Psyllid ID: psy10675

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIR
cccccEEEEEEEcHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccHHHHHHccccccccEEEEEHHHHHcccHHHHHHHHHHHcccccccccccccccccccEEcccccccHHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccEEEEEEcccccccEEEcccEEEEccccccccccccccc
cccccEEEEEEEccccHEEHHHHHHHcccccccccccccHHHHEcccccccccccHHcHHHHHHHHHHHHHHHHEcccEEEccccccEcccccEEEEEcccHHccccHHHHHHHHHHHccccEEcccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHcccccccccccccEEEEEEccccccccccccHEEEcccccccccHHHccc
MNASIRLLVIVRDPVTRAISDYTQLKIHaaatspgpvkrFEQLALREngeinenyRPIAVSMYHNFMYAWLEVSRVgvtkvrpathyqvfpkeqilivngdrliedpvpeLQRIERFlnlephinhdnfyfnhtkgfyclkdnsmerclreskgrkhvrvhPKVISKMRQYFNFHNQLFYdlvdenfdwpeesgSALVKINVnteqggltldedfivdlglepngpalaheir
MNASIRLLVIVRDPVTRAISDYTQLKihaaatspgpvKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPAthyqvfpkeqilivnGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLreskgrkhvrvhpkVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEpngpalaheir
MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIR
****IRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGL************
*NASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHE**
MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIR
**ASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPAL*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query233 2.2.26 [Sep-21-2011]
O35310311 Heparan sulfate glucosami yes N/A 0.729 0.546 0.473 5e-42
O14792307 Heparan sulfate glucosami yes N/A 0.733 0.557 0.460 7e-42
Q9ESG5311 Heparan sulfate glucosami yes N/A 0.729 0.546 0.468 2e-41
Q8BSL4346 Heparan sulfate glucosami no N/A 0.742 0.5 0.442 8e-39
Q8IZT8346 Heparan sulfate glucosami no N/A 0.742 0.5 0.437 1e-38
Q9Y661456 Heparan sulfate glucosami no N/A 0.738 0.377 0.4 1e-33
Q9Y278367 Heparan sulfate glucosami no N/A 0.721 0.457 0.381 1e-30
Q80W66367 Heparan sulfate glucosami no N/A 0.721 0.457 0.381 3e-30
Q673U1367 Heparan sulfate glucosami no N/A 0.721 0.457 0.381 3e-30
Q9QZS6390 Heparan sulfate glucosami no N/A 0.716 0.428 0.358 3e-28
>sp|O35310|HS3S1_MOUSE Heparan sulfate glucosamine 3-O-sulfotransferase 1 OS=Mus musculus GN=Hs3st1 PE=1 SV=1 Back     alignment and function desciption
 Score =  171 bits (432), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 117/190 (61%), Gaps = 20/190 (10%)

Query: 1   MNASIRLLVIVRDPVTRAISDYTQ-LKIHAAATSPGPVKRFEQLALRENGEINENYRPIA 59
           MN +IRLL+I+RDP  R +SDYTQ L  H     P P    E L +R+ G +N +Y+ + 
Sbjct: 140 MNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPP--IEDLLMRD-GRLNLDYKALN 196

Query: 60  VSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLN 119
            S+YH  M  WL                + FP   I IV+GDRLI DP PE+Q++ERFL 
Sbjct: 197 RSLYHAHMLNWL----------------RFFPLGHIHIVDGDRLIRDPFPEIQKVERFLK 240

Query: 120 LEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLF 179
           L P IN  NFYFN TKGFYCL+D+  +RCL ESKGR H +V PK++ K+ +YF+  N+ F
Sbjct: 241 LSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKF 300

