Psyllid ID: psy10571


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MIFEREDHRIVGRFESRLCDGFNNVLGLDFWNECVPMDDDWFVGSSQDGEEEEEDDVSTSGDDEDEAAGSEDMKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHcHHHccccccccHHHHHHcccccEEEcccHHHHHHHHHHcHHHHHHHHcccEEEccccccccccccccHHHHHHHHHHEEEEccccccHHHHHHHHHccccccccEEEccccccccccccccccccccccccEEEEEEcc
ccccccccEEEcccHHHHccccccccccccccccccccHHcccccHHcccccccccccccccccccHcccccccHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHcccEEEccccHHHHHHHHHHccHHHHHHHHHHHHHccccccEEcccccccHHHHHcccHEEEEEcccccccHHHHccEEEEcccccEEEccHHHcccccccccccccccccEEEEEEEEEc
miferedhrivgrfesrlcdgfnnvlgldfwnecvpmdddwfvgssqdgeeeeeddvstsgddedeaagsedmklqlegkpsvdkvtsakeTEAGAEISALVNYVQPIHFISfenaekknrhyemssfDEKQATILlkerpiefvnynkhqlsrvypagtrfdssnfmpqVFWNAGCQLVALNYQTMDLAMQLNMGIFEynqrcgyllkpefmrrqdrrfdpfaestynnvlpilvpsif
miferedhrivgrfesrlcDGFNNVLGLDFWNECVPMDDDWFVGSSQDGEeeeeddvstsgddedeaagsedmklqlegkpsvDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRfdpfaestynnvlpilvpsif
MIFEREDHRIVGRFESRLCDGFNNVLGLDFWNECVPMDDDWFVgssqdgeeeeeddvstsgddedeaagsedMKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
********RIVGRFESRLCDGFNNVLGLDFWNECVPMDDDWFV*****************************************************EISALVNYVQPIHFISFENA**************KQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILV****
MI***********************************************************************************************ISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
MIFEREDHRIVGRFESRLCDGFNNVLGLDFWNECVPMDDDWFVGS**************************DMKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
*I***EDHRIVGRFESRLC**FNNVLGLDFWNECVP*******************************************************TEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIFEREDHRIVGRFESRLCDGFNNVLGLDFWNECVPMDDDWFVGSSQDGEEEEEDDVSTSGDDEDEAAGSEDMKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILVPSIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query240 2.2.26 [Sep-21-2011]
P25455 1318 1-phosphatidylinositol 4, yes N/A 0.595 0.108 0.888 1e-73
Q01970 1234 1-phosphatidylinositol 4, yes N/A 0.637 0.123 0.607 2e-53
P51432 1234 1-phosphatidylinositol 4, yes N/A 0.637 0.123 0.614 3e-53
Q99JE6 1234 1-phosphatidylinositol 4, yes N/A 0.637 0.123 0.607 7e-53
Q9NQ66 1216 1-phosphatidylinositol 4, no N/A 0.637 0.125 0.594 1e-51
P10687 1216 1-phosphatidylinositol 4, no N/A 0.637 0.125 0.588 1e-51
P10894 1216 1-phosphatidylinositol 4, no N/A 0.637 0.125 0.594 2e-51
Q9Z1B3 1216 1-phosphatidylinositol 4, no N/A 0.637 0.125 0.588 4e-51
Q15147 1175 1-phosphatidylinositol 4, no N/A 0.562 0.114 0.629 1e-48
Q9QW07 1175 1-phosphatidylinositol 4, no N/A 0.562 0.114 0.629 1e-48
>sp|P25455|PIP1_DROME 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase classes I and II OS=Drosophila melanogaster GN=Plc21C PE=2 SV=3 Back     alignment and function desciption
 Score =  276 bits (705), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 127/143 (88%), Positives = 134/143 (93%)

