Psyllid ID: psy10611

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVMQ
Secondary Structure (PSIPRED)
ccccccEEEccEEEEEEcccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccEEEccccccccccccccccccccccccccccccEEEEEccEEEEEEcccccccccccEEcccccc
Secondary Structure Prediction (SSPRO)
cHHHcccccccEEEEEEEccHHHHHHHHHcccEEcEEEEEcccHHHHHHHHHHccccEEEEccccccccccccEccEEccEEccHHHcccccEEEEEEEEEEEEEccccccccccccEEccccc
Coil and Loop (DISEMBL)
mkcykeeifgpvLVCLTVDTLDEAISIinknpygngtaiftnngatarkfsqeidcgqvginvpipvplsmfsftgsrgsflgenhfygkqgfyfyTETKTVTQLWRESDVTHSKAAVSMPVMQ
Flexible Loop (DISEMBL)
mkcykeeifgpVLVCLTVDTLDEAISIinknpygngTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESdvthskaavsmpvmq
Low Complexity Region (SEG)
MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVMQ
Disordered region (IsUnstruct)
**CYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE****************
Disordered Region (DISOPRED)
*KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDV**SK*AVSMPVM*
Disordered Region (DISEMBL)
MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKA********
Disordered Region (DISPRO)
MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRES***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVMQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
Q17M80	521	Probable methylmalonate-s	N/A	N/A	1.0	0.238	0.806	1e-57
Q7QC84	521	Probable methylmalonate-s	yes	N/A	1.0	0.238	0.806	2e-57
Q7KW39	520	Probable methylmalonate-s	yes	N/A	1.0	0.238	0.758	6e-55
Q29HB2	520	Probable methylmalonate-s	yes	N/A	1.0	0.238	0.75	2e-54
Q07536	537	Methylmalonate-semialdehy	yes	N/A	0.991	0.229	0.707	4e-48
Q54I10	528	Probable methylmalonate-s	yes	N/A	0.991	0.232	0.653	1e-47
Q9EQ20	535	Methylmalonate-semialdehy	yes	N/A	0.991	0.229	0.699	1e-47
Q02252	535	Methylmalonate-semialdehy	yes	N/A	0.991	0.229	0.699	1e-47
Q02253	535	Methylmalonate-semialdehy	yes	N/A	0.991	0.229	0.691	5e-47
P52713	523	Probable methylmalonate-s	yes	N/A	0.991	0.235	0.685	2e-45

>sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1

 Score =  221 bits (562), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCLTVDT+DEA+ +IN NPYGNGTAIFT NGATARKF  EID GQVG
Sbjct: 398 MKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVNEIDVGQVG 457

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSRGSF+G+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct: 458 VNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWREGDVSHTKAAVAM 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMK 521

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.
Aedes aegypti (taxid: 7159)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7

>sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2

 Score =  220 bits (561), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCL+VDT+DEAI +IN NPYGNGTAIFT NGATARKF  +ID GQVG
Sbjct: 398 MKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATARKFVNDIDVGQVG 457

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSRGSFLG+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct: 458 VNVPIPVPLPMFSFTGSRGSFLGDCHFYGKQGIKFYTQTKTVTQLWREGDVSHTKAAVAM 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMK 521

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2 SV=1

 Score =  212 bits (539), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 108/124 (87%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLV L  DTLD+AI I+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct: 397 MKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWR++DVTH++AAV+M
Sbjct: 457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRKTDVTHTQAAVAM 516

Query: 121 PVMQ 124
           P M+
Sbjct: 517 PTMK 520

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q29HB2|MMSA_DROPS Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA14712 PE=3 SV=1

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 106/124 (85%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLV L  D LD+AI I+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct: 397 MKCYTEEIFGPVLVILKADNLDDAIDIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWRE+DV H++AAV+M
Sbjct: 457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRETDVNHTQAAVAM 516

Query: 121 PVMQ 124
           P M+
Sbjct: 517 PTMK 520

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1

 Score =  189 bits (480), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/123 (70%), Positives = 97/123 (78%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CYKEEIFGPVLV L  DTLDEAI I+N NPYGNGTAIFT NGATARK+S  +D GQVG
Sbjct: 413 MTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVG 472

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D + S  AV M
Sbjct: 473 VNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSPAVVM 532

Query: 121 PVM 123
           P M
Sbjct: 533 PTM 535

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1

 Score =  188 bits (477), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 104/124 (83%), Gaps = 1/124 (0%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+CYKEEIFGPVLVCL VDT+D+AI +IN NPYGNGTA+FT++GA ARK+ +EID GQVG
Sbjct: 402 MRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQREIDVGQVG 461

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHS-KAAVS 119
           IN+PIPVPL  FSFTGSRGSF+G  HFYGK G  F+T+ KT+T  WR+ D++H   ++++
Sbjct: 462 INLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRDDDISHGVSSSMN 521

Query: 120 MPVM 123
           MP++
Sbjct: 522 MPIL 525

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 97/123 (78%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CYKEEIFGPVLV L  +TLDEAI I+N NPYGNGTAIFT NGATARK++  +D GQVG
Sbjct: 411 MTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATARKYAHMVDVGQVG 470

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct: 471 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVM 530

Query: 121 PVM 123
           P M
Sbjct: 531 PTM 533

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 97/123 (78%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CYKEEIFGPVLV L  +TLDEAI I+N NPYGNGTAIFT NGATARK++  +D GQVG
Sbjct: 411 MTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATARKYAHLVDVGQVG 470

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct: 471 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVM 530

Query: 121 PVM 123
           P M
Sbjct: 531 PTM 533

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1

 Score =  186 bits (471), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 96/123 (78%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CYKEEIFGPVLV L  +TLDEAI I+N NPYGNGTAIFT NGA ARK++  +D GQVG
Sbjct: 411 MTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGAIARKYAHMVDVGQVG 470

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct: 471 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVM 530

Query: 121 PVM 123
           P M
Sbjct: 531 PTM 533

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1

 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 1/124 (0%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CY+EEIFGPVLV +  + L+EAI IIN NPYGNGTAIFT+NGATARKF+ E+D GQ+G
Sbjct: 401 MTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKFTNEVDVGQIG 460

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           INVPIPVPL MFSFTGSRGSFLG+ +FYGK G  FYT+ KTVTQ W ES +T  K  +S 
Sbjct: 461 INVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNES-LTELKPQMSF 519

Query: 121 PVMQ 124
           P ++
Sbjct: 520 PQLK 523

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
193605836	522	PREDICTED: probable methylmalonate-semia	1.0	0.237	0.806	7e-57
157114716	521	methylmalonate-semialdehyde dehydrogenas	1.0	0.238	0.806	5e-56
312373890	379	hypothetical protein AND_16858 [Anophele	1.0	0.327	0.814	6e-56
158290905	521	AGAP002499-PA [Anopheles gambiae str. PE	1.0	0.238	0.806	7e-56
170048553	521	methylmalonate-semialdehyde dehydrogenas	1.0	0.238	0.798	1e-55
242010445	526	methylmalonate-semialdehyde dehydrogenas	1.0	0.235	0.822	2e-55
357624167	522	hypothetical protein KGM_19146 [Danaus p	1.0	0.237	0.798	1e-54
195399083	520	GJ15927 [Drosophila virilis] gi|19415057	1.0	0.238	0.782	2e-54
195448370	520	GK25041 [Drosophila willistoni] gi|19416	1.0	0.238	0.774	2e-54
195045974	520	GH24555 [Drosophila grimshawi] gi|193892	1.0	0.238	0.774	2e-54

>gi|193605836|ref|XP_001944025.1| PREDICTED: probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Acyrthosiphon pisum]

 Score =  224 bits (570), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 113/124 (91%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCLT DTLDEA++IIN NPYGNGTAIFT NGATARKF+ E+ CG VG
Sbjct: 399 MKCYTEEIFGPVLVCLTADTLDEALNIINSNPYGNGTAIFTTNGATARKFTHEVQCGNVG 458

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSFLG+NHFYGKQG++F+TE KTVTQLW+ESD T +KAAVSM
Sbjct: 459 VNVPIPVPLPMFSFTGTRGSFLGQNHFYGKQGYHFFTELKTVTQLWKESDATDTKAAVSM 518

Query: 121 PVMQ 124
           PVM+
Sbjct: 519 PVMR 522

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

>gi|157114716|ref|XP_001652386.1| methylmalonate-semialdehyde dehydrogenase [Aedes aegypti] gi|122107065|sp|Q17M80.1|MMSA_AEDAE RecName: Full=Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Short=MMSDH; Short=Malonate-semialdehyde dehydrogenase [acylating]; Flags: Precursor gi|108883539|gb|EAT47764.1| AAEL001134-PA [Aedes aegypti]

 Score =  221 bits (562), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCLTVDT+DEA+ +IN NPYGNGTAIFT NGATARKF  EID GQVG
Sbjct: 398 MKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVNEIDVGQVG 457

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSRGSF+G+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct: 458 VNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWREGDVSHTKAAVAM 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMK 521

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312373890|gb|EFR21559.1| hypothetical protein AND_16858 [Anopheles darlingi]

 Score =  221 bits (562), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 101/124 (81%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCL+VDT+DEAI +IN NPYGNGTAIFT NGATARKF  EID GQVG
Sbjct: 256 MKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATARKFVNEIDVGQVG 315

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSRGSFLG+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct: 316 VNVPIPVPLPMFSFTGSRGSFLGDCHFYGKQGIKFYTQTKTVTQLWREGDVSHTKAAVAM 375

Query: 121 PVMQ 124
           P M+
Sbjct: 376 PTMK 379

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158290905|ref|XP_312441.4| AGAP002499-PA [Anopheles gambiae str. PEST] gi|74803744|sp|Q7QC84.2|MMSA_ANOGA RecName: Full=Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Short=MMSDH; Short=Malonate-semialdehyde dehydrogenase [acylating]; Flags: Precursor gi|157018121|gb|EAA07972.4| AGAP002499-PA [Anopheles gambiae str. PEST]

 Score =  220 bits (561), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCL+VDT+DEAI +IN NPYGNGTAIFT NGATARKF  +ID GQVG
Sbjct: 398 MKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATARKFVNDIDVGQVG 457

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSRGSFLG+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct: 458 VNVPIPVPLPMFSFTGSRGSFLGDCHFYGKQGIKFYTQTKTVTQLWREGDVSHTKAAVAM 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMK 521

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048553|ref|XP_001853240.1| methylmalonate-semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167870633|gb|EDS34016.1| methylmalonate-semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus]

 Score =  219 bits (559), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 99/124 (79%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLVCLTVDTLDEAI ++N NPYGNGTAIFT NGATARKF  EID GQVG
Sbjct: 398 MKCYTEEIFGPVLVCLTVDTLDEAIELVNNNPYGNGTAIFTTNGATARKFVNEIDAGQVG 457

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G+ HFYGKQG  FYT+TKTVTQLWRE+DV+H++AAV+M
Sbjct: 458 VNVPIPVPLPMFSFTGTRGSFQGDCHFYGKQGIKFYTQTKTVTQLWRETDVSHTQAAVAM 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMK 521

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010445|ref|XP_002425978.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis] gi|212509969|gb|EEB13240.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis]

 Score =  219 bits (558), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/124 (82%), Positives = 111/124 (89%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCYKEEIFGPVLV L+VDTLDEAIS+IN NPYGNGTAIFT NGATARKF+QEID GQVG
Sbjct: 403 MKCYKEEIFGPVLVVLSVDTLDEAISLINDNPYGNGTAIFTTNGATARKFTQEIDVGQVG 462

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTGSR SF G+ HFYGKQG  FYT+TKTV QLWR+SD T +KAAV+M
Sbjct: 463 VNVPIPVPLPMFSFTGSRDSFRGDLHFYGKQGINFYTQTKTVIQLWRQSDATDAKAAVAM 522

Query: 121 PVMQ 124
           PVMQ
Sbjct: 523 PVMQ 526

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357624167|gb|EHJ75046.1| hypothetical protein KGM_19146 [Danaus plexippus]

 Score =  216 bits (550), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/124 (79%), Positives = 108/124 (87%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+CY+EEIFGPVL+CL VDTLDEAI +IN NPYGNGTAIFT NGATARKFS +ID GQVG
Sbjct: 399 MECYREEIFGPVLICLFVDTLDEAIEMINSNPYGNGTAIFTTNGATARKFSSQIDVGQVG 458

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           INVPIPVPLSMFSF+GSRGSFLG NHF GKQG  FYTE KTV   WR+SDV+H+KAAVSM
Sbjct: 459 INVPIPVPLSMFSFSGSRGSFLGTNHFCGKQGIDFYTELKTVVSFWRQSDVSHAKAAVSM 518

Query: 121 PVMQ 124
           P  Q
Sbjct: 519 PTQQ 522

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399083|ref|XP_002058150.1| GJ15927 [Drosophila virilis] gi|194150574|gb|EDW66258.1| GJ15927 [Drosophila virilis]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 97/124 (78%), Positives = 109/124 (87%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLV L  DTLDEAISI+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct: 397 MKCYTEEIFGPVLVILNADTLDEAISIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWRE+DVTH++AAV+M
Sbjct: 457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGVKFYTQTKTVTQLWRETDVTHTQAAVAM 516

Query: 121 PVMQ 124
           P M+
Sbjct: 517 PTMK 520

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195448370|ref|XP_002071628.1| GK25041 [Drosophila willistoni] gi|194167713|gb|EDW82614.1| GK25041 [Drosophila willistoni]

 Score =  216 bits (549), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 109/124 (87%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLV L  DTLD+AISI+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct: 397 MKCYTEEIFGPVLVILNADTLDDAISIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWRE+DVTH++AAV+M
Sbjct: 457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRETDVTHTQAAVAM 516

Query: 121 PVMQ 124
           P M+
Sbjct: 517 PTMK 520

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195045974|ref|XP_001992062.1| GH24555 [Drosophila grimshawi] gi|193892903|gb|EDV91769.1| GH24555 [Drosophila grimshawi]

 Score =  215 bits (548), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 109/124 (87%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MKCY EEIFGPVLV L  DTLDEAIS++N NPYGNGTAIFT NGA ARKF  EID GQVG
Sbjct: 397 MKCYTEEIFGPVLVILNADTLDEAISLVNANPYGNGTAIFTTNGAAARKFVNEIDAGQVG 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKT+TQLWRE+DVTH++AAV+M
Sbjct: 457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTITQLWRETDVTHTQAAVAM 516

Query: 121 PVMQ 124
           P M+
Sbjct: 517 PTMK 520

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
UNIPROTKB|Q17M80	521	AAEL001134 "Probable methylmal	1.0	0.238	0.806	6.3e-53
FB|FBgn0023537	520	CG17896 [Drosophila melanogast	1.0	0.238	0.758	5.8e-50
UNIPROTKB|Q29HB2	520	GA14712 "Probable methylmalona	1.0	0.238	0.75	2.5e-49
ZFIN|ZDB-GENE-030131-9192	525	aldh6a1 "aldehyde dehydrogenas	0.991	0.234	0.699	3.4e-45
UNIPROTKB|J9P2I9	533	ALDH6A1 "Uncharacterized prote	0.991	0.230	0.715	5.6e-45
UNIPROTKB|F1S3H1	534	ALDH6A1 "Uncharacterized prote	0.991	0.230	0.715	7.1e-45
DICTYBASE|DDB_G0289085	528	mmsdh "methylmalonate-semialde	0.991	0.232	0.653	1.5e-44
UNIPROTKB|F1N7K8	537	ALDH6A1 "Methylmalonate-semial	0.991	0.229	0.707	1.9e-44
UNIPROTKB|Q07536	537	ALDH6A1 "Methylmalonate-semial	0.991	0.229	0.707	1.9e-44
UNIPROTKB|G3V4Z4	252	ALDH6A1 "Methylmalonate-semial	0.991	0.488	0.699	3.1e-44

UNIPROTKB|Q17M80 AAEL001134 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Aedes aegypti (taxid:7159)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 100/124 (80%), Positives = 111/124 (89%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             MKCY EEIFGPVLVCLTVDT+DEA+ +IN NPYGNGTAIFT NGATARKF  EID GQVG
Sbjct:   398 MKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVNEIDVGQVG 457

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSRGSF+G+ HFYGKQG  FYT+TKTVTQLWRE DV+H+KAAV+M
Sbjct:   458 VNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWREGDVSHTKAAVAM 517

Query:   121 PVMQ 124
             P M+
Sbjct:   518 PTMK 521

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0019859 "thymine metabolic process" evidence=ISS

FB|FBgn0023537 CG17896 [Drosophila melanogaster (taxid:7227)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 94/124 (75%), Positives = 108/124 (87%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             MKCY EEIFGPVLV L  DTLD+AI I+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct:   397 MKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWR++DVTH++AAV+M
Sbjct:   457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRKTDVTHTQAAVAM 516

Query:   121 PVMQ 124
             P M+
Sbjct:   517 PTMK 520

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q29HB2 GA14712 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 93/124 (75%), Positives = 106/124 (85%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             MKCY EEIFGPVLV L  D LD+AI I+N NPYGNGTA+FT NGA ARKF  EID GQVG
Sbjct:   397 MKCYTEEIFGPVLVILKADNLDDAIDIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVG 456

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTG+RGSF G++HFYGKQG  FYT+TKTVTQLWRE+DV H++AAV+M
Sbjct:   457 VNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRETDVNHTQAAVAM 516

Query:   121 PVMQ 124
             P M+
Sbjct:   517 PTMK 520

GO:0000062 "fatty-acyl-CoA binding" evidence=ISS

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0019859 "thymine metabolic process" evidence=ISS

ZFIN|ZDB-GENE-030131-9192 aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Danio rerio (taxid:7955)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 86/123 (69%), Positives = 98/123 (79%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  D+LDEAI I+NKNPYGNGTAIFT NGA ARK+S E+D GQ+G
Sbjct:   401 MTCYKEEIFGPVLVVLEADSLDEAIKIVNKNPYGNGTAIFTTNGAAARKYSHEVDVGQIG 460

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSRGSF G+ +FYGKQG  FYT+ KT+T  W+  D T    AV+M
Sbjct:   461 VNVPIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFYTQIKTITSQWKAEDATLKSPAVTM 520

Query:   121 PVM 123
             P M
Sbjct:   521 PTM 523

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 88/123 (71%), Positives = 97/123 (78%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  DTLDEAI I+N NPYGNGTAIFT NGATARK+S  +D GQVG
Sbjct:   409 MTCYKEEIFGPVLVVLETDTLDEAIKIVNSNPYGNGTAIFTTNGATARKYSHLVDVGQVG 468

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct:   469 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQIKTITSQWKEEDATLSSPAVVM 528

Query:   121 PVM 123
             P M
Sbjct:   529 PTM 531

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 88/123 (71%), Positives = 97/123 (78%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  DTLDEAI I+N NPYGNGTAIFT NGATARK+S  +D GQVG
Sbjct:   410 MTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVG 469

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct:   470 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVM 529

Query:   121 PVM 123
             P M
Sbjct:   530 PTM 532

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

DICTYBASE|DDB_G0289085 mmsdh "methylmalonate-semialdehyde dehydrogenase (acylating)" [Dictyostelium discoideum (taxid:44689)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 81/124 (65%), Positives = 104/124 (83%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M+CYKEEIFGPVLVCL VDT+D+AI +IN NPYGNGTA+FT++GA ARK+ +EID GQVG
Sbjct:   402 MRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQREIDVGQVG 461

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHS-KAAVS 119
             IN+PIPVPL  FSFTGSRGSF+G  HFYGK G  F+T+ KT+T  WR+ D++H   ++++
Sbjct:   462 INLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRDDDISHGVSSSMN 521

Query:   120 MPVM 123
             MP++
Sbjct:   522 MPIL 525

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA;ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISS

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1N7K8 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 87/123 (70%), Positives = 97/123 (78%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  DTLDEAI I+N NPYGNGTAIFT NGATARK+S  +D GQVG
Sbjct:   413 MTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVG 472

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D + S  AV M
Sbjct:   473 VNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSPAVVM 532

Query:   121 PVM 123
             P M
Sbjct:   533 PTM 535

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|Q07536 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 87/123 (70%), Positives = 97/123 (78%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  DTLDEAI I+N NPYGNGTAIFT NGATARK+S  +D GQVG
Sbjct:   413 MTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVG 472

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D + S  AV M
Sbjct:   473 VNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSPAVVM 532

Query:   121 PVM 123
             P M
Sbjct:   533 PTM 535

GO:0000062 "fatty-acyl-CoA binding" evidence=IDA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS;IDA

GO:0019859 "thymine metabolic process" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|G3V4Z4 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 86/123 (69%), Positives = 97/123 (78%)

Query:     1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             M CYKEEIFGPVLV L  +TLDEAI I+N NPYGNGTAIFT NGATARK++  +D GQVG
Sbjct:   128 MTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATARKYAHLVDVGQVG 187

Query:    61 INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
             +NVPIPVPL MFSFTGSR SF G+ +FYGKQG  FYT+ KT+T  W+E D T S  AV M
Sbjct:   188 VNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVM 247

Query:   121 PVM 123
             P M
Sbjct:   248 PTM 250

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q02253	MMSA_RAT	1, ., 2, ., 1, ., 2, 7	0.6910	0.9919	0.2299	yes	N/A
Q7KW39	MMSA_DROME	1, ., 2, ., 1, ., 2, 7	0.7580	1.0	0.2384	yes	N/A
Q29HB2	MMSA_DROPS	1, ., 2, ., 1, ., 2, 7	0.75	1.0	0.2384	yes	N/A
P52713	MMSA_CAEEL	1, ., 2, ., 1, ., 2, 7	0.6854	0.9919	0.2351	yes	N/A
Q7QC84	MMSA_ANOGA	1, ., 2, ., 1, ., 2, 7	0.8064	1.0	0.2380	yes	N/A
Q02252	MMSA_HUMAN	1, ., 2, ., 1, ., 2, 7	0.6991	0.9919	0.2299	yes	N/A
Q9EQ20	MMSA_MOUSE	1, ., 2, ., 1, ., 2, 7	0.6991	0.9919	0.2299	yes	N/A
Q0WM29	MMSA_ARATH	1, ., 2, ., 1, ., 2, 7	0.6048	0.9758	0.1993	yes	N/A
Q07536	MMSA_BOVIN	1, ., 2, ., 1, ., 2, 7	0.7073	0.9919	0.2290	yes	N/A
Q54I10	MMSA_DICDI	1, ., 2, ., 1, ., 2, 7	0.6532	0.9919	0.2329	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	124
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-71
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	5e-60
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	2e-48
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-34
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-32
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	2e-27
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-26
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	2e-21
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-19
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	4e-19
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	4e-19
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	3e-17
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	6e-17
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	6e-17
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	6e-17
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	7e-17
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	7e-17
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	9e-17
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	1e-16
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	4e-16
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	7e-16
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-15
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-15
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	2e-15
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	3e-15
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	3e-15
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	7e-15
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	8e-15
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	9e-15
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-14
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	3e-14
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	4e-14
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	5e-14
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	6e-14
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	6e-14
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	9e-14
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	1e-13
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-13
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	5e-13
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	6e-13
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	7e-13
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	7e-13
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-12
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	2e-12
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-12
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	3e-12
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	3e-12
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	4e-12
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	6e-12
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	7e-12
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	7e-12
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	9e-12
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	1e-11
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-11
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-11
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-11
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	3e-11
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	4e-11
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	4e-11
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	4e-11
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	6e-11
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	7e-11
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	1e-10
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	2e-10
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	2e-10
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	3e-10
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	5e-10
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	7e-10
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	1e-09
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-09
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-09
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	2e-09
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	2e-09
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	3e-09
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	3e-09
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	4e-09
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	1e-08
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-08
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-08
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	3e-08
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	4e-08
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	5e-08
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	5e-08
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	6e-08
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	8e-08
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	2e-07
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	3e-07
COG0014	417	COG0014, ProA, Gamma-glutamyl phosphate reductase	5e-07
cd07079	406	cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phos	5e-07
PRK00197	417	PRK00197, proA, gamma-glutamyl phosphate reductase	6e-07
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	1e-06
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	1e-06
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	2e-06
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-06
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	4e-06
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	2e-04
TIGR00407	398	TIGR00407, proA, gamma-glutamyl phosphate reductas	2e-04
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	3e-04
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	8e-04
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	8e-04
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	0.001
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	0.002

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  220 bits (562), Expect = 2e-71
 Identities = 76/106 (71%), Positives = 85/106 (80%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK YKEEIFGPVL  + VDTLDEAI+IIN NPYGNG AIFT +GA ARKF +E+D G VG
Sbjct: 373 MKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVG 432

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 106
           INVPIPVPL+ FSF G +GSF G+ HFYGK G  FYT+TKTVT  W
Sbjct: 433 INVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  190 bits (485), Expect = 5e-60
 Identities = 71/106 (66%), Positives = 84/106 (79%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK Y+EEIFGPVL  L  DTL+EAI++IN +PYGNGTAIFT +GA AR+F  EI+ GQVG
Sbjct: 372 MKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVG 431

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 106
           +NVPIPVPL  FSFTG + SF G++H YGKQG +FYT  KTVT  W
Sbjct: 432 VNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score =  162 bits (411), Expect = 2e-48
 Identities = 73/121 (60%), Positives = 94/121 (77%), Gaps = 3/121 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+CYKEEIFGPVLVC+  ++ DEAISIINKN YGNG AIFT++GA ARKF  +I+ GQ+G
Sbjct: 485 MECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIG 544

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           INVPIPVPL  FSFTG++ SF G+ +FYGK G  F+T+ K VTQ  ++    HS  ++++
Sbjct: 545 INVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKD---IHSPFSLAI 601

Query: 121 P 121
           P
Sbjct: 602 P 602

Length = 604

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  123 bits (312), Expect = 1e-34
 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  +     DEAI + N   YG    +FTN+   A + ++ ++ G V 
Sbjct: 360 MRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVW 419

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN           F G + S  G     GK+G   YTETKTV
Sbjct: 420 INDYTTGDPEALPFGGFKQSGFG--REGGKEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  118 bits (298), Expect = 1e-32
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  +     +EAI + N   YG   AIFT + A A + ++ ++ G VG
Sbjct: 365 MRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVG 424

Query: 61  INVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 108
           IN       ++   F G + S LG     GK G   +TE KTVT     
Sbjct: 425 INDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVTIKLGP 471

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  103 bits (259), Expect = 2e-27
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  +     +EAI++ N   YG    +FT +   A + ++ +  G V 
Sbjct: 266 MPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVY 325

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN           F G + S +G     G  G   YT TKTV 
Sbjct: 326 INDSSIGVGPEAPFGGVKNSGIGREG--GPYGLEEYTRTKTVV 366

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  101 bits (254), Expect = 1e-26
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  +     +EAI + N   YG    +FT +   A + ++ ++ G V 
Sbjct: 331 MPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVW 390

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN           F G + S +G     G  G   YTE KTVT
Sbjct: 391 INDYSVGAEPSAPFGGVKQSGIGREG--GPYGLEEYTEPKTVT 431

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 87.9 bits (219), Expect = 2e-21
 Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPV   +  DT DE I+  N  PYG    +FT + A A + ++ ++ G VG
Sbjct: 351 MLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVG 410

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVTQ 104
           IN  +      P     F G + S LG E    GK+G   Y ETK V+ 
Sbjct: 411 INTGLISDAEAP-----FGGVKESGLGREG---GKEGLEEYLETKYVSL 451

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 81.8 bits (203), Expect = 2e-19
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            +  +EEIFGPV+  +  D  +EAI + N  PYG    ++T +   A + ++ ++ G V 
Sbjct: 355 SRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVW 414

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N  +   L    F G + S +G E    G     FYTE K V 
Sbjct: 415 VNCWLVRDLRT-PFGGVKASGIGREG---GDYSLEFYTELKNVC 454

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 81.1 bits (201), Expect = 4e-19
 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 17/110 (15%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPV   + V   DEA++I N   +G    I T +   A  F + ++ G V 
Sbjct: 371 MRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVM 430

Query: 61  INVP-----IPVPLSMFSFTGSRGSFLGENHFYGKQGFY---FYTETKTV 102
           +N+P       VP     F G +GS  G      +QG     FYT  KTV
Sbjct: 431 VNLPTAGVDYHVP-----FGGRKGSSYG----PREQGEAALEFYTTIKTV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 80.7 bits (200), Expect = 4e-19
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 16/105 (15%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN--- 62
           EEIFGPVL  +  D   EAI++ N   YG    ++T +G  A + ++ +  GQV +N   
Sbjct: 358 EEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYG 417

Query: 63  ----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
               + +P       F G + S  G     G +  Y YT+TKTV 
Sbjct: 418 AGGGIELP-------FGGVKKS--GHGREKGLEALYNYTQTKTVA 453

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 75.5 bits (186), Expect = 3e-17
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  LT DT+DEAI++ N   YG    +++ +  TA   ++ I  G V 
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW 413

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N  +     +  F G + S +G E    G+ G   YTE KTV 
Sbjct: 414 VNTFLDGSPEL-PFGGFKQSGIGREL---GRYGVEEYTELKTVH 453

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 74.8 bits (185), Expect = 6e-17
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  Y EE+FGPV   + V   +EAI++ N +P+G G ++FT +   A + ++ ++ G V 
Sbjct: 329 MPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVF 388

Query: 61  IN 62
           IN
Sbjct: 389 IN 390

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 75.0 bits (185), Expect = 6e-17
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  +   +LDEAI + N + YG  + I+T N  TA + + E++ G+  
Sbjct: 368 MEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETY 427

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN      +  F   G + S LG     GK G   Y +TK V
Sbjct: 428 INRENFEAMQGFH-AGWKKSGLGGAD--GKHGLEEYLQTKVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 74.8 bits (185), Expect = 6e-17
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  +  D  DEAI+I N  PYG    +++ +   AR  ++ +  GQV 
Sbjct: 367 MTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVH 426

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN     P +   F G + S  G E   +G+ G   + E K++ 
Sbjct: 427 INGAAFNPGA--PFGGYKQSGNGRE---WGRYGLEEFLEVKSIQ 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 74.5 bits (184), Expect = 7e-17
 Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  Y EE FGPV+  + V   +EA+ I N + YG   A+FT + A A   ++ I+ G V 
Sbjct: 331 MDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVH 390

Query: 61  INVPIPVPLSM-------FSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN        M           G + S  G   F GK G   +TETK +T
Sbjct: 391 IN-------GMTVHDEPTLPHGGVKSS--GYGRFNGKWGIDEFTETKWIT 431

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 74.6 bits (184), Expect = 7e-17
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  KEEIFGPV+  L   T DE I   N   YG    +FT +   A + S+ +  G V 
Sbjct: 376 MKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVW 435

Query: 61  IN------VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N        +P       F G + S  G E    G++G   YT+ K VT
Sbjct: 436 VNTYNVFDAAVP-------FGGFKQSGFGREL---GEEGLEEYTQVKAVT 475

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 74.3 bits (183), Expect = 9e-17
 Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV       T+DE I   N   YG   A+FT +   A  FS  +  G V 
Sbjct: 380 MRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVW 439

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N    V      F G + S  G     G+ G   YTE KTVT
Sbjct: 440 VNCYNVVS-PQAPFGGYKMSGNGRE--LGEYGLQEYTEVKTVT 479

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ + EE FGPV+    V   DEAI + N   YG   +++T +GA  R+ +  +  G V 
Sbjct: 351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVN 410

Query: 61  IN-------VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           +N         I  P+      G + S LG  H  G +G   YTET+TV  
Sbjct: 411 VNEGYAAAWASIDAPMG-----GMKDSGLGRRH--GAEGLLKYTETQTVAV 454

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 72.2 bits (178), Expect = 4e-16
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 13/103 (12%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-- 62
           +EE+FGPVL  +  D  +EAI++ N + YG    I+T + A A + ++ I+ G V +N  
Sbjct: 361 QEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTY 420

Query: 63  --VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
             +    P     F G + S +G EN   G +    YT+TK+V
Sbjct: 421 RALSPSSP-----FGGFKDSGIGREN---GIEAIREYTQTKSV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 71.8 bits (177), Expect = 7e-16
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EEIFGPVL  +  D  D+A+ I N + YG   +++T +       ++ I  G VG+N   
Sbjct: 377 EEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR 436

Query: 66  PVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
               +   F G + S +G     G +G   Y ETK++ 
Sbjct: 437 LDFGA--PFGGFKQSGIGREG--GPEGLDAYLETKSIY 470

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 71.3 bits (175), Expect = 1e-15
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV+V     T +EAI   N   YG   A+FT +   A + ++E++ G V 
Sbjct: 382 MRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVW 441

Query: 61  INVP----IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN      + VP   F  +G  G  LGE       G   YT+TK V
Sbjct: 442 INSSNDSDVGVPFGGFKMSGI-GRELGEY------GLETYTQTKAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  +T D+ +EA+++ N + YG   +++T++ + A + ++ +  G V 
Sbjct: 362 MRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVW 421

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +N      I  P     F G + S  G +          YTE KT 
Sbjct: 422 VNCFDEGDITTP-----FGGFKQSGNGRD--KSLHALDKYTELKTT 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 70.5 bits (173), Expect = 2e-15
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EEIFGPVL  +T    +EAI+I N   YG G  ++T +   A + ++ I  G+V 
Sbjct: 378 MRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVW 437

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETK 100
           +N     P +   F G + S +G E H   K     Y +TK
Sbjct: 438 VNCYHQYP-AHAPFGGYKKSGIGRETH---KMMLDHYQQTK 474

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 69.9 bits (172), Expect = 3e-15
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 14/111 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EE FGPV+    V  +DEA+   N  PYG   +++T + A  R  +  I  G V 
Sbjct: 387 MELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVN 446

Query: 61  INVP-------IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           +N         +  P+      G + S LG  H  G +G   YTE++T+  
Sbjct: 447 VNEGYAAAWGSVDAPMG-----GMKDSGLGRRH--GAEGLLKYTESQTIAT 490

Length = 524

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 69.9 bits (172), Expect = 3e-15
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EE FGPVL  + V   DEAI++ N + YG   ++F+ + A A   ++ ++ G V 
Sbjct: 351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410

Query: 61  IN 62
           IN
Sbjct: 411 IN 412

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 68.9 bits (169), Expect = 7e-15
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EE FGPV   + V  LDEAI+I N   YG  + + TN+  T ++  + +D G V +N   
Sbjct: 354 EETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN--- 410

Query: 66  PVP---LSMFSFTGSRGSFLGENHFYGKQG----FYFYTETKTVT 103
            VP     +  F G + S LG     GK+G        T  KT +
Sbjct: 411 EVPGFRSELSPFGGVKDSGLG-----GKEGVREAMKEMTNVKTYS 450