Query: 180 YDLVDENFDW 189
           + LV   FDW
Sbjct: 301 FKLVGRTFDW 310
Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to position 3 of glucosamine residues in heparan. Catalyzes the rate limiting step in the biosynthesis of heparan sulfate (HSact). This modification is a crucial step in the biosynthesis of anticoagulant heparan sulfate as it completes the structure of the antithrombin pentasaccharide binding site.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 8EC: .EC: 2EC: .EC: 2EC: 3
>sp|O14792|HS3S1_HUMAN Heparan sulfate glucosamine 3-O-sulfotransferase 1 OS=Homo sapiens GN=HS3ST1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ESG5|HS3S1_RAT Heparan sulfate glucosamine 3-O-sulfotransferase 1 OS=Rattus norvegicus GN=Hs3st1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BSL4|HS3S5_MOUSE Heparan sulfate glucosamine 3-O-sulfotransferase 5 OS=Mus musculus GN=Hs3st5 PE=2 SV=1 Back     alignment and function description
>sp|Q8IZT8|HS3S5_HUMAN Heparan sulfate glucosamine 3-O-sulfotransferase 5 OS=Homo sapiens GN=HS3ST5 PE=1 SV=1 Back     alignment and function description
>sp|Q9Y661|HS3S4_HUMAN Heparan sulfate glucosamine 3-O-sulfotransferase 4 OS=Homo sapiens GN=HS3ST4 PE=2 SV=2 Back     alignment and function description
>sp|Q9Y278|HS3S2_HUMAN Heparan sulfate glucosamine 3-O-sulfotransferase 2 OS=Homo sapiens GN=HS3ST2 PE=1 SV=1 Back     alignment and function description
>sp|Q80W66|HS3S2_RAT Heparan sulfate glucosamine 3-O-sulfotransferase 2 OS=Rattus norvegicus GN=Hs3st2 PE=1 SV=1 Back     alignment and function description
>sp|Q673U1|HS3S2_MOUSE Heparan sulfate glucosamine 3-O-sulfotransferase 2 OS=Mus musculus GN=Hs3st2 PE=2 SV=2 Back     alignment and function description
>sp|Q9QZS6|HS3SB_MOUSE Heparan sulfate glucosamine 3-O-sulfotransferase 3B1 OS=Mus musculus GN=Hs3st3b1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
270013253 337 hypothetical protein TcasGA2_TC011833 [T 0.755 0.522 0.581 8e-62
91090820 363 PREDICTED: similar to heparan sulfate su 0.755 0.484 0.581 1e-61
332021446 359 Heparan sulfate glucosamine 3-O-sulfotra 0.755 0.490 0.553 2e-61
322800398 364 hypothetical protein SINV_07269 [Solenop 0.755 0.483 0.553 2e-61
307189005 362 Heparan sulfate glucosamine 3-O-sulfotra 0.755 0.486 0.556 4e-61
350405703 382 PREDICTED: heparan sulfate glucosamine 3 0.755 0.460 0.563 4e-61
340711164 382 PREDICTED: heparan sulfate glucosamine 3 0.755 0.460 0.563 4e-61
383852238 385 PREDICTED: heparan sulfate glucosamine 3 0.755 0.457 0.560 6e-61
328789959 390 PREDICTED: heparan sulfate glucosamine 3 0.755 0.451 0.537 1e-59
380013788 393 PREDICTED: heparan sulfate glucosamine 3 0.755 0.447 0.534 2e-59
>gi|270013253|gb|EFA09701.1| hypothetical protein TcasGA2_TC011833 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  242 bits (618), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 114/196 (58%), Positives = 145/196 (73%), Gaps = 20/196 (10%)

Query: 1   MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPG----PVKRFEQLALRENGEINENYR 56
           MNAS++LL+IVR+PVTRAISDYTQL+ +AA  SP     P + FE L++  NG INE YR
Sbjct: 158 MNASVKLLLIVREPVTRAISDYTQLRANAATASPTTSSPPPRSFESLSVFPNGSINEAYR 217

Query: 57  PIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIER 116
           P+A+S+YHN+++ WLEV                FP+EQIL+VNGD LIEDPVP++Q+IER
Sbjct: 218 PLAISLYHNYLHRWLEV----------------FPREQILVVNGDLLIEDPVPQVQKIER 261

Query: 117 FLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHN 176
           FL LEP I   NFYFN TKGFYCL++ + +RCLRE+KGRKH RV P V+ K+R+YF  HN
Sbjct: 262 FLGLEPRIGTHNFYFNETKGFYCLRNETSDRCLRETKGRKHPRVDPNVVGKLRRYFGEHN 321

Query: 177 QLFYDLVDENFDWPEE 192
           Q FY+L+ E+  WPEE
Sbjct: 322 QKFYELIGEDLGWPEE 337

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91090820|ref|XP_971545.1| PREDICTED: similar to heparan sulfate sulfotransferase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332021446|gb|EGI61814.1| Heparan sulfate glucosamine 3-O-sulfotransferase 5 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322800398|gb|EFZ21402.1| hypothetical protein SINV_07269 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307189005|gb|EFN73522.1| Heparan sulfate glucosamine 3-O-sulfotransferase 5 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|350405703|ref|XP_003487523.1| PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340711164|ref|XP_003394150.1| PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383852238|ref|XP_003701635.1| PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328789959|ref|XP_396407.3| PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5 [Apis mellifera] Back     alignment and taxonomy information
>gi|380013788|ref|XP_003690929.1| PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
FB|FBgn0053147605 Hs3st-A "Heparan sulfate 3-O s 0.630 0.242 0.509 8.7e-53
UNIPROTKB|Q0VD21345 HS3ST5 "Heparan sulfate (Gluco 0.742 0.501 0.447 1e-36
UNIPROTKB|E2QTV5345 HS3ST5 "Uncharacterized protei 0.742 0.501 0.447 1e-36
MGI|MGI:2441996346 Hs3st5 "heparan sulfate (gluco 0.742 0.5 0.447 1e-36
UNIPROTKB|Q8IZT8346 HS3ST5 "Heparan sulfate glucos 0.742 0.5 0.442 1.3e-36
UNIPROTKB|F1RZK7345 HS3ST5 "Uncharacterized protei 0.742 0.501 0.442 1.3e-36
UNIPROTKB|E1C2F0345 HS3ST5 "Uncharacterized protei 0.742 0.501 0.447 1.7e-36
RGD|1306379346 Hs3st5 "heparan sulfate (gluco 0.742 0.5 0.442 2.1e-36
UNIPROTKB|O14792307 HS3ST1 "Heparan sulfate glucos 0.553 0.420 0.468 6e-32
UNIPROTKB|Q0VCB5312 HS3ST1 "Uncharacterized protei 0.553 0.413 0.462 9.8e-32
FB|FBgn0053147 Hs3st-A "Heparan sulfate 3-O sulfotransferase-A" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 438 (159.2 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 83/163 (50%), Positives = 115/163 (70%)