Query: 90  KETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNK 149
           KETEAGAEISALVNYVQPIHF SFENAEKKNR YEMSSFDEKQAT LLKERPIEFVNYNK
Sbjct: 591 KETEAGAEISALVNYVQPIHFSSFENAEKKNRCYEMSSFDEKQATTLLKERPIEFVNYNK 650

Query: 150 HQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLK 209
           HQLSRVYPAGTRFDSSNFMPQ+FWNAGCQLVALN+QT+DLAMQLN+GIFEYN R GYLLK
Sbjct: 651 HQLSRVYPAGTRFDSSNFMPQLFWNAGCQLVALNFQTLDLAMQLNLGIFEYNARSGYLLK 710

Query: 210 PEFMRRQDRRFDPFAESTYNNVL 232
           PEFMRR DRR DPFAEST + ++
Sbjct: 711 PEFMRRSDRRLDPFAESTVDGII 733




The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1
>sp|Q01970|PLCB3_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2 Back     alignment and function description
>sp|P51432|PLCB3_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Mus musculus GN=Plcb3 PE=2 SV=2 Back     alignment and function description
>sp|Q99JE6|PLCB3_RAT 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus GN=Plcb3 PE=1 SV=2 Back     alignment and function description
>sp|Q9NQ66|PLCB1_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Homo sapiens GN=PLCB1 PE=1 SV=1 Back     alignment and function description
>sp|P10687|PLCB1_RAT 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus GN=Plcb1 PE=1 SV=1 Back     alignment and function description
>sp|P10894|PLCB1_BOVIN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Bos taurus GN=PLCB1 PE=1 SV=1 Back     alignment and function description
>sp|Q9Z1B3|PLCB1_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Mus musculus GN=Plcb1 PE=1 SV=2 Back     alignment and function description
>sp|Q15147|PLCB4_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Homo sapiens GN=PLCB4 PE=1 SV=3 Back     alignment and function description
>sp|Q9QW07|PLCB4_RAT 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus GN=Plcb4 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
383865929 1265 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.675 0.128 0.853 6e-78
307204257 1261 1-phosphatidylinositol-4,5-bisphosphate 0.691 0.131 0.820 3e-77
328787711 1269 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.675 0.127 0.835 6e-76
328787709 1253 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.675 0.129 0.835 7e-76
380011887 1265 PREDICTED: LOW QUALITY PROTEIN: 1-phosph 0.675 0.128 0.835 7e-76
340728337 1263 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.633 0.120 0.869 3e-75
350403248 1263 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.633 0.120 0.869 3e-75
340728339 1248 PREDICTED: 1-phosphatidylinositol-4,5-bi 0.633 0.121 0.869 3e-75
157125186 774 phospholipase c [Aedes aegypti] gi|10887 0.641 0.198 0.831 6e-75
307171492 1266 1-phosphatidylinositol-4,5-bisphosphate 0.670 0.127 0.819 6e-75
>gi|383865929|ref|XP_003708424.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 140/164 (85%), Positives = 154/164 (93%), Gaps = 2/164 (1%)

Query: 71  EDMKLQLEGK-PSVDKV-TSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSF 128
           ED+KL++E K P+ DKV +SAKETEAGAEISALVNYVQP+HF SFE+AEKKNR YEMSSF
Sbjct: 570 EDIKLRMEDKVPAPDKVASSAKETEAGAEISALVNYVQPVHFNSFESAEKKNRMYEMSSF 629

Query: 129 DEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMD 188
           DEKQAT LLKERP+EFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQT+D
Sbjct: 630 DEKQATTLLKERPLEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTLD 689

Query: 189 LAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVL 232
           LAMQLN+GIFEYNQRCGYLLKPEFMRR+DRR DPFAEST + ++
Sbjct: 690 LAMQLNLGIFEYNQRCGYLLKPEFMRRKDRRLDPFAESTVDGII 733