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 68.8 bits (169), Expect = 8e-15
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V+ ++EAI + NK+ YG   +IFT +   ARK +  ++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVN 430

Query: 61  IN 62
           IN
Sbjct: 431 IN 432

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 68.7 bits (169), Expect = 9e-15
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  ++EEIFGPV   +  D  +EA+ + N   YG   A+FT +   A  F++ ++ G V 
Sbjct: 330 MPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVH 389

Query: 61  IN 62
           IN
Sbjct: 390 IN 391

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK   EE+F PV+     DTLDEAI++ N +PYG    +FTN+   A K ++E++ G V 
Sbjct: 352 MKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM 411

Query: 61  IN 62
           IN
Sbjct: 412 IN 413

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 11/101 (10%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EEIFGPVLV +  D  DEA+ I N + YG    +++ +   A + ++ I  G VGIN   
Sbjct: 364 EEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGIN--- 420

Query: 66  PVPLSMFS----FTGSRGSFLGENHFYGKQGFYFYTETKTV 102
                 +     F G + S LG     G +G   + ETK++
Sbjct: 421 --GGGGYGPDAPFGGYKQSGLGRE--NGIEGLEEFLETKSI 457

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 67.0 bits (164), Expect = 4e-14
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            + ++EEIFGPVL   +  T DEAI++ N + YG   A+ + +     + ++ ++ G V 
Sbjct: 356 SRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVW 415

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           IN   P       + G + S +G     G+ G   Y E K +T+
Sbjct: 416 INCSQPC-FPQAPWGGYKRSGIGRE--LGEWGLDNYLEVKQITR 456

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 66.6 bits (163), Expect = 5e-14
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  ++EE+FGPV       T +EAI+I N    G    IFT +   A + S+ ++ G VG
Sbjct: 394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG 453

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +N  + +   +  F G + S LG      K G   Y E K V
Sbjct: 454 VNEGL-ISTEVAPFGGVKQSGLGREG--SKYGIDEYLEIKYV 492

Length = 498

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 66.3 bits (162), Expect = 6e-14
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EEIFGPVL   T    +EA+ I N   YG G  ++T +G TA +  + I  G+V 
Sbjct: 377 MRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVW 436

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENH 86
            N     P +  +F G + S +G ENH
Sbjct: 437 TNCYHLYP-AHAAFGGYKQSGIGRENH 462

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 66.4 bits (163), Expect = 6e-14
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKF--SQEIDCGQ 58
            +  +EE F P+L  +  D+L+EAI+I N  P G  ++IFT +   A ++   +  DCG 
Sbjct: 372 ARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGI 431

Query: 59  VGINVP 64
           V +N+P
Sbjct: 432 VNVNIP 437

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 65.8 bits (161), Expect = 9e-14
 Identities = 37/107 (34%), Positives = 48/107 (44%), Gaps = 13/107 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  DT +E I   N   YG    +FT +   A +   ++  G   
Sbjct: 354 MTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCW 413

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
           IN     P+ VP     F G + S  G EN   G      YT+ KTV
Sbjct: 414 INTYNISPVEVP-----FGGYKQSGFGREN---GTAALEHYTQLKTV 452

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  +EE+FGPV+V +     +EA+ I N   YG G ++F  +   AR+ + +++ G V 
Sbjct: 361 MKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVA 420

Query: 61  IN 62
           IN
Sbjct: 421 IN 422

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  +     +EAI   N   YG    ++TN+   A + +  ++ G + 
Sbjct: 376 MRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIW 435

Query: 61  INVP----IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +N      +P P     F G + S +G     G   F FYTETK V
Sbjct: 436 VNSQNVRHLPTP-----FGGVKASGIGREG--GTYSFDFYTETKNV 474

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 63.6 bits (155), Expect = 5e-13
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPVL  +  DTL+EAI++ N + YG  ++I+T N   A K  + +  G+  
Sbjct: 306 MSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 365

Query: 61  IN 62
           IN
Sbjct: 366 IN 367

Length = 409

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 63.5 bits (155), Expect = 6e-13
 Identities = 19/62 (30%), Positives = 30/62 (48%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  + EEIFGPV      D+ +EA+++ N   YG    I + +   A   +  +  G + 
Sbjct: 341 MPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLH 400

Query: 61  IN 62
           IN
Sbjct: 401 IN 402

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 63.2 bits (154), Expect = 7e-13
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 11/104 (10%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN- 62
            +EE FGPV+  +  +  +E I +IN  P+G   +++TNN + A ++   I+ G V +N 
Sbjct: 378 MREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNM 437

Query: 63  ---VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
              +   VP     F G + S +G    +G      YTE K+V 
Sbjct: 438 HTFLDPAVP-----FGGMKQSGIGRE--FGSAFIDDYTELKSVM 474

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score = 63.5 bits (155), Expect = 7e-13
 Identities = 24/64 (37%), Positives = 39/64 (60%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPV+  + V +L+EAI I N   YG  +AI+T +   A +  ++++ G   
Sbjct: 373 MRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITY 432

Query: 61  INVP 64
           +N P
Sbjct: 433 VNAP 436

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 62.4 bits (152), Expect = 1e-12
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEE+FGPVL    V   +EA+ I N   YG   ++FTN+   A K ++E++ G V 
Sbjct: 355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414

Query: 61  IN 62
           IN
Sbjct: 415 IN 416

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 19/111 (17%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL  L      E ++  N   YG   AI+TN+ + A + ++ ++ G V 
Sbjct: 354 MRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW 413

Query: 61  IN--------VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN         P         F G + S +G       +    YT+ K V 
Sbjct: 414 INGSSRHFLGAP---------FGGVKNSGIGREE--CLEELLSYTQEKNVN 453

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
           +   EEIFGP       D+ +E I++ N  PYG   +++T + + A + +++++ G V +
Sbjct: 380 RVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWV 439

Query: 62  NVPIPVPLSMF------SFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           N       S F       F GS+ S +G     G     FYTE   V
Sbjct: 440 N-------SWFLRDLRTPFGGSKLSGIGREG--GVHSLEFYTELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
           +  +EEIFGPVLV LT  T  EA+++ N  PYG   ++++ N + A + +  +  G V I
Sbjct: 381 RIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWI 440

Query: 62  NVPIPVPLSMFS----FTGSRGSFLGENHFYGKQGFYFYTETK 100
           N       ++F     F G R S  G     GK+G Y Y    
Sbjct: 441 NG-----HNLFDAAAGFGGYRESGFGREG--GKEGLYEYLRPS 476

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPV   +  D  +EA+ + N   YG   A+FT++     +F++ ID G   
Sbjct: 362 MEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTH 421

Query: 61  INVPIPV---PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN   PV   P   F   G + S LG   F G+     +T  K ++
Sbjct: 422 IN-DQPVNDEPHVPFG--GEKNSGLGR--FNGEWALEEFTTDKWIS 462

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPVL   T D   EA+++ N   YG   +++T + A A + ++ I  G V IN  
Sbjct: 359 QEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDW 418

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
             +  +     G R S LG  H  G      + E K +  
Sbjct: 419 NKL-FAEAEEGGYRQSGLGRLH--GVAALEDFIEYKHIYL 455

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 60.8 bits (148), Expect = 6e-12
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE FGPV   +     +EA+ + N   YG   AI TN+   A K ++ ++ G V 
Sbjct: 350 MRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVH 409

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN P  +  +   F G + S  G     G+     +TE K +T
Sbjct: 410 INDPTILDEAHVPFGGVKASGFGR--EGGEWSMEEFTELKWIT 450

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 60.6 bits (147), Expect = 7e-12
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  KEEIFGPV+  +   T +EAI   N + YG   A+FTNN   A + +  +  G V 
Sbjct: 379 MKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVW 438

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +N    +   VP     F G + S +G     G+     YT+ K V
Sbjct: 439 VNCYNLLHHQVP-----FGGYKQSGIGRE--LGEYALENYTQIKAV 477

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 60.5 bits (147), Expect = 7e-12
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ Y EE+FGPV     V  +DEAI I N   +G G+  +T + A   +F  +++ GQV 
Sbjct: 356 MRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVF 415

Query: 61  IN 62
           IN
Sbjct: 416 IN 417

Length = 457

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 60.1 bits (146), Expect = 9e-12
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 10/103 (9%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
            EE FGPV+  +  D  +EAI I N   YG    IFT +   A K +++++ G V +N  
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYF----YTETKTVT 103
                    F G + S        G++G  +     TE KTV 
Sbjct: 416 SAFRTDWMPFGGVKES------GVGREGVPYAMEEMTEEKTVV 452

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE+FGPV+     D  DEA++ +N + +G    +FT +   A +   E++ G V 
Sbjct: 351 MEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVV 410

Query: 61  IN-VP 64
           IN VP
Sbjct: 411 INDVP 415

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EEIFGPV+     D  DEAI + N   YG  ++++T +   A + S  +D G V +N  I
Sbjct: 355 EEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHI 414

Query: 66  PVPLSMFSFTGSRGSFLGENHFYGKQ----GFYFYTETKTVT 103
           P+   M    G + S  G    YGK         YT  K V 
Sbjct: 415 PLAAEM-PHGGFKQS--G----YGKDLSIYALEDYTRIKHVM 449

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 11/102 (10%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-- 62
            EE FGPVL  L     DE I+  N + YG G ++++++   A   ++ ++ G V IN  
Sbjct: 350 DEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTH 409

Query: 63  --VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
             +    P     F G + S +G    +G +G   YT+T+ +
Sbjct: 410 GALDPDAP-----FGGHKQSGIGVE--FGIEGLKEYTQTQVI 444

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 10/67 (14%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNP-----YGNGTAIFTNNGATARKFSQEID 55
           M+  +EEIFGP+L  LT D+LDEAI  IN  P     Y      F  + A   +  +   
Sbjct: 332 MRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALY-----YFGEDKAEQDRVLRRTH 386

Query: 56  CGQVGIN 62
            G V IN
Sbjct: 387 SGGVTIN 393

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPV   +   T DE I + N + YG G  +FT +   A + ++ ++ G+V 
Sbjct: 373 MRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVW 432

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
           +N    +P     F G + S +G E H   K     YT+ K +
Sbjct: 433 VNTYNQIPAGA-PFGGYKKSGIGRETH---KSMLDAYTQMKNI 471

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 58.3 bits (141), Expect = 4e-11
 Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  LT    DE I+  N   YG    +FT +   A + + +++ G V 
Sbjct: 371 MTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVW 430

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETK 100
           IN     P     F G + S +G EN   GK     YTE K
Sbjct: 431 INTYNLYPAEA-PFGGYKQSGIGREN---GKAALAHYTEVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 3/100 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEE FGP+      D  +E I+I N    G     F+ + +   + ++ ++ G VG
Sbjct: 352 MLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVG 411

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 100
           IN  +   +    F G + S LG      K G   Y ETK
Sbjct: 412 INTGLISNVVA-PFGGVKQSGLGREG--SKYGIEEYLETK 448

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 58.3 bits (142), Expect = 4e-11
 Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 13/104 (12%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNP-----YGNGTAIFTNNGATARKFSQEIDCGQV 59
           +EEIFGP+L  LT D LDEAI  IN  P     Y     +F+ + A   +   E   G V
Sbjct: 328 QEEIFGPILPILTYDDLDEAIEFINSRPKPLALY-----LFSEDKAVQERVLAETSSGGV 382

Query: 60  GIN-VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
            +N V +   +    F G   S +G  H  GK GF  ++  K+V
Sbjct: 383 CVNDVLLHAAIPNLPFGGVGNSGMGAYH--GKAGFDTFSHLKSV 424

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           +EEIFGPVL  +     DEA+ I N   YG    +F+ +     +  +E + G +  N
Sbjct: 411 QEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYAN 468

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 57.7 bits (140), Expect = 7e-11
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPVL     DT +EAI + N  PYG   A++T + A A + ++ +  G V 
Sbjct: 372 MRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVW 431

Query: 61  IN 62
           IN
Sbjct: 432 IN 433

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 57.1 bits (138), Expect = 1e-10
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPVL  +  D  D+A+ I N +PYG    +F  +   A   +  +  G V +N  
Sbjct: 382 REEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVNGG 441

Query: 65  I----PVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +      P     F G + S +G     G  GF  Y ETK +
Sbjct: 442 VWYSADAP-----FGGYKQSGIGRE--MGVAGFEEYLETKLI 476

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 18/107 (16%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPVL  +     DE I++ N + YG    ++T +   A + +  ++ G V +N  
Sbjct: 360 REEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQG 419

Query: 65  IPVPLSMFSFTGSRGSFLGE--------NHFYGKQGFYFYTETKTVT 103
                   S+ G + S LG          HF         T+ KTV 
Sbjct: 420 G-GQQPGQSYGGFKQSGLGREASLEGMLEHF---------TQKKTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 25/66 (37%), Positives = 36/66 (54%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE+FGPVL   T  T DEAI + N + YG   A+ +N+     + S+    G V 
Sbjct: 387 MQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVW 446

Query: 61  INVPIP 66
           IN   P
Sbjct: 447 INCSQP 452

Length = 503

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 13/107 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  LT D  DE I+  N   YG    +FT + + A +   +++ G   
Sbjct: 379 MTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICW 438

Query: 61  INV----PIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
           IN     P  +P       G + S +G EN   G      YT+ K+V
Sbjct: 439 INTWGESPAEMP-----VGGYKQSGIGREN---GIATLEHYTQIKSV 477

Length = 488

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-V 63
           +EEIFGP+L  LT DTLDEAI II   P      +F+ +    +K  + +  G   IN  
Sbjct: 328 QEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDT 387

Query: 64  PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
            + +      F G   S +G  H  GK  F  ++  K++
Sbjct: 388 IMHLANPYLPFGGVGNSGMGSYH--GKYSFDTFSHKKSI 424

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 54.7 bits (132), Expect = 7e-10
 Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-VP 64
           EEIFGP+L  +TV  ++E+I IIN  P      +FT N    R+   E   G V  N   
Sbjct: 335 EEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTV 394

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +   +    F G   S  G  H  GK  F  ++  K V
Sbjct: 395 VQYAIDTLPFGGVGESGFGAYH--GKFSFDAFSHKKAV 430

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKF--SQEIDCGQVGIN 62
           KEE+FGPVL  +   TL+EAI I N  P G  ++IFT N  T  K+      DCG V +N
Sbjct: 394 KEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVN 453

Query: 63  VP 64
           +P
Sbjct: 454 IP 455

Length = 508

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 19/61 (31%), Positives = 26/61 (42%)

Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
              +EEIFGP+L  LT + +DE +  IN  P       F  +        +    G V I
Sbjct: 336 PLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVI 395

Query: 62  N 62
           N
Sbjct: 396 N 396

Length = 493

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 24/62 (38%), Positives = 30/62 (48%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   ++EIFGPV   L    LDE I   N   YG    +FT N  TA   S+ +  G V 
Sbjct: 430 MLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVW 489

Query: 61  IN 62
           +N
Sbjct: 490 VN 491

Length = 538

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGPV+  +     +EA+ I N   YG    ++T +   A + +  +  G V 
Sbjct: 351 MRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVW 410

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN         P     F G + S  G     G++    YTE K+V
Sbjct: 411 INTYNRFDPGSP-----FGGYKQSGFGREM--GREALDEYTEVKSV 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKF-----SQEID 55
               KEE F P+L  L  DTL+EAI+  N+ P G  ++IFT +   A ++     S   D
Sbjct: 368 APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGS---D 424

Query: 56  CGQVGINVP 64
           CG V +N+ 
Sbjct: 425 CGIVNVNIG 433

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 53.3 bits (128), Expect = 3e-09
 Identities = 24/62 (38%), Positives = 33/62 (53%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  ++EIFGPV   L   T+DE I   N + YG    +F+ N  TA   S+ +  G V 
Sbjct: 376 MKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVW 435

Query: 61  IN 62
           +N
Sbjct: 436 VN 437

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 25/76 (32%), Positives = 34/76 (44%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
            EEIFGP+L     D  DEAI++ N   +G    + +++ A   +F   I  G V  N P
Sbjct: 335 DEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP 394

Query: 65  IPVPLSMFSFTGSRGS 80
                S   F G   S
Sbjct: 395 TTGASSTAPFGGVGLS 410

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EE FGPV   +    +D+AI I N   YG  + + TN      +F  E+  G V 
Sbjct: 368 MTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVN 427

Query: 61  I-NVPIPVPLSMFSFTGSRGSFLGENHFYGKQG----FYFYTETKTVTQLW 106
           +  VP    L +  F G + S LG      K+G       +T  KT +  W
Sbjct: 428 VWEVP-GYRLELTPFGGIKDSGLGY-----KEGVQEAMKSFTNLKTYSLPW 472

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 24/62 (38%), Positives = 31/62 (50%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  +EEIFGPVL  +T + LDE I  IN  P      +F+ + A   K       G V 
Sbjct: 331 MKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVV 390

Query: 61  IN 62
           +N
Sbjct: 391 VN 392

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               +EEIFGPVLV     + ++A+ + N + YG G A++T + + A + S+ +  G V 
Sbjct: 391 ASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF 450

Query: 61  IN 62
           +N
Sbjct: 451 VN 452

Length = 494

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 20/62 (32%), Positives = 38/62 (61%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EE FGPV+  + V +  EAI+++N + YG   +++T + A A    ++++ G V 
Sbjct: 352 MRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVF 411

Query: 61  IN 62
           +N
Sbjct: 412 MN 413

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 49.8 bits (119), Expect = 3e-08
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  ++EIFGPV+  +   T++EAI   N   YG    I T +   A   S+ I  G + 
Sbjct: 393 MKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIW 452

Query: 61  IN 62
           +N
Sbjct: 453 VN 454

Length = 501

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 49.9 bits (119), Expect = 4e-08
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  ++EE+FGPV         + A+ + N + +G    IFT +   AR+ +  ++CG V 
Sbjct: 359 MTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVF 418

Query: 61  IN 62
           IN
Sbjct: 419 IN 420

Length = 462

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV 63
            + E+FGPV+     D  D+A+   N + YG  ++++T +   A + S  +  G   +N 
Sbjct: 375 VQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNT 434

Query: 64  PIP 66
              
Sbjct: 435 HFM 437

Length = 475

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 27/78 (34%), Positives = 37/78 (47%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           +EIFGPV+   + D LDEAI+  N  P     A+FT +   A K  + +D   V +N   
Sbjct: 359 QEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHT 418

Query: 66  PVPLSMFSFTGSRGSFLG 83
              +    F G R S  G
Sbjct: 419 AFRVDWMPFAGRRQSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 49.3 bits (118), Expect = 6e-08
 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 3/100 (3%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-VP 64
           EEIFGP+L  +TV  ++++I+ IN  P       FTNN    R+   E   G V  N   
Sbjct: 345 EEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAI 404

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           I        F G   S  G  H  GK  F  ++  K V +
Sbjct: 405 IQYACDSLPFGGVGESGFGRYH--GKYSFDTFSHEKAVLR 442

Length = 484

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 48.8 bits (117), Expect = 8e-08
 Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 13/95 (13%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINK--NP---YGNGTAIFTNNGATARKFSQEIDCGQV 59
           +EEIFGP+L  +TV+ LDEAI  IN    P   Y     +F+NN     K       G V
Sbjct: 328 QEEIFGPILPIVTVNNLDEAIEFINSREKPLALY-----VFSNNKKVINKILSNTSSGGV 382

Query: 60  GIN-VPIPVPLSMFSFTGSRGSFLGENHFYGKQGF 93
            +N   +   L    F G   S +G  H  GK  F
Sbjct: 383 CVNDTIMHYTLDSLPFGGVGNSGMGAYH--GKYSF 415

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 37/99 (37%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-V 63
            EE+FGPVL  + VD LDEAI +IN         IFT++ +           G V IN  
Sbjct: 338 SEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDT 397

Query: 64  PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
            I V +    F G   S  G  H  GK GF  +T  +TV
Sbjct: 398 LIHVGVDNAPFGGVGDSGYGAYH--GKYGFDTFTHERTV 434

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 24/114 (21%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPV+  +     D A+ I N   YG   A+ +NN     K  +E   G +  N  
Sbjct: 413 QEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFN-- 470

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYG--------KQG----FYFYTETKTVTQLW 106
                      G  G+ +G + F G        K G       + + KTV++++
Sbjct: 471 ----------RGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEMF 514

Length = 514

>gnl|CDD|223093 COG0014, ProA, Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 17  TVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
            VD+LDEAI+ IN    G+  AI T + A A +F  E+D   V +N
Sbjct: 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVN 367

Length = 417

>gnl|CDD|143398 cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

 Score = 46.7 bits (112), Expect = 5e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 4/41 (9%)

Query: 17  TVDTLDEAISIINKNPYGNG-T-AIFTNNGATARKFSQEID 55
            VD+LDEAI+ IN+  YG+G T AI T N  TA +F +E+D
Sbjct: 316 VVDSLDEAIAHINR--YGSGHTEAIVTENYETAERFLREVD 354

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). Length = 406

>gnl|CDD|234685 PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional

 Score = 46.2 bits (111), Expect = 6e-07
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)

Query: 17  TVDTLDEAISIINKNPYGNG-T-AIFTNNGATARKFSQEIDCGQVGIN 62
            VD+LDEAI+ IN+  YG+G T AI T + A A +F  E+D   V +N
Sbjct: 322 VVDSLDEAIAHINR--YGSGHTEAIVTEDYAAAERFLNEVDSAAVYVN 367

Length = 417

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-VP 64
           EEIFGP+L  LT++ L+E+  +I   P      +FT+N     +F+  +  G + +N + 
Sbjct: 346 EEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIA 405

Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           + + L    F G   S +G  H  GK  F  ++  K V
Sbjct: 406 VHLALHTLPFGGVGESGMGAYH--GKFSFDAFSHKKAV 441

Length = 484

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 40/83 (48%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + +++++E I   N + +G    +FT +   A   S  ++ G V 
Sbjct: 385 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQ 444

Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G + S +G
Sbjct: 445 INSAPARGPDHFPFQGLKDSGIG 467

Length = 496

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 3   CYKEEIFGPVL--VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               E+FGP+L  +    + LDEAI  IN   YG    I + +      + + ++ G + 
Sbjct: 403 DLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLY 462

Query: 61  INVPI 65
           IN  I
Sbjct: 463 INRNI 467

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 21/60 (35%), Positives = 31/60 (51%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EE FGP+L  +  D  DEAI+I N   +G    + +++     +F  EI  G V  N P+
Sbjct: 372 EEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPL 431

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 43.7 bits (103), Expect = 4e-06
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 12/108 (11%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPV+  +     DEA+ I N   YG    + +NN     +   E + G +  N  
Sbjct: 410 QEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRN 469

Query: 65  IP------VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 106
           I        P   F  +G+  S  G     G      + + KTVT+++
Sbjct: 470 ITGAIVGYQPFGGFKMSGT-DSKAG-----GPDYLALFMQAKTVTEMF 511

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 13/105 (12%)

Query: 5   KEEIFGPVLVCLTVDT--LDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           KEE FGP+++    D   +D  +   N   YG  + +FT +   A   S +++ G V +N
Sbjct: 386 KEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVN 445

Query: 63  V----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
                 +  P     F G + S  G++   G++    Y +TKTVT
Sbjct: 446 TYNKTDVAAP-----FGGFKQSGFGKD--LGEEALNEYLKTKTVT 483

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|161862 TIGR00407, proA, gamma-glutamyl phosphate reductase

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           + +E     L    V++L+ AI  IN+    +  AI T N A A +F   +D   V  N
Sbjct: 301 FDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHN 359

The related model TIGR01092 describes a full-length fusion protein delta l-pyrroline-5-carboxylate synthetase that includes a gamma-glutamyl phosphate reductase region as described by this model. Alternate name: glutamate-5-semialdehyde dehydrogenase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif [Amino acid biosynthesis, Glutamate family]. Length = 398

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 5   KEEIFGPVLVCLTV--DTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           +EEIFGPVL  +    D   EA+ + N  PYG    +++       +  +E   G + IN
Sbjct: 397 QEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYIN 456

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 7   EIFGPVLVCLTVDTLDEAISIINKNPYGNG---TAIFTNNGATARKFSQEI 54
           E FGPV   +  D+L EAI +  +   G G    ++ TN+ A AR+     
Sbjct: 397 EAFGPVATLMPYDSLAEAIELAAR---GRGSLVASVVTNDPAFARELVLGA 444

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 37.2 bits (86), Expect = 8e-04
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 5   KEEIFGPVL--VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
            EE+FGPVL  V      LD+ +  IN+  YG    + +    T R   +    G   +N
Sbjct: 402 SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN 461

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EE FGP+L  +  D  DEAI + N   +G    + +++     +F  EI  G V  N P+
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPL 433

Length = 487

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 5   KEEIFGPVL--VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           + E+FGPVL  V    D LDE I  IN   YG    + T    T    ++    G + +N
Sbjct: 476 QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVN 535

Length = 769

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
KOG2450|consensus	501		99.96
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.95
PLN02174	484	aldehyde dehydrogenase family 3 member H1	99.95
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	99.95
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.95
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.95
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.95
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	99.95
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.95
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.95
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.95
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	99.95
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.95
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	99.95
PLN02466	538	aldehyde dehydrogenase family 2 member	99.95
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	99.95
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.95
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	99.95
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.95
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.95
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	99.95
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	99.95
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	99.95
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	99.95
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.95
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.95
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.95
PLN02278	498	succinic semialdehyde dehydrogenase	99.95
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.95
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	99.94
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	99.94
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	99.94
PLN02203	484	aldehyde dehydrogenase	99.94
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	99.94
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	99.94
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	99.94
PLN02315	508	aldehyde dehydrogenase family 7 member	99.94
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	99.94
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	99.94
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.94
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.94
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	99.94
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	99.94
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.94
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	99.94
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	99.94
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	99.94
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	99.94
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	99.94
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	99.94
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	99.94
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	99.94
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	99.94
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	99.94
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	99.94
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	99.94
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	99.94
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.94
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.94
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	99.94
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	99.94
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.94
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	99.94
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.94
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	99.94
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	99.94
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	99.94
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	99.94
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	99.94
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.94
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	99.94
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	99.94
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	99.94
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	99.94
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.94
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	99.94
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.94
PLN02467	503	betaine aldehyde dehydrogenase	99.93
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	99.93
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	99.93
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.93
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	99.93
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	99.93
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	99.93
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	99.93
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.93
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	99.93
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	99.93
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	99.93
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.93
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.93
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	99.93
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	99.93
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	99.93
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.93
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	99.93
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.93
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.93
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	99.93
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.92
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.92
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.92
PRK11903	521	aldehyde dehydrogenase; Provisional	99.92
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.92
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.92
KOG2451|consensus	503		99.91
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.91
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.91
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.91
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.9
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.9
KOG2456|consensus	477		99.9
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.89
KOG2454|consensus	583		99.89
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.89
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.88
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.87
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.86
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.86
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.86
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.85
KOG2452|consensus	881		99.82
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.8
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.8
KOG2455|consensus	561		99.74
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.73
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.71
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.68
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.68
KOG2453|consensus	507		99.68
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.63
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.34
KOG2449|consensus	157		99.12
KOG4165|consensus	433		98.8
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	96.8
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	84.63
cd06572	390	Histidinol_dh Histidinol dehydrogenase, HisD, E.C	84.62
TIGR00069	393	hisD histidinol dehydrogenase. This model describe	84.61
PRK00877	425	hisD bifunctional histidinal dehydrogenase/ histid	83.69
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	83.13
PRK13770	416	histidinol dehydrogenase; Provisional	81.92
PRK12447	426	histidinol dehydrogenase; Reviewed	81.06

>KOG2450|consensus

Probab=99.96  E-value=9.3e-30  Score=201.63  Aligned_cols=104  Identities=36%  Similarity=0.482  Sum_probs=99.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |+|++||+||||++|++|++.||+|+++|.+.|||+++|||+|.++++++++++++|+||||+.... ....||||+|+|
T Consensus       394 m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~-~~~~PfgG~K~S  472 (501)
T KOG2450|consen  394 MRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVF-DAQVPFGGFKMS  472 (501)
T ss_pred             hhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccc-cccCCccccccc
Confidence            8899999999999999999999999999999999999999999999999999999999999998765 377899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+||+  .|.+++++|++.|+|+++..
T Consensus       473 G~GRE--~g~~~l~~ytevKtv~v~~~  497 (501)
T KOG2450|consen  473 GIGRE--LGEYGLEAYTEVKTVTVKLP  497 (501)
T ss_pred             cCCcc--ccHHHHhhcceeeEEEEeCC
Confidence            99998  69999999999999999874

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.95  E-value=5.9e-28  Score=198.18  Aligned_cols=107  Identities=65%  Similarity=1.149  Sum_probs=97.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       485 ~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~S  564 (604)
T PLN02419        485 MECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKAS  564 (604)
T ss_pred             CHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcC
Confidence            67899999999999999999999999999999999999999999999999999999999999875444467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++.++|++++++|++.|+|+++..
T Consensus       565 G~G~~~~~G~~gl~~ft~~K~v~~~~~  591 (604)
T PLN02419        565 FAGDLNFYGKAGVDFFTQIKLVTQKQK  591 (604)
T ss_pred             CCCCCcccHHHHHHHhhCeEEEEEccC
Confidence            999422379999999999999998764

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=99.95  E-value=4.3e-28  Score=195.11  Aligned_cols=104  Identities=28%  Similarity=0.408  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.
T Consensus       341 ~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~  420 (484)
T PLN02174        341 SLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGE  420 (484)
T ss_pred             ChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCc
Confidence            6899999999999999999999999999999999999999999999999999999999999987533 235689999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|++  +|.+++++|++.|+|.++.
T Consensus       421 SG~Gr~--~G~~gl~~ft~~K~v~~~~  445 (484)
T PLN02174        421 SGMGAY--HGKFSFDAFSHKKAVLYRS  445 (484)
T ss_pred             cccCcc--chHHHHHHhcceEEEEECC
Confidence            999976  6999999999999998764

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=99.95  E-value=4.9e-28  Score=194.47  Aligned_cols=103  Identities=32%  Similarity=0.486  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       377 ~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  455 (479)
T cd07116         377 MRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY-PAHAAFGGYKQS  455 (479)
T ss_pred             ChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCCccC
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+++++|
T Consensus       456 G~G~~--~g~~~l~~~~~~k~~~~~~  479 (479)
T cd07116         456 GIGRE--NHKMMLDHYQQTKNLLVSY  479 (479)
T ss_pred             cCCcc--ChHHHHHHhhceEEEEEeC
Confidence            99976  7999999999999998754

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.95  E-value=5e-28  Score=194.33  Aligned_cols=105  Identities=38%  Similarity=0.539  Sum_probs=97.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||+... ...+.+||||+|.
T Consensus       365 ~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~  444 (472)
T COG1012         365 MRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQ  444 (472)
T ss_pred             ChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCccc
Confidence            789999999999999999999999999999999999999999999999999999999999998743 4456789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||.|++  +|.+++++|++.|++.+++.
T Consensus       445 SG~G~~--~g~~~~~~~~~~k~v~~~~~  470 (472)
T COG1012         445 SGLGRE--GGKYGLEEFTEVKTVTIKLG  470 (472)
T ss_pred             ccCCcc--chHHHHHHHhcceEEEEecC
Confidence            999965  79999999999999998753

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.95  E-value=6.7e-28  Score=194.01  Aligned_cols=101  Identities=26%  Similarity=0.354  Sum_probs=94.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       380 ~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  458 (482)
T PRK11241        380 AKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKAS  458 (482)
T ss_pred             ChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCC-CCCCCcCCcccc
Confidence            6899999999999999999999999999999999999999999999999999999999999987543 346899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++|+++|++.|++++
T Consensus       459 G~G~~--~g~~g~~~ft~~k~v~~  480 (482)
T PRK11241        459 GLGRE--GSKYGIEDYLEIKYMCI  480 (482)
T ss_pred             ccCcc--cHHHHHHHhhcceEEEE
Confidence            99975  79999999999999875

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.95  E-value=1.1e-27  Score=192.43  Aligned_cols=105  Identities=71%  Similarity=1.171  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       373 ~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~S  452 (478)
T cd07085         373 MKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGS  452 (478)
T ss_pred             ChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999975444467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|+.+.+|++++++|++.|+++++
T Consensus       453 G~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         453 FFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             cCCCCcCChHHHHHHhcceEEEEEe
Confidence            9995223699999999999999865

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=99.95  E-value=7.3e-28  Score=192.03  Aligned_cols=101  Identities=32%  Similarity=0.391  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       352 ~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~S  431 (453)
T cd07094         352 TKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKES  431 (453)
T ss_pred             ChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999986544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       432 G~G~~--~g~~~~~~~~~~k~i~  452 (453)
T cd07094         432 GVGRE--GVPYAMEEMTEEKTVV  452 (453)
T ss_pred             ccCcC--ChHHHHHHHhceeEEe
Confidence            99975  7999999999999886

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.95  E-value=1.6e-27  Score=191.60  Aligned_cols=103  Identities=31%  Similarity=0.473  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       378 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  456 (480)
T cd07559         378 MRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQY-PAHAPFGGYKKS  456 (480)
T ss_pred             CcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCCccC
Confidence            5789999999999999999999999999999999999999999999999999999999999986543 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+++++|
T Consensus       457 G~G~~--~g~~~~~~~~~~k~v~~~~  480 (480)
T cd07559         457 GIGRE--THKMMLDHYQQTKNILVSY  480 (480)
T ss_pred             cCCcc--ChHHHHHHhhceEEEEEeC
Confidence            99976  6999999999999998764

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.95  E-value=1.9e-27  Score=192.14  Aligned_cols=104  Identities=29%  Similarity=0.393  Sum_probs=96.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ..+.+||||+|.|
T Consensus       393 ~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~S  471 (501)
T PLN02766        393 MKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA-FDPDCPFGGYKMS  471 (501)
T ss_pred             ChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccC
Confidence            679999999999999999999999999999999999999999999999999999999999998653 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|++++.+-
T Consensus       472 G~G~~--~G~~~l~~ft~~k~v~~~~~  496 (501)
T PLN02766        472 GFGRD--QGMDALDKYLQVKSVVTPLY  496 (501)
T ss_pred             cCCcc--chHHHHHHHhceEEEEEecc
Confidence            99975  79999999999999987654

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.95  E-value=1.7e-27  Score=188.38  Aligned_cols=103  Identities=34%  Similarity=0.389  Sum_probs=95.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+..... ...||||+|.|
T Consensus       306 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~S  384 (409)
T PRK10090        306 MSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA-MQGFHAGWRKS  384 (409)
T ss_pred             CHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999976443 45699999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++|+++|++.|++++++
T Consensus       385 G~G~~--~g~~gl~~f~~~k~v~~~~  408 (409)
T PRK10090        385 GIGGA--DGKHGLHEYLQTQVVYLQS  408 (409)
T ss_pred             cCCcc--chHHHHHHhcceEEEEEec
Confidence            99975  7999999999999998764

