778888 566777888888888887663

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.33  E-value=0.0046  Score=41.65  Aligned_cols=32  Identities=34%  Similarity=0.790  Sum_probs=27.0

Q ss_pred             cccCCC--cCCCCCcEEec----ceEeeCCCCc-CCCCC
Q psy10559          6 NIDVDL--LWCNEHGQCKN----GTCLCVTGWN-GKHCT   37 (418)
Q Consensus         6 ~id~C~--~pC~n~G~C~~----g~C~C~~G~~-G~~Ce   37 (418)
                      ++++|.  .+|.++|+|.+    +.|.|.+||. |..|+
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            367886  58999999986    5899999999 98885

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.32  E-value=0.0017  Score=43.05  Aligned_cols=30  Identities=23%  Similarity=0.442  Sum_probs=25.7

Q ss_pred             CCCCCCCCCccccCCCCCCceeecCCCCcccc
Q psy10559        101 SNHICRSSQLCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       101 ~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                      ...+|.++++|+...  .+.|.|.|++||+|.
T Consensus         2 ~~~~C~n~g~C~~~~--~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    2 SSNPCQNGGTCIDLP--GGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTTSSTTTEEEEEES--TSEEEEEEBTTEEST
T ss_pred             CCCcCCCCeEEEeCC--CCCEEeECCCCCccC
Confidence            456899999999988  348999999999984

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.22  E-value=0.0055  Score=40.75  Aligned_cols=27  Identities=48%  Similarity=1.160  Sum_probs=22.1

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      ..|++||+| ...  ...|.|.+||+|+.|
T Consensus         6 ~~C~~~G~C-~~~--~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTC-VSP--CGRCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEE-eCC--CCEEECCCCCcCCCC
Confidence            359999999 432  459999999999887

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=95.94  E-value=0.0045  Score=43.44  Aligned_cols=30  Identities=33%  Similarity=1.226  Sum_probs=25.9

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      +++|   +..|..++.| ++..|+|.|.|++||.
T Consensus         2 idEC~~~~~~C~~~~~C-~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTC-VNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSTTTTTSSSSSTTSEE-EEETTEEEEEESTTEE
T ss_pred             ccccCCCCCcCCCCCEE-EcCCCCEEeeCCCCcE
Confidence            4677   4579889999 8889999999999997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1836|consensus

Probab=95.90  E-value=0.014  Score=69.89  Aligned_cols=110  Identities=27%  Similarity=0.578  Sum_probs=75.5

Q ss_pred             CCCCcEEec--ceEeeCCCCcCCCCCc-------------C--CC-CCCCCCC-cEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         14 CNEHGQCKN--GTCLCVTGWNGKHCTL-------------E--GC-PNSCSNH-GQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        14 C~n~G~C~~--g~C~C~~G~~G~~Ce~-------------~--~C-~~~C~~~-G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +...+.+.+  ..|.|+.||+|..|+.             +  .| +..|++| ..|+   ..++.|.|...-.|..|+ 
T Consensus       684 ~~~~~~~~~wve~c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd---~~tG~C~C~~~t~G~~C~-  759 (1705)
T KOG1836|consen  684 GDGAGATDTWVEQCTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICD---PRTGQCKCKHNTFGGQCA-  759 (1705)
T ss_pred             CCCCCCccchhhhccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCcccccc---CCCCceecccCCCCCchh-
Confidence            444455533  4699999999999982             1  23 5567776 6784   345689999999999997 


Q ss_pred             cccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeec-CCCCccccccce
Q psy10559         75 LLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK-QPPAITASFFER  136 (418)
Q Consensus        75 ~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~-C~~G~~g~~Ce~  136 (418)
                          .|.+|.-++-+....   .| |...+|.+++.|..... .....|+ |++||+|.+|+.
T Consensus       760 ----~C~~GfYg~~~~~~~---~d-C~~C~Cp~~~~~~~~~~-~~~~iCk~Cp~gytG~rCe~  813 (1705)
T KOG1836|consen  760 ----QCVDGFYGLPDLGTS---GD-CQPCPCPNGGACGQTPE-ILEVVCKNCPPGYTGLRCEE  813 (1705)
T ss_pred             ----hhcCCCCCccccCCC---CC-CccCCCCCChhhcCcCc-ccceecCCCCCCCccccccc
Confidence                466665543322111   12 45567778888887765 4456788 999999999985

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.84  E-value=0.013  Score=38.75  Aligned_cols=28  Identities=39%  Similarity=1.132  Sum_probs=22.8

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCC-CCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDG-KDC   72 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G-~~C   72 (418)
                      .+|.++ .| .+..+.|.|.|+.||.| ..|
T Consensus         6 ~~C~~~-~C-~~~~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        6 GPCSNG-TC-INTPGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCCC-EE-ECCCCCeEeECCCCCccCCcc
Confidence            478877 89 56688899999999999 665

>smart00051 DSL delta serrate ligand

Probab=95.80  E-value=0.011  Score=45.50  Aligned_cols=44  Identities=25%  Similarity=0.634  Sum_probs=34.8

Q ss_pred             eEeeCCCCcCCCCCcCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559         24 TCLCVTGWNGKHCTLEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus        24 ~C~C~~G~~G~~Ce~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      .-.|.++|.|..|+. .|  .+.+.+|.+|+ .   .+.|.|.+||+|+.|
T Consensus        18 rv~C~~~~yG~~C~~-~C~~~~d~~~~~~Cd-~---~G~~~C~~Gw~G~~C   63 (63)
T smart00051       18 RVTCDENYYGEGCNK-FCRPRDDFFGHYTCD-E---NGNKGCLEGWMGPYC   63 (63)
T ss_pred             EeeCCCCCcCCccCC-EeCcCccccCCccCC-c---CCCEecCCCCcCCCC
Confidence            456999999999973 45  45678899993 2   357999999999887

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.79  E-value=0.0051  Score=32.69  Aligned_cols=13  Identities=54%  Similarity=1.592  Sum_probs=7.6

Q ss_pred             eEeeCCCCcCCCC
Q psy10559         24 TCLCVTGWNGKHC   36 (418)
Q Consensus        24 ~C~C~~G~~G~~C   36 (418)
                      .|+|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            3666666666665

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.76  E-value=0.012  Score=38.94  Aligned_cols=31  Identities=35%  Similarity=0.800  Sum_probs=26.2

Q ss_pred             ccCCC--cCCCCCcEEec----ceEeeCCCCcCCCCC
Q psy10559          7 IDVDL--LWCNEHGQCKN----GTCLCVTGWNGKHCT   37 (418)
Q Consensus         7 id~C~--~pC~n~G~C~~----g~C~C~~G~~G~~Ce   37 (418)
                      +++|.  .+|.+++.|.+    +.|.|.+||.|..|+
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            57786  48999999986    589999999998874

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.64  E-value=0.016  Score=37.64  Aligned_cols=29  Identities=45%  Similarity=1.174  Sum_probs=22.6

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCC-CC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGK-DC   72 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~-~C   72 (418)
                      .+|.+++.| .+..+.|.|.|+.||.|. .|
T Consensus         6 ~~C~~~~~C-~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           6 NPCSNGGTC-VNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCEE-ecCCCCeEeECCCCCcccCCc
Confidence            567778888 566678889999998887 54

>KOG0994|consensus

Probab=95.24  E-value=0.043  Score=62.28  Aligned_cols=88  Identities=27%  Similarity=0.747  Sum_probs=50.8

Q ss_pred             CCcccccCCCc-CCCCCc-EEec--ceEe-eCCCCcCCCCCc--------------CCC-CCCCCCCc--------EEec
Q psy10559          2 RGFSNIDVDLL-WCNEHG-QCKN--GTCL-CVTGWNGKHCTL--------------EGC-PNSCSNHG--------QCRV   53 (418)
Q Consensus         2 ~Gf~~id~C~~-pC~n~G-~C~~--g~C~-C~~G~~G~~Ce~--------------~~C-~~~C~~~G--------~C~~   53 (418)
                      -||++.-+|.. .|+.|. +|..  |.|. |..--+|.+|+.              ..| |.+|..+-        .|..
T Consensus       848 pG~WgFPeCr~CqCNgHA~~Cd~~tGaCi~CqD~T~G~~CdrCl~GyyGdP~lg~g~~CrPCpCP~gp~Sg~~~A~sC~~  927 (1758)
T KOG0994|consen  848 PGYWGFPECRPCQCNGHADTCDPITGACIDCQDSTTGHSCDRCLDGYYGDPRLGSGIGCRPCPCPDGPASGRQHADSCYL  927 (1758)
T ss_pred             CCccCCCcCccccccCcccccCccccccccccccccccchhhhhccccCCcccCCCCCCCCCCCCCCCccchhccccccc
Confidence            47888777754 676663 3432  4443 444444555541              256 66675431        4644


Q ss_pred             CC-CCCceEEcCCCCCCCCCCccccccCCCCccCCCCCcccc
Q psy10559         54 NS-DSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDC   94 (418)
Q Consensus        54 ~~-~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C   94 (418)
                      +. .....|.|.+||+|..|+.     |.++.-.+-..+..|
T Consensus       928 d~~t~~ivC~C~~GY~G~RCe~-----CA~~~fGnP~~GGtC  964 (1758)
T KOG0994|consen  928 DTRTQQIVCHCQEGYSGSRCEI-----CADNHFGNPSEGGTC  964 (1758)
T ss_pred             cccccceeeecccCccccchhh-----hcccccCCcccCCcc
Confidence            43 3455799999999999984     555544443333344

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=94.56  E-value=0.016  Score=30.82  Aligned_cols=13  Identities=46%  Similarity=1.653  Sum_probs=10.8

Q ss_pred             eEEcCCCCCCCCC
Q psy10559         60 ECKCSDGWDGKDC   72 (418)
Q Consensus        60 ~C~C~~G~~G~~C   72 (418)
                      .|.|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            4999999999987

>KOG0994|consensus

Probab=94.34  E-value=0.052  Score=61.65  Aligned_cols=49  Identities=37%  Similarity=0.998  Sum_probs=34.2

Q ss_pred             ceEeeCCCCcCCCCCc-----------CCC-CCCCC--CCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         23 GTCLCVTGWNGKHCTL-----------EGC-PNSCS--NHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        23 g~C~C~~G~~G~~Ce~-----------~~C-~~~C~--~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      |+|-|.+.-.|..|+.           .+| +..|.  +.-+|. .  =.++|.|.+||-|..|+.
T Consensus      1037 GQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~~pqCN-~--ftGQCqCkpGfGGR~C~q 1099 (1758)
T KOG0994|consen 1037 GQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIGGPQCN-E--FTGQCQCKPGFGGRTCSQ 1099 (1758)
T ss_pred             CcCCCCcccccccccccccchhccccCCCCCccCCCccCCcccc-c--cccceeccCCCCCcchhH
Confidence            8999999988988862           245 44454  233662 2  234899999999999973

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=93.59  E-value=0.041  Score=38.50  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=22.7

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAIT  130 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~  130 (418)
                      ..|..++.|++..+   +|.|.|++||.
T Consensus        10 ~~C~~~~~C~N~~G---sy~C~C~~Gy~   34 (42)
T PF07645_consen   10 HNCPENGTCVNTEG---SYSCSCPPGYE   34 (42)
T ss_dssp             SSSSTTSEEEEETT---EEEEEESTTEE
T ss_pred             CcCCCCCEEEcCCC---CEEeeCCCCcE
Confidence            45988999999999   99999999996

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF13715 DUF4480: Domain of unknown function (DUF4480)

Probab=93.35  E-value=0.56  Score=37.40  Aligned_cols=79  Identities=23%  Similarity=0.309  Sum_probs=58.7

Q ss_pred             eeceEEeec-CCceeceEEEeeCCCCceEEEecCCceeeeecCCceEEEEEecCCCCCccceeeeeccceEEeccEEEee
Q psy10559        163 VRGRVVTSM-GMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTITMQM  241 (418)
Q Consensus       163 i~G~v~~~~-Gtp~~Gv~vs~~~~~~G~t~t~~dg~fdl~vNGG~~~~l~f~r~Pf~~~~~~V~vpwn~~~~id~v~m~~  241 (418)
                      ++|.|++.. +.|+.++.+...... -++.|..+|.|.+-+.-|. .++.|.-..|......+-...++...+ ++.|.+
T Consensus         2 i~G~V~d~~t~~pl~~a~V~~~~~~-~~~~Td~~G~F~i~~~~g~-~~l~is~~Gy~~~~~~i~~~~~~~~~~-~i~L~~   78 (88)
T PF13715_consen    2 ISGKVVDSDTGEPLPGATVYLKNTK-KGTVTDENGRFSIKLPEGD-YTLKISYIGYETKTITISVNSNKNTNL-NIYLEP   78 (88)
T ss_pred             EEEEEEECCCCCCccCeEEEEeCCc-ceEEECCCeEEEEEEcCCC-eEEEEEEeCEEEEEEEEEecCCCEEEE-EEEEee
Confidence            579999888 999999999887543 5689999999998765443 667777778888777777766554444 677765


Q ss_pred             cCC
Q psy10559        242 GDD  244 (418)
Q Consensus       242 ~~~  244 (418)
                      ...
T Consensus        79 ~~~   81 (88)
T PF13715_consen   79 KSN   81 (88)
T ss_pred             Ccc
Confidence            443

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=93.33  E-value=0.088  Score=34.03  Aligned_cols=30  Identities=23%  Similarity=0.416  Sum_probs=24.5

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCcccc-cc
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITAS-FF  134 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~-~C  134 (418)
                      ..+|.+++.|.+..+   .+.|.|+.||.|. .|
T Consensus         5 ~~~C~~~~~C~~~~~---~~~C~C~~g~~g~~~C   35 (36)
T cd00053           5 SNPCSNGGTCVNTPG---SYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCEEecCCC---CeEeECCCCCcccCCc
Confidence            456888899998875   7899999999986 44

>smart00181 EGF Epidermal growth factor-like domain

Probab=91.91  E-value=0.17  Score=33.26  Aligned_cols=28  Identities=21%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCccc-ccc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITA-SFF  134 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g-~~C  134 (418)
                      .+|.++ .|.+..+   .|.|.|++||.| ..|
T Consensus         6 ~~C~~~-~C~~~~~---~~~C~C~~g~~g~~~C   34 (35)
T smart00181        6 GPCSNG-TCINTPG---SYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCCC-EEECCCC---CeEeECCCCCccCCcc
Confidence            468877 8988755   899999999998 554

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=91.87  E-value=0.082  Score=36.05  Aligned_cols=27  Identities=26%  Similarity=0.955  Sum_probs=20.1

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      ..|..++.| .+..++|.|.|.+||.|+
T Consensus         6 ~~C~~nA~C-~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    6 GGCHPNATC-TNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GGS-TTCEE-EE-TTSEEEEE-CEEECC
T ss_pred             CCCCCCcEe-ecCCCCEEeECCCCCccC
Confidence            358889999 677789999999999875

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00051 DSL delta serrate ligand

Probab=90.71  E-value=0.34  Score=37.24  Aligned_cols=47  Identities=11%  Similarity=0.301  Sum_probs=30.7

Q ss_pred             ceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccc
Q psy10559         59 WECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFF  134 (418)
Q Consensus        59 ~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~C  134 (418)
                      +.-.|.++|.|..|+..                  |.     ....+..+..|... +     .|.|.+||+|+.|
T Consensus        17 ~rv~C~~~~yG~~C~~~------------------C~-----~~~d~~~~~~Cd~~-G-----~~~C~~Gw~G~~C   63 (63)
T smart00051       17 IRVTCDENYYGEGCNKF------------------CR-----PRDDFFGHYTCDEN-G-----NKGCLEGWMGPYC   63 (63)
T ss_pred             EEeeCCCCCcCCccCCE------------------eC-----cCccccCCccCCcC-C-----CEecCCCCcCCCC
Confidence            35579999999999732                  21     12234556666442 3     3789999999765

>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A

Probab=90.48  E-value=1.5  Score=34.27  Aligned_cols=75  Identities=24%  Similarity=0.362  Sum_probs=48.0

Q ss_pred             eeceEEeecCCceeceEEEeeCCCC---ceEEEecCCceeee-ecCCceEEEEEecCCCCCccc-eeeeeccceEEeccE
Q psy10559        163 VRGRVVTSMGMGLVGVRVSTSTPLE---GFTLTRDDGWFDLL-VNGGGAVTLQFGRSPFKPHNH-IVHVPWNEVVIIDTI  237 (418)
Q Consensus       163 i~G~v~~~~Gtp~~Gv~vs~~~~~~---G~t~t~~dg~fdl~-vNGG~~~~l~f~r~Pf~~~~~-~V~vpwn~~~~id~v  237 (418)
                      ++|+|.+..|.|+.|+.|.......   ..+.+..+|.|.+- +-- +.-.+.+....|.+... .|-+..++...+ ++
T Consensus         2 I~G~V~d~~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~~l~~-g~Y~l~v~~~g~~~~~~~~v~v~~~~~~~~-~i   79 (82)
T PF13620_consen    2 ISGTVTDATGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFEGLPP-GTYTLRVSAPGYQPQTQENVTVTAGQTTTV-DI   79 (82)
T ss_dssp             EEEEEEETTSCBHTT-EEEET--TTTECCEEE--TTSEEEEEEE-S-EEEEEEEEBTTEE-EEEEEEEESSSSEEE---E
T ss_pred             EEEEEEcCCCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEEccCC-EeEEEEEEECCcceEEEEEEEEeCCCEEEE-EE
Confidence            6799999999999999999884322   66788889999774 333 45666677777777664 466666666554 44


Q ss_pred             EE
Q psy10559        238 TM  239 (418)
Q Consensus       238 ~m  239 (418)
                      .|
T Consensus        80 ~L   81 (82)
T PF13620_consen   80 TL   81 (82)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>KOG1836|consensus

Probab=90.28  E-value=0.94  Score=54.84  Aligned_cols=71  Identities=34%  Similarity=0.806  Sum_probs=49.7

Q ss_pred             CCCCC-cEEec--ceEeeCCCCcCCCCCc--------------CCC-CCCCCCCcEEecCC-CCCceEE-cCCCCCCCCC
Q psy10559         13 WCNEH-GQCKN--GTCLCVTGWNGKHCTL--------------EGC-PNSCSNHGQCRVNS-DSQWECK-CSDGWDGKDC   72 (418)
Q Consensus        13 pC~n~-G~C~~--g~C~C~~G~~G~~Ce~--------------~~C-~~~C~~~G~C~~~~-~g~~~C~-C~~G~~G~~C   72 (418)
                      .|++| .+|..  |.|.|..--.|.+|+.              ..| +.+|.+.+.|.... .....|. |++||+|..|
T Consensus       732 ~cngh~~~Cd~~tG~C~C~~~t~G~~C~~C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rC  811 (1705)
T KOG1836|consen  732 DCNGHSNICDPRTGQCKCKHNTFGGQCAQCVDGFYGLPDLGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRC  811 (1705)
T ss_pred             ccCCccccccCCCCceecccCCCCCchhhhcCCCCCccccCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCccccc
Confidence            45554 45653  7777777777777752              138 88899888884332 4667899 9999999999


Q ss_pred             CccccccCCCCccCCC
Q psy10559         73 SVLLEQNCNDGKDNDK   88 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~   88 (418)
                      +     .|.+|+-.+.
T Consensus       812 e-----~c~dgyfg~p  822 (1705)
T KOG1836|consen  812 E-----ECADGYFGNP  822 (1705)
T ss_pred             c-----cCCCccccCC
Confidence            8     4666655543

>KOG3512|consensus

Probab=88.44  E-value=1.4  Score=46.22  Aligned_cols=102  Identities=24%  Similarity=0.511  Sum_probs=59.3

Q ss_pred             ceEeeCCCCcCCCCCc------------------CCC-CCCCCCCcE-EecCC--------CCCceEE-cCCCCCCCCCC
Q psy10559         23 GTCLCVTGWNGKHCTL------------------EGC-PNSCSNHGQ-CRVNS--------DSQWECK-CSDGWDGKDCS   73 (418)
Q Consensus        23 g~C~C~~G~~G~~Ce~------------------~~C-~~~C~~~G~-C~~~~--------~g~~~C~-C~~G~~G~~C~   73 (418)
                      .+|.|..+-+|+.|+.                  ++| .+.|..|+. |..+.        ..+..|. |.-.-.|..|.
T Consensus       295 ltCdC~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~SggvClnCrHnTaGrhCh  374 (592)
T KOG3512|consen  295 LTCDCEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCH  374 (592)
T ss_pred             eEEecccCCCCCCcccccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCccccceEeecccCCCCcccc
Confidence            4899999999999872                  366 667776653 42221        1223453 66666777774


Q ss_pred             ccccccCCCCccCCCCCc----cccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         74 VLLEQNCNDGKDNDKDGL----VDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        74 ~~~~~~C~~g~c~~~~G~----~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                           -|..|+-.|..-.    -.|.  .|-++..=..+-+|....+     +|.|.+|.+|..|++
T Consensus       375 -----yCreGyyRd~s~pl~hrkaCk--~CdChpVGs~gktCNq~tG-----qCpCkeGvtG~tCnr  429 (592)
T KOG3512|consen  375 -----YCREGYYRDGSKPLTHRKACK--ACDCHPVGSAGKTCNQTTG-----QCPCKEGVTGLTCNR  429 (592)
T ss_pred             -----cccCccccCCCCCCchhhhhh--hcCCcccccccccccccCC-----cccCCCCCccccccc
Confidence                 4555554443211    1122  2222333344556665555     688888888888775

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=86.13  E-value=0.34  Score=32.99  Aligned_cols=27  Identities=11%  Similarity=0.204  Sum_probs=21.0

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcccc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                      ..|..++.|.+.++   .+.|.|.+||.|.
T Consensus         6 ~~C~~nA~C~~~~~---~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    6 GGCHPNATCTNTGG---SYTCTCKPGYEGD   32 (36)
T ss_dssp             GGS-TTCEEEE-TT---SEEEEE-CEEECC
T ss_pred             CCCCCCcEeecCCC---CEEeECCCCCccC
Confidence            45889999999988   8999999999884

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PHA02887 EGF-like protein; Provisional

Probab=84.16  E-value=0.99  Score=38.83  Aligned_cols=31  Identities=26%  Similarity=0.667  Sum_probs=23.2

Q ss_pred             CCCCCCcEEecC-CCCCceEEcCCCCCCCCCCc
Q psy10559         43 NSCSNHGQCRVN-SDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        43 ~~C~~~G~C~~~-~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +.|- ||+|..- ......|.|+.||+|..|+.
T Consensus        92 ~YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887         92 DFCI-NGECMNIIDLDEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             CEee-CCEEEccccCCCceeECCCCcccCCCCc
Confidence            4577 6899432 24567899999999999984

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=83.79  E-value=0.28  Score=37.68  Aligned_cols=45  Identities=29%  Similarity=0.718  Sum_probs=24.2

Q ss_pred             ceEeeCCCCcCCCCCcCCC-CC-CCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559         23 GTCLCVTGWNGKHCTLEGC-PN-SCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus        23 g~C~C~~G~~G~~Ce~~~C-~~-~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      ..-.|.+.|-|+.|.. -| +. .-.+|-+|+  .  .+.-.|.+||+|+.|
T Consensus        17 ~rv~C~~nyyG~~C~~-~C~~~~d~~ghy~Cd--~--~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   17 IRVVCDENYYGPNCSK-FCKPRDDSFGHYTCD--S--NGNKVCLPGWTGPNC   63 (63)
T ss_dssp             ------TTEETTTT-E-E---EEETTEEEEE---S--S--EEE-TTEESTTS
T ss_pred             EEEECCCCCCCccccC-CcCCCcCCcCCcccC--C--CCCCCCCCCCcCCCC
Confidence            4678999999999974 35 32 235677883  2  346789999999987

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>PHA02887 EGF-like protein; Provisional

Probab=82.44  E-value=0.84  Score=39.27  Aligned_cols=33  Identities=12%  Similarity=0.173  Sum_probs=26.6

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +.|. +|.|....+ .+...|.|+.||+|.+|+.+
T Consensus        92 ~YCi-HG~C~yI~d-L~epsCrC~~GYtG~RCE~v  124 (126)
T PHA02887         92 DFCI-NGECMNIID-LDEKFCICNKGYTGIRCDEV  124 (126)
T ss_pred             CEee-CCEEEcccc-CCCceeECCCCcccCCCCcc
Confidence            4577 468988776 55678999999999999975

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=81.66  E-value=1  Score=39.43  Aligned_cols=36  Identities=17%  Similarity=0.257  Sum_probs=29.0

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCccccccceeee
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKF  139 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~~f  139 (418)
                      .+.|.+| .|...++ .+.+.|.|..||+|.+||....
T Consensus        50 ~~YClHG-~C~yI~d-l~~~~CrC~~GYtGeRCEh~dL   85 (139)
T PHA03099         50 DGYCLHG-DCIHARD-IDGMYCRCSHGYTGIRCQHVVL   85 (139)
T ss_pred             CCEeECC-EEEeecc-CCCceeECCCCcccccccceee
Confidence            4558876 7988776 5677899999999999998643

>cd03521 Link_domain_KIAA0527_like Link_domain_KIAA0527_like; this domain is found in the human protein KIAA0527

Probab=81.66  E-value=0.32  Score=40.00  Aligned_cols=23  Identities=17%  Similarity=0.294  Sum_probs=19.3

Q ss_pred             eccccccc---cccCCCCCcccchhh
Q psy10559        267 LATWKHGF---QGACPDRSSILAESQ  289 (418)
Q Consensus       267 ~~~~~~~~---~~~~~~~~~~~~~~q  289 (418)
                      .+.|+++|   ..+|.++||.||+..
T Consensus         9 ~G~y~l~f~eA~~AC~~~gA~lAs~~   34 (95)
T cd03521           9 NGSQGLGLRAARQSCASLGARLASAA   34 (95)
T ss_pred             CCccccCHHHHHHHHHHcCCEeccHH
Confidence            46789999   578999999999754

Sequence-wise, it is highly similar to the link domain. The link domain is a hyaluronan-binding (HA) domain. KIAA0527 contains a single link module. The KIAA0527 gene was originally cloned from human brain tissue.

>KOG1218|consensus

Probab=81.52  E-value=6.8  Score=38.40  Aligned_cols=31  Identities=42%  Similarity=1.074  Sum_probs=16.6

Q ss_pred             ecceEeeCCCCcCCCCCcC--CC--CCCCCCCcEE
Q psy10559         21 KNGTCLCVTGWNGKHCTLE--GC--PNSCSNHGQC   51 (418)
Q Consensus        21 ~~g~C~C~~G~~G~~Ce~~--~C--~~~C~~~G~C   51 (418)
                      .++.|.|.+||.|.+|...  .|  ...|.+++.|
T Consensus       160 ~~~~c~c~~g~~g~~~~~~~~~c~~~~~~~~g~~C  194 (316)
T KOG1218|consen  160 KNGICTCQPGFVGVFCVESCSGCSPLTACENGAKC  194 (316)
T ss_pred             CCCceeccCCcccccccccCCCcCCCcccCCCCee
Confidence            3456666666666666532  14  2344554566

>KOG3607|consensus

Probab=81.23  E-value=1.4  Score=49.29  Aligned_cols=55  Identities=29%  Similarity=0.791  Sum_probs=37.1

Q ss_pred             CCCCCcEEecceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559         13 WCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .|..+-.|.+.+|.=.. ..+..    .|+..|++||.|    ++...|.|.+||.++.|+...
T Consensus       605 ~Cg~~~vC~~~~C~~~~-v~~~~----~~~~~C~g~GVC----nn~~~ChC~~gwapp~C~~~~  659 (716)
T KOG3607|consen  605 SCGPGMICINHRCLSAS-VLNSS----CCPTTCNGHGVC----NNELNCHCEPGWAPPFCFIFG  659 (716)
T ss_pred             ccCCCceecCCcchhhh-hhccc----ccccccCCCccc----CCCcceeeCCCCCCCcccccc
Confidence            35555556666554222 22222    356779999999    345689999999999999654

>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=80.79  E-value=0.9  Score=33.85  Aligned_cols=33  Identities=39%  Similarity=0.904  Sum_probs=15.8

Q ss_pred             CCCCCcEEecCC---CCCceEEcCCCCCCCCCCccc
Q psy10559         44 SCSNHGQCRVNS---DSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        44 ~C~~~G~C~~~~---~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .|++||+.-++.   .|...|.|..-|.|++|+..+
T Consensus        18 ~CSGHGr~flDg~~~dG~p~CECn~Cy~GpdCS~~~   53 (56)
T PF04863_consen   18 SCSGHGRAFLDGLIADGSPVCECNSCYGGPDCSTLI   53 (56)
T ss_dssp             --TTSEE--TTS-EETTEE--EE-TTEESTTS-EE-
T ss_pred             CcCCCCeeeeccccccCCccccccCCcCCCCcccCC
Confidence            577777764332   344567777777887777655

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=80.32  E-value=1.3  Score=38.71  Aligned_cols=32  Identities=28%  Similarity=0.756  Sum_probs=19.4

Q ss_pred             CCCCCcEEec-CCCCCceEEcCCCCCCCCCCccc
Q psy10559         44 SCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        44 ~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .|.+ |.|.. .....+.|.|..||+|.+|+...
T Consensus        52 YClH-G~C~yI~dl~~~~CrC~~GYtGeRCEh~d   84 (139)
T PHA03099         52 YCLH-GDCIHARDIDGMYCRCSHGYTGIRCQHVV   84 (139)
T ss_pred             EeEC-CEEEeeccCCCceeECCCCccccccccee
Confidence            3553 46632 12355678888888888887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	418
2ygq_A	324	Wif Domain-Epidermal Growth Factor (Egf)-Like Domai		5e-04

>pdb|2YGQ|A Chain A, Wif Domain-Epidermal Growth Factor (Egf)-Like Domains 1-3 Of Human Wnt Inhibitory Factor 1 In Complex With 1,2-Dipalmitoylphosphatidylcholine Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 3   GFSNIDVDLLWCN----EHGQC-KNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDS 57
           GF  ++ D   C+      G C   G C+C  G  G+ C +  CP  C N G+C   S  
Sbjct: 204 GFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKS-- 261
Query: 58  QWECKCSDGWDGKDCS 73
             +CKCS G+ G  CS
Sbjct: 262 --KCKCSKGYQGDLCS 275

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	418
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	5e-16
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	8e-11
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	2e-10
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	7e-06
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	7e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-14
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-13
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-13
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	5e-13
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-04
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	2e-13
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	6e-10
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	6e-05
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-12
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-05
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	1e-10
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	9e-07
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-10
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	8e-08
2vh0_B	134	Activated factor XA light chain; serine protease,	2e-10
2vh0_B	134	Activated factor XA light chain; serine protease,	3e-08
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	5e-10
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	2e-09
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-08
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-05
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-04
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	7e-10
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	1e-04
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-09
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-08
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	3e-08
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	3e-08
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	3e-08
2uvo_A	171	Agglutinin isolectin 1; carbohydrate-binding prote	6e-08
2uvo_A	171	Agglutinin isolectin 1; carbohydrate-binding prote	3e-06
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	9e-07
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	2e-05
3g5c_A	510	ADAM 22; alpha/beta fold, cross-linked domain, cel	1e-06
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	2e-06
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	2e-04
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	7e-06
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-05
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	4e-05
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	4e-05
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	2e-04
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-04
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	3e-04
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	6e-04
3eto_A	242	Neurogenic locus notch homolog protein 1; alpha-be	6e-04

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 79.4 bits (195), Expect = 5e-16
 Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 16/93 (17%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C    +C      C     G       C   C +  +         +     G D  +C+
Sbjct: 608 CTFKKEC----VECKKFDRGALHDENTCNRYCRDEIES-------VKELKDTGKDAVNCT 656

Query: 74  VLLEQNCNDG-----KDNDKDGLVDCEDPECCS 101
              E +C          + K  L   E+PECC 
Sbjct: 657 YKNEDDCVVRFQYYEDSSGKSILYVVEEPECCK 689

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 62.8 bits (152), Expect = 8e-11
 Identities = 28/116 (24%), Positives = 39/116 (33%), Gaps = 23/116 (19%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNS--------CSNHGQCRVNSDSQWECKCSD 65
           C+ HGQC  G CLC + W G +C      ++        CS  G+C         C C  
Sbjct: 536 CSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG-----SCVCIQ 590

Query: 66  -GWDGKDCSVLLE--QNCNDGKD----NDKDGLVDCEDPEC---CSNHICRSSQLC 111
            G  G  C         C   K+       D     ++  C   C + I    +L 
Sbjct: 591 PGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELK 646

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 20/100 (20%), Positives = 26/100 (26%), Gaps = 19/100 (19%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQW----------ECKC 63
            N +G  + G C C  GW G  C         S   +C                  +C C
Sbjct: 449 NNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVC 508

Query: 64  SDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH 103
                GK       + C     +           E CS H
Sbjct: 509 HSSDFGKIT----GKYCECDDFS-----CVRYKGEMCSGH 539

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 47.4 bits (112), Expect = 7e-06
 Identities = 19/104 (18%), Positives = 28/104 (26%), Gaps = 26/104 (25%)

Query: 13  WCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
              ++ +C + +C+                  CS HGQC        +C C   W G  C
Sbjct: 516 ITGKYCECDDFSCVRY------------KGEMCSGHGQCSCG-----DCLCDSDWTGYYC 558

Query: 73  SVLLEQNCNDGKDNDKDGLV-----DCEDPECCSNHICRSSQLC 111
                           +GL+      CE   C           C
Sbjct: 559 ----NCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTC 598

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 13/105 (12%)

Query: 8   DVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSD---------SQ 58
            ++        + +    +   G+             C+   Q   NS            
Sbjct: 398 SIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFEC 457

Query: 59  WECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH 103
             C+C  GW G  C    E +  D + + +D     E    CS  
Sbjct: 458 GVCRCGPGWLGSQC----ECSEEDYRPSQQDECSPREGQPVCSQR 498

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 20/91 (21%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
           C   G+C     C C  G+ G  C+   C   C  HG C        +C+C +GW G+ C
Sbjct: 251 CRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCH----EPNKCQCQEGWHGRHC 306

Query: 73  SVLLEQNCNDGKDNDKDGLVDCEDPECCSNH 103
                +                       +H
Sbjct: 307 ----NKRYE-----------ASLIGTKHHHH 322

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 70.3 bits (172), Expect = 1e-13
 Identities = 25/101 (24%), Positives = 33/101 (32%), Gaps = 25/101 (24%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
           C   G C   G C+C  G+ G +C    C  +C N G C        +C C  G +G+ C
Sbjct: 187 CMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC-FYPG---KCICPPGLEGEQC 242

Query: 73  SVLLEQNCNDGKDNDKDGLVDCEDPECCSNH-ICRSSQLCV 112
            +                   C  P  C N   C     C 
Sbjct: 243 EIS-----------------KCPQP--CRNGGKCIGKSKCK 264

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 69.1 bits (169), Expect = 3e-13
 Identities = 26/114 (22%), Positives = 34/114 (29%), Gaps = 22/114 (19%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
            N  G               K C    CP  C N G C    + +  C+C DG+ G  C 
Sbjct: 126 MNSEGNT--ILKTPQNAIFFKTCQQAECPGGCRNGGFC----NERRICECPDGFHGPHCE 179