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204257|gb|EFN83054.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328787711|ref|XP_003250991.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|328787709|ref|XP_003250990.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|380011887|ref|XP_003690025.1| PREDICTED: LOW QUALITY PROTEIN: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II-like [Apis florea] Back     alignment and taxonomy information
>gi|340728337|ref|XP_003402482.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350403248|ref|XP_003486742.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340728339|ref|XP_003402483.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|157125186|ref|XP_001660637.1| phospholipase c [Aedes aegypti] gi|108873715|gb|EAT37940.1| AAEL010124-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|307171492|gb|EFN63333.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
FB|FBgn0004611 1318 Plc21C "Phospholipase C at 21C 0.629 0.114 0.843 3.4e-65
UNIPROTKB|E2R9U6 919 PLCB3 "Uncharacterized protein 0.637 0.166 0.607 9.6e-48
UNIPROTKB|F1RQ08 1227 PLCB3 "Uncharacterized protein 0.637 0.124 0.607 1.4e-47
UNIPROTKB|Q01970 1234 PLCB3 "1-phosphatidylinositol 0.637 0.123 0.607 1.4e-47
MGI|MGI:104778 1234 Plcb3 "phospholipase C, beta 3 0.637 0.123 0.614 1.8e-47
UNIPROTKB|J9JHK9 1230 PLCB3 "Uncharacterized protein 0.637 0.124 0.607 2.3e-47
RGD|61993 1234 Plcb3 "phospholipase C, beta 3 0.637 0.123 0.607 3.7e-47
UNIPROTKB|Q99JE6 1234 Plcb3 "1-phosphatidylinositol 0.637 0.123 0.607 3.7e-47
UNIPROTKB|E1BHX7 1234 PLCB3 "Uncharacterized protein 0.637 0.123 0.601 4.8e-47
UNIPROTKB|H0YCJ2 914 PLCB1 "1-phosphatidylinositol 0.637 0.167 0.594 6.9e-47
FB|FBgn0004611 Plc21C "Phospholipase C at 21C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 674 (242.3 bits), Expect = 3.4e-65, P = 3.4e-65
 Identities = 129/153 (84%), Positives = 139/153 (90%)

Query:    80 KPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKE 139
             +P  +K  + KETEAGAEISALVNYVQPIHF SFENAEKKNR YEMSSFDEKQAT LLKE
Sbjct:   583 EPPPEK--AQKETEAGAEISALVNYVQPIHFSSFENAEKKNRCYEMSSFDEKQATTLLKE 640

Query:   140 RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFE 199
             RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQ+FWNAGCQLVALN+QT+DLAMQLN+GIFE
Sbjct:   641 RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQLFWNAGCQLVALNFQTLDLAMQLNLGIFE 700

Query:   200 YNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVL 232
             YN R GYLLKPEFMRR DRR DPFAEST + ++
Sbjct:   701 YNARSGYLLKPEFMRRSDRRLDPFAESTVDGII 733




GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=ISS;NAS
GO:0006661 "phosphatidylinositol biosynthetic process" evidence=NAS
GO:0006651 "diacylglycerol biosynthetic process" evidence=NAS
GO:0005509 "calcium ion binding" evidence=IEA
GO:0016042 "lipid catabolic process" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0007629 "flight behavior" evidence=IGI
UNIPROTKB|E2R9U6 PLCB3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQ08 PLCB3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q01970 PLCB3 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:104778 Plcb3 "phospholipase C, beta 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9JHK9 PLCB3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|61993 Plcb3 "phospholipase C, beta 3 (phosphatidylinositol-specific)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q99JE6 Plcb3 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BHX7 PLCB3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|H0YCJ2 PLCB1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q01970PLCB3_HUMAN3, ., 1, ., 4, ., 1, 10.60780.63750.1239yesN/A
P51432PLCB3_MOUSE3, ., 1, ., 4, ., 1, 10.61430.63750.1239yesN/A
Q99JE6PLCB3_RAT3, ., 1, ., 4, ., 1, 10.60780.63750.1239yesN/A
P25455PIP1_DROME3, ., 1, ., 4, ., 1, 10.88810.59580.1084yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.4.11LOW CONFIDENCE prediction!
3rd Layer3.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
cd08591257 cd08591, PI-PLCc_beta, Catalytic domain of metazoa 7e-71
pfam00387117 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific 2e-70
smart00149115 smart00149, PLCYc, Phospholipase C, catalytic doma 1e-68
cd08626257 cd08626, PI-PLCc_beta4, Catalytic domain of metazo 1e-54
cd08625258 cd08625, PI-PLCc_beta3, Catalytic domain of metazo 2e-50
cd08624261 cd08624, PI-PLCc_beta2, Catalytic domain of metazo 2e-49
cd08558226 cd08558, PI-PLCc_eukaryota, Catalytic domain of eu 6e-49
cd08623258 cd08623, PI-PLCc_beta1, Catalytic domain of metazo 6e-47
cd08593257 cd08593, PI-PLCc_delta, Catalytic domain of metazo 4e-44
cd08631258 cd08631, PI-PLCc_delta4, Catalytic domain of metaz 1e-33
cd08597260 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of 4e-33
cd08592229 cd08592, PI-PLCc_gamma, Catalytic domain of metazo 3e-31
cd08594227 cd08594, PI-PLCc_eta, Catalytic domain of metazoan 1e-29
cd08629258 cd08629, PI-PLCc_delta1, Catalytic domain of metaz 6e-29
cd08595257 cd08595, PI-PLCc_zeta, Catalytic domain of metazoa 7e-29
cd08630258 cd08630, PI-PLCc_delta3, Catalytic domain of metaz 1e-27
cd08596254 cd08596, PI-PLCc_epsilon, Catalytic domain of meta 1e-26
cd08598231 cd08598, PI-PLC1c_yeast, Catalytic domain of putat 7e-26
cd08633254 cd08633, PI-PLCc_eta2, Catalytic domain of metazoa 1e-25
cd08628254 cd08628, PI-PLCc_gamma2, Catalytic domain of metaz 2e-22
cd08632253 cd08632, PI-PLCc_eta1, Catalytic domain of metazoa 3e-22
cd00137274 cd00137, PI-PLCc, Catalytic domain of prokaryotic 2e-20
cd08627229 cd08627, PI-PLCc_gamma1, Catalytic domain of metaz 1e-18
PLN02228 567 PLN02228, PLN02228, Phosphoinositide phospholipase 5e-17
cd08599228 cd08599, PI-PLCc_plant, Catalytic domain of plant 2e-15
PLN02222 581 PLN02222, PLN02222, phosphoinositide phospholipase 5e-15
PLN02952 599 PLN02952, PLN02952, phosphoinositide phospholipase 7e-15
PLN02230 598 PLN02230, PLN02230, phosphoinositide phospholipase 9e-15
PLN02223 537 PLN02223, PLN02223, phosphoinositide phospholipase 5e-04
>gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta Back     alignment and domain information
 Score =  217 bits (554), Expect = 7e-71
 Identities = 73/104 (70%), Positives = 87/104 (83%)

Query: 98  ISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYP 157
           +S+LVNY+QP+ F  FE AEK+N+HYEMSSF+E +    LK+ PIEFVNYNK QLSR+YP
Sbjct: 154 LSSLVNYIQPVKFQGFEVAEKRNKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYP 213

Query: 158 AGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYN 201
            GTR DSSN+MPQ+FWNAGCQ+VALN+QT DL MQLN G FEYN
Sbjct: 214 KGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN 257


