Psyllid ID: psy10899
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| 307189403 | 244 | Cation transport regulator-like protein | 0.880 | 0.786 | 0.381 | 7e-34 | |
| 242012615 | 307 | conserved hypothetical protein [Pediculu | 0.908 | 0.644 | 0.380 | 7e-34 | |
| 195158553 | 295 | GL13659 [Drosophila persimilis] gi|19411 | 0.871 | 0.644 | 0.391 | 8e-34 | |
| 125773135 | 295 | GA10276 [Drosophila pseudoobscura pseudo | 0.784 | 0.579 | 0.417 | 2e-33 | |
| 350407840 | 247 | PREDICTED: cation transport regulator-li | 0.880 | 0.777 | 0.378 | 4e-33 | |
| 383848650 | 247 | PREDICTED: cation transport regulator-li | 0.880 | 0.777 | 0.377 | 1e-32 | |
| 195391648 | 292 | GJ22788 [Drosophila virilis] gi|19415255 | 0.784 | 0.585 | 0.412 | 1e-32 | |
| 194745859 | 289 | GF16257 [Drosophila ananassae] gi|190628 | 0.784 | 0.591 | 0.407 | 2e-32 | |
| 91093909 | 251 | PREDICTED: similar to conserved hypothet | 0.811 | 0.705 | 0.384 | 8e-32 | |
| 340721892 | 246 | PREDICTED: cation transport regulator-li | 0.880 | 0.780 | 0.365 | 1e-31 |
| >gi|307189403|gb|EFN73813.1| Cation transport regulator-like protein 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 23/215 (10%)
Query: 10 GNSSTRTRVRYFGHILS----TRSIVWGRAFLVSGKSAVPYLHTREGTLGGYKTSFEQFY 65
GN++ R + G + + +V+GRAF V A+ YL RE LGGY T+ F+
Sbjct: 46 GNTTHRGTIEKPGRVATLIEDKEGVVYGRAFQVQDNEALSYLENRECALGGYLTTIATFH 105
Query: 66 PKDHSDQSSSSEDGLSETSQPIRTMMFIACPTNSMWLGEAPLHEIANQIVSCKGPSGHNA 125
+D Q S +++IA N WLGEA L IA+QI+ C G SGHN
Sbjct: 106 SRDEGKQFS--------------VIIYIATNKNEQWLGEASLQNIAHQIIECSGQSGHNV 151
Query: 126 EYVLRLAIFMRENIPDAHVHDPELFTLEIMIRSRLKEKKIPLHVIMGEE---APSDSTSN 182
EY+LRLA FM +P+A HD LFTLE+++RSR+KE+ + L +MG D +
Sbjct: 152 EYLLRLADFMHRYLPEA--HDEHLFTLEMLVRSRIKEENMCLATLMGNRDFVIDLDEDAE 209
Query: 183 ASSSYQDDLDVRPVSRRSFDFTARLPNKNLRCVNI 217
+ + + + + RP SF F+AR+P+K+LRCV +
Sbjct: 210 PAGNERAEANDRPPRENSFQFSARIPSKSLRCVKM 244
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242012615|ref|XP_002427025.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212511270|gb|EEB14287.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|195158553|ref|XP_002020150.1| GL13659 [Drosophila persimilis] gi|194116919|gb|EDW38962.1| GL13659 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
| >gi|125773135|ref|XP_001357826.1| GA10276 [Drosophila pseudoobscura pseudoobscura] gi|54637559|gb|EAL26961.1| GA10276 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
| >gi|350407840|ref|XP_003488209.1| PREDICTED: cation transport regulator-like protein 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|383848650|ref|XP_003699961.1| PREDICTED: cation transport regulator-like protein 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|195391648|ref|XP_002054472.1| GJ22788 [Drosophila virilis] gi|194152558|gb|EDW67992.1| GJ22788 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