Query: 74  VLLEQN--CNDGKDNDKD---------GLVDCEDPEC---CSNH-ICRSSQLCV 112
             L      N G               G+ +C+   C   C N   C     C+
Sbjct: 180 KALCTPRCMNGGLCVTPGFCICPPGFYGV-NCDKANCSTTCFNGGTCFYPGKCI 232

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 68.3 bits (167), Expect = 5e-13
 Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 25/101 (24%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
           C   G C   G C+C  G  G+ C +  CP  C N G+C +       CKCS G+ G  C
Sbjct: 219 CFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKC-IGKSK---CKCSKGYQGDLC 274

Query: 73  SVLLEQNCNDGKDNDKDGLVDCEDPECCSNH-ICRSSQLCV 112
                +               CE    C  H  C     C 
Sbjct: 275 ----SKPV-------------CEPG--CGAHGTCHEPNKCQ 296

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 4/41 (9%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTL---EGCPNSCSNHGQ 50
           C  HG C     C C  GW+G+HC          +  +H  
Sbjct: 283 CGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIGTKHHHHH 323

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 15/114 (13%), Positives = 27/114 (23%), Gaps = 22/114 (19%)

Query: 13  WCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
                         C+   +G     E      ++ G               +    K C
Sbjct: 95  TVPHKASVVQVGFPCLGKQDG-VAAFEVDVIVMNSEGNT-------ILKTPQNAIFFKTC 146

Query: 73  SVLL-EQNCNDGKDNDKDGL---------VDCEDPEC---CSNH-ICRSSQLCV 112
                   C +G   ++  +           CE   C   C N  +C +   C+
Sbjct: 147 QQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCI 200

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 14  CNEHGQCKNG-TCLCVTGWNGKHCTLE----GCPNSCSNHGQCRVNSDSQWECKCSDGWD 68
              HG C     CLC T W G+ C  +    G    C N G C      +++C C +G+ 
Sbjct: 104 GCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYS 163

Query: 69  GKDCSV 74
           G +C +
Sbjct: 164 GPNCEI 169

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 57.0 bits (138), Expect = 6e-10
 Identities = 20/117 (17%), Positives = 29/117 (24%), Gaps = 18/117 (15%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
            + HG  +      C   + G  C     P             D      C +GW G +C
Sbjct: 7   HHHHGSIEGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYAC---DQNGNKTCMEGWMGPEC 63

Query: 73  SVLL-EQNC--NDGKDNDKDGLV-----------DCEDPECCSNHICRSSQLCVSAP 115
           +  +  Q C    G                     C     C + IC     C+   
Sbjct: 64  NRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLCET 120

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 13/88 (14%), Positives = 23/88 (26%), Gaps = 20/88 (22%)

Query: 41  CPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQN--CNDGKDNDKDGLVDCED-- 96
             +   +HG      + +    C D + G  C+               D++G   C +  
Sbjct: 3   GSHHHHHHGSI----EGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGW 58

Query: 97  -----------PECCSNH-ICRSSQLCV 112
                        C   H  C+    C 
Sbjct: 59  MGPECNRAICRQGCSPKHGSCKLPGDCR 86

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTLEG--CPNSCSNHGQCRVNSDSQWECKCSDGW 67
           C   G CK+      C C  G+ GK+C L+      +      C+  +DS+  C C+ G+
Sbjct: 56  CLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY 115

Query: 68  DGKDCSVLLEQNCND 82
                    +++C  
Sbjct: 116 RLAPD----QKSCKP 126

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 30/102 (29%)

Query: 18  GQCKNGTC----------LCVTGWNGKHCTLEGC---PNSCSNHGQCRVNSDSQWECKCS 64
            +C    C                      ++G    PN C N G C  +  + +EC C 
Sbjct: 16  RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLC-KDDINSYECWCQ 74

Query: 65  DGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICR 106
            G++GK+C    E +              C          C+
Sbjct: 75  VGFEGKNC----ELD------------ATCNIKNGRCKQFCK 100

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 23/113 (20%)

Query: 14  CNEHGQC--KNGTCLCVTGWNGKHCTL--------EGCPNSCSNHGQCR---VNSDSQWE 60
           C  +G C    G C+C  G+ G+ C            C   CS    C+         + 
Sbjct: 205 CMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYG 264

Query: 61  CKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH-ICRSSQLCV 112
           C C+ GW G  C     + C+ G         DC+    C+N  +C   Q C+
Sbjct: 265 CSCATGWKGLQC----NEACHPGFYGP-----DCKLRCSCNNGEMCDRFQGCL 308

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 49.7 bits (118), Expect = 9e-07
 Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 7/66 (10%)

Query: 14  CNEHGQCKN-GTCLCVTGWNGKHCTLEG----CPNSCSNHGQCRVNSDSQWECKC-SDGW 67
           CN    C     CLC  GW G  C  EG     P          VNS   +   C + GW
Sbjct: 295 CNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGK-FNPICKASGW 353

Query: 68  DGKDCS 73
                 
Sbjct: 354 PLPTNE 359

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 24/121 (19%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTL---EGC-PNSCSNHGQCRVNSDSQWECKCSD 65
           C   G+CK+G    TC C+ G+ GK+C L   + C  ++      C     +   C C+ 
Sbjct: 50  CQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFC-HEEQNSVVCSCAR 108

Query: 66  GWDGKDCSVLLEQNCND---------GKDNDKDGLVDCEDP--ECCSNHICRSSQLCVSA 114
           G+   D      + C             +  K  +        E   +   +        
Sbjct: 109 GYTLADN----GKACIPTGPYPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLD 164

Query: 115 P 115
           P
Sbjct: 165 P 165

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 51.3 bits (123), Expect = 8e-08
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 24/99 (24%)

Query: 17  HGQCKNGTCLCVTGWNGKHCTLEG--C-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           + + +             +   +G  C  + C N G+C  +   ++ C C +G++GK+C 
Sbjct: 19  YEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKC-KDGLGEYTCTCLEGFEGKNC- 76

Query: 74  VLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCV 112
                              +    + CS       Q C 
Sbjct: 77  -------------------ELFTRKLCSLDNGDCDQFCH 96

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 24/101 (23%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTL---EGC-PNSCSNHGQCRVNSDSQWECKCSD 65
           C   G+CK+G    TC C+ G+ GK+C L   + C  ++      C     +   C C+ 
Sbjct: 50  CQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFC-HEEQNSVVCSCAR 108

Query: 66  GWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICR 106
           G+   D      + C                  C    + R
Sbjct: 109 GYTLADN----GKACI-----------PTGPYPCGKQTLER 134

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 19/106 (17%), Positives = 31/106 (29%), Gaps = 28/106 (26%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTLEG--C-PNSCSNHGQCRVNSDSQWECKCSDG 66
           C E                      +   +G  C  + C N G+C  +   ++ C C +G
Sbjct: 12  CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKC-KDGLGEYTCTCLEG 70

Query: 67  WDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCV 112
           ++GK+C    E                    + CS       Q C 
Sbjct: 71  FEGKNC----ELFTR----------------KLCSLDNGDCDQFCH 96

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 60.5 bits (146), Expect = 5e-10
 Identities = 23/124 (18%), Positives = 31/124 (25%), Gaps = 34/124 (27%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCP--------NSCSNHGQCRVNSDSQWECKCSD 65
               G C  G C C  G+ G  C  E             CS  G+CR N      C+C  
Sbjct: 529 GPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN-----VCECHS 583

Query: 66  GWDGKDCSVLLE--------------QNCNDGKDNDKDGLVDCED--PECCSNHICRSSQ 109
           G+    C                        G         +C    P    ++     +
Sbjct: 584 GYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGK-----NCSAACPGLQLSNNPVKGR 638

Query: 110 LCVS 113
            C  
Sbjct: 639 TCKE 642

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 58.6 bits (141), Expect = 2e-09
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 18/98 (18%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCP-----NSCSNHGQCRVNSDSQWECKCSDGWD 68
           C ++  C         G  GK+C+   CP     N+      C+     +    C   + 
Sbjct: 600 CGKYISCAE-CLKFEKGPFGKNCS-AACPGLQLSNNPVKGRTCKE----RDSEGCWVAYT 653

Query: 69  GKDCSVLLEQNCNDGKDNDKDGLVDC-EDPECCSNHIC 105
            +        +      ++     +C   P+ C  ++ 
Sbjct: 654 LEQQD---GMDRYLIYVDESR---ECVAGPDGCGENLY 685

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 55.9 bits (134), Expect = 1e-08
 Identities = 22/138 (15%), Positives = 32/138 (23%), Gaps = 44/138 (31%)

Query: 13  WCNEHGQCKNGTCLCVTGWNGKHCTLEGCPNS----------------CSNHGQCRVNSD 56
            C+  G  + G C C TG+ GK+C  +    S                CS  G C     
Sbjct: 436 LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-- 493

Query: 57  SQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLV-----------------------D 93
              +C C                C+       +G V                        
Sbjct: 494 ---QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSA 550

Query: 94  CEDPECCSNHICRSSQLC 111
           C+        +      C
Sbjct: 551 CQCERTTEGCLNPRRVEC 568

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 17/99 (17%), Positives = 25/99 (25%), Gaps = 17/99 (17%)

Query: 13  WCNEHGQC--KNGTCLCVTGWNGKHCTLEG-----CPNSCSNHGQCRVNSDSQWECKCSD 65
              E        G    VT      C           + C   G           C+C  
Sbjct: 398 CIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECG-----ICRCDT 452

Query: 66  GWDGKDCSVLLEQNCNDGKDNDKDGLVDCE-DPECCSNH 103
           G+ GK+C    E         + +G    + +   CS  
Sbjct: 453 GYIGKNC----ECQTQGRSSQELEGSCRKDNNSIICSGL 487

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 31/114 (27%)

Query: 14  CNEHGQCKNGTCLCVTG-------------WNGKHCT--------LEGCPNSCSNHGQCR 52
            + +    +G   CV G               G++C           G        G C 
Sbjct: 477 KDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF 536

Query: 53  VNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICR 106
                  +C+C  G++G  C     +   +G  N +    +C     C  ++C 
Sbjct: 537 CG-----KCRCHPGFEGSACQ---CERTTEGCLNPRRV--ECSGRGRCRCNVCE 580

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 56.2 bits (136), Expect = 7e-10
 Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 25/102 (24%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTL---EGCPNSCSNHG---QCRVNSDSQWECKC 63
           C   G CK+      C C+  + G++C     +       N G    C  ++ ++  C+C
Sbjct: 55  CQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRC 114

Query: 64  SDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHIC 105
            +G+           +C               +  C    I 
Sbjct: 115 HEGYSLLAD----GVSCT-----------PTVEYPCGKIPIL 141

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 18/78 (23%)

Query: 18 GQCKNGTCL----------CVTGWNGKHCTLEG---CPNSCSNHGQCRVNSDSQWECKCS 64
           +CK   C                       +G     + C N G C  +    + C C 
Sbjct: 15 RECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSC-KDQLQSYICFCL 73

Query: 65 DGWDGKDCSVLLEQNCND 82
            ++G++C    E + +D
Sbjct: 74 PAFEGRNC----ETHKDD 87

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 12/77 (15%)

Query: 14 CNEHGQCKNG----TCLCVTGWNGKHCTLEGCPNSC-SNHGQCR---VNSDSQWECKCSD 65
          C  HG C +G    +C C +GW G+ C  E    +C  ++G C    +       C C+ 
Sbjct: 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAP 81

Query: 66 GWDGKDCSVLLEQNCND 82
          G+   D        C+ 
Sbjct: 82 GYKLGDD----LLQCHP 94

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 18/81 (22%)

Query: 29  TGWNGKHCTL----EGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGK 84
              +G  C +      C + C  HG C ++    + C C  GW+G+ C    ++  +   
Sbjct: 2   KHVDGDQCLVLPLEHPCASLCCGHGTC-IDGIGSFSCDCRSGWEGRFC----QREVSF-- 54

Query: 85  DNDKDGLVDCEDPECCSNHIC 105
                  ++C        H C
Sbjct: 55  -------LNCSLDNGGCTHYC 68

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)

Query: 14 CNEHGQCKNG----TCLCVTGWNGKHCTLE--GC-PNSCSNHGQCRVNSDSQWECKCSDG 66
          C   G+C N      C C+ G+ G  C ++   C  N C N   C ++   +++C C  G
Sbjct: 15 CEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATC-LDQIGEFQCICMPG 73

Query: 67 WDGKDCSV 74
          ++G  C V
Sbjct: 74 YEGVHCEV 81

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTLEG--C-PNSCSNHGQCRVNSDSQWECKCSDG 66
           C     C +      C+C+ G+ G HC +    C  + C ++G+C ++  ++++C+C  G
Sbjct: 53  CQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRC-LDKINEFQCECPTG 111

Query: 67  WDGKDCSV 74
           + G  C V
Sbjct: 112 FTGHLCQV 119

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 22/111 (19%), Positives = 30/111 (27%), Gaps = 22/111 (19%)

Query: 13  WCNEHGQCKNGTCLCVTGWNGKHC----------------TLEGCPNSCSNHGQCRVNSD 56
            C+  G  + G C C TG+ GK+C                  +     CS  G C     
Sbjct: 97  LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-- 154

Query: 57  SQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPEC-CSNHICR 106
              +C C                C+       +G V        C    CR
Sbjct: 155 ---QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCR 202

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 16/74 (21%), Positives = 21/74 (28%), Gaps = 19/74 (25%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHC--------------TLEGCPNSCSNHGQCRVNSDSQW 59
           C+  G C  G CLC T                        G        G C        
Sbjct: 145 CSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----- 199

Query: 60  ECKCSDGWDGKDCS 73
           +C+C  G++G  C 
Sbjct: 200 KCRCHPGFEGSACQ 213

>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171

 Score = 51.2 bits (122), Expect = 6e-08
 Identities = 23/92 (25%), Positives = 30/92 (32%), Gaps = 4/92 (4%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVN-SDSQW-ECKCSDGWDGKD 71
           C+++G C  G   C  G  G  C  +    S +    C  N   SQW  C     + G  
Sbjct: 61  CSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGG 120

Query: 72  CSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH 103
           C         D       G   C +  CCS  
Sbjct: 121 CQ--SGACSTDKPCGKDAGGRVCTNNYCCSKW 150

>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 23/102 (22%), Positives = 29/102 (28%), Gaps = 24/102 (23%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNS------------CSNHGQCRVNSDSQWEC 61
           C+++G C  G   C  G     C       S            CS +G C          
Sbjct: 18  CSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFG-----AE 72

Query: 62  KCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH 103
            C  G  G  C         D K   + G   C +  CCS  
Sbjct: 73  YCGAGCQGGPCR-------ADIKCGSQAGGKLCPNNLCCSQW 107

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 47.0 bits (112), Expect = 9e-07
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 24  TCLCVTGWNGKHCTLE--GC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNC 80
            C C  G+NG HC      C    C N G C  +  + + C+C   + G++C    +   
Sbjct: 81  VCKCPRGFNGIHCQHNINECEVEPCKNGGIC-TDLVANYSCECPGEFMGRNC----QYKG 135

Query: 81  ND 82
             
Sbjct: 136 GG 137

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 20/84 (23%), Positives = 29/84 (34%), Gaps = 27/84 (32%)

Query: 18 GQCKNG------TCLCVTGWNGKHCTLE--------------GC-PNSCSNHGQCRVNSD 56
          G C  G      +C C  G+   +C+                 C PN C N G C ++  
Sbjct: 12 GICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEA 71

Query: 57 SQW------ECKCSDGWDGKDCSV 74
           +        CKC  G++G  C  
Sbjct: 72 YRGDTFIGYVCKCPRGFNGIHCQH 95

>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} Length = 510

 Score = 49.4 bits (117), Expect = 1e-06
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C     C    CL V  +N   C        CS +G C     ++ +C C+  W G DC+
Sbjct: 425 CGPQMMCLEHRCLPVASFNFSTCLSSKEGTICSGNGVC----SNELKCVCNRHWIGSDCN 480

Query: 74  V 74
            
Sbjct: 481 T 481

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A* Length = 725

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 14/66 (21%), Positives = 21/66 (31%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C+ HG+C  G+C+C   W G +C                    +Q     S G     C 
Sbjct: 541 CSGHGRCVQGSCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKLSTVCG 600

Query: 74  VLLEQN 79
            +    
Sbjct: 601 AVASGL 606

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A* Length = 725

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 6/72 (8%)

Query: 20  CKNGTCLCVTGWNGKHCTL-EGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQ 78
            +         W   +  + +GC + CS HG+C         C C + W G  C      
Sbjct: 515 HQPAPFDKQQTWAIDNVYIGDGCLDMCSGHGRCVQG-----SCVCDEQWGGLYCDEPETS 569

Query: 79  NCNDGKDNDKDG 90
                KDN    
Sbjct: 570 LPTQLKDNFNRA 581

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* Length = 188

 Score = 47.2 bits (111), Expect = 2e-06
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 14  CNEHGQCKNGTCLCVTGWNG---KHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGK 70
            +       G  +  T  N    K C    CP  C N G C    + +  C+C DG+ G 
Sbjct: 121 VDVIVMNSEGNTILXTPQNAIFFKTCQQAECPGGCRNGGFC----NERRICECPDGFHGP 176

Query: 71  DCS 73
            C 
Sbjct: 177 HCE 179

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 17/110 (15%), Positives = 28/110 (25%), Gaps = 25/110 (22%)

Query: 7   IDVDLLWCNEHGQCKN----GTCLCVTGW--NGKHCT---LEGCPNSCSNHGQCRVNSDS 57
           +D     C    + +       C    G   +   C     +     C         S+ 
Sbjct: 42  VDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAV-NTSEY 100

Query: 58  QWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVD-C-EDPECCSNHIC 105
           +  C   +G+     +V       D         +D C E P  C    C
Sbjct: 101 KILCPGGEGFRPNPITV----ILED---------IDECQELPGLCQGGKC 137

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 11/110 (10%), Positives = 18/110 (16%), Gaps = 29/110 (26%)

Query: 14  CNEHGQCKNG----TCLCVTGW----NGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSD 65
               G C N      C C   +        C  +    +C    +     +    C    
Sbjct: 11  TCISGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRP-RGDNGDTACSNEI 68

Query: 66  GWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAP 115
           G                           C          C       ++ 
Sbjct: 69  GVGV-------------------SKASCCCSLGKAWGTPCEMCPAVNTSE 99

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 6e-06
 Identities = 55/430 (12%), Positives = 107/430 (24%), Gaps = 143/430 (33%)

Query: 69  GKDCSVLLEQNCNDGKDNDK-DGLV------DCEDPECCSNHICRSSQLCVSAPKPIDIL 121
           GK  + +    C   K   K D  +      +C  PE     +    +L           
Sbjct: 162 GK--TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML---QKLLYQIDPNWTSR 216

Query: 122 LR--KQPPAITASFFERMKFLIEESSLQNYAKKDNFNESRSAVVRGRVVTSMGMGLVGVR 179
                       S    ++ L++    +N                          L+ + 
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYEN-------------------------CLLVLL 251

Query: 180 -VSTSTPLEGF-----TL--TRDDGWFDLLVNGGGA-VTLQFGRSPFKPHNHIVHVPWNE 230
            V  +     F      L  TR     D L       ++L        P          +
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-------VK 304

Query: 231 VVIIDTITMQMGDDRPVSTTQHACKDHDYDTMKPVVLA-----------TWKHGFQGACP 279
            +++  +  +  D             +      P  L+           TW +     C 
Sbjct: 305 SLLLKYLDCRPQDLPRE-----VLTTN------PRRLSIIAESIRDGLATWDNWKHVNCD 353

Query: 280 DRSSI-------LAESQFKQLGSKLAIMP-TVLITSASIFYQIGRLWQ-----------V 320
             ++I       L  ++++++  +L++ P +  I +      +  +W             
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL----LSLIWFDVIKSDVMVVVN 409

Query: 321 TLKGKGLVKLLRMGRKYLTPS--SNISCASSNPPQV---VQESFQIP------GTGLN-- 367
            L    LV+          PS    +     N   +   + + + IP             
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 368 -------LVYHSSRSAGYLSTIQL----QLTPQVIPDTLQLRKSLCKDFT---------- 406
                  + +H       L  I+      L   V  D   L + +  D T          
Sbjct: 470 DQYFYSHIGHH-------LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522

Query: 407 --HTLTFYEK 414
               L FY+ 
Sbjct: 523 TLQQLKFYKP 532

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 56/384 (14%), Positives = 95/384 (24%), Gaps = 116/384 (30%)

Query: 79  NCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM- 137
           +C D +D  K  L      E   +HI  S        +    LL KQ   +   F E + 
Sbjct: 34  DCKDVQDMPKSIL---SKEEI--DHIIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEVL 87

Query: 138 ----KFL---IEESSLQNYAKKDNFNESRSA------------VVRGRVVTSMGMGLVGV 178
               KFL   I+    Q       + E R              V R +    +   L+ +
Sbjct: 88  RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 179 RVSTSTPLEGFTLTRDDGWFDLLVNG-GGAVTLQFGRSPFKPHNHIVHVPWNEVVIIDTI 237
           R +                 ++L++G  G      G++                V +D  
Sbjct: 148 RPAK----------------NVLIDGVLG-----SGKT---------------WVALD-- 169

Query: 238 TMQMGDDRPVSTTQHACKDHDYDTMKPVVLATWKHGFQ------GACPDRSSILAESQ-- 289
                           C  +                F+        C    ++L   Q  
Sbjct: 170 ---------------VCLSYKVQCKMD---------FKIFWLNLKNCNSPETVLEMLQKL 205

Query: 290 FKQLGSKLA----IMPTVLITSASIFYQIGRLWQVTLKGKGL-----------VKLLRMG 334
             Q+             + +   SI  ++ RL +       L                + 
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265

Query: 335 RKYLTPSSNISCASS-NPPQVVQESFQIPGTGLNLVYHSSRSAGYLSTIQLQLTPQVI-- 391
            K L  +         +       S       L      S    YL      L  +V+  
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 392 -PDTLQLRKSLCKDFTHTLTFYEK 414
            P  L +     +D   T   ++ 
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKH 349

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A* Length = 280

 Score = 46.4 bits (109), Expect = 7e-06
 Identities = 19/81 (23%), Positives = 25/81 (30%), Gaps = 27/81 (33%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHC-----------TLEGCPNS-----CSNHGQCRVNSDS 57
           C+  G  + G C C TG+ GK+C               C        CS  G C      
Sbjct: 198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG--- 254

Query: 58  QWECKCSDGWD------GKDC 72
             +C C           G+ C
Sbjct: 255 --QCLCHTSDVPGKLIYGQYC 273

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 42  PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS 101
              C ++G C+ +      C CS G++G +C +   +   +  D  +   +  ++   CS
Sbjct: 10  SQPCLHNGSCQDSIWGY-TCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCS 68

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 11/95 (11%)

Query: 14  CNEHGQCKNG----TCLCVTGWNGKHCTLE-----GCPNSCSNHGQCRVNSDSQWECKCS 64
           C  +G C++     TC C  G+ G +C L              H  C    +S   C C+
Sbjct: 13  CLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF-CLPGQESY-TCSCA 70

Query: 65  DGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPEC 99
            G+   +       +               +  + 
Sbjct: 71  QGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDL 105

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 25 CLCVTGWNGKHCT-LEGC-PNSCSNHGQCR-VNSDSQWECKCSDGWDGKDC 72
          C C +G    H   ++ C    C N G C+     S + C+C +G+ GK C
Sbjct: 34 CWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSC 84

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus} Length = 387

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 16/66 (24%), Positives = 22/66 (33%)

Query: 14  CNEHGQCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
           C+ HG C +G C C  G+     T      + S          S    K + G  G  C 
Sbjct: 198 CSGHGDCISGVCFCDLGYTAAQGTCVSNTPNHSEMFDRFEGKLSPLWYKITGGQVGTGCG 257

Query: 74  VLLEQN 79
            L +  
Sbjct: 258 TLNDGR 263

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 28/117 (23%)

Query: 13  WCNEHGQCKNG-TCLCVTGW---------NGKHCT-----LEGCPNSCSNHGQCRVNSDS 57
           WC +   C N   C C  G+           + C            SC     C  N++ 
Sbjct: 8   WCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDC-WNTEG 66

Query: 58  QWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDP-ECCSN-HICRSSQLCV 112
            ++C CS G+         E         ++     C+D  EC S  H C SS +C 
Sbjct: 67  SYDCVCSPGY---------EPVSGAKTFKNESE-NTCQDVDECSSGQHQCDSSTVCF 113

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} Length = 551

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 10/68 (14%)

Query: 40  GCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPEC 99
           G P+ C  H  C +  D    C C+ GW G             G+D D DG  D +    
Sbjct: 24  GSPSECHEHADCVLERDGSRSCVCAVGWAG--------NGILCGRDTDLDGFPDEKLR-- 73

Query: 100 CSNHICRS 107
           C    CR 
Sbjct: 74  CPERQCRK 81

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 31/117 (26%)

Query: 8   DVDLLWCNEHG---QCKNGT-----CLCVTGWNGKHCTLEGCPNSCSNHG-QCRVNSDSQ 58
            VD   C       QC+        C+C  G+         C   C+        + ++Q
Sbjct: 3   PVD--PCFRANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQ 60

Query: 59  WECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAP 115
             C+C +G+   D        C D         +D    EC +   C  S +C + P
Sbjct: 61  ASCECPEGYILDDG-----FICTD---------ID----ECENGGFC--SGVCHNLP 97

>3eto_A Neurogenic locus notch homolog protein 1; alpha-beta sandwich, HD domain, LNR repeat, calcium-binding, domain, autoinhibition, activator, T-all; 2.00A {Homo sapiens} PDB: 3l95_X* 3i08_B 1pb5_A Length = 242

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 21/139 (15%)

Query: 14  CNEHGQCK--NGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSD-GWDGK 70
           CN +  C    G C        K+CT         + G C        +C  +   +DG 
Sbjct: 23  CN-NHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHC------DSQCNSAGCLFDGF 75

Query: 71  D-------CSVLLEQNCNDGKDNDK-DGLVDCEDPECCSNH-ICRSSQLCVSAPKPIDIL 121
           D       C+ L +Q C D   +   D    C   EC  +   C        A   + ++
Sbjct: 76  DCQRAEGQCNPLYDQYCKDHFSDGHCDQ--GCNSAECEWDGLDCAEHVPERLAAGTLVVV 133

Query: 122 LRKQPPAITASFFERMKFL 140
           +   P  +  S F  ++ L
Sbjct: 134 VLMPPEQLRNSSFHFLREL 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	418
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.65
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.61
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.45
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.38
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.38
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.37
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.27
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.23
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.22
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.15
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.14
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.08
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.07
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.07
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.02
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.01
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.98
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.97
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.89
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.86
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.83
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.82
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.78
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.77
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.76
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.72
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.66
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.65
2vh0_B	134	Activated factor XA light chain; serine protease,	98.63
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.63
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.61
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.6
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.56
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.54
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.53
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.51
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.51
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.47
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.43
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.42
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.41
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.39
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.38
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.36
2vh0_B	134	Activated factor XA light chain; serine protease,	98.34
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.31
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.31
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.28
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.26
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.21
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.2
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.1
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.06
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.95
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.88
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.86
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.8
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.75
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.75
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.68
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.67
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.66
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.63
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.52
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.47
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.45
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.45
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.44
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.36
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.36
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.35
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.27
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.25
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.22
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.1
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.06
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.03
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.0
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.92
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.9
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	96.84
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.84
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.82
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.63
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.61
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.58
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	96.51
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.45
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	96.43
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.39
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.15
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.07
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	95.73
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.65
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.58
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	95.55
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	95.5
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	95.46
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	95.43
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.25
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	95.24
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.87
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	94.36
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	93.89
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.82
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.61
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.38
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.36
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	93.32
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.24
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	93.24
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	93.05
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	92.7
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	92.38
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	91.62
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	91.28
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	91.13
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	90.92
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.92
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.75
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	90.37
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	88.14
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	88.02
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	87.59
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	87.4
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	87.37
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	86.38
1ob1_C	99	Major merozoite surface protein; immune system, im	86.29
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	86.27
1ob1_C	99	Major merozoite surface protein; immune system, im	86.25
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	85.31
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	84.35
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	83.09
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	82.55

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.65  E-value=2.6e-16  Score=136.93  Aligned_cols=107  Identities=24%  Similarity=0.665  Sum_probs=92.6

Q ss_pred             ccccCCC---cCCCCCcEEec----ceEeeCCCCcCCCCC--cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559          5 SNIDVDL---LWCNEHGQCKN----GTCLCVTGWNGKHCT--LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus         5 ~~id~C~---~pC~n~G~C~~----g~C~C~~G~~G~~Ce--~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      .++|+|.   .+|.++|+|++    ++|.|++||+|..|+  +++| .++|.++++| .+..++|.|.|++||+|..|+.
T Consensus         3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C-~~~~g~~~C~C~~G~~G~~C~~   81 (135)
T 2vj3_A            3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATC-LDQIGEFQCICMPGYEGVHCEV   81 (135)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEE-EECSSCEEEECCTTEESSSSCE
T ss_pred             cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEE-eCCCCCceeeCCCCCcCCccee
Confidence            4789996   59999999986    599999999999997  5789 7899999999 6778899999999999999985


Q ss_pred             cccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         75 LLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        75 ~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      .+                     +.|...+|.+++.|++..+   .|.|.|++||+|..|+.
T Consensus        82 ~~---------------------~~C~~~~C~~~g~C~~~~g---~~~C~C~~G~~G~~C~~  119 (135)
T 2vj3_A           82 NT---------------------DECASSPCLHNGRCLDKIN---EFQCECPTGFTGHLCQV  119 (135)
T ss_dssp             EC---------------------CTTTTCCSTTTCEEEECSS---CEEEECCTTEESSSSCE
T ss_pred             cC---------------------CcccCCCcCCCCEeECCCC---CeEEECCCCCcCCccCc
Confidence            44                     3345568999999998876   79999999999999975

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.61  E-value=8.8e-16  Score=134.02  Aligned_cols=106  Identities=24%  Similarity=0.588  Sum_probs=87.1

Q ss_pred             cCCC-cCCCCCcEEec------ceEeeCCCCcCCCCCc--------------CCC-CCCCCCCcEEec------CCCCCc
Q psy10559          8 DVDL-LWCNEHGQCKN------GTCLCVTGWNGKHCTL--------------EGC-PNSCSNHGQCRV------NSDSQW   59 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~------g~C~C~~G~~G~~Ce~--------------~~C-~~~C~~~G~C~~------~~~g~~   59 (418)
                      |+|. ++|.++|+|++      ++|.|++||+|..|+.              +.| .++|.++|+|..      +..++|
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~   80 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGY   80 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCe
Confidence            5685 59999999985      5899999999999974              467 778999999932      445789


Q ss_pred             eEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         60 ECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        60 ~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      .|.|++||+|..|+..+                     +.|...+|.+++.|++..+   .|.|.|++||+|..|+..
T Consensus        81 ~C~C~~G~~G~~C~~~i---------------------~~C~~~~C~~~~~C~~~~g---~~~C~C~~G~~G~~c~~~  134 (143)
T 4d90_A           81 VCKCPRGFNGIHCQHNI---------------------NECEVEPCKNGGICTDLVA---NYSCECPGEFMGRNCQYK  134 (143)
T ss_dssp             EEECCTTEESTTSCEEC---------------------CTTTTCCSCTTCEEEEETT---EEEEECCTTCBSTTSCBC
T ss_pred             EeECcCCCcCCCcccCC---------------------CcCCCCCCCCCCEeECCCC---CeEeECCCCCccCCceec
Confidence            99999999999997544                     3445667999999999876   899999999999998874

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.45  E-value=3.4e-14  Score=124.34  Aligned_cols=114  Identities=24%  Similarity=0.615  Sum_probs=91.2

Q ss_pred             cCCCcCCCCCcEEec-ceEeeCCCCcC---------CCCC-cCCC-CC---CCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559          8 DVDLLWCNEHGQCKN-GTCLCVTGWNG---------KHCT-LEGC-PN---SCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus         8 d~C~~pC~n~G~C~~-g~C~C~~G~~G---------~~Ce-~~~C-~~---~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      ..|+.+|.++|+|++ ++|.|++||+|         ..|+ +++| ..   +|.++++| ++..++|.|.|++||+|..+
T Consensus         3 ~~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C-~n~~g~y~C~C~~Gy~g~~~   81 (143)
T 2bou_A            3 RGCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDC-WNTEGSYDCVCSPGYEPVSG   81 (143)
T ss_dssp             CCCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEE-EECSSCEEEEECTTEEETTC
T ss_pred             CCCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEE-EcCCCCeEeECCCCcccCcC
Confidence            468899999999987 89999999998         5785 7889 33   79999999 77789999999999999877


Q ss_pred             CccccccCCCCccCCCCCccccCCCCCCC--CCCCCCCCccccCCCCCCceeecCCCCccccccc
Q psy10559         73 SVLLEQNCNDGKDNDKDGLVDCEDPECCS--NHICRSSQLCVSAPKPIDILLRKQPPAITASFFE  135 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~~G~~~C~dpdCc~--~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce  135 (418)
                      +....          ......|.+.+.|.  ..+|.+++.|++..+   .|.|.|++||+|....
T Consensus        82 ~~~~~----------~~~~~~C~dideC~~~~~~C~~~~~C~n~~g---~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           82 AKTFK----------NESENTCQDVDECSSGQHQCDSSTVCFNTVG---SYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             CSCBS----------SGGGCCEEECCHHHHTCCCCCTTSEEEECSS---CEEEECCSSSCBCTTC
T ss_pred             ccccc----------cCCCCCcCCccCccCcCCCCCCCCEEECCCC---CEEeeCCCCcccCCCC
Confidence            64320          01123566677665  367999999999887   8999999999996543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.38  E-value=2.8e-13  Score=134.58  Aligned_cols=117  Identities=25%  Similarity=0.509  Sum_probs=59.1

Q ss_pred             cCCCcCCCCCcEEec-ceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc-cccCC-CCc
Q psy10559          8 DVDLLWCNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL-EQNCN-DGK   84 (418)
Q Consensus         8 d~C~~pC~n~G~C~~-g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~-~~~C~-~g~   84 (418)
                      .+|+++|.++|+|.+ +.|.|.+||.|..|+.+.|..+|.++|+| ..   .+.|.|.+||+|..|+... ...|. +|.
T Consensus       149 ~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C-~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~  224 (324)
T 2ygq_A          149 AECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLC-VT---PGFCICPPGFYGVNCDKANCSTTCFNGGT  224 (324)
T ss_dssp             CCCSSCCCSSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEE-CS---SCCEECCTTCBTTTTCBCCCSSCCCSSCC
T ss_pred             CCCCCCCCCCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEE-cC---CCEEeCCCCccCCCcccCcCCCCCCCCCe
Confidence            467778888899975 78999999999988877787788888888 33   4678898899888887643 23454 345


Q ss_pred             cCCC--------CCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         85 DNDK--------DGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        85 c~~~--------~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      |.+.        .....|+...|  ..+|.+++.|..      .+.|.|++||+|..|+.
T Consensus       225 C~~~~~C~C~~G~~G~~C~~~~C--~~~C~~~g~C~~------~~~C~C~~G~~G~~C~~  276 (324)
T 2ygq_A          225 CFYPGKCICPPGLEGEQCEISKC--PQPCRNGGKCIG------KSKCKCSKGYQGDLCSK  276 (324)
T ss_dssp             BSCSSCBCCCTTCCTTTTC-----------------------------------------
T ss_pred             eCCCCeeeCCCCccCCCCCcCcC--CCcCCCCCEECC------CCEEECCCCCcCCCCcC
Confidence            5431        11223322222  246777777763      24678888888877764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.38  E-value=2e-13  Score=123.26  Aligned_cols=128  Identities=26%  Similarity=0.559  Sum_probs=94.6

Q ss_pred             CCccccc---CCCc--CCCCCcEEe-cceEeeCCCCcCCCCCcCCCCCCCC-CCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559          2 RGFSNID---VDLL--WCNEHGQCK-NGTCLCVTGWNGKHCTLEGCPNSCS-NHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus         2 ~Gf~~id---~C~~--pC~n~G~C~-~g~C~C~~G~~G~~Ce~~~C~~~C~-~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      .||++.+   .|..  .|.++|+|. .++|.|.+||+|..|+.+.|...|. .+|.| .+   .+.|.|.+||+|..|+.
T Consensus        23 ~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C-~~---~~~C~C~~G~~G~~C~~   98 (169)
T 2vj2_A           23 DYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSC-KL---PGDCRCQYGWQGLYCDK   98 (169)
T ss_dssp             TTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCEECCCTTCCTTTEEC-SS---TTCCEECTTEESSSSCE
T ss_pred             CcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCCCCCCccc-CC---CCeeECCCCCCCCCccc
Confidence            5777644   3432  688889996 4899999999999999888987897 78999 43   57999999999999986


Q ss_pred             ccccc-CCCCccCC--------CCCccccC-CCCCCC-CCCCCCCCccccC-CCCCCceeecCCCCccccccce
Q psy10559         75 LLEQN-CNDGKDND--------KDGLVDCE-DPECCS-NHICRSSQLCVSA-PKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        75 ~~~~~-C~~g~c~~--------~~G~~~C~-dpdCc~-~~~C~~~~~C~~~-~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      -.... |.+|.|..        +.....|+ +.+.|. ..+|.++++|++. ++   .|.|.|++||+|.+|+.
T Consensus        99 C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~---~~~C~C~~G~~G~~Ce~  169 (169)
T 2vj2_A           99 CIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPD---KYQCSCPEGYSGPNCEI  169 (169)
T ss_dssp             ECCCTTCSSEECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTT---CEEEECCTTCCSTTSCC
T ss_pred             CCCCCCCCCCCcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCC---CcEeECCCCCcCcCcCC
Confidence            44333 66665552        11112333 333343 3789999999985 44   78999999999998873

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.37  E-value=7.2e-13  Score=131.66  Aligned_cols=124  Identities=24%  Similarity=0.542  Sum_probs=59.5

Q ss_pred             CCcccc----cCCCcCCCCCcEEec-ceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559          2 RGFSNI----DVDLLWCNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus         2 ~Gf~~i----d~C~~pC~n~G~C~~-g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .||++.    +.|.++|.++|+|.+ ++|.|.+||+|..|+.+.|..+|.++|+| ..   .+.|.|.+||+|..|+...
T Consensus       171 ~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C-~~---~~~C~C~~G~~G~~C~~~~  246 (324)
T 2ygq_A          171 DGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC-FY---PGKCICPPGLEGEQCEISK  246 (324)
T ss_dssp             TTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCB-SC---SSCBCCCTTCCTTTTC---
T ss_pred             CCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCee-CC---CCeeeCCCCccCCCCCcCc
Confidence            467653    457779999999986 89999999999999988898899999999 43   4689999999999998643


Q ss_pred             -cccCC-CCccCC--------CCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         77 -EQNCN-DGKDND--------KDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        77 -~~~C~-~g~c~~--------~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                       ...|. +|.|..        +.....|+.+.|  ..+|.++++|.+      .+.|.|++||+|.+|++.
T Consensus       247 C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C--~~~C~~~g~C~~------~~~C~C~~G~~G~~C~~~  309 (324)
T 2ygq_A          247 CPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVC--EPGCGAHGTCHE------PNKCQCQEGWHGRHCNKR  309 (324)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             CCCcCCCCCEECCCCEEECCCCCcCCCCcCCCC--CCCCCCCCEECC------CCEeECCCCCcCCCCCCC
Confidence             23454 345543        112223333333  256888999985      247999999999999873

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.27  E-value=2.6e-12  Score=137.51  Aligned_cols=123  Identities=22%  Similarity=0.460  Sum_probs=92.6

Q ss_pred             cccCCC-cCCCCCcEEec-----ceE-eeCCCCcC--CCCC-cCCC-CCC--CCCCc---EEecCCCCCceEE-cCCCCC
Q psy10559          6 NIDVDL-LWCNEHGQCKN-----GTC-LCVTGWNG--KHCT-LEGC-PNS--CSNHG---QCRVNSDSQWECK-CSDGWD   68 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~-----g~C-~C~~G~~G--~~Ce-~~~C-~~~--C~~~G---~C~~~~~g~~~C~-C~~G~~   68 (418)
                      ++++|. +||.++++|.+     ++| .|++||+|  ..|+ +++| .++  |.+++   +| .+..++|+|. |++||+
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~C-vNt~gsY~C~~C~~Gy~   80 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRC-VNTQPGFHCLPCPPRYR   80 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCE-EECSSSEEECCCCTTEE
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccce-eeccCceecccCCCCcc
Confidence            578995 59999999975     589 99999998  8997 7899 555  99998   99 7888999999 999999


Q ss_pred             CCCCCccccccCCCCccCCCCCccccCCCCCCCC--CCCCCCCccccCC-CCCCceeecCCCCccc--cccce
Q psy10559         69 GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSN--HICRSSQLCVSAP-KPIDILLRKQPPAITA--SFFER  136 (418)
Q Consensus        69 G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~--~~C~~~~~C~~~~-~~~~~~~C~C~~G~~g--~~Ce~  136 (418)
                      |..|+......+       ......|.+.+.|..  .+|.+++.|++.. .....|.|.|++||+|  ..|+.
T Consensus        81 G~~c~g~g~~~~-------~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~  146 (634)
T 1yo8_A           81 GNQPVGVGLEAA-------KTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE  146 (634)
T ss_dssp             ECCCEESSSHHH-------HSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred             cCcccccccccc-------ccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCccccc
Confidence            998862110000       011234666666653  5899999999987 1223899999999998  67764

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.23  E-value=1.4e-11  Score=126.66  Aligned_cols=112  Identities=24%  Similarity=0.583  Sum_probs=84.4

Q ss_pred             CCcccccCCCc---CCCCCcEEec--ceEeeCCCCcCCCCCcC------------CC--CCCCCCCcEEecCCCCCceEE
Q psy10559          2 RGFSNIDVDLL---WCNEHGQCKN--GTCLCVTGWNGKHCTLE------------GC--PNSCSNHGQCRVNSDSQWECK   62 (418)
Q Consensus         2 ~Gf~~id~C~~---pC~n~G~C~~--g~C~C~~G~~G~~Ce~~------------~C--~~~C~~~G~C~~~~~g~~~C~   62 (418)
                      .||++ +.|..   +|.++|+|.+  |+|.|++||.|.+|+..            .|  ...|.+++.|.   .+.+.|.
T Consensus       191 ~g~~G-~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~---~~~~~C~  266 (423)
T 2gy5_A          191 AQKWG-PECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL---PDPYGCS  266 (423)
T ss_dssp             TTEES-TTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE---TTTTEEE
T ss_pred             CCCCC-CCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC---CCCCeEE
Confidence            46665 45643   8999999986  89999999999999842            34  34577788883   4678999


Q ss_pred             cCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         63 CSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        63 C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      |.+||+|..|+.    .|..|+-.     ..|..     ..+|.+++.|.+..      .|.|++||+|.+|++.
T Consensus       267 C~~G~~G~~C~~----~C~~G~~G-----~~C~~-----~C~C~ngg~C~~~~------~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          267 CATGWKGLQCNE----ACHPGFYG-----PDCKL-----RCSCNNGEMCDRFQ------GCLCSPGWQGLQCERE  321 (423)
T ss_dssp             CCBTCBSGGGCB----CCCTTBCS-----BTTCC-----BCCCTTCCEEETTT------EEECCTTCBSTTSCBC
T ss_pred             eCCCcccccccC----ccCCCCcC-----Ccccc-----cccCCCCCEecCCC------ceECCCCCcCCCCccC
Confidence            999999999984    46555432     23432     22688999998754      3999999999999973

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.22  E-value=1.5e-12  Score=118.76  Aligned_cols=107  Identities=21%  Similarity=0.505  Sum_probs=85.0

Q ss_pred             cccCCC-----cCCCCCcEEec---------ceEeeCCCCcCCC--CCcCCC-CCCCCCCcEEec----CCCCCceEEcC
Q psy10559          6 NIDVDL-----LWCNEHGQCKN---------GTCLCVTGWNGKH--CTLEGC-PNSCSNHGQCRV----NSDSQWECKCS   64 (418)
Q Consensus         6 ~id~C~-----~pC~n~G~C~~---------g~C~C~~G~~G~~--Ce~~~C-~~~C~~~G~C~~----~~~g~~~C~C~   64 (418)
                      ++++|.     .+|.++|+|++         ++|.|++||.|..  |++++| .++|.++|+| .    +..++|.|.|+
T Consensus        43 ~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C-~~~~~~~~g~~~C~C~  121 (186)
T 1z1y_A           43 EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGEC-IVEYLSEIQSAGCSCA  121 (186)
T ss_dssp             ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEE-EEEEETTEEEEEEEEC
T ss_pred             CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEE-eeCCcCCCCCceEECC
Confidence            457886     37999999974         3799999999985  457889 7889999999 5    66788999999


Q ss_pred             CCCCC-----CCCCccccccCCCCccCCCCCccccCCCCCCCCCCC-CCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         65 DGWDG-----KDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHIC-RSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        65 ~G~~G-----~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C-~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +||+|     ..|+...                    .+.|. .+| .+++.|++..+   .|.|.|++||+|..+++.
T Consensus       122 ~Gy~g~~~~~~~C~~~~--------------------~~~C~-~~C~~~~~~C~n~~g---~y~C~C~~G~~g~~~~~~  176 (186)
T 1z1y_A          122 IGXVPNPEDEXXCTXTG--------------------ETACQ-LXCNTDNEVCXNVEG---VYXCQCMEGFTFDXEXNV  176 (186)
T ss_dssp             TEEEEETTTTTEEEEEE--------------------CCCCC-CCCCTTTEEEEEETT---EEEEEECTTCEEETTTTE
T ss_pred             CCCcccCCCCCcceEcC--------------------CCccc-ccccccCcceecCCC---CeeeECCCCCccCccccc
Confidence            99998     4454221                    12233 379 88999999877   899999999999888764

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.15  E-value=6.2e-14  Score=135.11  Aligned_cols=125  Identities=6%  Similarity=-0.028  Sum_probs=94.2

Q ss_pred             CCCcCCCCCcEEec----ceEeeCCCCcCCCCCc--CC-----------------------------C-CCCCCCCcEEe
Q psy10559          9 VDLLWCNEHGQCKN----GTCLCVTGWNGKHCTL--EG-----------------------------C-PNSCSNHGQCR   52 (418)
Q Consensus         9 ~C~~pC~n~G~C~~----g~C~C~~G~~G~~Ce~--~~-----------------------------C-~~~C~~~G~C~   52 (418)
                      ++..+|.++|+|++    |+|.|+.||+|.+|+.  ++                             | +.+|.++|+| 
T Consensus        35 ~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C-  113 (267)
T 4fbr_A           35 ALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKT-  113 (267)
T ss_dssp             EEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSE-
T ss_pred             cCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEE-
Confidence            34458999999987    7999999999999973  22                             4 4568888999 


Q ss_pred             cCCCCCceEEcCCCCCCCCCCccccc-----cCCCCccCCCC---CccccCCCCCCCCCCCCCCCccccCCCCCCceeec
Q psy10559         53 VNSDSQWECKCSDGWDGKDCSVLLEQ-----NCNDGKDNDKD---GLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRK  124 (418)
Q Consensus        53 ~~~~g~~~C~C~~G~~G~~C~~~~~~-----~C~~g~c~~~~---G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~  124 (418)
                      ++..++|.|.|+.||+|..|+..+..     -|..+.|.+..   ....|..-.++...+|.++++|++...   .|.|.
T Consensus       114 ~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~---~y~C~  190 (267)
T 4fbr_A          114 LTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTM---TYNGE  190 (267)
T ss_dssp             EEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEE---EETTS
T ss_pred             ecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCC---CeEEe
Confidence            66788999999999999999987732     13333333211   123454445566778999999998665   89999


Q ss_pred             CCCCcccccccee
Q psy10559        125 QPPAITASFFERM  137 (418)
Q Consensus       125 C~~G~~g~~Ce~~  137 (418)
                      |++||+|..|+..
T Consensus       191 Cp~Gf~G~~c~~~  203 (267)
T 4fbr_A          191 GPIGFRGTLTSPD  203 (267)
T ss_dssp             CCEEEEEEEEETT
T ss_pred             CCCCccccccccc
Confidence            9999999988753

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.14  E-value=6e-12  Score=114.72  Aligned_cols=95  Identities=22%  Similarity=0.521  Sum_probs=75.8

Q ss_pred             CcCCCCCcEEec----ceEeeCCCCcCC---CCC-cCCCC-----CCCCCCcEEecCCC-----CCceEEcCCCCCCCCC
Q psy10559         11 LLWCNEHGQCKN----GTCLCVTGWNGK---HCT-LEGCP-----NSCSNHGQCRVNSD-----SQWECKCSDGWDGKDC   72 (418)
Q Consensus        11 ~~pC~n~G~C~~----g~C~C~~G~~G~---~Ce-~~~C~-----~~C~~~G~C~~~~~-----g~~~C~C~~G~~G~~C   72 (418)
                      .++|. +|+|++    ++|.|++||+|.   .|+ +++|.     ++|.++++| ++..     ++|.|.|++||+|..|
T Consensus        10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C-~~~~~~~~~g~y~C~C~~G~~g~~~   87 (186)
T 1z1y_A           10 DTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQC-IENPDPAQVNMYXCGCIEGYTLXED   87 (186)
T ss_dssp             TCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEE-EECSSTTSSCSEEEEECTTEEEETT
T ss_pred             CCCCC-CCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEe-ecCCCCcCCCCEECCCCCCCccCCC
Confidence            35998 569986    699999999987   886 68893     569999999 6666     8999999999999765


Q ss_pred             CccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccc----cCCCCCCceeecCCCCccc
Q psy10559         73 SVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCV----SAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~----~~~~~~~~~~C~C~~G~~g  131 (418)
                      .-.+                     +.|...+|.+++.|+    +..+   .|.|.|++||+|
T Consensus        88 ~C~~---------------------d~C~~~~C~~~g~C~~~~~~~~g---~~~C~C~~Gy~g  126 (186)
T 1z1y_A           88 TCVL---------------------DVCQYXNCGESGECIVEYLSEIQ---SAGCSCAIGXVP  126 (186)
T ss_dssp             EEEE---------------------GGGTTCCCCTTEEEEEEEETTEE---EEEEEECTEEEE
T ss_pred             CCCC---------------------CcCcCCCCCCCCEEeeCCcCCCC---CceEECCCCCcc
Confidence            4222                     334455798899998    6555   799999999998

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.08  E-value=9.6e-11  Score=126.77  Aligned_cols=101  Identities=27%  Similarity=0.595  Sum_probs=75.3

Q ss_pred             cCCCc-----CCCCCcEEecceEeeC----CCCcCCCCC--cCCCC----CCCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559          8 DVDLL-----WCNEHGQCKNGTCLCV----TGWNGKHCT--LEGCP----NSCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus         8 d~C~~-----pC~n~G~C~~g~C~C~----~G~~G~~Ce--~~~C~----~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      ++|..     +|+++|+|.+|+|.|.    +||+|..|+  .+.|.    .+|.++|+| .+    +.|.|.+||+|..|
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C-~~----g~C~C~~Gy~G~~C  558 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC-SC----GDCLCDSDWTGYYC  558 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEE-ET----TEEEECTTEESSSS
T ss_pred             CcCCCCCCCCCCCCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEe-cC----CeeECcCCCcCCCC
Confidence            45753     4999999999999999    999999998  56794    479999999 43    69999999999999


Q ss_pred             CccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecC-CCCccccccce
Q psy10559         73 SVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQ-PPAITASFFER  136 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C-~~G~~g~~Ce~  136 (418)
                      +....             ...|...   ...+|.+++.|.+  +     .|.| ++||+|.+|+.
T Consensus       559 eC~~~-------------~~~C~~~---~g~~C~~~G~C~~--g-----~C~C~~~Gy~G~~Ce~  600 (690)
T 3fcs_B          559 NCTTR-------------TDTCMSS---NGLLCSGRGKCEC--G-----SCVCIQPGSYGDTCEK  600 (690)
T ss_dssp             CEECC-------------CTTTBCT---TSSBTSSSCEEET--T-----EEECCSTTCBSTTSCB
T ss_pred             ccCCC-------------CCcccCC---CCCCCCCCCEEeC--C-----EEECCCCCccCCCcCc
Confidence            82210             0112110   1246778888865  2     6888 88888888875

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.07  E-value=4.7e-11  Score=97.06  Aligned_cols=83  Identities=17%  Similarity=0.259  Sum_probs=65.9

Q ss_pred             ceEeeCCCCcCCCCCcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCC-ccccccCCCCccCCCCCccccCCCCCC
Q psy10559         23 GTCLCVTGWNGKHCTLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS-VLLEQNCNDGKDNDKDGLVDCEDPECC  100 (418)
Q Consensus        23 g~C~C~~G~~G~~Ce~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~-~~~~~~C~~g~c~~~~G~~~C~dpdCc  100 (418)
                      ++|.|.+||+|..|++++| .++|.       +..+.|.|.|++||+  .|+ ..+                     +.|
T Consensus         2 y~C~C~~g~~g~~c~~~~c~~~pC~-------n~~~~y~C~C~~G~~--~C~~~~~---------------------~~C   51 (91)
T 1tpg_A            2 YQVICRDEKTQMIYQQHQSWLRPVL-------RSNRVEYCWCNSGRA--QCHSVPV---------------------KSC   51 (91)
T ss_dssp             CCCCCBCSSSCCBCCSSCEEEEECS-------SSSCEEEEECSSSCC--BCCEECE---------------------EEC
T ss_pred             eeeECCCCCcCCeECCCcccCCccc-------cCCCCcEeECCCCCc--ccccCcC---------------------Ccc
Confidence            6899999999999998888 56654       346688999999998  776 233                     334


Q ss_pred             CCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        101 SNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       101 ~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      ..++|.++++|++... ...|.|.|++||+|.+|+.
T Consensus        52 ~~~pC~ngg~C~~~~~-~~~~~C~C~~G~~G~~Ce~   86 (91)
T 1tpg_A           52 SEPRCFNGGTCQQALY-FSDFVCQCPEGFAGKSCEI   86 (91)
T ss_dssp             SSCCSCTTCEEEEESS-SSCEEEECCTTCBSSSCCB
T ss_pred             cCCCCCCCCEeecCCC-CCCeEeECCCCCcCCcCCc
Confidence            5677999999998761 1278999999999999985

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.07  E-value=2.4e-11  Score=103.27  Aligned_cols=97  Identities=25%  Similarity=0.569  Sum_probs=73.6

Q ss_pred             ccccCCC-cCCCCCcEEec-----ceEeeCCCCcCCCCCcCCCCCCCCCC---cEEecCCCCCceEEcCCCCC---CCCC
Q psy10559          5 SNIDVDL-LWCNEHGQCKN-----GTCLCVTGWNGKHCTLEGCPNSCSNH---GQCRVNSDSQWECKCSDGWD---GKDC   72 (418)
Q Consensus         5 ~~id~C~-~pC~n~G~C~~-----g~C~C~~G~~G~~Ce~~~C~~~C~~~---G~C~~~~~g~~~C~C~~G~~---G~~C   72 (418)
                      .++|+|. ++|.+  +|++     ++|.|++||.|..+++++|...|.++   +.| .+ .++|.|.|++||+   |..|
T Consensus         2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C-~~-~~~y~C~C~~Gy~~~~g~~C   77 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DP-NTQASCECPEGYILDDGFIC   77 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEE-CT-TSTTCEECCTTEEEETTTEE
T ss_pred             CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcc-cC-CCCeEeECCCCccCCCCCcc
Confidence            5789996 49974  9975     58999999999877665563345444   788 56 5889999999999   6566


Q ss_pred             CccccccCCCCccCCCCCccccCCCCCCCC-CCCCCCCccccCCCCCCceeecCCCCcccc
Q psy10559         73 SVLLEQNCNDGKDNDKDGLVDCEDPECCSN-HICRSSQLCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus        73 ~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~-~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                      .                      +.+.|.. .+|  ++.|++..+   +|.|.|++||++.
T Consensus        78 ~----------------------dideC~~~~~C--~~~C~n~~g---~y~C~C~~G~~g~  111 (118)
T 1dx5_I           78 T----------------------DIDECENGGFC--SGVCHNLPG---TFECICGPDSALA  111 (118)
T ss_dssp             E----------------------ECCHHHHCSSC--SSEEEECSS---SEEEEECSSSSCE
T ss_pred             c----------------------cccccCCCCCC--cCeEEeCCC---CEEEECCCCCccC
Confidence            3                      3334433 678  688999877   8999999999873

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.02  E-value=2.7e-10  Score=123.03  Aligned_cols=96  Identities=23%  Similarity=0.604  Sum_probs=74.7

Q ss_pred             CCCCCcEEecceEeeC------CCCcCCCCC--cCCCC----CCCCC--CcEEecCCCCCceEEcCCCCCCCCCCccccc
Q psy10559         13 WCNEHGQCKNGTCLCV------TGWNGKHCT--LEGCP----NSCSN--HGQCRVNSDSQWECKCSDGWDGKDCSVLLEQ   78 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~------~G~~G~~Ce--~~~C~----~~C~~--~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~   78 (418)
                      +|+++|+|.+++|.|.      +||.|.+|+  ...|.    .+|.+  +|+|. .    ..|.|.+||+|..|+.... 
T Consensus       483 ~Cs~~G~C~~G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~-~----g~C~C~~G~~G~~Cec~~~-  556 (687)
T 3k6s_B          483 ICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF-C----GKCRCHPGFEGSACQCERT-  556 (687)
T ss_dssp             GGGSSEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEE-T----TEEEECTTCCSTTSCSCCS-
T ss_pred             cCCCCCEEeCCEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEE-C----CEEEcCCCCcCCCCccCCC-
Confidence            4999999999999999      999999998  56784    35998  99994 3    3899999999999983320 


Q ss_pred             cCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         79 NCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        79 ~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                                  ...|...   ...+|.+++.|..  +     .|.|.+||+|..|+.
T Consensus       557 ------------~~~C~~~---~g~~Cs~~G~C~~--g-----~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          557 ------------TEGCLNP---RRVECSGRGRCRC--N-----VCECHSGYQLPLCQE  592 (687)
T ss_dssp             ------------SCTTBCT---TCSBTSSSCCBCS--S-----CBCCSTTCCTTTTCC
T ss_pred             ------------CCCCCCC---CCCCCCCCCcCCC--C-----EEECCCCCcCCCCCC
Confidence                        0122111   1236888888876  2     599999999999986

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.01  E-value=3.7e-10  Score=97.78  Aligned_cols=70  Identities=27%  Similarity=0.878  Sum_probs=61.6

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCC--cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCT--LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce--~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      ++++|. .+|.++|+|++    ++|.|++||.|..|+  +++| .++|.++|+| .+..++|.|.|++||+|..|+..+
T Consensus        44 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C-~~~~g~~~C~C~~G~~G~~C~~~i  121 (135)
T 2vj3_A           44 DVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRC-LDKINEFQCECPTGFTGHLCQVDL  121 (135)
T ss_dssp             ECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCSTTTCEE-EECSSCEEEECCTTEESSSSCEEC
T ss_pred             cCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcCCCCEe-ECCCCCeEEECCCCCcCCccCccC
Confidence            356785 58999999986    599999999999997  5789 7899999999 677889999999999999998765

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.98  E-value=2.2e-10  Score=107.57  Aligned_cols=94  Identities=30%  Similarity=0.663  Sum_probs=72.0

Q ss_pred             CCCCCcEEecceEeeCCCCcCCCCCcC-----------CC-----CCCCCCCcEEecCCCCCceEEcCCC------CCCC
Q psy10559         13 WCNEHGQCKNGTCLCVTGWNGKHCTLE-----------GC-----PNSCSNHGQCRVNSDSQWECKCSDG------WDGK   70 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~G~~Ce~~-----------~C-----~~~C~~~G~C~~~~~g~~~C~C~~G------~~G~   70 (418)
                      .|+++|+|..+.|.|.+||.|.+|+.+           .|     ..+|+++|+| ..    +.|.|.+|      |+|.
T Consensus        97 ~Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C-~~----g~C~C~~gw~~~~~~~G~  171 (217)
T 2p28_B           97 LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC-VC----GQCLCHTSDVPGKLIYGQ  171 (217)
T ss_dssp             TTTTSEEEETTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEE-ET----TEEEECCCCSTTCCEEST
T ss_pred             ccCCCceEECCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEE-eC----CceECCCCCCCcccEECC
Confidence            699999999999999999999999843           36     2569999999 43    38999999      4899


Q ss_pred             CCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCC--CccccCCCCCCceeecCCCCccccccce
Q psy10559         71 DCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSS--QLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        71 ~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~--~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      .|+... ..              |...   ...+|.++  ++|..  +     .|.|.+||+|..|+.
T Consensus       172 ~Ce~~~-~~--------------C~~~---~g~~C~~~~~G~C~~--g-----~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          172 YCECDT-IN--------------CERY---NGQVCGGPGRGLCFC--G-----KCRCHPGFEGSACQH  214 (217)
T ss_dssp             TSCEES-SC--------------SCEE---TTEETTCTTTEEEET--T-----EEEECTTEESTTSCE
T ss_pred             CcccCC-cc--------------CCCC---CCCCCCCCCCcEEeC--C-----eeECCCCCccCCcCC
Confidence            998533 11              2110   12257777  88885  2     699999999999986

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.97  E-value=8.6e-10  Score=95.77  Aligned_cols=69  Identities=28%  Similarity=0.750  Sum_probs=59.9

Q ss_pred             ccCCC-cCCCCCcEEe-----------cceEeeCCCCcCCCCC--cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559          7 IDVDL-LWCNEHGQCK-----------NGTCLCVTGWNGKHCT--LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus         7 id~C~-~pC~n~G~C~-----------~g~C~C~~G~~G~~Ce--~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      +++|. .+|.++|+|+           .+.|.|++||+|..|+  +++| .++|.++++| ++..++|.|.|++||+|..
T Consensus        52 ~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C-~~~~g~~~C~C~~G~~G~~  130 (143)
T 4d90_A           52 AGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGIC-TDLVANYSCECPGEFMGRN  130 (143)
T ss_dssp             CCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEE-EEETTEEEEECCTTCBSTT
T ss_pred             CCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEe-ECCCCCeEeECCCCCccCC
Confidence            45675 4899999998           3699999999999996  6789 8899999999 6778999999999999999


Q ss_pred             CCccc
Q psy10559         72 CSVLL   76 (418)
Q Consensus        72 C~~~~   76 (418)
                      |+...
T Consensus       131 c~~~~  135 (143)
T 4d90_A          131 CQYKG  135 (143)
T ss_dssp             SCBC-
T ss_pred             ceecC
Confidence            98654

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.89  E-value=1.4e-09  Score=117.66  Aligned_cols=90  Identities=26%  Similarity=0.610  Sum_probs=67.3

Q ss_pred             CCcEEecceEeeCCCCcCCCCCc----------CCC-C----CCCCCCcEEecCCCCCceEEcC----CCCCCCCCCccc
Q psy10559         16 EHGQCKNGTCLCVTGWNGKHCTL----------EGC-P----NSCSNHGQCRVNSDSQWECKCS----DGWDGKDCSVLL   76 (418)
Q Consensus        16 n~G~C~~g~C~C~~G~~G~~Ce~----------~~C-~----~~C~~~G~C~~~~~g~~~C~C~----~G~~G~~C~~~~   76 (418)
                      ++|.|..|.|.|.+||.|.+|+.          +.| .    .+|+++|+| .+    +.|.|.    +||+|..|+...
T Consensus       451 g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C-~~----g~C~C~~~~~~Gy~G~~Ce~~~  525 (690)
T 3fcs_B          451 GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGEC-LC----GQCVCHSSDFGKITGKYCECDD  525 (690)
T ss_dssp             TSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEE-CS----SSEEECCCSSCCCBSTTSCBCS
T ss_pred             CCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEE-EC----CeeEeecCCCCCeeCCCcCccc
Confidence            34444456799999999999984          348 3    349999999 42    589999    999999998433


Q ss_pred             cccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccc
Q psy10559         77 EQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFE  135 (418)
Q Consensus        77 ~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce  135 (418)
                                     ..|...   ...+|.+++.|.+       +.|.|++||+|..|+
T Consensus       526 ---------------~~C~~~---~~~~C~~~G~C~~-------g~C~C~~Gy~G~~Ce  559 (690)
T 3fcs_B          526 ---------------FSCVRY---KGEMCSGHGQCSC-------GDCLCDSDWTGYYCN  559 (690)
T ss_dssp             ---------------SCCCBS---SSSBGGGSEEEET-------TEEEECTTEESSSSC
T ss_pred             ---------------CcCcCC---CCCCCCCCCEecC-------CeeECcCCCcCCCCc
Confidence                           112100   1246888999976       479999999999998

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.86  E-value=2.4e-10  Score=101.88  Aligned_cols=120  Identities=22%  Similarity=0.430  Sum_probs=79.7

Q ss_pred             cccCCC--cCCCCCcEEec----ceEeeCCCCc----CCCCC-cCC--C---CCCC--CCCcEEecCCCC----CceEEc
Q psy10559          6 NIDVDL--LWCNEHGQCKN----GTCLCVTGWN----GKHCT-LEG--C---PNSC--SNHGQCRVNSDS----QWECKC   63 (418)
Q Consensus         6 ~id~C~--~pC~n~G~C~~----g~C~C~~G~~----G~~Ce-~~~--C---~~~C--~~~G~C~~~~~g----~~~C~C   63 (418)
                      ++|+|.  ++|. +|+|++    ++|.|++||.    |..|+ +++  |   +.+|  .+++.| .+..+    +|.|.|
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C-~~~~~~~~~~~~C~C   79 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTAC-SNEIGVGVSKASCCC   79 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------C-EEEEEEEECHHHHHT
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcc-cCCcCCcccCceeeC
Confidence            689995  5896 799987    7999999998    88997 444  7   2334  457889 55444    799999


Q ss_pred             CCCCC-CCCCCcccc-------ccCCC--CccCCCCCccccCCCCCCCC--CCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559         64 SDGWD-GKDCSVLLE-------QNCND--GKDNDKDGLVDCEDPECCSN--HICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        64 ~~G~~-G~~C~~~~~-------~~C~~--g~c~~~~G~~~C~dpdCc~~--~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                      ++||. |..|+.-..       -.|..  |+-.+.++ ..|.+.++|..  .+|.+ +.|++..+   +|.|.|++||++
T Consensus        80 ~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~-~~c~dideC~~~~~~C~~-g~C~n~~g---sy~C~C~~Gy~g  154 (162)
T 1uzk_A           80 SLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPIT-VILEDIDECQELPGLCQG-GKCINTFG---SFQCRCPTGYYL  154 (162)
T ss_dssp             TTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTT-CCEEECCHHHHCGGGGBT-SEEEECSS---CEEEECCTTCCB
T ss_pred             CCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCC-CccCccccccCCCCCcCC-CEeEcCCC---CEEeeCCCCccC
Confidence            99998 777762110       01322  33222211 34667777754  45985 69999887   899999999988


Q ss_pred             c
Q psy10559        132 S  132 (418)
Q Consensus       132 ~  132 (418)
                      .
T Consensus       155 ~  155 (162)
T 1uzk_A          155 N  155 (162)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.83  E-value=2.1e-09  Score=94.02  Aligned_cols=75  Identities=27%  Similarity=0.701  Sum_probs=60.7

Q ss_pred             ccccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc--CCC-CCCCCCCc---EEecCCCC-CceEEcCCCCC----
Q psy10559          5 SNIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL--EGC-PNSCSNHG---QCRVNSDS-QWECKCSDGWD----   68 (418)
Q Consensus         5 ~~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~--~~C-~~~C~~~G---~C~~~~~g-~~~C~C~~G~~----   68 (418)
                      .++++|. ++|.++|+|++    ++|.|++||+|..|+.  +.| ..+|.+++   +| .+..+ +|.|.|++||+    
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C-~~~~g~~y~C~C~~Gy~l~~d  123 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYC-SDHTGTKRSCRCHEGYSLLAD  123 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEE-ECCTTSCCEEECCTTEEECTT
T ss_pred             CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEe-ECCCCCCEEEECCCCceECCC
Confidence            4688995 59999999986    6999999999999984  566 45566666   99 67788 99999999999    


Q ss_pred             CCCCCccccccC
Q psy10559         69 GKDCSVLLEQNC   80 (418)
Q Consensus        69 G~~C~~~~~~~C   80 (418)
                      |..|+...+.+|
T Consensus       124 G~~C~~~~e~pC  135 (142)
T 2c4f_L          124 GVSCTPTVEYPC  135 (142)
T ss_dssp             SSCEEESSSSCT
T ss_pred             CCCCCCCCccCC
Confidence            888876554333

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.82  E-value=1.1e-11  Score=119.49  Aligned_cols=122  Identities=11%  Similarity=0.044  Sum_probs=85.5

Q ss_pred             ccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCcC--C------C------------------------CCCCCCCc
Q psy10559          7 IDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTLE--G------C------------------------PNSCSNHG   49 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~--~------C------------------------~~~C~~~G   49 (418)
                      .++|. .||.++|+|++    |+|+|++||+|++|+.+  +      |                        ..+|.++|
T Consensus        99 ~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg  178 (267)
T 4fbr_A           99 NIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGG  178 (267)
T ss_dssp             CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTT
T ss_pred             ccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCC
Confidence            34674 48999999987    79999999999999731  1      1                        33588899


Q ss_pred             EEecCCCCCceEEcCCCCCCCCCCccccc-----cCCCCccCCCCCccc-cCCCC--CCCCCCCCCCCccccCCCCCCce
Q psy10559         50 QCRVNSDSQWECKCSDGWDGKDCSVLLEQ-----NCNDGKDNDKDGLVD-CEDPE--CCSNHICRSSQLCVSAPKPIDIL  121 (418)
Q Consensus        50 ~C~~~~~g~~~C~C~~G~~G~~C~~~~~~-----~C~~g~c~~~~G~~~-C~dpd--Cc~~~~C~~~~~C~~~~~~~~~~  121 (418)
                      +| ++..++|+|.|++||+|..|+..+..     .|....+.++-..+. |.+..  .....+|.++++|++...   .|
T Consensus       179 ~C-~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~---sy  254 (267)
T 4fbr_A          179 KT-LSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTM---IY  254 (267)
T ss_dssp             SE-EEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEE---EE
T ss_pred             Ee-eCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCc---ce
Confidence            99 77788999999999999999987742     233333333211111 11110  011236889999998544   89


Q ss_pred             eecCCCCcccc
Q psy10559        122 LRKQPPAITAS  132 (418)
Q Consensus       122 ~C~C~~G~~g~  132 (418)
                      .|.||+||+|.
T Consensus       255 ~CeCp~GF~G~  265 (267)
T 4fbr_A          255 NGEGPIGFRAR  265 (267)
T ss_dssp             TTSCCEEEEEE
T ss_pred             eecCCCCcccc
Confidence            99999999983

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.78  E-value=4.6e-09  Score=92.52  Aligned_cols=74  Identities=30%  Similarity=0.694  Sum_probs=56.0

Q ss_pred             ccccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCC-cCCC-C--CCCCCCcEEecCCCCCceEEcCCCCC----CCC
Q psy10559          5 SNIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCT-LEGC-P--NSCSNHGQCRVNSDSQWECKCSDGWD----GKD   71 (418)
Q Consensus         5 ~~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce-~~~C-~--~~C~~~G~C~~~~~g~~~C~C~~G~~----G~~   71 (418)
                      .++++|. +||.++|+|++    ++|.|++||+|..|+ +++| .  .+|.+  +|..+..++|.|.|++||+    |..
T Consensus        46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~  123 (146)
T 1x7a_L           46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKS  123 (146)
T ss_dssp             ----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSS
T ss_pred             CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCc
Confidence            4688995 59999999986    699999999999998 5678 3  35664  7844668899999999999    888


Q ss_pred             CCccccccC
Q psy10559         72 CSVLLEQNC   80 (418)
Q Consensus        72 C~~~~~~~C   80 (418)
                      |+...+.+|
T Consensus       124 C~~~~~~pC  132 (146)
T 1x7a_L          124 CKPAVPFPC  132 (146)
T ss_dssp             EEECSSSCT
T ss_pred             CCCCCCCCC
Confidence            876554333

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.77  E-value=1.8e-09  Score=116.62  Aligned_cols=95  Identities=27%  Similarity=0.611  Sum_probs=73.1

Q ss_pred             cCCCCCcEEecceEeeCCCCcCCCCCc--C---------CC-CC----CCCCCcEEecCCCCCceEEcC------CCCCC
Q psy10559         12 LWCNEHGQCKNGTCLCVTGWNGKHCTL--E---------GC-PN----SCSNHGQCRVNSDSQWECKCS------DGWDG   69 (418)
Q Consensus        12 ~pC~n~G~C~~g~C~C~~G~~G~~Ce~--~---------~C-~~----~C~~~G~C~~~~~g~~~C~C~------~G~~G   69 (418)
                      ++|.++|+|..|.|.|.+||.|.+|+.  .         .| ..    +|+++|.|. .    +.|.|.      +||.|
T Consensus       435 ~~Cs~~G~C~~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~----G~C~C~~~~~~~~G~~G  509 (687)
T 3k6s_B          435 SLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-C----GQCLCHTSDVPGKLIYG  509 (687)
T ss_dssp             STGGGSEEESSSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-T----TEEEECCCCSTTCCEES
T ss_pred             CCCCCCCEEeCCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-C----CEEEcCCCCCCCCCccc
Confidence            379999999999999999999999983  1         48 32    499999994 2    399999      99999


Q ss_pred             CCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCC--CCccccCCCCCCceeecCCCCccccccce
Q psy10559         70 KDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRS--SQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        70 ~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~--~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      ..|+... .              .|...   ...+|.+  ++.|.+  +     .|.|.+||+|..|+.
T Consensus       510 ~~Ce~~~-~--------------~C~~~---~~~~C~~~~~G~C~~--g-----~C~C~~G~~G~~Cec  553 (687)
T 3k6s_B          510 QYCECDT-I--------------NCERY---NGQVCGGPGRGLCFC--G-----KCRCHPGFEGSACQC  553 (687)
T ss_dssp             TTSCEES-S--------------CSCEE---TTEETSHHHHEEEET--T-----EEEECTTCCSTTSCS
T ss_pred             ccccccc-c--------------cccCC---CCcCcCCCCCCeEEC--C-----EEEcCCCCcCCCCcc
Confidence            9998533 1              12110   1235777  888874  2     699999999999983

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.76  E-value=5.7e-09  Score=87.88  Aligned_cols=65  Identities=29%  Similarity=0.761  Sum_probs=47.5

Q ss_pred             CcccccCCC-cC--------CCCCcEEec----ceEeeCCCCcCCCCCc----CCCC-C--CCCCCcEEecCCCCCceEE
Q psy10559          3 GFSNIDVDL-LW--------CNEHGQCKN----GTCLCVTGWNGKHCTL----EGCP-N--SCSNHGQCRVNSDSQWECK   62 (418)
Q Consensus         3 Gf~~id~C~-~p--------C~n~G~C~~----g~C~C~~G~~G~~Ce~----~~C~-~--~C~~~G~C~~~~~g~~~C~   62 (418)
                      -|.++|+|. +|        |.++|+|++    ++|.|++||+|..|+.    ++|. +  .|..  +| .+..++|.|.
T Consensus         2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C-~n~~g~y~C~   78 (114)
T 1aut_L            2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YC-LEEVGWRRCS   78 (114)
T ss_dssp             ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EE-EECSSSEEEE
T ss_pred             cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--Ee-ECCCCCEEeE
Confidence            367888995 47        999999986    6999999999999983    2462 2  3432  89 7788999999


Q ss_pred             cCCCCCCC
Q psy10559         63 CSDGWDGK   70 (418)
Q Consensus        63 C~~G~~G~   70 (418)
                      |++||+|.
T Consensus        79 C~~G~~~~   86 (114)
T 1aut_L           79 CAPGYKLG   86 (114)
T ss_dssp             CCTTEEEC
T ss_pred             CCCCeeEC
Confidence            99999853

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.72  E-value=1.8e-09  Score=99.81  Aligned_cols=70  Identities=31%  Similarity=0.777  Sum_probs=27.7

Q ss_pred             cccccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc---CCC-C--CCCCCCcEEecCCCCCceEEcCCCCC----
Q psy10559          4 FSNIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL---EGC-P--NSCSNHGQCRVNSDSQWECKCSDGWD----   68 (418)
Q Consensus         4 f~~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~---~~C-~--~~C~~~G~C~~~~~g~~~C~C~~G~~----   68 (418)
                      +.++++|. +||.++|+|++    ++|.|++||+|..|+.   +.| .  .+|.+  .| .+..++|.|.|++||+    
T Consensus        39 c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C-~n~~gsy~C~C~~Gy~l~~d  115 (195)
T 1nfu_B           39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FC-HEEQNSVVCSCARGYTLADN  115 (195)
T ss_dssp             ------------------------------------------CCGGGTGGGGCSS--EE-EEETTEEEEECCTTEEECTT
T ss_pred             CCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--Ee-ECCCCCeEEECCCCceeCCC
Confidence            34788995 59999999986    6999999999999984   569 3  45764  89 7778999999999999    


Q ss_pred             CCCCCccc
Q psy10559         69 GKDCSVLL   76 (418)
Q Consensus        69 G~~C~~~~   76 (418)
                      |..|+...
T Consensus       116 G~~C~~~~  123 (195)
T 1nfu_B          116 GKACIPTG  123 (195)
T ss_dssp             SSCEEESS
T ss_pred             CCccccCC
Confidence            88887544

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.66  E-value=1.4e-08  Score=80.60  Aligned_cols=64  Identities=34%  Similarity=0.817  Sum_probs=54.1

Q ss_pred             ccccCCC--cCCCCCcEEec----ceEeeCCCCc--CCCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559          5 SNIDVDL--LWCNEHGQCKN----GTCLCVTGWN--GKHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus         5 ~~id~C~--~pC~n~G~C~~----g~C~C~~G~~--G~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      .++++|.  ++|.+ |+|++    ++|.|++||.  |..|+ +++|  .++|.+ |+| .+..++|.|.|++||.|..
T Consensus         3 ~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C-~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A            3 VDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTC-KNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             CCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCE-EECSSSEEECCSSSSCCCS
T ss_pred             CccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEe-ECCCCCEEeECCCCeEeCC
Confidence            4688995  58974 99986    6999999997  99997 7789  578985 699 7889999999999999854

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.65  E-value=1.7e-08  Score=81.77  Aligned_cols=70  Identities=23%  Similarity=0.583  Sum_probs=54.7

Q ss_pred             CCcc----cccCCC-cCCCCCcEEecceEeeCCCCcCCCCC---cCCC-CCCCCCCcEEecCCC--CCceEEcCCCCCCC
Q psy10559          2 RGFS----NIDVDL-LWCNEHGQCKNGTCLCVTGWNGKHCT---LEGC-PNSCSNHGQCRVNSD--SQWECKCSDGWDGK   70 (418)
Q Consensus         2 ~Gf~----~id~C~-~pC~n~G~C~~g~C~C~~G~~G~~Ce---~~~C-~~~C~~~G~C~~~~~--g~~~C~C~~G~~G~   70 (418)
                      .||.    ++++|. .||.+..  ..++|.|++||+  .|+   ++.| +++|.++|+| .+..  ++|.|.|++||+|.
T Consensus         8 ~g~~g~~c~~~~c~~~pC~n~~--~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C-~~~~~~~~~~C~C~~G~~G~   82 (91)
T 1tpg_A            8 DEKTQMIYQQHQSWLRPVLRSN--RVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTC-QQALYFSDFVCQCPEGFAGK   82 (91)
T ss_dssp             CSSSCCBCCSSCEEEEECSSSS--CEEEEECSSSCC--BCCEECEEECSSCCSCTTCEE-EEESSSSCEEEECCTTCBSS
T ss_pred             CCCcCCeECCCcccCCccccCC--CCcEeECCCCCc--ccccCcCCcccCCCCCCCCEe-ecCCCCCCeEeECCCCCcCC
Confidence            4565    356663 4676542  137999999998  896   5789 8899999999 5544  88999999999999


Q ss_pred             CCCccc
Q psy10559         71 DCSVLL   76 (418)
Q Consensus        71 ~C~~~~   76 (418)
                      .|+..+
T Consensus        83 ~Ce~~i   88 (91)
T 1tpg_A           83 SCEIDT   88 (91)
T ss_dssp             SCCBCS
T ss_pred             cCCcCC
Confidence            999665

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.63  E-value=4.5e-09  Score=91.13  Aligned_cols=73  Identities=32%  Similarity=0.760  Sum_probs=29.5

Q ss_pred             ccccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc---CCC-C--CCCCCCcEEecCCCCCceEEcCCCCC----C
Q psy10559          5 SNIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL---EGC-P--NSCSNHGQCRVNSDSQWECKCSDGWD----G   69 (418)
Q Consensus         5 ~~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~---~~C-~--~~C~~~G~C~~~~~g~~~C~C~~G~~----G   69 (418)
                      .++++|. ++|.++|+|++    ++|.|++||+|..|+.   +.| .  .+|.+  +| .+..++|.|.|++||+    |
T Consensus        40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C-~~~~g~y~C~C~~Gy~l~~~g  116 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FC-HEEQNSVVCSCARGYTLADNG  116 (134)
T ss_dssp             -----------------------------------------CCGGGTGGGGCSS--EE-EEETTEEEEECCTTEEECTTS
T ss_pred             CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--Ee-ECCCCCEEEECCCCcEECCCC
Confidence            4688995 59999999976    6999999999999984   568 3  35764  89 6778899999999999    8


Q ss_pred             CCCCccccccC
Q psy10559         70 KDCSVLLEQNC   80 (418)
Q Consensus        70 ~~C~~~~~~~C   80 (418)
                      ..|+...+.+|
T Consensus       117 ~~C~~~~~~pC  127 (134)
T 2vh0_B          117 KACIPTGPYPC  127 (134)
T ss_dssp             SCEEESSSSCT
T ss_pred             CccCcCCCcCC
Confidence            88876554444

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.63  E-value=1.1e-09  Score=96.09  Aligned_cols=99  Identities=27%  Similarity=0.512  Sum_probs=63.1

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCcC----------------CC---CCCCCCCcEEecCCCC----
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTLE----------------GC---PNSCSNHGQCRVNSDS----   57 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~----------------~C---~~~C~~~G~C~~~~~g----   57 (418)
                      ++|+|. +||.+ |+|++    ++|.|++||+|..+...                .|   .+.|..+..| .+..+    
T Consensus         3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C-~~~~g~~~g   80 (147)
T 2w86_A            3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQC-CSSLGAAWG   80 (147)
T ss_dssp             CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHH-HTTTCSEET
T ss_pred             cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCcc-ccCcCcccC
Confidence            689996 59975 79986    69999999998755310                01   0111111112 11111    


Q ss_pred             ------CceEEcCCCCC---CCCCCccccccCCCCccCCCCCccccCCCCCCC--CCCCCCCCccccCCCCCCceeecCC
Q psy10559         58 ------QWECKCSDGWD---GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS--NHICRSSQLCVSAPKPIDILLRKQP  126 (418)
Q Consensus        58 ------~~~C~C~~G~~---G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~--~~~C~~~~~C~~~~~~~~~~~C~C~  126 (418)
                            .|.|.|++||+   |..|+                      +.+.|.  ..+|.+ ++|++..+   +|.|.|+
T Consensus        81 ~~C~~c~~~C~C~~Gy~~~~g~~C~----------------------dideC~~~~~~C~~-g~C~n~~g---~y~C~C~  134 (147)
T 2w86_A           81 SPCTLCQVDPICGKGYSRIKGTQCE----------------------DIDECEVFPGVCKN-GLCVNTRG---SFKCQCP  134 (147)
T ss_dssp             TTTEECCCCTTTCTTEEEEETTEEE----------------------ECCHHHHSTTCSSS-SEEEEETT---EEEEECC
T ss_pred             CCcccCCCcccCCCccccCCCCccC----------------------ccccccCCCCCCCC-CEEECCCC---CEEeeCC
Confidence                  15667777774   55554                      445554  345885 49999887   8999999


Q ss_pred             CCcccc
Q psy10559        127 PAITAS  132 (418)
Q Consensus       127 ~G~~g~  132 (418)
                      +||++.
T Consensus       135 ~Gy~g~  140 (147)
T 2w86_A          135 SGMTLD  140 (147)
T ss_dssp             TTCCBC
T ss_pred             CCCccC
Confidence            999884

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.61  E-value=5.2e-09  Score=108.59  Aligned_cols=64  Identities=31%  Similarity=0.885  Sum_probs=29.7

Q ss_pred             ccCCCcCCCCCcEEec-ceEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559          7 IDVDLLWCNEHGQCKN-GTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus         7 id~C~~pC~n~G~C~~-g~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .++|..+|.| |+|.+ ++|.|.+||+|..|+++.|..+|.++|+| .+   .+.|.|.+||+|..|+..
T Consensus       392 ~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C-~~---~~~C~C~~G~~G~~C~~~  456 (463)
T 2wg3_C          392 TSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVC-VR---PNKCLCKKGYLGPQCEQV  456 (463)
T ss_dssp             CCHHHHHCCS-EEECTTSCEEECTTEESTTSCEECC----------------------------------
T ss_pred             cccccCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEE-CC---CCEEECCCCcccCCCCCC
Confidence            4567667986 99987 89999999999999988996699999999 43   268999999999999854

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.60  E-value=2.7e-08  Score=86.57  Aligned_cols=67  Identities=24%  Similarity=0.757  Sum_probs=56.7

Q ss_pred             cccCCCc----CCCCCcEEec----ceEeeCCCCcCC------------CCC-cCCC---CCCCCCCcEEecCCCCCceE
Q psy10559          6 NIDVDLL----WCNEHGQCKN----GTCLCVTGWNGK------------HCT-LEGC---PNSCSNHGQCRVNSDSQWEC   61 (418)
Q Consensus         6 ~id~C~~----pC~n~G~C~~----g~C~C~~G~~G~------------~Ce-~~~C---~~~C~~~G~C~~~~~g~~~C   61 (418)
                      ++++|..    +|.++++|++    ++|.|++||.|.            .|+ +++|   .++|.++++| ++..++|.|
T Consensus        43 dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C-~n~~g~y~C  121 (143)
T 2bou_A           43 DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVC-FNTVGSYSC  121 (143)
T ss_dssp             ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEE-EECSSCEEE
T ss_pred             ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEE-ECCCCCEEe
Confidence            4778853    7999999986    699999999987            554 6778   3789999999 788999999


Q ss_pred             EcCCCCCCCCCC
Q psy10559         62 KCSDGWDGKDCS   73 (418)
Q Consensus        62 ~C~~G~~G~~C~   73 (418)
                      .|++||+|..+.
T Consensus       122 ~C~~Gy~g~~~~  133 (143)
T 2bou_A          122 RCRPGWKPRHGI  133 (143)
T ss_dssp             ECCSSSCBCTTC
T ss_pred             eCCCCcccCCCC
Confidence            999999997765

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.56  E-value=5.1e-08  Score=100.05  Aligned_cols=93  Identities=22%  Similarity=0.493  Sum_probs=69.4

Q ss_pred             eEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCC
Q psy10559         24 TCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH  103 (418)
Q Consensus        24 ~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~  103 (418)
                      .|.|.+||.|..|+. .| .+|.++|+| .+  +.+.|.|++||+|..|+..    |..++-.     ..|.+ .|...+
T Consensus       186 ~c~C~~g~~G~~C~~-~C-~~C~~~G~C-~~--~~g~C~C~~G~~G~~Ce~~----C~~g~~g-----~~C~~-~C~~~~  250 (423)
T 2gy5_A          186 VRRCEAQKWGPECNH-LC-TACMNNGVC-HE--DTGECICPPGFMGRTCEKA----CELHTFG-----RTCKE-RCSGQE  250 (423)
T ss_dssp             ECSSCTTEESTTSCE-EC-CCCCTTCEE-CT--TTCCEECCTTEESTTSCEE----CCTTEES-----TTSCE-ECCSTT
T ss_pred             CCcCCCCCCCCCCCC-CC-CCCCCCCEE-EC--CCCcEeCCCCccCCCcccc----cCCCCCC-----CCcCc-cCCCCC
Confidence            689999999999985 46 379999999 43  4679999999999999853    4333211     12332 344466


Q ss_pred             CCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        104 ICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       104 ~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      .|.+++.|...     .+.|.|++||+|..|+.
T Consensus       251 ~C~~~g~C~~~-----~~~C~C~~G~~G~~C~~  278 (423)
T 2gy5_A          251 GCKSYVFCLPD-----PYGCSCATGWKGLQCNE  278 (423)
T ss_dssp             TTTTCCEEETT-----TTEEECCBTCBSGGGCB
T ss_pred             CCCCCCEECCC-----CCeEEeCCCcccccccC
Confidence            78888888532     46899999999999986

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.54  E-value=2.4e-08  Score=80.02  Aligned_cols=65  Identities=32%  Similarity=0.713  Sum_probs=54.3

Q ss_pred             cccCCCc-C--CCCCcEEec----ceEeeCCCCc----CCCCC-cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559          6 NIDVDLL-W--CNEHGQCKN----GTCLCVTGWN----GKHCT-LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus         6 ~id~C~~-p--C~n~G~C~~----g~C~C~~G~~----G~~Ce-~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      ++++|.. +  | ++++|.+    ++|.|++||.    |..|+ +++| .++|.  ++| .+..++|.|.|+ ||.|..|
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C-~n~~g~y~C~C~-g~~G~~~   76 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLC-VNYPGGYTCYCD-GKKGFKL   76 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEE-CCCSSSCCEECC-SSSCCBC
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEE-EccCCCEEEECC-CCcCCcc
Confidence            6789953 4  9 8899986    6999999998    88896 6789 78897  799 788999999998 8888777


Q ss_pred             Ccc
Q psy10559         73 SVL   75 (418)
Q Consensus        73 ~~~   75 (418)
                      +..
T Consensus        77 ~~~   79 (87)
T 1z6c_A           77 AQD   79 (87)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            643

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.53  E-value=5.2e-08  Score=95.35  Aligned_cols=64  Identities=25%  Similarity=0.798  Sum_probs=53.4

Q ss_pred             cccccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCC--cCCC-C---CCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559          4 FSNIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCT--LEGC-P---NSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus         4 f~~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce--~~~C-~---~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      |.++++|. +||.|+|+|.+    ++|.|++||.|..|+  +++| .   ++|.+  .| .+..++|.|.|++||.|.
T Consensus         2 ~~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C-~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B            2 YKGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FC-LPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             ----CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EE-ECCSSSCEEECCTTEECC
T ss_pred             CccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--cc-ccCCCeeEEecccccccc
Confidence            67889996 59999999986    699999999999997  6789 4   68986  89 788999999999999874

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.51  E-value=4.2e-08  Score=78.34  Aligned_cols=63  Identities=32%  Similarity=0.837  Sum_probs=51.1

Q ss_pred             cccCCCc---CCCCCcEEec----ceEeeCCCCc-----CCCCC-cCCC-CCC--CCCCcEEecCCCCCceEEcCCCCCC
Q psy10559          6 NIDVDLL---WCNEHGQCKN----GTCLCVTGWN-----GKHCT-LEGC-PNS--CSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus         6 ~id~C~~---pC~n~G~C~~----g~C~C~~G~~-----G~~Ce-~~~C-~~~--C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      ++|+|..   +|. +|+|++    ++|.|++||.     |..|+ +++| .++  |. +++| .+..++|.|.|++||.|
T Consensus         2 dideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C-~n~~g~y~C~C~~G~~~   78 (86)
T 1lmj_A            2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVC-HNTEGSYRCECPPGHQL   78 (86)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEE-EEETTEEEEESCTTSCC
T ss_pred             ccccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEe-EcCCCCEEEECcCCccc
Confidence            6899953   495 569986    6999999998     78886 7788 444  76 5899 78899999999999987


Q ss_pred             CC
Q psy10559         70 KD   71 (418)
Q Consensus        70 ~~   71 (418)
                      ..
T Consensus        79 ~~   80 (86)
T 1lmj_A           79 SP   80 (86)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.51  E-value=1.3e-08  Score=105.62  Aligned_cols=79  Identities=24%  Similarity=0.518  Sum_probs=39.4

Q ss_pred             eEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCC
Q psy10559         24 TCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNH  103 (418)
Q Consensus        24 ~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~  103 (418)
                      .+.|..+|.|..|+.+.|..+|.+ |+| .+   .+.|.|.+||+|..|+...                 |      .. 
T Consensus       378 p~~C~~~~~g~~c~~~~C~~~C~n-G~C-~~---~~~C~C~~G~~G~~C~~~~-----------------C------~~-  428 (463)
T 2wg3_C          378 PEECRATVQPAQTLTSECSRLCRN-GYC-TP---TGKCCCSPGWEGDFCRTAK-----------------C------EP-  428 (463)
T ss_dssp             CGGGCCCCCCCCCCCCHHHHHCCS-EEE-CT---TSCEEECTTEESTTSCEEC-----------------C---------
T ss_pred             cccCCCCCcCCCCccccccCCCCC-Ccc-CC---CCeECCCCCcCCCcCCcCc-----------------C------CC-
Confidence            468899999999999899557986 999 43   3489999999999997322                 2      12 


Q ss_pred             CCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559        104 ICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus       104 ~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +|.++++|+..      +.|.|++||+|..|+..
T Consensus       429 ~C~~~g~C~~~------~~C~C~~G~~G~~C~~~  456 (463)
T 2wg3_C          429 ACRHGGVCVRP------NKCLCKKGYLGPQCEQV  456 (463)
T ss_dssp             ----------------------------------
T ss_pred             CCCCCCEECCC------CEEECCCCcccCCCCCC
Confidence            78899999864      47999999999999863

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.47  E-value=1.2e-07  Score=75.12  Aligned_cols=67  Identities=28%  Similarity=0.766  Sum_probs=52.6

Q ss_pred             cCCC--CCCCCCCcEEecCCCCCceEEcCCCCC--CCCCCccccccCCCCccCCCCCccccCCCCCCC-CCCCCCCCccc
Q psy10559         38 LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWD--GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS-NHICRSSQLCV  112 (418)
Q Consensus        38 ~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~--G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C~  112 (418)
                      +++|  +++|. +|+| ++..++|.|.|++||.  |..|+                      +.+.|. ..+|.+ +.|+
T Consensus         5 ideC~~~~~C~-~g~C-~n~~g~y~C~C~~Gy~~~g~~C~----------------------dideC~~~~~C~~-~~C~   59 (82)
T 1emn_A            5 MDECKEPDVCK-HGQC-INTDGSYRCECPFGYILAGNECV----------------------DTDECSVGNPCGN-GTCK   59 (82)
T ss_dssp             CCSSSSTTSCS-SSEE-CCCSSCCCEECCTTEEEETTEEE----------------------ECCGGGTCCTTSS-SCEE
T ss_pred             cccCCCCCCcC-CCEE-EecCCCEEEECCCCeECCCCccC----------------------CcccccCCCCCCC-CEeE
Confidence            5678  37897 4899 7888999999999997  66663                      334443 567876 5899


Q ss_pred             cCCCCCCceeecCCCCcccc
Q psy10559        113 SAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       113 ~~~~~~~~~~C~C~~G~~g~  132 (418)
                      +..+   .|.|.|++||+|.
T Consensus        60 n~~g---~y~C~C~~G~~g~   76 (82)
T 1emn_A           60 NVIG---GFECTCEEGFEPG   76 (82)
T ss_dssp             ECSS---SEEECCSSSSCCC
T ss_pred             CCCC---CEEeECCCCeEeC
Confidence            9887   8999999999883

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.43  E-value=1.3e-07  Score=83.19  Aligned_cols=75  Identities=27%  Similarity=0.621  Sum_probs=54.4

Q ss_pred             CCC-cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCC-CCCCCCCCcc
Q psy10559         35 HCT-LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS-NHICRSSQLC  111 (418)
Q Consensus        35 ~Ce-~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C  111 (418)
                      .|. +++| +++|.++|+| ++..++|.|.|++||+|..|+...  .                   |.. ...|.+  .|
T Consensus        44 ~c~dideC~~~pC~n~g~C-~~~~~~y~C~C~~G~~G~~C~~~d--e-------------------C~~~~~~C~~--~C   99 (146)
T 1x7a_L           44 QYVDGDQCEPNPCLNGGLC-KDDINSYECWCQVGFEGKNCELDA--T-------------------CNIKNGRCKQ--FC   99 (146)
T ss_dssp             ------CCSSCSSCTTCEE-EECSSCEEEECCSSEESTTTCEEC--C-------------------TTSGGGSCSS--BC
T ss_pred             cCCCcCcCCCCCCCCCCEe-ECCCCCEEEecCCCCcCCcCCCCc--c-------------------ccCCCCCCcC--CC
Confidence            353 6789 8999999999 777889999999999999997431  1                   111 124554  78


Q ss_pred             -ccCCCCCCceeecCCCCcc----ccccce
Q psy10559        112 -VSAPKPIDILLRKQPPAIT----ASFFER  136 (418)
Q Consensus       112 -~~~~~~~~~~~C~C~~G~~----g~~Ce~  136 (418)
                       ++..+   .|.|.|++||+    |..|+.
T Consensus       100 ~~n~~g---~y~C~C~~Gy~l~~dG~~C~~  126 (146)
T 1x7a_L          100 KTGADS---KVLCSCTTGYRLAPDQKSCKP  126 (146)
T ss_dssp             CCCSSS---CCCCBCCTTEEECTTSSSEEE
T ss_pred             CCCCCC---CEEeEcCCCcEeCCCCCcCCC
Confidence             77766   89999999999    777764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.42  E-value=1.2e-07  Score=85.14  Aligned_cols=89  Identities=35%  Similarity=0.908  Sum_probs=66.3

Q ss_pred             CCcccc----cCCCcCCC-CCcEEec-ceEeeCCCCcCCCCCcCCC-CCC-CCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559          2 RGFSNI----DVDLLWCN-EHGQCKN-GTCLCVTGWNGKHCTLEGC-PNS-CSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus         2 ~Gf~~i----d~C~~pC~-n~G~C~~-g~C~C~~G~~G~~Ce~~~C-~~~-C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      .||++.    +.|.+.|. .+|.|.+ ++|.|.+||.|..|+.  | ..+ |. +|+| .   +.|.|.|.+||+|..|+
T Consensus        56 ~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~~--C~~~~~C~-~g~C-~---~~~~C~C~~G~~G~~C~  128 (169)
T 2vj2_A           56 EGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDK--CIPHPGCV-HGIC-N---EPWQCLCETNWGGQLCD  128 (169)
T ss_dssp             TTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSCE--ECCCTTCS-SEEC-S---STTCCEECTTEETTTTC
T ss_pred             CCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCccc--CCCCCCCC-CCCc-C---CCCEEeCCCCCCCCccc
Confidence            577653    35666787 7889975 8999999999999974  5 333 77 5699 3   56899999999999998


Q ss_pred             cccc-----ccCC-CCccCCC-CCccccCCC
Q psy10559         74 VLLE-----QNCN-DGKDNDK-DGLVDCEDP   97 (418)
Q Consensus        74 ~~~~-----~~C~-~g~c~~~-~G~~~C~dp   97 (418)
                      ..+.     ..|. ++.|.+. .+.+.|..+
T Consensus       129 ~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~  159 (169)
T 2vj2_A          129 KDLNYCGTHQPCLNGGTCSNTGPDKYQCSCP  159 (169)
T ss_dssp             EESCHHHHTCCCCTTCEEEECSTTCEEEECC
T ss_pred             CCCCCCCCCCCCCCCCEEcCCCCCCcEeECC
Confidence            5541     4675 5788775 677777543

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.41  E-value=4.4e-08  Score=90.41  Aligned_cols=83  Identities=20%  Similarity=0.532  Sum_probs=24.3

Q ss_pred             CCcCCCCCcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCC
Q psy10559         30 GWNGKHCTLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSS  108 (418)
Q Consensus        30 G~~G~~Ce~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~  108 (418)
                      +|.+.-..++.| +++|.++|+| .+..++|.|.|++||+|..|+..+...              |..    ....|.+ 
T Consensus        34 ~fw~~c~dideC~~~pC~ngg~C-~n~~g~y~C~C~~Gf~G~~Ce~~i~de--------------C~~----~~~~C~~-   93 (195)
T 1nfu_B           34 EFWNKYKDGDQCETSPCQNQGKC-KDGLGEYTCTCLEGFEGKNCELFTRKL--------------CSL----DNGDCDQ-   93 (195)
T ss_dssp             ------------------------------------------------CCG--------------GGT----GGGGCSS-
T ss_pred             cccccCCCCcccCCCCCCCCCEe-ECCCCCeeEeCCCCceecccccccccc--------------ccC----CCCCCCC-
Confidence            344433357889 8899999999 777899999999999999998543111              111    0234654 


Q ss_pred             CccccCCCCCCceeecCCCCcc----ccccce
Q psy10559        109 QLCVSAPKPIDILLRKQPPAIT----ASFFER  136 (418)
Q Consensus       109 ~~C~~~~~~~~~~~C~C~~G~~----g~~Ce~  136 (418)
                       .|++..+   .|.|.|++||+    |..|+.
T Consensus        94 -~C~n~~g---sy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           94 -FCHEEQN---SVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             -EEEEETT---EEEEECCTTEEECTTSSCEEE
T ss_pred             -EeECCCC---CeEEECCCCceeCCCCCcccc
Confidence             8988877   89999999999    777765

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.39  E-value=1.1e-07  Score=83.00  Aligned_cols=77  Identities=18%  Similarity=0.430  Sum_probs=55.2

Q ss_pred             cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCC-CCCCCCCCCCccccCC
Q psy10559         38 LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPEC-CSNHICRSSQLCVSAP  115 (418)
Q Consensus        38 ~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdC-c~~~~C~~~~~C~~~~  115 (418)
                      ++.| +++|.++|+| .+..++|.|.|++||+|..|+..+.               .|.  .| +..+.|..  .|++..
T Consensus        47 id~C~~~pC~n~g~C-~~~~g~y~C~C~~G~~G~~C~~~~~---------------~c~--~c~~~~~~C~~--~C~~~~  106 (142)
T 2c4f_L           47 GDQCASSPCQNGGSC-KDQLQSYICFCLPAFEGRNCETHKD---------------DQL--ICVNENGGCEQ--YCSDHT  106 (142)
T ss_dssp             CCGGGGCCCCTTCEE-EEETTEEEEECCTTEESTTSCEEGG---------------GCC--STTTGGGGCSS--EEECCT
T ss_pred             cCcCcCCCcCCCCEE-eCCCCCEEeeCCCCccCCccccCcc---------------ccc--cccCCCCCccC--EeECCC
Confidence            5678 8899999999 7778899999999999999986431               110  01 11222332  788765


Q ss_pred             CCCCceeecCCCCcc----ccccce
Q psy10559        116 KPIDILLRKQPPAIT----ASFFER  136 (418)
Q Consensus       116 ~~~~~~~C~C~~G~~----g~~Ce~  136 (418)
                      +  ..|.|.|++||+    |..|+.
T Consensus       107 g--~~y~C~C~~Gy~l~~dG~~C~~  129 (142)
T 2c4f_L          107 G--TKRSCRCHEGYSLLADGVSCTP  129 (142)
T ss_dssp             T--SCCEEECCTTEEECTTSSCEEE
T ss_pred             C--CCEEEECCCCceECCCCCCCCC
Confidence            4  368999999999    766664

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.38  E-value=1.8e-07  Score=83.65  Aligned_cols=105  Identities=25%  Similarity=0.518  Sum_probs=70.9

Q ss_pred             CCCCCcEEec------ceE-eeCCCCcCCCCCc-------C---------CC-CCCCCCC------cEEecCCCCCceEE
Q psy10559         13 WCNEHGQCKN------GTC-LCVTGWNGKHCTL-------E---------GC-PNSCSNH------GQCRVNSDSQWECK   62 (418)
Q Consensus        13 pC~n~G~C~~------g~C-~C~~G~~G~~Ce~-------~---------~C-~~~C~~~------G~C~~~~~g~~~C~   62 (418)
                      +|.++++|..      +.| .|.+||+|.+|+.       +         .| +..|.++      +.|+   ...+.|.
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~---~~tG~C~   78 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCN---RLTGECL   78 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBC---TTTCCBC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCccc---CCCCccc
Confidence            6899999963      489 7999999999983       1         24 4457666      4673   2356895