This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257

>gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain Back     alignment and domain information
>gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y Back     alignment and domain information
>gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 Back     alignment and domain information
>gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 Back     alignment and domain information
>gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 Back     alignment and domain information
>gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins Back     alignment and domain information
>gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 Back     alignment and domain information
>gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta Back     alignment and domain information
>gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 Back     alignment and domain information
>gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein Back     alignment and domain information
>gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma Back     alignment and domain information
>gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta Back     alignment and domain information
>gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 Back     alignment and domain information
>gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta Back     alignment and domain information
>gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 Back     alignment and domain information
>gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon Back     alignment and domain information
>gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 Back     alignment and domain information
>gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 Back     alignment and domain information
>gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 Back     alignment and domain information
>gnl|CDD|176497 cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C Back     alignment and domain information
>gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 Back     alignment and domain information
>gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C Back     alignment and domain information
>gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2 Back     alignment and domain information
>gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C Back     alignment and domain information
>gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4 Back     alignment and domain information
>gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 240
PF00387118 PI-PLC-Y: Phosphatidylinositol-specific phospholip 100.0
KOG1265|consensus 1189 100.0
smart00149115 PLCYc Phospholipase C, catalytic domain (part); do 100.0
PLN02230 598 phosphoinositide phospholipase C 4 100.0
KOG0169|consensus 746 100.0
KOG1264|consensus 1267 100.0
PLN02222 581 phosphoinositide phospholipase C 2 100.0
PLN02228 567 Phosphoinositide phospholipase C 100.0
PLN02952 599 phosphoinositide phospholipase C 100.0
cd08625258 PI-PLCc_beta3 Catalytic domain of metazoan phospho 100.0
cd08630258 PI-PLCc_delta3 Catalytic domain of metazoan phosph 100.0
cd08597260 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan 100.0
cd08629258 PI-PLCc_delta1 Catalytic domain of metazoan phosph 100.0
cd08631258 PI-PLCc_delta4 Catalytic domain of metazoan phosph 100.0
cd08624261 PI-PLCc_beta2 Catalytic domain of metazoan phospho 100.0
cd08595257 PI-PLCc_zeta Catalytic domain of metazoan phosphoi 100.0
cd08593257 PI-PLCc_delta Catalytic domain of metazoan phospho 100.0
cd08623258 PI-PLCc_beta1 Catalytic domain of metazoan phospho 100.0
cd08628254 PI-PLCc_gamma2 Catalytic domain of metazoan phosph 100.0
cd08596254 PI-PLCc_epsilon Catalytic domain of metazoan phosp 100.0
cd08633254 PI-PLCc_eta2 Catalytic domain of metazoan phosphoi 100.0
PLN02223 537 phosphoinositide phospholipase C 100.0
cd08626257 PI-PLCc_beta4 Catalytic domain of metazoan phospho 100.0
cd08632253 PI-PLCc_eta1 Catalytic domain of metazoan phosphoi 100.0
cd08591257 PI-PLCc_beta Catalytic domain of metazoan phosphoi 100.0
cd08592229 PI-PLCc_gamma Catalytic domain of metazoan phospho 99.97
cd08594227 PI-PLCc_eta Catalytic domain of metazoan phosphoin 99.97
cd08558226 PI-PLCc_eukaryota Catalytic domain of eukaryotic p 99.97
cd08599228 PI-PLCc_plant Catalytic domain of plant phosphatid 99.97
cd08598231 PI-PLC1c_yeast Catalytic domain of putative yeast 99.97
cd08627229 PI-PLCc_gamma1 Catalytic domain of metazoan phosph 99.97
cd00137274 PI-PLCc Catalytic domain of prokaryotic and eukary 99.82
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3 Back     alignment and domain information
Probab=100.00  E-value=1.6e-54  Score=350.95  Aligned_cols=118  Identities=57%  Similarity=0.978  Sum_probs=97.2