| >gi|194745859|ref|XP_001955402.1| GF16257 [Drosophila ananassae] gi|190628439|gb|EDV43963.1| GF16257 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|91093909|ref|XP_970018.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270014507|gb|EFA10955.1| hypothetical protein TcasGA2_TC004115 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|340721892|ref|XP_003399347.1| PREDICTED: cation transport regulator-like protein 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| ZFIN|ZDB-GENE-030131-1957 | 196 | chac1 "ChaC, cation transport | 0.527 | 0.586 | 0.398 | 5.1e-19 | |
| UNIPROTKB|A6H738 | 219 | CHAC1 "Uncharacterized protein | 0.449 | 0.447 | 0.412 | 1.3e-15 | |
| UNIPROTKB|E2R9S1 | 262 | CHAC1 "Uncharacterized protein | 0.449 | 0.374 | 0.412 | 1.3e-15 | |
| UNIPROTKB|Q9BUX1 | 264 | CHAC1 "Cation transport regula | 0.449 | 0.371 | 0.412 | 1.3e-15 | |
| UNIPROTKB|F1P0B7 | 224 | CHAC1 "Uncharacterized protein | 0.532 | 0.517 | 0.370 | 4.2e-15 | |
| MGI|MGI:1916315 | 223 | Chac1 "ChaC, cation transport | 0.449 | 0.439 | 0.412 | 4.2e-15 | |
| RGD|1307153 | 222 | Chac1 "ChaC, cation transport | 0.449 | 0.441 | 0.412 | 4.2e-15 | |
| UNIPROTKB|F1SSU9 | 259 | CHAC1 "Uncharacterized protein | 0.449 | 0.378 | 0.403 | 5.4e-15 | |
| MGI|MGI:1915294 | 178 | Chac2 "ChaC, cation transport | 0.527 | 0.646 | 0.386 | 3e-14 | |
| UNIPROTKB|Q8WUX2 | 184 | CHAC2 "Cation transport regula | 0.536 | 0.635 | 0.372 | 7.9e-14 |
| ZFIN|ZDB-GENE-030131-1957 chac1 "ChaC, cation transport regulator-like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 53/133 (39%), Positives = 76/133 (57%)
Query: 32 WGRAFLVSG---KSAVPYLHTREGTLGGYKTSFEQFYPKDHXXXXXXXXXXXXXXXXPIR 88
WG AF V+G + ++ YL+ RE GGY T F+P+ P++
Sbjct: 73 WGVAFEVTGSQMEESLKYLNVREAVRGGYLTRAVDFFPRG-------------TNQPPVQ 119
Query: 89 TMMFIACPTNSMWLGEAPLHEIANQIVSCKGPSGHNAEYVLRLAIFMRENIPDAHVHDPE 148
+++IA P N ++LG A EIA+QI CKG SGHN EY+LRLA FMR + PD V DP
Sbjct: 120 ALVYIATPDNPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFMRVSCPD--VDDPH 177
Query: 149 LFTLEIMIRSRLK 161
LF++E + + ++
Sbjct: 178 LFSIEAALLATIR 190
|
|
| UNIPROTKB|A6H738 CHAC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R9S1 CHAC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9BUX1 CHAC1 "Cation transport regulator-like protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P0B7 CHAC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1916315 Chac1 "ChaC, cation transport regulator 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1307153 Chac1 "ChaC, cation transport regulator homolog 1 (E. coli)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SSU9 CHAC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1915294 Chac2 "ChaC, cation transport regulator 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8WUX2 CHAC2 "Cation transport regulator-like protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 218 | |||
| pfam04752 | 178 | pfam04752, ChaC, ChaC-like protein | 2e-23 |
| >gnl|CDD|218243 pfam04752, ChaC, ChaC-like protein | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-23