Query:    30 AATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTKVRPATHYQV 89
             A+ +    K FE+LA+  NG +NE YRP+++SMYH  ++ WLEV                
Sbjct:   459 ASAAQMAAKSFEELAIFPNGTVNEAYRPLSISMYHVHLHRWLEV---------------- 502

Query:    90 FPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCL 149
             FP+EQ+L+VNGDRLIEDPV +L+RIE FL +E  +N ++FYFN TKGFYCL+ ++ +RCL
Sbjct:   503 FPREQLLVVNGDRLIEDPVSQLKRIEAFLGIEHRVNSEHFYFNETKGFYCLRYDNGDRCL 562

Query:   150 RESKGRKHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWPEE 192
             RE+KGRKH  V P V+S++R++F  +NQ FY+LV E+  WPEE
Sbjct:   563 RETKGRKHPHVDPVVVSRLRKFFAEYNQRFYELVGEDLGWPEE 605
GO:0008467 "[heparan sulfate
UNIPROTKB|Q0VD21 HS3ST5 "Heparan sulfate (Glucosamine) 3-O-sulfotransferase 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QTV5 HS3ST5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2441996 Hs3st5 "heparan sulfate (glucosamine) 3-O-sulfotransferase 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IZT8 HS3ST5 "Heparan sulfate glucosamine 3-O-sulfotransferase 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZK7 HS3ST5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1C2F0 HS3ST5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1306379 Hs3st5 "heparan sulfate (glucosamine) 3-O-sulfotransferase 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O14792 HS3ST1 "Heparan sulfate glucosamine 3-O-sulfotransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCB5 HS3ST1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.8.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
pfam05694461 pfam05694, SBP56, 56kDa selenium binding protein ( 1e-13
pfam00685254 pfam00685, Sulfotransfer_1, Sulfotransferase domai 4e-11
>gnl|CDD|218697 pfam05694, SBP56, 56kDa selenium binding protein (SBP56) Back     alignment and domain information 
 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 6/67 (8%)

Query: 169 RQYFNFHNQLFYDLVDENFDWPE--ESGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGP 226
           R Y    N L Y   D+ F +P+  + G  ++KI+V+ + GGL+LD +F VD G EP+GP
Sbjct: 387 RLYVT--NSL-YSAWDDQF-YPDGVKKGGWMLKIDVDPDNGGLSLDPNFFVDFGKEPDGP 442

Query: 227 ALAHEIR 233
           A AHEIR
Sbjct: 443 ARAHEIR 449

This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins, in vesicular Golgi transport. Length = 461
>gnl|CDD|216059 pfam00685, Sulfotransfer_1, Sulfotransferase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 233
KOG3704|consensus360 100.0
KOG3703|consensus873 99.93
PLN02164346 sulfotransferase 99.6
KOG1584|consensus297 99.59
PF00685267 Sulfotransfer_1: Sulfotransferase domain; InterPro 99.47
PF05694461 SBP56: 56kDa selenium binding protein (SBP56); Int 98.82
KOG0918|consensus476 98.66
PF09037245 Sulphotransf: Stf0 sulphotransferase; InterPro: IP 97.48
PF13469215 Sulfotransfer_3: Sulfotransferase family; PDB: 3AP 97.33
KOG3988|consensus378 96.49
PF03567253 Sulfotransfer_2: Sulfotransferase family; InterPro 93.36
KOG3922|consensus361 83.6
>KOG3704|consensus Back     alignment and domain information 
Probab=100.00  E-value=6.2e-40  Score=288.59  Aligned_cols=169  Identities=45%  Similarity=0.851  Sum_probs=157.5

Q ss_pred             CCCCceEEEEeeccccchhhhhhhhHhhccCCCCCCccCHHHHHHh--hcCCccCCCccccccchHHHHHHHHHhhhccc
Q psy10675          1 MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALR--ENGEINENYRPIAVSMYHNFMYAWLEVSRVGV   78 (233)
Q Consensus         1 ~~p~~KiI~ilRdPv~Ra~S~y~~~~~~~~~~~~~~~~~f~~~~~~--~~g~~~~~~~~i~~g~Y~~~l~~w~~~~~~~~   78 (233)
                      |||++|+|+|+||||.||+|+|.+...+..     +..+|+.+.-.  ..|.++.+|..+.+|.|+.||++|++      
T Consensus       187 M~pd~KLivvvR~PvtRaiSDyTQt~sk~~-----~~P~fe~lafkn~~~g~id~~w~ai~iglY~~Hle~WL~------  255 (360)
T KOG3704|consen  187 MNPDTKLIVVVRDPVTRAISDYTQTLSKKP-----DIPTFEVLAFKNRTAGLIDTSWKAIRIGLYAVHLENWLR------  255 (360)
T ss_pred             cCCCceEEEEEcCchhhhHHHHHHHHhcCC-----CCCceeeeeeecCccceeecchhhhhhhHHHHHHHHHHH------
Confidence            899999999999999999999999887543     56788876533  35778999999999999999999999      