Q ss_pred             HhhcceeecccccCCCccchhccCCcceeccccHHHHHHHHHhCCchhhhccccceeeeecCCcccCCCCCChhHHhhhc
Q psy10571         97 EISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAG  176 (240)
Q Consensus        97 ELSdLVvY~rsV~F~~f~~~~~~~~~~~msSfsE~ka~kl~k~~~~~fv~~n~~~LsRVYP~g~RvdSSNynP~~~Wn~G  176 (240)
                      ||||||+||++|+|++|........+++|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++|
T Consensus         1 ELSdLvvY~~s~~f~~~~~~~~~~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~G   80 (118)
T PF00387_consen    1 ELSDLVVYCRSVKFKSFEDSERKKQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNCG   80 (118)
T ss_dssp             HHHTTESSCEEE----HHHHHHHTSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTTT
T ss_pred             ChhhhheeeccccCCCcCChhhcCCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhcc
Confidence            89999999999999999997777669999999999999999999999999999999999999999999999999999999


Q ss_pred             cceecccCcCCCcchhcccccccccCCeeeEecCcccc
Q psy10571        177 CQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMR  214 (240)
Q Consensus       177 cQmVALN~QT~D~~MqLN~g~F~~NG~CGYVLKP~~LR  214 (240)
                      ||||||||||+|++|+||+|||+.||+|||||||++||
T Consensus        81 ~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR  118 (118)
T PF00387_consen   81 CQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR  118 (118)
T ss_dssp             -SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred             CccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence            99999999999999999999999999999999999998



1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>KOG1265|consensus Back     alignment and domain information
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y Back     alignment and domain information
>PLN02230 phosphoinositide phospholipase C 4 Back     alignment and domain information
>KOG0169|consensus Back     alignment and domain information
>KOG1264|consensus Back     alignment and domain information
>PLN02222 phosphoinositide phospholipase C 2 Back     alignment and domain information
>PLN02228 Phosphoinositide phospholipase C Back     alignment and domain information
>PLN02952 phosphoinositide phospholipase C Back     alignment and domain information
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 Back     alignment and domain information
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 Back     alignment and domain information
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein Back     alignment and domain information
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 Back     alignment and domain information
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 Back     alignment and domain information
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 Back     alignment and domain information
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta Back     alignment and domain information
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta Back     alignment and domain information
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 Back     alignment and domain information
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 Back     alignment and domain information
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon Back     alignment and domain information
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 Back     alignment and domain information
>PLN02223 phosphoinositide phospholipase C Back     alignment and domain information
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 Back     alignment and domain information
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 Back     alignment and domain information
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta Back     alignment and domain information
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma Back     alignment and domain information
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta Back     alignment and domain information
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins Back     alignment and domain information
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 Back     alignment and domain information
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
4gnk_B 1235 Crystal Structure Of Galphaq In Complex With Full-l 2e-54
3ohm_B 885 Crystal Structure Of Activated G Alpha Q Bound To I 4e-54
3qr1_A 813 Crystal Structure Of L. Pealei Plc21 Length = 813 9e-52
3qr0_A 816 Crystal Structure Of S. Officinalis Plc21 Length = 9e-52
2fju_B 799 Activated Rac1 Bound To Its Effector Phospholipase 3e-47
1djg_A 624 Phosphoinositide-Specific Phospholipase C-Delta1 Fr 2e-26
1qas_A 622 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies 2e-26
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 Back     alignment and structure

Iteration: 1

Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 93/153 (60%), Positives = 118/153 (77%) Query: 80 KPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKE 139 KP+ D+ T++ E A E+S LVNY++P+ F SFE A K+N+ +EMSSF E +A L + Sbjct: 573 KPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTK 632 Query: 140 RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFE 199 P+EFV YNK QLSR+YP GTR DSSN+MPQ+FWN GCQLVALN+QT+D+AMQLN G+FE Sbjct: 633 SPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFE 692 Query: 200 YNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVL 232 YN R GYLLKPEFMRR D+ FDPF E + ++ Sbjct: 693 YNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIV 725
>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 Back     alignment and structure
>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813 Back     alignment and structure
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 Back     alignment and structure
>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799 Back     alignment and structure
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624 Back     alignment and structure
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
3ohm_B 885 1-phosphatidylinositol-4,5-bisphosphate phosphodi 9e-49
3qr0_A 816 Phospholipase C-beta (PLC-beta); PH domain, EF han 9e-47
2zkm_X 799 1-phosphatidylinositol-4,5-bisphosphate phosphodie 3e-45
1djx_A 624 PLC-D1, phosphoinositide-specific phospholipase C, 1e-44
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 Back     alignment and structure
 Score =  170 bits (431), Expect = 9e-49
 Identities = 101/204 (49%), Positives = 129/204 (63%)