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 27 TRSIVWGRAFLVSGKSA---VPYLHTREGTLGGYKTSFEQFYPKDHSDQSSSSEDGLSET 83
WG A+ V G+ A + YL RE GY+T FYP+
Sbjct: 56 EEGRCWGVAYRVPGEEAEEVLEYLDVREKV-NGYETESVPFYPRLDVG------------ 102
Query: 84 SQPI--RTMMFIACPTNSMWLGEAPLHEIANQIVSCKGPSGHNAEYVLRLAIFMRENIPD 141
++P+ R ++++A P N +LG APL EIA QI + GPSG NAEY+ LA +R P+
Sbjct: 103 TEPVVLRALVYVATPKNPQYLGPAPLEEIAAQIATAVGPSGPNAEYLFNLAKHLRALGPE 162
Query: 142 AHVHDPELFTLEIMIR 157
+ D L LE ++R
Sbjct: 163 --IRDDHLEELEELVR 176
|
The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins. Length = 178 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| KOG3182|consensus | 212 | 100.0 | ||
| PF04752 | 178 | ChaC: ChaC-like protein; InterPro: IPR006840 The C | 100.0 | |
| COG3703 | 190 | ChaC Uncharacterized protein involved in cation tr | 100.0 | |
| PHA03014 | 163 | hypothetical protein; Provisional | 99.02 | |
| PF13772 | 83 | AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_ | 98.93 | |
| cd06661 | 99 | GGCT_like GGCT-like domains, also called AIG2-like | 98.63 | |
| KOG4059|consensus | 193 | 97.73 | ||
| PF06094 | 102 | AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i | 97.48 | |
| COG2105 | 120 | Uncharacterized conserved protein [Function unknow | 95.05 |
| >KOG3182|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-48 Score=325.70 Aligned_cols=152 Identities=40% Similarity=0.682 Sum_probs=140.3
Q ss_pred eecccCCC---CCCCCCCeeEEEeeCCCCeEEEEEEEeCCC---ChhhHHHhhccCCCCCcceEEEEEeCCCCCCCCCCC
Q psy10899 4 LLAWSGGN---SSTRTRVRYFGHILSTRSIVWGRAFLVSGK---SAVPYLHTREGTLGGYKTSFEQFYPKDHSDQSSSSE 77 (218)
Q Consensus 4 ~~~wq~s~---~T~e~PGrV~tL~~~~gg~cwGvAYrI~~~---~~l~yLd~RE~~~ggY~~~~v~~~~~~~~~~~~~~~ 77 (218)
+||||++. |||+.||||+||+++.+++|||+||+|+++ ++++||+.|| +|||..+.|+||+.+..
T Consensus 39 RrF~q~s~dHRGtp~~PGRv~TLi~~~e~~~wGvay~V~g~~~~~~l~yl~~RE--~nGY~~~~v~f~~e~~~------- 109 (212)
T KOG3182|consen 39 RRFWQGSTDHRGTPEHPGRVATLIPYEEAITWGVAYRVRGKQASEVLEYLNVRE--LNGYTTHEVEFYPEDAA------- 109 (212)
T ss_pred hheeccccccCCCCCCCceeEEeecCCcceEeeEEEEecchhHHHHHHHHHHHh--hcCcceeeeeeeccCCC-------
Confidence 69999999 699999999999999999999999999996 5899999999 79999999999997543
Q ss_pred CCCCCCCCcEEEEEEEecCCCCCCCCCCCHHHHHHHHHcccCCCCCcHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Q psy10899 78 DGLSETSQPIRTMMFIACPTNSMWLGEAPLHEIANQIVSCKGPSGHNAEYVLRLAIFMRENIPDAHVHDPELFTLEIMIR 157 (218)
Q Consensus 78 ~~~~~~g~~v~AlvYiat~~n~~y~G~~~le~iA~~Ia~a~GpSG~N~EYL~~La~~Lr~~~pg~gi~D~hL~~Le~~Vr 157 (218)
....++.+||||||++|++|+||+++++||+||++|+||||+|+||||+|+++|++++|++ .|+||++|++.||
T Consensus 110 ----~~p~v~~vlvyvaTp~N~~ylGp~ple~iArqI~t~~GpsG~N~eYLf~La~am~~l~p~~--~D~hl~eL~~~Vr 183 (212)
T KOG3182|consen 110 ----ELPEVLGVLVYVATPDNEYYLGPAPLEEIARQIVTARGPSGPNREYLFNLAKAMRQLFPGA--EDEHLFELENEVR 183 (212)
T ss_pred ----CCCceEEEEEEEecCCCccccCCccHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHcCCCc--hhHHHHHHHHHHH
Confidence 2468899999999999999999999999999999999999999999999999999999988 9999999999999
Q ss_pred HHhhhcCCCccccc
Q psy10899 158 SRLKEKKIPLHVIM 171 (218)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (218)
+.+.+.. .+.+.|
T Consensus 184 k~l~~~~-~~~~al 196 (212)
T KOG3182|consen 184 KYLVESR-PLVHAL 196 (212)
T ss_pred HHHhccc-hhhhhh
Confidence 9988665 554444
|
|
| >PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli | Back alignment and domain information |
|---|
| >COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PHA03014 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A | Back alignment and domain information |
|---|
| >cd06661 GGCT_like GGCT-like domains, also called AIG2-like family | Back alignment and domain information |
|---|
| >KOG4059|consensus | Back alignment and domain information |
|---|
| >PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 [] | Back alignment and domain information |
|---|
| >COG2105 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| 3cry_A | 188 | Gamma-glutamyl cyclotransferase; enzyme, oxoprolin | 99.62 | |
| 2qik_A | 285 | UPF0131 protein YKQA; NESG, SR631, structural geno | 99.59 | |
| 2g0q_A | 173 | AT5G39720.1 protein; structural genomics, protein | 98.53 | |
| 2jqv_A | 165 | AT3G28950, AIG2 protein-like; structural genomics, | 98.24 | |
| 3jud_A | 153 | AIG2-like domain-containing protein 1; cyclotransf | 97.53 | |
| 1vkb_A | 161 | Hypothetical protein; gamma-glutamyl cyclotransfer | 97.31 | |
| 1v30_A | 124 | Hypothetical UPF0131 protein PH0828; alpha+beta, s | 94.01 | |
| 1xhs_A | 121 | Hypothetical UPF0131 protein YTFP; structure, auto | 93.7 | |
| 2qik_A | 285 | UPF0131 protein YKQA; NESG, SR631, structural geno | 90.79 |
| >3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-16 Score=129.34 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=103.6
Q ss_pred eecccCCCC-CCCCCCeeEEEeeCCCCeEEEEEEEeCCCChhhHHHhhccCC-CCCcceEEEEEeCCCCCCCCCCCCCCC
Q psy10899 4 LLAWSGGNS-STRTRVRYFGHILSTRSIVWGRAFLVSGKSAVPYLHTREGTL-GGYKTSFEQFYPKDHSDQSSSSEDGLS 81 (218)
Q Consensus 4 ~~~wq~s~~-T~e~PGrV~tL~~~~gg~cwGvAYrI~~~~~l~yLd~RE~~~-ggY~~~~v~~~~~~~~~~~~~~~~~~~ 81 (218)
|.|++.+.+ ++..+|.++|+++++++.|||++|+|++ ..+++||.||+.. |+|.+.+++|.+.
T Consensus 51 l~f~~~~~~~~~~~~g~~~~lv~~~g~~V~G~ly~v~~-~~l~~LD~~Eg~~~g~Y~r~~v~V~~~-------------- 115 (188)
T 3cry_A 51 LDFGNSQGKTSQTWHGGIATIFQSPGDEVWGVVWKMNK-SNLNSLDEQQGVKSGMYVVIEVKVATQ-------------- 115 (188)
T ss_dssp EEEEEETTCCCTTTSSCEEEEEEEEEEEEEEEEEEEEG-GGHHHHHHHTTGGGTSCEEEEEEEEET--------------
T ss_pred EEECCCCCCCcCCCCCeeEeEEeCCCCEEEEEEEEECH-HHHHHHHHHhCCCCCcEEEEEEEEEeC--------------
Confidence 456666554 6677899999999999999999999987 5689999999753 5899999999986
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCCCHHHHHHHHHcccCCCCCcHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Q psy10899 82 ETSQPIRTMMFIACPTNSMWLGEAPLHEIANQIVSCKGPSGHNAEYVLRLAIFMRENIPDAHVHDPELFTLEIMIRS 158 (218)
Q Consensus 82 ~~g~~v~AlvYiat~~n~~y~G~~~le~iA~~Ia~a~GpSG~N~EYL~~La~~Lr~~~pg~gi~D~hL~~Le~~Vr~ 158 (218)
+|..+.|++|++++.++ ..|.++.+.+|+++.+.+|.+.||+.+|...- .. |-.-+.+++|+++++.