Q ss_pred             ccccCccccccCCCCcEEEEeccccccCCHHHHHHHHHhhCCCCCCCCCCeeeccCCCcccccC---CcchhhhhhccCC
Q psy10675         79 TKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKD---NSMERCLRESKGR  155 (233)
Q Consensus        79 ~~~~~~~~~~~Fp~eqilvl~~Edl~~dP~~~l~~I~~FLGl~~~~~~~~~~~n~~~g~~~~~~---~s~~~~l~~~kgr  155 (233)
                                +||-.|||+|++|.|+.||..++.+|++||||...+.+++|+||.+|||+|++.   .+.++||+++|||
T Consensus       256 ----------yFpL~q~lfVsGerli~dPa~E~~rVqdFLgLkr~it~khfyFnktKGFpClkK~e~ss~prCLgksKgr  325 (360)
T KOG3704|consen  256 ----------YFPLRQILFVSGERLISDPAGELGRVQDFLGLKRVITDKHFYFNKTKGFPCLKKAEDSSRPRCLGKSKGR  325 (360)
T ss_pred             ----------hCchhheEEecCceeecCcHHHHHHHHHHhcccceeccceeEEecCCCceeeeccccCCCccccccccCC
Confidence                      999999999999999999999999999999999999999999999999999985   4689999999999


Q ss_pred             CCCCCCHHHHHHHHhhhHHHHHHHHHHhCCCCCCC
Q psy10675        156 KHVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWP  190 (233)
Q Consensus       156 ~~~~l~~~~~~~L~~~y~p~~~~L~~llg~~~~W~  190 (233)
                      .||.++++++.+|++||+|+|.+|++++|.+|.|.
T Consensus       326 ~hp~idp~~i~rLrefyrpfN~kFyq~tG~dF~W~  360 (360)
T KOG3704|consen  326 THPHIDPEVIRRLREFYRPFNLKFYQMTGQDFGWE  360 (360)
T ss_pred             CCCCCCHHHHHHHHHHhcchhhhHHHhhccccCCC
Confidence            99999999999999999999999999999999994

>KOG3703|consensus Back     alignment and domain information
>PLN02164 sulfotransferase Back     alignment and domain information
>KOG1584|consensus Back     alignment and domain information
>PF00685 Sulfotransfer_1: Sulfotransferase domain; InterPro: IPR000863 This family includes a range of sulphotransferase proteins including flavonyl 3-sulphotransferase, aryl sulphotransferase, alcohol sulphotransferase, oestrogen sulphotransferase and phenol-sulphating phenol sulphotransferase Back     alignment and domain information
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea Back     alignment and domain information
>KOG0918|consensus Back     alignment and domain information
>PF09037 Sulphotransf: Stf0 sulphotransferase; InterPro: IPR024628 Members of this family are essential for the biosynthesis of sulpholipid-1 in prokaryotes Back     alignment and domain information
>PF13469 Sulfotransfer_3: Sulfotransferase family; PDB: 3AP1_B 3AP3_B 3AP2_B 3RNL_A 2Z6V_A 2ZQ5_A Back     alignment and domain information
>KOG3988|consensus Back     alignment and domain information
>PF03567 Sulfotransfer_2: Sulfotransferase family; InterPro: IPR005331 This entry consists of a number of carbohydrate sulphotransferases that transfer sulphate to carbohydrate groups in glycoproteins and glycolipids Back     alignment and domain information
>KOG3922|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
1vkj_A285 Crystal Structure Of Heparan Sulfate 3-O-Sulfotrans 4e-43
3uan_A269 Crystal Structure Of 3-O-Sulfotransferase (3-Ost-1) 5e-43
1zrh_A274 Crystal Structure Of Human Heparan Sulfate Glucosam 7e-43
3bd9_A280 Human 3-O-Sulfotransferase Isoform 5 With Bound Pap 7e-40
1t8t_A271 Crystal Structure Of Human 3-O-Sulfotransferase-3 W 6e-29
1t8u_A272 Crystal Structure Of Human 3-O-Sulfotransferase-3 W 6e-29
1nst_A325 The Sulfotransferase Domain Of Human Haparin Sulfat 1e-06
>pdb|1VKJ|A Chain A, Crystal Structure Of Heparan Sulfate 3-O-Sulfotransferase Isoform 1 In The Presence Of Pap Length = 285 Back     alignment and structure 
Iteration: 1