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=99.95  E-value=1.8e-27  Score=191.93  Aligned_cols=104  Identities=28%  Similarity=0.369  Sum_probs=96.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCC-CCCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI-PVPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~-~~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+.++||+++|||+|.+.+.++++++++|.|+||+.. ....+.+||||+|.
T Consensus       335 ~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~  414 (493)
T PTZ00381        335 SPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGN  414 (493)
T ss_pred             ChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCc
Confidence            67899999999999999999999999999999999999999999999999999999999999875 33346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|+.  +|++|++.|++.|+|+.+.
T Consensus       415 SG~G~~--~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        415 SGMGAY--HGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             cccccc--chHHHHHhccceeEEEEcc
Confidence            999975  7999999999999998774

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.95  E-value=2e-27  Score=190.78  Aligned_cols=101  Identities=21%  Similarity=0.361  Sum_probs=94.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       371 ~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  449 (472)
T TIGR03374       371 DAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFML-VSEMPHGGQKLS  449 (472)
T ss_pred             ChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccC
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|++++
T Consensus       450 G~G~~--~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       450 GYGKD--MSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             ccCcc--chHHHHHHhhceEEEEE
Confidence            99975  79999999999999875

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=2.4e-27  Score=191.33  Aligned_cols=104  Identities=26%  Similarity=0.355  Sum_probs=96.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       385 ~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~S  464 (496)
T PLN00412        385 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDS  464 (496)
T ss_pred             CHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999975443357899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|+++++.|++.|++++++
T Consensus       465 G~G~~--~g~~~~~~ft~~k~i~~~~  488 (496)
T PLN00412        465 GIGSQ--GITNSINMMTKVKSTVINL  488 (496)
T ss_pred             ccCCC--ChHHHHHHhcceEEEEEec
Confidence            99975  6999999999999998875

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.95  E-value=3.7e-27  Score=191.86  Aligned_cols=103  Identities=31%  Similarity=0.397  Sum_probs=95.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       430 ~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~-~~~~PfGG~k~S  508 (538)
T PLN02466        430 MLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVF-DAAIPFGGYKMS  508 (538)
T ss_pred             CchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCcCCCCcC
Confidence            6889999999999999999999999999999999999999999999999999999999999986433 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|++++.+
T Consensus       509 G~G~~--~G~~gl~~ft~~k~v~~~~  532 (538)
T PLN02466        509 GIGRE--KGIYSLNNYLQVKAVVTPL  532 (538)
T ss_pred             ccCcc--cHHHHHHHhcceEEEEEeC
Confidence            99975  7999999999999998754

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=99.95  E-value=2.7e-27  Score=189.49  Aligned_cols=103  Identities=30%  Similarity=0.423  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|+|+||+.+....+.+||||+|.|
T Consensus       362 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  441 (465)
T cd07151         362 MEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNS  441 (465)
T ss_pred             CchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999976443467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       442 G~G~~--~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         442 GLGRF--NGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             cCCcC--ChHHHHHHhhceEEEEec
Confidence            99975  799999999999999864

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.95  E-value=2.7e-27  Score=190.06  Aligned_cols=102  Identities=29%  Similarity=0.468  Sum_probs=95.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       375 ~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  453 (477)
T cd07113         375 SRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFL-DPAVPFGGMKQS  453 (477)
T ss_pred             ChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccc
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|+++
T Consensus       454 G~G~~--~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         454 GIGRE--FGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             cCCcc--chHHHHHHhhceEEEEEe
Confidence            99975  699999999999999865

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=99.95  E-value=3.1e-27  Score=189.77  Aligned_cols=104  Identities=30%  Similarity=0.455  Sum_probs=96.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh--cceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQE--IDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~--l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++++  +++|.|+||++.....+.+||||+|
T Consensus       372 ~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~  451 (478)
T cd07086         372 ARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEK  451 (478)
T ss_pred             ChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcc
Confidence            67899999999999999999999999999999999999999999999999999  9999999999755444678999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|++++++|++.|+|++++
T Consensus       452 ~SG~G~~--~g~~~~~~f~~~k~i~~~~  477 (478)
T cd07086         452 ETGGGRE--SGSDAWKQYMRRSTCTINY  477 (478)
T ss_pred             cccCCcc--chHHHHHHhhceEEEEEeC
Confidence            9999975  6999999999999998764

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.95  E-value=2.5e-27  Score=190.05  Aligned_cols=103  Identities=23%  Similarity=0.360  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       372 ~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  450 (475)
T PRK13473        372 DEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKQS  450 (475)
T ss_pred             ChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999997543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+++++|
T Consensus       451 G~G~~--~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        451 GYGKD--MSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             ccCcc--chHHHHHHHhceEEEEEec
Confidence            99975  6999999999999998875

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.95  E-value=3e-27  Score=189.71  Aligned_cols=105  Identities=29%  Similarity=0.388  Sum_probs=95.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|+|
T Consensus       368 ~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  447 (472)
T TIGR03250       368 MTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDS  447 (472)
T ss_pred             ChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccc
Confidence            67899999999999999999999999999999999999999999999999999999999999875443355899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|+. .+|++++++|++.|+++++|
T Consensus       448 G~G~~-~g~~~~l~~ft~~k~i~~~~  472 (472)
T TIGR03250       448 GLGYK-EGVQEAMKSFTNLKTYSLPW  472 (472)
T ss_pred             cCCCC-CChHHHHHHhhceEEEEEeC
Confidence            99953 26789999999999998753

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-27  Score=189.33  Aligned_cols=104  Identities=30%  Similarity=0.410  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ..+.+||||+|.|
T Consensus       379 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~S  457 (488)
T PRK13252        379 MTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGE-SPAEMPVGGYKQS  457 (488)
T ss_pred             ChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCC-CCCCCCCCCCccC
Confidence            678999999999999999999999999999999999999999999999999999999999998643 3457899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       458 G~G~~--~g~~~~~~ft~~k~i~~~~~  482 (488)
T PRK13252        458 GIGRE--NGIATLEHYTQIKSVQVEMG  482 (488)
T ss_pred             cCCcC--ChHHHHHHhcceEEEEEeCC
Confidence            99975  79999999999999998753

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=99.95  E-value=3e-27  Score=188.48  Aligned_cols=102  Identities=25%  Similarity=0.373  Sum_probs=94.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|+|
T Consensus       351 ~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~S  430 (452)
T cd07147         351 MEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDS  430 (452)
T ss_pred             ChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999976544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++|+++|++.|+|+|
T Consensus       431 G~G~~--~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         431 GIGRE--GVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             ccCCC--ChHHHHHHhcceeEEeC
Confidence            99976  79999999999999864

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=99.95  E-value=3.7e-27  Score=189.23  Aligned_cols=104  Identities=31%  Similarity=0.411  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh--cceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQE--IDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~--l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.+++++  +++|.|+||+.+....+.+||||+|
T Consensus       368 ~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k  447 (474)
T cd07130         368 APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEK  447 (474)
T ss_pred             CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccc
Confidence            67899999999999999999999999999999999999999999999999987  8999999998654444678999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|++++++|++.|++++++
T Consensus       448 ~SG~G~~--~g~~~~~~f~~~k~~~~~~  473 (474)
T cd07130         448 ETGGGRE--SGSDAWKQYMRRSTCTINY  473 (474)
T ss_pred             cccCCcc--chHHHHHHHhheEEEEEec
Confidence            9999975  7999999999999988764

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=99.95  E-value=4.5e-27  Score=188.87  Aligned_cols=102  Identities=29%  Similarity=0.429  Sum_probs=95.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       373 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  451 (475)
T cd07117         373 MRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQI-PAGAPFGGYKKS  451 (475)
T ss_pred             ChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccC
Confidence            5788999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++|+++|++.|+++++
T Consensus       452 G~G~~--~g~~~~~~ft~~k~v~~~  474 (475)
T cd07117         452 GIGRE--THKSMLDAYTQMKNIYID  474 (475)
T ss_pred             cCCCC--chHHHHHHHhCeEEEEEe
Confidence            99975  799999999999998864

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.95  E-value=4.2e-27  Score=189.55  Aligned_cols=102  Identities=29%  Similarity=0.404  Sum_probs=94.7

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+  |++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|
T Consensus       382 ~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k  460 (486)
T cd07140         382 MFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKT-DVAAPFGGFK  460 (486)
T ss_pred             ChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcc
Confidence            6789999999999999998  699999999999999999999999999999999999999999996543 3568999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      .||+|++  +|++++++|++.|+++++
T Consensus       461 ~SG~G~~--~G~~~l~~ft~~k~v~~~  485 (486)
T cd07140         461 QSGFGKD--LGEEALNEYLKTKTVTIE  485 (486)
T ss_pred             cCcCCCc--chHHHHHHhhcEEEEEEe
Confidence            9999975  799999999999999864

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.95  E-value=4e-27  Score=188.06  Aligned_cols=102  Identities=30%  Similarity=0.382  Sum_probs=95.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       354 ~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfgG~k~S  432 (456)
T cd07107         354 MRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRH-FLGAPFGGVKNS  432 (456)
T ss_pred             ChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987643 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       433 G~G~~--~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         433 GIGRE--ECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             cCCcC--chHHHHHHhhceEEEEEe
Confidence            99975  799999999999999864

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.95  E-value=4.4e-27  Score=189.03  Aligned_cols=102  Identities=28%  Similarity=0.421  Sum_probs=95.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       379 ~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  457 (481)
T TIGR03216       379 ARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR-DLRTPFGGSKLS  457 (481)
T ss_pred             CHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCcCCcccC
Confidence            6789999999999999999999999999999999999999999999999999999999999987544 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       458 G~G~~--~g~~~l~~f~~~k~v~~~  480 (481)
T TIGR03216       458 GIGRE--GGVHSLEFYTELTNVCIK  480 (481)
T ss_pred             cCCcC--chHHHHHHhhceEEEEEe
Confidence            99975  799999999999999864

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.95  E-value=4.8e-27  Score=189.66  Aligned_cols=102  Identities=33%  Similarity=0.419  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       394 ~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  472 (498)
T PLN02278        394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIS-TEVAPFGGVKQS  472 (498)
T ss_pred             ChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCcccC
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 356899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       473 G~G~~--~G~~~l~~ft~~k~i~~~  495 (498)
T PLN02278        473 GLGRE--GSKYGIDEYLEIKYVCLG  495 (498)
T ss_pred             cCCcc--chHHHHHHhheeEEEEEe
Confidence            99975  799999999999998764

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.95  E-value=4e-27  Score=189.29  Aligned_cols=101  Identities=38%  Similarity=0.473  Sum_probs=94.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ..+.+||||+|.|
T Consensus       380 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~S  458 (481)
T cd07141         380 MRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV-VSPQAPFGGYKMS  458 (481)
T ss_pred             ChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCCCCcccC
Confidence            678999999999999999999999999999999999999999999999999999999999998654 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|++++
T Consensus       459 G~G~~--~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         459 GNGRE--LGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             cCCcc--chHHHHHHHhheEEEEE
Confidence            99975  69999999999999875

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=99.94  E-value=6.1e-27  Score=187.88  Aligned_cols=104  Identities=32%  Similarity=0.467  Sum_probs=96.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       373 ~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~S  452 (478)
T cd07131         373 MRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKS  452 (478)
T ss_pred             ChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccc
Confidence            57899999999999999999999999999999999999999999999999999999999999976544567899999999


Q ss_pred             CCC-CCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLG-ENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G-~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+| ++  +|++++++|++.|+|++++
T Consensus       453 G~G~~~--~g~~~~~~f~~~k~i~~~~  477 (478)
T cd07131         453 GNGHRE--AGTTALDAFTEWKAVYVDY  477 (478)
T ss_pred             cCCCcC--CcHHHHHHhhheEEEEEeC
Confidence            999 64  6899999999999998764

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.94  E-value=3.8e-27  Score=188.28  Aligned_cols=102  Identities=29%  Similarity=0.326  Sum_probs=94.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       354 ~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~S  433 (455)
T cd07148         354 AKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQS  433 (455)
T ss_pred             CHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhc
Confidence            57889999999999999999999999999999999999999999999999999999999999976444456899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|++++
T Consensus       434 G~G~~--~g~~~~~~~~~~k~~~~  455 (455)
T cd07148         434 GYGTG--GIPYTMHDMTQEKMAVI  455 (455)
T ss_pred             ccCCC--chHHHHHHhhceeEEeC
Confidence            99975  79999999999998863

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=99.94  E-value=7.9e-27  Score=187.42  Aligned_cols=106  Identities=67%  Similarity=1.158  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|++.|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       372 ~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~S  451 (477)
T TIGR01722       372 MKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDS  451 (477)
T ss_pred             ChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccc
Confidence            57889999999999999999999999999999999999999999999999999999999999865444467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|+.+.+|++++++|++.|++++++
T Consensus       452 G~G~~~~~g~~~l~~~~~~k~i~~~~  477 (477)
T TIGR01722       452 FFGDHHIYGKQGTHFYTRGKTVTTRW  477 (477)
T ss_pred             cCCCCccChHHHHHHhcCeeEEEEeC
Confidence            99952236999999999999998753

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>PLN02203 aldehyde dehydrogenase

Probab=99.94  E-value=7.3e-27  Score=188.11  Aligned_cols=105  Identities=30%  Similarity=0.413  Sum_probs=96.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ...+.+||||+|.
T Consensus       340 ~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~  419 (484)
T PLN02203        340 SDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGE  419 (484)
T ss_pred             CHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCc
Confidence            678999999999999999999999999999999999999999999999999999999999998743 2335689999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||+|++  +|++++++|++.|+|+++..
T Consensus       420 SG~Gr~--~g~~~l~~ft~~k~v~~~~~  445 (484)
T PLN02203        420 SGFGRY--HGKYSFDTFSHEKAVLRRSL  445 (484)
T ss_pred             ccCCcc--ccHHHHHHhcceeEEEEcCc
Confidence            999975  69999999999999988653

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=99.94  E-value=5.8e-27  Score=186.51  Aligned_cols=101  Identities=27%  Similarity=0.347  Sum_probs=94.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       341 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~S  420 (443)
T cd07152         341 MPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGAS  420 (443)
T ss_pred             ChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999976544467899999999


Q ss_pred             CCC-CCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLG-ENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G-~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+| ++  +|++++++|++.|+++
T Consensus       421 G~G~~~--~g~~~l~~~~~~k~~~  442 (443)
T cd07152         421 GNGSRF--GGPANWEEFTQWQWVT  442 (443)
T ss_pred             cCCCcc--CcHHHHHHhhceeEEe
Confidence            999 64  6999999999999876

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=99.94  E-value=6.4e-27  Score=187.44  Aligned_cols=102  Identities=26%  Similarity=0.460  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|.++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       359 ~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  437 (462)
T PRK13968        359 MTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCAS-DARVAFGGVKKS  437 (462)
T ss_pred             ChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccc
Confidence            5788999999999999999999999999999999999999999999999999999999999987533 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|.++
T Consensus       438 G~G~~--~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        438 GFGRE--LSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             ccCcC--chHHHHHHhcceeEEEEe
Confidence            99975  699999999999999764

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=99.94  E-value=7e-27  Score=188.10  Aligned_cols=103  Identities=32%  Similarity=0.463  Sum_probs=96.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       376 ~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  454 (488)
T TIGR02299       376 MRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVR-HLPTPFGGVKAS  454 (488)
T ss_pred             CchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCccC
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 357899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|++++++
T Consensus       455 G~G~~--~g~~~~~~~~~~k~i~~~~  478 (488)
T TIGR02299       455 GIGRE--GGTYSFDFYTETKNVALAL  478 (488)
T ss_pred             cCCcc--chHHHHHHHhceEEEEEec
Confidence            99975  7999999999999999875

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=99.94  E-value=6.7e-27  Score=189.24  Aligned_cols=104  Identities=35%  Similarity=0.486  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH--hcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQ--EIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~--~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++  ++++|.|+||+......+.+||||+|
T Consensus       390 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k  469 (508)
T PLN02315        390 ADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEK  469 (508)
T ss_pred             ChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccc
Confidence            6789999999999999999999999999999999999999999999999985  79999999998655444678999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|.+++++|++.|+|++++
T Consensus       470 ~SG~G~~--~G~~~l~~ft~~k~v~~~~  495 (508)
T PLN02315        470 ATGGGRE--AGSDSWKQYMRRSTCTINY  495 (508)
T ss_pred             cccCCcc--chHHHHHHHhhEEEEEEec
Confidence            9999976  6999999999999998876

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=99.94  E-value=7.2e-27  Score=187.87  Aligned_cols=102  Identities=36%  Similarity=0.490  Sum_probs=95.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       382 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  460 (484)
T cd07144         382 MRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDS-DVGVPFGGFKMS  460 (484)
T ss_pred             CchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccC
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       461 G~G~~--~g~~~l~~~t~~k~v~~~  483 (484)
T cd07144         461 GIGRE--LGEYGLETYTQTKAVHIN  483 (484)
T ss_pred             cCCCC--chHHHHHHhhceEEEEEe
Confidence            99975  799999999999999865

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=99.94  E-value=5.6e-27  Score=186.74  Aligned_cols=100  Identities=29%  Similarity=0.468  Sum_probs=94.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       346 ~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~-~~~~pfGG~~~S  424 (446)
T cd07106         346 SRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGAL-DPDAPFGGHKQS  424 (446)
T ss_pred             CHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCC-CCCCCCCCcccc
Confidence            5788999999999999999999999999999999999999999999999999999999999997643 477899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+|+
T Consensus       425 G~G~~--~g~~~~~~~t~~k~v~  445 (446)
T cd07106         425 GIGVE--FGIEGLKEYTQTQVIN  445 (446)
T ss_pred             ccCcc--chHHHHHHhhceeEEe
Confidence            99975  7999999999999885

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.94  E-value=1.3e-26  Score=193.69  Aligned_cols=103  Identities=18%  Similarity=0.174  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+++... +..||||+|.|
T Consensus       591 ~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~-~~~PfGG~k~S  669 (718)
T PLN02418        591 AQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFS-DGARFGLGAEV  669 (718)
T ss_pred             chhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC-CCCCCCCcccc
Confidence            68999999999999999999999999999999999999999999999999999999999999976543 56799999999


Q ss_pred             CC--CCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FL--GENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~--G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+  |+++.+|++|+++|++.|+|.+
T Consensus       670 G~stGr~~~~G~~gl~~~t~~K~v~~  695 (718)
T PLN02418        670 GISTGRIHARGPVGVEGLLTTRWILR  695 (718)
T ss_pred             cccCCcCCCCCHHHHHHHhcEEEEEE
Confidence            99  8765569999999999999986

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.94  E-value=9.7e-27  Score=185.95  Aligned_cols=104  Identities=32%  Similarity=0.433  Sum_probs=96.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.
T Consensus       324 ~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~  403 (449)
T cd07136         324 DPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGN  403 (449)
T ss_pred             ChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCc
Confidence            6789999999999999999999999999999999999999999999999999999999999986532 336789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|++  +|++++++|++.|+|+++.
T Consensus       404 SG~G~~--~g~~~l~~~t~~k~v~~~~  428 (449)
T cd07136         404 SGMGSY--HGKYSFDTFSHKKSILKKS  428 (449)
T ss_pred             ccCCcc--cCHHHHHHhccceEEEEcC
Confidence            999986  6999999999999999874

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=99.94  E-value=6.6e-27  Score=186.76  Aligned_cols=101  Identities=34%  Similarity=0.542  Sum_probs=93.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC--CCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV--PLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~--~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+....  ..+.+||||+|
T Consensus       351 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k  430 (454)
T cd07101         351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMK  430 (454)
T ss_pred             CHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCccc
Confidence            5789999999999999999999999999999999999999999999999999999999999986432  33568999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      .||+|++  +|++++++|++.|+++
T Consensus       431 ~SG~G~~--~g~~~~~~~~~~k~v~  453 (454)
T cd07101         431 DSGLGRR--HGAEGLLKYTETQTVA  453 (454)
T ss_pred             ccccCcc--chHHHHHHhcceEEEe
Confidence            9999976  7999999999999886

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.94  E-value=9.2e-27  Score=187.87  Aligned_cols=102  Identities=28%  Similarity=0.378  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       391 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  469 (494)
T PRK09847        391 ASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG-DMTVPFGGYKQS  469 (494)
T ss_pred             ChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccc
Confidence            5789999999999999999999999999999999999999999999999999999999999996543 357899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|.++
T Consensus       470 G~G~~--~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        470 GNGRD--KSLHALEKFTELKTIWIS  492 (494)
T ss_pred             ccCcc--chHHHHHHhhceEEEEEe
Confidence            99975  799999999999998764

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.94  E-value=9.2e-27  Score=185.72  Aligned_cols=105  Identities=30%  Similarity=0.396  Sum_probs=96.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.
T Consensus       324 ~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~  403 (443)
T cd07132         324 DPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGN  403 (443)
T ss_pred             ChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCc
Confidence            6789999999999999999999999999999999999999999999999999999999999987533 235689999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||+|++  +|++++++|++.|++++++.
T Consensus       404 SG~G~~--~g~~~l~~~~~~k~v~~~~~  429 (443)
T cd07132         404 SGMGAY--HGKYSFDTFSHKRSCLVKSL  429 (443)
T ss_pred             ccCCCc--ccHHHHHHhccccEEEEccc
Confidence            999976  69999999999999987753

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=99.94  E-value=8.4e-27  Score=187.04  Aligned_cols=101  Identities=35%  Similarity=0.554  Sum_probs=94.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       371 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~S  450 (473)
T cd07097         371 MRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGS  450 (473)
T ss_pred             ChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999876544467899999999


Q ss_pred             CCC-CCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLG-ENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G-~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+| ++  +|++++++|++.|+|.
T Consensus       451 G~G~~~--~g~~~l~~f~~~k~v~  472 (473)
T cd07097         451 SYGPRE--QGEAALEFYTTIKTVY  472 (473)
T ss_pred             cCcccC--CcHHHHHHhhceeEEe
Confidence            999 65  6999999999999885

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=99.94  E-value=9.6e-27  Score=186.87  Aligned_cols=100  Identities=32%  Similarity=0.433  Sum_probs=93.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++.++++++++|.|+||+... ..+.+||||+|.|
T Consensus       376 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~S  454 (476)
T cd07142         376 MKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDV-FDASIPFGGYKMS  454 (476)
T ss_pred             ChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccC
Confidence            678999999999999999999999999999999999999999999999999999999999998654 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       455 G~G~~--~g~~~~~~ft~~k~v~  475 (476)
T cd07142         455 GIGRE--KGIYALNNYLQVKAVV  475 (476)
T ss_pred             cCCcc--chHHHHHHhhheeEEe
Confidence            99975  7999999999999875

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=99.94  E-value=1.1e-26  Score=185.11  Aligned_cols=100  Identities=27%  Similarity=0.423  Sum_probs=93.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|.++|||+++|||+|.+++.++++++++|.|+||++... .+..||||+|.|
T Consensus       352 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfgG~k~S  430 (452)
T cd07102         352 MRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYL-DPALAWTGVKDS  430 (452)
T ss_pred             ChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCC-CCCCCCCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987643 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       431 G~G~~--~g~~~~~~~~~~k~~~  451 (452)
T cd07102         431 GRGVT--LSRLGYDQLTRPKSYH  451 (452)
T ss_pred             ccCcc--chHHHHHHHhceeEEe
Confidence            99975  7999999999999886

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=99.94  E-value=9.9e-27  Score=185.35  Aligned_cols=101  Identities=32%  Similarity=0.494  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       350 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~S  429 (451)
T cd07150         350 MRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKAS  429 (451)
T ss_pred             CHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCcccc
Confidence            56899999999999999999999999999999999999999999999999999999999999986544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       430 G~G~~--~g~~~l~~~~~~k~v~  450 (451)
T cd07150         430 GFGRE--GGEWSMEEFTELKWIT  450 (451)
T ss_pred             ccCcC--CcHHHHHHhheeeEEe
Confidence            99975  7999999999999886

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=99.94  E-value=1.3e-26  Score=184.98  Aligned_cols=102  Identities=33%  Similarity=0.430  Sum_probs=94.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|++++||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       355 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~S  434 (456)
T cd07145         355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKS  434 (456)
T ss_pred             ChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence            57899999999999999999999999999999999999999999999999999999999999876444457899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|+.  +|++|+++|++.|+|++
T Consensus       435 G~G~~--~g~~~l~~f~~~k~v~~  456 (456)
T cd07145         435 GIGRE--GVRYTMLEMTEEKTIVI  456 (456)
T ss_pred             cCCcC--chHHHHHHhhceeEEeC
Confidence            99975  79999999999999863

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=99.94  E-value=1.2e-26  Score=185.67  Aligned_cols=101  Identities=31%  Similarity=0.353  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|.++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       355 ~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~S  433 (455)
T cd07120         355 ADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKL-FAEAEEGGYRQS  433 (455)
T ss_pred             ChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999997644 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|++++
T Consensus       434 G~G~~--~g~~~l~~ft~~k~v~~  455 (455)
T cd07120         434 GLGRL--HGVAALEDFIEYKHIYL  455 (455)
T ss_pred             ccCcc--chHHHHHHHhceeEEeC
Confidence            99975  69999999999999863

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=99.94  E-value=1.6e-26  Score=187.02  Aligned_cols=104  Identities=28%  Similarity=0.418  Sum_probs=95.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||+..... .+.+||||+|+
T Consensus       407 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~  486 (512)
T cd07124         407 HRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKM  486 (512)
T ss_pred             ChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999875332 34689999999


Q ss_pred             CCCC-CCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLG-ENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G-~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+| ++  +|++++++|++.|+++++|
T Consensus       487 SG~G~~~--~g~~~~~~~t~~k~v~~~~  512 (512)
T cd07124         487 SGTGSKA--GGPDYLLQFMQPKTVTENF  512 (512)
T ss_pred             ccCCCcc--CcHHHHHHhccEEEEEEeC
Confidence            9999 54  6899999999999998874

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.94  E-value=1.7e-26  Score=184.83  Aligned_cols=101  Identities=33%  Similarity=0.505  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       356 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  434 (457)
T PRK09406        356 MRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVS-YPELPFGGVKRS  434 (457)
T ss_pred             CHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|+|++
T Consensus       435 G~G~~--~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        435 GYGRE--LSAHGIREFCNIKTVWI  456 (457)
T ss_pred             ccCcc--chHHHHHHhhceEEEEe
Confidence            99976  69999999999999864

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=99.94  E-value=1.9e-26  Score=184.21  Aligned_cols=103  Identities=31%  Similarity=0.414  Sum_probs=95.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       354 ~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~S  432 (457)
T cd07090         354 MTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNIS-PVEVPFGGYKQS  432 (457)
T ss_pred             ChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCCccC
Confidence            5788999999999999999999999999999999999999999999999999999999999987543 356899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|++++++
T Consensus       433 G~G~~--~g~~~~~~f~~~k~~~~~~  456 (457)
T cd07090         433 GFGRE--NGTAALEHYTQLKTVYVEM  456 (457)
T ss_pred             cCCcc--chHHHHHHHhCeEEEEEeC
Confidence            99975  7999999999999998753

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=99.94  E-value=1.7e-26  Score=182.98  Aligned_cols=101  Identities=31%  Similarity=0.430  Sum_probs=94.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|++++||+++|||+|.+++.++++++++|.|+||++.....+.+||||+|.|
T Consensus       330 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~S  409 (431)
T cd07104         330 MPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKAS  409 (431)
T ss_pred             ChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccc
Confidence            56889999999999999999999999999999999999999999999999999999999999986544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       410 G~g~~--~g~~~l~~~~~~k~~~  430 (431)
T cd07104         410 GGGRF--GGPASLEEFTEWQWIT  430 (431)
T ss_pred             cCCcc--chHHHHHHhhceeEEe
Confidence            99975  7999999999999875

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=99.94  E-value=2.6e-26  Score=186.76  Aligned_cols=116  Identities=22%  Similarity=0.340  Sum_probs=101.8

Q ss_pred             CCccccCcccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHHhcc--eeeEEEcCCCCCC-CCCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDT--LDEAISII-NKNPYGNGTAIFTNNGATARKFSQEID--CGQVGINVPIPVP-LSMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~--~~eai~~~-n~~~~gl~~~vft~d~~~~~~~~~~l~--ag~v~VN~~~~~~-~~~~pf   74 (124)
                      |+|++||+||||++|++|+|  ++||++++ |+++|||+++|||+|.+++.+++++++  +|.|+||+..... .+.+||
T Consensus       411 ~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~Pf  490 (533)
T TIGR01236       411 DPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPF  490 (533)
T ss_pred             ChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCC
Confidence            68899999999999999998  59999999 889999999999999999999999977  9999999864332 357899


Q ss_pred             CCccCCCCC-CCCcCcHHHHHhcceeeEEEEeccCccccccccccCCCCCC
Q psy10611         75 TGSRGSFLG-ENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVMQ  124 (124)
Q Consensus        75 gG~~~SG~G-~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~  124 (124)
                      ||+|.||+| ++  +|.+++++|++.|++++...      ++-+.+||+|.
T Consensus       491 GG~k~SG~G~~~--~g~~~l~~f~~~k~v~~~~~------~~~~~~~~~~~  533 (533)
T TIGR01236       491 GGARGSGTNDKA--GGPLNLLRWTSARSIKETFV------PLTDWSYPHMA  533 (533)
T ss_pred             CCcccccCCccc--CCHHHHHHhcceEEEEEEcc------ccccccCcccC
Confidence            999999998 64  79999999999999987652      45677788874

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=99.94  E-value=2.1e-26  Score=186.34  Aligned_cols=105  Identities=26%  Similarity=0.365  Sum_probs=95.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+..... .+.+||||+|.
T Consensus       406 ~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~  485 (511)
T TIGR01237       406 ARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKM  485 (511)
T ss_pred             ChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999875432 34589999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|+. .+|++++++|++.|+++.+|
T Consensus       486 SG~G~~-~~g~~~l~~~~~~k~v~~~~  511 (511)
T TIGR01237       486 SGTDSK-AGGPDYLLQFMQPKTVTENI  511 (511)
T ss_pred             ccCCCc-CCCHHHHHHhcceEEEEEeC
Confidence            999952 37999999999999998764

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=99.94  E-value=1.8e-26  Score=185.44  Aligned_cols=103  Identities=35%  Similarity=0.511  Sum_probs=96.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ..+.+||||+|.|
T Consensus       372 ~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~S  450 (482)
T cd07119         372 MRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP-YFAEAPWGGYKQS  450 (482)
T ss_pred             ChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccC
Confidence            578999999999999999999999999999999999999999999999999999999999998643 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++|+++|++.|++++++
T Consensus       451 G~G~~--~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         451 GIGRE--LGPTGLEEYQETKHININL  474 (482)
T ss_pred             cCCcc--chHHHHHHHhceEEEEEec
Confidence            99975  6999999999999999875

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.94  E-value=1.6e-26  Score=184.12  Aligned_cols=101  Identities=35%  Similarity=0.449  Sum_probs=94.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|..++||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       352 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~S  431 (453)
T cd07149         352 MKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKES  431 (453)
T ss_pred             CHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCcccc
Confidence            56889999999999999999999999999999999999999999999999999999999999976544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++|+++|++.|+++
T Consensus       432 G~G~~--~g~~~~~~~~~~k~~~  452 (453)
T cd07149         432 GTGRE--GPRYAIEEMTEIKLVC  452 (453)
T ss_pred             ccCCC--ChHHHHHHhhceeEEe
Confidence            99975  7999999999999885

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.94  E-value=1.6e-26  Score=183.50  Aligned_cols=102  Identities=35%  Similarity=0.455  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|.|||++++|+.+|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       331 ~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~S  410 (432)
T cd07105         331 MDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSS  410 (432)
T ss_pred             CHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999976544467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|+|++
T Consensus       411 G~G~~--~g~~~l~~~~~~k~v~~  432 (432)
T cd07105         411 GYGRF--NGKWGIDEFTETKWITI  432 (432)
T ss_pred             ccccc--ChHHHHHHhhceEEEeC
Confidence            99975  79999999999998863

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=99.94  E-value=1.8e-26  Score=184.17  Aligned_cols=101  Identities=34%  Similarity=0.466  Sum_probs=94.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       353 ~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~S  432 (454)
T cd07109         353 SRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKS  432 (454)
T ss_pred             ChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccC
Confidence            67899999999999999999999999999999999999999999999999999999999999976333467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       433 G~G~~--~g~~~~~~f~~~k~i~  453 (454)
T cd07109         433 GHGRE--KGLEALYNYTQTKTVA  453 (454)
T ss_pred             cCCcc--chHHHHHHHhceeEEe
Confidence            99975  6999999999999886

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=99.94  E-value=2.5e-26  Score=184.85  Aligned_cols=102  Identities=34%  Similarity=0.470  Sum_probs=95.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|.++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       379 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  457 (481)
T cd07143         379 MKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLL-HHQVPFGGYKQS  457 (481)
T ss_pred             ChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999997543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+++++
T Consensus       458 G~G~~--~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         458 GIGRE--LGEYALENYTQIKAVHIN  480 (481)
T ss_pred             ccCcc--cHHHHHHHHhCeEEEEEe
Confidence            99975  799999999999999864

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.94  E-value=1.5e-26  Score=184.43  Aligned_cols=97  Identities=33%  Similarity=0.443  Sum_probs=90.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       352 ~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~S  430 (448)
T TIGR01780       352 MLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLIS-NVVAPFGGVKQS  430 (448)
T ss_pred             ChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCC-CCCCCCCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999997543 456899999999


Q ss_pred             CCCCCCcCcHHHHHhcceee
Q psy10611         81 FLGENHFYGKQGFYFYTETK  100 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k  100 (124)
                      |+|++  +|++++++|++.|
T Consensus       431 G~G~~--~g~~~~~~~~~~k  448 (448)
T TIGR01780       431 GLGRE--GSKYGIEEYLETK  448 (448)
T ss_pred             cCCcc--chHHHHHHHhccC
Confidence            99976  6999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=99.94  E-value=2.9e-26  Score=182.94  Aligned_cols=102  Identities=29%  Similarity=0.416  Sum_probs=95.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|..+|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       351 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~S  429 (453)
T cd07115         351 MRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRF-DPGSPFGGYKQS  429 (453)
T ss_pred             ChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCCCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|+.  +|++++++|++.|+++++
T Consensus       430 G~G~~--~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         430 GFGRE--MGREALDEYTEVKSVWVN  452 (453)
T ss_pred             cCCcC--chHHHHHHhhceEEEEEe
Confidence            99975  799999999999999764