Q ss_pred             -cCCCCCCCCCCccccccCCCCccCCCCC---ccccCCCCCCCCCCCCCCC------ccccCCCCCCceeecCCCCcccc
Q psy10559         63 -CSDGWDGKDCSVLLEQNCNDGKDNDKDG---LVDCEDPECCSNHICRSSQ------LCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus        63 -C~~G~~G~~C~~~~~~~C~~g~c~~~~G---~~~C~dpdCc~~~~C~~~~------~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                       |.++|+|..|+.     |..|+-.+...   ...|      ....|.+.+      .|....+     +|.|.++|+|.
T Consensus        79 ~C~~g~~G~~Ce~-----C~~Gy~g~~~~~~~~~~C------~~C~C~~~Gs~~~~~~Cd~~tG-----~C~C~~g~~G~  142 (162)
T 1klo_A           79 KCIYNTAGFYCDR-----CKEGFFGNPLAPNPADKC------KACACNPYGTVQQQSSCNPVTG-----QCQCLPHVSGR  142 (162)
T ss_dssp             CBCTTEETTTTCE-----ECTTEEECTTCSSGGGSE------EECCCCTTTBGGGCCCCCTTTC-----CCCBCTTEEST
T ss_pred             CCCCCCcCCCcCc-----CchhhcCCccccCCCCCC------eeccCCCCCccCCCCCCCCCCC-----EeECCCCCcCC
Confidence             999999999984     66665443311   0112      222344433      5654443     79999999999


Q ss_pred             ccce
Q psy10559        133 FFER  136 (418)
Q Consensus       133 ~Ce~  136 (418)
                      +|++
T Consensus       143 ~Cd~  146 (162)
T 1klo_A          143 DCGT  146 (162)
T ss_dssp             TCCE
T ss_pred             CCCC
Confidence            9986

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.36  E-value=3.5e-07  Score=76.84  Aligned_cols=65  Identities=25%  Similarity=0.633  Sum_probs=49.1

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCC--CCCCCCCCccccCCCCCCc
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS--NHICRSSQLCVSAPKPIDI  120 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~--~~~C~~~~~C~~~~~~~~~  120 (418)
                      ..|.++|+| ++..++|.|.|++||+|..|+...+                   .+.|.  ...|..  +|++..+   .
T Consensus        20 ~~C~~~g~C-~~~~~~y~C~C~~G~~G~~C~~~~~-------------------~~~C~~~~~~C~~--~C~n~~g---~   74 (114)
T 1aut_L           20 SLCCGHGTC-IDGIGSFSCDCRSGWEGRFCQREVS-------------------FLNCSLDNGGCTH--YCLEEVG---W   74 (114)
T ss_dssp             STTTTSEEE-CCCSSCCCEEECTTEESTTSCEECC-------------------SSSSSSGGGGCSS--EEEECSS---S
T ss_pred             ccCCCcCCC-CCCCCCcEeeCCCCCcCCCcCcCCc-------------------CCcCcCCCCCCCC--EeECCCC---C
Confidence            349999999 7888999999999999999985431                   11121  223543  7988877   8


Q ss_pred             eeecCCCCcccc
Q psy10559        121 LLRKQPPAITAS  132 (418)
Q Consensus       121 ~~C~C~~G~~g~  132 (418)
                      |.|.|++||++.
T Consensus        75 y~C~C~~G~~~~   86 (114)
T 1aut_L           75 RRCSCAPGYKLG   86 (114)
T ss_dssp             EEEECCTTEEEC
T ss_pred             EEeECCCCeeEC
Confidence            999999999963

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.34  E-value=9.7e-08  Score=82.65  Aligned_cols=77  Identities=21%  Similarity=0.571  Sum_probs=23.7

Q ss_pred             CCcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccC
Q psy10559         36 CTLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSA  114 (418)
Q Consensus        36 Ce~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~  114 (418)
                      ..++.| +++|.++|+| .+..++|.|.|++||+|..|+..+...              |..    ....|.+  .|++.
T Consensus        40 ~d~d~C~~~pC~n~g~C-~~~~~~y~C~C~~G~~G~~C~~~i~d~--------------C~~----~~~~C~~--~C~~~   98 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKC-KDGLGEYTCTCLEGFEGKNCELFTRKL--------------CSL----DNGDCDQ--FCHEE   98 (134)
T ss_dssp             ------------------------------------------CCG--------------GGT----GGGGCSS--EEEEE
T ss_pred             CCcCcCCCCCCCCcCCc-ccCCCCEEeeCCCCccCCccccCCCCc--------------ccc----CCCCCCC--EeECC
Confidence            347789 8899999999 777889999999999999998533111              110    0134654  78887


Q ss_pred             CCCCCceeecCCCCcc----ccccce
Q psy10559        115 PKPIDILLRKQPPAIT----ASFFER  136 (418)
Q Consensus       115 ~~~~~~~~C~C~~G~~----g~~Ce~  136 (418)
                      .+   .|.|.|++||+    |..|+.
T Consensus        99 ~g---~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           99 QN---SVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             TT---EEEEECCTTEEECTTSSCEEE
T ss_pred             CC---CEEEECCCCcEECCCCCccCc
Confidence            76   89999999999    777764

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.31  E-value=7e-07  Score=95.61  Aligned_cols=68  Identities=25%  Similarity=0.709  Sum_probs=56.5

Q ss_pred             cccCCC-cC--CCCCc---EEec----ceEe-eCCCCcCCCCC----------------cCCC---CCCCCCCcEEecCC
Q psy10559          6 NIDVDL-LW--CNEHG---QCKN----GTCL-CVTGWNGKHCT----------------LEGC---PNSCSNHGQCRVNS   55 (418)
Q Consensus         6 ~id~C~-~p--C~n~G---~C~~----g~C~-C~~G~~G~~Ce----------------~~~C---~~~C~~~G~C~~~~   55 (418)
                      ++++|. .+  |.+++   +|.+    ++|. |++||.|..|+                +++|   +++|.++++| ++.
T Consensus        43 DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~C-vnt  121 (634)
T 1yo8_A           43 DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAEC-IYL  121 (634)
T ss_dssp             BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEE-EEC
T ss_pred             ccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccc-ccc
Confidence            378895 35  99999   9986    6999 99999998754                5789   2589999999 666


Q ss_pred             C----CCceEEcCCCCCC--CCCCc
Q psy10559         56 D----SQWECKCSDGWDG--KDCSV   74 (418)
Q Consensus        56 ~----g~~~C~C~~G~~G--~~C~~   74 (418)
                      .    ++|.|.|++||.|  ..|+.
T Consensus       122 ~~~~~GsY~C~C~~Gy~GdG~~Ce~  146 (634)
T 1yo8_A          122 GHFSDPMYKCECQTGYAGDGLICGE  146 (634)
T ss_dssp             CTTCSSSEEEEECTTEEESSSSEEE
T ss_pred             ccccccceeeeccCCccccCccccc
Confidence            6    8999999999987  78874

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.31  E-value=3.6e-07  Score=67.35  Aligned_cols=44  Identities=25%  Similarity=0.629  Sum_probs=33.9

Q ss_pred             CCCCC--cCCC-CCCCCCCcEEe----cCCCCCceEEcCCCCCCCCCCccc
Q psy10559         33 GKHCT--LEGC-PNSCSNHGQCR----VNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        33 G~~Ce--~~~C-~~~C~~~G~C~----~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      |+.|+  +++| .++|.|+|+|.    ++..+.|.|.|++||+|..|+..+
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v   51 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV   51 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence            56776  5789 88999999994    245678999999999999999765

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.28  E-value=5.5e-07  Score=88.00  Aligned_cols=68  Identities=21%  Similarity=0.582  Sum_probs=54.7

Q ss_pred             cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCC---CCCCCCCcccc
Q psy10559         38 LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSN---HICRSSQLCVS  113 (418)
Q Consensus        38 ~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~---~~C~~~~~C~~  113 (418)
                      +++| .++|.++|+| .+..++|.|.|++||.|..|+..+                     +.|..   .+|.+  .|.+
T Consensus         5 ~~~C~~~pC~~~g~C-~~~~~~~~C~C~~g~~g~~C~~~~---------------------~eC~~~~~~~C~~--~C~~   60 (317)
T 3h5c_B            5 GSPCISQPCLHNGSC-QDSIWGYTCTCSPGYEGSNCELAK---------------------NECHPERTDGCQH--FCLP   60 (317)
T ss_dssp             -CCTTSCCCTTTCCC-CCCSSSCCCCCSSSCCSSSSCCCS---------------------SSCCTTCTTSCSS--EEEC
T ss_pred             CCcCCCCCCCCCCEe-ECCCCCeEEECCCCCcCCccccCc---------------------ccCCCCCCCCCcC--cccc
Confidence            4678 8899999999 777889999999999999998544                     22332   57876  8998


Q ss_pred             CCCCCCceeecCCCCcccc
Q psy10559        114 APKPIDILLRKQPPAITAS  132 (418)
Q Consensus       114 ~~~~~~~~~C~C~~G~~g~  132 (418)
                      ..+   .|.|.|++||.+.
T Consensus        61 ~~g---~~~C~C~~g~~~~   76 (317)
T 3h5c_B           61 GQE---SYTCSCAQGYRLG   76 (317)
T ss_dssp             CSS---SCEEECCTTEECC
T ss_pred             CCC---eeEEecccccccc
Confidence            877   8999999999874

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.26  E-value=2.5e-07  Score=77.23  Aligned_cols=79  Identities=23%  Similarity=0.417  Sum_probs=34.3

Q ss_pred             eCCCCcCCCCCcCCC-C--CCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCC-C
Q psy10559         27 CVTGWNGKHCTLEGC-P--NSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS-N  102 (418)
Q Consensus        27 C~~G~~G~~Ce~~~C-~--~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~-~  102 (418)
                      ...||.|..|++++| .  ..|.  ..| .+..++|.|.|++||.|..                   ...|++.++|. .
T Consensus        18 ~~~~~~~~~Cd~neC~~~~~~C~--~~C-~n~~g~y~C~C~~Gy~g~~-------------------g~~C~dideC~~~   75 (107)
T 2w2n_E           18 TENLYFQGAMGTNECLDNNGGCS--YVC-NDLKIGYECLCPDGFQLVA-------------------QRRCEDIDECQDP   75 (107)
T ss_dssp             --CCCCSCCBSCCGGGTGGGGCS--SEE-ECCSBSCEEECCTTCEEET-------------------TTEEEC-------
T ss_pred             cCCCcCCCCCcCccCcCCCCCCC--CEe-EeCCCCeEEECCCCccccC-------------------CCccccccccCCC
Confidence            457899999998888 3  3564  589 7788999999999999820                   01233444444 3


Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcccc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                      .+|.  +.|++..+   +|.|.|++||.+.
T Consensus        76 ~~C~--~~C~n~~g---sy~C~C~~Gy~~~  100 (107)
T 2w2n_E           76 DTCS--QLCVNLEG---GYKCQCEEGFQLD  100 (107)
T ss_dssp             ------------------------------
T ss_pred             CCcC--CeeecCCC---CEEEECCCCceEC
Confidence            5675  68998877   8999999999873

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.21  E-value=6.4e-07  Score=83.98  Aligned_cols=59  Identities=32%  Similarity=0.866  Sum_probs=50.4

Q ss_pred             cCCCCCcEEecceEeeCCC------CcCCCCC--cCCCCC----CCCCC--cEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         12 LWCNEHGQCKNGTCLCVTG------WNGKHCT--LEGCPN----SCSNH--GQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        12 ~pC~n~G~C~~g~C~C~~G------~~G~~Ce--~~~C~~----~C~~~--G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .+|+++|+|.+++|.|.+|      |+|..|+  ...|+.    +|.++  |+|. .    ..|.|.+||+|..|+..
T Consensus       143 ~~Csg~G~C~~g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~-~----g~C~C~~G~~G~~C~~~  215 (217)
T 2p28_B          143 IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF-C----GKCRCHPGFEGSACQHH  215 (217)
T ss_dssp             CBGGGTEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEE-T----TEEEECTTEESTTSCEE
T ss_pred             CCCCCCCEEeCCceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEe-C----CeeECCCCCccCCcCCC
Confidence            4799999999999999999      5999998  567843    59988  9994 3    38999999999999853

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.20  E-value=2.6e-07  Score=73.73  Aligned_cols=72  Identities=29%  Similarity=0.721  Sum_probs=50.4

Q ss_pred             cCCC-CC--CCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCC--CCCCCccc
Q psy10559         38 LEGC-PN--SCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHI--CRSSQLCV  112 (418)
Q Consensus        38 ~~~C-~~--~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~--C~~~~~C~  112 (418)
                      +++| .+  +|. +|+| ++..++|.|.|++||++..-.                 ...|.+.+.|...+  |. ++.|+
T Consensus         3 ideC~~~~~~C~-~g~C-~n~~g~y~C~C~~Gy~~~~~~-----------------g~~C~dideC~~~~~~C~-~~~C~   62 (86)
T 1lmj_A            3 IDECRISPDLCG-RGQC-VNTPGDFECKCDEGYESGFMM-----------------MKNCMDIDECQRDPLLCR-GGVCH   62 (86)
T ss_dssp             CCTTTTCSSTTT-TSCE-EEETTEEEECCCSSEEECTTT-----------------SSSEEECCHHHHCSSTTT-TSEEE
T ss_pred             cccccCCCCCCC-CCEE-ECCCCCEEeeCCCCcCccCCC-----------------CCccCCcccccCCCCcCC-CCEeE
Confidence            5678 33  496 4699 778899999999999842110                 11233445554444  65 57999


Q ss_pred             cCCCCCCceeecCCCCcccc
Q psy10559        113 SAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       113 ~~~~~~~~~~C~C~~G~~g~  132 (418)
                      +..+   +|.|.|++||++.
T Consensus        63 n~~g---~y~C~C~~G~~~~   79 (86)
T 1lmj_A           63 NTEG---SYRCECPPGHQLS   79 (86)
T ss_dssp             EETT---EEEEESCTTSCCC
T ss_pred             cCCC---CEEEECcCCcccC
Confidence            9887   8999999999873

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.10  E-value=6.1e-07  Score=71.72  Aligned_cols=67  Identities=30%  Similarity=0.700  Sum_probs=50.1

Q ss_pred             cCCC-CCC--CCCCcEEecCCCCCceEEcCCCCC----CCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCc
Q psy10559         38 LEGC-PNS--CSNHGQCRVNSDSQWECKCSDGWD----GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQL  110 (418)
Q Consensus        38 ~~~C-~~~--C~~~G~C~~~~~g~~~C~C~~G~~----G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~  110 (418)
                      +++| .++  | ++++| .+..++|.|.|++||+    |..|                      ++.+.|...+|.  +.
T Consensus         3 ideC~~~~~~C-~~~~C-~n~~g~y~C~C~~G~~~~~~g~~C----------------------~dideC~~~~C~--~~   56 (87)
T 1z6c_A            3 VDECSLKPSIC-GTAVC-KNIPGDFECECPEGYRYNLKSKSC----------------------EDIDECSENMCA--QL   56 (87)
T ss_dssp             SCSSSSSSSSB-TTSSC-CCBTTBCCCSSSTTCEEETTTTEE----------------------ECCCHHHHSCCS--SE
T ss_pred             cccccCCCCCC-CCCEe-ECCCCCEEEECCCCceECCCCCcC----------------------CCcCeeCCCCCC--CE
Confidence            4677 444  8 78999 7888999999999998    4444                      344555566786  68


Q ss_pred             cccCCCCCCceeecCCCCcccccc
Q psy10559        111 CVSAPKPIDILLRKQPPAITASFF  134 (418)
Q Consensus       111 C~~~~~~~~~~~C~C~~G~~g~~C  134 (418)
                      |++.++   +|.|.|+ |+.|..+
T Consensus        57 C~n~~g---~y~C~C~-g~~G~~~   76 (87)
T 1z6c_A           57 CVNYPG---GYTCYCD-GKKGFKL   76 (87)
T ss_dssp             ECCCSS---SCCEECC-SSSCCBC
T ss_pred             EEccCC---CEEEECC-CCcCCcc
Confidence            999887   8999997 6666443

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.06  E-value=8.8e-07  Score=74.85  Aligned_cols=66  Identities=29%  Similarity=0.726  Sum_probs=52.3

Q ss_pred             CCccc----ccCCCcCCCCC---cEEec---ceEeeCCCCc---CCCCC-cCCC-C-CCCCCCcEEecCCCCCceEEcCC
Q psy10559          2 RGFSN----IDVDLLWCNEH---GQCKN---GTCLCVTGWN---GKHCT-LEGC-P-NSCSNHGQCRVNSDSQWECKCSD   65 (418)
Q Consensus         2 ~Gf~~----id~C~~pC~n~---G~C~~---g~C~C~~G~~---G~~Ce-~~~C-~-~~C~~~G~C~~~~~g~~~C~C~~   65 (418)
                      .||.+    +++|..+|.++   ++|.+   ++|.|++||.   |..|+ +++| . ++|  +++| ++..++|.|.|++
T Consensus        30 ~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C-~n~~g~y~C~C~~  106 (118)
T 1dx5_I           30 EGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENGGFC--SGVC-HNLPGTFECICGP  106 (118)
T ss_dssp             TTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEE-EECSSSEEEEECS
T ss_pred             CCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccccccccCCCCCC--cCeE-EeCCCCEEEECCC
Confidence            46654    45676556554   67765   7999999999   88996 7789 4 889  7899 7889999999999


Q ss_pred             CCCCC
Q psy10559         66 GWDGK   70 (418)
Q Consensus        66 G~~G~   70 (418)
                      ||+|.
T Consensus       107 G~~g~  111 (118)
T 1dx5_I          107 DSALA  111 (118)
T ss_dssp             SSSCE
T ss_pred             CCccC
Confidence            99874

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.95  E-value=5.5e-06  Score=56.06  Aligned_cols=34  Identities=38%  Similarity=1.037  Sum_probs=21.5

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      ++| .++|.++|+| .+..++|.|.|++||+|..|+
T Consensus         4 d~C~~~pC~ngg~C-~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            4 DQCESNPCLNGGSC-KDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CTTTTCCCCTTCEE-EEETTEEEEECCTTCCSTTSC
T ss_pred             ccCCCCCCCCCCEe-EcCCCceEeECCCCCcCCccC
Confidence            455 5666666666 444566667777777666665

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.88  E-value=3.7e-06  Score=70.04  Aligned_cols=61  Identities=30%  Similarity=0.836  Sum_probs=21.6

Q ss_pred             cccCCCc---CCCCCcEEec----ceEeeCCCCcC---CCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559          6 NIDVDLL---WCNEHGQCKN----GTCLCVTGWNG---KHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus         6 ~id~C~~---pC~n~G~C~~----g~C~C~~G~~G---~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      ++++|..   .|.  .+|.+    +.|.|++||.|   ..|+ +++|  +++|.  +.| .+..++|.|.|++||.|..
T Consensus        28 d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C-~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           28 GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLC-VNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC------------------------------------
T ss_pred             cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--Cee-ecCCCCEEEECCCCceECC
Confidence            3555532   343  48976    79999999998   7897 7889  47886  789 7889999999999998743

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.86  E-value=5.4e-06  Score=86.97  Aligned_cols=99  Identities=15%  Similarity=0.243  Sum_probs=30.2

Q ss_pred             eeCCCCcCCCCC-cCCC-CCCCCCCcEEecCC---CCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCC
Q psy10559         26 LCVTGWNGKHCT-LEGC-PNSCSNHGQCRVNS---DSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECC  100 (418)
Q Consensus        26 ~C~~G~~G~~Ce-~~~C-~~~C~~~G~C~~~~---~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc  100 (418)
                      +|.+||.|..|+ ...| +.+|.++|.|....   ...+.|.|.+||.|..|+     .|..|......      +.+.|
T Consensus       422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-----~C~~G~~g~~~------~~~~C  490 (525)
T 4aqs_A          422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSN------DLDGC  490 (525)
T ss_dssp             EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-----C---------------------
T ss_pred             CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-----cCCCCccCCCC------CCCCC
Confidence            344444444443 2346 56677766662111   245689999999999997     36555443222      22333


Q ss_pred             CCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        101 SNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       101 ~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      ...+|.+++.|...-... ..+|.|++||+|..|++
T Consensus       491 ~~C~C~~~gs~~~~C~~~-tG~C~C~~G~~G~~Ceq  525 (525)
T 4aqs_A          491 RPCDCDLGGALNNSCSED-SGQCSCLPHMIGRQCNE  525 (525)
T ss_dssp             ------------------------------------
T ss_pred             cCCCCCCCCccCCccCCC-CCeeECCCCCcCCCCCC
Confidence            445676666554332111 23699999999999874

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.80  E-value=1.8e-05  Score=53.51  Aligned_cols=33  Identities=36%  Similarity=0.710  Sum_probs=28.9

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~   38 (418)
                      ++++|. +||.|+|+|.+    ++|.|++||+|.+|++
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~   39 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence            578895 59999999986    6999999999999973

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.75  E-value=1.3e-05  Score=58.88  Aligned_cols=40  Identities=15%  Similarity=0.159  Sum_probs=31.9

Q ss_pred             CCCCCCCCCCCCccccCC--CCCCceeecCCCCcccccccee
Q psy10559         98 ECCSNHICRSSQLCVSAP--KPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        98 dCc~~~~C~~~~~C~~~~--~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +.|.+++|.|+++|...+  +....|.|.|++||+|.+||+.
T Consensus         9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~   50 (55)
T 3u7u_G            9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY   50 (55)
T ss_dssp             CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred             CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence            567888999999996532  2345899999999999999973

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.75  E-value=1.3e-05  Score=80.85  Aligned_cols=60  Identities=28%  Similarity=0.810  Sum_probs=49.9

Q ss_pred             cCCC-cCCCCCcEEec----ceEeeCCCCc---CCCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559          8 DVDL-LWCNEHGQCKN----GTCLCVTGWN---GKHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~----g~C~C~~G~~---G~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      +||. ++|...+.|.+    +.|.|++||.   |..|+ +++|  +.+|.+  .| .+..|+|.|.|.+||.+.
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C-~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LC-VNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CC-BCCSSSCBCCCCTTCCCC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--cc-CCCccceeeecccccccc
Confidence            5785 36666789986    6999999998   88997 7899  577874  89 788999999999999874

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.68  E-value=2.9e-05  Score=54.36  Aligned_cols=33  Identities=27%  Similarity=0.580  Sum_probs=26.8

Q ss_pred             CCCCCcEEec-CCCCCceEEcCCCCCCCCCCccc
Q psy10559         44 SCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        44 ~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +|.++|+|.. +..++|.|.|++||+|..|+..+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   43 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD   43 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence            8999999941 56778899999999999998654

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.67  E-value=8e-06  Score=81.87  Aligned_cols=65  Identities=26%  Similarity=0.710  Sum_probs=17.6

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCc----CCCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCC----C
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWN----GKHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWD----G   69 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~----G~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~----G   69 (418)
                      ++++|. ++|.....|.+    +.|.|++||.    |..|+ +++|  ..+|.+.  | .+..++|.|.|.+||.    |
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~--C-~~~~g~~~C~C~~g~~l~~d~   78 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--C-TNSEGAFQCWCEAGYELRPDR   78 (386)
T ss_dssp             --------------------------------------------------CCTTE--E-C-----CCEECCTTEEECTTS
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc--C-CCCCCCCeEEECCCceEcCCC
Confidence            578995 35433458965    6899999998    99997 6889  5789853  9 7889999999999997    5


Q ss_pred             CCCC
Q psy10559         70 KDCS   73 (418)
Q Consensus        70 ~~C~   73 (418)
                      ..|.
T Consensus        79 ~~C~   82 (386)
T 3v65_B           79 RSCK   82 (386)
T ss_dssp             SCEE
T ss_pred             CeEC
Confidence            5554

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.66  E-value=4e-05  Score=55.55  Aligned_cols=39  Identities=31%  Similarity=0.752  Sum_probs=30.4

Q ss_pred             cCCC-CC---CCCCCcEEec-CCCCCceEEcCCCCCCCCCCccc
Q psy10559         38 LEGC-PN---SCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        38 ~~~C-~~---~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +++| ++   +|.++|+|.. +..++|.|.|++||+|..|+..+
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   46 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD   46 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence            3567 44   8999999931 66788999999999999998655

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.63  E-value=3.6e-06  Score=61.00  Aligned_cols=43  Identities=23%  Similarity=0.598  Sum_probs=33.2

Q ss_pred             eEeeCCCCcCCCCCcCCCCCCCCCCcEEec---CCCCCceEEcCCCCCCCCCCcc
Q psy10559         24 TCLCVTGWNGKHCTLEGCPNSCSNHGQCRV---NSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        24 ~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~---~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      +|.|++||+         .++|.|+|+|..   +..+.|.|.|++||+|..|+..
T Consensus         4 ~C~C~~g~~---------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~   49 (52)
T 3ca7_A            4 TYKCPETFD---------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK   49 (52)
T ss_dssp             CBCCCHHHH---------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred             eeECCCCCc---------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence            577888876         467899999942   1345789999999999999854

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.52  E-value=2.6e-05  Score=81.72  Aligned_cols=60  Identities=32%  Similarity=0.743  Sum_probs=19.9

Q ss_pred             CCCCCcEEe--------cceEeeCCCCcCCCCCc------------CCC-CCCCCCCcEEecCC--CCCceEEcCCCCCC
Q psy10559         13 WCNEHGQCK--------NGTCLCVTGWNGKHCTL------------EGC-PNSCSNHGQCRVNS--DSQWECKCSDGWDG   69 (418)
Q Consensus        13 pC~n~G~C~--------~g~C~C~~G~~G~~Ce~------------~~C-~~~C~~~G~C~~~~--~g~~~C~C~~G~~G   69 (418)
                      +|.++|+|.        +|+|.|.+||+|.+|+.            +.| +.+|.++|.| .+.  ...++|.|.+||+|
T Consensus       442 ~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~-~~~C~~~tG~C~C~~G~~G  520 (525)
T 4aqs_A          442 ACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGAL-NNSCSEDSGQCSCLPHMIG  520 (525)
T ss_dssp             CCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------------
T ss_pred             CCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCcc-CCccCCCCCeeECCCCCcC
Confidence            666666553        27899999999999962            457 6778887766 221  34568999999999


Q ss_pred             CCCC
Q psy10559         70 KDCS   73 (418)
Q Consensus        70 ~~C~   73 (418)
                      ..|+
T Consensus       521 ~~Ce  524 (525)
T 4aqs_A          521 RQCN  524 (525)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            9997

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.47  E-value=4.9e-05  Score=77.62  Aligned_cols=92  Identities=20%  Similarity=0.282  Sum_probs=30.8

Q ss_pred             CCCCC-cEEec----ceEeeCCCCcCCCCCc--CCC-CCCCCCCcEEecCCCCCceEE-cCCCCCCCCCCccccccCCCC
Q psy10559         13 WCNEH-GQCKN----GTCLCVTGWNGKHCTL--EGC-PNSCSNHGQCRVNSDSQWECK-CSDGWDGKDCSVLLEQNCNDG   83 (418)
Q Consensus        13 pC~n~-G~C~~----g~C~C~~G~~G~~Ce~--~~C-~~~C~~~G~C~~~~~g~~~C~-C~~G~~G~~C~~~~~~~C~~g   83 (418)
                      .|++| ..|..    +.|.|..+|.|.+|+.  +.. ..++..++.|.......+.|. |.-++.|..|+..        
T Consensus       298 ~CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~--------  369 (426)
T 3zyj_B          298 KCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNE--------  369 (426)
T ss_dssp             CCSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------
T ss_pred             cCCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccC--------
Confidence            57777 47863    5899999999999983  222 345554433312223334553 4444455555422        


Q ss_pred             ccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         84 KDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        84 ~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                                        ..+|.++++|....      .|.|++||+|..|++
T Consensus       370 ------------------t~~C~ngg~C~~~~------~C~C~~G~~G~~Ce~  398 (426)
T 3zyj_B          370 ------------------LLHCQNGGTCHNNV------RCLCPAAYTGILCEK  398 (426)
T ss_dssp             -----------------------------------------------------
T ss_pred             ------------------cccCCCCCCcCCCC------CCcCCCCCcCCCCcC
Confidence                              23688888897643      699999999988876

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.45  E-value=8.5e-05  Score=53.80  Aligned_cols=33  Identities=30%  Similarity=0.683  Sum_probs=28.6

Q ss_pred             cccCCCc----CCCCCcEEe--c----ceEeeCCCCcCCCCCc
Q psy10559          6 NIDVDLL----WCNEHGQCK--N----GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         6 ~id~C~~----pC~n~G~C~--~----g~C~C~~G~~G~~Ce~   38 (418)
                      ++++|.+    ||.|+|+|.  +    ++|.|++||+|.+|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            4788964    899999998  4    6999999999999984

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.45  E-value=8.1e-05  Score=52.53  Aligned_cols=31  Identities=35%  Similarity=0.726  Sum_probs=16.7

Q ss_pred             CCCCCCcEEecC-CCCCceEEcCCCCCCCCCCc
Q psy10559         43 NSCSNHGQCRVN-SDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        43 ~~C~~~G~C~~~-~~g~~~C~C~~G~~G~~C~~   74 (418)
                      ++|.+ |+|... ..++|.|.|++||+|.+|+.
T Consensus        12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            45665 566211 12455666666666666654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.44  E-value=7.8e-05  Score=75.13  Aligned_cols=65  Identities=23%  Similarity=0.535  Sum_probs=48.3

Q ss_pred             CC-CCCCCCCcEEecCCCCCceEEcCCCCC---CCCCCccccccCCCCccCCCCCccccCCCCCCC-CCCCCCCCccccC
Q psy10559         40 GC-PNSCSNHGQCRVNSDSQWECKCSDGWD---GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS-NHICRSSQLCVSA  114 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~---G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C~~~  114 (418)
                      +| .++|..++.| .+..++|.|.|++||.   |..|+                      +.++|. ..+|.+  .|.+.
T Consensus         2 eC~~~~~~c~~~C-~~~~~~y~C~C~~G~~~~~~~~C~----------------------dideC~~~~~C~~--~C~n~   56 (400)
T 3p5b_L            2 ECLDNNGGCSHVC-NDLKIGYECLCPDGFQLVAQRRCE----------------------DIDECQDPDTCSQ--LCVNL   56 (400)
T ss_dssp             CTTTTGGGCSSEE-EECSSSEEEECCTTEEECSSSCEE----------------------ECCCCSTTSSCSS--CCBCC
T ss_pred             cccCCCCCCCCEe-ECCCCCeEEECCCCCCcCCCCccc----------------------CchhhhccCCCCC--ccCCC
Confidence            56 4555556799 7788999999999998   55553                      334443 456754  79988


Q ss_pred             CCCCCceeecCCCCcccc
Q psy10559        115 PKPIDILLRKQPPAITAS  132 (418)
Q Consensus       115 ~~~~~~~~C~C~~G~~g~  132 (418)
                      .+   +|.|.|.+||.+.
T Consensus        57 ~g---~~~C~C~~g~~~~   71 (400)
T 3p5b_L           57 EG---GYKCQCEEGFQLD   71 (400)
T ss_dssp             SS---SCBCCCCTTCCCC
T ss_pred             cc---ceeeecccccccc
Confidence            77   8999999999764

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.36  E-value=8.2e-05  Score=52.49  Aligned_cols=33  Identities=30%  Similarity=0.642  Sum_probs=27.6

Q ss_pred             cccCCC----cCCCCCcEEec------ceEeeCCCCcCCCCCcC
Q psy10559          6 NIDVDL----LWCNEHGQCKN------GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus         6 ~id~C~----~pC~n~G~C~~------g~C~C~~G~~G~~Ce~~   39 (418)
                      ++++|+    +||.| |+|.+      ++|.|++||+|.+|+..
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~   44 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence            467885    59999 99973      68999999999999853

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.36  E-value=3.6e-05  Score=77.12  Aligned_cols=71  Identities=18%  Similarity=0.444  Sum_probs=18.3

Q ss_pred             cCCC-CCCCCCCcEEecCCCCCceEEcCCCCC----CCCCCccccccCCCCccCCCCCccccCCCCCCC-CCCCCCCCcc
Q psy10559         38 LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWD----GKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCS-NHICRSSQLC  111 (418)
Q Consensus        38 ~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~----G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C  111 (418)
                      +++| .++|.....| .+..++|.|.|++||.    |..|+                      +.++|. ..+|.+.  |
T Consensus         3 ~~~C~~~~~~c~~~C-~~~~g~~~C~C~~G~~l~~~~~~C~----------------------d~~eC~~~~~C~~~--C   57 (386)
T 3v65_B            3 EENCNVNNGGCAQKC-QMIRGAVQCTCHTGYRLTEDGRTCQ----------------------DVNECAEEGYCSQG--C   57 (386)
T ss_dssp             ------------------------------------------------------------------------CCTTE--E
T ss_pred             cCcccCCCCCCCCCC-cCCCCCcEeECCCCceECCCCCccC----------------------ccceeCCcCcccCc--C
Confidence            4567 4443333589 7778889999999998    65553                      334443 4578653  9


Q ss_pred             ccCCCCCCceeecCCCCcc----ccccce
Q psy10559        112 VSAPKPIDILLRKQPPAIT----ASFFER  136 (418)
Q Consensus       112 ~~~~~~~~~~~C~C~~G~~----g~~Ce~  136 (418)
                      .+..+   +|.|.|++||.    +..|..
T Consensus        58 ~~~~g---~~~C~C~~g~~l~~d~~~C~~   83 (386)
T 3v65_B           58 TNSEG---AFQCWCEAGYELRPDRRSCKA   83 (386)
T ss_dssp             C--------CCEECCTTEEECTTSSCEEE
T ss_pred             CCCCC---CCeEEECCCceEcCCCCeECC
Confidence            98887   89999999998    666754

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.35  E-value=4.4e-05  Score=57.25  Aligned_cols=37  Identities=30%  Similarity=0.742  Sum_probs=30.1

Q ss_pred             CC-CCCCCCCcEEec----CCCCCceEEcCCCCCCCCCCccc
Q psy10559         40 GC-PNSCSNHGQCRV----NSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~----~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .| .++|.++|+|..    +..++|.|.|++||+|..|+..+
T Consensus         8 ~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i   49 (63)
T 1hae_A            8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV   49 (63)
T ss_dssp             HHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred             CCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence            46 788999999942    24678999999999999998766

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.27  E-value=0.00027  Score=76.54  Aligned_cols=91  Identities=25%  Similarity=0.525  Sum_probs=60.7

Q ss_pred             CCCCCcEEec------ceEeeCCCCcCC--CCCcCCC-C--CCCCCCcEEecCCCCCceEEcCCCCCCCCCCccccccCC
Q psy10559         13 WCNEHGQCKN------GTCLCVTGWNGK--HCTLEGC-P--NSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLLEQNCN   81 (418)
Q Consensus        13 pC~n~G~C~~------g~C~C~~G~~G~--~Ce~~~C-~--~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~   81 (418)
                      .|.+ |.|++      +.+.|..|+.+.  .|.+++| .  ..|.  ..| .+..++|.|.|++||.+..          
T Consensus       262 ~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~--~~C-~~~~~~~~C~C~~G~~~~~----------  327 (699)
T 1n7d_A          262 KCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS--HVC-NDLKIGYECLCPDGFQLVA----------  327 (699)
T ss_dssp             CCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC--TTC-CCCTTCCCCCCCSSSCCCS----------
T ss_pred             ecCC-CcEeCCcccccccceecCcccccccccccccccccccCcC--CCc-ccCCCCcEEeCCCCeEcCC----------
Confidence            4543 66753      466777777654  4556677 2  2354  468 6778999999999998410          