 Score =  171 bits (432), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 117/190 (61%), Gaps = 20/190 (10%)
Query: 1   MNASIRLLVIVRDPVTRAISDYTQ-LKIHAAATSPGPVKRFEQLALRENGEINENYRPIA 59
           MN +IRLL+I+RDP  R +SDYTQ L  H     P P    E L +R+ G +N +Y+ + 
Sbjct: 114 MNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPP--IEDLLMRD-GRLNLDYKALN 170
Query: 60  VSMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLN 119
            S+YH  M  WL                + FP   I IV+GDRLI DP PE+Q++ERFL 
Sbjct: 171 RSLYHAHMLNWL----------------RFFPLGHIHIVDGDRLIRDPFPEIQKVERFLK 214
Query: 120 LEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLF 179
           L P IN  NFYFN TKGFYCL+D+  +RCL ESKGR H +V PK++ K+ +YF+  N+ F
Sbjct: 215 LSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKF 274
Query: 180 YDLVDENFDW 189
           + LV   FDW
Sbjct: 275 FKLVGRTFDW 284
>pdb|3UAN|A Chain A, Crystal Structure Of 3-O-Sulfotransferase (3-Ost-1) With Bound Pap And Heptasaccharide Substrate Length = 269 Back     alignment and structure
>pdb|1ZRH|A Chain A, Crystal Structure Of Human Heparan Sulfate Glucosamine 3-O- Sulfotransferase 1 In Complex With Pap Length = 274 Back     alignment and structure
>pdb|3BD9|A Chain A, Human 3-O-Sulfotransferase Isoform 5 With Bound Pap Length = 280 Back     alignment and structure
>pdb|1T8T|A Chain A, Crystal Structure Of Human 3-O-Sulfotransferase-3 With Bound Pap Length = 271 Back     alignment and structure
>pdb|1T8U|A Chain A, Crystal Structure Of Human 3-O-Sulfotransferase-3 With Bound Pap And Tetrasaccharide Substrate Length = 272 Back     alignment and structure
>pdb|1NST|A Chain A, The Sulfotransferase Domain Of Human Haparin Sulfate N- DeacetylaseN-Sulfotransferase Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
3uan_A269 Heparan sulfate glucosamine 3-O-sulfotransferase; 2e-39
3bd9_A280 Heparan sulfate glucosamine 3-O-sulfotransferase 5 2e-37
1t8t_A271 Heparan sulfate D-glucosaminyl 3-O- sulfotransfera 6e-35
1nst_A325 NST1, heparan sulfate N-deacetylase/N-sulfotransfe 9e-29
3rnl_A311 Sulfotransferase; structural genomics, PSI-biology 1e-21
2ece_A462 462AA long hypothetical selenium-binding protein; 4e-05
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A* Length = 269 Back     alignment and structure
 Score =  136 bits (342), Expect = 2e-39
 Identities = 84/189 (44%), Positives = 111/189 (58%), Gaps = 18/189 (9%)

Query: 1   MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAV 60
           MN +IRLL+I+RDP  R +SDYTQ+                +  L  +G +N +Y+ +  
Sbjct: 98  MNPTIRLLLILRDPSERVLSDYTQV--LYNHLQKHKPYPPIEDLLMRDGRLNLDYKALNR 155

Query: 61  SMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNL 120
           S+YH  M  WL                  FP   I IV+GDRLI DP PE+Q++ERFL L
Sbjct: 156 SLYHAHMLNWLRF----------------FPLGHIHIVDGDRLIRDPFPEIQKVERFLKL 199

Query: 121 EPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFY 180
            P IN  NFYFN TKGFYCL+D+  +RCL ESKGR H +V PK++ K+ +YF+  N+ F+
Sbjct: 200 SPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKFF 259