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.94  E-value=1.7e-26  Score=183.74  Aligned_cols=101  Identities=32%  Similarity=0.473  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.
T Consensus       330 ~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~  409 (432)
T cd07137         330 SSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGE  409 (432)
T ss_pred             chhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCc
Confidence            6789999999999999999999999999999999999999999999999999999999999986532 336789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||+|++  +|.+++++|++.|+|+
T Consensus       410 SG~G~~--~g~~~l~~f~~~k~v~  431 (432)
T cd07137         410 SGFGAY--HGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CcCCcc--ccHHHHHHhccCceee
Confidence            999976  6999999999999875

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=99.94  E-value=2.3e-26  Score=183.70  Aligned_cols=101  Identities=31%  Similarity=0.432  Sum_probs=93.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       349 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  428 (451)
T cd07146         349 AELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDS  428 (451)
T ss_pred             CHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCccccc
Confidence            57899999999999999999999999999999999999999999999999999999999999975544467899999999


Q ss_pred             CC-CCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FL-GENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~-G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+ |++  +|++|+++|++.|+++
T Consensus       429 G~~g~~--~g~~~~~~f~~~k~~~  450 (451)
T cd07146         429 GLGGKE--GVREAMKEMTNVKTYS  450 (451)
T ss_pred             CCCccc--ChHHHHHHHhceeEEe
Confidence            95 765  7899999999999875

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=99.94  E-value=2.6e-26  Score=182.67  Aligned_cols=101  Identities=36%  Similarity=0.518  Sum_probs=93.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ...+.+||||+|.
T Consensus       332 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~  411 (434)
T cd07133         332 MRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGA  411 (434)
T ss_pred             CcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCc
Confidence            678999999999999999999999999999999999999999999999999999999999998752 2336789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||+|++  +|++++++|++.|+|+
T Consensus       412 SG~G~~--~g~~~~~~ft~~k~v~  433 (434)
T cd07133         412 SGMGAY--HGKEGFLTFSHAKPVF  433 (434)
T ss_pred             ccCCCc--CCHHHHHHhcccceec
Confidence            999976  6999999999999874

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.94  E-value=3.1e-26  Score=185.94  Aligned_cols=104  Identities=31%  Similarity=0.494  Sum_probs=95.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC--CCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV--PLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~--~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+....  ..+.+||||+|
T Consensus       387 ~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k  466 (524)
T PRK09407        387 MELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMK  466 (524)
T ss_pred             ChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCcc
Confidence            6789999999999999999999999999999999999999999999999999999999999986432  23467999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|++++++|++.|+|++++
T Consensus       467 ~SG~G~~--~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        467 DSGLGRR--HGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             ccccCcc--chHHHHHHhCCeEEEEEcc
Confidence            9999976  6999999999999998875

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=99.94  E-value=2.3e-26  Score=184.25  Aligned_cols=99  Identities=32%  Similarity=0.459  Sum_probs=93.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|++++||+++|||+|.+++.++++++++|.|+||+..  ..+.+||||+|.|
T Consensus       372 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~S  449 (471)
T cd07139         372 MRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQS  449 (471)
T ss_pred             chHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999875  3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       450 G~G~~--~g~~~~~~ft~~k~i~  470 (471)
T cd07139         450 GIGRE--GGPEGLDAYLETKSIY  470 (471)
T ss_pred             cCCcc--chHHHHHHHhceeEEe
Confidence            99975  7999999999999986

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=99.94  E-value=3.6e-26  Score=182.93  Aligned_cols=103  Identities=32%  Similarity=0.508  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCC-CCCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI-PVPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~-~~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+|||++++|.++|||+++|||+|.+++.++++++++|.|+||+.. ....+.+||||+|.
T Consensus       361 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~  440 (465)
T cd07098         361 MKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKG  440 (465)
T ss_pred             CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCcccc
Confidence            56889999999999999999999999999999999999999999999999999999999999864 33346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      ||+|++  +|++++++|++.|+++++
T Consensus       441 SG~G~~--~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         441 SGFGRF--AGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             ccCCcc--ChHHHHHHhheeEEEEEe
Confidence            999975  799999999999999763

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.94  E-value=5.8e-26  Score=182.72  Aligned_cols=103  Identities=25%  Similarity=0.302  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       367 ~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~S  446 (484)
T TIGR03240       367 AELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGAS  446 (484)
T ss_pred             CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccc
Confidence            57899999999999999999999999999999999999999999999999999999999999875444467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  .|..+++ |++.|++++++
T Consensus       447 G~g~~--~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       447 GNHRP--SAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             cCCCC--CchHHHh-heeeeEEEEec
Confidence            99986  5766655 99999999986

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=99.94  E-value=3.2e-26  Score=181.78  Aligned_cols=100  Identities=32%  Similarity=0.539  Sum_probs=93.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       329 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfGG~~~S  407 (429)
T cd07100         329 MPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKS-DPRLPFGGVKRS  407 (429)
T ss_pred             CHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999997643 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       408 G~G~~--~g~~~l~~~~~~k~v~  428 (429)
T cd07100         408 GYGRE--LGRFGIREFVNIKTVW  428 (429)
T ss_pred             ccCCc--chHHHHHHhcceeEEe
Confidence            99976  6999999999999875

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=99.94  E-value=3.6e-26  Score=182.56  Aligned_cols=100  Identities=31%  Similarity=0.547  Sum_probs=93.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       356 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  434 (456)
T cd07110         356 SRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPC-FPQAPWGGYKRS  434 (456)
T ss_pred             ChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       435 G~G~~--~g~~~l~~~~~~k~i~  455 (456)
T cd07110         435 GIGRE--LGEWGLDNYLEVKQIT  455 (456)
T ss_pred             cCCcc--chHHHHHHhcceeEEe
Confidence            99975  6999999999999875

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=99.94  E-value=3.4e-26  Score=183.60  Aligned_cols=100  Identities=36%  Similarity=0.501  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|++++||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       376 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~k~S  454 (476)
T cd07091         376 MKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVF-DAAVPFGGFKQS  454 (476)
T ss_pred             ChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccC
Confidence            5789999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       455 G~G~~--~g~~~~~~f~~~k~~~  475 (476)
T cd07091         455 GFGRE--LGEEGLEEYTQVKAVT  475 (476)
T ss_pred             cCCcc--chHHHHHHhhceeEEe
Confidence            99975  7999999999999886

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=99.94  E-value=4.5e-26  Score=181.71  Aligned_cols=101  Identities=30%  Similarity=0.517  Sum_probs=93.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+... ...+.+||||+|.
T Consensus       351 ~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~  430 (453)
T cd07099         351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKD  430 (453)
T ss_pred             CHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCccc
Confidence            578999999999999999999999999999999999999999999999999999999999999753 3346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||.|++  +|++++++|++.|+++
T Consensus       431 SG~g~~--~g~~~~~~~t~~k~v~  452 (453)
T cd07099         431 SGGGRR--HGAEGLREFCRPKAIA  452 (453)
T ss_pred             ccCCcc--ChHHHHHHhcceEEEe
Confidence            999975  7999999999999876

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.94  E-value=2.3e-26  Score=182.33  Aligned_cols=103  Identities=26%  Similarity=0.244  Sum_probs=95.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.... +..||||.+.|
T Consensus       306 ~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~-~~~p~G~~~~s  384 (417)
T PRK00197        306 EEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFT-DGGEFGLGAEI  384 (417)
T ss_pred             cchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccC-CCCccccchhh
Confidence            67899999999999999999999999999999999999999999999999999999999999875443 46799999999


Q ss_pred             CCC----CCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLG----ENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G----~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |.|    ++  +|++++++|++.|+++++.
T Consensus       385 G~g~~~~~~--~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        385 GISTQKLHA--RGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             eeecCCCcC--CCccchHhhcEEEEEEECC
Confidence            998    75  6999999999999998754

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=99.94  E-value=7.3e-26  Score=182.30  Aligned_cols=103  Identities=24%  Similarity=0.292  Sum_probs=93.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       369 ~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  448 (487)
T PRK09457        369 AELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGAS  448 (487)
T ss_pred             ChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999875444457899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|..+ .+|++.|++++++
T Consensus       449 G~G~~--~g~~~-~~~~~~k~~~~~~  471 (487)
T PRK09457        449 GNHRP--SAYYA-ADYCAYPMASLES  471 (487)
T ss_pred             cCCCC--CchhH-hhheeeeEEEEec
Confidence            99986  57545 5599999999886

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.94  E-value=4.7e-26  Score=182.58  Aligned_cols=102  Identities=32%  Similarity=0.457  Sum_probs=94.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       371 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~S  450 (473)
T cd07082         371 MRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDS  450 (473)
T ss_pred             CHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccc
Confidence            56889999999999999999999999999999999999999999999999999999999999976443356899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++|+++|++.|++++
T Consensus       451 G~g~~--~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         451 GIGTQ--GIGDALRSMTRRKGIVI  472 (473)
T ss_pred             ccCCC--ChHHHHHHhhceeEEEE
Confidence            99976  69999999999999875

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>PLN02467 betaine aldehyde dehydrogenase

Probab=99.93  E-value=6.1e-26  Score=183.50  Aligned_cols=103  Identities=33%  Similarity=0.515  Sum_probs=96.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ...+||||+|.|
T Consensus       387 ~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  465 (503)
T PLN02467        387 MQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPC-FCQAPWGGIKRS  465 (503)
T ss_pred             ChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccC
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 457899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|++++.+
T Consensus       466 G~G~~--~G~~~l~~ft~~k~i~~~~  489 (503)
T PLN02467        466 GFGRE--LGEWGLENYLSVKQVTKYI  489 (503)
T ss_pred             cCCCc--chHHHHHHhhCeEEEEEec
Confidence            99975  7999999999999999864

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=99.93  E-value=3.7e-26  Score=182.81  Aligned_cols=100  Identities=35%  Similarity=0.498  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|.++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|+|
T Consensus       359 ~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~-~~~~PfgG~k~S  437 (459)
T cd07089         359 MRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGY-GPDAPFGGYKQS  437 (459)
T ss_pred             CHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999987643 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+|+
T Consensus       438 G~G~~--~g~~~l~~ft~~k~v~  458 (459)
T cd07089         438 GLGRE--NGIEGLEEFLETKSIA  458 (459)
T ss_pred             cCCCC--chHHHHHHhhceeEEe
Confidence            99975  6999999999999876

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=99.93  E-value=4.8e-26  Score=182.28  Aligned_cols=100  Identities=30%  Similarity=0.411  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       362 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfgG~k~S  440 (462)
T cd07112         362 MRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEG-DITTPFGGFKQS  440 (462)
T ss_pred             ChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|++.
T Consensus       441 G~G~~--~g~~~~~~f~~~k~i~  461 (462)
T cd07112         441 GNGRD--KSLHALDKYTELKTTW  461 (462)
T ss_pred             cCCcc--chHHHHHHHhceeEEE
Confidence            99975  7999999999999875

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.93  E-value=8.1e-26  Score=183.26  Aligned_cols=106  Identities=25%  Similarity=0.297  Sum_probs=96.6

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~   77 (124)
                      |++++||+||||++|++|+  |+||||+++|.++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+
T Consensus       401 ~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~  480 (518)
T cd07125         401 IFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGW  480 (518)
T ss_pred             ChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCc
Confidence            6789999999999999999  999999999999999999999999999999999999999999997543 3356899999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |.||+|+. .+|+++++.|++.|++++++.
T Consensus       481 ~~SG~G~~-~gg~~~~~~ft~~k~i~~~~~  509 (518)
T cd07125         481 GLSGTGPK-AGGPNYLLRFGNEKTVSLNTT  509 (518)
T ss_pred             ccccCCcc-cccHHHHHHhcceEEEEEEcc
Confidence            99999952 268999999999999998764

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=99.93  E-value=7e-26  Score=180.44  Aligned_cols=100  Identities=31%  Similarity=0.454  Sum_probs=93.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+.+|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       350 ~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfgG~~~S  428 (450)
T cd07092         350 DEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPL-AAEMPHGGFKQS  428 (450)
T ss_pred             ChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCcCCcccC
Confidence            5789999999999999999999999999999999999999999999999999999999999987654 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       429 G~G~~--~g~~~~~~~~~~k~~~  449 (450)
T cd07092         429 GYGKD--LSIYALEDYTRIKHVM  449 (450)
T ss_pred             cCCCC--ChHHHHHHHheeeEEe
Confidence            99975  6999999999999885

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=99.93  E-value=8.1e-26  Score=180.94  Aligned_cols=100  Identities=37%  Similarity=0.455  Sum_probs=92.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||+..... ...||||+|.|
T Consensus       368 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~k~S  446 (468)
T cd07088         368 MEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEA-MQGFHAGWKKS  446 (468)
T ss_pred             CchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999876432 45699999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|++.
T Consensus       447 G~G~~--~g~~~l~~~t~~k~v~  467 (468)
T cd07088         447 GLGGA--DGKHGLEEYLQTKVVY  467 (468)
T ss_pred             cCCcC--chHHHHHHHhceeEEe
Confidence            99975  7999999999999885

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=99.93  E-value=7.1e-26  Score=180.87  Aligned_cols=100  Identities=33%  Similarity=0.505  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+.+.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       357 ~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~k~S  435 (457)
T cd07114         357 MRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRAL-SPSSPFGGFKDS  435 (457)
T ss_pred             ChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCCCCccC
Confidence            5789999999999999999999999999999999999999999999999999999999999986543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |.|++  +|++++++|++.|+++
T Consensus       436 G~G~~--~g~~~~~~f~~~k~~~  456 (457)
T cd07114         436 GIGRE--NGIEAIREYTQTKSVW  456 (457)
T ss_pred             cCCcc--chHHHHHHHhceeEEe
Confidence            99975  7999999999999886

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=99.93  E-value=7.1e-26  Score=180.96  Aligned_cols=100  Identities=38%  Similarity=0.543  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|.++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       354 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfgG~~~S  432 (454)
T cd07118         354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDG-SPELPFGGFKQS  432 (454)
T ss_pred             CHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccc
Confidence            5788999999999999999999999999999999999999999999999999999999999997653 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       433 G~G~~--~g~~~l~~~t~~k~~~  453 (454)
T cd07118         433 GIGRE--LGRYGVEEYTELKTVH  453 (454)
T ss_pred             cCCcC--chHHHHHHHhceeEEe
Confidence            99975  7999999999999875

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=1e-25  Score=182.54  Aligned_cols=105  Identities=26%  Similarity=0.392  Sum_probs=94.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|++||++++|.++|||+++|||+|.+++.++++++++|+|+||+.... ..+.+||||+|.
T Consensus       409 ~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~  488 (514)
T PRK03137        409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNM  488 (514)
T ss_pred             CHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCccc
Confidence            6789999999999999999999999999999999999999999999999999999999999986433 234589999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|+. .+|++++++|++.|+|++++
T Consensus       489 SG~G~~-~gg~~~l~~ft~~k~v~~~~  514 (514)
T PRK03137        489 SGTDSK-AGGPDYLLLFLQAKTVSEMF  514 (514)
T ss_pred             ccCCcc-cCCHHHHHHhceEEEEEEeC
Confidence            999941 27999999999999988653

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=99.93  E-value=6.6e-26  Score=181.06  Aligned_cols=100  Identities=29%  Similarity=0.413  Sum_probs=92.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||++... .+.+||||.|.|
T Consensus       356 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~pfGG~k~S  434 (457)
T cd07108         356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQ-QPGQSYGGFKQS  434 (457)
T ss_pred             ChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccC
Confidence            5788999999999999999999999999999999999999999999999999999999999998543 467899999999


Q ss_pred             CCCCCCcCcHHH-HHhcceeeEEE
Q psy10611         81 FLGENHFYGKQG-FYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~-l~~~~~~k~v~  103 (124)
                      |+|++  +|.++ +++|++.|+++
T Consensus       435 G~G~~--~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         435 GLGRE--ASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             cCCCC--ccchhHHHHhhceEEEe
Confidence            99976  57755 79999999886

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=99.93  E-value=8.9e-26  Score=179.59  Aligned_cols=101  Identities=32%  Similarity=0.442  Sum_probs=93.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|+
T Consensus       331 ~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~  410 (433)
T cd07134         331 MKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNN  410 (433)
T ss_pred             cHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCc
Confidence            5788999999999999999999999999999999999999999999999999999999999987532 335789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||.|++  +|++++++|++.|++.
T Consensus       411 SG~G~~--~g~~~l~~~~~~k~i~  432 (433)
T cd07134         411 SGIGSY--HGVYGFKAFSHERAVL  432 (433)
T ss_pred             ccCCCc--CcHHHHHHhcccceee
Confidence            999976  7999999999999874

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=99.93  E-value=7.8e-26  Score=181.15  Aligned_cols=97  Identities=35%  Similarity=0.513  Sum_probs=90.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|+|
T Consensus       371 ~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~S  449 (467)
T TIGR01804       371 MTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPY-PAEAPWGGYKQS  449 (467)
T ss_pred             ChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccC
Confidence            5788999999999999999999999999999999999999999999999999999999999987543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceee
Q psy10611         81 FLGENHFYGKQGFYFYTETK  100 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k  100 (124)
                      |+|++  +|++++++|++.|
T Consensus       450 G~G~~--~g~~~~~~~~~~~  467 (467)
T TIGR01804       450 GIGRE--NGKAGLAEYTEVK  467 (467)
T ss_pred             ccCCC--ChHHHHHHHhccC
Confidence            99976  6999999999865

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.93  E-value=4.5e-26  Score=180.11  Aligned_cols=101  Identities=28%  Similarity=0.276  Sum_probs=93.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.... +..||||.+.|
T Consensus       300 ~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~-~~~pfg~~~~s  378 (406)
T cd07079         300 EEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFT-DGGEFGLGAEI  378 (406)
T ss_pred             cchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCccc-CCCccccceee
Confidence            68999999999999999999999999999999999999999999999999999999999999976543 46799999999


Q ss_pred             CC----CCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FL----GENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~----G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |.    |++  +|++++++|++.|+++.
T Consensus       379 G~~~~~g~~--~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         379 GISTQKLHA--RGPMGLEELTTYKYIVR  404 (406)
T ss_pred             eeecCCCcC--CCCcChHHhcEEEEEEe
Confidence            88    664  69999999999998864

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.93  E-value=1e-25  Score=178.86  Aligned_cols=101  Identities=34%  Similarity=0.491  Sum_probs=93.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++++|.|+||+... ...+.+||||+|.
T Consensus       324 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~  403 (426)
T cd07087         324 SPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGN  403 (426)
T ss_pred             CHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCc
Confidence            578999999999999999999999999999999999999999999999999999999999998753 2346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||+|++  +|++++++|++.|+++
T Consensus       404 SG~G~~--~g~~~l~~~~~~k~~~  425 (426)
T cd07087         404 SGMGAY--HGKAGFDTFSHLKSVL  425 (426)
T ss_pred             ccCCCc--cCHHHHHHhccceeec
Confidence            999986  6999999999999874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=99.93  E-value=7.6e-26  Score=180.19  Aligned_cols=101  Identities=34%  Similarity=0.421  Sum_probs=93.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.
T Consensus       334 ~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~  413 (436)
T cd07135         334 DSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGD  413 (436)
T ss_pred             cHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCc
Confidence            5788999999999999999999999999999999999999999999999999999999999986533 346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      ||+|++  +|++++++|++.|++.
T Consensus       414 SG~G~~--~g~~~l~~~t~~k~i~  435 (436)
T cd07135         414 SGYGAY--HGKYGFDTFTHERTVV  435 (436)
T ss_pred             ccCCcc--ccHhHHHHhccccccc
Confidence            999976  7999999999999864

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=99.93  E-value=9.7e-26  Score=181.43  Aligned_cols=98  Identities=35%  Similarity=0.494  Sum_probs=91.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       380 ~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~S  458 (480)
T cd07111         380 SRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLF-DAAAGFGGYRES  458 (480)
T ss_pred             ChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCC-CCCCCcCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 356899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeE
Q psy10611         81 FLGENHFYGKQGFYFYTETKT  101 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~  101 (124)
                      |+|++  +|++++++|++.|+
T Consensus       459 G~G~~--~g~~~~~~~~~~k~  477 (480)
T cd07111         459 GFGRE--GGKEGLYEYLRPSW  477 (480)
T ss_pred             cCCcc--chHHHHHHHhhccC
Confidence            99975  79999999999884

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=99.93  E-value=2.9e-26  Score=183.33  Aligned_cols=100  Identities=35%  Similarity=0.566  Sum_probs=91.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+.+|||+++|||+|.+++.++++++++|+|+||+........+||||+|.|
T Consensus       363 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~S  442 (462)
T PF00171_consen  363 MPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQS  442 (462)
T ss_dssp             SHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGG
T ss_pred             ccccccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999986554444799999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTV  102 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v  102 (124)
                      |+|++  +|.+++++|++.|+|
T Consensus       443 G~G~~--~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  443 GIGRE--GGPEGLDEFTQIKTV  462 (462)
T ss_dssp             EESEB--SHHHHHHGTEEEEEE
T ss_pred             cCCcc--hHHHHHHHhCCccCC
Confidence            99965  799999999999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.93  E-value=1.4e-25  Score=181.76  Aligned_cols=102  Identities=25%  Similarity=0.284  Sum_probs=92.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc--eeeEEEcCCCC--------CCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID--CGQVGINVPIP--------VPLS   70 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~--ag~v~VN~~~~--------~~~~   70 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.+++++++  +|+|+||+...        ...+
T Consensus       391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~  470 (513)
T cd07128         391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP  470 (513)
T ss_pred             chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence            5688999999999999999999999999999999999999999999999999997  99999998531        2245


Q ss_pred             CCccCCccCCCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         71 MFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        71 ~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      .+||||+|.||+|++. +|.+++++|++.|+|.
T Consensus       471 ~~pfGG~k~SG~G~~~-gg~~~l~~~~~~k~v~  502 (513)
T cd07128         471 QLVHGGPGRAGGGEEL-GGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             CCCCCCcccCCCCccc-ccHHHHHHhheeeeee
Confidence            7899999999999862 5799999999999875

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=99.93  E-value=1.8e-25  Score=178.94  Aligned_cols=99  Identities=34%  Similarity=0.516  Sum_probs=92.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|+|+||+..  ..+.+||||+|.|
T Consensus       367 ~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~S  444 (466)
T cd07138         367 MTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA--FNPGAPFGGYKQS  444 (466)
T ss_pred             ChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC--CCCCCCcCCcccc
Confidence            57889999999999999999999999999999999999999999999999999999999999853  3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+++
T Consensus       445 G~G~~--~g~~~~~~~~~~k~v~  465 (466)
T cd07138         445 GNGRE--WGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             cCCcc--chHHHHHHhcceeEEe
Confidence            99975  6999999999999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.93  E-value=3.6e-25  Score=178.81  Aligned_cols=104  Identities=25%  Similarity=0.372  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~   77 (124)
                      |++++||+||||++|++|+  |+||||+++|.++|||+++|||+|.+++.++++++++|+|+||+..... .+.+||||+
T Consensus       393 ~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~  472 (500)
T cd07083         393 ARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGF  472 (500)
T ss_pred             ChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCcc
Confidence            6789999999999999999  9999999999999999999999999999999999999999999975433 245799999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |.||+|+. .+|++++++|++.|+++.+
T Consensus       473 k~SG~G~~-~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         473 KLSGTNAK-TGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             ccccCCCc-ccCHHHHHHhhheeEEEEc
Confidence            99999942 2789999999999998864

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.93  E-value=3.2e-25  Score=176.90  Aligned_cols=100  Identities=31%  Similarity=0.501  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|..++||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       355 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~S  433 (455)
T cd07093         355 SRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVR-DLRTPFGGVKAS  433 (455)
T ss_pred             ChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccC
Confidence            5788999999999999999999999999999999999999999999999999999999999997654 356899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++|+++|++.|+++
T Consensus       434 G~G~~--~g~~~~~~~~~~k~~~  454 (455)
T cd07093         434 GIGRE--GGDYSLEFYTELKNVC  454 (455)
T ss_pred             cCCCC--chHHHHHHHhceeEEe
Confidence            99975  7999999999999886

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=99.93  E-value=3.8e-25  Score=179.53  Aligned_cols=103  Identities=22%  Similarity=0.358  Sum_probs=92.4

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCC-CCcEEEEecCCHHHHHHHHHhc--ceeeEEEcCCCCCC-CCCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNP-YGNGTAIFTNNGATARKFSQEI--DCGQVGINVPIPVP-LSMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~-~gl~~~vft~d~~~~~~~~~~l--~ag~v~VN~~~~~~-~~~~pf   74 (124)
                      |++++||+||||++|++|+  |+||||+++|++. |||+++|||+|.+++.++++++  ++|.|+||+..... .+.+||
T Consensus       410 ~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~Pf  489 (522)
T cd07123         410 HKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPF  489 (522)
T ss_pred             ChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCC
Confidence            6899999999999999999  4799999999985 9999999999999999999996  59999999875432 356899


Q ss_pred             CCccCCCCC-CCCcCcHHHHHhcceeeEEEEe
Q psy10611         75 TGSRGSFLG-ENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        75 gG~~~SG~G-~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      ||+|.||+| ++  +|++++++|++.|++++.
T Consensus       490 GG~k~SG~gg~~--~g~~~l~~~~~~k~~~~~  519 (522)
T cd07123         490 GGARASGTNDKA--GSPLNLLRWVSPRTIKET  519 (522)
T ss_pred             CcchhcCCCccc--CCHHHHHHhcceEEEEEe
Confidence            999999996 65  799999999999998865

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.92  E-value=4.2e-25  Score=184.66  Aligned_cols=103  Identities=21%  Similarity=0.184  Sum_probs=95.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+++.. .+..||||+|.|
T Consensus       585 ~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~-~~~~pfGG~k~S  663 (715)
T TIGR01092       585 TKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRF-SDGFRFGLGAEV  663 (715)
T ss_pred             chhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCC-CCCCCCcCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 356799999999


Q ss_pred             CCCCC--CcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGEN--HFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~--~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +.+|++++++|++.|+|.+
T Consensus       664 G~g~~~~~~~g~~~l~~~~~~k~v~~  689 (715)
T TIGR01092       664 GISTSRIHARGPVGVEGLLTTRWLLR  689 (715)
T ss_pred             ccccCCCCCCChhHHHHhceEEEEEE
Confidence            99954  2469999999999999986

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.92  E-value=2e-25  Score=177.48  Aligned_cols=96  Identities=26%  Similarity=0.323  Sum_probs=88.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++++|.|+||+......+.+||||+|.|
T Consensus       331 ~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  410 (431)
T cd07095         331 ADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLS  410 (431)
T ss_pred             ChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence            67899999999999999999999999999999999999999999999999999999999999876544456899999999


Q ss_pred             CCCCCCcCcHHHHHhcce
Q psy10611         81 FLGENHFYGKQGFYFYTE   98 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~   98 (124)
                      |+|++  +|+++++.|+.
T Consensus       411 G~G~~--~g~~~~~~~~~  426 (431)
T cd07095         411 GNHRP--SAYYAADYCAY  426 (431)
T ss_pred             cCCCC--ChHHHHHHHhh
Confidence            99976  69999995544

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.92  E-value=4.2e-25  Score=175.93  Aligned_cols=100  Identities=38%  Similarity=0.532  Sum_probs=93.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|.+++||+++|||+|.+++.++++++++|.|+||++... .+.+||||.|.|
T Consensus       351 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~S  429 (451)
T cd07103         351 MLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS-DAEAPFGGVKES  429 (451)
T ss_pred             CHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccC
Confidence            5688999999999999999999999999999999999999999999999999999999999998643 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|+++++.|++.|+++
T Consensus       430 G~G~~--~g~~~~~~~~~~k~v~  450 (451)
T cd07103         430 GLGRE--GGKEGLEEYLETKYVS  450 (451)
T ss_pred             cCCcc--chHHHHHHHhceeEEe
Confidence            99975  7999999999999885

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.92  E-value=5.6e-25  Score=178.52  Aligned_cols=102  Identities=19%  Similarity=0.245  Sum_probs=90.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--ceeeEEEcCCCC--------CCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEI--DCGQVGINVPIP--------VPLS   70 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l--~ag~v~VN~~~~--------~~~~   70 (124)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++  ++|+|+||+...        ...+
T Consensus       394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~  473 (521)
T PRK11903        394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMP  473 (521)
T ss_pred             chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCC
Confidence            467899999999999999999999999999999999999999999999999999  899999997531        1234


Q ss_pred             CCccCCccCCCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         71 MFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        71 ~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      .+||||+|.||+|++. +|.+++++|++.|++.
T Consensus       474 ~~PfGG~k~SG~Gr~~-g~~~~l~~~t~~~~~~  505 (521)
T PRK11903        474 QSLHGGPGRAGGGEEL-GGLRALAFYHRRSAVQ  505 (521)
T ss_pred             CCCCCCCCcCcCCccc-ccHHHHHHHhccceee
Confidence            6899999999999763 5689999999977654

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=6.4e-25  Score=182.66  Aligned_cols=103  Identities=23%  Similarity=0.264  Sum_probs=92.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc--eeeEEEcCCC--------CCCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID--CGQVGINVPI--------PVPLS   70 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~--ag~v~VN~~~--------~~~~~   70 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++++++  +|.|+||+.+        ....+
T Consensus       395 ~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~  474 (675)
T PRK11563        395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLP  474 (675)
T ss_pred             hhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCc
Confidence            4688999999999999999999999999999999999999999999999999997  9999999752        11225


Q ss_pred             CCccCCccCCCCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         71 MFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        71 ~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      .+||||+|.||+|++. +|.+++++|++.|++..
T Consensus       475 ~~pfGG~k~SG~G~~~-~g~~~~~~f~~~k~~~~  507 (675)
T PRK11563        475 QLVHGGPGRAGGGEEL-GGLRGVKHYMQRTAVQG  507 (675)
T ss_pred             CCCcCCCCCCCCCccc-cchhHHHHhheeeeeec
Confidence            7899999999999862 57999999999998764

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.92  E-value=1.7e-24  Score=179.82  Aligned_cols=102  Identities=21%  Similarity=0.231  Sum_probs=90.5

Q ss_pred             CccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--ceeeEEE-cCC-------CCCCCCC
Q psy10611          2 KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEI--DCGQVGI-NVP-------IPVPLSM   71 (124)
Q Consensus         2 ~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l--~ag~v~V-N~~-------~~~~~~~   71 (124)
                      ++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++.++++++  ++|.|+| |+.       .....+.
T Consensus       384 ~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~  463 (663)
T TIGR02278       384 AVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPR  463 (663)
T ss_pred             hHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCC
Confidence            68899999999999999999999999999999999999999999999999999  7999999 642       1122356


Q ss_pred             CccCCccCCCCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         72 FSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        72 ~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      +||||+|.||+|++. +|.+++++|++.|+++.
T Consensus       464 ~pfGG~k~SG~G~~~-g~~~~l~~f~~~k~v~~  495 (663)
T TIGR02278       464 LLHGGPGRAGGGEEL-GGLRSVKHYMQRTAIQG  495 (663)
T ss_pred             CCCCCCccCcCCCcc-chHHHHHHhceeEEEEc
Confidence            899999999999762 46899999999998874

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>KOG2451|consensus

Probab=99.91  E-value=1.1e-24  Score=168.39  Aligned_cols=103  Identities=26%  Similarity=0.320  Sum_probs=96.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |.+.+||+|||+.+|.+|+|+||+|+++|++..||++++|++|..+..+++++|+.|+|.+|.... ++...||||+|+|
T Consensus       397 m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegli-s~~~~pFGGVKeS  475 (503)
T KOG2451|consen  397 MLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLI-SDAEAPFGGVKES  475 (503)
T ss_pred             ceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccccee-cccccCcCCcccc
Confidence            567899999999999999999999999999999999999999999999999999999999998743 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |.||+  ++++|+++|+..|.+++..
T Consensus       476 G~GRE--gskyGidey~~ik~icig~  499 (503)
T KOG2451|consen  476 GFGRE--GSKYGIDEYLVIKYICIGT  499 (503)
T ss_pred             ccCcc--ccccchhhhhhhheeeecC
Confidence            99987  8999999999999999753

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.91  E-value=4e-24  Score=172.81  Aligned_cols=99  Identities=24%  Similarity=0.319  Sum_probs=89.4

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~   77 (124)
                      |.+++||+||||++|++|+  ++||||+++|.++|||+++|||+|.+++.++++++++|.|+||+..... .+.+||||+
T Consensus       398 ~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~  477 (500)
T TIGR01238       398 IAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQ  477 (500)
T ss_pred             chHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcc
Confidence            5678999999999999998  7999999999999999999999999999999999999999999865332 244799999


Q ss_pred             cCCCCC-CCCcCcHHHHHhcceeeE
Q psy10611         78 RGSFLG-ENHFYGKQGFYFYTETKT  101 (124)
Q Consensus        78 ~~SG~G-~~~~~G~~~l~~~~~~k~  101 (124)
                      |.||+| ++  +|++++++|++.|.
T Consensus       478 k~SG~G~~~--gg~~~~~~~~~~k~  500 (500)
T TIGR01238       478 GLSGTGPKA--GGPHYLYRLTQVQY  500 (500)
T ss_pred             ccccCCCcc--CCHHHHHHHHhhcC
Confidence            999999 54  79999999999873

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.91  E-value=9.1e-24  Score=181.78  Aligned_cols=105  Identities=26%  Similarity=0.323  Sum_probs=94.8

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCC-CCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPL-SMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~-~~~pfgG~   77 (124)
                      |.+++||+||||++|++|+  +++|+|+++|.++|||+++|||+|.+++.++++++++|.|+||+...... ..+||||+
T Consensus       920 ~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~  999 (1038)
T PRK11904        920 ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQ  999 (1038)
T ss_pred             cHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCC
Confidence            4568999999999999998  79999999999999999999999999999999999999999999754433 45799999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |.||+|. ..+|++++.+|++.|+|+++.
T Consensus      1000 ~~SG~G~-kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904       1000 GLSGTGP-KAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred             CCCCCCC-ccchHHHHHHHhceEEEEEcc
Confidence            9999995 247999999999999999865

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.91  E-value=9.4e-24  Score=166.98  Aligned_cols=101  Identities=35%  Similarity=0.447  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+|||++++|..++||+++|||+|.+.+.++++++++|.|+||+......+.+||||.+.|
T Consensus       331 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~s  410 (432)
T cd07078         331 MPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQS  410 (432)
T ss_pred             ChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcC
Confidence            46789999999999999999999999999999999999999999999999999999999999986554578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|+  ++|+++++.|++.|+++
T Consensus       411 g~g~--~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         411 GIGR--EGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             cCCc--cchHHHHHHhhceEEEE
Confidence            9996  48999999999999875