T Consensus 116 -~g~~~~a~vYv~~~~~~----~~ps~~Yl~~i~~g~~~~gl~~~y~~~L~~~~-~~----g~~~p~~~~~~~~~~~ 182 (188)
T 3cry_A 116 -EGKEITCRSYLMTNYES----APPSPQYKKIICMGAKENGLPLEYQEKLKAIE-PN----DYTGKVSEEIEDIIKK 182 (188)
T ss_dssp -TCCEEEEEEEECSSEEE----CCCCHHHHHHHHHHHHHTTCCHHHHHHHHTCC-CC----CCCSCCCHHHHHHHHC
T ss_pred -CCCEEEEEEEEecCCCC----CCChHHHHHHHHHHHHHhCcCHHHHHHHhccc-cc----CCCCCCcHHHHHHHHh
Confidence 46789999999998653 45678899999999999999999988876532 22 2255577888877653
|
| >2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A | Back alignment and structure |
|---|
| >1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A | Back alignment and structure |
|---|
| >1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1 | Back alignment and structure |
|---|
| >1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1 | Back alignment and structure |
|---|
| >2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| d1vkba_ | 151 | Hypothetical protein LOC223267 {Mouse (Mus musculu | 97.26 | |
| d1xhsa_ | 113 | Hypothetical protein YtfP {Escherichia coli [TaxId | 92.56 | |
| d1v30a_ | 118 | Hypothetical protein PH0828 {Pyrococcus horikoshii | 86.97 |
| >d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Gamma-glutamyl cyclotransferase-like superfamily: Gamma-glutamyl cyclotransferase-like family: Gamma-glutamyl cyclotransferase-like domain: Hypothetical protein LOC223267 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.26 E-value=0.00021 Score=55.33 Aligned_cols=69 Identities=14% Similarity=0.251 Sum_probs=51.5
Q ss_pred eCCCCeEEEEEEEeCCCChhhHHHhhccCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCcEEEEEEEecCCCCCCC
Q psy10899 25 LSTRSIVWGRAFLVSGKSAVPYLHTREGTLGGYKTSFEQFYPKDHSDQSSSSEDGLSETSQPIRTMMFIACPTNSMWL 102 (218)
Q Consensus 25 ~~~gg~cwGvAYrI~~~~~l~yLd~RE~~~ggY~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~AlvYiat~~n~~y~ 102 (218)
+..+..|+|..|.|++ +.++.||..|...+.|.+..|+|.+.+.. ....++..++|.+|+.....+.++
T Consensus 59 ~~~~~~V~G~l~~v~~-~~l~~LD~~Eg~~~~Y~R~~v~V~l~~~~--------~~~~~g~~v~A~vY~~~~~~~~~~ 127 (151)
T d1vkba_ 59 PGKGHCVTGEIYEVDE-QMLRFLDDFEDCPSMYQRTALQVQVLEWE--------GDGDPGDSVQCFVYTTATYAPEWL 127 (151)
T ss_dssp TTSSBCCEEEEEEECH-HHHHHHHHHTTTTTSCEEEEEEEEEEEEC------------CCSEEEEEEEEESCCCGGGG
T ss_pred CCCCcEEEEEEEEcCH-HHHHhhHHhcCCCCceEEEEEEEEecccc--------ccCCCCCEEEEEEEECCCCChhhh
Confidence 3455689999999986 78999999996557899999999874211 001267899999999987655543
|
| >d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|