Query: 181 DLVDENFDW 189
            LV   FDW
Sbjct: 260 KLVGRTFDW 268
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens} Length = 280 Back     alignment and structure
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A* Length = 271 Back     alignment and structure
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5 Length = 325 Back     alignment and structure
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp} Length = 311 Back     alignment and structure
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} Length = 462 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
3uan_A269 Heparan sulfate glucosamine 3-O-sulfotransferase; 100.0
3bd9_A280 Heparan sulfate glucosamine 3-O-sulfotransferase 5 100.0
1t8t_A271 Heparan sulfate D-glucosaminyl 3-O- sulfotransfera 99.97
1nst_A325 NST1, heparan sulfate N-deacetylase/N-sulfotransfe 99.95
3rnl_A311 Sulfotransferase; structural genomics, PSI-biology 99.95
1aqu_A297 EST, estrogen sulfotransferase; PAP, sulfonation, 99.71
1q1q_A350 SULT2B1A, sulfotransferase family, cytosolic, 2B, 99.68
1j99_A293 Alcohol sulfotransferase; dehydroepiandosterone, D 99.66
1q20_A299 SULT2B1B, sulfotransferase family, cytosolic, 2B, 99.65
1ls6_A295 ARYL sulfotransferase; SULT 1A1, PAP, P-nitropheno 99.65
2reo_A305 Putative sulfotransferase 1C3; sulfate conjugation 99.63
3ckl_A298 Sulfotransferase family cytosolic 1B member 1; SUL 99.63
2zpt_X295 Tyrosine-ester sulfotransferase; SULT1D1, catechol 99.59
2gwh_A298 Sulfotransferase 1C2; sulfate conjugation, pentach 99.59
1zd1_A284 Sulfotransferase 4A1; SGC, SULT4A1, structural gen 99.58
3bfx_A296 Sulfotransferase 1C2; PAP, structural genomics, PS 99.58
2ov8_A288 STAL; sulfotransferase, structural genomics, montr 99.55
1fmj_A351 Retinol dehydratase; sulfotransferase, adenosine 3 99.51
1q44_A326 RARO47, steroid sulfotransferase, AT2G03760/; APO, 99.51
4gox_A313 Polyketide synthase; olefin synthase, hydrocarbon, 99.37
3mgb_A319 TEG12; sulfotransferase, glycopeptide, antibiotic, 99.34
3ap1_A337 Protein-tyrosine sulfotransferase 2; sulfotransfer 99.32
4gbm_A323 CURM sulfotransferase; polyketide synthase, curaci 99.3
2zq5_A384 Putative uncharacterized protein; sulfotransferase 99.28
2z6v_A414 Putative uncharacterized protein; sulfotransferase 99.2
1tex_A287 STF0 sulfotransferase; sulfolipid, sulfation, TREH 98.68
2ece_A462 462AA long hypothetical selenium-binding protein; 95.74
3f5f_A658 Maltose-binding periplasmic protein, heparan sulfa 91.68
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A* Back     alignment and structure
Probab=100.00  E-value=8e-38  Score=277.12  Aligned_cols=172  Identities=51%  Similarity=0.975  Sum_probs=151.7

Q ss_pred             CCCCceEEEEeeccccchhhhhhhhHhhccCCCCCCccCHHHHHHhhcCCccCCCccccccchHHHHHHHHHhhhccccc
Q psy10675          1 MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAVSMYHNFMYAWLEVSRVGVTK   80 (233)
Q Consensus         1 ~~p~~KiI~ilRdPv~Ra~S~y~~~~~~~~~~~~~~~~~f~~~~~~~~g~~~~~~~~i~~g~Y~~~l~~w~~~~~~~~~~   80 (233)
                      ++|++|||+|+|||+|||+|+|+|...++... .....+|++++.. +|.++..+.++..|.|.+||+.|++        
T Consensus        98 ~~P~aKiI~vlRnPvDra~S~y~~~~~~~~~~-~~~~~sfe~~~~~-~g~~~~~~~~l~~g~Y~~~l~~w~~--------  167 (269)
T 3uan_A           98 MNPTIRLLLILRDPSERVLSDYTQVLYNHLQK-HKPYPPIEDLLMR-DGRLNLDYKALNRSLYHAHMLNWLR--------  167 (269)
T ss_dssp             HCTTCEEEEEECCHHHHHHHHHHHHHHHHHHT-TCCCCCHHHHHBC---CBCTTCHHHHHTCHHHHHHHHHT--------
T ss_pred             hCCCCcEEEEEcCHHHHHHHHHHHHHhhcccc-cCCccCHHHHHHh-cCCccccccccccchHHHHHHHHHH--------
Confidence            47999999999999999999999987432111 1245689988753 4555556677889999999999999        


Q ss_pred             ccCccccccCCCCcEEEEeccccccCCHHHHHHHHHhhCCCCCCCCCCeeeccCCCcccccCCcchhhhhhccCCCCCCC
Q psy10675         81 VRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRV  160 (233)
Q Consensus        81 ~~~~~~~~~Fp~eqilvl~~Edl~~dP~~~l~~I~~FLGl~~~~~~~~~~~n~~~g~~~~~~~s~~~~l~~~kgr~~~~l  160 (233)
                              +||++||++|.||||++||..++++|++|||+++.+.++.+.+|.++|++|++..+.++|++++|||.+++|
T Consensus       168 --------~~~~~~il~v~yEdl~~dp~~~~~~i~~FLGl~~~~~~~~~~~~~~kg~~c~~~~~~~~cl~~skgr~~~~~  239 (269)
T 3uan_A          168 --------FFPLGHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQV  239 (269)
T ss_dssp             --------TSCGGGEEEEEHHHHHHCHHHHHHHHHHHTTCCSCCCGGGEEEETTTTEEEEEETTEEECCCTTSSCCCCCC
T ss_pred             --------hCCccceEEEEHHHHHHCHHHHHHHHHHHhCCCCCcChhhhhcccccCceeecccccccccccccCCcCCCC
Confidence                    999999999999999999999999999999999998888899999999999987777789999999999999


Q ss_pred             CHHHHHHHHhhhHHHHHHHHHHhCCCCCCC
Q psy10675        161 HPKVISKMRQYFNFHNQLFYDLVDENFDWP  190 (233)
Q Consensus       161 ~~~~~~~L~~~y~p~~~~L~~llg~~~~W~  190 (233)
                      +++++++|++||+|+|++|++++|++|+|.
T Consensus       240 ~~~~r~~L~~~f~p~n~~L~~llg~~~~W~  269 (269)
T 3uan_A          240 DPKLLDKLHEYFHEPNKKFFKLVGRTFDWH  269 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCcCCCCC
Confidence            999999999999999999999999999994
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens} Back     alignment and structure
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A* Back     alignment and structure
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5 Back     alignment and structure
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A* 1g3m_A* Back     alignment and structure
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5 Back     alignment and structure
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND; 1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A* 2qp3_A* 2qp4_A* 1efh_A* Back     alignment and structure
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A* Back     alignment and structure
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive cooperativity, two substrate binding sites; HET: A3P NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A* 3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A* 3qvu_A* 1z29_A* 1cjm_A 2a3r_A* Back     alignment and structure
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens} PDB: 2h8k_A* Back     alignment and structure
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human cytosolic sulfotransferase, resveratrol, SGC, cytoplasm, lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens} PDB: 2z5f_A* Back     alignment and structure
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine, sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB: 2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X* Back     alignment and structure
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA pesticide, structural genomics, structural genomics consort transferase; HET: A3P PCI; 1.80A {Homo sapiens} PDB: 2ad1_A* Back     alignment and structure
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural genomics conso transferase; 2.24A {Homo sapiens} Back     alignment and structure
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein structure initiative, structural genomics consortium, SGC, alternative splicing; HET: A3P; 1.80A {Homo sapiens} SCOP: c.37.1.5 Back     alignment and structure
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston bacterial structural genomics initiative, BSGI, UN function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A 2ovf_A* Back     alignment and structure
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'- diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda} SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A* Back     alignment and structure
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A Back     alignment and structure
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP} Back     alignment and structure
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A* Back     alignment and structure
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A* Back     alignment and structure
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta} Back     alignment and structure
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown function; HET: PLM; 2.60A {Mycobacterium avium} Back     alignment and structure
>1tex_A STF0 sulfotransferase; sulfolipid, sulfation, TREH trehalose-2-sulfate; HET: TRE; 2.60A {Mycobacterium smegmatis} SCOP: c.37.1.5 Back     alignment and structure
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} Back     alignment and structure
>3f5f_A Maltose-binding periplasmic protein, heparan sulfate 2-O-sulfotransferase 1; maltose binding protein, fusion, heparan sulfate biosynthesis; HET: GLC A3P; 2.65A {Escherichia coli k-12} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 233
d1vkja_258 c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase 4e-30
d1t8ta_271 c.37.1.5 (A:) Heparan sulfate glucosamine 3-O-sulf 5e-24
d1nsta_301 c.37.1.5 (A:) Heparan sulfate N-deacetylase/N-sulf 2e-21
d1texa_265 c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium 0.002
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: PAPS sulfotransferase
domain: Heparan sulfate 3-O-sulfotransferase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  110 bits (275), Expect = 4e-30
 Identities = 83/189 (43%), Positives = 112/189 (59%), Gaps = 18/189 (9%)

Query: 1   MNASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRENGEINENYRPIAV 60
           MN +IRLL+I+RDP  R +SDYTQ+  +             +  L  +G +N +Y+ +  
Sbjct: 87  MNPTIRLLLILRDPSERVLSDYTQVLYNH--LQKHKPYPPIEDLLMRDGRLNLDYKALNR 144

Query: 61  SMYHNFMYAWLEVSRVGVTKVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNL 120
           S+YH  M  W                 + FP   I IV+GDRLI DP PE+Q++ERFL L
Sbjct: 145 SLYHAHMLNW----------------LRFFPLGHIHIVDGDRLIRDPFPEIQKVERFLKL 188

Query: 121 EPHINHDNFYFNHTKGFYCLKDNSMERCLRESKGRKHVRVHPKVISKMRQYFNFHNQLFY 180
            P IN  NFYFN TKGFYCL+D+  +RCL ESKGR H +V PK++ K+ +YF+  N+ F+
Sbjct: 189 SPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKFF 248

Query: 181 DLVDENFDW 189
            LV   FDW
Sbjct: 249 KLVGRTFDW 257
>d1t8ta_ c.37.1.5 (A:) Heparan sulfate glucosamine 3-O-sulfotransferase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 Back     information, alignment and structure
>d1nsta_ c.37.1.5 (A:) Heparan sulfate N-deacetylase/N-sulfotransferase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 301 Back     information, alignment and structure
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]} Length = 265 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
d1t8ta_271 Heparan sulfate glucosamine 3-O-sulfotransferase 3 99.96
d1vkja_258 Heparan sulfate 3-O-sulfotransferase {Mouse (Mus m 99.96
d1nsta_301 Heparan sulfate N-deacetylase/N-sulfotransferase d 99.92
d3bfxa1285 Sulfotransferase Sult1c2 {Human (Homo sapiens) [Ta 99.41
d1j99a_284 Hydroxysteroid sulfotransferase sult2a1 {Human (Ho 99.41
d1g3ma_290 Estrogen sulfotransferase (STE, sult1e1) {Human (H 99.37
d2z5fa_293 Thyroid hormone sulfotransferase Sult1b1 {Human (H 99.35
d1ls6a_288 Aryl sulfotransferase sult1a {Human (Homo sapiens) 99.33
d1fmja_342 Retinol dehydratase {Fall armyworm (Spodoptera fru 99.32
d1q44a_320 Putative steroid sulfotransferase rarO47 {Thale cr 99.27
d1q20a_294 Cholesterol sulfotransferase sult2b1b {Human (Homo 99.21
d1texa_265 Stf0 sulfotransferase {Mycobacterium smegmatis [Ta 98.9
>d1t8ta_ c.37.1.5 (A:) Heparan sulfate glucosamine 3-O-sulfotransferase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: PAPS sulfotransferase
domain: Heparan sulfate glucosamine 3-O-sulfotransferase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.4e-30  Score=220.26  Aligned_cols=168  Identities=40%  Similarity=0.803  Sum_probs=141.8

Q ss_pred             CCCceEEEEeeccccchhhhhhhhHhhccCCCCCCccCHHHHHHhh--cCCccCCCccccccchHHHHHHHHHhhhcccc
Q psy10675          2 NASIRLLVIVRDPVTRAISDYTQLKIHAAATSPGPVKRFEQLALRE--NGEINENYRPIAVSMYHNFMYAWLEVSRVGVT   79 (233)
Q Consensus         2 ~p~~KiI~ilRdPv~Ra~S~y~~~~~~~~~~~~~~~~~f~~~~~~~--~g~~~~~~~~i~~g~Y~~~l~~w~~~~~~~~~   79 (233)
                      +|++|+|+|+|||++|++|+|.|....+.     ...+|+++....  .+..+..+.++..|.|..+|+.|++       
T Consensus        98 ~p~~kiI~i~RdP~dr~~S~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~~~l~~~~~-------  165 (271)
T d1t8ta_          98 SKDTKLIVVVRDPVTRAISDYTQTLSKRP-----DIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLR-------  165 (271)
T ss_dssp             CTTCEEEEEECCHHHHHHHHHHHHHHHCT-----TSCCHHHHHBCC---CCBCTTSHHHHTTCHHHHHHHHTT-------
T ss_pred             cccceEEEEeCCHHHHHHHHHHHHHhcCC-----CccCHHHHHHHHHHHhhhccchhhhcccHHHHHHHHHHH-------
Confidence            58999999999999999999999887765     466787765431  1223334567888999999999999       


Q ss_pred             cccCccccccCCCCcEEEEeccccccCCHHHHHHHHHhhCCCCCCCCCCeeeccCCCcccccCC---cchhhhhhccCCC
Q psy10675         80 KVRPATHYQVFPKEQILIVNGDRLIEDPVPELQRIERFLNLEPHINHDNFYFNHTKGFYCLKDN---SMERCLRESKGRK  156 (233)
Q Consensus        80 ~~~~~~~~~~Fp~eqilvl~~Edl~~dP~~~l~~I~~FLGl~~~~~~~~~~~n~~~g~~~~~~~---s~~~~l~~~kgr~  156 (233)
                               +|+++||++|.||||++||..++++||+||||++......+.+|.+++..+....   ....++...+++.
T Consensus       166 ---------~f~~~~il~v~YEdL~~~p~~~l~ki~~FLgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (271)
T d1t8ta_         166 ---------HFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRT  236 (271)
T ss_dssp             ---------TSCGGGEEEEEHHHHHHCHHHHHHHHHHHHTCCCCCCGGGEEEETTTTEEEESSCTTCSSCBCCCTTSSCC
T ss_pred             ---------HcCcccchhhHHHHHHHhHHHHHHHHHHHcCCCccchhhhhhhcccccchhhccccccccchhhhhhcccC
Confidence                     9999999999999999999999999999999998877778888888776665432   2334566778888


Q ss_pred             CCCCCHHHHHHHHhhhHHHHHHHHHHhCCCCCCC
Q psy10675        157 HVRVHPKVISKMRQYFNFHNQLFYDLVDENFDWP  190 (233)
Q Consensus       157 ~~~l~~~~~~~L~~~y~p~~~~L~~llg~~~~W~  190 (233)
                      ++.|+++++++|++||+|+|++|++++|++++|.
T Consensus       237 ~~~~~~~~~~~L~~~f~~~~~~L~~llg~~~~W~  270 (271)
T d1t8ta_         237 HPEIDREVVRRLREFYRPFNLKFYQMTGHDFGWD  270 (271)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHTCCCCSC
T ss_pred             CCCCCHHHHHHHHHHhHHHHHHHHHHhCCCCCCC
Confidence            8999999999999999999999999999999996
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nsta_ c.37.1.5 (A:) Heparan sulfate N-deacetylase/N-sulfotransferase domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]} Back     information, alignment and structure
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]} Back     information, alignment and structure