Q ss_pred             CCccCCCCCccccCCCCCCC-CCCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559         82 DGKDNDKDGLVDCEDPECCS-NHICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        82 ~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                               ...|.+.++|. ..+|.  ..|++..+   +|.|.|++||.+
T Consensus       328 ---------~~~C~dideC~~~~~C~--~~C~n~~g---~y~C~C~~G~~~  364 (699)
T 1n7d_A          328 ---------QRRCEDIDECQDPDTCS--QLCVNLEG---GYKCQCEEGFQL  364 (699)
T ss_dssp             ---------SSCCCCCCCCSSSSSCT--TTCCBCSS---CBCCCCCSSCBC
T ss_pred             ---------CCcccCccccCCCCccc--cccccCCC---Ceeeeeeccccc
Confidence                     01233444443 45674  47999887   899999999986

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.25  E-value=4.1e-05  Score=57.43  Aligned_cols=37  Identities=27%  Similarity=0.751  Sum_probs=30.3

Q ss_pred             cCCC-CCCCCCC--cEEecCCCCCceEEcCCCCC-CCCCCcc
Q psy10559         38 LEGC-PNSCSNH--GQCRVNSDSQWECKCSDGWD-GKDCSVL   75 (418)
Q Consensus        38 ~~~C-~~~C~~~--G~C~~~~~g~~~C~C~~G~~-G~~C~~~   75 (418)
                      +++| +++|.++  |+| .+..++|.|.|++||+ |..|+..
T Consensus        11 ~d~C~snPC~nga~gtC-~~~~g~y~C~C~~Gy~~G~~C~~~   51 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTC-KETNSGYICRCNQGYRISLDGTGN   51 (61)
T ss_dssp             CCHHHHCSSCSSSCCEE-EECSSEEEEECCTTEEEEECSSSC
T ss_pred             CCcCcCCCCcCCCcccc-ccCCCceEeECCCCCccCCCCCCC
Confidence            4568 7889988  899 6778889999999999 9888743

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.22  E-value=0.00025  Score=78.10  Aligned_cols=88  Identities=26%  Similarity=0.577  Sum_probs=58.4

Q ss_pred             CCCCCcEEec------ceEeeCCCCcCCC--CCcCCC-CC--CCCCCcEEecCCCCCceEEcCCCCC---CCCCCccccc
Q psy10559         13 WCNEHGQCKN------GTCLCVTGWNGKH--CTLEGC-PN--SCSNHGQCRVNSDSQWECKCSDGWD---GKDCSVLLEQ   78 (418)
Q Consensus        13 pC~n~G~C~~------g~C~C~~G~~G~~--Ce~~~C-~~--~C~~~G~C~~~~~g~~~C~C~~G~~---G~~C~~~~~~   78 (418)
                      +|.+ |.|++      +.+.|..|+.+..  |..++| .+  .|.  ..| .+..++|.|.|++||.   |..|+     
T Consensus       280 ~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~--~~C-~~~~~~y~C~C~~Gy~l~~g~~C~-----  350 (791)
T 3m0c_C          280 KCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS--HVC-NDLKIGYECLCPDGFQLVAQRRCE-----  350 (791)
T ss_dssp             CCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCS--SEE-EECSBSEEEECCTTCEEETTTEEE-----
T ss_pred             ccCC-CcccccccccCCccccccccCccccccccccccccccCcc--ccc-cCCCCCcccCCCCCCccCCCCccc-----
Confidence            4644 67764      4567777776543  555555 11  232  389 6778999999999996   54443     


Q ss_pred             cCCCCccCCCCCccccCCCCCCC-CCCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559         79 NCNDGKDNDKDGLVDCEDPECCS-NHICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        79 ~C~~g~c~~~~G~~~C~dpdCc~-~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                                       +.++|. ...|.  ..|++..+   +|.|.|++||..
T Consensus       351 -----------------dideC~~~~~C~--~~C~n~~g---sy~C~C~~Gy~l  382 (791)
T 3m0c_C          351 -----------------DIDECQDPDTCS--QLCVNLEG---GYKCQCEEGFQL  382 (791)
T ss_dssp             -----------------CCCCCSSSSSCT--TTCCBCSS---CBCCCCCSSEEC
T ss_pred             -----------------cCcccCCCCCCC--CeeecCCC---CceeecCCCCEe
Confidence                             344443 34463  58999887   899999999965

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.10  E-value=0.00017  Score=52.38  Aligned_cols=35  Identities=23%  Similarity=0.623  Sum_probs=27.8

Q ss_pred             CCCCCCCcEEec-CCCCCceEEcCCCCCCCCCCccc
Q psy10559         42 PNSCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        42 ~~~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .++|.++|+|.. +..++|.|.|++||+|..|+..+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~   46 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD   46 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence            578998899941 55677899999999999998654

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.06  E-value=8.3e-05  Score=64.64  Aligned_cols=47  Identities=32%  Similarity=0.931  Sum_probs=39.5

Q ss_pred             ceEeeCCCCc---CCCCC-cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559         23 GTCLCVTGWN---GKHCT-LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus        23 g~C~C~~G~~---G~~Ce-~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      +.|.|++||.   |..|+ +++|   +.+|.+ |+| ++..++|+|.|++||+|..
T Consensus        88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C-~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLC-VNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEE-EEETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCCccCccccccCCCCCCCC-CEE-ECCCCCEEeeCCCCCccCC
Confidence            5678999994   99997 7889   456984 699 7889999999999999854

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.03  E-value=0.00023  Score=53.21  Aligned_cols=35  Identities=26%  Similarity=0.577  Sum_probs=28.0

Q ss_pred             ccCCC-cCCCCCcEEec---------ceEeeCCCCcCCCCC--cCCC
Q psy10559          7 IDVDL-LWCNEHGQCKN---------GTCLCVTGWNGKHCT--LEGC   41 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~---------g~C~C~~G~~G~~Ce--~~~C   41 (418)
                      .++|. +||.|+|+|.+         ++|.|++||+|.+|+  ++.|
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~   52 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK   52 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSS
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcc
Confidence            35664 59999999973         589999999999998  4444

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.00  E-value=0.00039  Score=59.07  Aligned_cols=55  Identities=24%  Similarity=0.547  Sum_probs=39.3

Q ss_pred             CCCCCcEEec------c-eEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         13 WCNEHGQCKN------G-TCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        13 pC~n~G~C~~------g-~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      ||.|+|+|.+      + +|.|++||+|.+|+++.. ..|.      .+....|++.+..+++|..|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-~~C~------~g~G~~YrG~~~~t~sG~~Cq~   63 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCY------EGNGHFYRGKASTDTMGRPCLP   63 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-CCSB------CSSCTTCCSCCCBBTTSCBBCC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-CCCc------ccccccceeeccccccCCcccC
Confidence            7889999965      2 799999999999986532 2333      1223467888888888888863

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=96.92  E-value=0.00048  Score=66.75  Aligned_cols=52  Identities=33%  Similarity=0.799  Sum_probs=42.3

Q ss_pred             CCCCCcEEecceEeeCCCCcCCCCCc--C---------CCC-C----CCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         13 WCNEHGQCKNGTCLCVTGWNGKHCTL--E---------GCP-N----SCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~G~~Ce~--~---------~C~-~----~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +|.++|+|.-|.|.|.+||.|.+|+.  +         .|. .    .|+++|.|..+     .|.|..+|.|
T Consensus       197 ~C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG-----~C~C~~~~~~  264 (280)
T 2p26_A          197 LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCLCHTSDVP  264 (280)
T ss_dssp             GGGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT-----EEEECCCSST
T ss_pred             ccCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC-----eeECcCCCCC
Confidence            48889999999999999999999972  1         683 2    49999999533     8999888743

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.90  E-value=9.9e-05  Score=65.20  Aligned_cols=34  Identities=29%  Similarity=0.968  Sum_probs=28.8

Q ss_pred             cCCC--CCCCCCCcEEecCCCCCceEEcCCCCC----CCCCC
Q psy10559         38 LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWD----GKDCS   73 (418)
Q Consensus        38 ~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~----G~~C~   73 (418)
                      +++|  +++|. +|+| ++..++|+|.|++||+    |..|+
T Consensus         3 ideC~~~~~C~-~~~C-~n~~gsy~C~C~~Gy~~~~~g~~C~   42 (162)
T 1uzk_A            3 VNECLDPTTCI-SGNC-VNTPGSYICDCPPDFELNPTRVGCV   42 (162)
T ss_dssp             CCGGGSTTSSB-TSEE-EEETTEEEEECCTTCEECTTSSBEE
T ss_pred             cccCCCCCCCC-CCEe-ECCCCCEEEeCCCCCeECCCCCccc
Confidence            5677  47897 6999 7889999999999998    77776

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=96.84  E-value=0.00071  Score=61.54  Aligned_cols=40  Identities=35%  Similarity=0.853  Sum_probs=33.0

Q ss_pred             CCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559         33 GKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        33 G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      .+.|....|...|.|+|.| .   +...|.|++||+|..|+...
T Consensus       143 ~K~C~~~~C~~~C~ngG~C-v---~P~~C~C~~Gw~G~~C~~~~  182 (188)
T 2ygo_A          143 FKTCQQAECPGGCRNGGFC-N---ERRICECPDGFHGPHCEGTK  182 (188)
T ss_dssp             EEEECCCCCTTCCCTTCEE-C---TTSCEECCTTCBTTTTCBC-
T ss_pred             cccccCCccCCCCCCCCEe-C---CCCcccCcCCCCCCCCcCCc
Confidence            3467778899999999999 3   35589999999999998653

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.84  E-value=0.00073  Score=47.05  Aligned_cols=32  Identities=6%  Similarity=0.072  Sum_probs=25.8

Q ss_pred             CCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        104 ICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       104 ~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      +|.++++|..... ...|.|.|++||+|.+|+.
T Consensus        10 pC~ngg~C~~~~~-~~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           10 YCLNGGVXMHIES-LDSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCSSSCEEEECTT-TSSEEEECCTTEETTTTCE
T ss_pred             CCCCCCEEEeecC-CCCEEEEcCCCCcCCcCCc
Confidence            8999999983211 2378999999999999986

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.82  E-value=0.00026  Score=52.98  Aligned_cols=40  Identities=15%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             cCCCCCCCCCCCCCC--CccccCCCCCCceeecCCCCcc-ccccce
Q psy10559         94 CEDPECCSNHICRSS--QLCVSAPKPIDILLRKQPPAIT-ASFFER  136 (418)
Q Consensus        94 C~dpdCc~~~~C~~~--~~C~~~~~~~~~~~C~C~~G~~-g~~Ce~  136 (418)
                      |.+.+.|..++|.++  ++|++..+   .|.|.|++||+ |..|+.
T Consensus         8 ~~~~d~C~snPC~nga~gtC~~~~g---~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B            8 SETPAACSSNPCGPEAAGTCKETNS---GYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             TTSCCHHHHCSSCSSSCCEEEECSS---EEEEECCTTEEEEECSSS
T ss_pred             cCCCCcCcCCCCcCCCccccccCCC---ceEeECCCCCccCCCCCC
Confidence            456677778899998  89999876   89999999999 998875

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.63  E-value=0.00079  Score=48.81  Aligned_cols=28  Identities=32%  Similarity=0.872  Sum_probs=24.7

Q ss_pred             cCCCCCcEEe--c----ceEeeCCCCcCCCCCcC
Q psy10559         12 LWCNEHGQCK--N----GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus        12 ~pC~n~G~C~--~----g~C~C~~G~~G~~Ce~~   39 (418)
                      +||.|+|+|.  +    ++|.|++||+|.+|+..
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~   45 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR   45 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence            5899999997  3    69999999999999853

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.61  E-value=0.0015  Score=57.92  Aligned_cols=77  Identities=23%  Similarity=0.484  Sum_probs=49.3

Q ss_pred             CCCCCcEEecCC-CCCceE-EcCCCCCCCCCCccccccCCCCccCCCCCc----cccCCCCCCCCCCCCCC------Ccc
Q psy10559         44 SCSNHGQCRVNS-DSQWEC-KCSDGWDGKDCSVLLEQNCNDGKDNDKDGL----VDCEDPECCSNHICRSS------QLC  111 (418)
Q Consensus        44 ~C~~~G~C~~~~-~g~~~C-~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~----~~C~dpdCc~~~~C~~~------~~C  111 (418)
                      +|.++++|.... .+.+.| .|+.||+|..|+.     |.+++-.+....    ..|.      ...|.++      +.|
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-----C~~g~~g~~~~~~~~~~~C~------~C~C~~~~~~~~~~~C   70 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-----CDDGYFGDPLGSNGPVRLCR------PCQCNDNIDPNAVGNC   70 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-----ECTTEEEETTCTTSSCEEEE------ECCSTTCBCTTCSCCB
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-----CCCCCcCCcccccCCCCCCe------eCcCCCCCCcccCCcc
Confidence            688999995433 267899 7999999999984     666654332111    1221      1223333      456


Q ss_pred             ccCCCCCCceee-cCCCCccccccce
Q psy10559        112 VSAPKPIDILLR-KQPPAITASFFER  136 (418)
Q Consensus       112 ~~~~~~~~~~~C-~C~~G~~g~~Ce~  136 (418)
                      ....+     .| .|.++|+|.+|++
T Consensus        71 ~~~tG-----~C~~C~~g~~G~~Ce~   91 (162)
T 1klo_A           71 NRLTG-----ECLKCIYNTAGFYCDR   91 (162)
T ss_dssp             CTTTC-----CBCCBCTTEETTTTCE
T ss_pred             cCCCC-----cccCCCCCCcCCCcCc
Confidence            54333     58 4999999999986

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.58  E-value=0.00056  Score=59.85  Aligned_cols=40  Identities=30%  Similarity=0.894  Sum_probs=34.3

Q ss_pred             CCcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559         36 CTLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        36 Ce~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      |+.+.| +++|.++|+| .+..+.|.|.|++||.|..|+...
T Consensus       117 Ce~~~c~~~~C~~~g~C-~~~~~~~~c~C~~g~~G~~Ce~~~  157 (162)
T 1g1s_A          117 CYTASCQDMSCSKQGEC-LETIGNYTCSCYPGFYGPECEYVR  157 (162)
T ss_dssp             EEECCCCTTGGGGSEEE-EECSSSEEEEECTTEESTTSCEEC
T ss_pred             EEeCCCcCCCCCCCCEE-ecCCCCceEeCCCCCcCcccccCc
Confidence            445678 7889999999 677889999999999999999654

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=96.51  E-value=0.002  Score=56.37  Aligned_cols=54  Identities=24%  Similarity=0.581  Sum_probs=35.5

Q ss_pred             CCCCCcEEecc-------eEeeCCCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         13 WCNEHGQCKNG-------TCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        13 pC~n~G~C~~g-------~C~C~~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      +|.|+|+|.+.       .|.|++||.|++|+++...       .|..+....|+........|..|.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~-------~C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK-------TCYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC-------CEECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc-------cCCCCCccccccceecCCcCCccc
Confidence            78999999652       7999999999999865321       232222335666666666777665

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.45  E-value=0.0013  Score=47.31  Aligned_cols=27  Identities=26%  Similarity=0.840  Sum_probs=23.9

Q ss_pred             cCCCCCcEEec--------ceEeeCCCCcCCCCCc
Q psy10559         12 LWCNEHGQCKN--------GTCLCVTGWNGKHCTL   38 (418)
Q Consensus        12 ~pC~n~G~C~~--------g~C~C~~G~~G~~Ce~   38 (418)
                      +||.|+|+|.+        ++|.|++||+|.+|+.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            48999999973        4899999999999984

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=96.43  E-value=0.00045  Score=74.42  Aligned_cols=46  Identities=30%  Similarity=0.733  Sum_probs=40.8

Q ss_pred             EeeCCCCcCCCCC-cCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         25 CLCVTGWNGKHCT-LEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        25 C~C~~G~~G~~Ce-~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      ..|.+||.|++|. ...|+..|.+||.| .+    ..|.|.+||.|..|+..
T Consensus       520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C-~~----G~C~Cd~G~~G~~C~~~  566 (725)
T 2e26_A          520 FDKQQTWAIDNVYIGDGCLDMCSGHGRC-VQ----GSCVCDEQWGGLYCDEP  566 (725)
T ss_dssp             CCTTCCEEEEEEEEESCSSGGGGGSEEE-ET----TEEEECTTEESTTSCEE
T ss_pred             CccCCCcccccccccCCCCcccCCCcEE-CC----CCEeeCCCccCCCcCcc
Confidence            4799999999999 48999999999999 43    38999999999999854

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.39  E-value=0.003  Score=53.55  Aligned_cols=60  Identities=20%  Similarity=0.416  Sum_probs=42.5

Q ss_pred             CCCCCcEEecCCC--CCc-eEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCCccccCCCCCCc
Q psy10559         44 SCSNHGQCRVNSD--SQW-ECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQLCVSAPKPIDI  120 (418)
Q Consensus        44 ~C~~~G~C~~~~~--g~~-~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~~C~~~~~~~~~  120 (418)
                      +|.|+|+| .+..  ..+ .|.|++||+|..|++....                         .|..+      .  ...
T Consensus         2 pC~nggtC-~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~-------------------------~C~~g------~--G~~   47 (122)
T 2fd6_A            2 DCLNGGTC-VSNKYFSNIHWCNCPKKFGGQHCEIDKSK-------------------------TCYEG------N--GHF   47 (122)
T ss_dssp             CCCSSCEE-EECTTTTTCEEEECCTTEESTTSCEESSC-------------------------CSBCS------S--CTT
T ss_pred             CCCCcCCc-CCCcccCCCCCccCCCCCCCccccccCcC-------------------------CCccc------c--ccc
Confidence            69999999 5542  455 8999999999999976521                         12221      1  125


Q ss_pred             eeecCCCCcccccccee
Q psy10559        121 LLRKQPPAITASFFERM  137 (418)
Q Consensus       121 ~~C~C~~G~~g~~Ce~~  137 (418)
                      |++.+..+++|..|++.
T Consensus        48 YrG~~~~t~sG~~Cq~W   64 (122)
T 2fd6_A           48 YRGKASTDTMGRPCLPW   64 (122)
T ss_dssp             CCSCCCBBTTSCBBCCT
T ss_pred             ceeeccccccCCcccCc
Confidence            77788888888888763

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.15  E-value=0.0027  Score=46.86  Aligned_cols=26  Identities=27%  Similarity=0.896  Sum_probs=19.8

Q ss_pred             CCCCCcEEe--c------ceEeeCCCCcCCCCCc
Q psy10559         13 WCNEHGQCK--N------GTCLCVTGWNGKHCTL   38 (418)
Q Consensus        13 pC~n~G~C~--~------g~C~C~~G~~G~~Ce~   38 (418)
                      +|.|+|+|.  +      +.|.|++||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            788888886  1      3788888888888873

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.07  E-value=0.0016  Score=48.11  Aligned_cols=33  Identities=24%  Similarity=0.652  Sum_probs=26.9

Q ss_pred             CCCCCcEEec-C--CCCCceEEcCCCCCCCCCCccc
Q psy10559         44 SCSNHGQCRV-N--SDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        44 ~C~~~G~C~~-~--~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +|.|+|+|.. +  ..+.|.|.|++||+|..|+...
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence            7999999942 2  3557899999999999999654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=95.73  E-value=0.0047  Score=66.76  Aligned_cols=50  Identities=32%  Similarity=1.029  Sum_probs=41.5

Q ss_pred             cEEec----ceEeeCCCCc---CCCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559         18 GQCKN----GTCLCVTGWN---GKHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus        18 G~C~~----g~C~C~~G~~---G~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      ..|.+    +.|.|++||.   |..|+ +++|  +.+|.  ..| .+..++|.|.|.+||.+.
T Consensus       306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C-~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          306 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLC-VNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             TTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTC-CBCSSCBCCCCCSSCBCC
T ss_pred             CCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc--ccc-ccCCCCeeeeeecccccC
Confidence            36765    6999999998   78896 7889  56786  479 788999999999999863

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.65  E-value=0.0054  Score=67.46  Aligned_cols=55  Identities=31%  Similarity=0.974  Sum_probs=43.6

Q ss_pred             cCCCCCc-----EEec----ceEeeCCCCc---CCCCC-cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         12 LWCNEHG-----QCKN----GTCLCVTGWN---GKHCT-LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        12 ~pC~n~G-----~C~~----g~C~C~~G~~---G~~Ce-~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      ++|.+++     .|.+    +.|.|++||.   |..|+ +++|  +..|.  ..| .+..|+|.|.|.+||.+
T Consensus       313 ~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C-~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          313 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLC-VNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             CSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTC-CBCSSCBCCCCCSSEEC
T ss_pred             ccccccccCccccccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--Cee-ecCCCCceeecCCCCEe
Confidence            3565433     7875    6999999994   88997 7899  45565  579 78899999999999975

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.58  E-value=0.0038  Score=65.91  Aligned_cols=37  Identities=27%  Similarity=0.903  Sum_probs=32.2

Q ss_pred             CCC-CCCCCCCcEEecC-CCCCceEEcC-CCCCCCCCCccc
Q psy10559         39 EGC-PNSCSNHGQCRVN-SDSQWECKCS-DGWDGKDCSVLL   76 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~-~~g~~~C~C~-~G~~G~~C~~~~   76 (418)
                      +.| +++|.|+|+| .+ ..++|.|.|. +||+|..|+...
T Consensus         3 d~C~~~PC~ngG~C-~~~~~~~y~C~C~~~G~~G~~Ce~~~   42 (553)
T 1q4g_A            3 NPCCYYPCQHQGIC-VRFGLDRYQCDCTRTGYSGPNCTIPE   42 (553)
T ss_dssp             CGGGGCCCCTTCEE-EEETTTEEEEECTTSSEETTTTCEEC
T ss_pred             CcCCCCCCCCCCCc-CCCCCCceEeeCCCCCcCCCCCCCCc
Confidence            467 8999999999 56 6788999999 999999999765

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=95.50  E-value=0.0027  Score=54.97  Aligned_cols=39  Identities=38%  Similarity=1.061  Sum_probs=33.0

Q ss_pred             CCcCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         36 CTLEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        36 Ce~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      |+.+.| +++|.++|.| .+.-+.|.|.|.+||+|..|+..
T Consensus       117 Ce~~~~~~~pc~~~g~C-~~~~~~~~c~C~~g~~g~~Ce~~  156 (157)
T 1g1t_A          117 CYTAACTNTSCSGHGEC-VETINNYTCKCDPGFSGLKCEQI  156 (157)
T ss_dssp             EEECCCCTTGGGGSEEE-EEETTEEEEEECTTEESTTSCEE
T ss_pred             eCcCCCCCCCCCCCCEe-ecCCCCeeEECCCCccCcccccc
Confidence            345678 7789999999 66678999999999999999864

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=95.46  E-value=0.015  Score=58.54  Aligned_cols=88  Identities=18%  Similarity=0.206  Sum_probs=44.4

Q ss_pred             CCCCCcEE-ecCCCCCceEEcCCCCCCCCCCccccccCCCCccCCCCCccccCCCCCCCCCCCCCCC-ccccCCC----C
Q psy10559         44 SCSNHGQC-RVNSDSQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKDGLVDCEDPECCSNHICRSSQ-LCVSAPK----P  117 (418)
Q Consensus        44 ~C~~~G~C-~~~~~g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~~~C~~~~-~C~~~~~----~  117 (418)
                      .|++|+.+ ..+..+.+.|.|..||.|..|+.-.     +|.-++......|.++.-|....|..++ .|.....    .
T Consensus       256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~-----~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~  330 (375)
T 4aqt_A          256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCL-----PFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRST  330 (375)
T ss_dssp             CCTTSCSCEEECTTSCEEECCCTTEESTTSCEEC-----TTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHS
T ss_pred             cCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCC-----CCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccC
Confidence            46666643 2344566789999999999998533     3322221111122222222222333222 2211000    0


Q ss_pred             CCceee-cCCCCccccccce
Q psy10559        118 IDILLR-KQPPAITASFFER  136 (418)
Q Consensus       118 ~~~~~C-~C~~G~~g~~Ce~  136 (418)
                      ...-.| .|.++++|..|++
T Consensus       331 ~~~G~C~~C~~n~~G~~Ce~  350 (375)
T 4aqt_A          331 GHGGHCTNCRDNTDGAKCER  350 (375)
T ss_dssp             SCCEEECSCTTTEESTTSCE
T ss_pred             CCCCCCCCCCCCCcCCCCCC
Confidence            012256 5999999999986

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=95.43  E-value=0.011  Score=59.99  Aligned_cols=71  Identities=24%  Similarity=0.592  Sum_probs=51.6

Q ss_pred             CCCCCcE-Eec--------ceEeeCCCCcCCCCCc------------------CCC-CCCCCCCcE-EecC---------
Q psy10559         13 WCNEHGQ-CKN--------GTCLCVTGWNGKHCTL------------------EGC-PNSCSNHGQ-CRVN---------   54 (418)
Q Consensus        13 pC~n~G~-C~~--------g~C~C~~G~~G~~Ce~------------------~~C-~~~C~~~G~-C~~~---------   54 (418)
                      .|++|+. |..        +.|.|..++.|.+|+.                  ..| +..|.+|+. |..+         
T Consensus       267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s  346 (403)
T 2y38_A          267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREAS  346 (403)
T ss_dssp             CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCC
T ss_pred             ccCCCccccCCCCCCCccceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCccccccccc
Confidence            5777775 852        5699999999999982                  258 778888764 7322         


Q ss_pred             ------CCCCceEE-cCCCCCCCCCCccccccCCCCccCCC
Q psy10559         55 ------SDSQWECK-CSDGWDGKDCSVLLEQNCNDGKDNDK   88 (418)
Q Consensus        55 ------~~g~~~C~-C~~G~~G~~C~~~~~~~C~~g~c~~~   88 (418)
                            ..+++.|. |..++.|..|+     .|.+|+-.+.
T Consensus       347 ~~~~~~~~~~G~C~~C~~nt~G~~CE-----rC~~GYyg~p  382 (403)
T 2y38_A          347 QNQDNVYQGGGVCLDCQHHTTGINCE-----RCLPGFFRAP  382 (403)
T ss_dssp             CCTTSCSCCCEEESSCCSSEESTTSC-----EECTTCEECT
T ss_pred             ccccccCCCCCCCCCCcCcCcCCCCC-----cCCCCccCCC
Confidence                  13567996 99999999998     4666655443

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.25  E-value=0.0067  Score=64.43  Aligned_cols=37  Identities=32%  Similarity=0.960  Sum_probs=30.8

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcC-CCCCCCCCCcc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCS-DGWDGKDCSVL   75 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~-~G~~G~~C~~~   75 (418)
                      +.| +++|.|+|+|.....++|.|.|. +||+|..|+..
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   40 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence            568 89999999994233578999999 99999999975

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=95.24  E-value=0.0053  Score=66.21  Aligned_cols=57  Identities=26%  Similarity=0.619  Sum_probs=42.4

Q ss_pred             cCCCcCCCCCcEEecceEeeCCCCcCCCCCcCCC--CCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559          8 DVDLLWCNEHGQCKNGTCLCVTGWNGKHCTLEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus         8 d~C~~pC~n~G~C~~g~C~C~~G~~G~~Ce~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      ..|+..|.+||.|.+|.|.|.+||.|+.|....|  +..|+  ++.  + .+  . . .++|.+..|.
T Consensus       535 ~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~~~~~~~--~~F--e-t~--~-~-~~~W~~v~gg  593 (725)
T 2e26_A          535 DGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETSLPTQLK--DNF--N-RA--P-S-NQNWLTVSGG  593 (725)
T ss_dssp             SCSSGGGGGSEEEETTEEEECTTEESTTSCEESSCCCSCEE--ECC--S-SC--C-C-TTTEEEEESE
T ss_pred             CCCCcccCCCcEECCCCEeeCCCccCCCcCccCCCCchhhh--ccc--c-CC--c-c-CCCceecCCc
Confidence            5688999999999999999999999999986655  55565  333  1 11  1 2 6777776665

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.87  E-value=0.012  Score=62.41  Aligned_cols=32  Identities=31%  Similarity=0.708  Sum_probs=28.1

Q ss_pred             ccCCC-cCCCCCcEEec-----ceEeeC-CCCcCCCCCc
Q psy10559          7 IDVDL-LWCNEHGQCKN-----GTCLCV-TGWNGKHCTL   38 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~-----g~C~C~-~G~~G~~Ce~   38 (418)
                      +++|. +||.|+|+|.+     +.|.|. +||+|.+|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            47895 59999999984     699999 9999999985

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=94.36  E-value=0.023  Score=51.60  Aligned_cols=39  Identities=23%  Similarity=0.543  Sum_probs=30.9

Q ss_pred             cccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccceee
Q psy10559         92 VDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMK  138 (418)
Q Consensus        92 ~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~~  138 (418)
                      -.|..+.|  ...|.|+|.|+. |+     .|.|++||+|..|+..+
T Consensus       144 K~C~~~~C--~~~C~ngG~Cv~-P~-----~C~C~~Gw~G~~C~~~~  182 (188)
T 2ygo_A          144 KTCQQAEC--PGGCRNGGFCNE-RR-----ICECPDGFHGPHCEGTK  182 (188)
T ss_dssp             EEECCCCC--TTCCCTTCEECT-TS-----CEECCTTCBTTTTCBC-
T ss_pred             ccccCCcc--CCCCCCCCEeCC-CC-----cccCcCCCCCCCCcCCc
Confidence            35777776  467999999987 44     59999999999999753

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=93.89  E-value=0.02  Score=57.61  Aligned_cols=70  Identities=27%  Similarity=0.624  Sum_probs=44.5

Q ss_pred             CCCCCcEEe--c----ceEeeCCCCcCCCCCc--C----------------CC-CCCCCCCc-EEecC------CCCCce
Q psy10559         13 WCNEHGQCK--N----GTCLCVTGWNGKHCTL--E----------------GC-PNSCSNHG-QCRVN------SDSQWE   60 (418)
Q Consensus        13 pC~n~G~C~--~----g~C~C~~G~~G~~Ce~--~----------------~C-~~~C~~~G-~C~~~------~~g~~~   60 (418)
                      .|++||.+.  +    +.|.|.+||.|.+|+.  +                .| +..|.++| .|..+      ..+++.
T Consensus       256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~  335 (375)
T 4aqt_A          256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGH  335 (375)
T ss_dssp             CCTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEE
T ss_pred             cCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCC
Confidence            477777542  1    5799999999999983  1                23 33454444 22110      134567


Q ss_pred             EE-cCCCCCCCCCCccccccCCCCccCC
Q psy10559         61 CK-CSDGWDGKDCSVLLEQNCNDGKDND   87 (418)
Q Consensus        61 C~-C~~G~~G~~C~~~~~~~C~~g~c~~   87 (418)
                      |. |..||+|..|+     .|.+|+-++
T Consensus       336 C~~C~~n~~G~~Ce-----~C~~Gyyg~  358 (375)
T 4aqt_A          336 CTNCRDNTDGAKCE-----RCRENFFRL  358 (375)
T ss_dssp             ECSCTTTEESTTSC-----EECSSEECC
T ss_pred             CCCCCCCCcCCCCC-----CCCcCcccC
Confidence            84 99999999997     466665543

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.82  E-value=0.035  Score=39.68  Aligned_cols=35  Identities=11%  Similarity=0.059  Sum_probs=27.4

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCccccccceee
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMK  138 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~~  138 (418)
                      .+.|.++ .|..... .+.+.|.|++||+|.+||...
T Consensus        13 ~~yC~nG-~C~~~~~-~~~~~C~C~~gy~G~RCe~~d   47 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQ-EDKPACVCHSGYVGARCEHAD   47 (50)
T ss_pred             cCcccCC-EEeeccC-CCCeEEECCCCCcccCCCcee
Confidence            4568887 8986543 456789999999999999753

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.61  E-value=0.056  Score=38.61  Aligned_cols=31  Identities=29%  Similarity=0.807  Sum_probs=16.9

Q ss_pred             CCCCCCcEEe-cCCCCCceEEcCCCCCCCCCCc
Q psy10559         43 NSCSNHGQCR-VNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        43 ~~C~~~G~C~-~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +.|.+ |+|. +...+.+.|.|+.||+|.+|+.
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            44553 4663 2334455666666666666653

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.38  E-value=0.016  Score=59.19  Aligned_cols=27  Identities=33%  Similarity=0.827  Sum_probs=0.0

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      .+|.++|+| .+..   +|.|++||+|..|+
T Consensus       371 ~~C~ngg~C-~~~~---~C~C~~G~~G~~Ce  397 (426)
T 3zyj_B          371 LHCQNGGTC-HNNV---RCLCPAAYTGILCE  397 (426)
T ss_dssp             -------------------------------
T ss_pred             ccCCCCCCc-CCCC---CCcCCCCCcCCCCc
Confidence            468888889 4322   89999999998887

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.36  E-value=0.071  Score=38.05  Aligned_cols=31  Identities=29%  Similarity=0.638  Sum_probs=24.7

Q ss_pred             ccCCC----cCCCCCcEEe------cceEeeCCCCcCCCCCc
Q psy10559          7 IDVDL----LWCNEHGQCK------NGTCLCVTGWNGKHCTL   38 (418)
Q Consensus         7 id~C~----~pC~n~G~C~------~g~C~C~~G~~G~~Ce~   38 (418)
                      .++|+    +.|.| |+|.      ...|.|+.||+|++|+.
T Consensus         9 ~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A            9 KNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             CCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcccCchhhCcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            35675    58986 7996      25899999999999974

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=93.32  E-value=0.025  Score=59.74  Aligned_cols=40  Identities=10%  Similarity=0.155  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCCCcccc-CCCCCCceeecCC-CCccccccceeeee
Q psy10559         98 ECCSNHICRSSQLCVS-APKPIDILLRKQP-PAITASFFERMKFL  140 (418)
Q Consensus        98 dCc~~~~C~~~~~C~~-~~~~~~~~~C~C~-~G~~g~~Ce~~~fl  140 (418)
                      +.|..++|.|+|+|.. ..+   .|.|.|+ +||+|..||...+.
T Consensus         3 d~C~~~PC~ngG~C~~~~~~---~y~C~C~~~G~~G~~Ce~~~~~   44 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLD---RYQCDCTRTGYSGPNCTIPEIW   44 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTT---EEEEECTTSSEETTTTCEECHH
T ss_pred             CcCCCCCCCCCCCcCCCCCC---ceEeeCCCCCcCCCCCCCCchh
Confidence            4567789999999998 554   8999999 99999999985543

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.24  E-value=0.036  Score=39.56  Aligned_cols=32  Identities=31%  Similarity=0.867  Sum_probs=18.6

Q ss_pred             CCCCCCcEEe-cCCCCCceEEcCCCCCCCCCCcc
Q psy10559         43 NSCSNHGQCR-VNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        43 ~~C~~~G~C~-~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      +.|.+ |+|. ....+.+.|.|+.||+|.+|+..
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~   46 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV   46 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence            45665 5662 23344566777777777777643

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=93.24  E-value=0.025  Score=49.13  Aligned_cols=42  Identities=14%  Similarity=0.236  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         92 VDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        92 ~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +.|+-.. |...+|.+++.|.+..+   .|.|.|++||+|.+||..
T Consensus       115 fICe~~~-c~~~~C~~~g~C~~~~~---~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          115 ALCYTAS-CQDMSCSKQGECLETIG---NYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             EEEEECC-CCTTGGGGSEEEEECSS---SEEEEECTTEESTTSCEE
T ss_pred             EEEEeCC-CcCCCCCCCCEEecCCC---CceEeCCCCCcCcccccC
Confidence            5555444 34567999999998766   899999999999999874

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=93.05  E-value=0.066  Score=46.64  Aligned_cols=32  Identities=31%  Similarity=0.754  Sum_probs=26.1

Q ss_pred             CCCCCcEEecCC--CCCc-eEEcCCCCCCCCCCccc
Q psy10559         44 SCSNHGQCRVNS--DSQW-ECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        44 ~C~~~G~C~~~~--~g~~-~C~C~~G~~G~~C~~~~   76 (418)
                      +|.|+|+| ...  ...+ .|.|++||.|..|++..
T Consensus        14 pC~NGGtC-~~~~~~s~~~~C~Cp~g~~G~~Cei~~   48 (145)
T 2i9a_A           14 DCLNGGTC-VSNKYFSNIHWCNCPKKFGGQHCEIDK   48 (145)
T ss_dssp             CCCTTCEE-EECSSSTTCEEEECCTTEESTTSCEES
T ss_pred             CCCCCCCc-CCCccccCCccccCCCCCCCCceeccc
Confidence            79999999 443  2445 79999999999999766

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=92.70  E-value=0.059  Score=38.43  Aligned_cols=34  Identities=15%  Similarity=0.091  Sum_probs=26.2

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      .+.|.+ |.|.-... .+.+.|.|++||+|.+||..
T Consensus        13 ~~yC~n-G~C~~~~~-~~~~~C~C~~gy~G~RCe~~   46 (50)
T 1iox_A           13 KHYCIK-GRCRFVVA-EQTPSCVCDEGYIGARCERV   46 (50)
T ss_dssp             TTSCTT-CCEEEETT-TTEEEECCCTTEETTTTCEE
T ss_pred             cCcccC-CEEEeEcC-CCCeEEECCCCcccCCCCee
Confidence            356888 68964433 44678999999999999974

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=92.38  E-value=0.029  Score=56.42  Aligned_cols=27  Identities=37%  Similarity=1.006  Sum_probs=14.0

Q ss_pred             CCCCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559         40 GCPNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus        40 ~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      .|++.|++||.| .+    ..|.|.+||.|..
T Consensus       193 ~Cp~~CsGhG~C-~~----g~C~Cd~G~~g~d  219 (387)
T 2ddu_A          193 PCPSYCSGHGDC-IS----GVCFCDLGYTAAQ  219 (387)
T ss_dssp             CCGGGGGGSEEE-ET----TEEEECTTEEEET
T ss_pred             cCccccCCCcee-cC----CeEEecCCcccCC
Confidence            345555555555 21    2555555555553

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=91.62  E-value=0.13  Score=36.63  Aligned_cols=33  Identities=27%  Similarity=0.722  Sum_probs=23.5

Q ss_pred             CCCCCCCcEEecC-CCCCceEEcCCCCCCCCCCcc
Q psy10559         42 PNSCSNHGQCRVN-SDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        42 ~~~C~~~G~C~~~-~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .+.|.+ |+|... ..+.+.|.|..||+|.+|+..
T Consensus        13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~   46 (50)
T 3e50_C           13 TQFCFH-GTCRFLVQEDKPACVCHSGYVGARCEHA   46 (50)
T ss_pred             cCcccC-CEEeeccCCCCeEEECCCCCcccCCCce
Confidence            356776 488432 346778999999999999843

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=91.28  E-value=0.27  Score=49.73  Aligned_cols=82  Identities=20%  Similarity=0.358  Sum_probs=48.0

Q ss_pred             CCCCCcE-EecCC-C--CCceEEcCCCCCCCCCCccccccCCCCccCCCC------CccccCCCCCCCCCCCCCCC-ccc
Q psy10559         44 SCSNHGQ-CRVNS-D--SQWECKCSDGWDGKDCSVLLEQNCNDGKDNDKD------GLVDCEDPECCSNHICRSSQ-LCV  112 (418)
Q Consensus        44 ~C~~~G~-C~~~~-~--g~~~C~C~~G~~G~~C~~~~~~~C~~g~c~~~~------G~~~C~dpdCc~~~~C~~~~-~C~  112 (418)
                      .|++|+. |.... .  ....|.|..++.|..|+     .|..|+-.+-.      ....|      ....|.+++ .|.
T Consensus       267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE-----rC~pGy~g~p~~~at~~~~~~C------~pC~Cnghs~~C~  335 (403)
T 2y38_A          267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD-----RCCPGFNQQPWKPATTDSANEC------QSCNCHGHAYDCY  335 (403)
T ss_dssp             CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCC-----EECTTCCSSCCCCCCSSCCCCC------CCCCCTTSCSCEE
T ss_pred             ccCCCccccCCCCCCCccceEeECcCcCcCCCCC-----CCCccccCCcccccccCCCccc------cccccCCCCcccc
Confidence            5777765 84321 1  13469999999999998     47776655421      11233      233454433 353


Q ss_pred             cCC------C-------CCCceeec-CCCCccccccce
Q psy10559        113 SAP------K-------PIDILLRK-QPPAITASFFER  136 (418)
Q Consensus       113 ~~~------~-------~~~~~~C~-C~~G~~g~~Ce~  136 (418)
                      ..+      +       ....-.|. |.++++|..||+
T Consensus       336 ~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CEr  373 (403)
T 2y38_A          336 YDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCER  373 (403)
T ss_dssp             ECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCE
T ss_pred             cCcccccccccccccccCCCCCCCCCCcCcCcCCCCCc
Confidence            110      0       01134685 999999999996

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=91.13  E-value=0.051  Score=52.53  Aligned_cols=31  Identities=26%  Similarity=0.826  Sum_probs=25.7

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +++|   ...|..++.| .|..|+|.|.|.+||.|
T Consensus         5 iDEC~~~~~~C~~~a~C-~Nt~Gsy~C~C~~Gy~G   38 (285)
T 1gl4_A            5 QQTCANNRHQCSVHAEC-RDYATGFCCRCVANYTG   38 (285)
T ss_dssp             --CHHHHGGGSCTTEEE-EECSSCEEEEECTTEEE
T ss_pred             chhccCCCCCCCCCCEe-EcCCCCeEEEcCCCCCC
Confidence            4677   4679999999 88899999999999985

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=90.92  E-value=0.11  Score=51.93  Aligned_cols=40  Identities=33%  Similarity=0.788  Sum_probs=32.8

Q ss_pred             CCC--cCCC-CCCCCCCcEEecCCCCCceEEcCC-CCCCCCCCcc
Q psy10559         35 HCT--LEGC-PNSCSNHGQCRVNSDSQWECKCSD-GWDGKDCSVL   75 (418)
Q Consensus        35 ~Ce--~~~C-~~~C~~~G~C~~~~~g~~~C~C~~-G~~G~~C~~~   75 (418)
                      .|+  .+.| +++|.++|+| ....+.|.|.|+. ||.|+.|+..
T Consensus       180 gC~~~~~~C~~~pC~n~g~C-~~~~~~~~C~C~~~~~~G~~C~~~  223 (410)
T 3asi_A          180 GCEGPSTTCQEDSCSNQGVC-LQQWDGFSCDCSMTSFSGPLCNDP  223 (410)
T ss_dssp             SCCCCSSCCCTTSSSTTCEE-EECSSSEEEECTTTSEESTTSCEE
T ss_pred             CCCCCCCCcccccCCCCCEe-cCCCCCceEeccCCcccCCCCCCC
Confidence            454  3578 8899999999 6667889999996 9999999853

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.92  E-value=0.094  Score=41.04  Aligned_cols=31  Identities=29%  Similarity=0.802  Sum_probs=19.5

Q ss_pred             CCCCCCcEEe-cCCCCCceEEcCCCCCCCCCCc
Q psy10559         43 NSCSNHGQCR-VNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        43 ~~C~~~G~C~-~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +.|.+ |+|. ....+.+.|.|.+||+|..|+.
T Consensus        46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG   77 (79)
T ss_dssp             TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred             CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence            56765 4772 1223456788888888877764

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.75  E-value=0.076  Score=41.59  Aligned_cols=34  Identities=9%  Similarity=0.128  Sum_probs=25.8

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      .+.|.++ .|....+ .+.+.|.|++||+|.+||..
T Consensus        45 ~~yClnG-~C~~i~~-~~~~~C~C~~GYtG~RCE~l   78 (79)
T 1xdt_R           45 KDFCIHG-ECKYVKE-LRAPSCICHPGYHGERCHGL   78 (79)
T ss_dssp             TTCCSSE-EECCBGG-GTBCCEEECTTEESTTCCEE
T ss_pred             cCcCCCC-EeeeecC-CCCeEEEcCCCccccccccc
Confidence            5679886 8964432 33578999999999999863

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=90.37  E-value=0.12  Score=36.34  Aligned_cols=24  Identities=25%  Similarity=0.657  Sum_probs=19.9

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      .+|.  +.| .+..|+|.|.|++||.+
T Consensus        20 ~~C~--~~C-~n~~Gsy~C~C~~Gy~~   43 (53)
T 1apq_A           20 PQCQ--HLC-HNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             CTTS--SEE-EEETTEEEEECSTTCEE
T ss_pred             CCCC--CEe-ECCCCCeEEECCCCCeE
Confidence            4575  489 78889999999999975

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=88.14  E-value=0.2  Score=38.15  Aligned_cols=27  Identities=22%  Similarity=0.309  Sum_probs=14.2

Q ss_pred             cccCCC---cCCCCCcEEec----ceEee-CCCCc
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLC-VTGWN   32 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C-~~G~~   32 (418)
                      ++|||.   .+|.++++|+|    ++|.| ..||.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~   36 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVI   36 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCC
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCccc
Confidence            456663   24665566654    45653 34554

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=88.02  E-value=0.25  Score=47.68  Aligned_cols=26  Identities=31%  Similarity=0.816  Sum_probs=21.2

Q ss_pred             CCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         45 CSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        45 C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      |+++|.|..     +.|.|.+||.|..|+-.
T Consensus       198 C~g~G~~~C-----G~C~C~~g~~G~~CeC~  223 (280)
T 2p26_A          198 CHGKGFLEC-----GICRCDTGYIGKNCECQ  223 (280)
T ss_dssp             GGGSEEEET-----TEEEECTTEESTTSCEE
T ss_pred             cCCCCeECC-----CceeCCCCCcCCcceec
Confidence            788888842     37999999999999843

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=87.59  E-value=0.18  Score=43.69  Aligned_cols=42  Identities=12%  Similarity=0.152  Sum_probs=33.3

Q ss_pred             cccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559         92 VDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus        92 ~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      +.|+-+.| ...+|.+++.|.....   .|.|.|.+||.|..|+.+
T Consensus       115 fICe~~~~-~~~~C~~~g~C~~~~~---~~~c~C~~g~~g~~C~~~  156 (164)
T 3cfw_A          115 ALCYTASC-QPWSCSGHGECVEIIN---NYTCNCDVGYYGPQCQFV  156 (164)
T ss_dssp             EEEEECCC-CTTSSCSSEEEEEETT---EEEEEECTTCBSSSSCBC
T ss_pred             eEEccCCC-CCCcCCCCCeecccCC---CceeeeCCCccccccccc
Confidence            55654443 3477999999998766   899999999999999863

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=87.40  E-value=0.16  Score=43.57  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=33.2

Q ss_pred             cccCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559         92 VDCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus        92 ~~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      +.|+-+.| ...+|.+++.|.+...   .|.|.|.+||+|.+||.
T Consensus       115 fICe~~~~-~~~pc~~~g~C~~~~~---~~~c~C~~g~~g~~Ce~  155 (157)
T 1g1t_A          115 ALCYTAAC-TNTSCSGHGECVETIN---NYTCKCDPGFSGLKCEQ  155 (157)
T ss_dssp             EEEEECCC-CTTGGGGSEEEEEETT---EEEEEECTTEESTTSCE
T ss_pred             eEeCcCCC-CCCCCCCCCEeecCCC---CeeEECCCCccCccccc
Confidence            55655544 4568999999998766   89999999999999986

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=87.37  E-value=0.3  Score=48.87  Aligned_cols=31  Identities=23%  Similarity=0.520  Sum_probs=26.5

Q ss_pred             cCCC-cCCCCCcEEec----ceEeeCC-CCcCCCCCc
Q psy10559          8 DVDL-LWCNEHGQCKN----GTCLCVT-GWNGKHCTL   38 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~----g~C~C~~-G~~G~~Ce~   38 (418)
                      +.|. +||.|+|+|.+    +.|.|+. ||.|+.|+.
T Consensus       186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred             CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence            5674 59999999985    7999996 999999974

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=86.38  E-value=0.41  Score=33.50  Aligned_cols=24  Identities=17%  Similarity=0.261  Sum_probs=20.2

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                      .+|.  ..|++.++   +|.|.|++||.+
T Consensus        20 ~~C~--~~C~n~~G---sy~C~C~~Gy~~   43 (53)
T 1apq_A           20 PQCQ--HLCHNYVG---GYFCSCRPGYEL   43 (53)
T ss_dssp             CTTS--SEEEEETT---EEEEECSTTCEE
T ss_pred             CCCC--CEeECCCC---CeEEECCCCCeE
Confidence            4575  48999988   899999999976

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=86.29  E-value=0.72  Score=37.50  Aligned_cols=60  Identities=17%  Similarity=0.573  Sum_probs=43.7

Q ss_pred             CCC-cCCCCCcEEec-----ceEeeCCCCcC--CCCCc---CCCC---CCCCCCcEEecCCC----CCceEEcCCCCC
Q psy10559          9 VDL-LWCNEHGQCKN-----GTCLCVTGWNG--KHCTL---EGCP---NSCSNHGQCRVNSD----SQWECKCSDGWD   68 (418)
Q Consensus         9 ~C~-~pC~n~G~C~~-----g~C~C~~G~~G--~~Ce~---~~C~---~~C~~~G~C~~~~~----g~~~C~C~~G~~   68 (418)
                      .|. ..|..+..|..     .+|.|.+||.|  ..|..   ..|.   ..|..++.|.....    +...|.|.+|+.
T Consensus         6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C            6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            453 47888999965     48999999985  45653   3672   34888999965433    568899999964

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=86.27  E-value=1.6  Score=50.02  Aligned_cols=41  Identities=12%  Similarity=0.218  Sum_probs=0.0

Q ss_pred             ccCCCCCCCCCCCCCCCccccCCCCCCceeecCCC-Cccccccce
Q psy10559         93 DCEDPECCSNHICRSSQLCVSAPKPIDILLRKQPP-AITASFFER  136 (418)
Q Consensus        93 ~C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~-G~~g~~Ce~  136 (418)
                      .|....+|...+|.|++.|....+   .+.|.|++ ||.|.+|+.
T Consensus       186 pC~~~~~~~~~~C~ngg~C~~~~~---~~~C~C~~~g~~G~~Ce~  227 (1245)
T 3qcw_A          186 PCEAGEEGEGGVCLNGGVCSVVDD---QAVCDCSRTGFRGKDCSQ  227 (1245)
T ss_dssp             ---------------------------------------------
T ss_pred             CcCCcccCCCCCCCCCCCCccCCC---CceeECCCCCccCCcccc
Confidence            466556778889999999987655   68899997 999999995

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=86.25  E-value=0.81  Score=37.21  Aligned_cols=74  Identities=19%  Similarity=0.401  Sum_probs=47.2

Q ss_pred             CCCCCCCcEEecCCCCCceEEcCCCCCCC--CCCccccccCCCCccCCCCCccccCCCCCCCC-CCCCCCCccccCCC--
Q psy10559         42 PNSCSNHGQCRVNSDSQWECKCSDGWDGK--DCSVLLEQNCNDGKDNDKDGLVDCEDPECCSN-HICRSSQLCVSAPK--  116 (418)
Q Consensus        42 ~~~C~~~G~C~~~~~g~~~C~C~~G~~G~--~C~~~~~~~C~~g~c~~~~G~~~C~dpdCc~~-~~C~~~~~C~~~~~--  116 (418)
                      ...|..++.|.....+...|+|.+||.|+  .|....                   .+.|-.. +-|..++.|.....  
T Consensus         9 ~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~-------------------~~sC~~nNGGCd~nA~C~~~~~~~   69 (99)
T 1ob1_C            9 KKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP-------------------NPTCNENNGGCDADAKCTEEDSGS   69 (99)
T ss_dssp             SCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECS-------------------CCCSTTGGGGCCTTEEEECCSCSS
T ss_pred             cCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCC-------------------CCChhhcCCCcCCCceeEecCCcc
Confidence            45688899995545788899999999863  232211                   1233222 44788888887631  


Q ss_pred             CCCceeecCCCCcccccc
Q psy10559        117 PIDILLRKQPPAITASFF  134 (418)
Q Consensus       117 ~~~~~~C~C~~G~~g~~C  134 (418)
                      ......|.|.+||+-+.+
T Consensus        70 ~~~ki~C~C~~g~~~~~~   87 (99)
T 1ob1_C           70 NGKKITCECTKPDSYPLF   87 (99)
T ss_dssp             SSCCCEEEECSTTCCEEG
T ss_pred             cCCceEeEeCCCCcccce
Confidence            123567999998755433

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=85.31  E-value=0.26  Score=47.59  Aligned_cols=32  Identities=25%  Similarity=0.739  Sum_probs=24.4

Q ss_pred             cccCCC---cCCCCCcEEec----ceEeeCCCCc--CCCCC
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLCVTGWN--GKHCT   37 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C~~G~~--G~~Ce   37 (418)
                      ++|||.   .+|..++.|.|    +.|.|++||.  |..|.
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~   44 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV   44 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred             cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence            688995   48999999987    6999999998  55664

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=84.35  E-value=0.46  Score=54.60  Aligned_cols=36  Identities=33%  Similarity=0.830  Sum_probs=30.6

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcC-CCCCCCCCCcc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCS-DGWDGKDCSVL   75 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~-~G~~G~~C~~~   75 (418)
                      +.| +++|.++|+| ....++|.|.|+ +||+|+.|+..
T Consensus      1018 ~~C~~~pC~ngG~C-~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A         1018 TTCQEDSCSNQGVC-LQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp             CCCCTTSSSSSCEE-EEETTEEEEECTTSSCBSTTSCBC
T ss_pred             CceECCcCCCCCEe-CCCCCCCEEECCCCCCCCCCccCC
Confidence            568 8899999999 555678999999 69999999853

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=83.09  E-value=0.38  Score=34.46  Aligned_cols=22  Identities=23%  Similarity=0.782  Sum_probs=17.1

Q ss_pred             CCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         44 SCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        44 ~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      .|.  ..| .+..|+|.|.|++||.
T Consensus        10 ~C~--~~C-~nt~Gsy~C~C~~Gy~   31 (55)
T 2jkh_L           10 DCD--QFC-HEEQNSVVCSCARGYT   31 (55)
T ss_dssp             GCS--SEE-EEETTEEEEECCTTEE
T ss_pred             CcC--cEe-EcCCCCeEEeCCCCCE
Confidence            464  378 6778889999999985

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=82.55  E-value=0.24  Score=49.75  Aligned_cols=26  Identities=31%  Similarity=0.921  Sum_probs=24.5

Q ss_pred             cCCCcCCCCCcEEecceEeeCCCCcC
Q psy10559          8 DVDLLWCNEHGQCKNGTCLCVTGWNG   33 (418)
Q Consensus         8 d~C~~pC~n~G~C~~g~C~C~~G~~G   33 (418)
                      ..|++.|++||.|.++.|.|.+||.|
T Consensus       192 ~~Cp~~CsGhG~C~~g~C~Cd~G~~g  217 (387)
T 2ddu_A          192 EPCPSYCSGHGDCISGVCFCDLGYTA  217 (387)
T ss_dssp             SCCGGGGGGSEEEETTEEEECTTEEE
T ss_pred             ccCccccCCCceecCCeEEecCCccc
Confidence            36999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	418
d1l3ya_	41	g.3.11.6 (A:) Integrin beta EGF-like domains {Huma	7e-05
d1l3ya_	41	g.3.11.6 (A:) Integrin beta EGF-like domains {Huma	7e-05
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	8e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	0.001
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	0.002
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.003
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	0.003
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.004
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	0.004
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.004

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 7e-05
 Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 15/55 (27%)

Query: 19 QCKNGTCLCVTGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS 73
          +C    C     +NG+ C            G C        +C+C  G++G  C 
Sbjct: 1  ECDTINCE---RYNGQVC-------GGPGRGLCFCG-----KCRCHPGFEGSACQ 40

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 7e-05
 Identities = 8/23 (34%), Positives = 9/23 (39%)

Query: 14 CNEHGQCKNGTCLCVTGWNGKHC 36
              G C  G C C  G+ G  C
Sbjct: 17 GPGRGLCFCGKCRCHPGFEGSAC 39

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 8e-04
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 35 HCTLEGCPNSCSN----HGQCRVNSDSQWECKCSDGWDGKDC 72
           C +    + C++    HG C ++    + C C  GW+G+ C
Sbjct: 1  QCLVLPLEHPCASLCCGHGTC-IDGIGSFSCDCRSGWEGRFC 41

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV 74
           N C + G+C +N+   +EC+C  G+ G  C +
Sbjct: 10 ANPCEHAGKC-INTLGSFECQCLQGYTGPRCEI 41

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 41 CPNSCSNHGQCRVNSDSQWECKCSD-GWDGKDCSV 74
          C N C N G+C      Q++C C+  G+ G++C+ 
Sbjct: 5  CSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV 74
           N C N   C ++   +++C C  G++G  C V
Sbjct: 6  SNPCQNDATC-LDQIGEFQCICMPGYEGVHCEV 37

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV 74
           N C N G C  +  + +EC C  G++GK+C +
Sbjct: 8  SNPCLNGGSC-KDDINSYECWCPFGFEGKNCEL 39

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDC 72
           + C N G C  +    + C C   ++G++C
Sbjct: 7  SSPCQNGGSC-KDQLQSYICFCLPAFEGRNC 36

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.3 bits (76), Expect = 0.004
 Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 42 PNSCSNHGQCR-VNSDSQWECKCSDGWDGKDC 72
             C N G C  + S   + C C  G+ G  C
Sbjct: 11 DGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV 74
           + C N G+C  +   ++ C C +G++GK+C +
Sbjct: 5  TSPCQNQGKC-KDGLGEYTCTCLEGFEGKNCEL 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	418
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.39
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.32
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.3
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.27
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.27
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.24
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.23
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.2
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.16
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.13
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.11
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.09
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.05
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.03
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.97
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.9
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.84
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.82
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.79
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.74
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.69
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.61
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.56
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.53
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.24
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	97.18
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.14
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.11
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.99
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.87
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	96.76
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	96.69
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.62
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.52
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	96.4
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	96.22
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.94
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.92
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.83
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.51
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.42
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.41
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	95.27
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.25
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	95.2
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.06
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.06
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.05
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	94.95
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.69
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	94.54
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.17
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	94.14
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.01
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.98
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.68
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	92.65
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	92.49
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	91.49
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.13
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	90.04
d1nt0a3	45	Mannose-binding protein associated serine protease	88.97
d1szba2	45	Mannose-binding protein associated serine protease	88.95
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	88.72
d1h8la1	79	Carboxypeptidase D C-terminal domain {Crested duck	88.08
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	87.08
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	86.86
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	86.21
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	85.17
d1uwya1	107	Carboxypeptidase M C-terminal domain {Human (Homo	82.19
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	81.79

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=8.1e-08  Score=64.18  Aligned_cols=36  Identities=31%  Similarity=0.983  Sum_probs=27.2

Q ss_pred             cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         38 LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        38 ~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +++| +++|.++|+| ++..++|+|.|++||+|..|+.
T Consensus         1 Id~C~~~PC~n~g~C-~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           1 VNECVSNPCQNDATC-LDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CCTTTTCCCCSSCEE-EECSSCEEEECCTTEESSSSCE
T ss_pred             CcCCcCCCCCCCCEE-ECCCCCEEEeCCCCCccCcCee
Confidence            3567 7788888888 5667778888888888888874

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.7e-07  Score=62.60  Aligned_cols=36  Identities=31%  Similarity=1.091  Sum_probs=29.1

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      ++| ++||.++|+| .+..++|.|.|++||+|..|++.
T Consensus         1 D~C~~~PC~ngg~C-~~~~~~y~C~C~~G~~G~~Cei~   37 (39)
T d1xkba1           1 DQCETSPCQNQGKC-KDGLGEYTCTCLEGFEGKNCELF   37 (39)
T ss_dssp             CTTTTCCCCSSCEE-CCCSSSCCEECCTTEETTTTCEE
T ss_pred             CcCCCCCCCCCcEE-ECCCCCEEEECCCCCCcCcCeEc
Confidence            357 7888888888 66677888888888888888864

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.9e-07  Score=62.37  Aligned_cols=34  Identities=38%  Similarity=1.037  Sum_probs=21.4

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      ++| +++|.++|+| .+..++|.|.|++||+|..|+
T Consensus         4 d~C~~~PC~ngg~C-~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           4 DQCESNPCLNGGSC-KDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CTTTTCCCCTTCEE-EEETTEEEEECCTTCCSTTSC
T ss_pred             ccCCCCCCCCCcEE-EcCCCCEEEECCCCCCCCCCC
Confidence            455 6666666666 445566666666666666665

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.2e-07  Score=61.21  Aligned_cols=33  Identities=36%  Similarity=0.710  Sum_probs=29.5

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~   38 (418)
                      ++|+|. +||.|+|+|++    ++|.|.+||+|++|++
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCCC
Confidence            578995 59999999986    7999999999999984

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2e-07  Score=62.20  Aligned_cols=33  Identities=24%  Similarity=0.793  Sum_probs=29.5

Q ss_pred             ccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCcC
Q psy10559          7 IDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~   39 (418)
                      ||+|. +||.|+|+|++    ++|.|++||+|.+|+++
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~d   38 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN   38 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCeeC
Confidence            68895 59999999986    79999999999999864

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.24  E-value=2.6e-07  Score=60.94  Aligned_cols=30  Identities=27%  Similarity=0.881  Sum_probs=14.6

Q ss_pred             CCCCCCCcEEecCCCCCceEEcCCCCCCCCC
Q psy10559         42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDC   72 (418)
Q Consensus        42 ~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C   72 (418)
                      +++|.++|+| .+..++|.|.|++||+|..|
T Consensus         7 ~~PC~ngg~C-~~~~~~y~C~C~~g~~G~~C   36 (37)
T d2c4fl1           7 SSPCQNGGSC-KDQLQSYICFCLPAFEGRNC   36 (37)
T ss_dssp             GCCCCTTCEE-EEETTEEEEECCTTEESTTS
T ss_pred             CCCCCCCCEE-ECCCCCeEEECCCCCcCCCC
Confidence            4445555555 33344455555555555544

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.8e-07  Score=62.44  Aligned_cols=36  Identities=33%  Similarity=1.092  Sum_probs=24.8

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +++|   +++|.++|+| .+..++|.|.|++||+|..|++
T Consensus         3 ideC~~~~~pC~n~g~C-~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKC-INTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CCTTTSSSCSSSTTCEE-EECSSSEEEECCTTEESTTSCE
T ss_pred             CccccCCCCCCCCCcEe-ECCCCCEEeECCCCCcCCCCcC
Confidence            3455   4667777777 5667777777777777777764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.9e-07  Score=59.29  Aligned_cols=34  Identities=26%  Similarity=1.023  Sum_probs=25.3

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      ++| +++|.++|+| ++..++|+|.|++||+|..|+
T Consensus         1 d~C~~~PC~ngg~C-~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRC-LDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEE-EECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEE-ECCCCCeEEECCCCCCCCCcC
Confidence            356 7778888888 566677888888888887775

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.16  E-value=2.5e-07  Score=61.03  Aligned_cols=32  Identities=28%  Similarity=0.771  Sum_probs=28.8

Q ss_pred             cccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCC
Q psy10559          6 NIDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCT   37 (418)
Q Consensus         6 ~id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce   37 (418)
                      ++|+|. +||.|+|+|++    ++|.|++||+|.+||
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            578995 59999999986    799999999999996

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=5.8e-07  Score=60.86  Aligned_cols=34  Identities=29%  Similarity=0.791  Sum_probs=30.2

Q ss_pred             cccCCC---cCCCCCcEEec----ceEeeCCCCcCCCCCcC
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~   39 (418)
                      ++|+|.   +||.++|+|++    ++|.|++||+|.+|+++
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~d   42 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID   42 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCcCc
Confidence            688995   59999999987    79999999999999853

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=2.5e-07  Score=61.73  Aligned_cols=35  Identities=40%  Similarity=1.104  Sum_probs=26.4

Q ss_pred             CC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         40 GC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .| +++|.++|+| ++..++|.|.|++||+|..|+..
T Consensus         3 ~C~~~pC~ngg~C-~~~~~~~~C~C~~g~~G~~Ce~~   38 (39)
T d1g1ta2           3 ACTNTSCSGHGEC-VETINNYTCKCDPGFSGLKCEQI   38 (39)
T ss_dssp             CCCTTGGGGSEEE-EEETTEEEEEECTTEESTTSCEE
T ss_pred             cccCCcCCCCcEE-ECCCCCEEEeCCCCCcCcCcCcc
Confidence            46 7778888888 55567788888888888888753

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6.9e-07  Score=59.53  Aligned_cols=32  Identities=41%  Similarity=0.884  Sum_probs=28.2

Q ss_pred             cCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCcC
Q psy10559          8 DVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~   39 (418)
                      |+|. +||.|+|+|++    ++|.|.+||+|++|+++
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei~   37 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF   37 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTCEE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCeEc
Confidence            5785 59999999986    79999999999999864

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=6.2e-07  Score=60.08  Aligned_cols=36  Identities=31%  Similarity=0.936  Sum_probs=28.6

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      +.| +++|.++|+| ++..++|.|.|++||+|..|+..
T Consensus         2 ~~C~~~pC~ngg~C-~~~~~~y~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGEC-LETIGNYTCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEE-EECSSSEEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEE-ECCCCCeEEeCCCCccCCCCCCC
Confidence            356 7888888888 56677888888888888888753

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.3e-06  Score=56.77  Aligned_cols=30  Identities=33%  Similarity=0.714  Sum_probs=26.8

Q ss_pred             cCCC-cCCCCCcEEec----ceEeeCCCCcCCCCC
Q psy10559          8 DVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCT   37 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce   37 (418)
                      |+|. +||.|+|+|++    ++|.|++||+|++||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            5784 59999999986    799999999999996

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2e-06  Score=59.74  Aligned_cols=36  Identities=28%  Similarity=0.982  Sum_probs=30.8

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCccc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +.| +++|.+ |+| .+..++|.|.|++||+|..|+..+
T Consensus         9 ~~C~~~PC~n-G~C-~~~~~~y~C~C~~G~~G~~Ce~~I   45 (48)
T d1autl1           9 HPCASLCCGH-GTC-IDGIGSFSCDCRSGWEGRFCQREV   45 (48)
T ss_dssp             CSSSSTTTTS-EEE-CCCSSCCCEEECTTEESTTSCEEC
T ss_pred             CcccCCCCCC-CEE-ECCCCCCeEeCCCCCcCCCccccc
Confidence            568 889985 899 677888999999999999999765

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5.9e-06  Score=55.46  Aligned_cols=35  Identities=31%  Similarity=0.790  Sum_probs=26.9

Q ss_pred             CCCCCCCcEEecC-CCCCceEEcCCCCCCCCCCccc
Q psy10559         42 PNSCSNHGQCRVN-SDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        42 ~~~C~~~G~C~~~-~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +++|.|+|+|... ..+.|.|.|++||+|..|++.+
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~   38 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   38 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCc
Confidence            6888888888432 2457889999999998888765

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.4e-06  Score=55.66  Aligned_cols=29  Identities=31%  Similarity=0.830  Sum_probs=25.7

Q ss_pred             CcCCCCCcEEec------ceEeeCCCCcCCCCCcC
Q psy10559         11 LLWCNEHGQCKN------GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus        11 ~~pC~n~G~C~~------g~C~C~~G~~G~~Ce~~   39 (418)
                      ++||.|+|+|++      +.|.|++||+|++|+++
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~   37 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID   37 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBC
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcC
Confidence            469999999974      58999999999999864

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.82  E-value=4.1e-06  Score=56.56  Aligned_cols=36  Identities=25%  Similarity=0.873  Sum_probs=21.0

Q ss_pred             CCC-CCCCCCCcEEecCCCCCceEEcCC-CCCCCCCCc
Q psy10559         39 EGC-PNSCSNHGQCRVNSDSQWECKCSD-GWDGKDCSV   74 (418)
Q Consensus        39 ~~C-~~~C~~~G~C~~~~~g~~~C~C~~-G~~G~~C~~   74 (418)
                      +.| +++|.|+|+|.....++|.|.|.. ||+|..|++
T Consensus         3 d~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             ccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            345 566666666632224556666654 666666664

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=3.2e-06  Score=56.17  Aligned_cols=31  Identities=32%  Similarity=0.752  Sum_probs=27.3

Q ss_pred             cCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCc
Q psy10559          8 DVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~   38 (418)
                      +.|. +||.|+|+|++    ++|.|++||+|++|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcCc
Confidence            4674 59999999986    7999999999999984

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.74  E-value=5e-06  Score=56.12  Aligned_cols=33  Identities=27%  Similarity=0.730  Sum_probs=28.1

Q ss_pred             ccCCC-cCCCCCcEEec-----ceEeeCC-CCcCCCCCcC
Q psy10559          7 IDVDL-LWCNEHGQCKN-----GTCLCVT-GWNGKHCTLE   39 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~-----g~C~C~~-G~~G~~Ce~~   39 (418)
                      +++|. +||.|+|+|++     ++|.|.. ||+|.+|+++
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~p   41 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCcC
Confidence            57885 69999999964     6999986 9999999864

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=9.8e-06  Score=54.33  Aligned_cols=35  Identities=34%  Similarity=1.028  Sum_probs=21.7

Q ss_pred             CC-CCCCCCCcEEecCCCCCceEEcC-CCCCCCCCCc
Q psy10559         40 GC-PNSCSNHGQCRVNSDSQWECKCS-DGWDGKDCSV   74 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~~~~g~~~C~C~-~G~~G~~C~~   74 (418)
                      .| +++|.|+|+|.....++|.|.|. +||+|..|+.
T Consensus         3 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             cCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            45 66777777773222456777775 4777777764

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=1.2e-05  Score=53.97  Aligned_cols=32  Identities=31%  Similarity=0.711  Sum_probs=27.2

Q ss_pred             cCCC-cCCCCCcEEec-----ceEeeC-CCCcCCCCCcC
Q psy10559          8 DVDL-LWCNEHGQCKN-----GTCLCV-TGWNGKHCTLE   39 (418)
Q Consensus         8 d~C~-~pC~n~G~C~~-----g~C~C~-~G~~G~~Ce~~   39 (418)
                      |+|. +||.|+|+|++     ++|.|+ +||+|.+|+++
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~p   40 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCcC
Confidence            6784 69999999964     699996 69999999864

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=8.9e-06  Score=54.24  Aligned_cols=36  Identities=14%  Similarity=0.250  Sum_probs=31.6

Q ss_pred             CCCCCCCCCCccccCCCCCCceeecCCCCccccccceee
Q psy10559        100 CSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMK  138 (418)
Q Consensus       100 c~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~~  138 (418)
                      |..++|.++++|+...+   .|.|.|++||+|.+||.++
T Consensus         4 C~~~pC~ngg~C~~~~~---~y~C~C~~g~~G~~Ce~~~   39 (40)
T d1g1sa2           4 CQDMSCSKQGECLETIG---NYTCSCYPGFYGPECEYVR   39 (40)
T ss_dssp             CCTTGGGGSEEEEECSS---SEEEEECTTEESTTSCEEC
T ss_pred             ccCCcCCCCcEEECCCC---CeEEeCCCCccCCCCCCCc
Confidence            56778999999998776   8999999999999999753

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.9e-05  Score=54.66  Aligned_cols=32  Identities=34%  Similarity=0.870  Sum_probs=27.1

Q ss_pred             ccCCC-cCCCCCcEEec----ceEeeCCCCcCCCCCcC
Q psy10559          7 IDVDL-LWCNEHGQCKN----GTCLCVTGWNGKHCTLE   39 (418)
Q Consensus         7 id~C~-~pC~n~G~C~~----g~C~C~~G~~G~~Ce~~   39 (418)
                      .++|. +||.| |+|.+    ++|.|++||+|++|+.+
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~~   44 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQRE   44 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSCEE
T ss_pred             CCcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCcccc
Confidence            56885 59986 99986    79999999999999843

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=4.2e-05  Score=55.89  Aligned_cols=37  Identities=30%  Similarity=0.744  Sum_probs=29.5

Q ss_pred             CC-CCCCCCCcEEe----cCCCCCceEEcCCCCCCCCCCccc
Q psy10559         40 GC-PNSCSNHGQCR----VNSDSQWECKCSDGWDGKDCSVLL   76 (418)
Q Consensus        40 ~C-~~~C~~~G~C~----~~~~g~~~C~C~~G~~G~~C~~~~   76 (418)
                      +| .++|.|+|+|.    .+..+.|.|.|++||+|.+|+..+
T Consensus         8 ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~   49 (63)
T d1haea_           8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV   49 (63)
T ss_dssp             HHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred             CCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCC
Confidence            45 68899999993    244567899999999999999766

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=8.7e-05  Score=47.71  Aligned_cols=27  Identities=30%  Similarity=0.854  Sum_probs=22.4

Q ss_pred             CCCCCcEEecc-------eEeeCCCCcCCCCCcC
Q psy10559         13 WCNEHGQCKNG-------TCLCVTGWNGKHCTLE   39 (418)
Q Consensus        13 pC~n~G~C~~g-------~C~C~~G~~G~~Ce~~   39 (418)
                      .|.|+|+|+.+       .|.|+.+|.|++||+|
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiD   36 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   36 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEec
Confidence            58889999863       7999999999999875

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.00021  Score=50.29  Aligned_cols=36  Identities=28%  Similarity=0.679  Sum_probs=27.6

Q ss_pred             CC-CCCCCCCcEEec-CCCCCceEEcCCCCCCCCCCcc
Q psy10559         40 GC-PNSCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .| +++|.++|+|.. .....+.|.|++||+|..|+..
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~~   45 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR   45 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCccC
Confidence            35 678999999942 3346788999999999999854

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00018  Score=50.67  Aligned_cols=33  Identities=30%  Similarity=0.697  Sum_probs=26.7

Q ss_pred             cccCC-CcCCCCCcEEec------ceEeeCCCCcCCCCCc
Q psy10559          6 NIDVD-LLWCNEHGQCKN------GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         6 ~id~C-~~pC~n~G~C~~------g~C~C~~G~~G~~Ce~   38 (418)
                      +-.+| +++|.|+|+|..      ++|.|++||+|.+|+.
T Consensus         5 ~C~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           5 GCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CCCTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            33445 359999999962      6999999999999984

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=9.7e-05  Score=53.85  Aligned_cols=34  Identities=26%  Similarity=0.643  Sum_probs=27.6

Q ss_pred             ccccCCC-cCCCCCcEEe-----c----ceEeeCCCCcCCCCCc
Q psy10559          5 SNIDVDL-LWCNEHGQCK-----N----GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         5 ~~id~C~-~pC~n~G~C~-----~----g~C~C~~G~~G~~Ce~   38 (418)
                      ...++|. ++|.|+|+|.     +    +.|.|++||+|++|+.
T Consensus         4 ~~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_           4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             EECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             ccCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            3456664 6999999994     2    5899999999999983

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0002  Score=49.31  Aligned_cols=36  Identities=22%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             CC-CCCCCCCcEEec-CCCCCceEEcCCCCCCCCCCcc
Q psy10559         40 GC-PNSCSNHGQCRV-NSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        40 ~C-~~~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .| .++|.++|+|.. .....+.|.|+.||+|..|+..
T Consensus         6 ~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~~   43 (48)
T d1nqlb_           6 LSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR   43 (48)
T ss_dssp             STTCCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCcC
Confidence            35 567888888842 2345678888888888888753

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00012  Score=48.76  Aligned_cols=23  Identities=35%  Similarity=0.933  Sum_probs=20.4

Q ss_pred             CCCcEEecceEeeCCCCcCCCCC
Q psy10559         15 NEHGQCKNGTCLCVTGWNGKHCT   37 (418)
Q Consensus        15 ~n~G~C~~g~C~C~~G~~G~~Ce   37 (418)
                      ++||+|..|+|.|.+||+|+.|+
T Consensus        18 ~~hG~C~~G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          18 PGRGLCFCGKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HHHEEEETTEEEECTTCCTTTTC
T ss_pred             CCCCeEECCEEEcCCCCcccCcc
Confidence            34899999999999999999986

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00012  Score=44.85  Aligned_cols=25  Identities=48%  Similarity=1.291  Sum_probs=21.9

Q ss_pred             CCCCCcEEecceEeeCCCCcCCCCC
Q psy10559         13 WCNEHGQCKNGTCLCVTGWNGKHCT   37 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~~G~~G~~Ce   37 (418)
                      .|.+||.|.-|.|+|..||+|+.|.
T Consensus         4 ~C~ghG~C~CG~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSCGDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCSTTTCCCTTEESSSSC
T ss_pred             eccCCCcccCCceEccCCccccccc
Confidence            5888999988999999999999885

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0003  Score=48.39  Aligned_cols=37  Identities=8%  Similarity=0.099  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCccccCCCCCCceeecCCCCcccccccee
Q psy10559        100 CSNHICRSSQLCVSAPKPIDILLRKQPPAITASFFERM  137 (418)
Q Consensus       100 c~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~  137 (418)
                      |..++|.|+|+|..... ...|.|.|++||+|.+||..
T Consensus         7 c~~~~C~ngG~C~~~~~-~~~~~C~C~~gy~G~~Ce~~   43 (48)
T d1nqlb_           7 SHDGYCLHDGVCMYIEA-LDKYACNCVVGYIGERCQYR   43 (48)
T ss_dssp             TTCCEECTTCEEEEETT-TTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCCcEEeeeCC-CCCeEEeCCCCcccCCCCcC
Confidence            34568999999987554 24789999999999999974

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0008  Score=45.11  Aligned_cols=35  Identities=11%  Similarity=0.116  Sum_probs=29.2

Q ss_pred             cCCCCCCCCCCCCCCCccccCCCCCCceeecCCCCccc
Q psy10559         94 CEDPECCSNHICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus        94 C~dpdCc~~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                      |.|.++|....+..++.|+|.++   +|.|.|++||..
T Consensus         2 CvDidEC~~~~~~~~~~C~Nt~G---sy~C~C~~Gy~~   36 (43)
T d1emoa1           2 AVDMDECKEPDVCKHGQCINTDG---SYRCECPFGYIL   36 (43)
T ss_dssp             CCCCCSSSSTTSCSSSCCCCCSS---CCCCCCCTTEEE
T ss_pred             CcceeccCCcCCCCCCEeECCCC---CeEeECCCCccc
Confidence            66778887766667789999998   899999999964

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0012  Score=44.13  Aligned_cols=26  Identities=35%  Similarity=1.083  Sum_probs=23.0

Q ss_pred             CCCCCcEEecceEeeC-CCCcCCCCCc
Q psy10559         13 WCNEHGQCKNGTCLCV-TGWNGKHCTL   38 (418)
Q Consensus        13 pC~n~G~C~~g~C~C~-~G~~G~~Ce~   38 (418)
                      .|++||+|..|.|+|. +||.|+.|+.
T Consensus        12 iCng~G~C~cG~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          12 LCSGRGKCECGSCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             GGGGTEEEETTEEEECCSSCBSTTSCB
T ss_pred             EECCCCEEECCEeEeCCCCccCCcccc
Confidence            4999999999999995 7999999974

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.00048  Score=45.74  Aligned_cols=33  Identities=30%  Similarity=0.880  Sum_probs=24.4

Q ss_pred             CCCcCCCCCcCCCCCCCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         29 TGWNGKHCTLEGCPNSCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        29 ~G~~G~~Ce~~~C~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      +.|.|..|.       |++||+|. .    ..|.|.+||+|+.|+
T Consensus         8 ~~~~g~~C~-------g~~hG~C~-~----G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_           8 ERYNGQVCG-------GPGRGLCF-C----GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             CCSSSSSSS-------HHHHEEEE-T----TEEEECTTCCTTTTC
T ss_pred             CCCCCccCC-------CCCCCeEE-C----CEEEcCCCCcccCcc
Confidence            345565542       55689993 2    389999999999997

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.00083  Score=45.28  Aligned_cols=32  Identities=41%  Similarity=1.158  Sum_probs=24.5

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCCCC
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDGKD   71 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~   71 (418)
                      +++|   +..|. ++.| .|..|+|.|.|++||.+..
T Consensus         3 idEC~~~~~~C~-~~~C-~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           3 IDECRISPDLCG-RGQC-VNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCTTTTCSSTTT-TSCE-EEETTEEEECCCSSEEECT
T ss_pred             ccccCCCCCCCC-CCEe-EcCCCCeEEeCCCCCccCC
Confidence            5677   33464 6789 8889999999999997643

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0012  Score=44.00  Aligned_cols=30  Identities=30%  Similarity=0.916  Sum_probs=22.6

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +++|   +..|. +|.| ++..|+|+|.|++||..
T Consensus         2 idEC~~~~~~C~-~~~C-~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVC-HNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             CCHHHHCSSTTT-TSEE-EEETTEEEEESCTTSCC
T ss_pred             ccccCCCCCCCC-CCEe-ECCCCCeEEeCCCCCeE
Confidence            3556   44564 6789 78889999999999874

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0012  Score=44.13  Aligned_cols=31  Identities=32%  Similarity=0.901  Sum_probs=23.7

Q ss_pred             cCCC-CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         38 LEGC-PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        38 ~~~C-~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +++| ...+..+++| .+..|+|.|.|++||.+
T Consensus         5 idEC~~~~~~~~~~C-~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPDVCKHGQC-INTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTTSCSSSCC-CCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcCCCCCCEe-ECCCCCeEeECCCCccc
Confidence            6778 3344456789 88899999999999963

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0032  Score=43.47  Aligned_cols=33  Identities=21%  Similarity=0.470  Sum_probs=25.7

Q ss_pred             CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCc
Q psy10559         42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        42 ~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      .+.|.++|.|.+...+.+.|.|+.||+|..|+.
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            456888888855556778899999999988874

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0018  Score=43.34  Aligned_cols=30  Identities=30%  Similarity=1.015  Sum_probs=21.9

Q ss_pred             cCCC---CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         38 LEGC---PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        38 ~~~C---~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +++|   +..|. ++.| ++..|+|.|.|++||..
T Consensus         3 inEC~~~~~~c~-~~~C-~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2           3 IDECQELPGLCQ-GGKC-INTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             CCHHHHCGGGGB-TSEE-EECSSCEEEECCTTCCB
T ss_pred             cccccCCCCCcC-CCEE-ECCCCCeEeECCCCCeE
Confidence            4556   34464 5689 78899999999999863

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0051  Score=41.64  Aligned_cols=31  Identities=35%  Similarity=0.734  Sum_probs=18.2

Q ss_pred             CCCCCCcEEec-CCCCCceEEcCCCCCCCCCCc
Q psy10559         43 NSCSNHGQCRV-NSDSQWECKCSDGWDGKDCSV   74 (418)
Q Consensus        43 ~~C~~~G~C~~-~~~g~~~C~C~~G~~G~~C~~   74 (418)
                      +.|.+ |.|.. ...+.+.|.|+.||+|.+|+.
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            45665 55522 234556677777777777764

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0014  Score=40.00  Aligned_cols=25  Identities=44%  Similarity=1.234  Sum_probs=21.5

Q ss_pred             CCCCCcEEecCCCCCceEEcCCCCCCCCCC
Q psy10559         44 SCSNHGQCRVNSDSQWECKCSDGWDGKDCS   73 (418)
Q Consensus        44 ~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~   73 (418)
                      .|.+||.|+..     .|.|.+||+|..|.
T Consensus         4 ~C~ghG~C~CG-----~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSCG-----DCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCST-----TTCCCTTEESSSSC
T ss_pred             eccCCCcccCC-----ceEccCCccccccc
Confidence            58999999543     79999999999986

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0036  Score=42.97  Aligned_cols=34  Identities=18%  Similarity=0.402  Sum_probs=25.6

Q ss_pred             CCCCCCCcEEecCCCCCceEEcCCCCCCCCCCcc
Q psy10559         42 PNSCSNHGQCRVNSDSQWECKCSDGWDGKDCSVL   75 (418)
Q Consensus        42 ~~~C~~~G~C~~~~~g~~~C~C~~G~~G~~C~~~   75 (418)
                      .+.|.++|.|.......+.|.|+.||+|.+|+..
T Consensus        12 ~~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe~~   45 (49)
T d1moxc_          12 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHA   45 (49)
T ss_dssp             SCSSTTEEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred             CCEeeCCeEEecCCCCCcEeECCCCCEecCCccc
Confidence            3568887777555566788999999999988853

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.20  E-value=0.003  Score=41.54  Aligned_cols=27  Identities=26%  Similarity=0.839  Sum_probs=23.7

Q ss_pred             CCCCCCcEEecCCCCCceEEcCCCCCCC
Q psy10559         43 NSCSNHGQCRVNSDSQWECKCSDGWDGK   70 (418)
Q Consensus        43 ~~C~~~G~C~~~~~g~~~C~C~~G~~G~   70 (418)
                      ..|..++.| .+..|+|.|.|.+||.|.
T Consensus         7 ~~C~~~A~C-~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           7 HQCSVHAEC-RDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             GGSCTTEEE-EECSSCEEEEECTTEEEC
T ss_pred             CCCCCCCEe-ecCCCCeEeECCCCCcCC
Confidence            468889999 788999999999999864

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0039  Score=41.50  Aligned_cols=29  Identities=31%  Similarity=1.032  Sum_probs=18.9

Q ss_pred             cCCC--CCCCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         38 LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        38 ~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      +++|  ++.| -++.| ++..|+|.|.|++||.
T Consensus         3 idEC~~~~~~-c~~~C-~Nt~G~y~C~C~~Gy~   33 (43)
T d1uzka1           3 VNECLDPTTC-ISGNC-VNTPGSYICDCPPDFE   33 (43)
T ss_dssp             CCGGGSTTSS-BTSEE-EEETTEEEEECCTTCE
T ss_pred             ccccCCCCcC-cCCEe-ECCCCCEEEecCCCCE
Confidence            4555  3333 25678 6777888888888874

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0069  Score=40.96  Aligned_cols=31  Identities=32%  Similarity=0.754  Sum_probs=24.3

Q ss_pred             ccCCC----cCCCCCcEEe---c---ceEeeCCCCcCCCCCc
Q psy10559          7 IDVDL----LWCNEHGQCK---N---GTCLCVTGWNGKHCTL   38 (418)
Q Consensus         7 id~C~----~pC~n~G~C~---~---g~C~C~~G~~G~~Ce~   38 (418)
                      +.+|+    ++|.| |.|.   +   ..|.|++||+|++|+.
T Consensus         3 i~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_           3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             eeeCCCcCCCcCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            44564    48987 8884   1   6899999999999974

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0051  Score=41.25  Aligned_cols=30  Identities=33%  Similarity=0.658  Sum_probs=24.0

Q ss_pred             ccccCCC---cCCCCCcEEec----ceEeeCCCCcCCC
Q psy10559          5 SNIDVDL---LWCNEHGQCKN----GTCLCVTGWNGKH   35 (418)
Q Consensus         5 ~~id~C~---~pC~n~G~C~~----g~C~C~~G~~G~~   35 (418)
                      +++|||.   ..|. +++|.|    +.|.|++||.+..
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            5799995   2675 689997    7999999998754

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0075  Score=38.49  Aligned_cols=33  Identities=21%  Similarity=0.207  Sum_probs=27.8

Q ss_pred             CCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        104 ICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       104 ~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      .|.|++.|+...--..+.+|.||.+|.|.+||-
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEi   35 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   35 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEe
Confidence            589999999865545578999999999999985

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.0084  Score=41.25  Aligned_cols=37  Identities=11%  Similarity=0.091  Sum_probs=28.6

Q ss_pred             CCCCCCCCccccCCCCCCceeecCCCCccccccceeeee
Q psy10559        102 NHICRSSQLCVSAPKPIDILLRKQPPAITASFFERMKFL  140 (418)
Q Consensus       102 ~~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~~~fl  140 (418)
                      .+.|.+++.|.-..  .+.+.|.|+.||+|.+||...++
T Consensus        13 ~~yC~nGgcc~~~~--~~~~~C~C~~gy~G~rCe~~~l~   49 (50)
T d1ioxa_          13 KHYCIKGRCRFVVA--EQTPSCVCDEGYIGARCERVDLF   49 (50)
T ss_dssp             TTSCTTCCEEEETT--TTEEEECCCTTEETTTTCEECCC
T ss_pred             CCCccCCeEEEeCC--CCCcEeECCCCCeeCCCccceec
Confidence            45799989886332  34688999999999999986543

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0073  Score=39.75  Aligned_cols=27  Identities=37%  Similarity=1.212  Sum_probs=20.9

Q ss_pred             CCC--CCCCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         39 EGC--PNSCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        39 ~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      ++|  +++|.  ..| .+..|+|+|.|++||.
T Consensus         2 dEC~~~~~C~--~~C-~n~~Gsy~C~C~~Gy~   30 (41)
T d1i0ua2           2 DECQDPDTCS--QLC-VNLEGGYKCQCEEGFQ   30 (41)
T ss_dssp             CTTTTTTSCS--SCE-ECSSSCCEECCCTTEE
T ss_pred             ccCCCCCCCC--CEe-ECCCCCEEeECCCCCe
Confidence            566  44564  578 7888999999999996

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.011  Score=40.41  Aligned_cols=26  Identities=23%  Similarity=0.657  Sum_probs=22.1

Q ss_pred             cCCCCCcEEe-----cceEeeCCCCcCCCCC
Q psy10559         12 LWCNEHGQCK-----NGTCLCVTGWNGKHCT   37 (418)
Q Consensus        12 ~pC~n~G~C~-----~g~C~C~~G~~G~~Ce   37 (418)
                      +.|.|+|.|.     ...|.|++||.|++||
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEecCCc
Confidence            4799988773     1699999999999998

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.009  Score=39.15  Aligned_cols=29  Identities=31%  Similarity=0.710  Sum_probs=23.0

Q ss_pred             cCCC--CCCCCCCcEEecCCCCCceEEcCCCCCC
Q psy10559         38 LEGC--PNSCSNHGQCRVNSDSQWECKCSDGWDG   69 (418)
Q Consensus        38 ~~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~G   69 (418)
                      +++|  ..+|+  ..| ++..|+|+|.|++||+.
T Consensus         2 idEC~~~~~C~--~~C-~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           2 IDECENGGFCS--GVC-HNLPGTFECICGPDSAL   32 (40)
T ss_dssp             CCHHHHCSSCS--SEE-EECSSSEEEEECSSSSC
T ss_pred             ccccCCCcCcc--CEe-eCCCCCeEeECCCCCee
Confidence            3456  45675  589 88899999999999975

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.014  Score=38.58  Aligned_cols=26  Identities=38%  Similarity=0.765  Sum_probs=21.2

Q ss_pred             cccCCC---cCCCCCcEEec----ceEeeCCCCc
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLCVTGWN   32 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C~~G~~   32 (418)
                      |+|||.   ..|. +|.|.|    ++|.|++||.
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~   33 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ   33 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCe
Confidence            578894   3674 789997    7999999997

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.014  Score=38.67  Aligned_cols=26  Identities=38%  Similarity=0.728  Sum_probs=21.1

Q ss_pred             cccCCC---cCCCCCcEEec----ceEeeCCCCc
Q psy10559          6 NIDVDL---LWCNEHGQCKN----GTCLCVTGWN   32 (418)
Q Consensus         6 ~id~C~---~pC~n~G~C~~----g~C~C~~G~~   32 (418)
                      |+|||.   ..|. +++|+|    +.|.|++||.
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~   34 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYY   34 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCC
T ss_pred             CcccccCCCCCcC-CCEEECCCCCeEeECCCCCe
Confidence            688994   3675 579997    7999999996

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.026  Score=37.23  Aligned_cols=22  Identities=27%  Similarity=0.468  Sum_probs=18.9

Q ss_pred             CCCccccCCCCCCceeecCCCCccc
Q psy10559        107 SSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus       107 ~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                      -++.|++.++   +|.|.|++||..
T Consensus        13 c~~~C~Nt~G---~y~C~C~~Gy~l   34 (43)
T d1uzka1          13 ISGNCVNTPG---SYICDCPPDFEL   34 (43)
T ss_dssp             BTSEEEEETT---EEEEECCTTCEE
T ss_pred             cCCEeECCCC---CEEEecCCCCEE
Confidence            3578999998   999999999954

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.65  E-value=0.016  Score=37.91  Aligned_cols=27  Identities=15%  Similarity=0.186  Sum_probs=23.6

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcccc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITAS  132 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~  132 (418)
                      ..|..++.|++.++   +|.|.|.+||.|.
T Consensus         7 ~~C~~~A~C~Nt~G---sy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           7 HQCSVHAECRDYAT---GFCCRCVANYTGN   33 (40)
T ss_dssp             GGSCTTEEEEECSS---CEEEEECTTEEEC
T ss_pred             CCCCCCCEeecCCC---CeEeECCCCCcCC
Confidence            35888899999988   8999999999883

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.03  Score=38.62  Aligned_cols=20  Identities=25%  Similarity=0.698  Sum_probs=17.7

Q ss_pred             CcEEecCCCCCceEEcCCCCC
Q psy10559         48 HGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        48 ~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      ...| +|+.|+|+|.|++||+
T Consensus        23 ~~~C-~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_          23 QHLC-HNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             SSEE-EEETTEEEEECSTTCE
T ss_pred             cCEe-EcCCCCeEeECCCCCe
Confidence            3579 8889999999999996

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.49  E-value=0.054  Score=35.44  Aligned_cols=15  Identities=33%  Similarity=1.001  Sum_probs=7.2

Q ss_pred             ceEEcCCCCCCCCCC
Q psy10559         59 WECKCSDGWDGKDCS   73 (418)
Q Consensus        59 ~~C~C~~G~~G~~C~   73 (418)
                      ..|.|..||+|.+|+
T Consensus        24 ~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_          24 PSCICHPGYHGERCH   38 (41)
T ss_dssp             CCEEECTTEESTTCC
T ss_pred             ceeECCCCCeecCcc
Confidence            344444444444443

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.041  Score=34.74  Aligned_cols=28  Identities=36%  Similarity=1.070  Sum_probs=22.7

Q ss_pred             CCC--CCCCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         39 EGC--PNSCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        39 ~~C--~~~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      ++|  .++|. +|+| .+..|++.|.|..||.
T Consensus         2 dECsignpCG-nGTC-tNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCG-NGTC-KNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSS-SSCE-EECSSSEEECCSSSSC
T ss_pred             CccccCCccC-Ccee-eecccceEEeecCCcC
Confidence            356  57786 5889 7889999999999985

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.04  E-value=0.067  Score=35.33  Aligned_cols=26  Identities=35%  Similarity=0.892  Sum_probs=21.5

Q ss_pred             CCCCCcEEecCCCCCceEEcC-CCCCCCCCCc
Q psy10559         44 SCSNHGQCRVNSDSQWECKCS-DGWDGKDCSV   74 (418)
Q Consensus        44 ~C~~~G~C~~~~~g~~~C~C~-~G~~G~~C~~   74 (418)
                      .|+++|+|..+     .|.|. +||.|+.|+.
T Consensus        12 iCng~G~C~cG-----~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          12 LCSGRGKCECG-----SCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             GGGGTEEEETT-----EEEECCSSCBSTTSCB
T ss_pred             EECCCCEEECC-----EeEeCCCCccCCcccc
Confidence            49999999433     89995 7999999984

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.97  E-value=0.072  Score=35.37  Aligned_cols=20  Identities=25%  Similarity=0.541  Sum_probs=17.5

Q ss_pred             CcEEecCCCCCceEEcCCCCC
Q psy10559         48 HGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        48 ~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      ...| .+..|+|+|.|++||.
T Consensus        15 ~~~C-~Nt~gsy~C~C~~Gy~   34 (45)
T d1nt0a3          15 DHYC-HNYLGGYYCSCRVGYI   34 (45)
T ss_dssp             SSEE-EEETTEEEEECCTTEE
T ss_pred             CCEe-ecCCCCEEEeCCCCCE
Confidence            4689 7889999999999995

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=0.088  Score=34.93  Aligned_cols=20  Identities=25%  Similarity=0.667  Sum_probs=17.7

Q ss_pred             CcEEecCCCCCceEEcCCCCC
Q psy10559         48 HGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        48 ~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      ...| .+..|+|+|.|++||.
T Consensus        15 ~~~C-~Nt~Gsy~C~C~~Gy~   34 (45)
T d1szba2          15 DHHC-HNHLGGFYCSCRAGYV   34 (45)
T ss_dssp             SSEE-EEETTEEEEECCTTEE
T ss_pred             CCCC-ccCCCCeEEECCCCCe
Confidence            4689 7889999999999996

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.72  E-value=0.057  Score=35.34  Aligned_cols=32  Identities=9%  Similarity=0.083  Sum_probs=25.4

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCccccccce
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAITASFFER  136 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~g~~Ce~  136 (418)
                      +-|.+ |.|....+ ++...|.|+.||+|.+||-
T Consensus         8 ~yCih-G~C~~i~~-l~~~~C~C~~gY~G~RCq~   39 (41)
T d1xdtr_           8 DFCIH-GECKYVKE-LRAPSCICHPGYHGERCHG   39 (41)
T ss_dssp             TCCSS-EEECCBGG-GTBCCEEECTTEESTTCCE
T ss_pred             CEeEC-cEEeecCc-CCCceeECCCCCeecCccc
Confidence            45876 88986654 4567799999999999985

>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase D C-terminal domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=88.08  E-value=0.39  Score=34.84  Aligned_cols=71  Identities=20%  Similarity=0.230  Sum_probs=52.9

Q ss_pred             eeceEEee-cCCceeceEEEeeCCCCceEEEecCCceeeeecCCceEEEEEecCCCCCccceeeeeccceEEec
Q psy10559        163 VRGRVVTS-MGMGLVGVRVSTSTPLEGFTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNEVVIID  235 (418)
Q Consensus       163 i~G~v~~~-~Gtp~~Gv~vs~~~~~~G~t~t~~dg~fdl~vNGG~~~~l~f~r~Pf~~~~~~V~vpwn~~~~id  235 (418)
                      |+|.|.+. .|.|+.|+.|...... -.+.+..+|.|-+.+.- +.-++.+....|.+....|-+..++...+|
T Consensus         2 I~G~V~d~~tg~pi~~a~V~v~~~~-~~~~Td~~G~f~~~l~~-G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~   73 (79)
T d1h8la1           2 IWGFVLDATDGRGILNATISVADIN-HPVTTYKDGDYWRLLVQ-GTYKVTASARGYDPVTKTVEVDSKGGVQVN   73 (79)
T ss_dssp             EEEEEEETTTCSBCTTCEEEETTEE-EEEECCTTSEEEECCCS-EEEEEEEECTTBCCEEEEEEECSSCEEECC
T ss_pred             cEEEEEECCCCCCcCCeEEEEeCcc-ccEEecCCCCEEEEeec-ccEEEEEEEEEeccEEEEEEECCCCeEEEE
Confidence            57899975 6999999999875322 23457888988654444 456677888889998888988888876554

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.08  E-value=0.19  Score=32.59  Aligned_cols=23  Identities=22%  Similarity=0.314  Sum_probs=18.7

Q ss_pred             CCCCCCCccccCCCCCCceeecCCCCcc
Q psy10559        103 HICRSSQLCVSAPKPIDILLRKQPPAIT  130 (418)
Q Consensus       103 ~~C~~~~~C~~~~~~~~~~~C~C~~G~~  130 (418)
                      +.|.  ..|++.++   +|.|.|++||.
T Consensus         8 ~~C~--~~C~n~~G---sy~C~C~~Gy~   30 (41)
T d1i0ua2           8 DTCS--QLCVNLEG---GYKCQCEEGFQ   30 (41)
T ss_dssp             TSCS--SCEECSSS---CCEECCCTTEE
T ss_pred             CCCC--CEeECCCC---CEEeECCCCCe
Confidence            3463  47999888   89999999995

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.86  E-value=0.11  Score=35.96  Aligned_cols=39  Identities=31%  Similarity=0.655  Sum_probs=22.8

Q ss_pred             CCCCCcEEec------ceE-eeCCCCcCCCCCc--CCC-CCCCCCCcEE
Q psy10559         13 WCNEHGQCKN------GTC-LCVTGWNGKHCTL--EGC-PNSCSNHGQC   51 (418)
Q Consensus        13 pC~n~G~C~~------g~C-~C~~G~~G~~Ce~--~~C-~~~C~~~G~C   51 (418)
                      +|.+++.|..      +.| .|.+||+|.+|+.  +.. .++....+.|
T Consensus         2 pC~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~P~~~~g~C   50 (55)
T d1kloa1           2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPV   50 (55)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSC
T ss_pred             cCcCCCccceeCCCCCEEcCCCCCCCccCcccccCCccccCcccCCCcC
Confidence            4666776641      356 4888888888873  333 3344444444

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.21  E-value=0.13  Score=33.43  Aligned_cols=26  Identities=31%  Similarity=0.577  Sum_probs=20.5

Q ss_pred             cccCCC--cCCCCCcEEec----ceEeeCCCCcC
Q psy10559          6 NIDVDL--LWCNEHGQCKN----GTCLCVTGWNG   33 (418)
Q Consensus         6 ~id~C~--~pC~n~G~C~~----g~C~C~~G~~G   33 (418)
                      ++|||.  .+|+  ..|+|    +.|.|++||..
T Consensus         1 DidEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           1 DIDECENGGFCS--GVCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             ECCHHHHCSSCS--SEEEECSSSEEEEECSSSSC
T ss_pred             CccccCCCcCcc--CEeeCCCCCeEeECCCCCee
Confidence            578885  3774  68987    79999999974

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.17  E-value=0.24  Score=33.71  Aligned_cols=25  Identities=12%  Similarity=0.075  Sum_probs=20.2

Q ss_pred             CCCCCCccccCCCCCCceeecCCCCccc
Q psy10559        104 ICRSSQLCVSAPKPIDILLRKQPPAITA  131 (418)
Q Consensus       104 ~C~~~~~C~~~~~~~~~~~C~C~~G~~g  131 (418)
                      .|.-...|+|.++   +|.|.|++||+.
T Consensus        19 ~~~c~~~C~Nt~G---sY~C~C~~Gy~l   43 (53)
T d1apqa_          19 QPQCQHLCHNYVG---GYFCSCRPGYEL   43 (53)
T ss_dssp             SCTTSSEEEEETT---EEEEECSTTCEE
T ss_pred             CCCccCEeEcCCC---CeEeECCCCCeE
Confidence            3444568999999   999999999963

>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase M C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.19  E-value=1.1  Score=34.18  Aligned_cols=67  Identities=24%  Similarity=0.220  Sum_probs=50.4

Q ss_pred             eeceEEeecCCceeceEEEeeCCCCc-eEEEecCCceeeeecCCceEEEEEecCCCCCccceeeeeccc
Q psy10559        163 VRGRVVTSMGMGLVGVRVSTSTPLEG-FTLTRDDGWFDLLVNGGGAVTLQFGRSPFKPHNHIVHVPWNE  230 (418)
Q Consensus       163 i~G~v~~~~Gtp~~Gv~vs~~~~~~G-~t~t~~dg~fdl~vNGG~~~~l~f~r~Pf~~~~~~V~vpwn~  230 (418)
                      |+|.|.+..|.|+.|+.|.......+ .+-+..+|.|-+.+..| .-++.+....|+++...|.+.-++
T Consensus         2 I~G~V~D~~g~pi~~A~V~i~~~~~~~~~~td~~G~f~~~~~~g-~Y~l~vs~~Gy~~~~~~v~v~~~~   69 (107)
T d1uwya1           2 VKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPG-SYIINVTVPGHDPHITKVIIPEKS   69 (107)
T ss_dssp             EEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEECCCSE-EEEEEEECSSSCCEEEEEEECSSC
T ss_pred             cEEEEECCCCCCcCcEEEEEEcccccceeecchhheeeeecCCc-cEEEEEEEEEeeeEEEEEEECCCC
Confidence            68999999999999999988743333 23466688886655554 578888989999988877765543

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.79  E-value=0.34  Score=31.51  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=18.3

Q ss_pred             CCCCCcEEecCCCCCceEEcCCCCC
Q psy10559         44 SCSNHGQCRVNSDSQWECKCSDGWD   68 (418)
Q Consensus        44 ~C~~~G~C~~~~~g~~~C~C~~G~~   68 (418)
                      .|+  ..| ++..|+|+|.|+.||.
T Consensus        10 ~C~--~~C-~n~~Gsy~C~C~~Gy~   31 (42)
T d1nzia2          10 PCS--HFC-NNFIGGYFCSCPPEYF   31 (42)
T ss_dssp             CSS--SEE-EEETTEEEEECCTTCE
T ss_pred             CCC--CEe-ecCCCCEEEeCCCCCE
Confidence            464  478 7889999999999985