Query: 30  FWNECVPMDDDWFVGSSQDGEEEEEDDVSTSGDDEDEAAGSEDMKLQLEGKPSVDKVTSA 89
                +         S  D        V    D EDE    E+ +     KP+ D+ T++
Sbjct: 521 GEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEEEDEEEEEQTDPKKPTTDEGTAS 580

Query: 90  KETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNK 149
            E  A  E+S LVNY++P+ F SFE A K+N+ +EMSSF E +A   L + P+EFV YNK
Sbjct: 581 SEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNK 640

Query: 150 HQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLK 209
            QLSR+YP GTR DSSN+MPQ+FWN GCQLVALN+QT+D+AMQLN G+FEYN R GYLLK
Sbjct: 641 QQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLK 700

Query: 210 PEFMRRQDRRFDPFAESTYNNVLP 233
           PEFMRR D+ FDPF E   + ++ 
Sbjct: 701 PEFMRRPDKSFDPFTEVIVDGIVA 724


>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 Back     alignment and structure
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 Back     alignment and structure
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
3ohm_B 885 1-phosphatidylinositol-4,5-bisphosphate phosphodi 100.0
2zkm_X 799 1-phosphatidylinositol-4,5-bisphosphate phosphodie 100.0
3qr0_A 816 Phospholipase C-beta (PLC-beta); PH domain, EF han 100.0
1djx_A 624 PLC-D1, phosphoinositide-specific phospholipase C, 100.0
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.7e-54  Score=438.23  Aligned_cols=153  Identities=59%  Similarity=1.027  Sum_probs=144.4

Q ss_pred             ccccchhhhhHHHHhhcceeecccccCCCccchhccCCcceeccccHHHHHHHHHhCCchhhhccccceeeeecCCcccC
Q psy10571         84 DKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFD  163 (240)
Q Consensus        84 ~~~~~~k~~kla~ELSdLVvY~rsV~F~~f~~~~~~~~~~~msSfsE~ka~kl~k~~~~~fv~~n~~~LsRVYP~g~Rvd  163 (240)
                      ++.+++++.++++|||+||+||++|+|++|+.+.....+|+|+||+|++|.+++++++.+|++||++||+||||+|+|++
T Consensus       575 ~~~~~~~~~~i~~eLS~LvvY~~~vkf~~f~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~Rid  654 (885)
T 3ohm_B          575 DEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVD  654 (885)
T ss_dssp             TTGGGTTCCCCCHHHHTTCSSCEECCCCCHHHHHHHTCTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTT
T ss_pred             ccccccccchhhHHHHhHHhhhcCccCCCcccccccCCcceECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccC
Confidence            34445667899999999999999999999999888888999999999999999999999999999999999999999999


Q ss_pred             CCCCChhHHhhhccceecccCcCCCcchhcccccccccCCeeeEecCccccCCCCCcCCCCCCccCccccccc
Q psy10571        164 SSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVLPILV  236 (240)
Q Consensus       164 SSNynP~~~Wn~GcQmVALN~QT~D~~MqLN~g~F~~NG~CGYVLKP~~LR~~~~~FdP~~~~~v~gv~p~~~  236 (240)
                      ||||||++||++|||||||||||+|++||||+|||+.||+|||||||++||+.+..|||+...+++|+.|.+|
T Consensus       655 SSNy~P~~~W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L  727 (885)
T 3ohm_B          655 SSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANAL  727 (885)
T ss_dssp             CCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCGGGTCTTCCCCTTCSSCCTTCCCEEE
T ss_pred             CCCCCchhhcccCceeeeecCCCCCcccchhhhhhccCCceeeeecCHHHcCCCcCcCCCcCcccCcccceEE
Confidence            9999999999999999999999999999999999999999999999999999888999999989999887654