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.90  E-value=2.7e-23  Score=161.46  Aligned_cols=101  Identities=34%  Similarity=0.437  Sum_probs=94.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      +++++||+|||+++|++|++++||++++|..++||+++|||+|...+.++++++++|.|+||+.+....+..||||.+.|
T Consensus       266 ~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~s  345 (367)
T cd06534         266 MPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNS  345 (367)
T ss_pred             CccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccC
Confidence            46889999999999999999999999999999999999999999999999999999999999986553578899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|+.  +|++++++|++.|+++
T Consensus       346 G~g~~--~g~~~~~~~~~~k~i~  366 (367)
T cd06534         346 GIGRE--GGPYGLEEYTRTKTVV  366 (367)
T ss_pred             ccCCC--ChHHHHHHhceEEEEe
Confidence            99975  7999999999999875

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.90  E-value=1.8e-23  Score=167.21  Aligned_cols=99  Identities=15%  Similarity=0.105  Sum_probs=89.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC--HHHHHHHHHhc--ceeeEEEcCCCCCCC--CCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNN--GATARKFSQEI--DCGQVGINVPIPVPL--SMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d--~~~~~~~~~~l--~ag~v~VN~~~~~~~--~~~pf   74 (124)
                      |++++||+||||++|++|+|.||+|+++|.+++||+++|||+|  ..++.++++++  ++|+|+||+.+....  +.+||
T Consensus       344 ~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pf  423 (454)
T cd07129         344 DPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVH  423 (454)
T ss_pred             chhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCC
Confidence            6789999999999999999999999999999999999999999  89999999999  699999998654322  47899


Q ss_pred             CC-ccCCCCCCCCcCcHHHHHhccee
Q psy10611         75 TG-SRGSFLGENHFYGKQGFYFYTET   99 (124)
Q Consensus        75 gG-~~~SG~G~~~~~G~~~l~~~~~~   99 (124)
                      || +|.||+|++...|++++++|+++
T Consensus       424 gG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         424 GGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             CCCcCCCCCCccccccHHHHHHhccc
Confidence            99 99999998633589999999986

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>KOG2456|consensus

Probab=99.90  E-value=1.7e-24  Score=168.06  Aligned_cols=118  Identities=31%  Similarity=0.414  Sum_probs=105.9

Q ss_pred             CccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCC-CCCCCCCccCCccCC
Q psy10611          2 KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI-PVPLSMFSFTGSRGS   80 (124)
Q Consensus         2 ~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~-~~~~~~~pfgG~~~S   80 (124)
                      ++|+||+||||++|+.|+|++|+|+.+|+.+..|++++||+|.....++.++..+|.|.+|+.. +.....+||||++.|
T Consensus       330 p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~S  409 (477)
T KOG2456|consen  330 PVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGES  409 (477)
T ss_pred             hhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCcc
Confidence            6899999999999999999999999999999999999999999999999999999999999964 445688999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccCccccccccccCCC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMP  121 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~  121 (124)
                      |+|+  |+|+++++.|++.|++..+..+.+..+...+|+|.
T Consensus       410 GmG~--YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S  448 (477)
T KOG2456|consen  410 GMGR--YHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYS  448 (477)
T ss_pred             cccc--ccccccccccccchhhhhcccccchhhhhcCCCCC
Confidence            9995  68999999999999998777666655555666654

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.89  E-value=7.1e-23  Score=178.19  Aligned_cols=104  Identities=22%  Similarity=0.245  Sum_probs=94.1

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCC-CCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPL-SMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~-~~~pfgG~   77 (124)
                      |.+++||+||||++|++|+  +++|+|+++|.++|||+++|||+|.+++.++.+++++|+|+||+...... ..+||||+
T Consensus       912 ~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~  991 (1208)
T PRK11905        912 ISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGE  991 (1208)
T ss_pred             hHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCC
Confidence            4578999999999999997  79999999999999999999999999999999999999999999754433 45799999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |.||+|+ +.+|++++.+|++.|+++++
T Consensus       992 ~~SG~G~-kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905        992 GLSGTGP-KAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred             CCCCCCC-cCCCHHHHHHHhhcceeecc
Confidence            9999996 25899999999999999864

>KOG2454|consensus

Probab=99.89  E-value=1.1e-23  Score=163.35  Aligned_cols=120  Identities=24%  Similarity=0.404  Sum_probs=107.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |.|++||.||||++++++++.|++++++|++++||.++||+.|..++..++.++++|+|-||+...+-...+||||.|.|
T Consensus       429 MKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~S  508 (583)
T KOG2454|consen  429 MKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDS  508 (583)
T ss_pred             hhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCC
Confidence            78999999999999999999999999999999999999999999999999999999999999976554567999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccCccccccccccCCCC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPV  122 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~  122 (124)
                      |+||  +.|.+||+.....|+|+..-..+..+-.|.+..||+
T Consensus       509 GyGr--FaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi  548 (583)
T KOG2454|consen  509 GYGR--FAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPI  548 (583)
T ss_pred             Cccc--cccHHHHHHHhcccceeccchhhhhccCCccccccC
Confidence            9996  689999999999999975433344455677777875

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.89  E-value=8.5e-23  Score=162.93  Aligned_cols=99  Identities=14%  Similarity=0.179  Sum_probs=88.3

Q ss_pred             CccccCcccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc-ceeeEEEcCC-CCCCCCCCccCC-
Q psy10611          2 KCYKEEIFGPVLVCLTVDT--LDEAISIINKNPYGNGTAIFTNNGATARKFSQEI-DCGQVGINVP-IPVPLSMFSFTG-   76 (124)
Q Consensus         2 ~i~~eE~FgPv~~v~~~~~--~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l-~ag~v~VN~~-~~~~~~~~pfgG-   76 (124)
                      ++++||+||||++|++|+|  ++|+++++|+++|||+++|||+|.+++.++++++ ++|+|+||+. +....+..|||| 
T Consensus       336 ~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~  415 (442)
T cd07084         336 ELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGG  415 (442)
T ss_pred             hHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCC
Confidence            7899999999999999999  9999999999999999999999999999999999 9999999976 444445567766 


Q ss_pred             ccCCCCCCCCcCcHHHHHhcceeeE
Q psy10611         77 SRGSFLGENHFYGKQGFYFYTETKT  101 (124)
Q Consensus        77 ~~~SG~G~~~~~G~~~l~~~~~~k~  101 (124)
                      .|.||+|++ .+|.+++++|++...
T Consensus       416 ~k~sG~g~~-~~g~~~~~~~~~~~~  439 (442)
T cd07084         416 PAADPRGAG-IGGPEAIKLVWRCHA  439 (442)
T ss_pred             CCCCCCCcc-ccchHHhhheeeeee
Confidence            889999975 249999999998754

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.88  E-value=6.6e-23  Score=163.12  Aligned_cols=96  Identities=23%  Similarity=0.214  Sum_probs=82.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGN--GTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl--~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|.++|||  +++|||+|.+++.++++++++|+|+||++..   +.+||||+|
T Consensus       324 ~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~---~~~p~gG~k  400 (429)
T cd07121         324 HPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY---AGLGVGGEG  400 (429)
T ss_pred             CCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc---CccccCCCc
Confidence            68899999999999999999999999999999998  9999999999999999999999999998743   568999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      .|++--   +|+.| +.++..|+++
T Consensus       401 ~s~~~~---~~~~~-~~~~~~~~~~  421 (429)
T cd07121         401 YTTFTI---AGPTG-EGLTSARTFT  421 (429)
T ss_pred             cceEEe---cCCcC-cCccChhhhh
Confidence            998721   24444 4445555554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.87  E-value=2.8e-22  Score=161.75  Aligned_cols=85  Identities=16%  Similarity=0.176  Sum_probs=77.4

Q ss_pred             CCccccCcccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceee--EEEcCCCCCCCCC---Cc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDT--LDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQ--VGINVPIPVPLSM---FS   73 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~--~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~--v~VN~~~~~~~~~---~p   73 (124)
                      |++++||+||||++|++|+|  +|||++++|+++|||+++|||+|.+++.++++++++|+  |+||+........   .|
T Consensus       380 ~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~p  459 (489)
T cd07126         380 FELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGP  459 (489)
T ss_pred             CHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCC
Confidence            67899999999999999999  99999999999999999999999999999999999999  6688876544333   89


Q ss_pred             cCCccCCCCCCC
Q psy10611         74 FTGSRGSFLGEN   85 (124)
Q Consensus        74 fgG~~~SG~G~~   85 (124)
                      |||+|.||.|++
T Consensus       460 fgg~k~sg~g~~  471 (489)
T cd07126         460 AGDPRGAGIGTP  471 (489)
T ss_pred             CCCCcccCCCCH
Confidence            999999999975

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.86  E-value=7.4e-22  Score=155.52  Aligned_cols=101  Identities=17%  Similarity=0.064  Sum_probs=89.9

Q ss_pred             CCccccCcccceEEEEEeCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLD----EAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFT   75 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~----eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfg   75 (124)
                      |++++||+||||++|++|+|++    +|++++|+.+|||+++|||+|.+++.++++++++|.|+||++.... ...+|||
T Consensus       288 ~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~g  367 (397)
T cd07077         288 FDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKG  367 (397)
T ss_pred             CChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCC
Confidence            5788999999999999999996    6667889999999999999999999999999999999999876442 2457899


Q ss_pred             Ccc--CCCCCCCCcCc-HHHHHhcceeeEEE
Q psy10611         76 GSR--GSFLGENHFYG-KQGFYFYTETKTVT  103 (124)
Q Consensus        76 G~~--~SG~G~~~~~G-~~~l~~~~~~k~v~  103 (124)
                      |.+  .||.|+.  +| .++++.|++.|+++
T Consensus       368 g~~~~~SG~g~~--~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         368 VERIVTSGMNNI--FGAGVGHDALRPLKRLV  396 (397)
T ss_pred             cceEEEccccCC--CCCCCChHHhcceeEee
Confidence            999  8999964  68 99999999999875

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.86  E-value=6.1e-22  Score=158.97  Aligned_cols=97  Identities=23%  Similarity=0.218  Sum_probs=85.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGN--GTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl--~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||  +++|||+|.+++.++++++++|+|+||++..   +.+||||.|
T Consensus       354 ~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~---~~~p~gg~~  430 (465)
T PRK15398        354 HPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY---AGLGLGGEG  430 (465)
T ss_pred             CchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc---cccCcCCCC
Confidence            67899999999999999999999999999999998  9999999999999999999999999998742   578999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      .|..-   .+|+.| ...+..|+++.
T Consensus       431 ~s~~~---~~~~~g-~~~~~~~~~~~  452 (465)
T PRK15398        431 FTTFT---IATPTG-EGVTSARTFTR  452 (465)
T ss_pred             Cceee---ecccCC-CCccchhhhhh
Confidence            99763   247777 77777776654

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.86  E-value=2.2e-21  Score=169.42  Aligned_cols=100  Identities=26%  Similarity=0.326  Sum_probs=89.9

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~   77 (124)
                      |.+++||+||||++|++|+  ++||+|+++|.++|||+++|||+|.+++.++++++++|+|+||+..... ...+||||+
T Consensus      1009 ~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~ 1088 (1318)
T PRK11809       1009 FDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGE 1088 (1318)
T ss_pred             hhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCc
Confidence            3567999999999999997  7999999999999999999999999999999999999999999875433 245799999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeE
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKT  101 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~  101 (124)
                      |.||+|.. .+|++++..|++.+.
T Consensus      1089 g~SG~G~k-aGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1089 GLSGTGPK-AGGPLYLYRLLATRP 1111 (1318)
T ss_pred             CcCCCCCC-CCCHHHHHHHhccCC
Confidence            99999963 489999999999874

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.85  E-value=2.1e-21  Score=153.30  Aligned_cols=99  Identities=25%  Similarity=0.247  Sum_probs=85.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.++++++++++++|.|+||++.... +..|||=...-
T Consensus       298 ~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~-~~~pfG~~~~~  376 (398)
T TIGR00407       298 KTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFT-DGFRFGFGAEV  376 (398)
T ss_pred             cccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcC-CCcccccceee
Confidence            57899999999999999999999999999999999999999999999999999999999999986543 45788833332


Q ss_pred             C--CCCCCcCcHHHHHhcceee
Q psy10611         81 F--LGENHFYGKQGFYFYTETK  100 (124)
Q Consensus        81 G--~G~~~~~G~~~l~~~~~~k  100 (124)
                      |  +++.+.+|+.+++.|++.|
T Consensus       377 ~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       377 GISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             EEecCCCcCCCCcCHHHhcCCC
Confidence            2  2555678999999999865

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>KOG2452|consensus

Probab=99.82  E-value=2.2e-20  Score=148.32  Aligned_cols=103  Identities=29%  Similarity=0.375  Sum_probs=93.7

Q ss_pred             CCccccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |-+++||.||||++|.+|+  |+|++++++|.+++||+++|||+|...+.+++..+++|+|+||+..-- .-..||||+|
T Consensus       777 ~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~kt-dvaapfggfk  855 (881)
T KOG2452|consen  777 MFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKT-DVAAPFGGFK  855 (881)
T ss_pred             hhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeecccc-ccccCCCCcc
Confidence            4578999999999999998  699999999999999999999999999999999999999999986422 2457999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|..  .|+.+|++|...|+|+++|
T Consensus       856 qsgfgkd--~ge~alneyl~~ktit~ey  881 (881)
T KOG2452|consen  856 QSGFGKD--LGEAALNEYLRVKTVTFEY  881 (881)
T ss_pred             ccccccc--hhHHHHhhheeeEEEEeeC
Confidence            9999976  5999999999999999864

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.80  E-value=2.9e-19  Score=152.18  Aligned_cols=102  Identities=17%  Similarity=0.200  Sum_probs=90.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC---------C
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINK----NPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP---------V   67 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~----~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~---------~   67 (124)
                      |++++ |+||||++|++|+|+||||+++|+    .++||+++|||+|.+++.+|++++++|+|+||+++.         .
T Consensus       337 ~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~  415 (862)
T PRK13805        337 EPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNK  415 (862)
T ss_pred             Ccchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCC
Confidence            45666 799999999999999999999988    489999999999999999999999999999999752         2


Q ss_pred             CCCCCccCCccCCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         68 PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        68 ~~~~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ..+++|||+ +.||.|+.  +|+.|++.|++.|+|..+.
T Consensus       416 ~~~~~~fG~-G~~g~~~~--~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        416 LAPSLTLGC-GSWGGNSV--SENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             cCccccccc-cCCCCCcC--CCCCCHHHhheeeeeeecc
Confidence            346789998 99999964  6999999999999988643

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.80  E-value=2.1e-19  Score=143.46  Aligned_cols=103  Identities=20%  Similarity=0.291  Sum_probs=80.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCC---HHHHHHHHHhcceeeEEEcCCC-CCCC-CC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKN----PYGNGTAIFTNN---GATARKFSQEIDCGQVGINVPI-PVPL-SM   71 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~----~~gl~~~vft~d---~~~~~~~~~~l~ag~v~VN~~~-~~~~-~~   71 (124)
                      |++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .+++.++++++++|+|+||++. .... ..
T Consensus       321 ~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~  400 (439)
T cd07081         321 HEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDL  400 (439)
T ss_pred             CchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccc
Confidence            6789999999999999999999999999965    899999999999   9999999999999999999865 2211 12


Q ss_pred             CccCCccCCCCCCCCcCcHH-----HHHhcceeeEEE
Q psy10611         72 FSFTGSRGSFLGENHFYGKQ-----GFYFYTETKTVT  103 (124)
Q Consensus        72 ~pfgG~~~SG~G~~~~~G~~-----~l~~~~~~k~v~  103 (124)
                      .-|||++.+..|...++|..     +.+.|++.|.|.
T Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (439)
T cd07081         401 YNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA  437 (439)
T ss_pred             cCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence            34767776544432222222     366777777665

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>KOG2455|consensus

Probab=99.74  E-value=1.7e-18  Score=135.95  Aligned_cols=115  Identities=23%  Similarity=0.345  Sum_probs=98.0

Q ss_pred             CccccCcccceEEEEEeCC--HHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHHhcc--eeeEEEcCCC-CCCCCCCccC
Q psy10611          2 KCYKEEIFGPVLVCLTVDT--LDEAISIINK-NPYGNGTAIFTNNGATARKFSQEID--CGQVGINVPI-PVPLSMFSFT   75 (124)
Q Consensus         2 ~i~~eE~FgPv~~v~~~~~--~~eai~~~n~-~~~gl~~~vft~d~~~~~~~~~~l~--ag~v~VN~~~-~~~~~~~pfg   75 (124)
                      +|+.||+|||||+|+.|+|  ++|++.++.. +.|+|+++||++|.+.+....++++  +|..+||+-. +......|||
T Consensus       439 pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFG  518 (561)
T KOG2455|consen  439 PIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFG  518 (561)
T ss_pred             chhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccC
Confidence            6899999999999999984  8999999766 7999999999999999999999887  8999999954 4445678999


Q ss_pred             CccCCCCCCCCcCcHHHHHhcceeeEEEEeccCccccccccccCCCCC
Q psy10611         76 GSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVM  123 (124)
Q Consensus        76 G~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~  123 (124)
                      |.++||+.. ..+|++-+-+|+.++++-+...      +..+..||.|
T Consensus       519 GaR~SGTND-KaGgp~~l~RwtSp~~ikEt~~------~l~d~~yp~~  559 (561)
T KOG2455|consen  519 GARLSGTND-KAGGPHYLLRWTSPLSIKETFV------PLTDVKYPSM  559 (561)
T ss_pred             cccccCCCC-CCCCceEEEeecCcchhhhccc------CCcccCcCCC
Confidence            999999976 4689999999999887665543      4577788876

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.73  E-value=2.3e-17  Score=133.27  Aligned_cols=100  Identities=14%  Similarity=0.097  Sum_probs=81.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-----C---
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINK----NPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-----P---   68 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~----~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-----~---   68 (124)
                      |++ .+|+||||++|++|+|+||||+++|+    .+|||+++|||+|.+++.+|++++++|+|+||++...     .   
T Consensus       332 ~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~  410 (488)
T TIGR02518       332 NPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNL  410 (488)
T ss_pred             Ccc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCC
Confidence            344 79999999999999999999999998    6899999999999999999999999999999974311     1   


Q ss_pred             CC--CCccCCccCCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         69 LS--MFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        69 ~~--~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .+  .+.||+++.+++.     .+-+++.++..|+|....
T Consensus       411 ~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       411 VPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGV  445 (488)
T ss_pred             CccccccccccCCCcCC-----CCCCHHHhheeeEEEecc
Confidence            11  2236666665444     377999999999988644

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.71  E-value=4.1e-17  Score=130.30  Aligned_cols=65  Identities=18%  Similarity=0.319  Sum_probs=60.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKN----PYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP   66 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~----~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~   66 (124)
                      |+++ +|.||||++|++|+|+|||++++|++    +|||+++|||+|.+++.++++++++|+|+||+++.
T Consensus       323 ~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~  391 (436)
T cd07122         323 EPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSS  391 (436)
T ss_pred             Ccch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCcc
Confidence            5666 56799999999999999999999997    79999999999999999999999999999998764

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.68  E-value=1.5e-16  Score=130.01  Aligned_cols=97  Identities=15%  Similarity=0.185  Sum_probs=76.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcC--CCC-cEEEEecCCHHHHHHHHHhc----------ceeeEEEcCCCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKN--PYG-NGTAIFTNNGATARKFSQEI----------DCGQVGINVPIPV   67 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~--~~g-l~~~vft~d~~~~~~~~~~l----------~ag~v~VN~~~~~   67 (124)
                      |++++||+||||++|++|+|+||||+++|++  +|| |+++|||+|.+++.++.+++          ++|.|+||++.  
T Consensus       437 ~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~--  514 (551)
T TIGR02288       437 EAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSA--  514 (551)
T ss_pred             CHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCC--
Confidence            6789999999999999999999999999998  566 99999999999999999999          77788887743  


Q ss_pred             CCCCCccCCccCCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         68 PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        68 ~~~~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                           +|++.+.||.-. ..+...+--.|...|.-+++
T Consensus       515 -----~~~~~~~sg~n~-~a~~~~~~~~~~~~r~~~~~  546 (551)
T TIGR02288       515 -----AFSDFHGTGGNP-AANASLSDGAFVANRFRVVQ  546 (551)
T ss_pred             -----CCCCCCCCCCCC-ccCCcccchhhhhcceEEEE
Confidence                 366667776543 22344555566665544443

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.68  E-value=1.4e-16  Score=130.17  Aligned_cols=103  Identities=14%  Similarity=0.187  Sum_probs=82.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCC--C-CcEEEEecCCHHHHHHHHHhc-ce-eeEEEcCCCCCCCCC--Cc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNP--Y-GNGTAIFTNNGATARKFSQEI-DC-GQVGINVPIPVPLSM--FS   73 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~--~-gl~~~vft~d~~~~~~~~~~l-~a-g~v~VN~~~~~~~~~--~p   73 (124)
                      |++++||+||||++|++|+|.+||++++|++.  + ||+++|||+|.+++.++.+++ ++ |.++||+.. .....  +|
T Consensus       437 ~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg-~v~~~q~~~  515 (549)
T cd07127         437 EAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG-GVFVNQSAA  515 (549)
T ss_pred             CHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCc-eEEEecCcC
Confidence            67899999999999999999999999999973  4 699999999999999999985 44 599999532 22233  45


Q ss_pred             cCCccCCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         74 FTGSRGSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        74 fgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |||.+.||... ..+.......|...|..+++
T Consensus       516 Fg~~~~sg~n~-~a~~~~~~~~fv~~r~~~~~  546 (549)
T cd07127         516 FSDFHGTGANP-AANAALTDGAFVANRFRVVQ  546 (549)
T ss_pred             CCCCCCCCCCc-ccccccchhhhhhcceEEEE
Confidence            99999998864 34566677777776655543

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>KOG2453|consensus

Probab=99.68  E-value=6.1e-17  Score=124.17  Aligned_cols=109  Identities=28%  Similarity=0.359  Sum_probs=98.2

Q ss_pred             CccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH--hcceeeEEEcCCCCCCCCCCccCCccC
Q psy10611          2 KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQ--EIDCGQVGINVPIPVPLSMFSFTGSRG   79 (124)
Q Consensus         2 ~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~--~l~ag~v~VN~~~~~~~~~~pfgG~~~   79 (124)
                      ++..+|.|.||+.|.+|.+++||+++-|..+.||++||||+|+.+++++.-  ..++|.|.||-++..+.-+-.|||-|.
T Consensus       390 ~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~  469 (507)
T KOG2453|consen  390 PVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKE  469 (507)
T ss_pred             chhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccc
Confidence            567899999999999999999999999999999999999999999999985  668999999998765555667999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEeccCcccc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWRESDVT  112 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~  112 (124)
                      .|-||+  .|.++++.|+++.+.+|+|+.+-+.
T Consensus       470 tgggre--sgsdswkqymrrstctinyskelpl  500 (507)
T KOG2453|consen  470 TGGGRE--SGSDSWKQYMRRSTCTINYSKELPL  500 (507)
T ss_pred             cCCCcc--cCchHHHHHHhhceeeeeccccCch
Confidence            999987  5999999999999999999865543

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.63  E-value=5.5e-16  Score=124.97  Aligned_cols=99  Identities=24%  Similarity=0.297  Sum_probs=89.2

Q ss_pred             cccCcccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccCC
Q psy10611          4 YKEEIFGPVLVCLTVD--TLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRGS   80 (124)
Q Consensus         4 ~~eE~FgPv~~v~~~~--~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~S   80 (124)
                      ++.|+||||+.|++|+  ++++.|+.+|.++||||.+|+|+-.+.+..+..++++|.+|||+.... ...-+||||-+.|
T Consensus       475 L~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLS  554 (769)
T COG4230         475 LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLS  554 (769)
T ss_pred             HHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCC
Confidence            4789999999999998  799999999999999999999999999999999999999999997643 3456899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|. ..+|+..|..|...+...
T Consensus       555 GTGP-KAGGp~YL~Rl~~~~p~~  576 (769)
T COG4230         555 GTGP-KAGGPLYLLRLVSERPWS  576 (769)
T ss_pred             CCCC-CCCChHHHHHHHhcCCcC
Confidence            9997 579999999999877643

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.34  E-value=2e-12  Score=101.13  Aligned_cols=100  Identities=28%  Similarity=0.317  Sum_probs=84.7

Q ss_pred             cccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCCCC-
Q psy10611          4 YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFL-   82 (124)
Q Consensus         4 ~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~SG~-   82 (124)
                      |..|++.+++.|-.++++++||+++|+...+|+-+|.|+|...+.+|.+.+++..|+||.++.|. ++.-||=..+-|+ 
T Consensus       309 w~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFt-DG~~fG~GaEiGIS  387 (417)
T COG0014         309 WDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFT-DGGQFGLGAEIGIS  387 (417)
T ss_pred             HHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccc-cCccccCceEEEee
Confidence            56799999999999999999999999999999999999999999999999999999999998875 4444442222222 


Q ss_pred             -CCCCcCcHHHHHhcceeeEEEE
Q psy10611         83 -GENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        83 -G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                       ..-|.+|+-||+.+|..|.+..
T Consensus       388 TqKlHARGPmGLe~LTs~Kyiv~  410 (417)
T COG0014         388 TQKLHARGPMGLEALTSYKYIVR  410 (417)
T ss_pred             cCcccCCCCCChhhhcceeEEEe
Confidence             2335689999999999998874

>KOG2449|consensus

Probab=99.12  E-value=2.6e-11  Score=82.67  Aligned_cols=76  Identities=76%  Similarity=1.219  Sum_probs=67.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTG   76 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG   76 (124)
                      |.+++||+||||+..+.-++++|+|.++|.++||-...|||.+.+.++++.+..++|-+.+|...+..++...|.|
T Consensus        78 ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg  153 (157)
T KOG2449|consen   78 MSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSG  153 (157)
T ss_pred             cceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccc
Confidence            7889999999999999999999999999999999999999999999999999999999999987654344433444

>KOG4165|consensus

Probab=98.80  E-value=1.1e-08  Score=78.95  Aligned_cols=99  Identities=23%  Similarity=0.176  Sum_probs=86.3

Q ss_pred             cccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCCCC-
Q psy10611          4 YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFL-   82 (124)
Q Consensus         4 ~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~SG~-   82 (124)
                      +..|+-.-.+++-.+++.++||+.+++.+.+||-.|.|+|.+.++.|.+.+++.-|++|.++.++ +++-||=..+.|+ 
T Consensus       303 ~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFa-DGfRfGlGaEVGIS  381 (433)
T KOG4165|consen  303 FNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFA-DGFRFGLGAEVGIS  381 (433)
T ss_pred             hhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeeccccccc-ccccccccceeeee
Confidence            46678888999999999999999999999999999999999999999999999999999998775 6666764445444 


Q ss_pred             -CCCCcCcHHHHHhcceeeEEE
Q psy10611         83 -GENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        83 -G~~~~~G~~~l~~~~~~k~v~  103 (124)
                       +|-+.+|+.|++..+.+|.+.
T Consensus       382 T~rIHARGPvGveGLlttkw~l  403 (433)
T KOG4165|consen  382 TSRIHARGPVGVEGLLTTKWLL  403 (433)
T ss_pred             ccceeccCCccccceeeeeeEE
Confidence             566788999999999998654

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=96.80  E-value=0.0057  Score=44.97  Aligned_cols=55  Identities=25%  Similarity=0.356  Sum_probs=50.0

Q ss_pred             cceEEEEEeCCHHHHHHHHhcC--CCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCC
Q psy10611         10 GPVLVCLTVDTLDEAISIINKN--PYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI   65 (124)
Q Consensus        10 gPv~~v~~~~~~~eai~~~n~~--~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~   65 (124)
                      .+|+++..|++..||++++++-  +++ +.+||++..+.+..++.++++..++|||..
T Consensus       114 TgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~~~f~iNC~~  170 (215)
T PF07368_consen  114 TGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPCDTFYINCFN  170 (215)
T ss_pred             CeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCCCEEEEEecc
Confidence            4689999999999999999974  554 899999999999999999999999999964

The function of this family is unknown.

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=84.63  E-value=5  Score=32.46  Aligned_cols=80  Identities=18%  Similarity=0.241  Sum_probs=44.4

Q ss_pred             EEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCC--------CCCCCCccCCccCCCCC
Q psy10611         13 LVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIP--------VPLSMFSFTGSRGSFLG   83 (124)
Q Consensus        13 ~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~--------~~~~~~pfgG~~~SG~G   83 (124)
                      -.++.++|++||++++|..--=| ..|.++|+   +.+..+++ +|.|++...+.        ...+.+|-+|...    
T Consensus       289 g~ii~~~~l~ea~~~~N~~APEH-Lel~~~~~---~~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR----  360 (412)
T PF00815_consen  289 GAIIVVDSLEEAIELANEYAPEH-LELQVEDP---EELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGGTAR----  360 (412)
T ss_dssp             -EEEE-SSHHHHHHHHHHH--SE-EEEESTTH---HHHGGG--S-SEEEESTT--HHHHHHTSSS------TTGGG----
T ss_pred             CeEEEECCHHHHHHHHHHhhHHH-HHHHHcCH---HHHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCcccc----
Confidence            45788999999999999974443 35788887   45677775 89999997542        2234566666432    


Q ss_pred             CCCcCcHHHHHhcceeeEEE
Q psy10611         84 ENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        84 ~~~~~G~~~l~~~~~~k~v~  103 (124)
                         +.+.-+...|+...++.
T Consensus       361 ---~~sgLsv~~FlK~~s~~  377 (412)
T PF00815_consen  361 ---FSSGLSVDDFLKRISVQ  377 (412)
T ss_dssp             ---T---S-GGGGEEEEEEE
T ss_pred             ---ccCCCcHHHccceeeEE
Confidence               23555777787765544

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E

Probab=84.62  E-value=4.3  Score=32.58  Aligned_cols=79  Identities=20%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             EEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCCC--------CCCCCccCCccCCCCC
Q psy10611         13 LVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIPV--------PLSMFSFTGSRGSFLG   83 (124)
Q Consensus        13 ~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~~--------~~~~~pfgG~~~SG~G   83 (124)
                      -.++.++|++||++++|..--=|- .|.++|+..   +..+++ +|.|++-..+.-        ..+.+|.+|....   
T Consensus       276 g~ii~~~~~~eai~~~N~~APEHL-el~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~---  348 (390)
T cd06572         276 GAIILVDDLEEAIELANEYAPEHL-ELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARF---  348 (390)
T ss_pred             CEEEEECCHHHHHHHHHhhchhhh-eeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCCcceee---
Confidence            457889999999999999744432 477888754   666665 899999875321        2334666654332   


Q ss_pred             CCCcCcHHHHHhcceeeEE
Q psy10611         84 ENHFYGKQGFYFYTETKTV  102 (124)
Q Consensus        84 ~~~~~G~~~l~~~~~~k~v  102 (124)
                          .+.-+...|....++
T Consensus       349 ----~sgL~v~~F~K~~s~  363 (390)
T cd06572         349 ----YSGLSVDDFLKRITV  363 (390)
T ss_pred             ----cCCCCHHHheeccee
Confidence                344566777765543

C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.

>TIGR00069 hisD histidinol dehydrogenase

Probab=84.61  E-value=3.7  Score=33.01  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=51.3

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCCC--------CCCCCccCCccCCCCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIPV--------PLSMFSFTGSRGSFLGE   84 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~~--------~~~~~pfgG~~~SG~G~   84 (124)
                      .++.++|++||++++|..--=|- .|.++|+   +.+..+++ +|.|++...+..        ..+.+|-+|.     +|
T Consensus       273 ~ii~v~~l~ea~~~~N~~APEHL-el~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~G~-----Ar  343 (393)
T TIGR00069       273 AIILVDDLEEAIEISNDYAPEHL-ELQTKNP---EELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTGGT-----AR  343 (393)
T ss_pred             EEEEECCHHHHHHHHHhhChHhh-eehhCCH---HHHHhhcCccceeccCCCCchhhhhccCCCCcccCCCcc-----ee
Confidence            46789999999999999744432 3778887   44666665 899999765421        1234555553     32


Q ss_pred             CCcCcHHHHHhcceeeEEE
Q psy10611         85 NHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        85 ~~~~G~~~l~~~~~~k~v~  103 (124)
                        +.+.-+...|..+.++.
T Consensus       344 --~~sgL~v~~F~K~~s~~  360 (393)
T TIGR00069       344 --FYSGLSVLDFLKRITVQ  360 (393)
T ss_pred             --ecCCccHHHhccceeEE
Confidence              23555677777665543

This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.

>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed

Probab=83.69  E-value=4.3  Score=32.97  Aligned_cols=79  Identities=23%  Similarity=0.326  Sum_probs=51.6

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCCC--------CCCCCccCCccCCCCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIPV--------PLSMFSFTGSRGSFLGE   84 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~~--------~~~~~pfgG~~~SG~G~   84 (124)
                      .++.++|+|||++++|..--=|- .|.++|+   +.+..+++ +|.|++-..+..        ..+.+|-+|.     .|
T Consensus       304 ~iivv~~leeai~~~N~~APEHL-el~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT~G~-----AR  374 (425)
T PRK00877        304 AIILVDDLEEAIELSNAYAPEHL-EIQTEDP---RALLDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPTSGT-----AR  374 (425)
T ss_pred             EEEEECCHHHHHHHHHhhChHhe-eehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccCCCcc-----ee
Confidence            46789999999999999744433 4778887   44666665 899999764321        1233454443     33


Q ss_pred             CCcCcHHHHHhcceeeEEE
Q psy10611         85 NHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        85 ~~~~G~~~l~~~~~~k~v~  103 (124)
                        +.+.-+...|...-++.
T Consensus       375 --~~sgLsV~~F~K~~s~~  391 (425)
T PRK00877        375 --FSSGLSVYDFLKRSSVI  391 (425)
T ss_pred             --ecCCccHHHhccceeEE
Confidence              24555777777765543

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=83.13  E-value=3.2  Score=33.66  Aligned_cols=48  Identities=25%  Similarity=0.282  Sum_probs=36.9

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPI   65 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~   65 (124)
                      .|+-++|++||++++|..--=| ..|.++|+.   .+..+++ +|.|++...+
T Consensus       300 ~iilv~~l~ea~~~~N~~APEH-Lei~~~~p~---~~l~~I~nAGsIFlG~~s  348 (425)
T COG0141         300 AIILVDDLDEAVEISNEYAPEH-LELQTENPR---ELLGKIRNAGSIFLGHYS  348 (425)
T ss_pred             eEEEECCHHHHHHHHHhhChHh-hhhhhcCHH---HHHHHhcccceeeecCCC
Confidence            5788999999999999974333 247788874   4666675 8999999854

>PRK13770 histidinol dehydrogenase; Provisional

Probab=81.92  E-value=5.4  Score=32.31  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=51.6

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCCC--------CCCCCccCCccCCCCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIPV--------PLSMFSFTGSRGSFLGE   84 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~~--------~~~~~pfgG~~~SG~G~   84 (124)
                      .++.++|+|||++++|..--=|- .|.++|+   +.+...++ +|.|++...+..        ..+.+|-+|.     .|
T Consensus       294 ~ii~v~~~eeai~~~N~~APEHL-el~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----AR  364 (416)
T PRK13770        294 YLIHASNFDEACHVMNTIAPEHA-SIQTVNP---QPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNRT-----AR  364 (416)
T ss_pred             EEEEECCHHHHHHHHHhhChHhh-eehhCCH---HHHHhhCCEeceeccCCCCchhhhccccCCCCcCCCCcc-----ee
Confidence            46789999999999999744433 3778887   45667776 899999765421        2234555554     32


Q ss_pred             CCcCcHHHHHhcceeeEEE
Q psy10611         85 NHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        85 ~~~~G~~~l~~~~~~k~v~  103 (124)
                        +.+.-+...|....++.
T Consensus       365 --~~sgLsv~~FlK~~s~~  381 (416)
T PRK13770        365 --FTNGLSVNDFLTRNTVI  381 (416)
T ss_pred             --ccCCCcHHHeecceeeE
Confidence              23445677777765543

>PRK12447 histidinol dehydrogenase; Reviewed

Probab=81.06  E-value=6  Score=32.14  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=50.7

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCCC--------CCCCCccCCccCCCCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIPV--------PLSMFSFTGSRGSFLGE   84 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~~--------~~~~~pfgG~~~SG~G~   84 (124)
                      .++.++|++||++++|..--=|- .|.++|+   ..+..+++ +|.|++...+..        ..+.+|-+|.     +|
T Consensus       299 ~ii~v~~l~ea~~~~N~~APEHL-el~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----Ar  369 (426)
T PRK12447        299 EVILCDDLEEMVAEADRYASEHV-QVMTEDP---DWFLENMTNYGALFLGERTNVAYGDKVIGTNHVLPTSGA-----AR  369 (426)
T ss_pred             EEEEECCHHHHHHHHHhhChHhe-eehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccCCCcc-----ee
Confidence            46789999999999999744433 4778887   45667775 899999764321        2234555553     33


Q ss_pred             CCcCcHHHHHhcceeeEE
Q psy10611         85 NHFYGKQGFYFYTETKTV  102 (124)
Q Consensus        85 ~~~~G~~~l~~~~~~k~v  102 (124)
                        +.+.-+...|...-++
T Consensus       370 --~~sgLsv~~FlK~~s~  385 (426)
T PRK12447        370 --YTGGLWVGKFLKTVTY  385 (426)
T ss_pred             --ecCCCcHHHhccceeE
Confidence              2355566777765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		2e-23
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		9e-22
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		9e-10
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		3e-09
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		3e-09
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		3e-09
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		3e-09
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		3e-09
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-09
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		3e-09
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		4e-09
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		4e-09
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		7e-09
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		7e-09
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		9e-09
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		9e-09
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		1e-08
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		1e-08
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-08
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		3e-08
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		3e-08
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		3e-08
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		3e-08
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		3e-08
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		3e-08
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		9e-08
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		9e-08
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		9e-08
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-07
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		3e-07
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		3e-07
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-07
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		3e-07
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-07
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		4e-07
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		5e-07
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		5e-07
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		9e-07
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-06
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		2e-06
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		2e-06
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		2e-06
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		5e-06
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		1e-05
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-05
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-05
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-05
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-05
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-05
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		2e-05
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		4e-05
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		5e-05
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		6e-05
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		6e-05
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		3e-04
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		3e-04
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		3e-04
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		7e-04

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 66/103 (64%)
Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV 63
           YK EIFGPVL  +     +EA+S+  K+ YGNG AI+T +G  AR F+  I+ G VG+NV
Sbjct: 403 YKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXVGVNV 462
Query: 64  PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 106
           PIPVPL+  SF G + S  G+ + +G     F+T TKT+T  W
Sbjct: 463 PIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 63/110 (57%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  +K+EIF PVL  + V  L EAI I NK+ + NG  +FT+N    R F + ID G +G
Sbjct: 375 MTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 110
           IN+ +P P++ F F+G + SF G  H  GK    FYT  K VT  +   D
Sbjct: 435 INLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPD 484

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ +KEE+FGPVL   T  + DEAI++ N   YG   A+F+N+     + ++ ++ G V 
Sbjct: 384 MQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVW 443
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           +N   P       + G + S  G     G+ G   Y   K VTQ
Sbjct: 444 VNCSQPC-FVQAPWGGIKRSGFGRE--LGEWGIQNYLNIKQVTQ 484

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GQELGE---YGLQA---YTEVKTVT 492

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 492

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 492

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 492

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 492

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 492

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 387 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 446
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 447 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQA---YTEVKTVT 486

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   +++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 392 MTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVW 451
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N         P   +  +GS G  LGE   YG Q    YTE KTVT
Sbjct: 452 VNCYDVFGAQSPFGGYKLSGS-GRELGE---YGLQA---YTEVKTVT 491

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV   +   +LD+ I   N   YG    IFTN+   A   S  +  G V 
Sbjct: 394 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453
Query: 61  IN----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N    V    P   F  +G+ G  LGE       GF+ YTE KTVT
Sbjct: 454 VNCYSVVSAQCPFGGFKMSGN-GRELGE------YGFHEYTEVKTVT 493

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  +EEIFGPVLV +     +EA+   N   YG    +FT +   A + + E++ G V 
Sbjct: 403 MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVY 462
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           +N      +P P     F G +GS  G+    G     FYT+ KT+
Sbjct: 463 LNSHNVRHLPTP-----FGGVKGS--GDRREGGTYALDFYTDLKTI 501

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  +  DT ++AI+I N + YG   +++T +     K SQ+I  G  G
Sbjct: 381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG 440
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P S   F G + S +G  +  G +G   +T+ K+V
Sbjct: 441 INWYAFDPGS--PFGGYKNSGIGREN--GPEGVEHFTQQKSV 478

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE+FGPVL      T DEAI + N   YG   A+ + +    ++ S+EID G + 
Sbjct: 404 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIW 463
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           +N   P       + G++ S  G     G+ G   Y   K VT+
Sbjct: 464 VNCSQPC-FCQAPWGGNKRSGFGRE--LGEGGIDNYLSVKQVTE 504

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M C KEEIFGPV+  L  DT +E +   N   +G  + +FT + + A + +  ++ G   
Sbjct: 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCY 453
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P+ VP   +  +G    F  EN   G+    +Y++ KTV
Sbjct: 454 INTYSISPVEVPFGGYKMSG----FGREN---GQATVDYYSQLKTV 492

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE+FGPVL   T  T +EAI++ N   YG G+A+ +N+     + S+ +  G V 
Sbjct: 387 MQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVW 446
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           IN   P  +    + G + S  G     G+ G   Y   K VT+
Sbjct: 447 INCAQPSFIQA-PWGGIKRSGFGRE--LGEWGLENYLSVKQVTR 487

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ +KEE+FGPVL   T  T ++AI + N   YG G A+ + +     +F++    G + 
Sbjct: 401 MEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIW 460
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           IN   P   +   + G + S  G +   GK G   +   K VT+
Sbjct: 461 INCSQPT-FNELPWGGKKRSGFGRD--LGKWGLENFLNIKQVTE 501

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ +KEE+FGPVL   T  T ++AI + N   YG G A+ + +     +F++    G + 
Sbjct: 401 MEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIW 460
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           IN   P   +   + G + S  G +   GK G   +   K VT+
Sbjct: 461 INCSQPT-FNELPWGGKKRSGFGRD--LGKWGLENFLNIKQVTE 501

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE+FGPVL   T  T +EAI + N   YG G A+ +N+     + ++    G V 
Sbjct: 387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVW 446
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 108
           +N   P   +   + G + S  G     G+ G   Y   K VTQ   E
Sbjct: 447 VNCSQPC-FTQAPWGGVKRSGFGRE--LGEWGLDNYLSVKQVTQYISE 491

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G++ S  G
Sbjct: 431 INNKTQRGTDNFPFLGAKKSGAG 453

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G++ S  G
Sbjct: 431 INNKTQRGTDNFPFLGAKKSGAG 453

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G++ S  G
Sbjct: 431 INNKTQRGTDNFPFLGAKKSGAG 453

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G++ S  G
Sbjct: 431 INNKTQRGTDNFPFLGAKKSGAG 453

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPVL  +  DTL+EAIS+ N + YG  ++I+T N   A K  + +  G+  
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN      +  F   G R S +G     GK G + Y +T+ V
Sbjct: 437 INRENFEAMQGFH-AGWRKSGIGGAD--GKHGLHEYLQTQVV 475

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPVL  +  DTL++AIS+ N + YG  ++I+T N   A K  + +  G+  
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN      +  F   G R S +G     GK G + Y +T+ V
Sbjct: 437 INRENFEAMQGFH-AGWRKSGIGGAD--GKHGLHEYLQTQVV 475

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPVL  +  DTL++AIS+ N + YG  ++I+T N   A K  + +  G+  
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN      +  F   G R S +G     GK G + Y +T+ V
Sbjct: 437 INRENFEAMQGFH-AGWRKSGIGGAD--GKHGLHEYLQTQVV 475

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV   L   T+DE I   N + +G   A+FTN+   A   S  +  G V 
Sbjct: 392 MRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVW 451
Query: 61  IN----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN    +    P   F  +G+ G  +GE       G   Y+E KTVT
Sbjct: 452 INCYNALNAQSPFGGFKMSGN-GREMGEF------GLREYSEVKTVT 491

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPVL  LT  T DEA+++ N   +G   ++++ N  TA +  + I  G+  IN  
Sbjct: 400 REEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSV 459
Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           I     +    G + S LG     G+ GF  Y++ K V
Sbjct: 460 IDGTPEL-PIGGYKKSGLGRE--LGRYGFDEYSQFKGV 494

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DE ++  N   +G    +FT + A A +    ++ G + 
Sbjct: 386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW 445
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P+ +P     F GS+ S  G  +         Y+E KTV
Sbjct: 446 INTYNLCPVEIP-----FGGSKQSGFGREN--SAAALEHYSELKTV 484

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV   +   +LDE I   N   YG    +FT +   A   S  +  G V 
Sbjct: 394 MRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVW 453
Query: 61  INVPIPV----PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 110
           +N  +      P   F  +G  G  +GE       G + YTE KTVT    E +
Sbjct: 454 VNCYLAASAQSPAGGFKMSG-HGREMGE------YGIHEYTEVKTVTMKISEKN 500

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGF 93
           +N         P   +  +GS G  LGE   YG Q +
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQAY 485

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           +EEIFGPV   +T + LDEAI I N   YG    +   +  T  K ++ I+ G V IN  
Sbjct: 380 QEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA 439
Query: 65  IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 107
              P     F G + S LG    +G  G   + E K++   ++
Sbjct: 440 GRKP--DLPFGGYKQSGLGRE--WGDYGIEEFLEVKSIAGYFK 478

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452
Query: 61  INV----PIPVPLSMFSFTGSRGSFLGENHFYGKQGF 93
           +N         P   +  +GS G  LGE   YG Q +
Sbjct: 453 VNCYDVFGAQSPFGGYKMSGS-GRELGE---YGLQAY 485

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V   +EAIS+ N++ YG   +IFT +   A    + ++ G V 
Sbjct: 380 MRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVH 439
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN         F F G + S LG
Sbjct: 440 INAKTERGPDHFPFLGVKKSGLG 462

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EEIFGPVL  L  +T DEA+++ N   YG    I + + +  R+ + ++  G V 
Sbjct: 397 MRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVE 456
Query: 61  IN 62
           +N
Sbjct: 457 VN 458

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-V 63
           +EEIFGPVL  + V +L+EAI  IN+        +F++N    +K   E   G V  N V
Sbjct: 348 QEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDV 407
Query: 64  PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 101
            + + L    F G   S +G  H  GK+ F  ++  ++
Sbjct: 408 IVHITLHSLPFGGVGNSGMGSYH--GKKSFETFSHRRS 443

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-- 62
           +EEIFGPV+  + V +L+EAI  IN+        +F+NN    +K   E   G V  N  
Sbjct: 331 QEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDV 390
Query: 63  -VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 101
            V I VP   F   G+ G  +G   ++GK+ F  ++  ++
Sbjct: 391 IVHITVPTLPFGGVGNSG--MGA--YHGKKSFETFSHRRS 426

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 3   CYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           CY+EE FGP++      T +E I   N   +G  + +FT +   A++ +  +  G VG N
Sbjct: 384 CYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWN 443
Query: 63  VPI-PVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRES 109
               P P +   F G + S +G     G +G + + E +TV + + E+
Sbjct: 444 TGTGPTPEA--PFGGXKASGIGREG--GLEGLFEFVEAQTVPRGFAEN 487

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK E+F PV + + V  LD+AI + N  PYG   A+F  +    R+  + ++ G + 
Sbjct: 389 MVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448
Query: 61  INVPIPVPLSMFSFTGSRGS 80
           IN      +  + F G + S
Sbjct: 449 INDMPRHGIGYYPFGGRKKS 468

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK E+F PV + + V  LD+AI + N  PYG   A+F  +    R+  + ++ G + 
Sbjct: 389 MVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448
Query: 61  INVPIPVPLSMFSFTGSRGS 80
           IN      +  + F G + S
Sbjct: 449 INDMPRHGIGYYPFGGRKKS 468

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EE+FGPV+     +T  EAI + N + YG   A+F+ +   A++ + ++  G V 
Sbjct: 408 MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVW 467
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN   P   +   + G + S +G     GK+G   Y  +K +
Sbjct: 468 INDFHPY-FAQAPWGGYKQSGIGRE--LGKEGLEEYLVSKHI 506

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK E+F PV   + V  LD+AI + N  PYG   A+F  +    R+  + ++ G + 
Sbjct: 389 MVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448
Query: 61  INVPIPVPLSMFSFTGSRGS 80
           IN      +  + F G + S
Sbjct: 449 INDMPRHGIGYYPFGGRKKS 468

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGP++  L  D    A  + N + +G   A+++ +   A +F+ +ID G V 
Sbjct: 382 MEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVH 441
Query: 61  INVPIPVPLSMFSFTGSRGSFLG 83
           IN           F GS+ S LG
Sbjct: 442 INDLTVNDEPHVMFGGSKNSGLG 464

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DEAI   N   YG    + T + A A +    ++ G   
Sbjct: 381 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P  M    G + S +G  +  G      YT  K+V
Sbjct: 441 INTWGESPAEM-PVGGYKQSGVGREN--GLTTLAHYTRIKSV 479

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DEAI   N   YG    + T + A A +    ++ G   
Sbjct: 381 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P  M    G + S +G  +  G      YT  K+V
Sbjct: 441 INTWGESPAEM-PVGGYKQSGVGREN--GLTTLAHYTRIKSV 479

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DEAI   N   YG    + T + A A +    ++ G   
Sbjct: 380 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 439
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P  M    G + S +G  +  G      YT  K+V
Sbjct: 440 INTWGESPAEM-PVGGYKQSGVGREN--GLTTLAHYTRIKSV 478

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DEAI   N   YG    + T + A A +    ++ G   
Sbjct: 380 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 439
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P  M    G + S +G  +  G      YT  K+V
Sbjct: 440 INTWGESPAEM-PVGGYKQSGVGREN--GLTTLAHYTRIKSV 478

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DEAI   N   YG    + T + A A +    ++ G   
Sbjct: 381 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN     P  M    G + S +G  +  G      YT  K+V
Sbjct: 441 INTWGESPAEM-PVGGYKQSGVGREN--GLTTLAHYTRIKSV 479

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEE FGP+      DT +E I+  N   +G     +T N + A + S+ ++ G VG
Sbjct: 400 MLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG 459
Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 107
            N  + +   +  F G + S LG      K G   Y ETK +   ++
Sbjct: 460 HNTGL-ISNEVAPFGGVKQSGLGREG--SKYGIEEYLETKYICSAYK 503

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
           K  + E+F P+   +   +  EAI + N   YG  +A+FT++     KF+ +ID G   +
Sbjct: 376 KIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHV 435
Query: 62  NVPIPVPLSMFSFTGSRGSFLG 83
           N          +F G++ S +G
Sbjct: 436 NDQSVNDSPNIAFGGNKASGVG 457

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
           K   EE FGP+        ++EA+ + N   YG   A+F  +   A K +++++ G + I
Sbjct: 359 KVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISI 418
Query: 62  NVPIPVPL------SMFSFTGSRGSFLGE---NHFYGKQGFYFYTETKT 101
           N             + F+F+G  GS +G      F  KQ F   T + +
Sbjct: 419 NDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTS 467

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI 65
           EE FGP+L  + V ++++AI   N + YG    + T + A   +   +++ G+V IN  +
Sbjct: 391 EETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGM 450
Query: 66  PVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
                 F     +  F GE+   GK G   Y E KTV
Sbjct: 451 GEQHQGFHNGWKQSGFGGED---GKFGLEQYLEKKTV 484

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 2   KCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGI 61
           +  +EEIFGPV+    V + DEA+ + N   YG   A+ T N     +  QE   G +  
Sbjct: 412 RLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYF 471
Query: 62  N 62
           N
Sbjct: 472 N 472

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVP 64
           K E F PV+  +  +  +E I I N   YG  +AIFTN+   + KF++ ++ G V IN  
Sbjct: 366 KTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDS 424
Query: 65  IPVPLSMFSFTGSRGSFLG 83
                    F G + S LG
Sbjct: 425 SLFRQDNMPFGGVKKSGLG 443

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN-- 62
           +EEIFGPV+     +  D A+ I N   YG   A+ T N A   +  +E   G +  N  
Sbjct: 415 QEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRN 474
Query: 63  ----VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRES 109
               +    P   F  +G+     G ++         + + KTV++++ E+
Sbjct: 475 CTGAIVGYHPFGGFKMSGTDSKAGGPDY------LALHMQAKTVSEMYAEN 519

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
           + +E+FGP+     V+  + AI + N + YG G+++  ++   A+K S +I+ G   IN
Sbjct: 359 FDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVIN 417

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV 63
           +++E+FGPV           A+++ N + +G    IFT +   A + +  ++CG V IN 
Sbjct: 362 FRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN- 420
Query: 64  PIPVPLSMFSFTGSRGSFLGE--NHFYGKQGFYFYTETKTV 102
                 +  +F G + S  G   +HF    G + +   +TV
Sbjct: 421 GYSASDARVAFGGVKKSGFGRELSHF----GLHEFCNVQTV 457

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	7e-76
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	9e-73
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	8e-23
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	3e-22
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-21
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	3e-21
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	5e-21
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	6e-21
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	7e-21
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	7e-21
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	7e-21
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-20
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	1e-20
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-20
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	2e-20
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-20
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	2e-20
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	2e-20
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-20
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-20
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	6e-20
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-19
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	3e-19
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	3e-19
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	4e-19
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-18
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-18
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	2e-17
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	3e-17
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	7e-17
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-16
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-14
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	5e-14
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	9e-14
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-13
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	2e-13
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	2e-13
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	3e-13
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	3e-13
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	3e-13
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	4e-13
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	1e-12
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	6e-10
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-08
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	7e-08
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	9e-08
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	2e-07
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	2e-07
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	9e-05

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  232 bits (594), Expect = 7e-76
 Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK EIFGPVL  +     +EA+S+  K+ YGNG AI+T +G  AR F+  I+ G VG
Sbjct: 400 MDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVG 459

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSM 120
           +NVPIPVPL+  SF G + S  G+ + +G     F+T TKT+T  W         A  S+
Sbjct: 460 VNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWPSG--IKDGAEFSI 517

Query: 121 PVMQ 124
           P M+
Sbjct: 518 PTMR 521

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  223 bits (571), Expect = 9e-73
 Identities = 47/111 (42%), Positives = 63/111 (56%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  +K+EIF PVL  + V  L EAI I NK+ + NG  +FT+N    R F + ID G +G
Sbjct: 375 MTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDV 111
           IN+ +P P++ F F+G + SF G  H  GK    FYT  K VT  +   D 
Sbjct: 435 INLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPDF 485

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 91.1 bits (227), Expect = 8e-23
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           MK  +EEIFGPVLV +     +EA+   N   YG    +FT +   A + + E++ G V 
Sbjct: 403 MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVY 462

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N      +P P     F G +GS    E   Y      FYT+ KT+ 
Sbjct: 463 LNSHNVRHLPTP-----FGGVKGSGDRREGGTY---ALDFYTDLKTIA 502

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 89.2 bits (222), Expect = 3e-22
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EEIFGP++  L  D    A  + N + +G   A+++ +   A +F+ +ID G V 
Sbjct: 382 MEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVH 441

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN           F GS+ S LG   F G      +T  + + 
Sbjct: 442 INDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWIG 482

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 87.2 bits (217), Expect = 2e-21
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EEIFGPVL  L  +T DEA+++ N   YG    I + + +  R+ + ++  G V 
Sbjct: 397 MRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVE 456

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N       S   F G + S    E    G  G   + +TK ++
Sbjct: 457 VNGHELPGGS--YFGGVKFSGRARE---GGLWGIKEFLDTKAIS 495

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 86.4 bits (215), Expect = 3e-21
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  +T + LDEAI I N   YG    +   +  T  K ++ I+ G V 
Sbjct: 376 MTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE 435

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN     P     F G + S LG E   +G  G   + E K++ 
Sbjct: 436 INEAGRKPDL--PFGGYKQSGLGRE---WGDYGIEEFLEVKSIA 474

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 86.1 bits (214), Expect = 5e-21
 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPV+  L  D  DE ++  N   +G    +FT + A A +    ++ G + 
Sbjct: 386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW 445

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN     P+ +P     F GS+ S  G EN          Y+E KTV 
Sbjct: 446 INTYNLCPVEIP-----FGGSKQSGFGREN---SAAALEHYSELKTVY 485

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score = 85.7 bits (213), Expect = 6e-21
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V   +EAIS+ N++ YG   +IFT +   A    + ++ G V 
Sbjct: 380 MRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVH 439

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
           IN         F F G + S LG +     K      T  +  
Sbjct: 440 INAKTERGPDHFPFLGVKKSGLGVQG---IKPSLLSMTRERVT 479

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 85.7 bits (213), Expect = 7e-21
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  +  DT ++AI+I N + YG   +++T +     K SQ+I  G  G
Sbjct: 381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG 440

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN     P S   F G + S +G E    G +G   +T+ K+V 
Sbjct: 441 INWYAFDPGS--PFGGYKNSGIGRE---NGPEGVEHFTQQKSVL 479

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score = 85.7 bits (213), Expect = 7e-21
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 12/109 (11%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               +EEIFGPV+     +  D A+ I N   YG   A+ T N A   +  +E   G + 
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470

Query: 61  INVPIP------VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
            N           P     F G + S        G      + + KTV+
Sbjct: 471 FNRNCTGAIVGYHP-----FGGFKMSGTDSKA-GGPDYLALHMQAKTVS 513

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 85.3 bits (212), Expect = 7e-21
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M C KEEIFGPV+  L  DT +E +   N   +G  + +FT + + A + +  ++ G   
Sbjct: 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCY 453

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN     P+ VP     F G + S  G EN   G+    +Y++ KTV 
Sbjct: 454 INTYSISPVEVP-----FGGYKMSGFGREN---GQATVDYYSQLKTVI 493

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN         F F G++ S  G +     K      T  K+V 
Sbjct: 431 INNKTQRGTDNFPFLGAKKSGAGIQG---VKYSIEAMTTVKSVV 471

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   +EEIFGPVL  LT  T DEA+++ N   +G   ++++ N  TA +  + I  G+  
Sbjct: 396 MSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN        +P       G + S LG E    G+ GF  Y++ K V 
Sbjct: 456 INSVIDGTPELP-----IGGYKKSGLGREL---GRYGFDEYSQFKGVH 495

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 84.5 bits (210), Expect = 2e-20
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+ ++EE+FGPVL   T  T +EAI + N   YG G A+ +N+     + ++    G V 
Sbjct: 387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVW 446

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVTQ 104
           +N   P       + G + S  G E    G+ G   Y   K VTQ
Sbjct: 447 VNCSQPCFTQA-PWGGVKRSGFGREL---GEWGLDNYLSVKQVTQ 487

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 84.5 bits (210), Expect = 2e-20
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            +  + E+FGPV+        D+A++  N + YG  ++++T + + A + +  +  G   
Sbjct: 395 DEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTW 454

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN    +   M    G + S  G +   Y       YT  + + 
Sbjct: 455 INTHFMLTNEM-PHGGIKQSGYGKDMSVY---ALEDYTAVRHIM 494

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV   +   +LD+ I   N   YG    IFTN+   A   S  +  G V 
Sbjct: 394 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N    V    P     F G + S  G E    G+ GF+ YTE KTVT
Sbjct: 454 VNCYSVVSAQCP-----FGGFKMSGNGREL---GEYGFHEYTEVKTVT 493

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               ++E+FGPV+     D  ++ ++  N + YG  ++++T +   A + S  +  G   
Sbjct: 393 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N    +   M    G + S  G +   Y   G   YT  + V 
Sbjct: 453 VNTHFMLVSEM-PHGGQKLSGYGKDMSLY---GLEDYTVVRHVM 492

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  +EE+FGPV+     +T  EAI + N + YG   A+F+ +   A++ + ++  G V 
Sbjct: 408 MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVW 467

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVTQ 104
           IN   P       + G + S +G E    GK+G   Y  +K +  
Sbjct: 468 INDFHPYFAQA-PWGGYKQSGIGREL---GKEGLEEYLVSKHILT 508

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452

Query: 61  IN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N         P     F G + S  G E    G+ G   YTE KTVT
Sbjct: 453 VNCYDVFGAQSP-----FGGYKMSGSGREL---GEYGLQAYTEVKTVT 492

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score = 82.6 bits (205), Expect = 6e-20
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            +  +EEIFGPVL  + V    EA+ + N  PYG    +++          +E   G + 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470

Query: 61  INVPIP---VPLSMF-----SFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
            N  I    V +  F     S T ++    G            + E K V 
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAK---TG-----ALDYLRLFLEMKAVA 513

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 81.5 bits (202), Expect = 2e-19
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK E+F PV + + V  LD+AI + N  PYG   A+F  +    R+  + ++ G + 
Sbjct: 389 MVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN      +  + F G + S +  E            T  KT+ 
Sbjct: 449 INDMPRHGIGYYPFGGRKKSGVFREG---IGYAVEAVTAYKTIV 489

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 81.1 bits (201), Expect = 3e-19
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 1   MKCYKEEIFGPVLVCLT--VDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQ 58
           M   KEE FGP+++        +D  +S  N   +G  + +FT +   A   S ++  G 
Sbjct: 413 MYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGT 472

Query: 59  VGIN----VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           V IN      +  P     F G + S  G +    G+     Y   KTVT
Sbjct: 473 VFINTYNKTDVAAP-----FGGFKQSGFGKDL---GEAALNEYLRIKTVT 514

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 81.1 bits (201), Expect = 3e-19
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            K  + E+F P+   +   +  EAI + N   YG  +A+FT++     KF+ +ID G   
Sbjct: 375 SKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTH 434

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N          +F G++ S +G   F        +T TK ++
Sbjct: 435 VNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWIS 475

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score = 80.3 bits (199), Expect = 4e-19
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKF--SQEIDCGQ 58
                 E F P+L        +E  +  N+   G  ++IFT +     ++   +  DCG 
Sbjct: 394 ASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGI 453

Query: 59  VGINVP-----IPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           V +N+P     I        F G + +  G E+   G   +  Y    T T
Sbjct: 454 VNVNIPTSGAEIGGA-----FGGEKHTGGGRES---GSDAWKQYMRRSTCT 496

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  +++E+FGPV           A+++ N + +G    IFT +   A + +  ++CG V 
Sbjct: 359 MTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVF 418

Query: 61  INVPIP----VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN        V      F G + S  G        G + +   +TV
Sbjct: 419 INGYSASDARVA-----FGGVKKSGFGREL--SHFGLHEFCNVQTV 457

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 78.3 bits (194), Expect = 2e-18
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 11/106 (10%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
              + +E+FGP+     V+  + AI + N + YG G+++  ++   A+K S +I+ G   
Sbjct: 356 NPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTV 415

Query: 61  INVPIP----VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           IN        +P     F G + S  G        G   +     V
Sbjct: 416 INGRWITSGELP-----FGGIKKSGYGREL--SGLGLMAFVNEHLV 454

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               K E F PV+  +  +  +E I I N   YG  +AIFTN+   + KF++ ++ G V 
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN           F G + S LG E     K      +  KT+ 
Sbjct: 421 INDSSLFRQDNMPFGGVKKSGLGREG---VKYAMEEMSNIKTII 461

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 75.4 bits (186), Expect = 3e-17
 Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 19/120 (15%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLD--------EAISIINKNPYGNGTAIFTNNGATARKFSQ 52
              +  E+FGPV                   A+++  +       +I++N+ A   + + 
Sbjct: 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLAL 456

Query: 53  EIDCGQVGINVPIP----------VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 102
           E+      ++   P            + M    G   +  GE    G +   FY     +
Sbjct: 457 ELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEEL-GGLRALAFYHRRSAI 515

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 74.1 bits (183), Expect = 7e-17
 Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 4/101 (3%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            +   EE FGP+L  +       AI   N   YG    + +++     +F  E   G V 
Sbjct: 374 AERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVN 433

Query: 61  INVPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETK 100
            N  +    S   F G   S     +         +     
Sbjct: 434 WNKQLTGAASSAPFGGIGASGNHRPS---AYYAADYCAYPV 471

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 72.2 bits (178), Expect = 3e-16
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 13/107 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M    EE FGPVL  +  DTL++AIS+ N + YG  ++I+T N   A K  + +  G+  
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTV 102
           IN                 G R S +G  +   GK G + Y +T+ V
Sbjct: 437 INRENFEAMQGF-----HAGWRKSGIGGAD---GKHGLHEYLQTQVV 475

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 12/109 (11%)

Query: 1    MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
             +  +EEIFGPVL  +     D+AI   N   +     IF+ +     K  +E   G + 
Sbjct: 905  HRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLY 964

Query: 61   INVPI--PVPLSMFSFTGSRGSFLGENHFYGKQG----FYFYTETKTVT 103
            IN      +      F G+R S +G      K G       + + + VT
Sbjct: 965  INRNNTGALVERQ-PFGGARMSGVG-----TKAGGPDYLLHFMDPRVVT 1007

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 66.0 bits (162), Expect = 5e-14
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
                EE FGP+L  + V ++++AI   N + YG    + T + A   +   +++ G+V 
Sbjct: 386 NIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVY 445

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN  +              G + S  G E+   GK G   Y E KTV 
Sbjct: 446 INRGMGEQHQGF-----HNGWKQSGFGGED---GKFGLEQYLEKKTVY 485

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 65.0 bits (159), Expect = 9e-14
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 20/122 (16%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNG--ATARKFSQEID--C 56
              ++EEIFGP  + +  + + + +S+           I           +    ++   
Sbjct: 371 HPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIA 430

Query: 57  GQVGIN-VPIPVPLS-------MF-SFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 107
           G++  N  P  V +         + + T S  + +G       +  + +       Q   
Sbjct: 431 GRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGA------EAIHRWLRPVAY-QALP 483

Query: 108 ES 109
           ES
Sbjct: 484 ES 485

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M C  EE FGP+   +  DT +EAI+I N    G     ++ + A   + +++++ G VG
Sbjct: 384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVG 443

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           +N  +      P     F G + S LG E     K G   Y E K V 
Sbjct: 444 VNEGLISSVECP-----FGGVKQSGLGREG---SKYGIDEYLELKYVC 483

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 13/112 (11%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEE FGP+      DT +E I+  N   +G     +T N + A + S+ ++ G VG
Sbjct: 400 MLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG 459

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVTQLWR 107
            N  +      P     F G + S LG E     K G   Y ETK +   ++
Sbjct: 460 HNTGLISNEVAP-----FGGVKQSGLGREG---SKYGIEEYLETKYICSAYK 503

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            K  KEE FGP+          + I+  N   +G     +  + +   +  + ++ G VG
Sbjct: 379 AKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG 438

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN  I      P     F G + S LG E     K G   Y E K + 
Sbjct: 439 INTGIISNEVAP-----FGGIKASGLGREG---SKYGIEDYLEIKYMC 478

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 5   KEEIFGPVLVCLTVDTLDEAISIINKNP-----YGNGTAIFTNNGATARKFSQEIDCGQV 59
           +EEIFGPVL  + V +L+EAI  IN+       Y     +F++N    +K   E   G V
Sbjct: 348 QEEIFGPVLPIVCVRSLEEAIQFINQREKPLALY-----MFSSNDKVIKKMIAETSSGGV 402

Query: 60  GIN 62
             N
Sbjct: 403 AAN 405

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGT----AIFTNNGATARKFSQEIDCGQV 59
           Y  E   P+L   T +T  EA  +     Y  G      I + +    R+F+ +    ++
Sbjct: 338 YSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRL 397

Query: 60  GINVP 64
            +N P
Sbjct: 398 LVNTP 402

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEE FGP+       + +E + + N   +G    +++ +     + ++ ++ G VG
Sbjct: 382 MDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVG 441

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
           IN  +      P     F G + S LG E       G   Y   K + 
Sbjct: 442 INTGLISNEVAP-----FGGVKQSGLGREG---SHYGIDDYVVIKYLC 481

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M CY+EE FGP++      T +E I   N   +G  + +FT +   A++ +  +  G VG
Sbjct: 382 MCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVG 441

Query: 61  INVPIP----VPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTETKTVT 103
            N         P     F G + S +G E    G +G + + E +TV 
Sbjct: 442 WNTGTGPTPEAP-----FGGMKASGIGREG---GLEGLFEFVEAQTVP 481

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 62.1 bits (151), Expect = 1e-12
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 5   KEEIFGPVLVCLTV--DTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGIN 62
            EE+FGP+L  +    + L+  +  I +  YG    + +    +       +  G + +N
Sbjct: 884 TEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVN 943

Query: 63  VPI--PVPLSMFSFTGSRGSFLGENHFYGKQG----FYFYTETKTVT 103
             +   V      F G+  S  G      K G       +   +TVT
Sbjct: 944 RNMIGAVVGVQ-PFGGNGLSGTG-----PKAGGPHYLARFATEQTVT 984

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 6   EEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNG--ATARKFSQ--EIDCGQVGI 61
           EE+FGP+ + + V +  E   +           I  + G   TAR+     E   G+V +
Sbjct: 411 EEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLV 470

Query: 62  NVP 64
           N  
Sbjct: 471 NGF 473

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 6   EEIFGPVLVCLTVDTLDEAI----SIINKNPYGNGTAIFTN---NGATARKFSQEIDCGQ 58
            E   P L     D  ++A+    +++     G+ + ++TN   N    R F  ++   +
Sbjct: 335 HEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTAR 394

Query: 59  VGINVP 64
           + IN+P
Sbjct: 395 ILINIP 400

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 Length = 427

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNG--TAIFTNNGATARKFSQEIDCGQVGI 61
           +  E    ++    V  +DEAI  I K  Y  G   +I T N + A+KF  EID   V +
Sbjct: 319 WPTEYLDLIIAIKVVKNVDEAIEHIKK--YSTGHSESILTENYSNAKKFVSEIDAAAVYV 376

Query: 62  N 62
           N
Sbjct: 377 N 377

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} Length = 463

 Score = 48.0 bits (115), Expect = 9e-08
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNG-T-AIFTNNGATARKFSQEIDCGQVGI 61
            + E     L    VD + +AI  I+K  YG+  T  I T +  TA  F Q +D   V  
Sbjct: 332 LRTEYGDLELCIEVVDNVQDAIDHIHK--YGSSHTDVIVTEDENTAEFFLQHVDSACVFW 389

Query: 62  N 62
           N
Sbjct: 390 N 390

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 Length = 468

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNG-T-AIFTNNGATARKFSQEIDCGQVGI 61
           + +E     L    V + + AI  IN   + +  T AI T N A A KF + +D   V  
Sbjct: 337 FDKEFLSLDLAAKFVTSTESAIQHINT--HSSRHTDAIVTENKANAEKFMKGVDSSGVYW 394

Query: 62  N 62
           N
Sbjct: 395 N 395

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKN-PYGNGTAIFTNNGATARKFSQEIDCGQV 59
                EE+FGP+L  L  D++  AI  +NK+ P      +F  +   A+    +I  G  
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDA 411

Query: 60  GIN 62
            +N
Sbjct: 412 QVN 414

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 39.6 bits (93), Expect = 9e-05
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 5   KEEIFGPVLVCLTV--DTLDEAISIINK-NPYGNGTAIFTNNGATARKFSQEI 54
           KEEIFGPVL       D   E + +++    YG   A+F  + A  ++ ++ +
Sbjct: 445 KEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRML 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.97
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	99.97
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.96
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.96
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.96
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.96
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.95
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.95
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.95
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.95
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.95
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.95
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.95
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.95
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.95
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.95
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.95
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.95
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.95
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.95
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.95
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.95
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.95
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.95
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	99.95
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.95
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.95
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.95
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.95
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.95
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	99.95
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	99.95
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.95
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.95
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.95
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.95
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.95
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.95
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.95
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.94
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.94
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.94
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.93
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	99.93
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.93
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.93
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.92
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.92
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.91
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.91
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.86
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.64
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	86.0

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=99.97  E-value=1.3e-30  Score=208.96  Aligned_cols=104  Identities=30%  Similarity=0.363  Sum_probs=97.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       381 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PFGG~k~S  459 (490)
T 2wme_A          381 MTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQS  459 (490)
T ss_dssp             SHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGG
T ss_pred             ChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC-CCCCCccccccc
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 467999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++|+++|++.|+|++++.
T Consensus       460 G~Gre--~G~~gl~~ft~~K~v~i~~g  484 (490)
T 2wme_A          460 GVGRE--NGLTTLAHYTRIKSVQVELG  484 (490)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEECS
T ss_pred             ccCch--hHHHHHHHhhceeEEEEECC
Confidence            99976  79999999999999999875

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=99.97  E-value=5.6e-30  Score=204.23  Aligned_cols=108  Identities=30%  Similarity=0.406  Sum_probs=99.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ...+.+||||+|.
T Consensus       344 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~  423 (469)
T 3sza_A          344 SPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGN  423 (469)
T ss_dssp             SGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGG
T ss_pred             chhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccc
Confidence            689999999999999999999999999999999999999999999999999999999999999752 3457889999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEeccCcc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWRESD  110 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~~~~  110 (124)
                      ||+|++  +|.+|+++|++.|+|+++..+.+
T Consensus       424 SG~Gr~--~G~~g~~~ft~~K~v~~~~~~~~  452 (469)
T 3sza_A          424 SGMGSY--HGKKSFETFSHRRSCLVRPLMND  452 (469)
T ss_dssp             GEECCB--STHHHHHHTEEEEEEEECCSSCC
T ss_pred             cccCcc--chHHHHHHhhCeeEEEECCcccc
Confidence            999975  79999999999999998765433

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.96  E-value=3.5e-29  Score=201.16  Aligned_cols=106  Identities=31%  Similarity=0.398  Sum_probs=98.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       380 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~S  459 (505)
T 3prl_A          380 MRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKS  459 (505)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETT
T ss_pred             ChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcC
Confidence            67899999999999999999999999999999999999999999999999999999999999986544578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRE  108 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~  108 (124)
                      |+|++  +|++++++|++.|+|++++..
T Consensus       460 G~Gr~--~g~~~~~~f~~~k~v~~~~~~  485 (505)
T 3prl_A          460 GLGVQ--GIKPSLLSMTRERVTVLNLAE  485 (505)
T ss_dssp             EESCB--SHHHHHHHTEEEEEEEEEC--
T ss_pred             CCCcC--ccHHHHHHhhceEEEEEeCCC
Confidence            99975  799999999999999987753

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.5e-29  Score=202.74  Aligned_cols=108  Identities=46%  Similarity=0.810  Sum_probs=99.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       400 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~S  479 (521)
T 4e4g_A          400 MDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSS  479 (521)
T ss_dssp             SHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETT
T ss_pred             CHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccC
Confidence            57899999999999999999999999999999999999999999999999999999999999986554567899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRE  108 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~  108 (124)
                      |+|+.+++|++++++|++.|+|++++..
T Consensus       480 G~G~~~~~G~~gl~~ft~~K~v~~~~~~  507 (521)
T 4e4g_A          480 SFGDLNQHGTDSIKFWTRTKTITSRWPS  507 (521)
T ss_dssp             EESSCCBSHHHHHHHTEEEEEEEECCCC
T ss_pred             CCCCCccchHHHHHHhheEEEEEEecCc
Confidence            9995345799999999999999988753

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.96  E-value=1e-28  Score=197.75  Aligned_cols=107  Identities=29%  Similarity=0.329  Sum_probs=96.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+| ||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       362 ~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~S  440 (486)
T 3pqa_A          362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKS  440 (486)
T ss_dssp             SGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGG
T ss_pred             ChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcC
Confidence            67999999999999999999 99999999999999999999999999999999999999999986543458899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccCcc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRESD  110 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~~~  110 (124)
                      |+|++  +|++++++|++.|+|+++.....
T Consensus       441 G~Gr~--~g~~gl~~f~~~k~v~~~~~~~~  468 (486)
T 3pqa_A          441 GLGRE--GVKYAMEEMSNIKTIIISKAENL  468 (486)
T ss_dssp             EESCB--SHHHHHHHTEEEEEEEEEC----
T ss_pred             cCCCC--CcHHHHHHhhceEEEEEcCCccC
Confidence            99975  79999999999999998875433

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.96  E-value=9.2e-29  Score=197.90  Aligned_cols=105  Identities=23%  Similarity=0.396  Sum_probs=98.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       356 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~S  434 (484)
T 3ros_A          356 NPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT-SGELPFGGIKKS  434 (484)
T ss_dssp             STTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCC-CTTSCBCCSGGG
T ss_pred             CcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCC-CCCCCcCCcCcc
Confidence            6899999999999999999999999999999999999999999999999999999999999996543 578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRE  108 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~  108 (124)
                      |+|++  +|++|+++|++.|+|+++...
T Consensus       435 G~Gr~--~G~~gl~~ft~~K~v~~~~~~  460 (484)
T 3ros_A          435 GYGRE--LSGLGLMAFVNEHLVIDVTKN  460 (484)
T ss_dssp             EESCB--SHHHHHTTTCEEEEEEECGGG
T ss_pred             cCCcC--chHHHHHHhheeEEEEECCCC
Confidence            99975  799999999999999987653

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.95  E-value=7.4e-29  Score=198.92  Aligned_cols=104  Identities=28%  Similarity=0.319  Sum_probs=97.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.|
T Consensus       386 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~PfGG~k~S  464 (497)
T 3k2w_A          386 NIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ-HQGFHNGWKQS  464 (497)
T ss_dssp             SHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCEETS
T ss_pred             cHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC-CCCCcCCcCCC
Confidence            57899999999999999999999999999999999999999999999999999999999999986553 78999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       465 G~G~~--~G~~gl~~ft~~k~v~~~~~  489 (497)
T 3k2w_A          465 GFGGE--DGKFGLEQYLEKKTVYINEA  489 (497)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEECC
T ss_pred             cCCcc--chHHHHHHhcceEEEEEEcc
Confidence            99975  79999999999999998764

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.95  E-value=1.1e-28  Score=199.00  Aligned_cols=104  Identities=29%  Similarity=0.447  Sum_probs=97.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       408 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~S  486 (520)
T 3ed6_A          408 MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQS  486 (520)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGG
T ss_pred             CccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcC
Confidence            6789999999999999999999999999999999999999999999999999999999999997654 478899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       487 G~Gre--~G~~gl~~~t~~k~v~~~~~  511 (520)
T 3ed6_A          487 GIGRE--LGKEGLEEYLVSKHILTNTN  511 (520)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEESS
T ss_pred             cCCcc--chHHHHHHhhceEEEEEcCC
Confidence            99976  79999999999999998764

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-28  Score=198.58  Aligned_cols=104  Identities=34%  Similarity=0.462  Sum_probs=97.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       396 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~S  474 (528)
T 3u4j_A          396 MSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKS  474 (528)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGG
T ss_pred             CccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcC
Confidence            6789999999999999999999999999999999999999999999999999999999999997644 578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++|+++|++.|+|+++..
T Consensus       475 G~Gr~--~G~~gl~~ft~~K~v~~~~~  499 (528)
T 3u4j_A          475 GLGRE--LGRYGFDEYSQFKGVHVTLG  499 (528)
T ss_dssp             EESCB--STTHHHHHTEEEEEEEEESS
T ss_pred             CCCcC--chHHHHHHhhceEEEEEeCC
Confidence            99975  69999999999999998764

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.95  E-value=1.1e-28  Score=198.32  Aligned_cols=103  Identities=31%  Similarity=0.417  Sum_probs=96.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ..+.+||||+|.|
T Consensus       400 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~-~~~~~PfGG~k~S  478 (504)
T 3ek1_A          400 MLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI-SNEVAPFGGVKQS  478 (504)
T ss_dssp             SGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC-CCSSSCBCCSGGG
T ss_pred             ChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCcCCcCcC
Confidence            678999999999999999999999999999999999999999999999999999999999998753 3478899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       479 G~Gr~--~G~~gl~~~t~~K~v~~~~  502 (504)
T 3ek1_A          479 GLGRE--GSKYGIEEYLETKYICSAY  502 (504)
T ss_dssp             EESCB--STTTSGGGGEEEEEEEEEC
T ss_pred             cCCCC--CcHHHHHHhhceEEEEEec
Confidence            99975  7999999999999999865

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.95  E-value=7.2e-29  Score=199.09  Aligned_cols=103  Identities=19%  Similarity=0.306  Sum_probs=96.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.|
T Consensus       395 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~S  473 (498)
T 4f3x_A          395 DEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQS  473 (498)
T ss_dssp             SHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGG
T ss_pred             ChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcC
Confidence            67899999999999999999999999999999999999999999999999999999999999986554 78999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       474 G~Gr~--~G~~~l~~~t~~k~v~~~~  497 (498)
T 4f3x_A          474 GYGKD--MSVYALEDYTAVRHIMINH  497 (498)
T ss_dssp             EECCB--SHHHHHHHTEEEEEEEEEC
T ss_pred             CcCcc--chHHHHHHhhceEEEEEeC
Confidence            99975  7999999999999998764

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.95  E-value=2.6e-28  Score=194.95  Aligned_cols=102  Identities=25%  Similarity=0.337  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... .+.+||||+|.|
T Consensus       379 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  457 (481)
T 3jz4_A          379 AKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKAS  457 (481)
T ss_dssp             SGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCSGGG
T ss_pred             cccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCcCCcccC
Confidence            6789999999999999999999999999999999999999999999999999999999999997643 478999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++|+++|++.|+|++.
T Consensus       458 G~G~~--~g~~g~~~~t~~k~v~~~  480 (481)
T 3jz4_A          458 GLGRE--GSKYGIEDYLEIKYMCIG  480 (481)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEE
T ss_pred             cCCCC--chHHHHHHhhceeEEEEe
Confidence            99975  799999999999999864

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.95  E-value=2.7e-28  Score=193.88  Aligned_cols=102  Identities=26%  Similarity=0.397  Sum_probs=95.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINK-NPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~-~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++.++++++++|+|+||+... ...+.+||||+|
T Consensus       352 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k  431 (457)
T 3lns_A          352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIG  431 (457)
T ss_dssp             SGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCG
T ss_pred             ChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcC
Confidence            678999999999999999999999999999 999999999999999999999999999999999753 335788999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      .||+|++  +|++|+++|++.|+|++
T Consensus       432 ~SG~G~~--~g~~~~~~f~~~k~v~~  455 (457)
T 3lns_A          432 ASGMGEY--HGHFSYLTFTHKKSVRI  455 (457)
T ss_dssp             GGEECCB--SHHHHHHHTEEEEEEEE
T ss_pred             cCCCCCC--chHHHHHHhhCeeEEEe
Confidence            9999975  79999999999999875

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.95  E-value=1.8e-28  Score=197.09  Aligned_cols=104  Identities=28%  Similarity=0.482  Sum_probs=96.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       382 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~S  460 (506)
T 3rh9_A          382 MCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKAS  460 (506)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             ChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcC
Confidence            6789999999999999999999999999999999999999999999999999999999999998654 367999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++|+++|++.|+|+++..
T Consensus       461 G~G~~--~G~~gl~~ft~~K~v~~~~~  485 (506)
T 3rh9_A          461 GIGRE--GGLEGLFEFVEAQTVPRGFA  485 (506)
T ss_dssp             EESCB--SHHHHHTTTEEEEEEEEC--
T ss_pred             cCCcC--ccHHHHHHhcceEEEEEcCc
Confidence            99975  79999999999999988653

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.95  E-value=1.4e-28  Score=196.79  Aligned_cols=102  Identities=23%  Similarity=0.368  Sum_probs=95.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ..+.+||||+|.|
T Consensus       382 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~S  460 (484)
T 3ifg_A          382 MDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI-SNEVAPFGGVKQS  460 (484)
T ss_dssp             SGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCEETT
T ss_pred             ChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcC
Confidence            689999999999999999999999999999999999999999999999999999999999998643 3578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|++.
T Consensus       461 G~Gr~--~g~~gl~~~~~~k~v~~~  483 (484)
T 3ifg_A          461 GLGRE--GSHYGIDDYVVIKYLCVA  483 (484)
T ss_dssp             EECCB--STTTTTGGGEEEEEEEEE
T ss_pred             cCCCC--chHHHHHHhhceEEEEEe
Confidence            99976  799999999999999863

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.95  E-value=3.8e-28  Score=195.04  Aligned_cols=104  Identities=32%  Similarity=0.529  Sum_probs=97.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       387 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~S  465 (503)
T 3iwj_A          387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC-FTQAPWGGVKRS  465 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC-CTTSCBCCSGGG
T ss_pred             chhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcc
Confidence            5789999999999999999999999999999999999999999999999999999999999987543 478899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       466 G~G~~--~G~~g~~~f~~~k~v~~~~~  490 (503)
T 3iwj_A          466 GFGRE--LGEWGLDNYLSVKQVTQYIS  490 (503)
T ss_dssp             EECCB--SHHHHHHTTEEEEEEEEECC
T ss_pred             cCCCc--chHHHHHHhhCeEEEEEeCC
Confidence            99976  79999999999999998764

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.95  E-value=2.5e-28  Score=196.75  Aligned_cols=103  Identities=28%  Similarity=0.372  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDT--LDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~--~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|  +||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|
T Consensus       413 ~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k  491 (517)
T 2o2p_A          413 MYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT-DVAAPFGGFK  491 (517)
T ss_dssp             SGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCCG
T ss_pred             ChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC-CCCCCcCCcC
Confidence            68999999999999999999  99999999999999999999999999999999999999999987543 4689999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|++++++|++.|+|++++
T Consensus       492 ~SG~Gr~--~G~~~l~~~~~~k~v~~~~  517 (517)
T 2o2p_A          492 QSGFGKD--LGEAALNEYLRIKTVTFEY  517 (517)
T ss_dssp             GGEECCB--SHHHHHHTTEEEEEEEEEC
T ss_pred             cCCcCcc--ChHHHHHHhCCceEEEeeC
Confidence            9999975  7999999999999998753

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.95  E-value=2e-28  Score=195.75  Aligned_cols=104  Identities=25%  Similarity=0.310  Sum_probs=79.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       375 ~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~S  454 (485)
T 4dng_A          375 SKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKAS  454 (485)
T ss_dssp             SHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------
T ss_pred             ChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCC
Confidence            56889999999999999999999999999999999999999999999999999999999999986444578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       455 G~G~~--~g~~~l~~~t~~k~v~~~~  478 (485)
T 4dng_A          455 GVGRF--GNPWVVEEFTVTKWISIQK  478 (485)
T ss_dssp             --------CHHHHHHHEEEEEEEEEC
T ss_pred             CCCcc--chHHHHHHhhceEEEEEec
Confidence            99976  6999999999999999876

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.95  E-value=5e-28  Score=193.07  Aligned_cols=106  Identities=23%  Similarity=0.323  Sum_probs=96.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ...+..||||+|.
T Consensus       358 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~  437 (474)
T 4h7n_A          358 MKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNF  437 (474)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGG
T ss_pred             cccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCC
Confidence            689999999999999999999999999999999999999999999999999999999999998653 2346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||+|.. ..|.+|+++|++.|+|+++..
T Consensus       438 SG~G~~-~~G~~g~~~f~~~k~v~~~~~  464 (474)
T 4h7n_A          438 SGLGGS-RVGAAGLKRFLRKQAFLIKTN  464 (474)
T ss_dssp             GEESCC-SSTTHHHHTTEEEEEEEEECS
T ss_pred             CCCCCC-cchHHHHHHhCeEEEEEECCC
Confidence            999832 369999999999999998764

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.95  E-value=3.6e-28  Score=194.93  Aligned_cols=102  Identities=22%  Similarity=0.346  Sum_probs=95.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       393 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~S  471 (495)
T 1wnd_A          393 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLS  471 (495)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             ChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCCcC
Confidence            6789999999999999999999999999999999999999999999999999999999999986543 478999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++|+++|++.|+|+++
T Consensus       472 G~Gr~--~G~~gl~~f~~~k~v~~~  494 (495)
T 1wnd_A          472 GYGKD--MSLYGLEDYTVVRHVMVK  494 (495)
T ss_dssp             EECCB--SHHHHHHTTEEEEEEEEE
T ss_pred             cCCcc--chHHHHHHhhCeEEEEec
Confidence            99975  799999999999999875

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.95  E-value=5.1e-28  Score=194.48  Aligned_cols=105  Identities=28%  Similarity=0.371  Sum_probs=81.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       382 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~S  461 (508)
T 3r64_A          382 MEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNS  461 (508)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-----------------
T ss_pred             ChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCC
Confidence            67899999999999999999999999999999999999999999999999999999999999976444577899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       462 G~Gr~--~G~~~l~~ft~~k~v~~~~~  486 (508)
T 3r64_A          462 GLGRF--NGDWAIEEFTTDRWIGIKRS  486 (508)
T ss_dssp             ---CC--CHHHHHHHTEEEEEEEEECC
T ss_pred             CCCcC--ccHHHHHHhhceEEEEEecc
Confidence            99976  79999999999999998765

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.95  E-value=5.2e-28  Score=194.74  Aligned_cols=104  Identities=33%  Similarity=0.447  Sum_probs=97.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ..+.+||||+|.|
T Consensus       403 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~S  481 (515)
T 2d4e_A          403 MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-RHLPTPFGGVKGS  481 (515)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC-CCTTSCBCCSGGG
T ss_pred             ChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCC
Confidence            678999999999999999999999999999999999999999999999999999999999998754 3478999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       482 G~Gr~--~G~~gl~~~~~~K~v~~~~~  506 (515)
T 2d4e_A          482 GDRRE--GGTYALDFYTDLKTIALPLR  506 (515)
T ss_dssp             BCSCB--SHHHHHHHHEEEEEEEEESS
T ss_pred             CCCcc--chHHHHHHhCceeEEEEcCC
Confidence            99975  79999999999999998753

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.95  E-value=5.1e-28  Score=193.22  Aligned_cols=102  Identities=34%  Similarity=0.399  Sum_probs=95.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       377 ~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~S  455 (479)
T 2imp_A          377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKS  455 (479)
T ss_dssp             SGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETT
T ss_pred             CHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCC
Confidence            6789999999999999999999999999999999999999999999999999999999999997654 478999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|+++
T Consensus       456 G~G~~--~g~~~l~~~~~~k~v~~~  478 (479)
T 2imp_A          456 GIGGA--DGKHGLHEYLQTQVVYLQ  478 (479)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEE
T ss_pred             CCCCC--chHHHHHHhcCeeEEEec
Confidence            99975  799999999999999864

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=99.95  E-value=3.8e-28  Score=194.30  Aligned_cols=106  Identities=43%  Similarity=0.793  Sum_probs=96.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       375 ~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~S  454 (486)
T 1t90_A          375 MTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSS  454 (486)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETT
T ss_pred             CHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcC
Confidence            57899999999999999999999999999999999999999999999999999999999999865444467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|..+++|++|+++|++.|+|++++
T Consensus       455 G~G~~~~~g~~g~~~~~~~k~v~~~~  480 (486)
T 1t90_A          455 FFGTLHANGKDSVDFYTRKKVVTARY  480 (486)
T ss_dssp             EESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCCCccchHHHHHHhhceEEEEEec
Confidence            99932247999999999999999875

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.8e-28  Score=197.61  Aligned_cols=104  Identities=30%  Similarity=0.402  Sum_probs=97.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       386 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~S  464 (517)
T 3r31_A          386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC-PVEIPFGGSKQS  464 (517)
T ss_dssp             SHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC-CTTSCBCCEETT
T ss_pred             CccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcC
Confidence            6789999999999999999999999999999999999999999999999999999999999997644 578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++|+++|++.|+|+++..
T Consensus       465 G~Gr~--~G~~gl~~ft~~K~v~~~~~  489 (517)
T 3r31_A          465 GFGRE--NSAAALEHYSELKTVYVSTG  489 (517)
T ss_dssp             EECCB--STGGGGGGSEEEEEEEECCC
T ss_pred             CCCcC--chHHHHHHhhceEEEEEcCC
Confidence            99975  79999999999999998664

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.5e-28  Score=195.82  Aligned_cols=103  Identities=34%  Similarity=0.461  Sum_probs=96.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..  ..+.+||||+|.|
T Consensus       381 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~PfGG~k~S  458 (495)
T 3b4w_A          381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA--FDPGSPFGGYKNS  458 (495)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC--CCTTSCBCCSGGG
T ss_pred             ChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC--CCCCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999999999999999999999999976  3578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       459 G~Gr~--~G~~gl~~~~~~k~v~~~~~  483 (495)
T 3b4w_A          459 GIGRE--NGPEGVEHFTQQKSVLLPMG  483 (495)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEECCTT
T ss_pred             CcCcc--chHHHHHHhcceeEEEEccC
Confidence            99975  79999999999999998754

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.95  E-value=2.9e-28  Score=197.11  Aligned_cols=105  Identities=26%  Similarity=0.353  Sum_probs=96.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcC-CCCCCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV-PIPVPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~-~~~~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+ ......+.+||||+|.
T Consensus       411 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~  490 (538)
T 3qan_A          411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKM  490 (538)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEET
T ss_pred             ChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCc
Confidence            578999999999999999999999999999999999999999999999999999999999994 4444357899999999


Q ss_pred             CCCC-CCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLG-ENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G-~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||+| ++  +|++++++|++.|+|++++.
T Consensus       491 SG~G~~~--~G~~gl~~ft~~k~v~~~~~  517 (538)
T 3qan_A          491 SGTDSKA--GGPDYLALHMQAKTVSEMYA  517 (538)
T ss_dssp             TBSCCCB--TSTTTGGGGEEEEEEEEEC-
T ss_pred             CCCCccc--ccHHHHHHhhCeEEEEEecC
Confidence            9999 75  79999999999999998764

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.95  E-value=5e-28  Score=192.39  Aligned_cols=102  Identities=25%  Similarity=0.428  Sum_probs=95.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       359 ~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~S  437 (462)
T 3etf_A          359 MTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSAS-DARVAFGGVKKS  437 (462)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCSGGG
T ss_pred             ChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcCCC
Confidence            5678999999999999999999999999999999999999999999999999999999999997543 478899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++|+++|++.|+|+++
T Consensus       438 G~G~~--~g~~g~~~~~~~k~v~~~  460 (462)
T 3etf_A          438 GFGRE--LSHFGLHEFCNVQTVWKN  460 (462)
T ss_dssp             EECCB--SHHHHHHTTEEEEEEEEC
T ss_pred             CCCcc--chHHHHHHHhceeEEEEe
Confidence            99976  799999999999999864

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.95  E-value=6.7e-28  Score=193.59  Aligned_cols=103  Identities=38%  Similarity=0.462  Sum_probs=96.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       394 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~S  472 (501)
T 1bxs_A          394 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMS  472 (501)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             CHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcC
Confidence            5789999999999999999999999999999999999999999999999999999999999997543 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       473 G~G~~--~G~~~l~~f~~~K~v~~~~  496 (501)
T 1bxs_A          473 GNGRE--LGEYGFHEYTEVKTVTIKI  496 (501)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEEC
T ss_pred             CcCcc--chHHHHHHhhCeeEEEEcc
Confidence            99975  7999999999999999875

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=99.95  E-value=1e-27  Score=194.79  Aligned_cols=117  Identities=22%  Similarity=0.319  Sum_probs=104.0

Q ss_pred             CCccccCcccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHHhcc--eeeEEEcCCCC-CCCCCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDT--LDEAISII-NKNPYGNGTAIFTNNGATARKFSQEID--CGQVGINVPIP-VPLSMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~--~~eai~~~-n~~~~gl~~~vft~d~~~~~~~~~~l~--ag~v~VN~~~~-~~~~~~pf   74 (124)
                      |++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+++++++  +|+|+||+.+. ...+.+||
T Consensus       441 ~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PF  520 (563)
T 4e3x_A          441 EPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPF  520 (563)
T ss_dssp             CGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCC
T ss_pred             ChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCC
Confidence            68999999999999999996  79999999 799999999999999999999999976  99999999753 33467899


Q ss_pred             CCccCCCCCCCCcCcHHHHHhcceeeEEEEeccCccccccccccCCCCCC
Q psy10611         75 TGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMPVMQ  124 (124)
Q Consensus        75 gG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~  124 (124)
                      ||+|.||+|+ +.+|++++++|++.|+|.+++.      ++.++.||+|+
T Consensus       521 GG~k~SG~g~-~~~G~~~l~~~~~~k~v~~~~~------~~~~~~yp~~~  563 (563)
T 4e3x_A          521 GGARASGTND-KPGGPHYILRWTSPQVIKETHK------PLGDWRYSYMQ  563 (563)
T ss_dssp             CCEETTBCCC-CTTSTTGGGGGBCCEEEEEECS------CCCCSSCTTCC
T ss_pred             CCccccCCCC-ccCCHHHHHHhCceEEEEEeCc------CCCcccCCCCC
Confidence            9999999984 2479999999999999998763      56788999985

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=99.95  E-value=9.1e-28  Score=191.60  Aligned_cols=103  Identities=34%  Similarity=0.383  Sum_probs=96.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcC-CCCCCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV-PIPVPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~-~~~~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+ +... .+.+||||+|.
T Consensus       371 ~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~  449 (475)
T 1euh_A          371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKK  449 (475)
T ss_dssp             SGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEET
T ss_pred             CHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCC
Confidence            678999999999999999999999999999999999999999999999999999999999998 6543 47899999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|++  +|++++++|++.|+|++++
T Consensus       450 SG~G~~--~g~~~~~~~~~~k~v~~~~  474 (475)
T 1euh_A          450 SGAGIQ--GVKYSIEAMTTVKSVVFDI  474 (475)
T ss_dssp             TEESCB--SHHHHHHHTEEEEEEEEEC
T ss_pred             CCcCCC--ccHHHHHHhCCeeEEEEec
Confidence            999975  7999999999999998754

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.95  E-value=3.7e-28  Score=195.10  Aligned_cols=103  Identities=30%  Similarity=0.475  Sum_probs=96.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       394 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~S  472 (503)
T 1a4s_A          394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-PVEVPFGGYKMS  472 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             CHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC-CCCCCCCCcCCC
Confidence            5789999999999999999999999999999999999999999999999999999999999997543 467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       473 G~G~~--~G~~~l~~f~~~k~v~~~~  496 (503)
T 1a4s_A          473 GFGRE--NGQATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             EECCB--STTGGGGGSEEEEEEEECC
T ss_pred             CCCcc--chHHHHHHhcCceEEEEcc
Confidence            99975  7999999999999999865

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.95  E-value=4.2e-28  Score=194.74  Aligned_cols=105  Identities=27%  Similarity=0.371  Sum_probs=97.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       389 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~S  468 (501)
T 1uxt_A          389 MVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS  468 (501)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETT
T ss_pred             CHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCC
Confidence            67899999999999999999999999999999999999999999999999999999999999873223578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       469 G~G~~--~G~~~l~~f~~~k~v~~~~~  493 (501)
T 1uxt_A          469 GVFRE--GIGYAVEAVTAYKTIVFNYK  493 (501)
T ss_dssp             EESCB--STTTTHHHHEEEEEEEEECT
T ss_pred             CCCcc--ChHHHHHHhCceeEEEEecC
Confidence            99975  79999999999999998763

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.95  E-value=9.6e-28  Score=192.52  Aligned_cols=99  Identities=29%  Similarity=0.423  Sum_probs=92.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||. . ...+.+||||+|.|
T Consensus       397 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~-~~~~~~PfGG~k~S  474 (497)
T 3i44_A          397 MRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-H-ELPGGSYFGGVKFS  474 (497)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-C-CCCTTCCBCCSGGG
T ss_pred             CHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-C-CCCCCCCcCCcCcC
Confidence            678999999999999999999999999999999999999999999999999999999999995 2 33467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      |+|++  +|++++++|++.|+|+
T Consensus       475 G~Gr~--~G~~gl~~~t~~K~v~  495 (497)
T 3i44_A          475 GRARE--GGLWGIKEFLDTKAIS  495 (497)
T ss_dssp             CCCCB--SHHHHHHTTEEEEEES
T ss_pred             cCCcc--chHHHHHHhcceeEEE
Confidence            99975  7999999999999875

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.95  E-value=6.8e-28  Score=193.51  Aligned_cols=103  Identities=36%  Similarity=0.455  Sum_probs=96.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       393 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~S  471 (500)
T 1o04_A          393 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMS  471 (500)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGG
T ss_pred             ChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCC
Confidence            6789999999999999999999999999999999999999999999999999999999999987543 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++++++|++.|+|++++
T Consensus       472 G~G~~--~G~~gl~~f~~~K~v~~~~  495 (500)
T 1o04_A          472 GSGRE--LGEYGLQAYTEVKTVTVKV  495 (500)
T ss_dssp             EESCB--STGGGGGGGEEEEEEEEEC
T ss_pred             CCCcc--chHHHHHHhcceEEEEEec
Confidence            99975  7999999999999999875

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.95  E-value=6e-28  Score=193.75  Aligned_cols=104  Identities=22%  Similarity=0.327  Sum_probs=96.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH--HhcceeeEEEcCCCCCCCCCCccCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFS--QEIDCGQVGINVPIPVPLSMFSFTGSR   78 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~--~~l~ag~v~VN~~~~~~~~~~pfgG~~   78 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++  +++++|+|+||+......+.+||||+|
T Consensus       394 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k  473 (500)
T 2j6l_A          394 ASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEK  473 (500)
T ss_dssp             CHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSG
T ss_pred             ChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcC
Confidence            678999999999999999999999999999999999999999999999999  779999999998754444678999999


Q ss_pred             CCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         79 GSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        79 ~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      .||+|++  +|.+++++|++.|+|++++
T Consensus       474 ~SG~G~~--~g~~~~~~f~~~k~v~~~~  499 (500)
T 2j6l_A          474 HTGGGRE--SGSDAWKQYMRRSTCTINY  499 (500)
T ss_dssp             GGCSCCE--ESTTGGGGGEEEEEEEEEC
T ss_pred             CCCCCCc--chHHHHHHhhceEEEEEeC
Confidence            9999975  6999999999999998763

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.95  E-value=4e-27  Score=189.58  Aligned_cols=104  Identities=24%  Similarity=0.346  Sum_probs=95.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... ..+.+||||+|.
T Consensus       411 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~  490 (516)
T 1uzb_A          411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKL  490 (516)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGG
T ss_pred             CHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCc
Confidence            6799999999999999999999999999999999999999999999999999999999999986432 346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      ||+|+. .+|+.++++|++.|+|+++
T Consensus       491 SG~G~~-~~g~~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          491 SGTNAK-TGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             GBSCCC-BTSHHHHHTTEEEEEEEEE
T ss_pred             CCCCCc-cchHHHHHHcCCeeEEEec
Confidence            999952 3799999999999999875

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.95  E-value=1.3e-27  Score=191.38  Aligned_cols=102  Identities=30%  Similarity=0.418  Sum_probs=95.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       384 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~S  462 (487)
T 2w8n_A          384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQS  462 (487)
T ss_dssp             GGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGG
T ss_pred             chhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCC
Confidence            6789999999999999999999999999999999999999999999999999999999999997644 357899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      |+|++  +|++++++|++.|+|+++
T Consensus       463 G~G~~--~G~~~l~~f~~~k~v~~~  485 (487)
T 2w8n_A          463 GLGRE--GSKYGIDEYLELKYVCYG  485 (487)
T ss_dssp             EESCB--STTTGGGGGEEEEEEEEC
T ss_pred             CcCCC--chHHHHHHhcCccEEEEe
Confidence            99965  799999999999999875

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.94  E-value=1.1e-27  Score=191.13  Aligned_cols=100  Identities=34%  Similarity=0.526  Sum_probs=74.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+ .. ..+.+||||+|.|
T Consensus       376 ~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~-~~~~~PfGG~k~S  453 (478)
T 3ty7_A          376 MTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG-RKPDLPFGGYKQS  453 (478)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC--------------
T ss_pred             CcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC-CCCCCCcCCcCcC
Confidence            568899999999999999999999999999999999999999999999999999999999999 33 3467899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEE
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                      |+|++  +|++++++|++.|+|+.
T Consensus       454 G~G~~--~G~~~l~~~t~~k~v~~  475 (478)
T 3ty7_A          454 GLGRE--WGDYGIEEFLEVKSIAG  475 (478)
T ss_dssp             -----------CCGGGEEEEEEET
T ss_pred             cCCcc--chHHHHHHhcCeEEEEE
Confidence            99976  79999999999999873

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.94  E-value=2.2e-27  Score=189.04  Aligned_cols=105  Identities=23%  Similarity=0.144  Sum_probs=96.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+.++||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       329 ~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~S  407 (463)
T 2h5g_A          329 VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRFGLGAEV  407 (463)
T ss_dssp             -CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTSSCCS
T ss_pred             chHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCCCCCccC
Confidence            6899999999999999999999999999999999999999999999999999999999999997644 468999999999


Q ss_pred             CCC--CCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLG--ENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G--~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|  +++.+|++++++|++.|+|+++.
T Consensus       408 G~G~~r~~~~G~~gl~~ft~~K~v~~~~  435 (463)
T 2h5g_A          408 GISTSRIHARGPVGLEGLLTTKWLLRGK  435 (463)
T ss_dssp             CEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred             cCCCCcccCCCHHHHHHhceeEEEEECC
Confidence            999  43337999999999999999865

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.94  E-value=5.6e-27  Score=184.99  Aligned_cols=105  Identities=26%  Similarity=0.221  Sum_probs=95.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+..||||.+.|
T Consensus       316 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGg~~~S  394 (427)
T 1o20_A          316 EDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEI  394 (427)
T ss_dssp             GGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCS
T ss_pred             cchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc-CCCCCCCCcccc
Confidence            5789999999999999999999999999999999999999999999999999999999999987543 467899999999


Q ss_pred             CCC--CCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLG--ENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G--~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|  +.+.+|++++++|++.|+|+++.
T Consensus       395 G~g~~~~~~~g~~gl~~~~~~k~v~~~~  422 (427)
T 1o20_A          395 GISTQRFHARGPVGLRELTTYKFVVLGE  422 (427)
T ss_dssp             CEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred             cccCCcccCCChHHHHHHhceEEEEECC
Confidence            987  32346999999999999998764

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.93  E-value=7.5e-27  Score=185.02  Aligned_cols=105  Identities=27%  Similarity=0.263  Sum_probs=93.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++... .+..||||.+.|
T Consensus       333 ~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~s  411 (444)
T 4ghk_A          333 DEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEI  411 (444)
T ss_dssp             SGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCS
T ss_pred             chhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccc
Confidence            6789999999999999999999999999999999999999999999999999999999999998654 367899999999


Q ss_pred             CCCC--CCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGE--NHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~--~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|.  .+++|++|+++|++.|+|++..
T Consensus       412 G~g~~~~~~~G~~gl~~~t~~K~v~~~~  439 (444)
T 4ghk_A          412 GISNDKLHARGPVGLEGLTSLKYVVLGH  439 (444)
T ss_dssp             EEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred             cccCCcccCCChhHHHhhceEEEEEECC
Confidence            8872  2347999999999999998764

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=99.93  E-value=5.6e-26  Score=183.52  Aligned_cols=104  Identities=19%  Similarity=0.269  Sum_probs=93.2

Q ss_pred             CCccccCcccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--ceeeEEEcCCCC----
Q psy10611          1 MKCYKEEIFGPVLVCLTVD---TL-----DEAISIINKNPYGNGTAIFTNNGATARKFSQEI--DCGQVGINVPIP----   66 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~---~~-----~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l--~ag~v~VN~~~~----   66 (124)
                      |++++||+||||++|++|+   |+     ||||+++|+++|||+++|||+|.+++.++++++  ++|+|+||+...    
T Consensus       397 ~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~  476 (534)
T 2y53_A          397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQ  476 (534)
T ss_dssp             SSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTC
T ss_pred             CHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccc
Confidence            5799999999999999999   99     999999999999999999999999999999999  899999998632    


Q ss_pred             ----CCCCCCccCCccCCCCCCCCcCcHHHHHhcceeeEEEEe
Q psy10611         67 ----VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        67 ----~~~~~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                          ...+.+||||+|.||+|++ .+|++++++|++.|++...
T Consensus       477 ~~~~~~~~~~pfGG~k~SG~Gr~-~~g~~~l~~~~~~k~v~~~  518 (534)
T 2y53_A          477 TGHGNVMPMSLHGGPGRAGGGEE-LGGLRALAFYHRRSAIQAA  518 (534)
T ss_dssp             CCSSCCCTTSEECCSGGGCSCCE-ESGGGGGGGGEEEEEEEEE
T ss_pred             cccCCCCCCCCCCCcccCCCCCC-cchHHHHHHHhhhheeecC
Confidence                1246789999999999975 2599999999999988763

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.93  E-value=8.5e-26  Score=182.25  Aligned_cols=101  Identities=17%  Similarity=0.131  Sum_probs=92.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHHhcc--eeeEEEcCCCCC--CCCCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTN--NGATARKFSQEID--CGQVGINVPIPV--PLSMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~--d~~~~~~~~~~l~--ag~v~VN~~~~~--~~~~~pf   74 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+  |.+++.+++++++  +|+|+||+.+..  ..+.+||
T Consensus       406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf  485 (528)
T 3v4c_A          406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH  485 (528)
T ss_dssp             CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred             ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence            689999999999999999999999999999999999999999  8999999999997  999999996432  3467899


Q ss_pred             CC-ccCCCCCCCCcCcHHHHHhcceeeE
Q psy10611         75 TG-SRGSFLGENHFYGKQGFYFYTETKT  101 (124)
Q Consensus        75 gG-~~~SG~G~~~~~G~~~l~~~~~~k~  101 (124)
                      || +|.||+|+++.+|++|+++|++.|+
T Consensus       486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~  513 (528)
T 3v4c_A          486 GGPYPASTNFGATSVGTMSIRRFLRPVA  513 (528)
T ss_dssp             CCTTTTBSCTTCCSSSGGGGGGGEEEEE
T ss_pred             CCCCCCCCCCCCCCCcHHHHHHhchhHH
Confidence            99 9999999875569999999999986

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.93  E-value=3e-26  Score=182.75  Aligned_cols=102  Identities=23%  Similarity=0.204  Sum_probs=71.7

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccC-----
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFT-----   75 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfg-----   75 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+..|||     
T Consensus       334 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~pfG~Gg~~  412 (468)
T 1vlu_A          334 EQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF-ADGFRYGFGAEV  412 (468)
T ss_dssp             ---------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG-CC----------
T ss_pred             chhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCCCCCCCc
Confidence            6789999999999999999999999999999999999999999999999999999999999997644 4678999     


Q ss_pred             CccCCCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         76 GSRGSFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        76 G~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|.||+|++   |++++++|++.|+|+++.
T Consensus       413 G~~~SG~g~~---G~~gl~~f~~~K~v~~~~  440 (468)
T 1vlu_A          413 GISTSKIHAR---GPVGLDGLVSYQYQIRGD  440 (468)
T ss_dssp             ---------------CCSGGGEEEEEEEECS
T ss_pred             ceecCCCCCC---cchHHHHhcceEEEEECC
Confidence            9999999963   999999999999998864

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.92  E-value=1.7e-25  Score=191.18  Aligned_cols=106  Identities=25%  Similarity=0.333  Sum_probs=97.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC-CCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV-PLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~-~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+.. ..+.+||||+|.
T Consensus       905 ~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~  984 (1026)
T 4f9i_A          905 HRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARM  984 (1026)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGG
T ss_pred             ccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCc
Confidence            6789999999999999999999999999999999999999999999999999999999999997543 346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      ||+|+. .+|++++++|++.|+|+++..
T Consensus       985 SG~G~~-~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A          985 SGVGTK-AGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp             GBSSCC-BTSTTTGGGGEEEEEEEEECC
T ss_pred             CCCCCC-cCCHHHHHHhceEEEEEEecc
Confidence            999963 479999999999999998764

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.92  E-value=2.4e-25  Score=178.21  Aligned_cols=99  Identities=21%  Similarity=0.218  Sum_probs=90.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+......+.+||||+|.|
T Consensus       374 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~S  453 (490)
T 3ju8_A          374 AERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGAS  453 (490)
T ss_dssp             SSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGG
T ss_pred             CccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCcccc
Confidence            67999999999999999999999999999999999999999999999999999999999999976554578999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |.+        ++++|++.|+|++...
T Consensus       454 G~~--------~~~~~~~~k~v~~~~~  472 (490)
T 3ju8_A          454 GNH--------RPSAYYAADYCAYPVA  472 (490)
T ss_dssp             BSS--------CCEETTHHHHHEEEEE
T ss_pred             chh--------HHHhhheeEEEEEecc
Confidence            765        4799999999987654

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.91  E-value=1.2e-24  Score=174.92  Aligned_cols=103  Identities=13%  Similarity=0.123  Sum_probs=91.3

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCH--HHHHHHHHhc--ceeeEEEcCCCCC--CCCCCcc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNG--ATARKFSQEI--DCGQVGINVPIPV--PLSMFSF   74 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~--~~~~~~~~~l--~ag~v~VN~~~~~--~~~~~pf   74 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.  +++.++++++  ++|+|+||+....  ..+.+||
T Consensus       371 ~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pf  450 (510)
T 1ez0_A          371 HPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVH  450 (510)
T ss_dssp             CGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCC
T ss_pred             CHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCC
Confidence            67999999999999999999999999999999999999999987  7999999999  7999999987532  2367899


Q ss_pred             CC-ccCCCCCCCCcCcHHHHHhcceeeEEE
Q psy10611         75 TG-SRGSFLGENHFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        75 gG-~~~SG~G~~~~~G~~~l~~~~~~k~v~  103 (124)
                      || +|.||.|+...+|++++++|++.|++.
T Consensus       451 GG~~~~sG~g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          451 GGPYPASTHSASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             CCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred             CCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence            99 799999864446999999999887654

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.91  E-value=1e-24  Score=186.16  Aligned_cols=106  Identities=19%  Similarity=0.266  Sum_probs=96.1

Q ss_pred             CCccccCcccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCC-CCCCccCCc
Q psy10611          1 MKCYKEEIFGPVLVCLTVDT--LDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVP-LSMFSFTGS   77 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~--~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~-~~~~pfgG~   77 (124)
                      |++++||+||||++|++|++  +||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... .+.+||||+
T Consensus       880 ~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~  959 (1001)
T 3haz_A          880 AGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGN  959 (1001)
T ss_dssp             GGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCC
T ss_pred             HHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCc
Confidence            46889999999999999996  899999999999999999999999999999999999999999976432 356799999


Q ss_pred             cCCCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         78 RGSFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        78 ~~SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |.||+|+. .+|++++++|++.|+|+++..
T Consensus       960 k~SG~G~~-~gG~~gl~~ft~~K~v~~~~~  988 (1001)
T 3haz_A          960 GLSGTGPK-AGGPHYLARFATEQTVTINTA  988 (1001)
T ss_dssp             GGGBCCCC-BTSTTSGGGGEEEEEEEEECG
T ss_pred             ccCcCCCC-CCCHHHHHHhceeeEEEECCc
Confidence            99999952 379999999999999998764

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.86  E-value=7e-22  Score=157.22  Aligned_cols=101  Identities=16%  Similarity=0.189  Sum_probs=89.6

Q ss_pred             cccCcccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCC--------CCCC
Q psy10611          4 YKEEIFGPVLVCLTVDTLDEAI----SIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPV--------PLSM   71 (124)
Q Consensus         4 ~~eE~FgPv~~v~~~~~~~eai----~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~--------~~~~   71 (124)
                      +.||+||||++|++|+|+||||    +++|.++|||+++|||+|.+++.++++++++|+|+||++..+        ..+.
T Consensus       338 ~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~  417 (464)
T 3k9d_A          338 YSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPA  417 (464)
T ss_dssp             GGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCC
T ss_pred             ccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCcc
Confidence            3489999999999999999997    799999999999999999999999999999999999997532        3478


Q ss_pred             CccCCccCCCCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         72 FSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        72 ~pfgG~~~SG~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      +|||| +.+|.|..  +|..+++.|++.|+|.....
T Consensus       418 ~~~G~-G~~G~g~~--~~~~~~~~~~~~k~v~~~~~  450 (464)
T 3k9d_A          418 LTLGC-GAVGGSSS--SDNIGPENLFNIRRIATGVL  450 (464)
T ss_dssp             SCBBC-TGGGTCSC--CSBCCGGGSEEEEEEEECCC
T ss_pred             ccccC-cCCCCCcC--CCCCCHHHheEEEEEEecCC
Confidence            99998 55777754  68999999999999987654

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.64  E-value=1.2e-16  Score=126.71  Aligned_cols=66  Identities=20%  Similarity=0.379  Sum_probs=58.4

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEecCCHHHHHH---HHHhcceeeEEEcCCCCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNP----YGNGTAIFTNNGATARK---FSQEIDCGQVGINVPIPV   67 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~----~gl~~~vft~d~~~~~~---~~~~l~ag~v~VN~~~~~   67 (124)
                      |++. +|+||||++|++|+|+||||+++|+..    |||+++|||+|.+++.+   +++++++|+|+||+++.+
T Consensus       331 ~~~~-~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~  403 (452)
T 3my7_A          331 DAFA-HEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTH  403 (452)
T ss_dssp             CGGG-SCCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-
T ss_pred             chhh-cCccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCC
Confidence            3455 489999999999999999999999974    99999999999877777   999999999999997543

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=86.00  E-value=2.8  Score=32.96  Aligned_cols=78  Identities=19%  Similarity=0.188  Sum_probs=54.6

Q ss_pred             EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-eeeEEEcCCCC--------CCCCCCccCCccCCCCCC
Q psy10611         14 VCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEID-CGQVGINVPIP--------VPLSMFSFTGSRGSFLGE   84 (124)
Q Consensus        14 ~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~-ag~v~VN~~~~--------~~~~~~pfgG~~~SG~G~   84 (124)
                      .++.++|++||++++|..--=|- -|.++|+   +.+..+++ +|.|++...+.        ...+.+|-+|....    
T Consensus       306 ~ii~v~~l~ea~~~~N~~APEHL-el~~~dp---~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~----  377 (434)
T 1kae_A          306 RLIVTKDLAQCVEISNQYGPEHL-IIQTRNA---RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTAT----  377 (434)
T ss_dssp             EEEECSSHHHHHHHHHHHCCSEE-EEESTTH---HHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGT----
T ss_pred             eEEEECCHHHHHHHHHHhhhHhh-hhhhcCH---HHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceec----
Confidence            68889999999999999754443 5789997   45777776 89999997542        23456777765432    


Q ss_pred             CCcCcHHHHHhcceeeEE
Q psy10611         85 NHFYGKQGFYFYTETKTV  102 (124)
Q Consensus        85 ~~~~G~~~l~~~~~~k~v  102 (124)
                         .+.-+.+.|....++
T Consensus       378 ---~sgLsV~~F~K~~s~  392 (434)
T 1kae_A          378 ---CSSLGLADFQKRMTV  392 (434)
T ss_dssp             ---CCCSCGGGGEEEEEE
T ss_pred             ---cCCCcHHhccceeeE
Confidence               233456677765543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-33
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-32
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-31
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-30
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	5e-30
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-29
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	4e-28
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-27
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	8e-24
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-14
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	8e-13

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  118 bits (297), Expect = 3e-33
 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M   KEEIFGPV+  L   T++E +   N + YG   A+FT +   A   SQ +  G V 
Sbjct: 387 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 446

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 110
           +N    V  +   F G + S  G     G+ G   YTE KTVT    + +
Sbjct: 447 VNC-YDVFGAQSPFGGYKMS--GSGRELGEYGLQAYTEVKTVTVKVPQKN 493

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  115 bits (288), Expect = 6e-32
 Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+  KEEIFGPV   +   +LD+ I   N   YG    IFTN+   A   S  +  G V 
Sbjct: 387 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 446

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 110
           +N    V  +   F G + S  G     G+ GF+ YTE KTVT    + +
Sbjct: 447 VNC-YSVVSAQCPFGGFKMS--GNGRELGEYGFHEYTEVKTVTIKISQKN 493

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  113 bits (283), Expect = 3e-31
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M C KEEIFGPV+  L  DT +E +   N   +G  + +FT + + A + +  ++ G   
Sbjct: 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCY 453

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 110
           IN     P+ +  F G + S  G     G+    +Y++ KTV     + D
Sbjct: 454 INTYSISPVEV-PFGGYKMSGFG--RENGQATVDYYSQLKTVIVEMGDVD 500

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  111 bits (279), Expect = 1e-30
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 2/107 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
            +  +EEIFGPVL  + V    EA+ + N  PYG    +++          +E   G + 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470

Query: 61  INVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 106
            N  I    + +  F G + S               + E K V + +
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKT-GALDYLRLFLEMKAVAERF 516

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  110 bits (274), Expect = 5e-30
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M  YK E+F PV   + V  LD+AI + N  PYG   A+F  +    R+  + ++ G + 
Sbjct: 387 MVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 446

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 107
           IN      +  + F G + S +              T  KT+   ++
Sbjct: 447 INDMPRHGIGYYPFGGRKKSGVFREG--IGYAVEAVTAYKTIVFNYK 491

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  107 bits (267), Expect = 4e-29
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
           M+   EE FGPVL  + V +++EAI I NK+ YG   +IFTN+   A   +++++ G V 
Sbjct: 370 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 429

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           IN         F F G++ S  G      K      T  K+V 
Sbjct: 430 INNKTQRGTDNFPFLGAKKSGAGIQG--VKYSIEAMTTVKSVV 470

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (260), Expect = 4e-28
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               ++E+FGPV+     D  ++ ++  N + YG  ++++T +   A + S  +  G   
Sbjct: 372 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 431

Query: 61  INVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 103
           +N    +   M    G + S  G++      G   YT  + V 
Sbjct: 432 VNTHFMLVSEM-PHGGQKLSGYGKDM--SLYGLEDYTVVRHVM 471

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (253), Expect = 3e-27
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
               +EEIFGPV+  + V +L+EAI  IN+        +F+NN    +K   E   G V 
Sbjct: 326 SPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT 385

Query: 61  IN-VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHS 114
            N V + + +    F G   S +G   ++GK+ F  ++  ++       ++  H 
Sbjct: 386 ANDVIVHITVPTLPFGGVGNSGMG--AYHGKKSFETFSHRRSCLVKSLLNEEAHK 438

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 92.0 bits (227), Expect = 8e-24
 Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 1/105 (0%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVG 60
              +  E    ++    V  +DEAI  I K   G+  +I T N + A+KF  EID   V 
Sbjct: 303 EDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVY 362

Query: 61  INVPIPVPLSM-FSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 104
           +N          F F    G      H  G  G    T  K V  
Sbjct: 363 VNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVL 407

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 66.3 bits (160), Expect = 2e-14
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 14/119 (11%)

Query: 1   MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNG--ATARKFSQ--EIDC 56
              ++EEIFGP  + +  + + + +S+           I           +     E   
Sbjct: 367 HPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIA 426

Query: 57  GQVGIN---VPIPVPLSMFS---FTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRES 109
           G++  N     + V  +M     +  S  S        G +  + +       Q   ES
Sbjct: 427 GRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS---VGAEAIHRWLRPVAY-QALPES 481

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.4 bits (148), Expect = 8e-13
 Identities = 18/61 (29%), Positives = 26/61 (42%)

Query: 4   YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINV 63
           + +E     L    V + + AI  IN +   +  AI T N A A KF + +D   V  N 
Sbjct: 326 FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNA 385

Query: 64  P 64
            
Sbjct: 386 S 386

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.97
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	99.96
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.96
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.95
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	99.95
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.95
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	99.95
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	99.95
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.92
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.85
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.81
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	81.45

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.1e-30  Score=205.01  Aligned_cols=119  Identities=27%  Similarity=0.382  Sum_probs=107.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCC-CCCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPI-PVPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~-~~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+.. ....+.+||||+|.
T Consensus       326 ~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~  405 (446)
T d1ad3a_         326 SPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGN  405 (446)
T ss_dssp             SGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGG
T ss_pred             CHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCcccccc
Confidence            67899999999999999999999999999999999999999999999999999999999999864 33457899999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEeccCccccccccccCCC
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVSMP  121 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~  121 (124)
                      ||+|++  +|++++++|++.|+|+++...++.+..-..|+||
T Consensus       406 SG~G~~--~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~  445 (446)
T d1ad3a_         406 SGMGAY--HGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP  445 (446)
T ss_dssp             GEECCC--STHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred             ceeccc--hHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence            999986  6999999999999999988766655556677776

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=6e-30  Score=201.84  Aligned_cols=103  Identities=21%  Similarity=0.341  Sum_probs=97.1

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++... .+.+||||+|.|
T Consensus       372 ~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfGG~k~S  450 (474)
T d1wnda_         372 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLS  450 (474)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             ccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCc-cCCCCccccccc
Confidence            5678999999999999999999999999999999999999999999999999999999999997654 467999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++|+++|++.|+|+++|
T Consensus       451 G~G~~--~g~~gl~~~t~~k~v~i~~  474 (474)
T d1wnda_         451 GYGKD--MSLYGLEDYTVVRHVMVKH  474 (474)
T ss_dssp             EECCB--SHHHHHHTTEEEEEEEEEC
T ss_pred             ccCcc--CHHHHHHHcCCEEEEEEeC
Confidence            99975  7999999999999999985

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.96  E-value=2.4e-29  Score=199.35  Aligned_cols=105  Identities=37%  Similarity=0.458  Sum_probs=98.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++... .+.+||||+|.|
T Consensus       387 ~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~S  465 (494)
T d1bxsa_         387 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMS  465 (494)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGG
T ss_pred             cHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCc-CCCCCcCccccc
Confidence            5678999999999999999999999999999999999999999999999999999999999987654 477899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEeccC
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWRE  108 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~~  108 (124)
                      |+|++  +|.+|+++|++.|+|+++++.
T Consensus       466 G~G~~--~g~~~~~~ft~~k~i~~~~~~  491 (494)
T d1bxsa_         466 GNGRE--LGEYGFHEYTEVKTVTIKISQ  491 (494)
T ss_dssp             EESCB--SHHHHHHTTEEEEEEEEECSC
T ss_pred             cCChh--hHHHHHHHhcceEEEEEecCC
Confidence            99975  799999999999999999863

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.95  E-value=3.4e-29  Score=198.57  Aligned_cols=105  Identities=27%  Similarity=0.362  Sum_probs=99.0

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.++++++++++++|+|+||+.+....+.+||||.|.|
T Consensus       387 ~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S  466 (499)
T d1ky8a_         387 MVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS  466 (499)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETT
T ss_pred             ChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccC
Confidence            56789999999999999999999999999999999999999999999999999999999999986665678999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |.|++  +|.+++++|++.|+|+++|.
T Consensus       467 G~G~~--~g~~~~~~~~~~k~i~~~~~  491 (499)
T d1ky8a_         467 GVFRE--GIGYAVEAVTAYKTIVFNYK  491 (499)
T ss_dssp             EESCB--STTTTHHHHEEEEEEEEECT
T ss_pred             cCCCC--CHHHHHHHhhCEEEEEEcCC
Confidence            99975  79999999999999999885

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.7e-28  Score=195.40  Aligned_cols=105  Identities=24%  Similarity=0.371  Sum_probs=96.6

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCC-CCCCCCccCCccC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIP-VPLSMFSFTGSRG   79 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~-~~~~~~pfgG~~~   79 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|+|+||+... ...+.+||||+|.
T Consensus       411 ~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~  490 (516)
T d1uzba_         411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKL  490 (516)
T ss_dssp             SGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGG
T ss_pred             chhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCccc
Confidence            678999999999999999999999999999999999999999999999999999999999999753 3346789999999


Q ss_pred             CCCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         80 SFLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        80 SG~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      ||+|+++ +|.+++++|++.|+|+.+|
T Consensus       491 SG~G~~~-G~~~~l~~~~~~k~v~~r~  516 (516)
T d1uzba_         491 SGTNAKT-GALDYLRLFLEMKAVAERF  516 (516)
T ss_dssp             GBSCCCB-TSHHHHHTTEEEEEEEEEC
T ss_pred             ccCCccc-chHHHHHHhCCeeeEEEcC
Confidence            9999863 5689999999999999875

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.95  E-value=1.4e-28  Score=193.23  Aligned_cols=104  Identities=34%  Similarity=0.383  Sum_probs=98.9

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|++++||+++|||+|.++++++++++++|+|+||+++....+.+||||.|.|
T Consensus       370 ~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~S  449 (474)
T d1euha_         370 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKS  449 (474)
T ss_dssp             SGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETT
T ss_pred             chhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccC
Confidence            67899999999999999999999999999999999999999999999999999999999999987666678999999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEec
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLW  106 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~  106 (124)
                      |+|++  +|++|+++|++.|+|++++
T Consensus       450 G~G~~--~g~~~l~~~~~~k~v~~~~  473 (474)
T d1euha_         450 GAGIQ--GVKYSIEAMTTVKSVVFDI  473 (474)
T ss_dssp             EESCB--SHHHHHHHTEEEEEEEEEC
T ss_pred             ccCcc--CHHHHHHHhCcEEEEEEec
Confidence            99975  7999999999999999875

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=6.8e-29  Score=197.31  Aligned_cols=104  Identities=31%  Similarity=0.499  Sum_probs=97.8

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+... +.+||||+|.|
T Consensus       394 ~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~S  472 (503)
T d1a4sa_         394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP-VEVPFGGYKMS  472 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC-TTSCBCCSGGG
T ss_pred             CHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC-CCCCccCcccC
Confidence            56789999999999999999999999999999999999999999999999999999999999976543 67899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|++  +|++++++|++.|+|++++.
T Consensus       473 G~G~~--~g~~~l~~~t~~k~v~~~~~  497 (503)
T d1a4sa_         473 GFGRE--NGQATVDYYSQLKTVIVEMG  497 (503)
T ss_dssp             EECCB--STTGGGGGSEEEEEEEECCS
T ss_pred             cCCcc--hHHHHHHHhhCeEEEEEcCC
Confidence            99986  69999999999999999875

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.95  E-value=8.7e-29  Score=196.17  Aligned_cols=104  Identities=36%  Similarity=0.448  Sum_probs=97.5

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGS   80 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~S   80 (124)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.|
T Consensus       387 ~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~S  465 (494)
T d1o04a_         387 MTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMS  465 (494)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGG
T ss_pred             CHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcccc
Confidence            5678999999999999999999999999999999999999999999999999999999999987654 367899999999


Q ss_pred             CCCCCCcCcHHHHHhcceeeEEEEecc
Q psy10611         81 FLGENHFYGKQGFYFYTETKTVTQLWR  107 (124)
Q Consensus        81 G~G~~~~~G~~~l~~~~~~k~v~~~~~  107 (124)
                      |+|+.  +|.+++++|++.|+|+++++
T Consensus       466 G~G~~--~g~~~~~~ft~~k~v~~~~p  490 (494)
T d1o04a_         466 GSGRE--LGEYGLQAYTEVKTVTVKVP  490 (494)
T ss_dssp             EESCB--STGGGGGGGEEEEEEEEECS
T ss_pred             cCCch--hHHHHHHHhcCeEEEEEeCC
Confidence            99975  79999999999999999975

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=5.8e-26  Score=175.99  Aligned_cols=102  Identities=26%  Similarity=0.251  Sum_probs=87.8

Q ss_pred             ccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCCCC
Q psy10611          3 CYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFL   82 (124)
Q Consensus         3 i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~SG~   82 (124)
                      .++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+++.+. ++.|||+.+.+|.
T Consensus       305 ~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~-~~~~~g~g~~~G~  383 (414)
T d1o20a_         305 DWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFT-DGGQFGFGAEIGI  383 (414)
T ss_dssp             GTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC-STTTTTCSCCSCE
T ss_pred             cCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCC-CCCCCCCCCceec
Confidence            578999999999999999999999999999999999999999999999999999999999986553 4455665555554


Q ss_pred             C--CCCcCcHHHHHhcceeeEEEEe
Q psy10611         83 G--ENHFYGKQGFYFYTETKTVTQL  105 (124)
Q Consensus        83 G--~~~~~G~~~l~~~~~~k~v~~~  105 (124)
                      +  +.+.+|++|+++|++.|+|+++
T Consensus       384 ~~~~~~~~G~~gl~~~t~~K~vv~~  408 (414)
T d1o20a_         384 STQRFHARGPVGLRELTTYKFVVLG  408 (414)
T ss_dssp             ECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred             cCCCCCCCchhHHHHhCeEEEEEEC
Confidence            3  3233489999999999999865

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.85  E-value=2.9e-21  Score=153.03  Aligned_cols=97  Identities=13%  Similarity=0.158  Sum_probs=82.2

Q ss_pred             CCccccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHHhcc--eeeEEEcCCCCC------CCC
Q psy10611          1 MKCYKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTN--NGATARKFSQEID--CGQVGINVPIPV------PLS   70 (124)
Q Consensus         1 m~i~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~--d~~~~~~~~~~l~--ag~v~VN~~~~~------~~~   70 (124)
                      |++++||+||||++|++|+|+|||++++|+++|||+++|||+  |..++.+++++++  +|+|+||+.+..      ...
T Consensus       367 ~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~  446 (504)
T d1ez0a_         367 HPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVH  446 (504)
T ss_dssp             CGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCC
T ss_pred             chhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCC
Confidence            578999999999999999999999999999999999999996  6668999999886  899999986421      123


Q ss_pred             CCccCCccCCCCCCCCcCcHHHHHhcceee
Q psy10611         71 MFSFTGSRGSFLGENHFYGKQGFYFYTETK  100 (124)
Q Consensus        71 ~~pfgG~~~SG~G~~~~~G~~~l~~~~~~k  100 (124)
                      +.||||.+.||.++   .|..++++|+++.
T Consensus       447 ggpf~g~~~sg~~~---~G~~~i~~f~r~v  473 (504)
T d1ez0a_         447 GGPYPASTHSASTS---VGAEAIHRWLRPV  473 (504)
T ss_dssp             CCSTTSCSCSSCCS---SSGGGGGGGEEEE
T ss_pred             CCCCCCcCCCCCCc---chHHHHHHHhchh
Confidence            45788888888553   5999999998653

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=2e-20  Score=146.15  Aligned_cols=100  Identities=22%  Similarity=0.214  Sum_probs=71.0

Q ss_pred             cccCcccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcceeeEEEcCCCCCCCCCCccCCccCCCC-
Q psy10611          4 YKEEIFGPVLVCLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEIDCGQVGINVPIPVPLSMFSFTGSRGSFL-   82 (124)
Q Consensus         4 ~~eE~FgPv~~v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l~ag~v~VN~~~~~~~~~~pfgG~~~SG~-   82 (124)
                      |.+|+|+||++|++|+|+||||+++|++++|||++|||+|.+.+.+|++++++|.|+||+++.+. ++.+||-..+-|+ 
T Consensus       326 ~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~-Dg~~~g~g~e~Gis  404 (436)
T d1vlua_         326 FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFA-DGFRYGFGAEVGIS  404 (436)
T ss_dssp             ------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGC-C-------------
T ss_pred             hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccC-CCCcccCcceeeEe
Confidence            68999999999999999999999999999999999999999999999999999999999998774 5666663222233 


Q ss_pred             -CCCCcCcHHHHHhcceeeEEEE
Q psy10611         83 -GENHFYGKQGFYFYTETKTVTQ  104 (124)
Q Consensus        83 -G~~~~~G~~~l~~~~~~k~v~~  104 (124)
                       ++-+.+|+.|++.+|..|.+..
T Consensus       405 t~k~h~rGp~gl~~ltt~k~~~~  427 (436)
T d1vlua_         405 TSKIHARGPVGLDGLVSYQYQIR  427 (436)
T ss_dssp             ---------CCSGGGEEEEEEEE
T ss_pred             cCCCCCCCCcChHHhceEEEEEE
Confidence             4445679999999999998774

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=81.45  E-value=4.6  Score=29.88  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=53.3

Q ss_pred             EEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc-ceeeEEEcCCCC--------CCCCCCccCCccCCCCCCC
Q psy10611         15 CLTVDTLDEAISIINKNPYGNGTAIFTNNGATARKFSQEI-DCGQVGINVPIP--------VPLSMFSFTGSRGSFLGEN   85 (124)
Q Consensus        15 v~~~~~~~eai~~~n~~~~gl~~~vft~d~~~~~~~~~~l-~ag~v~VN~~~~--------~~~~~~pfgG~~~SG~G~~   85 (124)
                      ++.++|++||++++|..--=| ..|.++|+.   .+...+ .+|.|++...+.        ...+.+|-+|....     
T Consensus       304 ii~v~~~~ea~~~~N~~APEH-L~l~~~~~~---~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT~G~Ar~-----  374 (431)
T d1k75a_         304 LIVTKDLAQCVEISNQYGPEH-LIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTAT-----  374 (431)
T ss_dssp             EEECSSHHHHHHHHHHHCCSE-EEEESTTHH---HHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGT-----
T ss_pred             EEEecCHHHHHHHHHhhhHHH-HHHHhcCHH---HHHhhhhhcchhhcCCCCcchhhccccCCCccCCCCCceee-----
Confidence            567899999999999964443 457888875   466666 499999987542        23456777775432     


Q ss_pred             CcCcHHHHHhcceeeEEE
Q psy10611         86 HFYGKQGFYFYTETKTVT  103 (124)
Q Consensus        86 ~~~G~~~l~~~~~~k~v~  103 (124)
                        .+.-+...|+.+.++.
T Consensus       375 --~sgLsv~dF~k~~s~~  390 (431)
T d1k75a_         375 --CSSLGLADFQKRMTVQ  390 (431)
T ss_dssp             --CCCCCGGGGEEEEEEE
T ss_pred             --cCCCCHHHeeeeeeEE
Confidence              2333567777765544