>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Back     alignment and structure
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Back     alignment and structure
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 240
d2zkmx4349 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human 8e-64
d1qasa3327 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P 8e-62
>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  200 bits (509), Expect = 8e-64
 Identities = 86/171 (50%), Positives = 117/171 (68%)

Query: 45  SSQDGEEEEEDDVSTSGDDEDEAAGSEDMKLQLEGKPSVDKVTSAKETEAGAEISALVNY 104
           +      EE  ++     +E+E   S ++  +   K   D+ T+  E  A  E+S+LVNY
Sbjct: 178 APAVWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNY 237

Query: 105 VQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDS 164
           +QP  F+SFE + +KNR Y +SSF E +A  LL +  ++FV+YNK Q+SR+YP GTR DS
Sbjct: 238 IQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDS 297

Query: 165 SNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRR 215
           SN+MPQ+FWNAGCQ+VALN+QTMDL MQ NM +FE+N + GYLLK EFMRR
Sbjct: 298 SNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348


>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
d1qasa3327 Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n 100.0
d2zkmx4349 Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI 100.0
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C isozyme D1 (PLC-D1)
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00  E-value=1.2e-47  Score=347.68  Aligned_cols=140  Identities=41%  Similarity=0.688  Sum_probs=126.7

Q ss_pred             ccchhhhhHHHHhhcceeecccccCCCccchhc-cCCcceeccccHHHHHHHHHhCCchhhhccccceeeeecCCcccCC
Q psy10571         86 VTSAKETEAGAEISALVNYVQPIHFISFENAEK-KNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYPAGTRFDS  164 (240)
Q Consensus        86 ~~~~k~~kla~ELSdLVvY~rsV~F~~f~~~~~-~~~~~~msSfsE~ka~kl~k~~~~~fv~~n~~~LsRVYP~g~RvdS  164 (240)
                      ...+++.++++|||+||+|+++++|.+|..... ...+++|+||+|+++.+++++++.+|++||+++|+||||+|+|++|
T Consensus       182 ~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~l~~~~~~~l~~~nk~~l~rvyP~g~ridS  261 (327)
T d1qasa3         182 KPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDS  261 (327)
T ss_dssp             -------CCCHHHHTTCSSEEECCCCCCCTTSSCSCCTTEEEEEEHHHHHHHHHHHTHHHHHHHHHSCEEEECCTTCTTC
T ss_pred             ccchhhhHhhHHHHhHHHHhcCccCCCccchhhcCCcceeeeecCHHHHHHHHHHhhHHHHHHHHhheEEEecCCCCCCC
Confidence            344667789999999999999999999987643 3457899999999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccceecccCcCCCcchhcccccccccCCeeeEecCccccCCCCCcCCCCC
Q psy10571        165 SNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFAE  225 (240)
Q Consensus       165 SNynP~~~Wn~GcQmVALN~QT~D~~MqLN~g~F~~NG~CGYVLKP~~LR~~~~~FdP~~~  225 (240)
                      |||||+.+|++|||||||||||.|.+|++|.|+|+.||+|||||||++||+++.+|||...
T Consensus       262 sNy~P~~~w~~G~Q~valN~Qt~D~~m~ln~~~F~~NG~~GyVLKP~~Lr~~~~~f~p~~~  322 (327)
T d1qasa3         262 SNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRAL  322 (327)
T ss_dssp             CCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHTTSGGGCSEEECCGGGSCTTCCCCTTSC
T ss_pred             CCCChHHHHhcCCcEEEEeccCCChhHHHHHHHHHhcCCcceEECCHHHcCCCCCcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999754



>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure