Psyllid ID: psy10942

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
Protein Sequence
VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Secondary Structure (PSIPRED)
ccEEEEEEEEEccccccEEEEEcccccEEEEEccccEEEEEEEccccEEEEEEEccccccEEEccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEcccccccccccccccccccEEEEccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEcccccccccEEEEEEcccccEEEEEEcccEEEEEccccccEEEEEcccEEEEccccccccccccEEEEEEEcccccccEEEEEccccEEEEEEccccccEEEEEEccccEEEEEcccccEEEEEcccccccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEccEEEEccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEcEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEEccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccccccccEEEEEEccccEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEcccccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEccccEEEEEEcccccEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEccccccccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEcEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccEccccccEccccccccccEEHHHccccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEccccccHHHHHHHHcccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEcccEEEEcccccEEEEEEccEEEEc
Coil and Loop (DISEMBL)
vkfcvtcfdvipqitsefsvhcgrdkvLFTWDlssrkqlrsypayesleTCAVFHlsdetesksggktfVLAGGEKSLLHYYETSAVKELYqhglssplvRIVRSSVKRMYAVVTADHNIslyrlnsetgleerpnKILKFRKQFVGFSDEILDIAllgeedshIVVASneylnggdlsglvklganrshnewFDKTFERILEAKFKqsssqqkhnterlgrdelktvtllergktvkeedlfprqsmepstlEELEKrktyhfplfgifvpeaehgafytgGTVELLASGSLDKTVKVWSTTGGLKLLNVLrghkkghekdincvtvspndkllasgsldkTVKVWSTTGGLKLLNVLrghkkgtqivsTGADGLLKLWSIKtstcvstfdKHALKIWTLAItkdenqiitggvwfvnfspldrilisssgdaTIKLWCLTDYVclksleghdasvlrchfinkgtqivsTGADGLLKLWSIKTSTCVSTFDKHAlkirnsdsendhkgfglprqlcsrnsdceyrggwspqvvvy
Flexible Loop (DISEMBL)
vkfcvtcfdvipqitsefsvhcgrDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSdetesksggkTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVvtadhnislyrlnsetgleerpnKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKfkqsssqqkhnterlgrdelktvtllergktvkeedlfprqsmepstleeLEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRghkkghekdincvtvspndkllasgsldktvkVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALkirnsdsendhkgfglprqlcsrnsdceyrggwspqvvvy
Low Complexity Region (SEG)
VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Disordered region (IsUnstruct)
**FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLS********GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE********************************************************KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI************************CEYRGGW*******
Disordered Region (DISOPRED)
VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Disordered Region (DISEMBL)
VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKF************RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Disordered Region (DISPRO)
*KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	537	2.2.26 [Sep-21-2011]
Q12788	808	Transducin beta-like prot	yes	N/A	0.303	0.201	0.367	3e-35
Q5U2W5	800	Transducin beta-like prot	yes	N/A	0.348	0.233	0.348	5e-35
Q8C4J7	801	Transducin beta-like prot	yes	N/A	0.348	0.233	0.344	2e-34
Q2KJJ5	800	Transducin beta-like prot	yes	N/A	0.344	0.231	0.361	2e-34
Q05946	817	U3 small nucleolar RNA-as	yes	N/A	0.355	0.233	0.305	3e-27
Q9USN3	777	Probable U3 small nucleol	yes	N/A	0.355	0.245	0.308	1e-24
Q00808	1356	Vegetative incompatibilit	no	N/A	0.381	0.151	0.292	2e-24
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.357	0.125	0.333	6e-24
Q8YV57	1683	Uncharacterized WD repeat	no	N/A	0.376	0.120	0.323	2e-23
Q8YTC2	1258	Uncharacterized WD repeat	no	N/A	0.353	0.151	0.315	5e-23

>sp|Q12788|TBL3_HUMAN Transducin beta-like protein 3 OS=Homo sapiens GN=TBL3 PE=1 SV=2

 Score =  150 bits (378), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 118/223 (52%), Gaps = 60/223 (26%)

Query: 287 LLASGSLDKTVKVWSTTGGL----------KLLNVLRGHKKGHEKDINCVTVSPNDKLLA 336
            L +GS D TVK+W     L           +L   +  ++ H+KDIN V ++PNDKLLA
Sbjct: 436 FLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLA 495

Query: 337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           +GS D+T K+W+     +LL V  GH++                                
Sbjct: 496 TGSQDRTAKLWALPQ-CQLLGVFSGHRR-------------------------------- 522

Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                            G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHDAS
Sbjct: 523 -----------------GLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDAS 565

Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
           VL+  F+++GTQ++S+G+DGL+KLW+IK + CV T D H  K+
Sbjct: 566 VLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKV 608

Homo sapiens (taxid: 9606)

>sp|Q5U2W5|TBL3_RAT Transducin beta-like protein 3 OS=Rattus norvegicus GN=Tbl3 PE=2 SV=1

 Score =  149 bits (377), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 130/261 (49%), Gaps = 74/261 (28%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVL----------RGHKKGHEKDINCVTVSPNDKLLA 336
            L +GS D TVK+W     L   N            +  ++ H+KDIN + VSPNDKLLA
Sbjct: 436 FLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLA 495

Query: 337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           +GS D+T K+W+     +LL V  GH++                                
Sbjct: 496 TGSQDRTAKLWALPQ-CQLLGVFSGHRR-------------------------------- 522

Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                            G+W V FSP D++L ++S D TIKLW L D+ CLK+ EGHDAS
Sbjct: 523 -----------------GLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDAS 565

Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ 516
           VL+  F+++G Q++S+G+DGLLKLW+IK++ CV T D H  K+           +GL   
Sbjct: 566 VLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKV-----------WGLH-- 612

Query: 517 LCSRNSDCEYRGGWSPQVVVY 537
            CSR  D    GG   +++++
Sbjct: 613 -CSRLDDHAITGGSDSRIILW 632

Rattus norvegicus (taxid: 10116)

>sp|Q8C4J7|TBL3_MOUSE Transducin beta-like protein 3 OS=Mus musculus GN=Tbl3 PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 132/261 (50%), Gaps = 74/261 (28%)

Query: 287 LLASGSLDKTVKVWSTTGGL----------KLLNVLRGHKKGHEKDINCVTVSPNDKLLA 336
            L +GS D TVK+W     L           +L   +  ++ H+KDIN + VSPNDKLLA
Sbjct: 436 FLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLA 495

Query: 337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           +GS D+T K+W+     +LL V  GH++                                
Sbjct: 496 TGSQDRTAKLWALPQ-CQLLGVFTGHRR-------------------------------- 522

Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                            G+W V FSP D++L ++S D TIKLW L D+ CLK+ EGHDAS
Sbjct: 523 -----------------GLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDAS 565

Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ 516
           VL+  F+++G+Q++S+G+DGLLKLW+IK++ CV T D H  K+           +GL   
Sbjct: 566 VLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKV-----------WGLH-- 612

Query: 517 LCSRNSDCEYRGGWSPQVVVY 537
            CS+  D    GG   +++++
Sbjct: 613 -CSQLDDHAITGGSDSRIILW 632

Mus musculus (taxid: 10090)

>sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 129/263 (49%), Gaps = 78/263 (29%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG------------HEKDINCVTVSPNDKL 334
            L +GS D TVK+W     L  L+   GH+ G            H+KDIN V V+PNDKL
Sbjct: 436 FLVTGSQDCTVKLWPLPEAL--LSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKL 493

Query: 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394
           LA+GS D+T K                                 LW++     + TF  H
Sbjct: 494 LATGSQDRTAK---------------------------------LWALPRCQLLGTFSGH 520

Query: 395 ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
                              G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHD
Sbjct: 521 -----------------RRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 563

Query: 455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP 514
           ASVL+  F+++GTQ++S+G+DGLLKLW+IK + CV T D H  K+           +GL 
Sbjct: 564 ASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKV-----------WGLH 612

Query: 515 RQLCSRNSDCEYRGGWSPQVVVY 537
              CSR  D    G    +VV++
Sbjct: 613 ---CSRLDDRALTGASDSRVVLW 632

Bos taurus (taxid: 9913)

>sp|Q05946|UTP13_YEAST U3 small nucleolar RNA-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP13 PE=1 SV=1

 Score =  123 bits (309), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 64/255 (25%)

Query: 267 FGIFVPEAEHGAFYTG---------GTVELLASGSLDKTVKVW-----STTGGLKLLNVL 312
           F I+     H A  T          G  E L + S D T+K W     + +  ++++ V 
Sbjct: 424 FDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVS 483

Query: 313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG 372
              +  HEKDIN ++VSPND + A+ S DKT K+W+   G +L   L  HK+        
Sbjct: 484 EYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENG-ELEATLANHKR-------- 534

Query: 373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432
                                                    G+W V+F   D++L +SSG
Sbjct: 535 -----------------------------------------GLWDVSFCQYDKLLATSSG 553

Query: 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
           D T+K+W L  +  +K+LEGH  +V RC FINK  Q++S GADGL+K+W   +  C+ T 
Sbjct: 554 DKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTL 613

Query: 493 DKHALKIRNSDSEND 507
           D H  ++    + ND
Sbjct: 614 DGHNNRLWALSTMND 628

Involved in nucleolar processing of pre-18S ribosomal RNA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=utp13 PE=3 SV=3

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 46/237 (19%)

Query: 288 LASGSLDKTVKVWSTT---GGLKLLNVLRGHKKGHEKDINCVTVSPND-----KLLASGS 339
           LA+G+ D TV++W+        K ++V  GH       +  V + P D       LAS S
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTAS----VTAVALGPLDVNGYPTFLASSS 434

Query: 340 LDKTVK-----------------VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI 382
            D+T+K                 VW+     + +N ++  K G  I S   D  +KLW  
Sbjct: 435 QDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDS 494

Query: 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442
            T   V     H                   GVW  +F+P  R L S SGD TI++W + 
Sbjct: 495 STGEVVGVLRGH-----------------RRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537

Query: 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
              C+++LEGH  ++L+  +I++GTQ+VS  ADGL+K+WS+ +  CV+T D H  ++
Sbjct: 538 TQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRV 594

Involved in nucleolar processing of pre-18S ribosomal RNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 41/246 (16%)

Query: 286  ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            E +ASGS DKT+K+W    G     +     +GH   +  V  SP+ + +ASGS D T+K
Sbjct: 896  ERVASGSDDKTIKIWDAASGTCTQTL-----EGHGGRVQSVAFSPDGQRVASGSDDHTIK 950

Query: 346  VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
            +W    G      L GH            G ++ S   D  +K+W   + TC  T + H 
Sbjct: 951  IWDAASG-TCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHG 1009

Query: 396  LKIWTLAITKDENQIITG-----------------------GVWF--VNFSPLDRILISS 430
              +W++A + D  ++ +G                       G W   V FSP  + + S 
Sbjct: 1010 GSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASG 1069

Query: 431  SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490
            S D TIK+W      C ++LEGH  SV    F   G ++ S   DG +K+W   + TC  
Sbjct: 1070 SDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQ 1129

Query: 491  TFDKHA 496
            T + H 
Sbjct: 1130 TLEGHG 1135

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score =  112 bits (281), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 33/225 (14%)

Query: 287  LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
            +LASGS DKTV++W  +   K L+  +GH       +N V  +P+  +LASGS D+TV++
Sbjct: 1256 MLASGSSDKTVRLWDISSS-KCLHTFQGHTNW----VNSVAFNPDGSMLASGSGDQTVRL 1310

Query: 347  WSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
            W  +   K L+  +GH            GT + S   D  ++LWSI +  C+ TF  H  
Sbjct: 1311 WEISSS-KCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGH-- 1367

Query: 397  KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                           T  V  V FSP   IL S SGD T++LW ++   CL +L+GH+  
Sbjct: 1368 ---------------TNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNW 1412

Query: 457  VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRN 501
            V    F   GT + S   D  ++LW+I +  C+ T   H   +R+
Sbjct: 1413 VGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS 1457

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1

 Score =  110 bits (276), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 45/247 (18%)

Query: 286  ELLASGSLDKTVKVWSTTGGL-KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
            + +ASGSLDKT+K+WS  G L + LN       GHE  +  V+ SP+ + +ASG  DKT+
Sbjct: 1085 QTIASGSLDKTIKLWSRDGRLFRTLN-------GHEDAVYSVSFSPDGQTIASGGSDKTI 1137

Query: 345  KVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394
            K+W T+ G  LL  + GH++          G  + S  +D  +KLW   +   + T   H
Sbjct: 1138 KLWQTSDG-TLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGH 1196

Query: 395  ALKIWTLAITKDENQIITGG------VW----------------FVN---FSPLDRILIS 429
            +  + T+  + D   I  G       +W                +VN   FSP  + L S
Sbjct: 1197 SAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLAS 1256

Query: 430  SSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV 489
            +S D TIKLW + D   +K+L+GH+ SV   +F + G  I S   D  +KLW+ +    +
Sbjct: 1257 ASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN-RHGIEL 1315

Query: 490  STFDKHA 496
             TF  H+
Sbjct: 1316 ETFTGHS 1322

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1

 Score =  109 bits (272), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 35/225 (15%)

Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
           AF+  G  E LAS S DKT+K+W    G  L  +      GH   + CV  SP+   LAS
Sbjct: 733 AFHPDG--ETLASASGDKTIKLWDIQDGTCLQTL-----TGHTDWVRCVAFSPDGNTLAS 785

Query: 338 GSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG----------LLKLWSIKTSTC 387
            + D T+K+W  + G K L  L+ H    + V+  ADG           +K+W+  T  C
Sbjct: 786 SAADHTIKLWDVSQG-KCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGEC 844

Query: 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL 447
           + T+  H                 T  V+ + +SP  +IL+S SGD TIKLW    ++C+
Sbjct: 845 LKTYIGH-----------------TNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICI 887

Query: 448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
           K+L GH   V    F   G  +     D  ++LW+ +T  C+  +
Sbjct: 888 KTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAW 932

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	537
348530856	930	PREDICTED: transducin beta-like protein	0.696	0.402	0.330	8e-56
332030770	799	Transducin beta-like protein 3 [Acromyrm	0.687	0.461	0.298	6e-52
270012271	779	hypothetical protein TcasGA2_TC006390 [T	0.696	0.480	0.322	1e-50
320170777	1038	WD repeat-containing protein SAZD [Capsa	0.702	0.363	0.303	9e-50
328783557	794	PREDICTED: transducin (beta)-like 3 [Api	0.707	0.478	0.294	1e-49
312381615	947	hypothetical protein AND_06033 [Anophele	0.703	0.399	0.304	9e-49
157106462	797	hypothetical protein AaeL_AAEL004526 [Ae	0.685	0.461	0.315	4e-48
297283232	808	PREDICTED: transducin (beta)-like 3 [Mac	0.687	0.456	0.300	6e-48
380028818	797	PREDICTED: LOW QUALITY PROTEIN: transduc	0.709	0.478	0.292	5e-47
307179625	810	WD repeat-containing protein SAZD [Campo	0.690	0.458	0.291	2e-46

>gi|348530856|ref|XP_003452926.1| PREDICTED: transducin beta-like protein 3-like [Oreochromis niloticus]

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 170/515 (33%), Positives = 234/515 (45%), Gaps = 141/515 (27%)

Query: 20  VHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLS-DETE--SKSGGKTFVLAGGEK 76
           V  GRDK+   WDL +RK  R+ P YE++E   +   S D TE   KS    F+ AG  K
Sbjct: 208 VSSGRDKICTVWDLKTRKAKRTVPVYEAVEGVVILPGSTDLTEIGVKSKDLHFITAGS-K 266

Query: 77  SLLHYYETSAVKELYQHGLSS---------------PLVRIVRSSVKRMYAVVTADHNIS 121
            +L  +E S  + +Y   L S                L  +         A VTA+HNI 
Sbjct: 267 GVLRVWEASTARCVYTQTLPSTLPSASEEDENDNPRSLTYLFHLPASARLATVTAEHNIL 326

Query: 122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGL 181
           LY+L +           L  ++QFVG+SDE+LD+  LG+ DSHIVVA+            
Sbjct: 327 LYQLPA-----------LTTQQQFVGYSDEVLDVKFLGKGDSHIVVAT------------ 363

Query: 182 VKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED 241
                    N    K FE +  +                         L     TV   D
Sbjct: 364 ---------NSCQLKVFELLTNS----------------------CQILYGHTDTVLTLD 392

Query: 242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGT---------VELLASGS 292
           +F + S+  S  ++   R  +H       V     G+ +T               +A+GS
Sbjct: 393 VFKKGSLFASCAKDRSVR-VWHMDSDSGQVRCVAQGSGHTNAVGSIACSRMKASFVATGS 451

Query: 293 LDKTVKVW------STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
            D TVKVW      S  GG++ L   R  +K H+KD+N V VSPNDKLLASGS D+T K+
Sbjct: 452 QDCTVKVWDLPADCSAEGGIRQLTA-RATEKAHDKDVNSVAVSPNDKLLASGSQDRTAKL 510

Query: 347 WSTTG--GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
           WS TG   + LL V RGH++                                        
Sbjct: 511 WSLTGEGTVGLLGVFRGHRR---------------------------------------- 530

Query: 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
                    GVW V FSP+D++L ++S D T KLW L D+ CLK+ EGHDASVL+  F++
Sbjct: 531 ---------GVWAVCFSPVDQVLATTSADGTAKLWSLQDFSCLKTFEGHDASVLKVIFVS 581

Query: 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
           +GTQ++++G+DGL+KLW+IKT+ CV T D H  K+
Sbjct: 582 RGTQLLTSGSDGLVKLWTIKTNECVKTLDAHQDKV 616

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332030770|gb|EGI70446.1| Transducin beta-like protein 3 [Acromyrmex echinatior]

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 237/510 (46%), Gaps = 141/510 (27%)

Query: 18  FSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDE-----TESKSGGKTFVLA 72
           + V  GRD+VL  WD+S+   +R  P YE +E    F +S +      +S+  G  +V +
Sbjct: 208 YLVSSGRDRVLILWDISTGTSIRVLPVYEGIE--GTFMISAKCLPVFIKSRKSGGIYVAS 265

Query: 73  GGEKSLLHYYETSAVKELY------------QHGLSSPLVRIVRSSVKRMYAVVTADHNI 120
            GEK ++  +E    K++Y            + GLS  +  ++ +S+  ++AVV+ DHNI
Sbjct: 266 AGEKGVVKIWEMKTGKQIYVQDDSLVPPSKEEGGLS--ITHLLYNSISNIFAVVSVDHNI 323

Query: 121 SLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSG 180
            ++ +           ++ + +KQ VG+SDEILD+A LG+ DSHI +A+N          
Sbjct: 324 IVHSM-----------ELFECKKQLVGYSDEILDVAYLGDNDSHIALATNS--------- 363

Query: 181 LVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE 240
                                 + K  + +S    N + L      T ++L    T+   
Sbjct: 364 ---------------------CDIKLYEIASM---NCQLLCG---HTDSILALATTLANV 396

Query: 241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL------- 293
           +L    + + S    L  + T      G       H   +T     +  S +L       
Sbjct: 397 NLLLSSAKDNSVRVWLLDKDTMRMSCIG-------HAIRHTASISSIAISQTLPKFFTTV 449

Query: 294 --DKTVKVWSTTGGLKL------LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
             D  +K+W     L+       LNV R     H+KDINCVT+SPNDKL+A+ S DKT K
Sbjct: 450 AQDSCLKLWELPNNLESHNQDLSLNV-RHTTLAHQKDINCVTISPNDKLIATASQDKTAK 508

Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
           +W     L+LL VL GH++                                         
Sbjct: 509 LWYAEN-LQLLGVLHGHRRS---------------------------------------- 527

Query: 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK 465
                    VW V FSP+D++L+++S D T+KLW LT+  CLK+ EGH++SVLR  F+++
Sbjct: 528 ---------VWCVRFSPIDQVLLTTSADCTMKLWSLTELNCLKTFEGHESSVLRGEFLSR 578

Query: 466 GTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           G Q++++G DGLLKLW+IKTS C+ST ++H
Sbjct: 579 GMQLITSGGDGLLKLWNIKTSECISTLNQH 608

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012271|gb|EFA08719.1| hypothetical protein TcasGA2_TC006390 [Tribolium castaneum]

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 166/515 (32%), Positives = 237/515 (46%), Gaps = 141/515 (27%)

Query: 20  VHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAV----FHLSDETESKSGGKTFVLAGGE 75
           V  GRDKV+  W  +  K LR+ P YE++E        F L D          +V +GGE
Sbjct: 201 VTSGRDKVIILWKFNQIKALRTIPLYEAVEVIVKLPEKFKLPDFKSDPDC--VYVASGGE 258

Query: 76  KSLLHYYETSAVKELY--QHGLSS-------PLVRIVRSSVKRMYAVVTADHNISLYRLN 126
             L+  ++ +  KE+Y  Q+ L S        + +++     +  AV+TADHNI L+ L 
Sbjct: 259 NGLVRVWDVTNSKEIYKQQNSLVSKAQDGGLAITKLLLGDEDKTLAVITADHNIILHILK 318

Query: 127 SETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGA 186
           S   L           KQF+GFSDEILDI  +G+ DSH+ VA+N        S  +KL  
Sbjct: 319 SFVCL-----------KQFIGFSDEILDICFVGKSDSHLAVATN--------SCDIKLYD 359

Query: 187 NRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ 246
           N   N    K    I+      ++S+   N             +L  GK           
Sbjct: 360 NSDMNCQLLKGHSDIV---LTLATSRANPNL------------MLSGGK----------- 393

Query: 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV------ELLASGSLDKTVK 298
                        K   + L G  +     G  +TG  G+V      + + S S D  +K
Sbjct: 394 -----------DNKICLWSLDGAIMSCVGTGLRHTGSVGSVTFSNINDFMVSVSQDTCLK 442

Query: 299 VWST----TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK 354
           VW      T G  +LN  +  +  H+KDINCV+VSPNDK++A+ S DKT K+W  T  L 
Sbjct: 443 VWEVPKKPTSG-TILNCTK-TEIAHQKDINCVSVSPNDKIIATASQDKTAKLW--TDSLT 498

Query: 355 LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414
            +  L+GHK+                                                 G
Sbjct: 499 FVGTLKGHKR-------------------------------------------------G 509

Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474
           VW V FSP+D+++++SS D  IKLW + D  CLK+LEGHD+SVL+  F++ G QI+S GA
Sbjct: 510 VWSVKFSPVDQVVVTSSADCMIKLWSVADLNCLKTLEGHDSSVLKAEFLSNGMQILSAGA 569

Query: 475 DGLLKLWSIKTSTCVSTFDKH-----ALKIRNSDS 504
           DGLLKL+S+K+S CV TF++H     A+ +R  +S
Sbjct: 570 DGLLKLFSVKSSECVGTFEQHEGRIWAMAVRKDES 604

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|320170777|gb|EFW47676.1| WD repeat-containing protein SAZD [Capsaspora owczarzaki ATCC 30864]

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 226/504 (44%), Gaps = 127/504 (25%)

Query: 22  CGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHL---------------SDETESKSGG 66
            GRDK++  WDL SR   R+   +ESLE   +                    +  S + G
Sbjct: 247 AGRDKIVAMWDLKSRTLARTITTFESLEAIMLVQRRAIAEPESQRSRSRPQQQQPSTTAG 306

Query: 67  KTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIV---RSSVKRMYAVVTADHNISLY 123
             FV AG +  ++  ++ S  K ++   L  P   IV    S       VVT D NI  +
Sbjct: 307 PVFVTAGAD-GVVRMWDLSTGKPVHSRKLDGPKREIVDAFASPATSSIFVVTDDQNI--F 363

Query: 124 RLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGGDLSGLV 182
           +L+  T         L+ +KQ VG +DEI+D+  +G++DSH+V+A+N E L   DL+   
Sbjct: 364 QLDDTT---------LEVKKQIVGQNDEIIDLRFIGDDDSHVVMATNSEQLRTFDLA--- 411

Query: 183 KLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDL 242
             GA                                RL       V  L+    V  + L
Sbjct: 412 TFGA--------------------------------RLLYGHTDIVLCLD----VSNDGL 435

Query: 243 FPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVW 300
               + + +T+   +     +F   G+ +   EA      +  T     +GS D+T+K+W
Sbjct: 436 LLVSAGKDNTVRAWQSEDRLNFDCIGVGIGHTEAIGSVALSRKTRNFAVTGSQDRTIKLW 495

Query: 301 STTGGL-----KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL 355
              G +           R  +K H+KDIN + +SPNDKL+A+GS DKT K+WS+   L L
Sbjct: 496 DLLGAIHNGSETSRMQARMTQKAHDKDINTIAISPNDKLIATGSQDKTAKLWSSED-LSL 554

Query: 356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415
           + VLRGH++                                                 G+
Sbjct: 555 VGVLRGHRR-------------------------------------------------GI 565

Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD 475
           W V FSP+D+ + +SSGD TIKLW L+D  CLK+ EGH  SVL+  FI +G Q+VS G+D
Sbjct: 566 WSVQFSPVDQCIATSSGDKTIKLWALSDLSCLKTFEGHSNSVLKIAFITRGLQLVSCGSD 625

Query: 476 GLLKLWSIKTSTCVSTFDKHALKI 499
           GL+KLW+I+T+ CV+T D H  K+
Sbjct: 626 GLVKLWTIRTNECVATMDGHEEKV 649

Source: Capsaspora owczarzaki ATCC 30864

Species: Capsaspora owczarzaki

Genus: Capsaspora

Class: Ichthyosporea

Superkingdom: Eukaryota

>gi|328783557|ref|XP_001120493.2| PREDICTED: transducin (beta)-like 3 [Apis mellifera]

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 235/506 (46%), Gaps = 126/506 (24%)

Query: 17  EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVF--HLSDETESKSGGKTFVLAGG 74
           ++ +  GRD+VL  WDL+S   +R  P YE +E   +   +LS    +K      +   G
Sbjct: 206 DYLISSGRDRVLILWDLTSGSSIRVVPVYEEIEDTFIISKNLSLPFYNKDENAIHIATAG 265

Query: 75  EKSLLHYYETSAVKELY--QHGLSSP--------LVRIVRSSVKRMYAVVTADHNISLYR 124
           EK ++  +E    KE+Y  ++ + S         +  ++ + +   +AVVT DHNI ++ 
Sbjct: 266 EKGIVKIWEMKTGKEVYVQKNSIVSAAKETETLSITHLLYNDISNNFAVVTVDHNIIIHS 325

Query: 125 LNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKL 184
           L +            +  KQ +G+SDEILDI  LG+ +SHI +A+N        S  +KL
Sbjct: 326 LET-----------FECIKQLIGYSDEILDIVFLGDNESHIAIATN--------SCDIKL 366

Query: 185 GANRSHN-EWFDKTFERILEAKFKQSS-----SQQKHNTERLGRDELKTVTLLERGKTVK 238
            +  + N E      + +L      ++     S  K N+ R+                  
Sbjct: 367 YSTLTMNCELLRGHIDIVLSLATTPANVYLLISAAKDNSIRVW----------------- 409

Query: 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVK 298
              L  +Q+ + S +    +      P+  I + +     F          S S D  +K
Sbjct: 410 ---LMDKQTNKISCIASAIRHTA---PIGSIAISQTSFKFF---------VSVSQDLCLK 454

Query: 299 VWSTTGGLKL-----LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL 353
           +W+    ++      LNV+      H+KDIN VT+SPNDKL+A+GS DKT K+WS    L
Sbjct: 455 LWNLQNDIEFKGICSLNVIHT-TLAHQKDINSVTISPNDKLIATGSQDKTAKLWS--ADL 511

Query: 354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413
           +LL V RGH++                                                 
Sbjct: 512 QLLGVFRGHRR------------------------------------------------- 522

Query: 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG 473
           GVW V FSP+D++L+++S D TIKLW LT+  CLK+LEGH++SVL+  F+++G QI++  
Sbjct: 523 GVWCVRFSPIDQVLLTASADCTIKLWSLTELHCLKTLEGHESSVLKAEFLSRGMQIITAS 582

Query: 474 ADGLLKLWSIKTSTCVSTFDKHALKI 499
            DGLLKLW+IKTS C    ++H  ++
Sbjct: 583 GDGLLKLWNIKTSECTCILEQHESRV 608

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312381615|gb|EFR27324.1| hypothetical protein AND_06033 [Anopheles darlingi]

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 225/509 (44%), Gaps = 131/509 (25%)

Query: 18  FSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDET---ESKSGGKTFVLAGG 74
           F V  GRDK+L  W+  +++ +++ P YE+LET  V          +  S    +   GG
Sbjct: 211 FLVSSGRDKILILWNYETQEAIKTIPVYEALETVTVLPAGVTVGGCKLSSDNGVYAACGG 270

Query: 75  EKSLLHYYETSAVKELYQH------------GLSSPLVRIVRSSVKRMYAVVTADHNISL 122
           E+ ++  +E +  K +Y+             GLS  +  ++ S+     A+V+ADHN+ +
Sbjct: 271 EEGIIKVWEMTEAKIVYKQSNSLVTRATEEGGLS--ITHLIYSNTLGQMAIVSADHNLLV 328

Query: 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV 182
           +   S            +  +Q  GFSDEILDI LLG+ D         YL     S   
Sbjct: 329 HDCAS-----------FECVRQLAGFSDEILDIVLLGKND--------RYLAMATNSYDF 369

Query: 183 KLGANRSHNEWFDKTFERI---LEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE 239
           K+    + N    K    I   L A  +   S  K N+ RL + +               
Sbjct: 370 KIYDTTTMNCQLVKGHTDIVLSLSANQRYLVSSSKDNSIRLWQFD--------------- 414

Query: 240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299
                            E+  T      G+    A      +G +    AS S D+ +K 
Sbjct: 415 -----------------EEHFTIKCLAVGLKHTSAVGSVAISGSSAPFCASVSQDRCLKT 457

Query: 300 W---------STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT 350
           W         + T  L  L      +  HEKDINCV ++PND+LLA+GS DKT K+W  +
Sbjct: 458 WKIPKRFEQGTDTEELPRLQC-NLTQLAHEKDINCVCIAPNDRLLATGSQDKTAKLWDVS 516

Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
             L ++ VLRGH++                                              
Sbjct: 517 D-LSVVGVLRGHRR---------------------------------------------- 529

Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
              G+W V FSP+D+IL++++ D +IKLW LTD  CLK+LEGHD+SVLR  FI+ G Q++
Sbjct: 530 ---GIWAVRFSPVDQILLTNAADCSIKLWSLTDMSCLKTLEGHDSSVLRVEFISGGMQLL 586

Query: 471 STGADGLLKLWSIKTSTCVSTFDKHALKI 499
           S GADGLLKLWSIK+S C+ T DKH  +I
Sbjct: 587 SAGADGLLKLWSIKSSECLETMDKHESRI 615

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106462|ref|XP_001649334.1| hypothetical protein AaeL_AAEL004526 [Aedes aegypti] gi|108879854|gb|EAT44079.1| AAEL004526-PA [Aedes aegypti]

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 236/520 (45%), Gaps = 152/520 (29%)

Query: 17  EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVF----HLSDETESKSGGKTFVLA 72
           +F V  GRDK+L  W+  +++ +++ P YESLE+  V     HL    + KS  K +   
Sbjct: 201 KFLVSSGRDKILIMWNYETQQAVKTIPVYESLESVIVLPKGVHLPG-LKLKSD-KVYAAC 258

Query: 73  GGEKSLLHYYETSAVKELYQH------------GLSSPLVRIVRSSVKRMYAVVTADHNI 120
            GE+ L+  +E +  K +++             GL+   +   + S K   A+V+ADHNI
Sbjct: 259 AGEEGLIKVWEMTETKIVFKQKNSLVTKSAEEGGLAITDLLFNKQSSK--LAIVSADHNI 316

Query: 121 SLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA--SNEY------ 172
            ++ L +            +  KQ  GFSDEILD+ L G++D  + +A  SN++      
Sbjct: 317 IIHDLET-----------FECSKQLSGFSDEILDLILFGKKDHFLGMATNSNDFKIYDTT 365

Query: 173 -----LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKT 227
                L  G    ++ L AN+++          IL        S  K N+ RL R +   
Sbjct: 366 NMNCQLVKGHTDIVLSLSANQNY----------IL--------SSSKDNSIRLWRYDTAK 407

Query: 228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVEL 287
            T+      +K                        H    G        G F        
Sbjct: 408 FTVQCVAIGLK------------------------HTNAVGSIAISKVSGKF-------- 435

Query: 288 LASGSLDKTVKVW------STTGGLKLLNVLRGH--KKGHEKDINCVTVSPNDKLLASGS 339
            AS S DK +KVW      + T   K L  L     +  HEKDINCV +SPND+L+A+GS
Sbjct: 436 CASVSQDKCLKVWKIPKEFNETTDEKELTRLNCTLTELAHEKDINCVCISPNDRLIATGS 495

Query: 340 LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399
            DKT K+W  +  L L+ V RGH++                                   
Sbjct: 496 QDKTAKLWDASN-LSLVGVFRGHRR----------------------------------- 519

Query: 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR 459
                         G+W V FSP+D+IL++++ D +IKLW LTD  CLKSLEGH++SVLR
Sbjct: 520 --------------GIWAVRFSPVDQILLTNAADCSIKLWSLTDMTCLKSLEGHESSVLR 565

Query: 460 CHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             F++ G Q++S GADGLLKLWSIKTS C+ T DKH  +I
Sbjct: 566 VEFLSHGMQLLSAGADGLLKLWSIKTSECLQTLDKHESRI 605

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|297283232|ref|XP_001082569.2| PREDICTED: transducin (beta)-like 3 [Macaca mulatta]

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 236/503 (46%), Gaps = 134/503 (26%)

Query: 23  GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKT---FVLAGGEKSLL 79
           GRDK+   WDL S +  ++ P +ES+E  A   L +E  S+ G K+   + L  G++ +L
Sbjct: 214 GRDKICVIWDLQSCQATKTVPVFESVE--AAVLLPEEPVSQLGVKSSGLYFLTAGDQGIL 271

Query: 80  HYYETSAVKELY-QHGLSSPLVRIVRSSVKRMYAVV---TADHNISLYRLNSETGLEERP 135
             +E ++ + +Y Q     P   +   ++ R   ++   TADHN+ LY   S        
Sbjct: 272 RVWEAASGQCVYTQARPPGPGRELTHCTLARTAGLLLSATADHNLLLYEARS-------- 323

Query: 136 NKILKFRKQFVGFSDEILDIALLGEEDSH-IVVASNEYLNGGDLSGLVKLGANRSHNEWF 194
              L+ +KQF G+S+E+LD+  LG EDSH IV +++  L                     
Sbjct: 324 ---LRLQKQFAGYSEEVLDVRFLGPEDSHVIVASNSPCL--------------------- 359

Query: 195 DKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254
            K FE       + S+ Q  H     G  ++           V   D+F +  +  S  +
Sbjct: 360 -KVFE------LQTSACQILH-----GHTDI-----------VLALDVFRKGWLFASCAK 396

Query: 255 ELEKRKTYHFPLFGIFVPEAE-HGAFYTGGTV-------ELLASGSLDKTVKVWSTTGGL 306
           + +  + +     G  +  A+  G  ++ GTV         L +GS D TVK+W     L
Sbjct: 397 D-QSVRIWRMNKAGQVICVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKAL 455

Query: 307 ----------KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL 356
                      +L   +  ++ H+KDIN V ++PNDKLLA+GS D+T K+W+     +LL
Sbjct: 456 LSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQ-CQLL 514

Query: 357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416
            V  GH++                                                 G+W
Sbjct: 515 GVFSGHRR-------------------------------------------------GLW 525

Query: 417 FVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476
            V FSP+D++L ++S D TIKLW L D+ CLK+ EGHDASVL+  F+++GTQ++S+G+DG
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDG 585

Query: 477 LLKLWSIKTSTCVSTFDKHALKI 499
           L+KLW+IK + CV T D H  K+
Sbjct: 586 LVKLWTIKNNECVRTLDAHEDKV 608

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380028818|ref|XP_003698083.1| PREDICTED: LOW QUALITY PROTEIN: transducin beta-like protein 3-like [Apis florea]

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 226/510 (44%), Gaps = 129/510 (25%)

Query: 17  EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAV----FHLSDETESKSGGKTFVLA 72
           ++ +  GRD+VL  WDL+S    R  P YE +E   +      LS    +K      +  
Sbjct: 204 DYLISSGRDRVLILWDLTSGSSKRVIPVYEEIEDTFIIPKNLSLSLPFYNKDENAIHIAT 263

Query: 73  GGEKSLLHYYETSAVKELY--QHGLSSP--------LVRIVRSSVKRMYAVVTADHNISL 122
            GEK ++  +E    KE+Y  ++ + S         +  ++ + +   +AVVT DHNI +
Sbjct: 264 AGEKGIVKIWEMKTGKEVYVQKNSIVSAAKETETLSITHLLYNDISNNFAVVTVDHNIII 323

Query: 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV 182
           + L +            +  KQ +G+SDEILDI  LG+ +SHI +A+    N  D+    
Sbjct: 324 HSLET-----------FECIKQLIGYSDEILDIVFLGDNESHIAIAT----NSCDIKLYN 368

Query: 183 KLGAN----RSHNEWFDKTFE-RILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTV 237
            L  N    R H    D         A      S  K N+ R+                 
Sbjct: 369 TLTMNCELLRGH---IDIVLSLATTHANVYLLISAAKDNSIRVW---------------- 409

Query: 238 KEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV 297
               L  +Q+ + S +    +             P      F T  + +   S S D  +
Sbjct: 410 ----LMDKQTNKVSCIASATRHTA----------PIGSIAIFQT--SFKFFVSVSQDLCL 453

Query: 298 KVWSTTGGLKL--------LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349
           K+W+    ++         LNV+      H+KDIN VT+SPNDKL+A+GS DKT K+WS 
Sbjct: 454 KLWNLQNDIEFKGKHNVCSLNVIHT-TLAHQKDINSVTISPNDKLIATGSQDKTAKLWS- 511

Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
              L+LL V RGH++                                             
Sbjct: 512 -DDLQLLGVFRGHRR--------------------------------------------- 525

Query: 410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI 469
               GVW V FSP+D++L+++S D TIKLW LT+  CLK+ EGH++SVL+  F+++G QI
Sbjct: 526 ----GVWCVRFSPIDQVLLTTSADCTIKLWSLTELHCLKTFEGHESSVLKAEFLSRGMQI 581

Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
           ++   DGLLKLW+IKTS C    ++H  ++
Sbjct: 582 ITASGDGLLKLWNIKTSECTCILEQHESRV 611

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307179625|gb|EFN67898.1| WD repeat-containing protein SAZD [Camponotus floridanus]

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 235/508 (46%), Gaps = 137/508 (26%)

Query: 18  FSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVF---HLSDETESKSGGKTFVLAGG 74
           + V  GRD+VL  WD+SS   +R  P YE +E   +     L    +       ++ +GG
Sbjct: 219 YLVSSGRDRVLILWDISSGTSIRILPVYEGIEGAFIIPFKSLPAFIKLHRKDDIYIASGG 278

Query: 75  EKSLLHYYETSAVKELY--QHGLSSP--------LVRIVRSSVKRMYAVVTADHNISLYR 124
           EK ++  +E  + K +Y   + L SP        +  ++ ++V +++AVV+ DHNI ++ 
Sbjct: 279 EKGVVKIWEMKSGKLIYTQDNSLVSPAKEEGSLSITHLLYNNVHKIFAVVSVDHNIIIHS 338

Query: 125 LNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKL 184
           L           ++ + +KQ VG+SDEILD+A +                          
Sbjct: 339 L-----------ELFECKKQLVGYSDEILDVAYV-------------------------- 361

Query: 185 GANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERL-GRDELKTVTLLERGKTVKEEDLF 243
           GAN SH      +     + KF   +S    N + L G  +    ++L    T    +L 
Sbjct: 362 GANDSHIALATNS----CDIKFYDIASM---NCQLLCGHSD----SVLALATTPANVNLL 410

Query: 244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASG-----SLDKTVK 298
              + + S    L  ++T      G  +    H A  +   +  +++      + D  +K
Sbjct: 411 ISSAKDNSVRVWLFDKETTRMSCIGHAI---RHTASISSVAISQISTTFFTTVAQDSCLK 467

Query: 299 VWSTTGGLKLLNVLRGHKK-----------GHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
           +W      +L N L  HK+            H+K++NCVT+SPNDKL+A+ S DKTVK+W
Sbjct: 468 LW------ELSNNLESHKQDLSLNISHTILAHQKEMNCVTISPNDKLIATASQDKTVKLW 521

Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407
           S    L+LL V  GH+K                                           
Sbjct: 522 SAED-LQLLGVFHGHRK------------------------------------------- 537

Query: 408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT 467
                 GVW V FSP+D++L+++S D T+KLW LT+  CLK+ EGH++SVL+  F++ G 
Sbjct: 538 ------GVWCVRFSPVDQVLLTTSADCTMKLWSLTELNCLKTFEGHESSVLKGEFLSHGM 591

Query: 468 QIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           Q++++G DGLLKLW+IKTS C+ST D+H
Sbjct: 592 QLITSGGDGLLKLWNIKTSECISTLDQH 619

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	537
UNIPROTKB|F1MNS4	800	TBL3 "Transducin beta-like pro	0.385	0.258	0.368	1.6e-45
UNIPROTKB|Q2KJJ5	800	TBL3 "Transducin beta-like pro	0.385	0.258	0.368	2.7e-45
UNIPROTKB|Q12788	808	TBL3 "Transducin beta-like pro	0.389	0.258	0.354	5.6e-44
MGI|MGI:2384863	801	Tbl3 "transducin (beta)-like 3	0.385	0.258	0.355	1.3e-43
RGD|1305142	800	Tbl3 "transducin (beta)-like 3	0.389	0.261	0.358	3.1e-43
UNIPROTKB|F1NM37	812	TBL3 "Uncharacterized protein"	0.391	0.258	0.363	1.7e-42
UNIPROTKB|F1Q065	803	TBL3 "Uncharacterized protein"	0.385	0.257	0.352	6.2e-42
UNIPROTKB|J3KNP2	697	TBL3 "Transducin beta-like pro	0.309	0.238	0.378	7e-40
ZFIN|ZDB-GENE-041114-104	898	tbl3 "transducin (beta)-like 3	0.372	0.222	0.378	1.6e-39
TAIR|locus:2148965	876	TOZ "AT5G16750" [Arabidopsis t	0.374	0.229	0.371	1.1e-32

UNIPROTKB|F1MNS4 TBL3 "Transducin beta-like protein 3" [Bos taurus (taxid:9913)]

 Score = 337 (123.7 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
 Identities = 83/225 (36%), Positives = 122/225 (54%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D++++VW      ++  V +G   GH   +  +  S   +  L +GS D TVK
Sbjct:   390 LFASCAKDQSIRVWRMNKSGEVACVAQG--SGHTHSVGTICCSRLKETFLVTGSQDCTVK 447

Query:   346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK--------HALK 397
             +W     L  L+   GH+ G   +   A        I  S  V+  DK           K
Sbjct:   448 LWPLPEAL--LSKGTGHEGGPVFLQAQATQRCHDKDIN-SVAVAPNDKLLATGSQDRTAK 504

Query:   398 IWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
             +W L   +      +G   G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHD
Sbjct:   505 LWALPRCQLLGTF-SGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 563

Query:   455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             ASVL+  F+++GTQ++S+G+DGLLKLW+IK + CV T D H  K+
Sbjct:   564 ASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKV 608

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|Q2KJJ5 TBL3 "Transducin beta-like protein 3" [Bos taurus (taxid:9913)]

 Score = 336 (123.3 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
 Identities = 83/225 (36%), Positives = 122/225 (54%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D++++VW      ++  V +G   GH   +  +  S   +  L +GS D TVK
Sbjct:   390 LFASCAKDQSIRVWRMNKSGEVACVAQG--SGHTHSVGTICCSRLKETFLVTGSQDCTVK 447

Query:   346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK--------HALK 397
             +W     L  L+   GH+ G   +   A        I  S  V+  DK           K
Sbjct:   448 LWPLPEAL--LSKGTGHEGGPVFLQAQATQHCHDKDIN-SVAVAPNDKLLATGSQDRTAK 504

Query:   398 IWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
             +W L   +      +G   G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHD
Sbjct:   505 LWALPRCQLLGTF-SGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 563

Query:   455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             ASVL+  F+++GTQ++S+G+DGLLKLW+IK + CV T D H  K+
Sbjct:   564 ASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKV 608

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|Q12788 TBL3 "Transducin beta-like protein 3" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
 Identities = 79/223 (35%), Positives = 122/223 (54%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D++V++W      +++ V +G   GH   +  V  S   +  L +GS D TVK
Sbjct:   390 LFASCAKDQSVRIWRMNKAGQVMCVAQG--SGHTHSVGTVCCSRLKESFLVTGSQDCTVK 447

Query:   346 VWSTTGGLKLLNVLRGHKK---GTQIVSTGADGLLKLWSIKTST---CVSTFDKHALKIW 399
             +W     L   N    +       Q      D  +   +I  +       + D+ A K+W
Sbjct:   448 LWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTA-KLW 506

Query:   400 TLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
              L   +    + +G   G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHDAS
Sbjct:   507 ALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDAS 565

Query:   457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             VL+  F+++GTQ++S+G+DGL+KLW+IK + CV T D H  K+
Sbjct:   566 VLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKV 608

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0005057 "receptor signaling protein activity" evidence=TAS

GO:0007199 "G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:2384863 Tbl3 "transducin (beta)-like 3" [Mus musculus (taxid:10090)]

 Score = 322 (118.4 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
 Identities = 80/225 (35%), Positives = 119/225 (52%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D+++++W      ++  V +G   GH   +  +  S   +  L +GS D TVK
Sbjct:   390 LFASCAKDQSIRIWKMNKAGQVACVAQG--SGHTHSVGTICCSRLKESFLVTGSQDCTVK 447

Query:   346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK--------HALK 397
             +W     L  L        G  ++            I  S  VS  DK           K
Sbjct:   448 LWPLPEAL--LAKSTAADSGPVLLQAQTTRRCHDKDIN-SLAVSPNDKLLATGSQDRTAK 504

Query:   398 IWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
             +W L   +    + TG   G+W V FSP D++L ++S D TIKLW L D+ CLK+ EGHD
Sbjct:   505 LWALPQCQLLG-VFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHD 563

Query:   455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             ASVL+  F+++G+Q++S+G+DGLLKLW+IK++ CV T D H  K+
Sbjct:   564 ASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKV 608

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0032040 "small-subunit processome" evidence=IEA

RGD|1305142 Tbl3 "transducin (beta)-like 3" [Rattus norvegicus (taxid:10116)]

 Score = 325 (119.5 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
 Identities = 80/223 (35%), Positives = 121/223 (54%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D+++++W      ++  V +G   GH   +  +  S   +  L +GS D TVK
Sbjct:   390 LFASCAKDQSIRIWRMNKAGQVACVAQG--SGHTHSVGTICCSRLKESFLVTGSQDCTVK 447

Query:   346 VWSTTGGLKLLNVLR-GHKKGTQIVSTGADGLLKLWSIKTST-----CVSTFDKHALKIW 399
             +W     L   N    G     Q  ST       + S+  S         + D+ A K+W
Sbjct:   448 LWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTA-KLW 506

Query:   400 TLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
              L   +    + +G   G+W V FSP D++L ++S D TIKLW L D+ CLK+ EGHDAS
Sbjct:   507 ALPQCQLLG-VFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDAS 565

Query:   457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             VL+  F+++G Q++S+G+DGLLKLW+IK++ CV T D H  K+
Sbjct:   566 VLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKV 608

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

UNIPROTKB|F1NM37 TBL3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 340 (124.7 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
 Identities = 81/223 (36%), Positives = 124/223 (55%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             +  S + DK+++VW      +++ V +G   GH   +  V+ S   +  + + S D T+K
Sbjct:   400 MFVSCAKDKSIRVWRMNKDGRVVCVAQG--LGHAHGVGAVSCSRLKESFVVTSSQDCTIK 457

Query:   346 VW----STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST-CVSTFDKHAL-KIW 399
             VW    S T   K   +        Q+   G D  +   ++  +   ++T  +  L K+W
Sbjct:   458 VWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLW 517

Query:   400 TLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
             +         + TG   G+W V FSP+D+IL +SS D T+KLW L D+ CLK+ EGHDAS
Sbjct:   518 SCPDCSLLG-VFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDAS 576

Query:   457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             VL+  F+++GTQ++S G+DGLLKLW+IKT+ CV T D H  KI
Sbjct:   577 VLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKI 619

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|F1Q065 TBL3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
 Identities = 80/227 (35%), Positives = 120/227 (52%)

Query:   287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVK 345
             L AS + D+++ +W      ++  V +G   GH   +  +  S   +  L +GS D TVK
Sbjct:   387 LFASCAKDQSICIWRMNKAGRVACVAQG--SGHTHSVGTICCSRLKETFLVTGSQDCTVK 444

Query:   346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK--------HALK 397
             +W     L  L+       G  ++   A        I  S  V+  DK           K
Sbjct:   445 LWPIPEAL--LSKGTAPDSGPILLQAQATQRCHDKDIN-SVAVAPNDKLLATGSQDRTAK 501

Query:   398 IWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
             +W L   +    I +G   G+W V FSP+D++L ++S D TIKLW L D+ CLK+ EGHD
Sbjct:   502 LWALPHCQLLG-IFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 560

Query:   455 ASVLRCHFINKGTQIVS--TGADGLLKLWSIKTSTCVSTFDKHALKI 499
             ASVL+  F+++GTQ++S  +G+DGL+KLW+IK + CV T D H  K+
Sbjct:   561 ASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTLDAHEDKV 607

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|J3KNP2 TBL3 "Transducin beta-like protein 3" [Homo sapiens (taxid:9606)]

 Score = 290 (107.1 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
 Identities = 67/177 (37%), Positives = 100/177 (56%)

Query:   332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---GTQIVSTGADGLLKLWSIKTST-- 386
             +  L +GS D TVK+W     L   N    +       Q      D  +   +I  +   
Sbjct:   323 ESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKL 382

Query:   387 -CVSTFDKHALKIWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLT 442
                 + D+ A K+W L   +    + +G   G+W V FSP+D++L ++S D TIKLW L 
Sbjct:   383 LATGSQDRTA-KLWALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 440

Query:   443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             D+ CLK+ EGHDASVL+  F+++GTQ++S+G+DGL+KLW+IK + CV T D H  K+
Sbjct:   441 DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKV 497

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

ZFIN|ZDB-GENE-041114-104 tbl3 "transducin (beta)-like 3" [Danio rerio (taxid:7955)]

 Score = 336 (123.3 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
 Identities = 86/227 (37%), Positives = 130/227 (57%)

Query:   287 LLASGSLDKTVKVW--STTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKT 343
             + A+ + DK+V+VW    + G ++  V +G   GH   +  +  S    + + SGS D T
Sbjct:   400 MFATCAKDKSVRVWRMDVSSG-RVHCVAQG--TGHSNAVGSIACSRMKQQFVVSGSQDCT 456

Query:   344 VKVWS---TTGG-----LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
             VKVW    TTG      +K  +  R H+K    V    +  L L S        + D+ A
Sbjct:   457 VKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKL-LAS-------GSQDRTA 508

Query:   396 LKIWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
              K+W L+  +    +  G   GVW V FSP+D+IL S+S D ++++W + D+ CLK+ EG
Sbjct:   509 -KLWALSDLRLLG-VCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEG 566

Query:   453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             HDASVL+  F+++GTQ+VS+G+DGL+KLW+IKT+ CV T D H  K+
Sbjct:   567 HDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKV 613

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0010564 "regulation of cell cycle process" evidence=IMP

GO:0030098 "lymphocyte differentiation" evidence=IMP

GO:0048538 "thymus development" evidence=IMP

TAIR|locus:2148965 TOZ "AT5G16750" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
 Identities = 87/234 (37%), Positives = 126/234 (53%)

Query:   281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGS 339
             + G V L+ +GS DKTV++W+ T    +     G   GH  DI  V  +        SGS
Sbjct:   413 SSGNV-LIVTGSKDKTVRLWNATSKSCI-----GVGTGHNGDILAVAFAKKSFSFFVSGS 466

Query:   340 LDKTVKVWSTTG---------GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST 390
              D+T+KVWS  G          LK  +V+  H K    V+   +  L         C  +
Sbjct:   467 GDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL--------VCTGS 518

Query:   391 FDKHALKIWTLAITKDENQIIT-GG----VWFVNFSPLDRILISSSGDATIKLWCLTDYV 445
              D+ A  IW L    D   ++T  G    ++ V FS +D+ ++++SGD T+K+W ++D  
Sbjct:   519 EDRTA-SIWRLP---DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGS 574

Query:   446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
             CLK+ EGH +SVLR  FI  GTQ VS GADGLLKLW++ TS C++T+D+H  K+
Sbjct:   575 CLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKV 628

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP

GO:0009880 "embryonic pattern specification" evidence=RCA;IMP

GO:0051301 "cell division" evidence=RCA;IMP

GO:0001510 "RNA methylation" evidence=RCA

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010072 "primary shoot apical meristem specification" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010431 "seed maturation" evidence=RCA

GO:0010564 "regulation of cell cycle process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0045595 "regulation of cell differentiation" evidence=RCA

GO:0048366 "leaf development" evidence=RCA

GO:0048825 "cotyledon development" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	537
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-40
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-40
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-40
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-37
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-23
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-23
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-15
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-08
smart00320	40	smart00320, WD40, WD40 repeats	7e-08
smart00320	40	smart00320, WD40, WD40 repeats	3e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-05
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	5e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  148 bits (375), Expect = 1e-40
 Identities = 72/220 (32%), Positives = 102/220 (46%), Gaps = 33/220 (15%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +LLA+GS D T+KVW    G  L  +     KGH   +  V  S +   LASGS DKT++
Sbjct: 22  KLLATGSGDGTIKVWDLETGELLRTL-----KGHTGPVRDVAASADGTYLASGSSDKTIR 76

Query: 346 VWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G + +  L GH            G  + S+  D  +K+W ++T  C++T   H 
Sbjct: 77  LWDLETG-ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH- 134

Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                           T  V  V FSP    + SSS D TIKLW L    C+ +L GH  
Sbjct: 135 ----------------TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTG 178

Query: 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
            V    F   G +++S+ +DG +KLW + T  C+ T   H
Sbjct: 179 EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH 218

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  148 bits (375), Expect = 1e-40
 Identities = 69/207 (33%), Positives = 98/207 (47%), Gaps = 33/207 (15%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            +L+S S DKT+KVW    G K L  LRGH       +N V  SP+   +AS S D T+K
Sbjct: 106 RILSSSSRDKTIKVWDVETG-KCLTTLRGH----TDWVNSVAFSPDGTFVASSSQDGTIK 160

Query: 346 VWSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K +  L GH            G +++S+ +DG +KLW + T  C+ T   H 
Sbjct: 161 LWDLRTG-KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH- 218

Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                             GV  V FSP   +L S S D TI++W L    C+++L GH  
Sbjct: 219 ----------------ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTN 262

Query: 456 SVLRCHFINKGTQIVSTGADGLLKLWS 482
           SV    +   G ++ S  ADG +++W 
Sbjct: 263 SVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  147 bits (373), Expect = 2e-40
 Identities = 80/220 (36%), Positives = 108/220 (49%), Gaps = 33/220 (15%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
             LASGS DKT+++W    G + +  L     GH   ++ V  SP+ ++L+S S DKT+K
Sbjct: 64  TYLASGSSDKTIRLWDLETG-ECVRTL----TGHTSYVSSVAFSPDGRILSSSSRDKTIK 118

Query: 346 VWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           VW    G K L  LRGH            GT + S+  DG +KLW ++T  CV+T   H 
Sbjct: 119 VWDVETG-KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGH- 176

Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                           TG V  V FSP    L+SSS D TIKLW L+   CL +L GH+ 
Sbjct: 177 ----------------TGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHEN 220

Query: 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
            V    F   G  + S   DG +++W ++T  CV T   H
Sbjct: 221 GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGH 260

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  137 bits (348), Expect = 7e-37
 Identities = 72/189 (38%), Positives = 93/189 (49%), Gaps = 28/189 (14%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GT 366
           KGH   + CV  SP+ KLLA+GS D T+KVW    G +LL  L+GH            GT
Sbjct: 6   KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG-ELLRTLKGHTGPVRDVAASADGT 64

Query: 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRI 426
            + S  +D  ++LW ++T  CV T   H                 T  V  V FSP  RI
Sbjct: 65  YLASGSSDKTIRLWDLETGECVRTLTGH-----------------TSYVSSVAFSPDGRI 107

Query: 427 LISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486
           L SSS D TIK+W +    CL +L GH   V    F   GT + S+  DG +KLW ++T 
Sbjct: 108 LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG 167

Query: 487 TCVSTFDKH 495
            CV+T   H
Sbjct: 168 KCVATLTGH 176

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  104 bits (258), Expect = 1e-23
 Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 38/247 (15%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           ELL SGS D T+K+W    G KL+  L G        +   +   N  LLAS SLD TVK
Sbjct: 78  ELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK 137

Query: 346 VWSTTGGLKLLNVLRGHKKGTQ-----------IVSTGADGLLKLWSIKTSTCVSTFDKH 394
           +W  +   KL+  L GH +                 +  DG +KLW ++T   +ST   H
Sbjct: 138 LWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH 197

Query: 395 ALKIWTLAITKDENQIITGGVW--------------------------FVNFSPLDRILI 428
              + +LA + D   +I  G                              +FSP   +L 
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLA 257

Query: 429 SSSGDATIKLWCL-TDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
           S S D TI+LW L +    L++L GH +SVL   F   G  + S  +DG ++LW ++T  
Sbjct: 258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK 317

Query: 488 CVSTFDK 494
            +S+   
Sbjct: 318 LLSSLTL 324

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  102 bits (253), Expect = 4e-23
 Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 42/244 (17%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
           L+ASGS D T+++W  + G  L + L GH           + SP+  LLASGS D T+++
Sbjct: 213 LIASGSSDGTIRLWDLSTGKLLRSTLSGHSDS-----VVSSFSPDGSLLASGSSDGTIRL 267

Query: 347 WSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVS--TFDKH 394
           W       LL  L GH            G  + S  +DG ++LW ++T   +S  T   H
Sbjct: 268 WDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGH 327

Query: 395 ALKIWTLAITKDENQIITGG-------------------------VWFVNFSPLDRILIS 429
              + +L+ + D + +++GG                         V  V+FSP  R++ S
Sbjct: 328 EGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSS 387

Query: 430 SSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV 489
            S D T++LW L+    L++L+GH + V    F   G  + S  +D  ++LW +KTS   
Sbjct: 388 GSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKS 447

Query: 490 STFD 493
            +F 
Sbjct: 448 VSFS 451

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 77.1 bits (188), Expect = 6e-15
 Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 35/197 (17%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQ--------- 367
           +GHE  I  +  SP+ +LL SGS D T+K+W    G KL+  L G    +          
Sbjct: 62  RGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPD 121

Query: 368 -----IVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
                + S+  DG +KLW + T    + T + H                 +  V  + FS
Sbjct: 122 GNSILLASSSLDGTVKLWDLSTPGKLIRTLEGH-----------------SESVTSLAFS 164

Query: 422 PLDRILISSSG-DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTGADGLLK 479
           P  ++L S S  D TIKLW L     L +L GH   V    F   G   I S  +DG ++
Sbjct: 165 PDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224

Query: 480 LWSIKTSTCV-STFDKH 495
           LW + T   + ST   H
Sbjct: 225 LWDLSTGKLLRSTLSGH 241

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 17/32 (53%), Positives = 20/32 (62%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
           KGH   +  V  SP+  LLASGS D TV+VW 
Sbjct: 8   KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 48.5 bits (116), Expect = 7e-08
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
           KGH   +  V  SP+ K LASGS D T+K+W 
Sbjct: 9   KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
            LK+L+GH   V    F   G  + S   DG +KLW 
Sbjct: 4   LLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
             L++L+GH   V    F   G  + S   DG +++W 
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 42.6 bits (100), Expect = 5e-04
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 39/157 (24%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK---KGHEKDINCVTVSP-NDKLLASGSLD 341
           E+LASGS D T++VW      + +  ++  +   KGH+K I+ +  +P N  ++ S   D
Sbjct: 88  EILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD 147

Query: 342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS----TCV--------- 388
             V +W           +   K+  QI        LK W+IK +    TCV         
Sbjct: 148 SFVNIWD----------IENEKRAFQINMPKKLSSLK-WNIKGNLLSGTCVGKHMHIIDP 196

Query: 389 ------STF-----DKHALKIWTLAITKDENQIITGG 414
                 S+F      K+   IW   +  D+N I++ G
Sbjct: 197 RKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTG 233

Length = 568

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.2 bits (97), Expect = 9e-04
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSE 505
             ++L+GH   V    F   G  + +   DG +K+W ++T   + T   H   +R+  + 
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 506 NDHK 509
            D  
Sbjct: 61  ADGT 64

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 412 TGGVWFVNFSPLDRILISSSGDATIKLW 439
           TG V  V FSP   +L S S D T+++W
Sbjct: 11  TGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 28/148 (18%)

Query: 366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG-------VWFV 418
           +Q+ S+  +G++++W +  S  V+   +H  ++W++  +  +  ++  G       +W +
Sbjct: 546 SQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605

Query: 419 NF-------------------SPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVL 458
           N                    S   R L   S D  +  + L +  + L ++ GH  +V 
Sbjct: 606 NQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVS 665

Query: 459 RCHFINKGTQIVSTGADGLLKLWSIKTS 486
              F++  T +VS+  D  LKLW +  S
Sbjct: 666 YVRFVDSST-LVSSSTDNTLKLWDLSMS 692

Length = 793

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	537
KOG0271|consensus	480		100.0
KOG0319|consensus	775		100.0
KOG0271|consensus	480		100.0
KOG0319|consensus	775		100.0
KOG0318|consensus	603		100.0
KOG0291|consensus	893		100.0
KOG0306|consensus	888		100.0
KOG0272|consensus	459		100.0
KOG0291|consensus	893		100.0
KOG0272|consensus	459		100.0
KOG0318|consensus	603		100.0
KOG1408|consensus	1080		100.0
KOG0306|consensus	888		100.0
KOG0286|consensus	343		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0276|consensus	794		100.0
KOG1539|consensus	910		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0315|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0296|consensus	399		100.0
KOG0263|consensus	707		100.0
KOG0279|consensus	315		100.0
KOG0295|consensus	406		100.0
KOG0284|consensus	464		100.0
KOG1063|consensus	764		100.0
KOG0273|consensus	524		100.0
KOG0293|consensus	519		100.0
KOG0263|consensus	707		100.0
KOG0292|consensus	1202		100.0
KOG0265|consensus	338		100.0
KOG0285|consensus	460		100.0
KOG0296|consensus	399		100.0
KOG0645|consensus	312		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0266|consensus	456		100.0
KOG1539|consensus	910		100.0
KOG2106|consensus	626		100.0
KOG0316|consensus	307		100.0
KOG1408|consensus	1080		100.0
KOG0284|consensus	464		100.0
KOG0281|consensus	499		100.0
KOG0285|consensus	460		100.0
KOG0313|consensus	423		100.0
KOG0278|consensus	334		100.0
KOG0276|consensus	794		100.0
KOG0282|consensus	503		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0645|consensus	312		100.0
KOG0265|consensus	338		100.0
KOG0281|consensus	499		100.0
KOG0266|consensus	456		100.0
KOG0292|consensus	1202		99.98
PLN00181	793	protein SPA1-RELATED; Provisional	99.98
KOG2106|consensus	626		99.98
KOG1063|consensus	764		99.98
KOG0316|consensus	307		99.97
KOG0293|consensus	519		99.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.97
KOG1407|consensus	313		99.97
KOG0282|consensus	503		99.97
KOG2048|consensus	691		99.97
KOG1407|consensus	313		99.97
KOG0643|consensus	327		99.97
KOG0275|consensus	508		99.97
KOG0288|consensus	459		99.97
KOG0277|consensus	311		99.97
KOG0275|consensus	508		99.97
KOG1446|consensus	311		99.97
KOG0278|consensus	334		99.97
KOG0772|consensus	641		99.96
KOG0640|consensus	430		99.96
KOG1445|consensus	1012		99.96
KOG0288|consensus	459		99.96
KOG0305|consensus	484		99.96
KOG0283|consensus	712		99.96
KOG0283|consensus	712		99.96
KOG0310|consensus	487		99.96
KOG1036|consensus	323		99.96
KOG0305|consensus	484		99.96
KOG0268|consensus	433		99.96
KOG0772|consensus	641		99.96
KOG0973|consensus	942		99.95
KOG0643|consensus	327		99.95
KOG0289|consensus	506		99.95
KOG0310|consensus	487		99.95
KOG0299|consensus	479		99.95
KOG0647|consensus	347		99.95
KOG1446|consensus	311		99.95
KOG0641|consensus	350		99.95
KOG0313|consensus	423		99.95
KOG0308|consensus	735		99.95
KOG0277|consensus	311		99.95
KOG2048|consensus	691		99.95
KOG0308|consensus	735		99.95
KOG0274|consensus	537		99.95
KOG0274|consensus	537		99.95
KOG0289|consensus	506		99.94
KOG0641|consensus	350		99.94
PTZ00421	493	coronin; Provisional	99.94
KOG0647|consensus	347		99.94
KOG0973|consensus	942		99.94
PTZ00420	568	coronin; Provisional	99.94
KOG1036|consensus	323		99.94
KOG0300|consensus	481		99.94
KOG0301|consensus	745		99.94
KOG0300|consensus	481		99.94
KOG0268|consensus	433		99.94
KOG0640|consensus	430		99.94
PTZ00421	493	coronin; Provisional	99.94
KOG0264|consensus	422		99.94
KOG0299|consensus	479		99.93
KOG2055|consensus	514		99.93
KOG1445|consensus	1012		99.93
KOG0646|consensus	476		99.93
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.93
KOG2096|consensus	420		99.93
KOG0264|consensus	422		99.93
PTZ00420	568	coronin; Provisional	99.93
KOG2096|consensus	420		99.92
KOG0646|consensus	476		99.92
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.92
KOG1332|consensus	299		99.92
KOG0294|consensus	362		99.92
KOG0294|consensus	362		99.92
KOG0639|consensus	705		99.92
KOG0639|consensus	705		99.92
KOG0301|consensus	745		99.92
KOG2445|consensus	361		99.91
KOG0650|consensus	733		99.91
KOG4283|consensus	397		99.91
KOG1963|consensus	792		99.9
KOG0267|consensus	825		99.9
KOG1274|consensus	933		99.9
KOG2055|consensus	514		99.9
KOG1332|consensus	299		99.9
KOG4283|consensus	397		99.89
KOG1274|consensus	933		99.89
KOG0269|consensus	839		99.89
KOG0650|consensus	733		99.89
KOG2445|consensus	361		99.88
KOG0321|consensus	720		99.88
KOG1273|consensus	405		99.88
KOG1034|consensus	385		99.88
KOG1273|consensus	405		99.87
KOG1538|consensus	1081		99.87
KOG2919|consensus	406		99.87
KOG4497|consensus	447		99.87
KOG4378|consensus	673		99.87
KOG4328|consensus	498		99.87
KOG1538|consensus	1081		99.86
KOG4378|consensus	673		99.86
KOG0267|consensus	825		99.86
KOG2919|consensus	406		99.85
KOG0269|consensus	839		99.85
KOG0307|consensus	1049		99.85
KOG4328|consensus	498		99.85
KOG0302|consensus	440		99.85
COG2319	466	FOG: WD40 repeat [General function prediction only	99.85
KOG0321|consensus	720		99.84
KOG1963|consensus	792		99.84
KOG0302|consensus	440		99.84
KOG1009|consensus	434		99.83
KOG0270|consensus	463		99.83
KOG1009|consensus	434		99.83
KOG0322|consensus	323		99.81
KOG0307|consensus	1049		99.8
KOG0642|consensus	577		99.8
KOG1034|consensus	385		99.79
KOG0270|consensus	463		99.79
KOG0322|consensus	323		99.79
KOG1188|consensus	376		99.78
KOG0644|consensus	1113		99.78
KOG4227|consensus	609		99.78
KOG1007|consensus	370		99.78
KOG4227|consensus	609		99.77
KOG2110|consensus	391		99.76
KOG1310|consensus	758		99.76
KOG1007|consensus	370		99.76
COG2319	466	FOG: WD40 repeat [General function prediction only	99.76
KOG0649|consensus	325		99.75
KOG1188|consensus	376		99.75
KOG1517|consensus	1387		99.75
KOG0303|consensus	472		99.75
KOG1524|consensus	737		99.75
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.74
KOG0642|consensus	577		99.73
KOG0290|consensus	364		99.73
PRK11028	330	6-phosphogluconolactonase; Provisional	99.73
KOG1524|consensus	737		99.72
KOG4497|consensus	447		99.72
KOG0644|consensus	1113		99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.72
KOG1587|consensus	555		99.7
KOG2110|consensus	391		99.7
KOG0649|consensus	325		99.7
KOG0303|consensus	472		99.69
KOG1334|consensus	559		99.69
PRK11028	330	6-phosphogluconolactonase; Provisional	99.68
KOG1310|consensus	758		99.68
KOG2394|consensus	636		99.68
KOG1517|consensus	1387		99.67
KOG1587|consensus	555		99.67
KOG1523|consensus	361		99.65
KOG2315|consensus	566		99.65
KOG1272|consensus	545		99.64
KOG2111|consensus	346		99.64
KOG3881|consensus	412		99.64
KOG1334|consensus	559		99.63
KOG0771|consensus	398		99.63
PRK03629	429	tolB translocation protein TolB; Provisional	99.63
PRK01742	429	tolB translocation protein TolB; Provisional	99.63
KOG0974|consensus	967		99.63
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.62
KOG2111|consensus	346		99.62
KOG0771|consensus	398		99.62
KOG2394|consensus	636		99.62
KOG0290|consensus	364		99.62
KOG1240|consensus	1431		99.61
PRK04922	433	tolB translocation protein TolB; Provisional	99.61
KOG1912|consensus	1062		99.6
KOG2139|consensus	445		99.6
PRK03629	429	tolB translocation protein TolB; Provisional	99.6
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.59
KOG1272|consensus	545		99.59
KOG2321|consensus	703		99.57
PRK02889	427	tolB translocation protein TolB; Provisional	99.57
KOG1240|consensus	1431		99.56
KOG1354|consensus	433		99.55
KOG2139|consensus	445		99.55
KOG1523|consensus	361		99.54
KOG2315|consensus	566		99.52
KOG3881|consensus	412		99.51
PRK05137	435	tolB translocation protein TolB; Provisional	99.51
PRK04922	433	tolB translocation protein TolB; Provisional	99.51
PRK05137	435	tolB translocation protein TolB; Provisional	99.51
KOG2321|consensus	703		99.5
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.49
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.47
COG4946	668	Uncharacterized protein related to the periplasmic	99.46
KOG2314|consensus	698		99.46
PRK02889	427	tolB translocation protein TolB; Provisional	99.45
KOG0974|consensus	967		99.45
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.44
KOG1354|consensus	433		99.42
KOG2314|consensus	698		99.42
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.39
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.38
PRK00178	430	tolB translocation protein TolB; Provisional	99.38
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.38
KOG1409|consensus	404		99.38
KOG4547|consensus	541		99.37
KOG4547|consensus	541		99.37
KOG1912|consensus	1062		99.36
PRK04792	448	tolB translocation protein TolB; Provisional	99.35
PRK01029	428	tolB translocation protein TolB; Provisional	99.32
PRK04792	448	tolB translocation protein TolB; Provisional	99.3
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.3
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.29
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.29
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.28
KOG0309|consensus	1081		99.27
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.27
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.26
KOG2041|consensus	1189		99.26
KOG1409|consensus	404		99.25
PRK00178	430	tolB translocation protein TolB; Provisional	99.24
COG4946	668	Uncharacterized protein related to the periplasmic	99.18
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.16
KOG1064|consensus	2439		99.16
PRK01029	428	tolB translocation protein TolB; Provisional	99.16
KOG1064|consensus	2439		99.14
KOG0280|consensus	339		99.11
KOG4190|consensus	1034		99.09
KOG2041|consensus	1189		99.08
KOG4532|consensus	344		99.04
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.04
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.01
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.99
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.98
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.94
KOG3914|consensus	390		98.91
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.86
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.86
PRK04043	419	tolB translocation protein TolB; Provisional	98.85
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.83
PRK04043	419	tolB translocation protein TolB; Provisional	98.83
KOG4649|consensus	354		98.82
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.82
KOG2695|consensus	425		98.81
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.81
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.8
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.8
KOG4190|consensus	1034		98.78
KOG4532|consensus	344		98.78
PRK02888	635	nitrous-oxide reductase; Validated	98.74
KOG0280|consensus	339		98.74
KOG4714|consensus	319		98.72
KOG0309|consensus	1081		98.72
KOG3914|consensus	390		98.71
KOG2066|consensus	846		98.67
KOG0882|consensus	558		98.66
KOG4649|consensus	354		98.63
KOG0882|consensus	558		98.63
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.62
KOG4714|consensus	319		98.62
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.61
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.56
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.55
KOG2695|consensus	425		98.52
KOG1275|consensus	1118		98.51
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.5
KOG1275|consensus	1118		98.42
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.41
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.35
KOG2114|consensus	933		98.32
KOG1920|consensus	1265		98.25
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.25
KOG1832|consensus	1516		98.24
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.21
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.15
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.11
KOG3621|consensus	726		98.1
KOG1920|consensus	1265		98.05
KOG2114|consensus	933		98.05
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.04
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.04
KOG1832|consensus	1516		98.02
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.01
KOG1897|consensus	1096		97.99
PRK02888	635	nitrous-oxide reductase; Validated	97.95
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.91
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.9
KOG2066|consensus	846		97.9
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.89
KOG3621|consensus	726		97.87
KOG3617|consensus	1416		97.86
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.85
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.82
KOG1645|consensus	463		97.81
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.79
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.76
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.74
KOG4640|consensus	665		97.71
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.68
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.66
KOG1645|consensus	463		97.62
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.62
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.59
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.58
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.56
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.5
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.46
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.45
KOG1897|consensus	1096		97.44
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.42
KOG3617|consensus	1416		97.4
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.39
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.34
KOG1008|consensus	783		97.33
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.27
PRK13616	591	lipoprotein LpqB; Provisional	97.24
KOG2079|consensus	1206		97.22
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.18
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.16
KOG1008|consensus	783		97.15
COG3391	381	Uncharacterized conserved protein [Function unknow	97.15
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.14
KOG2444|consensus	238		97.12
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.11
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.08
KOG4640|consensus	665		97.05
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.04
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.99
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.93
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.77
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.7
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.66
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.65
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.58
COG3391	381	Uncharacterized conserved protein [Function unknow	96.52
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.51
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.5
KOG2079|consensus	1206		96.47
KOG2395|consensus	644		96.42
PRK13616	591	lipoprotein LpqB; Provisional	96.25
KOG2444|consensus	238		96.24
KOG4499|consensus	310		96.23
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	96.22
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.22
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.18
KOG4441|consensus	571		95.99
PHA02713	557	hypothetical protein; Provisional	95.83
PF14727	418	PHTB1_N: PTHB1 N-terminus	95.77
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.75
KOG2395|consensus	644		95.66
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.65
KOG1916|consensus	1283		95.58
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.57
PHA02713	557	hypothetical protein; Provisional	95.51
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	95.45
KOG1898|consensus	1205		95.22
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.16
COG5276	370	Uncharacterized conserved protein [Function unknow	95.16
PF14727	418	PHTB1_N: PTHB1 N-terminus	95.11
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.82
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.64
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	94.61
KOG4441|consensus	571		94.5
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	94.42
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	94.22
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	94.22
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.19
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.11
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.1
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.07
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.01
PHA03098	534	kelch-like protein; Provisional	93.54
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.54
COG5276	370	Uncharacterized conserved protein [Function unknow	92.96
PHA02790	480	Kelch-like protein; Provisional	92.64
PRK10115	686	protease 2; Provisional	92.07
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	92.04
KOG4460|consensus	741		91.99
KOG4499|consensus	310		91.93
KOG2377|consensus	657		91.9
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.9
PHA03098	534	kelch-like protein; Provisional	91.37
KOG3630|consensus	1405		91.29
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	90.97
COG4590	733	ABC-type uncharacterized transport system, permeas	90.93
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	90.9
KOG2377|consensus	657		90.88
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	90.88
KOG1916|consensus	1283		90.88
PRK13684	334	Ycf48-like protein; Provisional	90.68
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	90.54
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	90.05
COG5167	776	VID27 Protein involved in vacuole import and degra	89.7
KOG1900|consensus	1311		89.56
KOG1898|consensus	1205		89.45
KOG2280|consensus	829		89.41
KOG2280|consensus	829		89.14
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	88.99
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	88.88
COG5167	776	VID27 Protein involved in vacuole import and degra	88.72
KOG1983|consensus	993		88.5
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	88.02
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	87.81
PF13449	326	Phytase-like: Esterase-like activity of phytase	87.58
KOG3630|consensus	1405		87.02
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	85.87
PHA02790	480	Kelch-like protein; Provisional	85.79
KOG3616|consensus	1636		85.73
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	85.55
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	85.53
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	85.15
KOG4460|consensus	741		84.64
COG1520	370	FOG: WD40-like repeat [Function unknown]	84.58
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	84.18
COG4590	733	ABC-type uncharacterized transport system, permeas	83.41
KOG2247|consensus	615		82.84
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	82.39
COG3292	671	Predicted periplasmic ligand-binding sensor domain	82.2
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	81.49
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	81.46
KOG0783|consensus	1267		81.06

>KOG0271|consensus

Probab=100.00  E-value=1e-55  Score=374.05  Aligned_cols=351  Identities=23%  Similarity=0.248  Sum_probs=298.8

Q ss_pred             hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      +-..+.+| ++|.+++|+|+|+.||+|+.|.++|+||+.+           ..+..+.++|..+|.|++|+ ||+..|++
T Consensus       107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T-----------eTp~~t~KgH~~WVlcvaws-PDgk~iAS  174 (480)
T KOG0271|consen  107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT-----------ETPLFTCKGHKNWVLCVAWS-PDGKKIAS  174 (480)
T ss_pred             eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC-----------CCcceeecCCccEEEEEEEC-CCcchhhc
Confidence            34455555 6999999999999999999999999999999           78899999999999999999 89999999


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcc-----cC
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTV-----KE  239 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s-----~~  239 (537)
                      ++.++.    |                 ++||.       +++++.   |.     +|  ...|+++   +|.     |.
T Consensus       175 G~~dg~----I-----------------~lwdp-------ktg~~~g~~l~-----gH--~K~It~L---awep~hl~p~  216 (480)
T KOG0271|consen  175 GSKDGS----I-----------------RLWDP-------KTGQQIGRALR-----GH--KKWITAL---AWEPLHLVPP  216 (480)
T ss_pred             cccCCe----E-----------------EEecC-------CCCCccccccc-----Cc--ccceeEE---eecccccCCC
Confidence            888877    9                 99999       888887   78     99  9999999   665     46


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-----eEEEEEeCCCeEEEEECCCCceeeeee
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-----ELLASGSLDKTVKVWSTTGGLKLLNVL  312 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-----~~l~~~~~d~~i~i~~~~~~~~~~~~~  312 (537)
                      .++||+++.||.++  |||+..    ..+     +..+.+|+.  .++     .++++|+.|++|++|+...+..     
T Consensus       217 ~r~las~skDg~vr--IWd~~~----~~~-----~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~-----  280 (480)
T KOG0271|consen  217 CRRLASSSKDGSVR--IWDTKL----GTC-----VRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKL-----  280 (480)
T ss_pred             ccceecccCCCCEE--EEEccC----ceE-----EEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhH-----
Confidence            78999999999999  999988    445     777888887  455     7999999999999999998865     


Q ss_pred             cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC--CceeeE--EEEecCCCCEEEEEcCCCcEEEEECCCC-ee
Q psy10942        313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG--GLKLLN--VLRGHKKGTQIVSTGADGLLKLWSIKTS-TC  387 (537)
Q Consensus       313 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~--~~~~~~--~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~  387 (537)
                      ...+++|...|+.++.+.|. .|-+|..|.+=+-.....  ..+.+.  .......+..+++++.|.++.+|+.... ++
T Consensus       281 ~r~lkGHahwvN~lalsTdy-~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkp  359 (480)
T KOG0271|consen  281 CRELKGHAHWVNHLALSTDY-VLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKP  359 (480)
T ss_pred             HHhhcccchheeeeeccchh-hhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccc
Confidence            67789999999999998653 445554443211111000  000000  0011123689999999999999997654 57


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  467 (537)
                      +..+.+|..                 -|+.+.||||++++|+++.|..|++||..+|+.+.+|++|-+.|+.++|+.|.+
T Consensus       360 i~rmtgHq~-----------------lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsR  422 (480)
T KOG0271|consen  360 ITRMTGHQA-----------------LVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSR  422 (480)
T ss_pred             hhhhhchhh-----------------heeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCcc
Confidence            778888876                 678889999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        468 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       468 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|++++.|.++++|++++.++...+.+|.+.|           +++   .|+|||+.+++|+.|..+++|
T Consensus       423 LlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEV-----------f~v---DwspDG~rV~sggkdkv~~lw  478 (480)
T KOG0271|consen  423 LLVSGSKDSTLKVWDVRTKKLKQDLPGHADEV-----------FAV---DWSPDGQRVASGGKDKVLRLW  478 (480)
T ss_pred             EEEEcCCCceEEEEEeeeeeecccCCCCCceE-----------EEE---EecCCCceeecCCCceEEEee
Confidence            99999999999999999999999999999999           999   999999999999999999999

>KOG0319|consensus

Probab=100.00  E-value=3.5e-53  Score=387.96  Aligned_cols=409  Identities=36%  Similarity=0.615  Sum_probs=361.2

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      +..|++++|+  +|+..++++++|.++.+||+.+.+..+++|..+.++++  ++.+.+   ..+.+.+++|+|.+|.+++
T Consensus       192 ~S~vtsL~~~--~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~v--v~l~~~---~~~~~~~~~TaG~~g~~~~  264 (775)
T KOG0319|consen  192 KSAVTSLAFS--EDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESV--VRLREE---LGGKGEYIITAGGSGVVQY  264 (775)
T ss_pred             hhheeeeeec--cCCceEEEeccCcEEEEeehhhhhhhheechhhheeeE--EEechh---cCCcceEEEEecCCceEEE
Confidence            3579999999  89999999999999999999999999999999999999  666641   1112469999999999999


Q ss_pred             eeccceehhhhcCCC--cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc
Q psy10942         82 YETSAVKELYQHGLS--SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG  159 (537)
Q Consensus        82 wd~~~~~~~~~~~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  159 (537)
                      ||.++++++.+....  +.+..+...+....++..+.|.++.+||.++           .++.+.+-|..+.|.+|+|-.
T Consensus       265 ~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~-----------l~i~k~ivG~ndEI~Dm~~lG  333 (775)
T KOG0319|consen  265 WDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDE-----------LTIVKQIVGYNDEILDMKFLG  333 (775)
T ss_pred             EecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccc-----------cEEehhhcCCchhheeeeecC
Confidence            999999998776644  3566676666666667778889999999999           899999999999999999998


Q ss_pred             CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc
Q psy10942        160 EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       160 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      |++++|++|++...    +                 ++++.       .+..|. +.     ||  ...|.++   ....
T Consensus       334 ~e~~~laVATNs~~----l-----------------r~y~~-------~~~~c~ii~-----GH--~e~vlSL---~~~~  375 (775)
T KOG0319|consen  334 PEESHLAVATNSPE----L-----------------RLYTL-------PTSYCQIIP-----GH--TEAVLSL---DVWS  375 (775)
T ss_pred             CccceEEEEeCCCc----e-----------------EEEec-------CCCceEEEe-----Cc--hhheeee---eecc
Confidence            99999999999988    9                 99999       999988 88     99  9999999   8667


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-------eEEEEEeCCCeEEEEECCCCceee
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-------ELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      +|.+|++|+.|.+++  +|+++++.....+     .....+|++  +++       .+|++++.|+++++|++...+...
T Consensus       376 ~g~llat~sKD~svi--lWr~~~~~~~~~~-----~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~  448 (775)
T KOG0319|consen  376 SGDLLATGSKDKSVI--LWRLNNNCSKSLC-----VAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETA  448 (775)
T ss_pred             cCcEEEEecCCceEE--EEEecCCcchhhh-----hhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccc
Confidence            788999999999999  9999665544555     667777776  333       899999999999999998732211


Q ss_pred             eee----cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        310 NVL----RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       310 ~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      ...    ......|...|++++++|+.+++++|+.|.+.+||+++ ......++.+|..                     
T Consensus       449 ~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le-~~~l~~vLsGH~R---------------------  506 (775)
T KOG0319|consen  449 FPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE-QLRLLGVLSGHTR---------------------  506 (775)
T ss_pred             ccceehhhHHHHhhcccccceEecCCCceEEecccccceeeeccc-CceEEEEeeCCcc---------------------
Confidence            110    22456799999999999999999999999999999999 8888888888876                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                                                  +++++.|+|..+.+++++.|++|+||.+.++.++.++.||...|..+.|-.+
T Consensus       507 ----------------------------Gvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~  558 (775)
T KOG0319|consen  507 ----------------------------GVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRN  558 (775)
T ss_pred             ----------------------------ceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeC
Confidence                                        8999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        466 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       466 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++.|++++.||.+++|++.+++++.++..|.+.|           +++   +.+|.+..++||+.||.|.+|
T Consensus       559 ~~qliS~~adGliKlWnikt~eC~~tlD~H~Drv-----------WaL---~~~~~~~~~~tgg~Dg~i~~w  616 (775)
T KOG0319|consen  559 GKQLISAGADGLIKLWNIKTNECEMTLDAHNDRV-----------WAL---SVSPLLDMFVTGGGDGRIIFW  616 (775)
T ss_pred             CcEEEeccCCCcEEEEeccchhhhhhhhhcccee-----------EEE---eecCccceeEecCCCeEEEEe
Confidence            9999999999999999999999999999999999           999   999999999999999999998

>KOG0271|consensus

Probab=100.00  E-value=6.2e-51  Score=345.13  Aligned_cols=315  Identities=22%  Similarity=0.292  Sum_probs=274.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +.+++.++  .|.|        ++..+++|+.|.++++||+.+...+.+.++| .+|.+++|||||+.||+|+.||+|++
T Consensus       114 H~e~Vl~~--~fsp--------~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~l  183 (480)
T KOG0271|consen  114 HGEAVLSV--QFSP--------TGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRL  183 (480)
T ss_pred             CCCcEEEE--EecC--------CCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEE
Confidence            55566666  5577        7789999999999999999999999999988 59999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhccc----CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG----EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTF  198 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~w  198 (537)
                      ||.+++          .+..+.+++|...|++++|.|    +..++|++++.+++    +                 +||
T Consensus       184 wdpktg----------~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~----v-----------------rIW  232 (480)
T KOG0271|consen  184 WDPKTG----------QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS----V-----------------RIW  232 (480)
T ss_pred             ecCCCC----------CcccccccCcccceeEEeecccccCCCccceecccCCCC----E-----------------EEE
Confidence            999987          677889999999999999986    35567777777777    9                 999


Q ss_pred             HHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccce
Q psy10942        199 ERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEH  276 (537)
Q Consensus       199 d~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~  276 (537)
                      |+       ..+.++  +.     ||  ..+|+|+   .|--+| ++++++.|++|+  +|+...+.    +     .+.
T Consensus       233 d~-------~~~~~~~~ls-----gH--T~~VTCv---rwGG~g-liySgS~DrtIk--vw~a~dG~----~-----~r~  283 (480)
T KOG0271|consen  233 DT-------KLGTCVRTLS-----GH--TASVTCV---RWGGEG-LIYSGSQDRTIK--VWRALDGK----L-----CRE  283 (480)
T ss_pred             Ec-------cCceEEEEec-----cC--ccceEEE---EEcCCc-eEEecCCCceEE--EEEccchh----H-----HHh
Confidence            99       888887  88     99  9999999   776665 999999999999  99998842    2     333


Q ss_pred             eeeeeC--Ccc------------------------------------------eEEEEEeCCCeEEEEECCCCceeeeee
Q psy10942        277 GAFYTG--GTV------------------------------------------ELLASGSLDKTVKVWSTTGGLKLLNVL  312 (537)
Q Consensus       277 ~~~~~~--~~v------------------------------------------~~l~~~~~d~~i~i~~~~~~~~~~~~~  312 (537)
                      +.+|..  +.+                                          ..+++|+.|.++.+|+....++.    
T Consensus       284 lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkp----  359 (480)
T KOG0271|consen  284 LKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKP----  359 (480)
T ss_pred             hcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccc----
Confidence            444433  111                                          57999999999999998766543    


Q ss_pred             cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       313 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      .....+|..-|+.+.||||++++++++.|..|++|+.+ .++.+..+++|-.                            
T Consensus       360 i~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~-tGk~lasfRGHv~----------------------------  410 (480)
T KOG0271|consen  360 ITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGR-TGKFLASFRGHVA----------------------------  410 (480)
T ss_pred             hhhhhchhhheeeEEECCCccEEEEeecccceeeeeCC-Ccchhhhhhhccc----------------------------
Confidence            45568999999999999999999999999999999998 6666666666654                            


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                                           .|+.++|+.|.++|++|+.|.++++|++++.+....+.+|.+.|.++.|+|||..+++|
T Consensus       411 ---------------------~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sg  469 (480)
T KOG0271|consen  411 ---------------------AVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASG  469 (480)
T ss_pred             ---------------------eeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecC
Confidence                                 88999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCcEEEEE
Q psy10942        473 GADGLLKLWS  482 (537)
Q Consensus       473 ~~dg~v~vwd  482 (537)
                      +.|..+++|.
T Consensus       470 gkdkv~~lw~  479 (480)
T KOG0271|consen  470 GKDKVLRLWR  479 (480)
T ss_pred             CCceEEEeec
Confidence            9999999995

>KOG0319|consensus

Probab=100.00  E-value=6.5e-49  Score=360.01  Aligned_cols=448  Identities=15%  Similarity=0.222  Sum_probs=368.6

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      -+++++..  ||+++|+++++.+.+++|++.+++.++..+  +..|+..+  .+.|        .+..+++||.|+.++|
T Consensus        64 ~ita~~l~--~d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~m--a~~~--------~g~LlAtggaD~~v~V  131 (775)
T KOG0319|consen   64 EITALALT--PDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITM--AFDP--------TGTLLATGGADGRVKV  131 (775)
T ss_pred             hhheeeec--CCccEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEE--EEcC--------CCceEEeccccceEEE
Confidence            47899999  889999999999999999999999999887  46677767  5577        5589999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccE--EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRM--YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~--la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      ||+..+.+.+.++++ +.|.++.|.|+-.+  |++|..|+.+++||+.+.          ..++..+..|...|++++|+
T Consensus       132 Wdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~----------~tcl~~~~~H~S~vtsL~~~  201 (775)
T KOG0319|consen  132 WDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDK----------RTCLHTMILHKSAVTSLAFS  201 (775)
T ss_pred             EEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccC----------chHHHHHHhhhhheeeeeec
Confidence            999999999999985 68999999987765  889999999999999973          34678889999999999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCc
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                       +++..+++++.+..    +                 .+||+       .+.++.  ++      -  ...+.++   .+
T Consensus       202 -~d~~~~ls~~RDkv----i-----------------~vwd~-------~~~~~l~~lp------~--ye~~E~v---v~  241 (775)
T KOG0319|consen  202 -EDSLELLSVGRDKV----I-----------------IVWDL-------VQYKKLKTLP------L--YESLESV---VR  241 (775)
T ss_pred             -cCCceEEEeccCcE----E-----------------EEeeh-------hhhhhhheec------h--hhheeeE---EE
Confidence             67777888888877    8                 99999       555554  22      1  3345555   55


Q ss_pred             ccC-----CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC-CcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        237 VKE-----EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       237 s~~-----~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                      -++     |.++.+.+.+|.++  +|+..+..-.......+ ...+..-.. .....++....|..+.+||.++.+.   
T Consensus       242 l~~~~~~~~~~~~TaG~~g~~~--~~d~es~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i---  315 (775)
T KOG0319|consen  242 LREELGGKGEYIITAGGSGVVQ--YWDSESGKCVYKQRQSD-SEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTI---  315 (775)
T ss_pred             echhcCCcceEEEEecCCceEE--EEecccchhhhhhccCC-chhhhcceeccccCceEEEEccceEEEEEccccEE---
Confidence            555     67999999999999  99998854322222111 111111111 2225677778899999999888765   


Q ss_pred             eecccccccCCCeEEEEE-cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC----------CCCEEEEEcCCCcEEE
Q psy10942        311 VLRGHKKGHEKDINCVTV-SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKL  379 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~l~~~~~d~~i~i  379 (537)
                        ...+.+..+.|.+|+| .|+.++|++++..+.+++|++. +..+. .+.+|.          .|.++++++.|.++++
T Consensus       316 --~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~-~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svil  391 (775)
T KOG0319|consen  316 --VKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLP-TSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVIL  391 (775)
T ss_pred             --ehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecC-CCceE-EEeCchhheeeeeecccCcEEEEecCCceEEE
Confidence              4556788889999997 4678999999999999999887 33222 556664          3779999999999999


Q ss_pred             EECCCC----eeeeeeccCCcceEEEEEecCCCceEEe-----------------------------------eeeEEEE
Q psy10942        380 WSIKTS----TCVSTFDKHALKIWTLAITKDENQIITG-----------------------------------GVWFVNF  420 (537)
Q Consensus       380 ~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------------------~i~~~~~  420 (537)
                      |.++++    -++....+|...|..++.+..+..++..                                   .|+++++
T Consensus       392 Wr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vai  471 (775)
T KOG0319|consen  392 WRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAI  471 (775)
T ss_pred             EEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEe
Confidence            988544    3455668899999988887666444321                                   3999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee
Q psy10942        421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR  500 (537)
Q Consensus       421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~  500 (537)
                      +|+.+++|+|+.|.+.++|+++....+.++.+|...|.++.|+|..+.|+|+|.|++|+||.+++..+++++.||...| 
T Consensus       472 a~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV-  550 (775)
T KOG0319|consen  472 APNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV-  550 (775)
T ss_pred             cCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             ccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        501 NSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                ...   .|-.+|..|+|++.||-+++|
T Consensus       551 ----------lra---~F~~~~~qliS~~adGliKlW  574 (775)
T KOG0319|consen  551 ----------LRA---SFIRNGKQLISAGADGLIKLW  574 (775)
T ss_pred             ----------Eee---eeeeCCcEEEeccCCCcEEEE
Confidence                      888   999999999999999999999

>KOG0318|consensus

Probab=100.00  E-value=2.1e-46  Score=330.52  Aligned_cols=453  Identities=15%  Similarity=0.185  Sum_probs=350.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccce-ee-eec-cccccceeeeEeecCccccccCCcEEEEEe-Cccce
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ-LR-SYP-AYESLETCAVFHLSDETESKSGGKTFVLAG-GEKSL   78 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   78 (537)
                      ..||-..||  |.|.|+++|...|.|||||....+. ++ +++ ...+|..+  .|.++       +.+.+++| |.+..
T Consensus        60 ~~vtVAkyS--PsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di--~Wd~d-------s~RI~avGEGrerf  128 (603)
T KOG0318|consen   60 HQVTVAKYS--PSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDI--SWDFD-------SKRIAAVGEGRERF  128 (603)
T ss_pred             ceeEEEEeC--CCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccc--eeCCC-------CcEEEEEecCccce
Confidence            357888999  7799999999999999999876433 33 444 56678888  66774       55555555 33334


Q ss_pred             EEeeeccceehhhhcCCC-cceEEEEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhh
Q psy10942         79 LHYYETSAVKELYQHGLS-SPLVRIVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIA  156 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  156 (537)
                      .+++-+++|..+-.+.+| ..|.+++|-|...+ +++|+.|++|.+|.=..           .+...+++.|..-|.++.
T Consensus       129 g~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP-----------FKFk~s~r~HskFV~~VR  197 (603)
T KOG0318|consen  129 GHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP-----------FKFKSSFREHSKFVNCVR  197 (603)
T ss_pred             eEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC-----------eeeeecccccccceeeEE
Confidence            555556688888888877 48999999998875 99999999999998665           888889999999999999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCc
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                      |+ ||+.++++++.++.    +                 .+||-       .+++.+-....-.+|  .+.|.++   +|
T Consensus       198 ys-PDG~~Fat~gsDgk----i-----------------~iyDG-------ktge~vg~l~~~~aH--kGsIfal---sW  243 (603)
T KOG0318|consen  198 YS-PDGSRFATAGSDGK----I-----------------YIYDG-------KTGEKVGELEDSDAH--KGSIFAL---SW  243 (603)
T ss_pred             EC-CCCCeEEEecCCcc----E-----------------EEEcC-------CCccEEEEecCCCCc--cccEEEE---EE
Confidence            99 78999999988887    9                 99998       888777211123489  9999999   99


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc---eEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV---ELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                      +||+..+++++.|.+++  +||+..........+..   .+....-+++   ..|++.+.+|+|.+++......     .
T Consensus       244 sPDs~~~~T~SaDkt~K--IWdVs~~slv~t~~~~~---~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~-----~  313 (603)
T KOG0318|consen  244 SPDSTQFLTVSADKTIK--IWDVSTNSLVSTWPMGS---TVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSV-----L  313 (603)
T ss_pred             CCCCceEEEecCCceEE--EEEeeccceEEEeecCC---chhceEEEEEEeCCeEEEEEcCcEEEEecccCCCh-----h
Confidence            99999999999999999  99999853221111110   0000001222   6899999999999999998874     5


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------eEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------LNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                      ..+.+|...|+++..+|++++|++|+.||.|.-|+...+...          +..+..+. ...+++.+.|.++++.++.
T Consensus       314 ~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~-~~~~~t~g~Dd~l~~~~~~  392 (603)
T KOG0318|consen  314 KVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASE-SGELFTIGWDDTLRVISLK  392 (603)
T ss_pred             heecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecC-CCcEEEEecCCeEEEEecc
Confidence            667899999999999999999999999999999998743221          22222222 3678899999999999886


Q ss_pred             CCeeeee--eccCCcceEEEEEecCCCceEEe---------------------eeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        384 TSTCVST--FDKHALKIWTLAITKDENQIITG---------------------GVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       384 ~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~---------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      .+..-..  ++...++ ..++..+++..++..                     ...+++++|+++.+++|+.|+.|++|.
T Consensus       393 ~~~~t~~~~~~lg~QP-~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvys  471 (603)
T KOG0318|consen  393 DNGYTKSEVVKLGSQP-KGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYS  471 (603)
T ss_pred             cCcccccceeecCCCc-eeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEE
Confidence            5433222  1222222 255555554322211                     367899999999999999999999999


Q ss_pred             CCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE-EEecCCccceeccCCCCCCcccccccee
Q psy10942        441 LTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIRNSDSENDHKGFGLPRQL  517 (537)
Q Consensus       441 ~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~  517 (537)
                      +...+.  ...+..|.++|+++++|||+.+||++...+.+.+||+.+++.. ..+.-|...|           .++   +
T Consensus       472 l~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI-----------~~~---a  537 (603)
T KOG0318|consen  472 LSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKI-----------NCV---A  537 (603)
T ss_pred             ecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeE-----------EEE---E
Confidence            987553  3345679999999999999999999999999999999988764 3445599999           888   9


Q ss_pred             eecCCCEEEEEeCCCCEEeC
Q psy10942        518 CSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       518 ~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+|+..++|||+.|-.|.||
T Consensus       538 WsP~n~~vATGSlDt~Viiy  557 (603)
T KOG0318|consen  538 WSPNNKLVATGSLDTNVIIY  557 (603)
T ss_pred             eCCCceEEEeccccceEEEE
Confidence            99999999999999999998

>KOG0291|consensus

Probab=100.00  E-value=1e-44  Score=333.01  Aligned_cols=440  Identities=17%  Similarity=0.224  Sum_probs=344.6

Q ss_pred             eeeeeccCCcceEEEecCcceEEEEEcCccceee-eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc
Q psy10942          7 CFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS   85 (537)
Q Consensus         7 ~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~   85 (537)
                      .+.|+  +||..+++-..+. |.++|+++.+-.. .+.....|..+  ..+|        ++.++++..+.|...+-++.
T Consensus        19 nl~ft--~dG~sviSPvGNr-vsv~dLknN~S~Tl~~e~~~NI~~i--alSp--------~g~lllavdE~g~~~lvs~~   85 (893)
T KOG0291|consen   19 NLVFT--KDGNSVISPVGNR-VSVFDLKNNKSYTLPLETRYNITRI--ALSP--------DGTLLLAVDERGRALLVSLL   85 (893)
T ss_pred             cEEEC--CCCCEEEeccCCE-EEEEEccCCcceeEEeecCCceEEE--EeCC--------CceEEEEEcCCCcEEEEecc
Confidence            35677  8988888876655 9999998755332 44466677777  5588        77899999999999999999


Q ss_pred             ceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                      ....++.+.....|.++.|||||+++|++.. +.+.||.......   ....+..+.+++.+|.+.|.++.|+ .|.+.+
T Consensus        86 ~r~Vlh~f~fk~~v~~i~fSPng~~fav~~g-n~lqiw~~P~~~~---~~~~pFvl~r~~~g~fddi~si~Ws-~DSr~l  160 (893)
T KOG0291|consen   86 SRSVLHRFNFKRGVGAIKFSPNGKFFAVGCG-NLLQIWHAPGEIK---NEFNPFVLHRTYLGHFDDITSIDWS-DDSRLL  160 (893)
T ss_pred             cceeeEEEeecCccceEEECCCCcEEEEEec-ceeEEEecCcchh---cccCcceEeeeecCCccceeEEEec-cCCceE
Confidence            8888999888899999999999999998776 7899999876311   1355677888999999999999999 899999


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++++.+..    .                 ++|.+       +..+.. ....+.+|  .+.|.+.   -|..+...+++
T Consensus       161 ~~gsrD~s----~-----------------rl~~v-------~~~k~~-~~~~l~gH--kd~Vvac---fF~~~~~~l~t  206 (893)
T KOG0291|consen  161 VTGSRDLS----A-----------------RLFGV-------DGNKNL-FTYALNGH--KDYVVAC---FFGANSLDLYT  206 (893)
T ss_pred             Eeccccce----E-----------------EEEEe-------cccccc-ceEeccCC--CcceEEE---EeccCcceEEE
Confidence            88888877    8                 88888       444432 12223399  9999998   89999999999


Q ss_pred             ccCCCcceeccccccCCCc---------------------cc--cc---------ccc---cccceeeeeeCCcc-----
Q psy10942        246 QSMEPSTLEELEKRKTYHF---------------------PL--FG---------IFV---PEAEHGAFYTGGTV-----  285 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~---------------------~~--~~---------~~~---~~~~~~~~~~~~~v-----  285 (537)
                      .+.||.+.  +|.......                     ..  ..         .+.   ..+.....|....+     
T Consensus       207 vskdG~l~--~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgF  284 (893)
T KOG0291|consen  207 VSKDGALF--VWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGF  284 (893)
T ss_pred             EecCceEE--EEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEe
Confidence            99999999  998872100                     00  00         000   11111222222110     


Q ss_pred             -----------------------------------eEEEEEeCC-CeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942        286 -----------------------------------ELLASGSLD-KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS  329 (537)
Q Consensus       286 -----------------------------------~~l~~~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  329 (537)
                                                         ..++.|+.. |.+.+|+.++...+     ....+|...+++++++
T Consensus       285 ssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYV-----lKQQgH~~~i~~l~YS  359 (893)
T KOG0291|consen  285 SSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYV-----LKQQGHSDRITSLAYS  359 (893)
T ss_pred             cCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecccee-----eeccccccceeeEEEC
Confidence                                               344444433 56666666665542     3347899999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      |||+++++|+.||.|++||.. .+-++.++..|..          ++.+++.+.||+|+.||+......+++..+...  
T Consensus       360 pDgq~iaTG~eDgKVKvWn~~-SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~--  436 (893)
T KOG0291|consen  360 PDGQLIATGAEDGKVKVWNTQ-SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI--  436 (893)
T ss_pred             CCCcEEEeccCCCcEEEEecc-CceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce--
Confidence            999999999999999999999 6777777777654          889999999999999999999999998766521  


Q ss_pred             EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC-cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcE
Q psy10942        400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDA-TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLL  478 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  478 (537)
                                    ...+++..|.|.++..|+.|. .|.+|++++|+.+..+.||.++|.+++|+|++..||++|.|.+|
T Consensus       437 --------------QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTV  502 (893)
T KOG0291|consen  437 --------------QFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTV  502 (893)
T ss_pred             --------------eeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceE
Confidence                          567888899999999998875 69999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCe-eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        479 KLWSIKTST-CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       479 ~vwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+||+-... .+.+++ +...+           .++   +|+|||+.|+++.-||.|.+|
T Consensus       503 RiW~if~s~~~vEtl~-i~sdv-----------l~v---sfrPdG~elaVaTldgqItf~  547 (893)
T KOG0291|consen  503 RIWDIFSSSGTVETLE-IRSDV-----------LAV---SFRPDGKELAVATLDGQITFF  547 (893)
T ss_pred             EEEEeeccCceeeeEe-eccce-----------eEE---EEcCCCCeEEEEEecceEEEE
Confidence            999986542 333443 34456           788   999999999999999999988

>KOG0306|consensus

Probab=100.00  E-value=6.1e-45  Score=334.34  Aligned_cols=426  Identities=16%  Similarity=0.216  Sum_probs=342.0

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeec---cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ   92 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~   92 (537)
                      |++++... .-.|.+||+++|+..+.+-   ...+++.+  ..+|        +..++++|.+||.|++|++.++..+.+
T Consensus        34 Gr~va~~a-~E~vn~WdlRtge~~~~l~~~~~k~evt~l--~~~~--------d~l~lAVGYaDGsVqif~~~s~~~~~t  102 (888)
T KOG0306|consen   34 GRAVAVSA-LEQVNIWDLRTGEIEKKLILLKKKAEVTCL--RSSD--------DILLLAVGYADGSVQIFSLESEEILIT  102 (888)
T ss_pred             CcEEEEec-cccEeEEeeecchhhhhhhhhcccceEEEe--eccC--------CcceEEEEecCceEEeeccCCCceeee
Confidence            55555532 3359999999996665443   22233333  3345        778899999999999999999988888


Q ss_pred             cCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         93 HGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        93 ~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      +.+| .+|+.+.|+..|..||+|+.|+.|.+||+-.           ..-..+++||.+.|+.+-|. .+++.+++.+.+
T Consensus       103 fngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~-----------E~Gl~rL~GHkd~iT~~~F~-~~~~~lvS~sKD  170 (888)
T KOG0306|consen  103 FNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVG-----------EEGLFRLRGHKDSITQALFL-NGDSFLVSVSKD  170 (888)
T ss_pred             ecccccceEEEEEcccCceEeecCCCccEEEEEecc-----------ceeeEEeecchHHHhHHhcc-CCCeEEEEeccC
Confidence            8877 5999999999999999999999999999998           67788999999999999998 677888888887


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                      ..    +                 ++||+       .+..|.  .-     .|  .+.+..+   ++.+  +.+++++.|
T Consensus       171 s~----i-----------------K~WdL-------~tqhCf~Thv-----d~--r~Eiw~l---~~~~--~~lvt~~~d  210 (888)
T KOG0306|consen  171 SM----I-----------------KFWDL-------ETQHCFETHV-----DH--RGEIWAL---VLDE--KLLVTAGTD  210 (888)
T ss_pred             ce----E-----------------EEEec-------ccceeeeEEe-----cc--cceEEEE---EEec--ceEEEEecC
Confidence            77    9                 99999       888888  55     78  9999999   8877  788999999


Q ss_pred             CcceeccccccCCCcc-----------------------cccccccccceee----------------------------
Q psy10942        250 PSTLEELEKRKTYHFP-----------------------LFGIFVPEAEHGA----------------------------  278 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~-----------------------~~~~~~~~~~~~~----------------------------  278 (537)
                      +.++  +|++......                       ......+.-+.+.                            
T Consensus       211 se~~--v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k  288 (888)
T KOG0306|consen  211 SELK--VWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLK  288 (888)
T ss_pred             CceE--EEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHH
Confidence            9999  9998211000                       0000000000000                            


Q ss_pred             --------------------------------------------------------------------------------
Q psy10942        279 --------------------------------------------------------------------------------  278 (537)
Q Consensus       279 --------------------------------------------------------------------------------  278 (537)
                                                                                                      
T Consensus       289 ~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~  368 (888)
T KOG0306|consen  289 RAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIE  368 (888)
T ss_pred             HhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceee
Confidence                                                                                            


Q ss_pred             --eeeC--Ccc-----eEEEEEeCCCeEEEEECCCCceeeee-----------------------------------ecc
Q psy10942        279 --FYTG--GTV-----ELLASGSLDKTVKVWSTTGGLKLLNV-----------------------------------LRG  314 (537)
Q Consensus       279 --~~~~--~~v-----~~l~~~~~d~~i~i~~~~~~~~~~~~-----------------------------------~~~  314 (537)
                        +|..  .++     +.++..+..+.+++|+..+.+.+..+                                   +..
T Consensus       369 ~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~E  448 (888)
T KOG0306|consen  369 IGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVE  448 (888)
T ss_pred             eccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhh
Confidence              0000  000     23334444567888887765544321                                   022


Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC------Cc---------------eeeEEEEecCCCCEEEEEcC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG------GL---------------KLLNVLRGHKKGTQIVSTGA  373 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~------~~---------------~~~~~~~~~~~~~~l~~~~~  373 (537)
                      ..+.|.+.|.+++.+||++.+++|+.|.+|++||...      ..               ..+-.+...|++.+++++-.
T Consensus       449 ti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLL  528 (888)
T KOG0306|consen  449 TIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLL  528 (888)
T ss_pred             hhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEec
Confidence            3468999999999999999999999999999999751      00               11334556678999999999


Q ss_pred             CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC
Q psy10942        374 DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       374 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  453 (537)
                      |+++++|-+.+.+....+.+|.-                 +|.++..|||++.+++|+.|..|++|-+.-|.+...+-+|
T Consensus       529 dnTVkVyflDtlKFflsLYGHkL-----------------PV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAH  591 (888)
T KOG0306|consen  529 DNTVKVYFLDTLKFFLSLYGHKL-----------------PVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAH  591 (888)
T ss_pred             cCeEEEEEecceeeeeeeccccc-----------------ceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcc
Confidence            99999999999999999999987                 7788888899999999999999999999999999999999


Q ss_pred             CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        454 DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      .+.|.++.|-|+...+.+++.|+.|+-||-..-+.++.+.+|...|           +++   +.+|+|.+++++|.|.+
T Consensus       592 dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev-----------~cL---av~~~G~~vvs~shD~s  657 (888)
T KOG0306|consen  592 DDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEV-----------WCL---AVSPNGSFVVSSSHDKS  657 (888)
T ss_pred             cCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchhee-----------eee---EEcCCCCeEEeccCCce
Confidence            9999999999999999999999999999999999999999999999           999   99999999999999999


Q ss_pred             EEeC
Q psy10942        534 VVVY  537 (537)
Q Consensus       534 i~vW  537 (537)
                      ||+|
T Consensus       658 IRlw  661 (888)
T KOG0306|consen  658 IRLW  661 (888)
T ss_pred             eEee
Confidence            9999

>KOG0272|consensus

Probab=100.00  E-value=1.3e-46  Score=323.08  Aligned_cols=278  Identities=20%  Similarity=0.277  Sum_probs=254.3

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~~~  175 (537)
                      .+|..+.||+|++.||+|+.+|.+++|+...           ...+.++.||...|.++.|+|. ++..+++++.++.  
T Consensus       176 rPis~~~fS~ds~~laT~swsG~~kvW~~~~-----------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgt--  242 (459)
T KOG0272|consen  176 RPISGCSFSRDSKHLATGSWSGLVKVWSVPQ-----------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGT--  242 (459)
T ss_pred             CcceeeEeecCCCeEEEeecCCceeEeecCC-----------cceeEEEeccccceeeEEEccCCCccceeeeccCCc--
Confidence            5899999999999999999999999999999           7889999999999999999976 3668888888877  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                        +                 ++|++       .+...+  +.     +|  ...|..+   +|+|+|++|++++.|.+-+
T Consensus       243 --v-----------------klw~~-------~~e~~l~~l~-----gH--~~RVs~V---afHPsG~~L~TasfD~tWR  286 (459)
T KOG0272|consen  243 --V-----------------KLWKL-------SQETPLQDLE-----GH--LARVSRV---AFHPSGKFLGTASFDSTWR  286 (459)
T ss_pred             --e-----------------eeecc-------CCCcchhhhh-----cc--hhhheee---eecCCCceeeecccccchh
Confidence              9                 99999       765555  88     99  9999999   9999999999999999999


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +||+.+..                                           .     .-..++|...|.+++|.|||.
T Consensus       287 --lWD~~tk~-------------------------------------------E-----lL~QEGHs~~v~~iaf~~DGS  316 (459)
T KOG0272|consen  287 --LWDLETKS-------------------------------------------E-----LLLQEGHSKGVFSIAFQPDGS  316 (459)
T ss_pred             --hcccccch-------------------------------------------h-----hHhhcccccccceeEecCCCc
Confidence              88888732                                           1     223468999999999999999


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      ++++|+.|..-+|||++ ++..+..+.+|.+                                                 
T Consensus       317 L~~tGGlD~~~RvWDlR-tgr~im~L~gH~k-------------------------------------------------  346 (459)
T KOG0272|consen  317 LAATGGLDSLGRVWDLR-TGRCIMFLAGHIK-------------------------------------------------  346 (459)
T ss_pred             eeeccCccchhheeecc-cCcEEEEeccccc-------------------------------------------------
Confidence            99999999998999988 6666666666655                                                 


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      .|.+++|+|+|..||+|+.|++++|||++..+.+.++.+|.+-|+.++|+| .|.+|+|++.|++++||...++.+++.+
T Consensus       347 ~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL  426 (459)
T KOG0272|consen  347 EILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL  426 (459)
T ss_pred             ceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhh
Confidence            899999999999999999999999999999999999999999999999999 7899999999999999999999999999


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .||++.|           .++   +.+||+++++|++.|.++++|
T Consensus       427 aGHe~kV-----------~s~---Dis~d~~~i~t~s~DRT~KLW  457 (459)
T KOG0272|consen  427 AGHEGKV-----------ISL---DISPDSQAIATSSFDRTIKLW  457 (459)
T ss_pred             cCCccce-----------EEE---EeccCCceEEEeccCceeeec
Confidence            9999999           999   999999999999999999999

>KOG0291|consensus

Probab=100.00  E-value=1.7e-42  Score=318.49  Aligned_cols=401  Identities=20%  Similarity=0.280  Sum_probs=323.9

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec---cccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .|++++|+  .|.++|++|++|-+.++|+++..+-.....   +...+.++  .+..        +..-+++.+.||.+.
T Consensus       147 di~si~Ws--~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~Vvac--fF~~--------~~~~l~tvskdG~l~  214 (893)
T KOG0291|consen  147 DITSIDWS--DDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVAC--FFGA--------NSLDLYTVSKDGALF  214 (893)
T ss_pred             ceeEEEec--cCCceEEeccccceEEEEEeccccccceEeccCCCcceEEE--Eecc--------CcceEEEEecCceEE
Confidence            48999999  999999999999999999998877655443   56667776  4454        667799999999999


Q ss_pred             eeeccc-----------------------eeh-hhh-----c------CCCcceEEEEEeccccEEEEEeCCceEEEEec
Q psy10942         81 YYETSA-----------------------VKE-LYQ-----H------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRL  125 (537)
Q Consensus        81 ~wd~~~-----------------------~~~-~~~-----~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~  125 (537)
                      +|....                       ++. .++     .      +....|++.+|++.-+.||++-..|...+|.+
T Consensus       215 ~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~Lyel  294 (893)
T KOG0291|consen  215 VWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYEL  294 (893)
T ss_pred             EEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEec
Confidence            997651                       111 000     0      01147999999999999999999999999999


Q ss_pred             ccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhh
Q psy10942        126 NSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAK  205 (537)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~  205 (537)
                      ..           ..+++.+.-....|..++|+ ..+..|++++.. .  |.+                 -+|+.     
T Consensus       295 P~-----------f~lih~LSis~~~I~t~~~N-~tGDWiA~g~~k-l--gQL-----------------lVweW-----  337 (893)
T KOG0291|consen  295 PD-----------FNLIHSLSISDQKILTVSFN-STGDWIAFGCSK-L--GQL-----------------LVWEW-----  337 (893)
T ss_pred             CC-----------ceEEEEeecccceeeEEEec-ccCCEEEEcCCc-c--ceE-----------------EEEEe-----
Confidence            99           89999999888889999999 788889887764 2  558                 88998     


Q ss_pred             hccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC
Q psy10942        206 FKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG  283 (537)
Q Consensus       206 ~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (537)
                        ++...+  ..     +|  ...+.++   +++|||+++|+|+.||.|+  +||...    ..|               
T Consensus       338 --qsEsYVlKQQ-----gH--~~~i~~l---~YSpDgq~iaTG~eDgKVK--vWn~~S----gfC---------------  384 (893)
T KOG0291|consen  338 --QSESYVLKQQ-----GH--SDRITSL---AYSPDGQLIATGAEDGKVK--VWNTQS----GFC---------------  384 (893)
T ss_pred             --eccceeeecc-----cc--ccceeeE---EECCCCcEEEeccCCCcEE--EEeccC----ceE---------------
Confidence              666555  55     99  9999999   9999999999999999999  888877    233               


Q ss_pred             cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE----
Q psy10942        284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL----  359 (537)
Q Consensus       284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----  359 (537)
                                                   ..++..|++.|+.+.|+..++.+++.+-||+|+.||+. .....+++    
T Consensus       385 -----------------------------~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk-RYrNfRTft~P~  434 (893)
T KOG0291|consen  385 -----------------------------FVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK-RYRNFRTFTSPE  434 (893)
T ss_pred             -----------------------------EEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec-ccceeeeecCCC
Confidence                                         33456899999999999999999999999999999998 44444444    


Q ss_pred             -------EecCCCCEEEEEcCCC-cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942        360 -------RGHKKGTQIVSTGADG-LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS  431 (537)
Q Consensus       360 -------~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  431 (537)
                             ...+.|..+++|+.|. .|.+|++++|+.+-.+.+|.+                 +|.+++|+|++..|++++
T Consensus       435 p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEg-----------------PVs~l~f~~~~~~LaS~S  497 (893)
T KOG0291|consen  435 PIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEG-----------------PVSGLSFSPDGSLLASGS  497 (893)
T ss_pred             ceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCC-----------------cceeeEEccccCeEEecc
Confidence                   4445688888888875 699999999999999999998                 788888999999999999


Q ss_pred             CCCcEEEEECCCc-eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc---------ceec
Q psy10942        432 GDATIKLWCLTDY-VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL---------KIRN  501 (537)
Q Consensus       432 ~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------~i~~  501 (537)
                      .|.+|++||+-.. ..+.+++ +...+..++|+|+|+.|++++.||.|.+||...+..+..+.+..+         .++.
T Consensus       498 WDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta  576 (893)
T KOG0291|consen  498 WDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITA  576 (893)
T ss_pred             ccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeeh
Confidence            9999999998653 3444555 667899999999999999999999999999998877766655322         1111


Q ss_pred             cCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      -........+.+   ++|+||.+|++||....|.+|
T Consensus       577 ~~sa~~K~Ftti---~ySaDG~~IlAgG~sn~iCiY  609 (893)
T KOG0291|consen  577 ENSAKGKTFTTI---CYSADGKCILAGGESNSICIY  609 (893)
T ss_pred             hhcccCCceEEE---EEcCCCCEEEecCCcccEEEE
Confidence            111122233556   999999999999999999875

>KOG0272|consensus

Probab=100.00  E-value=3.6e-44  Score=308.14  Aligned_cols=267  Identities=23%  Similarity=0.290  Sum_probs=243.8

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEecc--ccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSV--KRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      ++..++|++-+|.+++|+..+...+.++.+| +.|.++.|+|.  +..||+|+.||++++|++++           ..++
T Consensus       186 ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~-----------e~~l  254 (459)
T KOG0272|consen  186 DSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ-----------ETPL  254 (459)
T ss_pred             CCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC-----------Ccch
Confidence            7799999999999999999999999999977 69999999997  56899999999999999999           6888


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL  220 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~  220 (537)
                      ..+.+|...|..++|+ |++++|++++-+..    -                 ++||+       .+....  ..     
T Consensus       255 ~~l~gH~~RVs~VafH-PsG~~L~TasfD~t----W-----------------RlWD~-------~tk~ElL~QE-----  300 (459)
T KOG0272|consen  255 QDLEGHLARVSRVAFH-PSGKFLGTASFDST----W-----------------RLWDL-------ETKSELLLQE-----  300 (459)
T ss_pred             hhhhcchhhheeeeec-CCCceeeecccccc----h-----------------hhccc-------ccchhhHhhc-----
Confidence            9999999999999999 89999999998888    8                 99999       888777  67     


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      ||  ...|.++   +|.|||.++++|+.|..-+  +||++++                                      
T Consensus       301 GH--s~~v~~i---af~~DGSL~~tGGlD~~~R--vWDlRtg--------------------------------------  335 (459)
T KOG0272|consen  301 GH--SKGVFSI---AFQPDGSLAATGGLDSLGR--VWDLRTG--------------------------------------  335 (459)
T ss_pred             cc--cccccee---EecCCCceeeccCccchhh--eeecccC--------------------------------------
Confidence            99  9999999   9999999999999998888  8887773                                      


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                           ..     ...+.+|..+|.+++|+|+|..|++|+.|++++|||++ ....+..+..|.+                
T Consensus       336 -----r~-----im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR-~r~~ly~ipAH~n----------------  388 (459)
T KOG0272|consen  336 -----RC-----IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR-MRSELYTIPAHSN----------------  388 (459)
T ss_pred             -----cE-----EEEecccccceeeEeECCCceEEeecCCCCcEEEeeec-ccccceecccccc----------------
Confidence                 22     23356789999999999999999999999999999999 6666777777766                


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR  459 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~  459 (537)
                                                       -|+.+.|+| .|.+|++++.|++++||...+++++.++.||.+.|.+
T Consensus       389 ---------------------------------lVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s  435 (459)
T KOG0272|consen  389 ---------------------------------LVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVIS  435 (459)
T ss_pred             ---------------------------------hhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEE
Confidence                                             777888888 6899999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEE
Q psy10942        460 CHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       460 ~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      +..++|+.++++++.|.++++|.
T Consensus       436 ~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  436 LDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             EEeccCCceEEEeccCceeeecc
Confidence            99999999999999999999995

>KOG0318|consensus

Probab=100.00  E-value=4.8e-41  Score=296.73  Aligned_cols=441  Identities=11%  Similarity=0.069  Sum_probs=325.7

Q ss_pred             eeeeeeeeccCCcceEEEecC--cceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGR--DKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~--~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .|..|+|+  .|+++|++.|+  ++..+++-.++|.-+..+. +...+.++.|  -|.       ..-.++++++|+.|.
T Consensus       105 ~I~Di~Wd--~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~--Kps-------RPfRi~T~sdDn~v~  173 (603)
T KOG0318|consen  105 PIKDISWD--FDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDF--KPS-------RPFRIATGSDDNTVA  173 (603)
T ss_pred             ccccceeC--CCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeec--cCC-------CceEEEeccCCCeEE
Confidence            57788999  89988888755  3334444344666677666 4455666744  553       446799999999999


Q ss_pred             eeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee---cchhhhhhhh
Q psy10942         81 YYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV---GFSDEILDIA  156 (537)
Q Consensus        81 ~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~  156 (537)
                      +|+=..-+--.++..| .-|.++.|||||+++|+++.||.+.+||=.+           ++.+..+.   +|.+.|.+++
T Consensus       174 ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGkt-----------ge~vg~l~~~~aHkGsIfals  242 (603)
T KOG0318|consen  174 FFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKT-----------GEKVGELEDSDAHKGSIFALS  242 (603)
T ss_pred             EeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCC-----------ccEEEEecCCCCccccEEEEE
Confidence            9998777777777655 5899999999999999999999999999999           68888887   8999999999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhh---h--c------------------------
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAK---F--K------------------------  207 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~---~--~------------------------  207 (537)
                      |+ ||+.++++++++..    +                 ++||+....-   +  .                        
T Consensus       243 Ws-PDs~~~~T~SaDkt----~-----------------KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G  300 (603)
T KOG0318|consen  243 WS-PDSTQFLTVSADKT----I-----------------KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSG  300 (603)
T ss_pred             EC-CCCceEEEecCCce----E-----------------EEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCc
Confidence            99 89999999999988    7                 7776611100   0  0                        


Q ss_pred             -------ccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc--ccccccceee
Q psy10942        208 -------QSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG--IFVPEAEHGA  278 (537)
Q Consensus       208 -------~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~--~~~~~~~~~~  278 (537)
                             .....   ...+.||  ...|+++   ..+|++++|++|+.||.|.  -|+...+......  .....+..+.
T Consensus       301 ~in~ln~~d~~~---~~~i~GH--nK~ITaL---tv~~d~~~i~SgsyDG~I~--~W~~~~g~~~~~~g~~h~nqI~~~~  370 (603)
T KOG0318|consen  301 TINYLNPSDPSV---LKVISGH--NKSITAL---TVSPDGKTIYSGSYDGHIN--SWDSGSGTSDRLAGKGHTNQIKGMA  370 (603)
T ss_pred             EEEEecccCCCh---hheeccc--ccceeEE---EEcCCCCEEEeeccCceEE--EEecCCccccccccccccceEEEEe
Confidence                   00000   1113499  9999999   9999999999999999999  9999885422110  0000011111


Q ss_pred             eeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-----Cc
Q psy10942        279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG-----GL  353 (537)
Q Consensus       279 ~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~-----~~  353 (537)
                      .+.   -..+++.+.|.++++.++.........   .. .......+++..+++..++..+.++.+.+=|...     ..
T Consensus       371 ~~~---~~~~~t~g~Dd~l~~~~~~~~~~t~~~---~~-~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~  443 (603)
T KOG0318|consen  371 ASE---SGELFTIGWDDTLRVISLKDNGYTKSE---VV-KLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIG  443 (603)
T ss_pred             ecC---CCcEEEEecCCeEEEEecccCcccccc---ee-ecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccc
Confidence            111   157889999999999988655431110   01 1122334888998988888877766544443431     12


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee--eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS--TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS  431 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  431 (537)
                      -.......++++..++.|+.|+++++|.+.......  ....|..                 .|++++||||+.|||++.
T Consensus       444 y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a-----------------~iT~vaySpd~~yla~~D  506 (603)
T KOG0318|consen  444 YESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRA-----------------AITDVAYSPDGAYLAAGD  506 (603)
T ss_pred             cccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccC-----------------CceEEEECCCCcEEEEec
Confidence            223456678899999999999999999998765432  3344544                 889999999999999999


Q ss_pred             CCCcEEEEECCCceeee-EeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee-EEEecCCccceeccCCCCCCc
Q psy10942        432 GDATIKLWCLTDYVCLK-SLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC-VSTFDKHALKIRNSDSENDHK  509 (537)
Q Consensus       432 ~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~  509 (537)
                      ..+.+.+||..+.+... ...-|...|++++|+|+..++|+|+.|..|.||+++.... +.....|...|          
T Consensus       507 a~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gV----------  576 (603)
T KOG0318|consen  507 ASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGV----------  576 (603)
T ss_pred             cCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCc----------
Confidence            99999999999877643 3344999999999999999999999999999999987543 34445687778          


Q ss_pred             cccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        510 GFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       510 ~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                       +.+   .|- |...|++.+.|-.|++|
T Consensus       577 -n~v---~wl-de~tvvSsG~Da~iK~W  599 (603)
T KOG0318|consen  577 -NSV---AWL-DESTVVSSGQDANIKVW  599 (603)
T ss_pred             -eeE---EEe-cCceEEeccCcceeEEe
Confidence             888   885 45678899999999999

>KOG1408|consensus

Probab=100.00  E-value=1.4e-41  Score=310.59  Aligned_cols=468  Identities=14%  Similarity=0.200  Sum_probs=348.5

Q ss_pred             eeeeeeeeccCCcceEEEe--cCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCc--cce
Q psy10942          4 CVTCFDVIPQITSEFSVHC--GRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGE--KSL   78 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~--~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (537)
                      .++|++||  ++|+|+++|  |....+++|+++.-..+..+. +.-.++++  .++|        ..+|+++.|.  |-.
T Consensus        80 ~~t~vAfS--~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcv--aFsp--------~~kyvvSVGsQHDMI  147 (1080)
T KOG1408|consen   80 PLTCVAFS--QNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCV--AFSP--------GNKYVVSVGSQHDMI  147 (1080)
T ss_pred             ceeEEEEc--CCCcEEEecccCCCccceeeeeccccchhhhhhccccceee--eecC--------CCcEEEeeccccceE
Confidence            68999999  999999999  588889999999888777665 56677777  4588        6688887764  557


Q ss_pred             EEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccc------ccccccceeE---------
Q psy10942         79 LHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEE------RPNKILKFRK---------  143 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~------~~~~~~~~~~---------  143 (537)
                      |.+||+..+.....-+....|.+++|+.||.|+++++. .+|++|.++.+..-..      .....+++..         
T Consensus       148 Vnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gn-rHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg  226 (1080)
T KOG1408|consen  148 VNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGN-RHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACG  226 (1080)
T ss_pred             EEhhhhhhcccccccccceeEEEEEEccCCceeeeeee-eeEEEEEeeccccccCCccccchhhhccccccchhhhhhhc
Confidence            89999998888888788889999999999999999876 7899999987531100      0000000000         


Q ss_pred             -----------Eeecc-----------------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhH
Q psy10942        144 -----------QFVGF-----------------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFD  195 (537)
Q Consensus       144 -----------~~~~~-----------------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  195 (537)
                                 +-.||                 +....|++.+   ..+++.++.++.    |                 
T Consensus       227 ~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs---~r~I~cgCa~g~----v-----------------  282 (1080)
T KOG1408|consen  227 VGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVS---SRLIACGCAKGM----V-----------------  282 (1080)
T ss_pred             CcccccceEEEecccceeeechhhhhhhhhhhhccccceeeee---cceEEEeeccce----e-----------------
Confidence                       00011                 0112344444   667777777766    7                 


Q ss_pred             HHHHHHHHhhhccccccc--cccc-------------------ccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        196 KTFERILEAKFKQSSSQQ--KHNT-------------------ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       196 ~~wd~~~~~~~~~~~~~~--l~~~-------------------~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                      ++|+.       .+....  ++..                   .-.+.  -....++   .|++....|.....|..+. 
T Consensus       283 rlFnp-------~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~--fPD~IA~---~Fdet~~klscVYndhSlY-  349 (1080)
T KOG1408|consen  283 RLFNP-------ETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAI--FPDAIAC---QFDETTDKLSCVYNDHSLY-  349 (1080)
T ss_pred             eecCc-------chhhhccccccccccccchhhcccccccccccCccc--CCceeEE---EecCCCceEEEEEcCceEE-
Confidence            77765       221111  1100                   00011  1223445   6899999999999999999 


Q ss_pred             ccccccCCCccccccc---------ccccceeeeeeC--Ccc--eEEEEEeCCCeEEEEECCCCceee----eeecc---
Q psy10942        255 ELEKRKTYHFPLFGIF---------VPEAEHGAFYTG--GTV--ELLASGSLDKTVKVWSTTGGLKLL----NVLRG---  314 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~---------~~~~~~~~~~~~--~~v--~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~---  314 (537)
                       +||+++.....++..         ..+......|..  .++  ..+++++.|++|++|++.....-.    +++..   
T Consensus       350 -vWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~  428 (1080)
T KOG1408|consen  350 -VWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLS  428 (1080)
T ss_pred             -EEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhh
Confidence             999998665544411         111111111211  122  679999999999999997622110    00000   


Q ss_pred             -------------------------cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-----
Q psy10942        315 -------------------------HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----  364 (537)
Q Consensus       315 -------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----  364 (537)
                                               ..-.....+++++.+|+|++|++|..-|++++|++. .......+..|..     
T Consensus       429 ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq-~l~~~~~~eAHesEilcL  507 (1080)
T KOG1408|consen  429 KIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQ-ELEYTCFMEAHESEILCL  507 (1080)
T ss_pred             cCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEeh-hhhhhhheecccceeEEE
Confidence                                     001224568999999999999999999999999998 6666666666653     


Q ss_pred             --------CCEEEEEcCCCcEEEEECCCC-eeeeeeccCCcceEEEEEecCC--CceEEe--------------------
Q psy10942        365 --------GTQIVSTGADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDE--NQIITG--------------------  413 (537)
Q Consensus       365 --------~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~--~~~~~~--------------------  413 (537)
                              .++|++++.|.-|++||+... .++.++.+|+..|+++.|.-.+  .++++.                    
T Consensus       508 eyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f  587 (1080)
T KOG1408|consen  508 EYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLF  587 (1080)
T ss_pred             eecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceec
Confidence                    578899999999999999755 5678899999999999998877  333321                    


Q ss_pred             ----------eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        414 ----------GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       414 ----------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                                .++.|+..|..+++++++.|..|+|||+.+++....|++   |.+....+...|.|.|||+.+.|.++.+
T Consensus       588 ~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~  667 (1080)
T KOG1408|consen  588 PRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCF  667 (1080)
T ss_pred             cccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEE
Confidence                      488999999999999999999999999999999999976   5677888999999999999999999999


Q ss_pred             EECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        481 WSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       481 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|+.+|+++.+..+|...|           +.+   .|++|-+.|++++.||.|.||
T Consensus       668 ~Df~sgEcvA~m~GHsE~V-----------TG~---kF~nDCkHlISvsgDgCIFvW  710 (1080)
T KOG1408|consen  668 VDFVSGECVAQMTGHSEAV-----------TGV---KFLNDCKHLISVSGDGCIFVW  710 (1080)
T ss_pred             EEeccchhhhhhcCcchhe-----------eee---eecccchhheeecCCceEEEE
Confidence            9999999999999999999           999   999999999999999999999

>KOG0306|consensus

Probab=100.00  E-value=2.8e-40  Score=303.87  Aligned_cols=396  Identities=19%  Similarity=0.279  Sum_probs=329.0

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhc---CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQH---GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      ++++++... -..|.+||+.+|+....+   +....|+++.-+||.-.||+|..||.|+||+..+           ....
T Consensus        33 ~Gr~va~~a-~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s-----------~~~~  100 (888)
T KOG0306|consen   33 KGRAVAVSA-LEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLES-----------EEIL  100 (888)
T ss_pred             CCcEEEEec-cccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCC-----------Ccee
Confidence            356666533 345999999999544333   3335899999999999999999999999999998           6778


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccC
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGR  222 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h  222 (537)
                      -++.||...|+.+.|. ..+..|++++.+.+    |                 .+||+.     .+.+...++     ||
T Consensus       101 ~tfngHK~AVt~l~fd-~~G~rlaSGskDt~----I-----------------IvwDlV-----~E~Gl~rL~-----GH  148 (888)
T KOG0306|consen  101 ITFNGHKAAVTTLKFD-KIGTRLASGSKDTD----I-----------------IVWDLV-----GEEGLFRLR-----GH  148 (888)
T ss_pred             eeecccccceEEEEEc-ccCceEeecCCCcc----E-----------------EEEEec-----cceeeEEee-----cc
Confidence            8999999999999999 88899999998888    9                 999992     244444488     99


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCCCe
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLDKT  296 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d~~  296 (537)
                        ...|+.+   -|..+.+++++.+.|+.++  +||+.+    ..|     ..+...|..  ..+    +.+++++.|+.
T Consensus       149 --kd~iT~~---~F~~~~~~lvS~sKDs~iK--~WdL~t----qhC-----f~Thvd~r~Eiw~l~~~~~~lvt~~~dse  212 (888)
T KOG0306|consen  149 --KDSITQA---LFLNGDSFLVSVSKDSMIK--FWDLET----QHC-----FETHVDHRGEIWALVLDEKLLVTAGTDSE  212 (888)
T ss_pred             --hHHHhHH---hccCCCeEEEEeccCceEE--EEeccc----cee-----eeEEecccceEEEEEEecceEEEEecCCc
Confidence              9999999   8888889999999999999  999998    334     333333333  111    45666666667


Q ss_pred             EEEEEC--------------------------------------------------------------------------
Q psy10942        297 VKVWST--------------------------------------------------------------------------  302 (537)
Q Consensus       297 i~i~~~--------------------------------------------------------------------------  302 (537)
                      +++|++                                                                          
T Consensus       213 ~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kk  292 (888)
T KOG0306|consen  213 LKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKK  292 (888)
T ss_pred             eEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhh
Confidence            777766                                                                          


Q ss_pred             -----------------------------------------------------------CCCcee----eeeeccccccc
Q psy10942        303 -----------------------------------------------------------TGGLKL----LNVLRGHKKGH  319 (537)
Q Consensus       303 -----------------------------------------------------------~~~~~~----~~~~~~~~~~~  319 (537)
                                                                                 +.....    .+.......+|
T Consensus       293 ka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GH  372 (888)
T KOG0306|consen  293 KAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGH  372 (888)
T ss_pred             hccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccc
Confidence                                                                       110000    00000123578


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe--------cCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG--------HKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      ...|.+++++.+...+++|+ .+.+++|+.. ..++++++..        -|.+.+++.|...|.+.+||+.+...+.++
T Consensus       373 R~dVRsl~vS~d~~~~~Sga-~~SikiWn~~-t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti  450 (888)
T KOG0306|consen  373 RSDVRSLCVSSDSILLASGA-GESIKIWNRD-TLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETI  450 (888)
T ss_pred             hhheeEEEeecCceeeeecC-CCcEEEEEcc-CcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhh
Confidence            88899999998877777664 5789999998 7777777654        356889999999999999999999999999


Q ss_pred             ccCCcceEEEEEecCCCceEEe-------------------------------------eeeEEEEcCCCCEEEEEeCCC
Q psy10942        392 DKHALKIWTLAITKDENQIITG-------------------------------------GVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~-------------------------------------~i~~~~~s~~~~~l~~~~~dg  434 (537)
                      +.|.+.+++++.+|++..++++                                     .+.++.+||||++||++--|.
T Consensus       451 ~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdn  530 (888)
T KOG0306|consen  451 RAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDN  530 (888)
T ss_pred             hccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccC
Confidence            9999999999999999988876                                     388999999999999999999


Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      ++++|-+.+.+....+-||.-||.+|..|||+++++|||.|..|+||-++-|.+-+.+-+|.+.|           .++ 
T Consensus       531 TVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSv-----------m~V-  598 (888)
T KOG0306|consen  531 TVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSV-----------MSV-  598 (888)
T ss_pred             eEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCce-----------eEE-
Confidence            99999999999999999999999999999999999999999999999999999999999999999           999 


Q ss_pred             ceeeecCCCEEEEEeCCCCEEeC
Q psy10942        515 RQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                        .|-|....++++|.|+.|+-|
T Consensus       599 --~F~P~~~~FFt~gKD~kvKqW  619 (888)
T KOG0306|consen  599 --QFLPKTHLFFTCGKDGKVKQW  619 (888)
T ss_pred             --EEcccceeEEEecCcceEEee
Confidence              999999999999999999988

>KOG0286|consensus

Probab=100.00  E-value=2.9e-40  Score=270.79  Aligned_cols=286  Identities=18%  Similarity=0.242  Sum_probs=247.7

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      .+..++++||.+.|.++.|+ +|.+++++++.++.    +                 .+||.       -+...+  ++ 
T Consensus        45 ~~~rr~LkGH~~Ki~~~~ws-~Dsr~ivSaSqDGk----l-----------------IvWDs-------~TtnK~haip-   94 (343)
T KOG0286|consen   45 MRTRRTLKGHLNKIYAMDWS-TDSRRIVSASQDGK----L-----------------IVWDS-------FTTNKVHAIP-   94 (343)
T ss_pred             eeeEEEecccccceeeeEec-CCcCeEEeeccCCe----E-----------------EEEEc-------ccccceeEEe-
Confidence            44568999999999999999 89999999988877    9                 99998       555444  44 


Q ss_pred             cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-----eEEE
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-----ELLA  289 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-----~~l~  289 (537)
                          -.  ...|...   +|+|.|+++|+|+.|....  ++++.........   +..+.+.+|+.  .+.     ..|+
T Consensus        95 ----l~--s~WVMtC---A~sPSg~~VAcGGLdN~Cs--iy~ls~~d~~g~~---~v~r~l~gHtgylScC~f~dD~~il  160 (343)
T KOG0286|consen   95 ----LP--SSWVMTC---AYSPSGNFVACGGLDNKCS--IYPLSTRDAEGNV---RVSRELAGHTGYLSCCRFLDDNHIL  160 (343)
T ss_pred             ----cC--ceeEEEE---EECCCCCeEEecCcCceeE--EEecccccccccc---eeeeeecCccceeEEEEEcCCCceE
Confidence                44  8899999   9999999999999999999  9999864222111   11566778877  222     7899


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI  368 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l  368 (537)
                      +++.|.+..+||+++++.     ...+.+|.+.|.++.++| +++.+++|+-|+..++||++ .....+.+.+|..    
T Consensus       161 T~SGD~TCalWDie~g~~-----~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R-~~~c~qtF~ghes----  230 (343)
T KOG0286|consen  161 TGSGDMTCALWDIETGQQ-----TQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVR-SGQCVQTFEGHES----  230 (343)
T ss_pred             ecCCCceEEEEEcccceE-----EEEecCCcccEEEEecCCCCCCeEEecccccceeeeecc-CcceeEeeccccc----
Confidence            999999999999999987     456689999999999999 99999999999999999998 5566666666654    


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK  448 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~  448 (537)
                                                                   .|++++|.|+|.-+++|+.|++.++||++..+.+.
T Consensus       231 ---------------------------------------------DINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a  265 (343)
T KOG0286|consen  231 ---------------------------------------------DINSVRFFPSGDAFATGSDDATCRLYDLRADQELA  265 (343)
T ss_pred             ---------------------------------------------ccceEEEccCCCeeeecCCCceeEEEeecCCcEEe
Confidence                                                         88899999999999999999999999999988888


Q ss_pred             EeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        449 SLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       449 ~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      .+...  ..+|++++||..|++|++|..|.++.+||.-.++.+..+.+|.+.|           +++   ..+|||--|+
T Consensus       266 ~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRv-----------Scl---~~s~DG~av~  331 (343)
T KOG0286|consen  266 VYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRV-----------SCL---GVSPDGMAVA  331 (343)
T ss_pred             eeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCee-----------EEE---EECCCCcEEE
Confidence            88732  3579999999999999999999999999999999999999999999           999   9999999999


Q ss_pred             EEeCCCCEEeC
Q psy10942        527 RGGWSPQVVVY  537 (537)
Q Consensus       527 s~~~dg~i~vW  537 (537)
                      ||++|..+|||
T Consensus       332 TgSWDs~lriW  342 (343)
T KOG0286|consen  332 TGSWDSTLRIW  342 (343)
T ss_pred             ecchhHheeec
Confidence            99999999999

>KOG0286|consensus

Probab=100.00  E-value=8e-40  Score=268.23  Aligned_cols=290  Identities=19%  Similarity=0.261  Sum_probs=246.7

Q ss_pred             eeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942         40 RSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTAD  117 (537)
Q Consensus        40 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d  117 (537)
                      +.++ +...+.++  -+.+        +.+++++++.||.+.|||.-+...++.+..+ .+|..+||+|.|+++|+|+-|
T Consensus        49 r~LkGH~~Ki~~~--~ws~--------Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd  118 (343)
T KOG0286|consen   49 RTLKGHLNKIYAM--DWST--------DSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD  118 (343)
T ss_pred             EEecccccceeee--EecC--------CcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC
Confidence            3444 44556666  5677        7899999999999999999998888888866 699999999999999999999


Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      +...||++.+...     ....+..+.+.+|.+.+.++.|. + +.+|++++++..    .                 .+
T Consensus       119 N~Csiy~ls~~d~-----~g~~~v~r~l~gHtgylScC~f~-d-D~~ilT~SGD~T----C-----------------al  170 (343)
T KOG0286|consen  119 NKCSIYPLSTRDA-----EGNVRVSRELAGHTGYLSCCRFL-D-DNHILTGSGDMT----C-----------------AL  170 (343)
T ss_pred             ceeEEEecccccc-----cccceeeeeecCccceeEEEEEc-C-CCceEecCCCce----E-----------------EE
Confidence            9999999986311     11235677899999999999997 3 778889998888    8                 89


Q ss_pred             HHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEA  274 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~  274 (537)
                      ||+       ++++..  +.     ||  .+.|.++   +++| +++.+++|+-|+..+  +||++.+            
T Consensus       171 WDi-------e~g~~~~~f~-----GH--~gDV~sl---sl~p~~~ntFvSg~cD~~ak--lWD~R~~------------  219 (343)
T KOG0286|consen  171 WDI-------ETGQQTQVFH-----GH--TGDVMSL---SLSPSDGNTFVSGGCDKSAK--LWDVRSG------------  219 (343)
T ss_pred             EEc-------ccceEEEEec-----CC--cccEEEE---ecCCCCCCeEEeccccccee--eeeccCc------------
Confidence            999       988877  88     99  9999999   9999 888999888888888  7777762            


Q ss_pred             ceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce
Q psy10942        275 EHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK  354 (537)
Q Consensus       275 ~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  354 (537)
                                                     ..     .+.+.+|...|+++.|.|+|.-+++|+.|++.++||++ ..+
T Consensus       220 -------------------------------~c-----~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlR-aD~  262 (343)
T KOG0286|consen  220 -------------------------------QC-----VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLR-ADQ  262 (343)
T ss_pred             -------------------------------ce-----eEeecccccccceEEEccCCCeeeecCCCceeEEEeec-CCc
Confidence                                           22     45678999999999999999999999999999999999 444


Q ss_pred             eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942        355 LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       355 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  434 (537)
                      .+..+...+.                                               ..+|++++||..|++|++|..|.
T Consensus       263 ~~a~ys~~~~-----------------------------------------------~~gitSv~FS~SGRlLfagy~d~  295 (343)
T KOG0286|consen  263 ELAVYSHDSI-----------------------------------------------ICGITSVAFSKSGRLLFAGYDDF  295 (343)
T ss_pred             EEeeeccCcc-----------------------------------------------cCCceeEEEcccccEEEeeecCC
Confidence            4443331111                                               11899999999999999999999


Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      .+.+||.-.++.+..+.+|.+.|.++..+|||.-+++|+.|.++|||.
T Consensus       296 ~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  296 TCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999999999999999999999999999999999999999994

>KOG0315|consensus

Probab=100.00  E-value=6.2e-39  Score=256.97  Aligned_cols=292  Identities=17%  Similarity=0.236  Sum_probs=247.1

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCc-ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSS-PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      ..-+|+++|.|.+|++|...+|.+.+++++.+ .|..+...||++.||+++. ..||+||+.+..         ..++.+
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~n---------p~Pv~t   78 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNN---------PNPVAT   78 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCC---------CCceeE
Confidence            44689999999999999999999999999884 9999999999999999887 679999999852         347889


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRD  223 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~  223 (537)
                      +.+|...|.++.|. .+++.+++++.++.    +                 +|||+       +...++ ..     .| 
T Consensus        79 ~e~h~kNVtaVgF~-~dgrWMyTgseDgt----~-----------------kIWdl-------R~~~~qR~~-----~~-  123 (311)
T KOG0315|consen   79 FEGHTKNVTAVGFQ-CDGRWMYTGSEDGT----V-----------------KIWDL-------RSLSCQRNY-----QH-  123 (311)
T ss_pred             EeccCCceEEEEEe-ecCeEEEecCCCce----E-----------------EEEec-------cCcccchhc-----cC-
Confidence            99999999999999 88999988888777    9                 99999       887777 55     68 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                       ..+|.++   ..+|+...|++|..+|.|+  +||+....    |                                   
T Consensus       124 -~spVn~v---vlhpnQteLis~dqsg~ir--vWDl~~~~----c-----------------------------------  158 (311)
T KOG0315|consen  124 -NSPVNTV---VLHPNQTELISGDQSGNIR--VWDLGENS----C-----------------------------------  158 (311)
T ss_pred             -CCCcceE---EecCCcceEEeecCCCcEE--EEEccCCc----c-----------------------------------
Confidence             8999999   9999998899998888888  88887621    1                                   


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                      +        ......-...|.++...|||.+++.+...|..++|++-. ....                          .
T Consensus       159 ~--------~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~-~~~~--------------------------s  203 (311)
T KOG0315|consen  159 T--------HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLN-HQTA--------------------------S  203 (311)
T ss_pred             c--------cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccC-CCcc--------------------------c
Confidence            0        111223346789999999999999999999999999973 1111                          1


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcceEEEEE
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-VCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~  462 (537)
                      ..+++.+++.|..                 .+..+.+|||+++||+++.|.+++||+..+. +.-..+++|...+..++|
T Consensus       204 ~l~P~~k~~ah~~-----------------~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~F  266 (311)
T KOG0315|consen  204 ELEPVHKFQAHNG-----------------HILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAF  266 (311)
T ss_pred             cceEhhheecccc-----------------eEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeee
Confidence            1234444555554                 7888899999999999999999999999987 667788999999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      |.||.||++++.|+.+++|++..++.++.+.+|....
T Consensus       267 S~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~  303 (311)
T KOG0315|consen  267 SADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAA  303 (311)
T ss_pred             ccCccEEEecCCCCceeecccccCceeeecCCccccc
Confidence            9999999999999999999999999999999998765

>KOG0276|consensus

Probab=100.00  E-value=9.2e-38  Score=281.50  Aligned_cols=426  Identities=12%  Similarity=0.144  Sum_probs=318.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|-|++|+  |...+++++--+|.|.|||.++..+++.+. ...|+.++  .+.+        .++.+++|+.|..|++
T Consensus        14 dRVKsVd~H--PtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~--kfia--------RknWiv~GsDD~~IrV   81 (794)
T KOG0276|consen   14 DRVKSVDFH--PTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAA--KFIA--------RKNWIVTGSDDMQIRV   81 (794)
T ss_pred             CceeeeecC--CCCceEEEeeecCeeEEEecccceeeeeeeecccchhhh--eeee--------ccceEEEecCCceEEE
Confidence            468999999  778899999999999999999999999988 56688888  4466        5579999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      |+..+++.+..+..| +.|.+++.+|...++.+++.|-.|++||.+..          ..+.++++||+..|.+++|+|.
T Consensus        82 fnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~----------wa~~qtfeGH~HyVMqv~fnPk  151 (794)
T KOG0276|consen   82 FNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE----------WACEQTFEGHEHYVMQVAFNPK  151 (794)
T ss_pred             EecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc----------eeeeeEEcCcceEEEEEEecCC
Confidence            999999999999966 79999999999999999999999999999986          7889999999999999999999


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      |.+.+++++-++.    |                 ++|++       .+..+.  +.     ||  ...|.|+   .|-+
T Consensus       152 D~ntFaS~sLDrT----V-----------------KVWsl-------gs~~~nfTl~-----gH--ekGVN~V---dyy~  193 (794)
T KOG0276|consen  152 DPNTFASASLDRT----V-----------------KVWSL-------GSPHPNFTLE-----GH--EKGVNCV---DYYT  193 (794)
T ss_pred             Cccceeeeecccc----E-----------------EEEEc-------CCCCCceeee-----cc--ccCcceE---Eecc
Confidence            9999999999888    9                 99999       666666  77     99  9999999   8887


Q ss_pred             CC--CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--------CcceEEEEEeCCCeEEEEECCCCcee
Q psy10942        239 EE--DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--------GTVELLASGSLDKTVKVWSTTGGLKL  308 (537)
Q Consensus       239 ~~--~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~l~~~~~d~~i~i~~~~~~~~~  308 (537)
                      .|  .+|++|+.|.+++  +||.++    ..|     ++++.+|..        ..+..+++|++||++++|+..+-+. 
T Consensus       194 ~gdkpylIsgaDD~tiK--vWDyQt----k~C-----V~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~l-  261 (794)
T KOG0276|consen  194 GGDKPYLISGADDLTIK--VWDYQT----KSC-----VQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKL-  261 (794)
T ss_pred             CCCcceEEecCCCceEE--Eeecch----HHH-----HHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceeh-
Confidence            55  6999999999999  999998    677     888999987        2228999999999999999988764 


Q ss_pred             eeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC-CcEEEE------E
Q psy10942        309 LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD-GLLKLW------S  381 (537)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d-~~i~i~------d  381 (537)
                          ...+.-....+.|++-.+.++.+++|.++|.|.+ .+. ...+...+.  ..|+.+-+...+ -.+.+-      +
T Consensus       262 ----E~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v-~lg-reeP~vsMd--~~gKIiwa~~~ei~~~~~ks~~~~~e  333 (794)
T KOG0276|consen  262 ----EKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV-KLG-REEPAVSMD--SNGKIIWAVHSEIQAVNLKSVGAQKE  333 (794)
T ss_pred             ----hhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE-Ecc-CCCCceeec--CCccEEEEcCceeeeeeceeccCccc
Confidence                4445556678999999999999999988886654 454 334433333  333333322211 001110      2


Q ss_pred             CCCCeeee----eeccCCcceEEEEEecCCCceEEe-------------------eeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        382 IKTSTCVS----TFDKHALKIWTLAITKDENQIITG-------------------GVWFVNFSPLDRILISSSGDATIKL  438 (537)
Q Consensus       382 ~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~-------------------~i~~~~~s~~~~~l~~~~~dg~i~i  438 (537)
                      +..++.+.    .+-.-.-....++.+|+|+.++.+                   ......|++|.+..++--.++.|++
T Consensus       334 v~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~VcgdGEyiIyTala~RnK~fG~~~eFvw~~dsne~avRes~~~vki  413 (794)
T KOG0276|consen  334 VTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVCGDGEYIIYTALALRNKAFGSGLEFVWAADSNEFAVRESNGNVKI  413 (794)
T ss_pred             ccCCccccchhhhccccccchHHhccCCCCcEEEEecCccEEEEEeeehhhcccccceeEEEcCCCCeEEEEecCCceEE
Confidence            23333221    111111122345566666554432                   2444556666556666555666766


Q ss_pred             EECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceee
Q psy10942        439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC  518 (537)
Q Consensus       439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  518 (537)
                      +  ++++....+.....    +..--.|.+|... .++.+++||-+++++++.+......+                 .|
T Consensus       414 ~--knfke~ksi~~~~~----~e~i~gg~Llg~~-ss~~~~fydW~~~~lVrrI~v~~k~v-----------------~w  469 (794)
T KOG0276|consen  414 F--KNFKEHKSIRPDMS----AEGIFGGPLLGVR-SSDFLCFYDWESGELVRRIEVTSKHV-----------------YW  469 (794)
T ss_pred             E--ecceeccccccccc----eeeecCCceEEEE-eCCeEEEEEcccceEEEEEeecccee-----------------EE
Confidence            6  45555444442111    1111234445544 45679999999999999987655544                 99


Q ss_pred             ecCCCEEEEEeCCC
Q psy10942        519 SRNSDCEYRGGWSP  532 (537)
Q Consensus       519 s~~~~~l~s~~~dg  532 (537)
                      +.+|.+++.+++|.
T Consensus       470 ~d~g~lVai~~d~S  483 (794)
T KOG0276|consen  470 SDNGELVAIAGDDS  483 (794)
T ss_pred             ecCCCEEEEEecCc
Confidence            99999999988775

>KOG1539|consensus

Probab=100.00  E-value=9.7e-38  Score=290.54  Aligned_cols=428  Identities=13%  Similarity=0.134  Sum_probs=332.0

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeecccc-ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYE-SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL   95 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~   95 (537)
                      +-++.|+..|.+.+|++++++.+++++... .|+++  .-.|        --..++.|..+|.|.++++..++.+.+++.
T Consensus       173 NKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~i--eqsP--------aLDVVaiG~~~G~ViifNlK~dkil~sFk~  242 (910)
T KOG1539|consen  173 NKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAI--EQSP--------ALDVVAIGLENGTVIIFNLKFDKILMSFKQ  242 (910)
T ss_pred             eeEEEeecCCcEEEEEeccCcEEEEecccccceeEe--ccCC--------cceEEEEeccCceEEEEEcccCcEEEEEEc
Confidence            568889999999999999999999998544 45555  5566        456899999999999999999999999998


Q ss_pred             C-cceEEEEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEee-cchhhhhhhhcccCCCccEEEeeecc
Q psy10942         96 S-SPLVRIVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        96 ~-~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      . +.|++++|.-||.. +|+++..|.+.+||++.           .+.+..++ .|.+.|....|. ++...+++++.|.
T Consensus       243 d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~-----------kkl~~v~~nah~~sv~~~~fl-~~epVl~ta~~Dn  310 (910)
T KOG1539|consen  243 DWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEK-----------KKLINVTRNAHYGSVTGATFL-PGEPVLVTAGADN  310 (910)
T ss_pred             cccceeEEEeccCCCeeEEeccCCceEEEEEcCC-----------CeeeeeeeccccCCcccceec-CCCceEeeccCCC
Confidence            7 89999999999986 67777779999999998           55555555 788889999998 6667777777776


Q ss_pred             ccCCcccceeecccCCCcchhhHHHH--HHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc-cCCCeeeeccC
Q psy10942        173 LNGGDLSGLVKLGANRSHNEWFDKTF--ERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV-KEEDLFPRQSM  248 (537)
Q Consensus       173 ~~~~~i~~~~~~~~~~~~~~~~~~~w--d~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s-~~~~~l~~~~~  248 (537)
                      .    +                 ++|  |.       ..+... +.  ...||  ..+..|+   .|. .+|..+.+++.
T Consensus       311 S----l-----------------k~~vfD~-------~dg~pR~LR--~R~GH--s~Pp~~i---rfy~~~g~~ilsa~~  355 (910)
T KOG1539|consen  311 S----L-----------------KVWVFDS-------GDGVPRLLR--SRGGH--SAPPSCI---RFYGSQGHFILSAKQ  355 (910)
T ss_pred             c----e-----------------eEEEeeC-------CCCcchhee--eccCC--CCCchhe---eeeccCcEEEEeccc
Confidence            6    5                 555  43       233222 21  22399  9999999   887 78899999999


Q ss_pred             CCcceeccccccCCCccccccc-------------------ccccceeeeeeCC---cceEEEEEeCCCeEEEEECCCCc
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIF-------------------VPEAEHGAFYTGG---TVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~---~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      |++.+  .+.+....+......                   .+++..+......   -.+.+...-.+...+.|+.+...
T Consensus       356 Drt~r--~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~  433 (910)
T KOG1539|consen  356 DRTLR--SFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKT  433 (910)
T ss_pred             Ccchh--hhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcc
Confidence            99998  877655322111100                   0111111111110   00556666677889999998765


Q ss_pred             eeee-eecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-------------EecCCCCEEEEEc
Q psy10942        307 KLLN-VLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-------------RGHKKGTQIVSTG  372 (537)
Q Consensus       307 ~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------~~~~~~~~l~~~~  372 (537)
                      .-.- +....++.-...+++++.++.|++.+.|+..|.|-+|++. .+-....+             .....++.+++++
T Consensus       434 ~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQ-SGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~  512 (910)
T KOG1539|consen  434 SGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQ-SGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAG  512 (910)
T ss_pred             cccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcc-cCeeecccccCccccCceeEEEecCCCceEEEcc
Confidence            4211 1112223345789999999999999999999999999998 33333333             3334478899999


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  452 (537)
                      .+|.+.+||......+..+....                  .+..+.++.....++.+..|-.|.++|..+.+.++.+.+
T Consensus       513 ~~Gilkfw~f~~k~l~~~l~l~~------------------~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g  574 (910)
T KOG1539|consen  513 ADGILKFWDFKKKVLKKSLRLGS------------------SITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWG  574 (910)
T ss_pred             CcceEEEEecCCcceeeeeccCC------------------CcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhc
Confidence            99999999999988777765544                  677788888888999999999999999999999999999


Q ss_pred             CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC-
Q psy10942        453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS-  531 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d-  531 (537)
                      |.+.|++++|||||++|++++.|++||+||+.++.++-.+.. +.+.           .++   .|||+|.+|||+..| 
T Consensus       575 h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~-----------~sl---s~SPngD~LAT~Hvd~  639 (910)
T KOG1539|consen  575 HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPC-----------TSL---SFSPNGDFLATVHVDQ  639 (910)
T ss_pred             cccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcc-----------eee---EECCCCCEEEEEEecC
Confidence            999999999999999999999999999999999999877654 3355           788   999999999999888 


Q ss_pred             CCEEeC
Q psy10942        532 PQVVVY  537 (537)
Q Consensus       532 g~i~vW  537 (537)
                      .-|.+|
T Consensus       640 ~gIylW  645 (910)
T KOG1539|consen  640 NGIYLW  645 (910)
T ss_pred             ceEEEE
Confidence            568877

>KOG0279|consensus

Probab=100.00  E-value=3.3e-38  Score=257.21  Aligned_cols=296  Identities=20%  Similarity=0.236  Sum_probs=237.4

Q ss_pred             hhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         91 YQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        91 ~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      .++.+| ++|+.++..+. .+.|++++.|..+.+|++...      ..+.+..++.++||+..|..+..+ +++++.+++
T Consensus         9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d------d~~~G~~~r~~~GHsH~v~dv~~s-~dg~~alS~   81 (315)
T KOG0279|consen    9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD------DIKYGVPVRRLTGHSHFVSDVVLS-SDGNFALSA   81 (315)
T ss_pred             eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC------ccccCceeeeeeccceEecceEEc-cCCceEEec
Confidence            344544 79999999887 457889999999999999873      334477899999999999999999 899999999


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      +.++.    +                 ++||+       .+++..  +.     ||  ...|.++   +|++|.+.+++|
T Consensus        82 swD~~----l-----------------rlWDl-------~~g~~t~~f~-----GH--~~dVlsv---a~s~dn~qivSG  123 (315)
T KOG0279|consen   82 SWDGT----L-----------------RLWDL-------ATGESTRRFV-----GH--TKDVLSV---AFSTDNRQIVSG  123 (315)
T ss_pred             cccce----E-----------------EEEEe-------cCCcEEEEEE-----ec--CCceEEE---EecCCCceeecC
Confidence            98888    9                 99999       877655  78     99  9999999   999999999999


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.|.+|+  +|++....                                   .+.+.            -..+.+.|.|+
T Consensus       124 SrDkTik--lwnt~g~c-----------------------------------k~t~~------------~~~~~~WVscv  154 (315)
T KOG0279|consen  124 SRDKTIK--LWNTLGVC-----------------------------------KYTIH------------EDSHREWVSCV  154 (315)
T ss_pred             CCcceee--eeeecccE-----------------------------------EEEEe------------cCCCcCcEEEE
Confidence            9999999  99987620                                   11111            11236789999


Q ss_pred             EEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        327 TVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       327 ~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      .|+|+  ..++++++.|+++++||++ +.+....+.+|..                                        
T Consensus       155 rfsP~~~~p~Ivs~s~DktvKvWnl~-~~~l~~~~~gh~~----------------------------------------  193 (315)
T KOG0279|consen  155 RFSPNESNPIIVSASWDKTVKVWNLR-NCQLRTTFIGHSG----------------------------------------  193 (315)
T ss_pred             EEcCCCCCcEEEEccCCceEEEEccC-Ccchhhccccccc----------------------------------------
Confidence            99998  6789999999999999998 5555555555543                                        


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                               .++.+++||||..+++|+.||.+.+||++.++.+..+. |...|.+++|+|+.-.|+.+. +..|+|||++
T Consensus       194 ---------~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at-~~sIkIwdl~  262 (315)
T KOG0279|consen  194 ---------YVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLE  262 (315)
T ss_pred             ---------cEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeecc-CCceEEEecc
Confidence                     78899999999999999999999999999999988887 788999999999976666554 5569999999


Q ss_pred             CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++..+..+.......  ........-.++   +||+||..|+.+-.|+.|++|
T Consensus       263 ~~~~v~~l~~d~~g~--s~~~~~~~clsl---aws~dG~tLf~g~td~~irv~  310 (315)
T KOG0279|consen  263 SKAVVEELKLDGIGP--SSKAGDPICLSL---AWSADGQTLFAGYTDNVIRVW  310 (315)
T ss_pred             chhhhhhcccccccc--ccccCCcEEEEE---EEcCCCcEEEeeecCCcEEEE
Confidence            998887664321100  000011111556   999999999999999999998

>KOG0273|consensus

Probab=100.00  E-value=4.7e-38  Score=274.23  Aligned_cols=327  Identities=20%  Similarity=0.276  Sum_probs=263.3

Q ss_pred             CCcceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEe--ec----chhhhhhhhcccCCCccEEE
Q psy10942         95 LSSPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF--VG----FSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~----~~~~v~~~~~~~~~~~~l~~  167 (537)
                      +..+|.+.+|+|-.. .||+++.|-..++|++........   ....+...+  .+    ....|++++|+ .++..|++
T Consensus       177 ~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~---~q~~lrh~~~~~~~s~~~nkdVT~L~Wn-~~G~~Lat  252 (524)
T KOG0273|consen  177 HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGS---TQLVLRHCIREGGKSVPSNKDVTSLDWN-NDGTLLAT  252 (524)
T ss_pred             CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccc---hhhhhhhhhhhhcccCCccCCcceEEec-CCCCeEEE
Confidence            346899999999877 899999999999999875111000   000111111  11    12459999999 89999999


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      ++.++.    +                 ++|+.       ...... +.     .|  .++|.++   .|+.+|.||+++
T Consensus       253 G~~~G~----~-----------------riw~~-------~G~l~~tl~-----~H--kgPI~sl---KWnk~G~yilS~  294 (524)
T KOG0273|consen  253 GSEDGE----A-----------------RIWNK-------DGNLISTLG-----QH--KGPIFSL---KWNKKGTYILSG  294 (524)
T ss_pred             eecCcE----E-----------------EEEec-------Cchhhhhhh-----cc--CCceEEE---EEcCCCCEEEec
Confidence            988887    9                 99998       655555 88     89  9999999   999999999999


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcc-------eEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-------ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      +.|+++.  +||...+..         ...+..|....+       ..+++++.|+.|+++.+....+     ...+.+|
T Consensus       295 ~vD~tti--lwd~~~g~~---------~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P-----~~t~~GH  358 (524)
T KOG0273|consen  295 GVDGTTI--LWDAHTGTV---------KQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRP-----VKTFIGH  358 (524)
T ss_pred             cCCccEE--EEeccCceE---------EEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCc-----ceeeecc
Confidence            9999999  999987432         334444544322       6899999999999999988776     5566789


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      .++|.++.|+|.+.+|++++.|++++||+.. .....                                ..+..|+..|+
T Consensus       359 ~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~-~~~~~--------------------------------~~l~~Hskei~  405 (524)
T KOG0273|consen  359 HGEVNALKWNPTGSLLASCSDDGTLKIWSMG-QSNSV--------------------------------HDLQAHSKEIY  405 (524)
T ss_pred             cCceEEEEECCCCceEEEecCCCeeEeeecC-CCcch--------------------------------hhhhhhcccee
Confidence            9999999999999999999999999999987 33333                                34455666777


Q ss_pred             EEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcE
Q psy10942        400 TLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLL  478 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  478 (537)
                      .+.++|.+.         +..+| .+..+++++.|++|++||+..+.++..|..|..+|.+++|+|+|+++|+|+.||.|
T Consensus       406 t~~wsp~g~---------v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V  476 (524)
T KOG0273|consen  406 TIKWSPTGP---------VTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV  476 (524)
T ss_pred             eEeecCCCC---------ccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCee
Confidence            777777653         22333 35689999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      .+|+.+++++.+.+.+.. .|           ..+   +|+.+|..|..+-.||.+++
T Consensus       477 ~iws~~~~~l~~s~~~~~-~I-----------fel---~Wn~~G~kl~~~~sd~~vcv  519 (524)
T KOG0273|consen  477 HIWSTKTGKLVKSYQGTG-GI-----------FEL---CWNAAGDKLGACASDGSVCV  519 (524)
T ss_pred             EeccccchheeEeecCCC-eE-----------EEE---EEcCCCCEEEEEecCCCceE
Confidence            999999999999987654 57           888   99999999999888998875

>KOG0315|consensus

Probab=100.00  E-value=1.1e-37  Score=249.89  Aligned_cols=294  Identities=18%  Similarity=0.229  Sum_probs=242.2

Q ss_pred             CcceEEEecCcceEEEEEcCccceeeeecccccc-ceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh--hh
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESL-ETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE--LY   91 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~--~~   91 (537)
                      +.-+|+|+|-|-+|++|...+|.+.+++++.+.- ..+  ...|        ++++|++++ ...|++||+.+++.  +.
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrL--eiTp--------dk~~LAaa~-~qhvRlyD~~S~np~Pv~   77 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRL--EITP--------DKKDLAAAG-NQHVRLYDLNSNNPNPVA   77 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeEEEEEecCccceeeE--EEcC--------Ccchhhhcc-CCeeEEEEccCCCCCcee
Confidence            4568999999999999999999999999977654 445  3466        778888888 66799999998765  77


Q ss_pred             hcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942         92 QHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus        92 ~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                      ++..+ ..|+++.|..||+++++|++||+++|||+..           ..+.+.++ |..+|+++..+ |+...|+++..
T Consensus        78 t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~-----------~~~qR~~~-~~spVn~vvlh-pnQteLis~dq  144 (311)
T KOG0315|consen   78 TFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS-----------LSCQRNYQ-HNSPVNTVVLH-PNQTELISGDQ  144 (311)
T ss_pred             EEeccCCceEEEEEeecCeEEEecCCCceEEEEeccC-----------cccchhcc-CCCCcceEEec-CCcceEEeecC
Confidence            77777 7999999999999999999999999999998           55555555 66889999999 67778888877


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                      ++.    |                 ++||+       ....+.   ++     ..  ...|.++   ...|||.+++.+.
T Consensus       145 sg~----i-----------------rvWDl-------~~~~c~~~liP-----e~--~~~i~sl---~v~~dgsml~a~n  186 (311)
T KOG0315|consen  145 SGN----I-----------------RVWDL-------GENSCTHELIP-----ED--DTSIQSL---TVMPDGSMLAAAN  186 (311)
T ss_pred             CCc----E-----------------EEEEc-------cCCccccccCC-----CC--CcceeeE---EEcCCCcEEEEec
Confidence            766    9                 99999       666554   33     44  6789999   9999999999999


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      ..|...  +|++-......                                     .-+.     ...++.|.+.+..+.
T Consensus       187 nkG~cy--vW~l~~~~~~s-------------------------------------~l~P-----~~k~~ah~~~il~C~  222 (311)
T KOG0315|consen  187 NKGNCY--VWRLLNHQTAS-------------------------------------ELEP-----VHKFQAHNGHILRCL  222 (311)
T ss_pred             CCccEE--EEEccCCCccc-------------------------------------cceE-----hhheecccceEEEEE
Confidence            999999  99887621100                                     0000     344678999999999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      +|||+++|++++.|.+++||+...-.+....+.+|..                                           
T Consensus       223 lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~r-------------------------------------------  259 (311)
T KOG0315|consen  223 LSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQR-------------------------------------------  259 (311)
T ss_pred             ECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCc-------------------------------------------
Confidence            9999999999999999999999943355555555543                                           


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                            .++..+||.||+||++|+.|+.+++|++..++.++.+.+|.....+++..
T Consensus       260 ------WvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  260 ------WVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             ------eEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence                  88889999999999999999999999999999999999999888887754

>KOG0295|consensus

Probab=100.00  E-value=1.6e-37  Score=262.31  Aligned_cols=292  Identities=21%  Similarity=0.297  Sum_probs=248.0

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ...|+.+-|.|+-...++++.|.+|++||..+           +++.+.++||.+.|.+++|+ ..+.+++.++.+-.  
T Consensus       108 r~~vt~v~~hp~~~~v~~as~d~tikv~D~~t-----------g~~e~~LrGHt~sv~di~~~-a~Gk~l~tcSsDl~--  173 (406)
T KOG0295|consen  108 RSSVTRVIFHPSEALVVSASEDATIKVFDTET-----------GELERSLRGHTDSVFDISFD-ASGKYLATCSSDLS--  173 (406)
T ss_pred             ccceeeeeeccCceEEEEecCCceEEEEEccc-----------hhhhhhhhccccceeEEEEe-cCccEEEecCCccc--
Confidence            36899999999999999999999999999999           78899999999999999999 78889999988887  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                        +                 ++||.       .+ .++.  +.     +|  ...|.++   .|-|.|.++++++.|.+|
T Consensus       174 --~-----------------~LWd~-------~~~~~c~ks~~-----gh--~h~vS~V---~f~P~gd~ilS~srD~ti  217 (406)
T KOG0295|consen  174 --A-----------------KLWDF-------DTFFRCIKSLI-----GH--EHGVSSV---FFLPLGDHILSCSRDNTI  217 (406)
T ss_pred             --h-----------------hheeH-------HHHHHHHHHhc-----Cc--ccceeeE---EEEecCCeeeecccccce
Confidence              8                 99999       54 3444  66     99  9999999   999999999999988888


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      +  .|++.++    .|                                            ...+.+|...|..++.+.||
T Consensus       218 k--~We~~tg----~c--------------------------------------------v~t~~~h~ewvr~v~v~~DG  247 (406)
T KOG0295|consen  218 K--AWECDTG----YC--------------------------------------------VKTFPGHSEWVRMVRVNQDG  247 (406)
T ss_pred             e--EEecccc----ee--------------------------------------------EEeccCchHhEEEEEecCCe
Confidence            8  7777762    22                                            34456788889999999999


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      .++++++.|.++++|-+. .                                +++...+..|..++.+++|.|.....  
T Consensus       248 ti~As~s~dqtl~vW~~~-t--------------------------------~~~k~~lR~hEh~vEci~wap~~~~~--  292 (406)
T KOG0295|consen  248 TIIASCSNDQTLRVWVVA-T--------------------------------KQCKAELREHEHPVECIAWAPESSYP--  292 (406)
T ss_pred             eEEEecCCCceEEEEEec-c--------------------------------chhhhhhhccccceEEEEecccccCc--
Confidence            999999999888888777 3                                33444555666677777777765321  


Q ss_pred             eeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        413 GGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       413 ~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                       .|....=+. .++++.+++.|++|++||+.++.++.++.+|.+.|..++|+|.|+||+++.+|+++++||+++++++..
T Consensus       293 -~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~  371 (406)
T KOG0295|consen  293 -SISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKT  371 (406)
T ss_pred             -chhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeec
Confidence             111111111 357999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++.|..-+           +++   +|+.+..+++||+-|.++++|
T Consensus       372 ~~ah~hfv-----------t~l---Dfh~~~p~VvTGsVdqt~Kvw  403 (406)
T KOG0295|consen  372 LEAHEHFV-----------TSL---DFHKTAPYVVTGSVDQTVKVW  403 (406)
T ss_pred             cCCCccee-----------EEE---ecCCCCceEEeccccceeeee
Confidence            99999988           889   999999999999999999998

>KOG0296|consensus

Probab=100.00  E-value=5e-37  Score=259.49  Aligned_cols=326  Identities=17%  Similarity=0.202  Sum_probs=263.9

Q ss_pred             eeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc
Q psy10942        141 FRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE  218 (537)
Q Consensus       141 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~  218 (537)
                      .+.+|..|.+.|.+++.+| +.+.+++++++..    -                 .+|++       .++...  +.   
T Consensus        56 S~~tF~~H~~svFavsl~P-~~~l~aTGGgDD~----A-----------------flW~~-------~~ge~~~elt---  103 (399)
T KOG0296|consen   56 SLVTFDKHTDSVFAVSLHP-NNNLVATGGGDDL----A-----------------FLWDI-------STGEFAGELT---  103 (399)
T ss_pred             ceeehhhcCCceEEEEeCC-CCceEEecCCCce----E-----------------EEEEc-------cCCcceeEec---
Confidence            4568899999999999995 7676666666655    6                 88999       888765  77   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc-cccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI-FVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                        +|  ...|+++   .|+.+|.+||+|..+|.++  +|+..++....... ....+.=+..|+..  ..|+.|+.||.+
T Consensus       104 --gH--KDSVt~~---~FshdgtlLATGdmsG~v~--v~~~stg~~~~~~~~e~~dieWl~WHp~a--~illAG~~DGsv  172 (399)
T KOG0296|consen  104 --GH--KDSVTCC---SFSHDGTLLATGDMSGKVL--VFKVSTGGEQWKLDQEVEDIEWLKWHPRA--HILLAGSTDGSV  172 (399)
T ss_pred             --CC--CCceEEE---EEccCceEEEecCCCccEE--EEEcccCceEEEeecccCceEEEEecccc--cEEEeecCCCcE
Confidence              99  9999999   9999999999999999999  99999865432221 11123334455532  689999999999


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----------cCCCC
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----------HKKGT  366 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------~~~~~  366 (537)
                      .+|.+..+..     .+.+.+|..++++=.|.|+|+.++++..||+|++||+. +.+++..+..           ...+.
T Consensus       173 Wmw~ip~~~~-----~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k-tg~p~~~~~~~e~~~~~~~~~~~~~~  246 (399)
T KOG0296|consen  173 WMWQIPSQAL-----CKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK-TGQPLHKITQAEGLELPCISLNLAGS  246 (399)
T ss_pred             EEEECCCcce-----eeEecCCCCCcccccccCCCceEEEEecCceEEEEecC-CCceeEEecccccCcCCccccccccc
Confidence            9999998643     55678999999999999999999999999999999999 6666666652           23477


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC  446 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~  446 (537)
                      .++.+..++.+++-+..+++.+....+..   ..+..+...   ....|.++.++..-.+.|+|+-||+|.|||+...++
T Consensus       247 ~~~~g~~e~~~~~~~~~sgKVv~~~n~~~---~~l~~~~e~---~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~  320 (399)
T KOG0296|consen  247 TLTKGNSEGVACGVNNGSGKVVNCNNGTV---PELKPSQEE---LDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTL  320 (399)
T ss_pred             eeEeccCCccEEEEccccceEEEecCCCC---ccccccchh---hhhhhhhcccccccchhhcccccceEEEEecccchh
Confidence            88999999999999999999887776411   011111100   001344555666667899999999999999998877


Q ss_pred             eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      ...+. |..+|+.+.|-+ ..+|++++.+|.|+.||.++|+++..+.+|...|           ..+   +.+|++++++
T Consensus       321 R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~I-----------l~f---~ls~~~~~vv  384 (399)
T KOG0296|consen  321 RHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGI-----------LDF---ALSPQKRLVV  384 (399)
T ss_pred             heecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchhe-----------eEE---EEcCCCcEEE
Confidence            77766 889999999998 6799999999999999999999999999999999           999   9999999999


Q ss_pred             EEeCCCCEEeC
Q psy10942        527 RGGWSPQVVVY  537 (537)
Q Consensus       527 s~~~dg~i~vW  537 (537)
                      |+|.|++.+||
T Consensus       385 T~s~D~~a~VF  395 (399)
T KOG0296|consen  385 TVSDDNTALVF  395 (399)
T ss_pred             EecCCCeEEEE
Confidence            99999999885

>KOG0263|consensus

Probab=100.00  E-value=1.7e-37  Score=288.26  Aligned_cols=267  Identities=23%  Similarity=0.307  Sum_probs=222.7

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..+.|..||+|+++||.|..|..|++|.+..           . .++.+++... +..     ++     ..+.+-.   
T Consensus       379 ~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p-----------~-kl~~lk~~~~-l~~-----~d-----~~sad~~---  432 (707)
T KOG0263|consen  379 QGVTCAEFSDDSSMLACGFVDSSVRVWSLTP-----------K-KLKKLKDASD-LSN-----ID-----TESADVD---  432 (707)
T ss_pred             CcceeEeecCCcchhhccccccEEEEEecch-----------h-hhccccchhh-hcc-----cc-----ccccchh---
Confidence            5799999999999999999999999999986           2 2334442221 111     11     1122222   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       +                 .+.|.      ...+... +.     ||  .++|...   .|+|+.++|++++.|+++|  
T Consensus       433 -~-----------------~~~D~------~~~~~~~~L~-----GH--~GPVyg~---sFsPd~rfLlScSED~svR--  476 (707)
T KOG0263|consen  433 -V-----------------DMLDD------DSSGTSRTLY-----GH--SGPVYGC---SFSPDRRFLLSCSEDSSVR--  476 (707)
T ss_pred             -h-----------------hhccc------cCCceeEEee-----cC--CCceeee---eecccccceeeccCCccee--
Confidence             2                 33333      0222223 66     99  9999999   9999999999999999999  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      +|.+.+.    .+                                            .-.+++|..+|.++.|+|.|.++
T Consensus       477 LWsl~t~----s~--------------------------------------------~V~y~GH~~PVwdV~F~P~GyYF  508 (707)
T KOG0263|consen  477 LWSLDTW----SC--------------------------------------------LVIYKGHLAPVWDVQFAPRGYYF  508 (707)
T ss_pred             eeecccc----ee--------------------------------------------EEEecCCCcceeeEEecCCceEE
Confidence            9988872    11                                            22245899999999999999999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      |+++.|++.++|... ...+.+.+.+|-.                                                 .+
T Consensus       509 atas~D~tArLWs~d-~~~PlRifaghls-------------------------------------------------DV  538 (707)
T KOG0263|consen  509 ATASHDQTARLWSTD-HNKPLRIFAGHLS-------------------------------------------------DV  538 (707)
T ss_pred             EecCCCceeeeeecc-cCCchhhhccccc-------------------------------------------------cc
Confidence            999999999999988 5666666666654                                                 78


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                      .|+.|+|+..|+++|+.|.++++||..+|..++.|.||.++|.+++|||+|++|++|+.||.|.+||+.+++++..+.+|
T Consensus       539 ~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H  618 (707)
T KOG0263|consen  539 DCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH  618 (707)
T ss_pred             ceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        496 ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       496 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+.|           .++   .||.||..||+++.|.+|++|
T Consensus       619 t~ti-----------~Sl---sFS~dg~vLasgg~DnsV~lW  646 (707)
T KOG0263|consen  619 TGTI-----------YSL---SFSRDGNVLASGGADNSVRLW  646 (707)
T ss_pred             cCce-----------eEE---EEecCCCEEEecCCCCeEEEE
Confidence            9999           999   999999999999999999999

>KOG0279|consensus

Probab=100.00  E-value=3.7e-36  Score=245.28  Aligned_cols=285  Identities=19%  Similarity=0.264  Sum_probs=224.4

Q ss_pred             eec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccc-----eehhhhcCCCc-ceEEEEEeccccEEEE
Q psy10942         41 SYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSA-----VKELYQHGLSS-PLVRIVRSSVKRMYAV  113 (537)
Q Consensus        41 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~-----~~~~~~~~~~~-~v~~~~~s~~~~~la~  113 (537)
                      +++ +...+..+++  .+.       +...+++++.|..+.+|++..     |..++.+++|. .|..++.++||++.++
T Consensus        10 tl~gh~d~Vt~la~--~~~-------~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS   80 (315)
T KOG0279|consen   10 TLEGHTDWVTALAI--KIK-------NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALS   80 (315)
T ss_pred             eecCCCceEEEEEe--ecC-------CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEe
Confidence            344 4455666633  443       557899999999999998754     56678888774 8999999999999999


Q ss_pred             EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942        114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW  193 (537)
Q Consensus       114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~  193 (537)
                      ++.|+++++||+.+           ++..+.|.+|...|.+++|+ ++++++++++.++.    |               
T Consensus        81 ~swD~~lrlWDl~~-----------g~~t~~f~GH~~dVlsva~s-~dn~qivSGSrDkT----i---------------  129 (315)
T KOG0279|consen   81 ASWDGTLRLWDLAT-----------GESTRRFVGHTKDVLSVAFS-TDNRQIVSGSRDKT----I---------------  129 (315)
T ss_pred             ccccceEEEEEecC-----------CcEEEEEEecCCceEEEEec-CCCceeecCCCcce----e---------------
Confidence            99999999999999           78899999999999999999 88889999998888    9               


Q ss_pred             hHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcceeccccccCCCccccccc
Q psy10942        194 FDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTLEELEKRKTYHFPLFGIF  270 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~  270 (537)
                        ++|+.       ...... +.   ..++  .+.|.|+   .|+|+  ..++++++.|++++  +||+++         
T Consensus       130 --klwnt-------~g~ck~t~~---~~~~--~~WVscv---rfsP~~~~p~Ivs~s~DktvK--vWnl~~---------  181 (315)
T KOG0279|consen  130 --KLWNT-------LGVCKYTIH---EDSH--REWVSCV---RFSPNESNPIIVSASWDKTVK--VWNLRN---------  181 (315)
T ss_pred             --eeeee-------cccEEEEEe---cCCC--cCcEEEE---EEcCCCCCcEEEEccCCceEE--EEccCC---------
Confidence              99998       433332 32   0133  6889999   99998  45666666666666  666655         


Q ss_pred             ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                                                        .+.     ...+.+|.+.++.+++||||.++++|+.||.+.+||++
T Consensus       182 ----------------------------------~~l-----~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~  222 (315)
T KOG0279|consen  182 ----------------------------------CQL-----RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN  222 (315)
T ss_pred             ----------------------------------cch-----hhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence                                              322     44556899999999999999999999999999999999


Q ss_pred             CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942        351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS  430 (537)
Q Consensus       351 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  430 (537)
                       ..+.+..+....                                                  .|.+++|+|+...|+.+
T Consensus       223 -~~k~lysl~a~~--------------------------------------------------~v~sl~fspnrywL~~a  251 (315)
T KOG0279|consen  223 -EGKNLYSLEAFD--------------------------------------------------IVNSLCFSPNRYWLCAA  251 (315)
T ss_pred             -CCceeEeccCCC--------------------------------------------------eEeeEEecCCceeEeec
Confidence             444444333211                                                  78899999988777766


Q ss_pred             eCCCcEEEEECCCceeeeEeecC---------CcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        431 SGDATIKLWCLTDYVCLKSLEGH---------DASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       431 ~~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      .. ..|+|||+.++..+..++..         .-...+++|++||..|+++..|+.|++|.+.
T Consensus       252 t~-~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  252 TA-TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             cC-CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            54 56999999998877766421         2235678999999999999999999999874

>KOG0295|consensus

Probab=100.00  E-value=6.7e-37  Score=258.57  Aligned_cols=284  Identities=19%  Similarity=0.347  Sum_probs=248.2

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      +...++++++|++|++||..+|++...+++| +.+..++|+..|++||+++.|-.+.+||.++.          .++++.
T Consensus       119 ~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~----------~~c~ks  188 (406)
T KOG0295|consen  119 SEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF----------FRCIKS  188 (406)
T ss_pred             CceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH----------HHHHHH
Confidence            6688999999999999999999999999987 58999999999999999999999999999885          788899


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +.+|...|.+++|- |.+.++++++.+..    |                 +.|+.       .++.+.  +.     +|
T Consensus       189 ~~gh~h~vS~V~f~-P~gd~ilS~srD~t----i-----------------k~We~-------~tg~cv~t~~-----~h  234 (406)
T KOG0295|consen  189 LIGHEHGVSSVFFL-PLGDHILSCSRDNT----I-----------------KAWEC-------DTGYCVKTFP-----GH  234 (406)
T ss_pred             hcCcccceeeEEEE-ecCCeeeecccccc----e-----------------eEEec-------ccceeEEecc-----Cc
Confidence            99999999999999 66789999999988    9                 99999       999988  78     99


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...|..+   +.+.||..+++++.|.+++  +|-+.+                                         
T Consensus       235 --~ewvr~v---~v~~DGti~As~s~dqtl~--vW~~~t-----------------------------------------  266 (406)
T KOG0295|consen  235 --SEWVRMV---RVNQDGTIIASCSNDQTLR--VWVVAT-----------------------------------------  266 (406)
T ss_pred             --hHhEEEE---EecCCeeEEEecCCCceEE--EEEecc-----------------------------------------
Confidence              8999999   9999999999998888888  777665                                         


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                        ++.     ...+..|.-+|.+++|-|...+  ....       +.. +        ....+.++.+++.|++|++||+
T Consensus       267 --~~~-----k~~lR~hEh~vEci~wap~~~~--~~i~-------~at-~--------~~~~~~~l~s~SrDktIk~wdv  321 (406)
T KOG0295|consen  267 --KQC-----KAELREHEHPVECIAWAPESSY--PSIS-------EAT-G--------STNGGQVLGSGSRDKTIKIWDV  321 (406)
T ss_pred             --chh-----hhhhhccccceEEEEecccccC--cchh-------hcc-C--------CCCCccEEEeecccceEEEEec
Confidence              221     3456788899999999986531  1100       000 0        0115678899999999999999


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~  462 (537)
                      .++.++.++.+|..                 .|..++|+|.|+||+++..|+++++||++++++...+..|..-|+++.|
T Consensus       322 ~tg~cL~tL~ghdn-----------------wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDf  384 (406)
T KOG0295|consen  322 STGMCLFTLVGHDN-----------------WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDF  384 (406)
T ss_pred             cCCeEEEEEecccc-----------------eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEec
Confidence            99999999999987                 7888899999999999999999999999999999999999999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEEC
Q psy10942        463 INKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      +.+..++++|+-|.++++|..
T Consensus       385 h~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  385 HKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             CCCCceEEeccccceeeeeec
Confidence            999999999999999999974

>KOG0284|consensus

Probab=100.00  E-value=5.7e-38  Score=268.80  Aligned_cols=278  Identities=18%  Similarity=0.262  Sum_probs=240.8

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..|..+.|.|+|+.|++|+..|.+.+|+..+           ......+..|...|.+|.|+ .++..++++..++.   
T Consensus        97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-----------fnFEtilQaHDs~Vr~m~ws-~~g~wmiSgD~gG~---  161 (464)
T KOG0284|consen   97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-----------FNFETILQAHDSPVRTMKWS-HNGTWMISGDKGGM---  161 (464)
T ss_pred             cceeeEEEcCCCceeEeecccccEEEecCce-----------eeHHHHhhhhcccceeEEEc-cCCCEEEEcCCCce---
Confidence            4799999999999999999999999999877           66666788999999999999 88888887776666   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       |                 ++|+.       ...... +.     +|- ...|.++   +|+|+...|++++.||+|+  
T Consensus       162 -i-----------------KyWqp-------nmnnVk~~~-----ahh-~eaIRdl---afSpnDskF~t~SdDg~ik--  205 (464)
T KOG0284|consen  162 -I-----------------KYWQP-------NMNNVKIIQ-----AHH-AEAIRDL---AFSPNDSKFLTCSDDGTIK--  205 (464)
T ss_pred             -E-----------------Eeccc-------chhhhHHhh-----Hhh-hhhhhee---ccCCCCceeEEecCCCeEE--
Confidence             9                 99998       555555 44     440 5899999   9999999999999999888  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      |||.....                                           .     ...+.+|.-.|.+++|+|...++
T Consensus       206 iWdf~~~k-------------------------------------------e-----e~vL~GHgwdVksvdWHP~kgLi  237 (464)
T KOG0284|consen  206 IWDFRMPK-------------------------------------------E-----ERVLRGHGWDVKSVDWHPTKGLI  237 (464)
T ss_pred             EEeccCCc-------------------------------------------h-----hheeccCCCCcceeccCCcccee
Confidence            88876621                                           1     23357899999999999999999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      ++++.|..|++||.+ .+.++.++..|..                                                 .|
T Consensus       238 asgskDnlVKlWDpr-Sg~cl~tlh~HKn-------------------------------------------------tV  267 (464)
T KOG0284|consen  238 ASGSKDNLVKLWDPR-SGSCLATLHGHKN-------------------------------------------------TV  267 (464)
T ss_pred             EEccCCceeEeecCC-Ccchhhhhhhccc-------------------------------------------------eE
Confidence            999999999999988 6666666666655                                                 88


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCCCeeEEEe-c
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKTSTCVSTF-D  493 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~-~  493 (537)
                      ..+.|+|++++|++++.|..++++|+++.+.+..+++|...|+++.|+| ...+|.+|+.||.|..|.+...+++..+ .
T Consensus       268 l~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~  347 (464)
T KOG0284|consen  268 LAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPP  347 (464)
T ss_pred             EEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCc
Confidence            8999999999999999999999999999999999999999999999999 5678999999999999999855555554 4


Q ss_pred             CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        494 KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       494 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|...|           +++   +|+|-|..|++|+.|.++++|
T Consensus       348 AHd~~i-----------wsl---~~hPlGhil~tgsnd~t~rfw  377 (464)
T KOG0284|consen  348 AHDGEI-----------WSL---AYHPLGHILATGSNDRTVRFW  377 (464)
T ss_pred             ccccce-----------eee---eccccceeEeecCCCcceeee
Confidence            788999           999   999999999999999999998

>KOG1063|consensus

Probab=100.00  E-value=8.2e-35  Score=265.73  Aligned_cols=471  Identities=16%  Similarity=0.196  Sum_probs=313.7

Q ss_pred             eeeeeeeeeccCC-cceEEEecCcceEEEEEcCccceee--eeccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          3 FCVTCFDVIPQIT-SEFSVHCGRDKVLFTWDLSSRKQLR--SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         3 ~~V~~~~~~~~~~-~~~l~s~~~~g~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      -.|+|+.+.|+.+ ..++++|+.|+.|++|.++.....+  .+++ ......++..          ......+...++.+
T Consensus        55 a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g-~~~~~~cv~a----------~~~~~~~~~ad~~v  123 (764)
T KOG1063|consen   55 ARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQG-HCKECVCVVA----------RSSVMTCKAADGTV  123 (764)
T ss_pred             cceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecC-cceeEEEEEe----------eeeEEEeeccCceE
Confidence            4699999994333 1289999999999999998444433  4443 2333332222          22233334679999


Q ss_pred             Eeeecccee--hhhhcCCC-c--ceEEEEEecc-cc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942         80 HYYETSAVK--ELYQHGLS-S--PLVRIVRSSV-KR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI  152 (537)
Q Consensus        80 ~~wd~~~~~--~~~~~~~~-~--~v~~~~~s~~-~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  152 (537)
                      .+||.+..+  +...+... +  -..++++.|+ +. .||.|+.+..|.++.-..+         ....+..+.||.++|
T Consensus       124 ~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d---------~f~~v~el~GH~DWI  194 (764)
T KOG1063|consen  124 SVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSAD---------SFARVAELEGHTDWI  194 (764)
T ss_pred             EEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCc---------ceeEEEEeeccchhh
Confidence            999985544  22222211 2  2345555663 33 4677777888888876542         167788999999999


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc--------------------ccccc
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK--------------------QSSSQ  212 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~--------------------~~~~~  212 (537)
                      .+++|..+.++.+++++++.+  ..|                 |||.+.......                    .....
T Consensus       195 rsl~f~~~~~~~~~laS~SQD--~yI-----------------RiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~  255 (764)
T KOG1063|consen  195 RSLAFARLGGDDLLLASSSQD--RYI-----------------RIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQY  255 (764)
T ss_pred             hhhhhhccCCCcEEEEecCCc--eEE-----------------EEEEEEecCCccccccccccccccCCceeeeeeeEEE
Confidence            999999666646666666665  446                 666441111000                    00000


Q ss_pred             cccc-cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceee--------eeeCC
Q psy10942        213 QKHN-TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGA--------FYTGG  283 (537)
Q Consensus       213 ~l~~-~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~--------~~~~~  283 (537)
                      .+.. ..+.||  .+.|.++   .|+|.+..|++++.|.++.  +|......+.......  +..+.        ++-..
T Consensus       256 ~is~eall~GH--eDWV~sv---~W~p~~~~LLSASaDksmi--iW~pd~~tGiWv~~vR--lGe~gg~a~GF~g~lw~~  326 (764)
T KOG1063|consen  256 RISFEALLMGH--EDWVYSV---WWHPEGLDLLSASADKSMI--IWKPDENTGIWVDVVR--LGEVGGSAGGFWGGLWSP  326 (764)
T ss_pred             EEehhhhhcCc--ccceEEE---EEccchhhheecccCcceE--EEecCCccceEEEEEE--eecccccccceeeEEEcC
Confidence            0000 112399  9999999   9999999999999999999  9998886544333110  11111        11111


Q ss_pred             cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee--------
Q psy10942        284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL--------  355 (537)
Q Consensus       284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~--------  355 (537)
                      ..+.+++-+..|..++|..+....  -.......+|.+.|++++|+|.|.+|++.+.|.+-++|-.......        
T Consensus       327 n~~~ii~~g~~Gg~hlWkt~d~~~--w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQ  404 (764)
T KOG1063|consen  327 NSNVIIAHGRTGGFHLWKTKDKTF--WTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQ  404 (764)
T ss_pred             CCCEEEEecccCcEEEEeccCccc--eeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccc
Confidence            126788888999999999333221  1125567899999999999999999999999999999876522111        


Q ss_pred             -----eEEEEecCCCCEEEEEcCCCcEEEEECCCCee--ee-----eec-----cCCcceEEEEEec-------------
Q psy10942        356 -----LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC--VS-----TFD-----KHALKIWTLAITK-------------  405 (537)
Q Consensus       356 -----~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~-----~~~-----~~~~~i~~~~~~~-------------  405 (537)
                           +..+..-+....+++|..+..+|+|+....-.  +.     .+.     .....+..+..+.             
T Consensus       405 iHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~  484 (764)
T KOG1063|consen  405 IHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGE  484 (764)
T ss_pred             cccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccc
Confidence                 12222222356778888888899998652100  00     000     0000111111110             


Q ss_pred             --------------------CCCceEE--------------eeeeEEEEcCCCCEEEEEeCC-----CcEEEEECCCcee
Q psy10942        406 --------------------DENQIIT--------------GGVWFVNFSPLDRILISSSGD-----ATIKLWCLTDYVC  446 (537)
Q Consensus       406 --------------------~~~~~~~--------------~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~  446 (537)
                                          -..++..              -.|++++.+|+++++|+++..     ..|++|+..+...
T Consensus       485 ~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~  564 (764)
T KOG1063|consen  485 AAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQ  564 (764)
T ss_pred             cceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhh
Confidence                                0000000              149999999999999998754     4699999999999


Q ss_pred             eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee----EEEecCCccceeccCCCCCCccccccceeeecCC
Q psy10942        447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC----VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      ...+.+|.-.|+.++||||+++|++++.|.++.+|+......    ....+.|...|           ++.   +|+|++
T Consensus       565 ~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRII-----------Wdc---sW~pde  630 (764)
T KOG1063|consen  565 VQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRII-----------WDC---SWSPDE  630 (764)
T ss_pred             hheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEE-----------EEc---ccCccc
Confidence            999999999999999999999999999999999998754322    23367899999           999   999999


Q ss_pred             CEEEEEeCCCCEEeC
Q psy10942        523 DCEYRGGWSPQVVVY  537 (537)
Q Consensus       523 ~~l~s~~~dg~i~vW  537 (537)
                      .+++|+|.|.+|+||
T Consensus       631 ~~FaTaSRDK~VkVW  645 (764)
T KOG1063|consen  631 KYFATASRDKKVKVW  645 (764)
T ss_pred             ceeEEecCCceEEEE
Confidence            999999999999998

>KOG0273|consensus

Probab=100.00  E-value=2.9e-35  Score=256.90  Aligned_cols=327  Identities=17%  Similarity=0.220  Sum_probs=255.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCc------ccee---------eeeccccccceeeeEeecCccccccCCc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS------RKQL---------RSYPAYESLETCAVFHLSDETESKSGGK   67 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (537)
                      ..|.+.++.|. ....+++++.+-+.++|++..      .+.+         +..+....++++  .+..        ++
T Consensus       179 ~~V~~~~WnP~-~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L--~Wn~--------~G  247 (524)
T KOG0273|consen  179 SEVFICAWNPL-RDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSL--DWNN--------DG  247 (524)
T ss_pred             CceEEEecCch-hhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceE--EecC--------CC
Confidence            45889999963 334788899999999999875      1111         122233455666  4444        77


Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      .+|++|..+|.+++|+.. |.++.++..| ++|.++.|+.+|+||++++.|+++.+||..+           ++..+.+.
T Consensus       248 ~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~-----------g~~~q~f~  315 (524)
T KOG0273|consen  248 TLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT-----------GTVKQQFE  315 (524)
T ss_pred             CeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC-----------ceEEEeee
Confidence            999999999999999965 5666666644 7999999999999999999999999999999           78888888


Q ss_pred             cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDE  224 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~  224 (537)
                      -|..+-..+.|- . ...+++.+.++.    |                 +++.+       ......  +.     ||  
T Consensus       316 ~~s~~~lDVdW~-~-~~~F~ts~td~~----i-----------------~V~kv-------~~~~P~~t~~-----GH--  358 (524)
T KOG0273|consen  316 FHSAPALDVDWQ-S-NDEFATSSTDGC----I-----------------HVCKV-------GEDRPVKTFI-----GH--  358 (524)
T ss_pred             eccCCccceEEe-c-CceEeecCCCce----E-----------------EEEEe-------cCCCcceeee-----cc--
Confidence            888876788896 3 344556555555    7                 66666       434433  66     99  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      .++|.++   .|+|.|.+|++++.|++++  +|......    +                                    
T Consensus       359 ~g~V~al---k~n~tg~LLaS~SdD~Tlk--iWs~~~~~----~------------------------------------  393 (524)
T KOG0273|consen  359 HGEVNAL---KWNPTGSLLASCSDDGTLK--IWSMGQSN----S------------------------------------  393 (524)
T ss_pred             cCceEEE---EECCCCceEEEecCCCeeE--eeecCCCc----c------------------------------------
Confidence            9999999   9999999999999999999  99876621    0                                    


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                              ...+..|...|..+.|+|+|..           .|+.             ..+..+++++.|++|++||+..
T Consensus       394 --------~~~l~~Hskei~t~~wsp~g~v-----------~~n~-------------~~~~~l~sas~dstV~lwdv~~  441 (524)
T KOG0273|consen  394 --------VHDLQAHSKEIYTIKWSPTGPV-----------TSNP-------------NMNLMLASASFDSTVKLWDVES  441 (524)
T ss_pred             --------hhhhhhhccceeeEeecCCCCc-----------cCCC-------------cCCceEEEeecCCeEEEEEccC
Confidence                    2335678889999999997641           0111             1244566667777777777777


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                      +.++.++..|..                 +|.+++|+|+|+++|+|+.||.|.+|++++++..+.+.+ .+.|..++|+.
T Consensus       442 gv~i~~f~kH~~-----------------pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~  503 (524)
T KOG0273|consen  442 GVPIHTLMKHQE-----------------PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNA  503 (524)
T ss_pred             CceeEeeccCCC-----------------ceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcC
Confidence            777777776665                 888899999999999999999999999999999999985 45699999999


Q ss_pred             CCCEEEEEeCCCcEEEEECC
Q psy10942        465 KGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~  484 (537)
                      +|.+|..+-.|+.+++-|++
T Consensus       504 ~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  504 AGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             CCCEEEEEecCCCceEEEec
Confidence            99999999999999999875

>KOG0293|consensus

Probab=100.00  E-value=4.7e-36  Score=257.41  Aligned_cols=281  Identities=12%  Similarity=0.174  Sum_probs=234.7

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ++|.-+.||++|+|||+++.|.+..+|.+.....        .++.+++.+|..+|.-+.|+ ||+++|++++.+..   
T Consensus       225 dEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~--------~kl~~tlvgh~~~V~yi~wS-PDdryLlaCg~~e~---  292 (519)
T KOG0293|consen  225 DEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH--------FKLKKTLVGHSQPVSYIMWS-PDDRYLLACGFDEV---  292 (519)
T ss_pred             CcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc--------eeeeeeeecccCceEEEEEC-CCCCeEEecCchHh---
Confidence            7999999999999999999999999999876422        67889999999999999999 88899999998888   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       +                 ++||+       .++.+. +.   ..++  ...+.+.   +|.|||..+++|+.|+.+.  
T Consensus       293 -~-----------------~lwDv-------~tgd~~~~y---~~~~--~~S~~sc---~W~pDg~~~V~Gs~dr~i~--  337 (519)
T KOG0293|consen  293 -L-----------------SLWDV-------DTGDLRHLY---PSGL--GFSVSSC---AWCPDGFRFVTGSPDRTII--  337 (519)
T ss_pred             -e-----------------eeccC-------Ccchhhhhc---ccCc--CCCccee---EEccCCceeEecCCCCcEE--
Confidence             9                 99999       998888 33   0134  5788888   9999999999999999999  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      .|+++..                                 .+.-|.-..               ...|.+++.++||+++
T Consensus       338 ~wdlDgn---------------------------------~~~~W~gvr---------------~~~v~dlait~Dgk~v  369 (519)
T KOG0293|consen  338 MWDLDGN---------------------------------ILGNWEGVR---------------DPKVHDLAITYDGKYV  369 (519)
T ss_pred             EecCCcc---------------------------------hhhcccccc---------------cceeEEEEEcCCCcEE
Confidence            9998873                                 122222111               1348899999999999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      ++.+.|..|++++.. .......+..+                                .                  +|
T Consensus       370 l~v~~d~~i~l~~~e-~~~dr~lise~--------------------------------~------------------~i  398 (519)
T KOG0293|consen  370 LLVTVDKKIRLYNRE-ARVDRGLISEE--------------------------------Q------------------PI  398 (519)
T ss_pred             EEEecccceeeechh-hhhhhcccccc--------------------------------C------------------ce
Confidence            999999999999987 32222211111                                1                  88


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc--eEEEEEec-CCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS--VLRCHFIN-KGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ++++.|.|++++++.-.+..+++||++..+.+..+.||...  +..-+|-. +..++++|++|+.|+||+..+|+++..+
T Consensus       399 ts~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L  478 (519)
T KOG0293|consen  399 TSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL  478 (519)
T ss_pred             eEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee
Confidence            99999999999999999999999999999999999998764  44445644 5689999999999999999999999999


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCC-EEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSD-CEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~-~l~s~~~dg~i~vW  537 (537)
                      .||...|           .++   +|+|... ++|+||+||+||||
T Consensus       479 sGHs~~v-----------NcV---swNP~~p~m~ASasDDgtIRIW  510 (519)
T KOG0293|consen  479 SGHSKTV-----------NCV---SWNPADPEMFASASDDGTIRIW  510 (519)
T ss_pred             cCCccee-----------eEE---ecCCCCHHHhhccCCCCeEEEe
Confidence            9999988           888   9999765 78999999999999

>KOG0263|consensus

Probab=100.00  E-value=2.2e-35  Score=274.18  Aligned_cols=260  Identities=23%  Similarity=0.359  Sum_probs=221.8

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +..+++.|-.|..|++|.+... .+..++....+.         .+=+.+.|-.+...|..+           ....+++
T Consensus       389 dssmlA~Gf~dS~i~~~Sl~p~-kl~~lk~~~~l~---------~~d~~sad~~~~~~D~~~-----------~~~~~~L  447 (707)
T KOG0263|consen  389 DSSMLACGFVDSSVRVWSLTPK-KLKKLKDASDLS---------NIDTESADVDVDMLDDDS-----------SGTSRTL  447 (707)
T ss_pred             CcchhhccccccEEEEEecchh-hhccccchhhhc---------cccccccchhhhhccccC-----------CceeEEe
Confidence            7789999999999999998754 344444322221         222344455567777776           5667789


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRD  223 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~  223 (537)
                      .||.++|....|+ |+.++|++++.|..    +                 |+|.+       .+..+.  .+     || 
T Consensus       448 ~GH~GPVyg~sFs-Pd~rfLlScSED~s----v-----------------RLWsl-------~t~s~~V~y~-----GH-  492 (707)
T KOG0263|consen  448 YGHSGPVYGCSFS-PDRRFLLSCSEDSS----V-----------------RLWSL-------DTWSCLVIYK-----GH-  492 (707)
T ss_pred             ecCCCceeeeeec-ccccceeeccCCcc----e-----------------eeeec-------ccceeEEEec-----CC-
Confidence            9999999999999 88899999998888    9                 99999       888888  77     99 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                       ..+|..+   .|+|-|-|||+++.|++.+  +|..+..                                         
T Consensus       493 -~~PVwdV---~F~P~GyYFatas~D~tAr--LWs~d~~-----------------------------------------  525 (707)
T KOG0263|consen  493 -LAPVWDV---QFAPRGYYFATASHDQTAR--LWSTDHN-----------------------------------------  525 (707)
T ss_pred             -CcceeeE---EecCCceEEEecCCCceee--eeecccC-----------------------------------------
Confidence             9999999   9999999999999999999  8887661                                         


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                        ..     .+.+.+|.+.|.|+.|+|+..++++|+.|.++++||.. ++..++.+.+|..                   
T Consensus       526 --~P-----lRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~-~G~~VRiF~GH~~-------------------  578 (707)
T KOG0263|consen  526 --KP-----LRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS-TGNSVRIFTGHKG-------------------  578 (707)
T ss_pred             --Cc-----hhhhcccccccceEEECCcccccccCCCCceEEEEEcC-CCcEEEEecCCCC-------------------
Confidence              11     44567889999999999999999999999999999998 6666666666655                   


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                                                    +|.+++|||+|++|++|+.||.|.+||+.+++++..+.+|.+.|.++.||
T Consensus       579 ------------------------------~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS  628 (707)
T KOG0263|consen  579 ------------------------------PVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFS  628 (707)
T ss_pred             ------------------------------ceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEe
Confidence                                          89999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEEeCCCcEEEEECCC
Q psy10942        464 NKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       464 ~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      .+|..||+++.|++|++||+..
T Consensus       629 ~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  629 RDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             cCCCEEEecCCCCeEEEEEchh
Confidence            9999999999999999999864

>KOG0292|consensus

Probab=100.00  E-value=5.4e-33  Score=260.47  Aligned_cols=335  Identities=13%  Similarity=0.144  Sum_probs=260.5

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      .|-.++|+  |...+++++-..|+|++||.+=+.++..+. |..++..+  .+.|        .++++++||.|-.|+||
T Consensus        11 RvKglsFH--P~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv--~FH~--------~qplFVSGGDDykIkVW   78 (1202)
T KOG0292|consen   11 RVKGLSFH--PKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGV--DFHP--------TQPLFVSGGDDYKIKVW   78 (1202)
T ss_pred             cccceecC--CCCCEEEEeecCceeeeehhhhhhHHhhhhccCCcccee--eecC--------CCCeEEecCCccEEEEE
Confidence            57789999  888999999999999999999999999887 77788999  6688        77999999999999999


Q ss_pred             eccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         83 ETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        83 d~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                      +..+.+++.++.+| +.|..+.|.+.-.++++++.|.+|+||+..+           ..++..++||...|.|..|+ |.
T Consensus        79 nYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs-----------r~~iavltGHnHYVMcAqFh-pt  146 (1202)
T KOG0292|consen   79 NYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS-----------RKCIAVLTGHNHYVMCAQFH-PT  146 (1202)
T ss_pred             ecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC-----------CceEEEEecCceEEEeeccC-Cc
Confidence            99999999999988 7999999999999999999999999999999           89999999999999999999 66


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc-ccc-------------------ccccccccccc
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK-QSS-------------------SQQKHNTERLG  221 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~-~~~-------------------~~~l~~~~~~~  221 (537)
                      +..+++++-+..    |                 |+||+..-.+-. ..+                   .++ -...+.|
T Consensus       147 EDlIVSaSLDQT----V-----------------RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaV-VK~VLEG  204 (1202)
T KOG0292|consen  147 EDLIVSASLDQT----V-----------------RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAV-VKHVLEG  204 (1202)
T ss_pred             cceEEEecccce----E-----------------EEEeecchhccCCCCCCchhhhhccccchhhcCCcCee-eeeeecc
Confidence            778889998888    9                 999883221100 000                   111 0111339


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc------eEEEEEeC
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV------ELLASGSL  293 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v------~~l~~~~~  293 (537)
                      |  ...|.-+   +|+|.-..+++|++|+.++  +|+.....  ...     ..+..+|.+  .++      +++++.++
T Consensus       205 H--DRGVNwa---AfhpTlpliVSG~DDRqVK--lWrmnetK--aWE-----vDtcrgH~nnVssvlfhp~q~lIlSnsE  270 (1202)
T KOG0292|consen  205 H--DRGVNWA---AFHPTLPLIVSGADDRQVK--LWRMNETK--AWE-----VDTCRGHYNNVSSVLFHPHQDLILSNSE  270 (1202)
T ss_pred             c--ccccceE---EecCCcceEEecCCcceee--EEEecccc--cee-----ehhhhcccCCcceEEecCccceeEecCC
Confidence            9  8999999   9999999999999999999  99987632  111     344455554  222      78999999


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcC
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGA  373 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~  373 (537)
                      |++|++||+.....+     ..++...+....++-+|..++++.|. |+-+.+|.+. ...+...+.    ++.++-.- 
T Consensus       271 DksirVwDm~kRt~v-----~tfrrendRFW~laahP~lNLfAAgH-DsGm~VFkle-RErpa~~v~----~n~LfYvk-  338 (1202)
T KOG0292|consen  271 DKSIRVWDMTKRTSV-----QTFRRENDRFWILAAHPELNLFAAGH-DSGMIVFKLE-RERPAYAVN----GNGLFYVK-  338 (1202)
T ss_pred             CccEEEEecccccce-----eeeeccCCeEEEEEecCCcceeeeec-CCceEEEEEc-ccCceEEEc----CCEEEEEc-
Confidence            999999999987763     34445567789999999999888765 5668888887 444444332    23333333 


Q ss_pred             CCcEEEEECCCCeee--eeeccC---CcceEEEEEecCCCce
Q psy10942        374 DGLLKLWSIKTSTCV--STFDKH---ALKIWTLAITKDENQI  410 (537)
Q Consensus       374 d~~i~i~d~~~~~~~--~~~~~~---~~~i~~~~~~~~~~~~  410 (537)
                      |..|+.+|+++.+..  ..+...   ..+..++.++|....+
T Consensus       339 d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~v  380 (1202)
T KOG0292|consen  339 DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAV  380 (1202)
T ss_pred             cceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeE
Confidence            888999999885432  222222   3566677777765443

>KOG0265|consensus

Probab=100.00  E-value=2.2e-33  Score=231.50  Aligned_cols=282  Identities=18%  Similarity=0.306  Sum_probs=233.4

Q ss_pred             hcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942         92 QHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus        92 ~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                      .+.+| +.|..+.|+|+|.+||+|+.|..|.+|++...          -+-...+++|.+.|..+.|. .+++.+++++.
T Consensus        42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gd----------ceN~~~lkgHsgAVM~l~~~-~d~s~i~S~gt  110 (338)
T KOG0265|consen   42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGD----------CENFWVLKGHSGAVMELHGM-RDGSHILSCGT  110 (338)
T ss_pred             hcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccc----------ccceeeeccccceeEeeeec-cCCCEEEEecC
Confidence            33444 69999999999999999999999999997764          44566788999999999999 89999999999


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                      ++.    +                 +.||.       +++++.  ++     +|  ..-|.++   ..+.-|.       
T Consensus       111 Dk~----v-----------------~~wD~-------~tG~~~rk~k-----~h--~~~vNs~---~p~rrg~-------  145 (338)
T KOG0265|consen  111 DKT----V-----------------RGWDA-------ETGKRIRKHK-----GH--TSFVNSL---DPSRRGP-------  145 (338)
T ss_pred             Cce----E-----------------EEEec-------ccceeeehhc-----cc--cceeeec---CccccCC-------
Confidence            988    9                 99999       999988  77     99  8888888   5332232       


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                                                           .++.+++.|+++++||+++.....      .....-+++++.|
T Consensus       146 -------------------------------------~lv~SgsdD~t~kl~D~R~k~~~~------t~~~kyqltAv~f  182 (338)
T KOG0265|consen  146 -------------------------------------QLVCSGSDDGTLKLWDIRKKEAIK------TFENKYQLTAVGF  182 (338)
T ss_pred             -------------------------------------eEEEecCCCceEEEEeecccchhh------ccccceeEEEEEe
Confidence                                                 134445555555566655444321      1122456899999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      ..++..+++|+-|+.|++||++ .......+.+|.+                                            
T Consensus       183 ~d~s~qv~sggIdn~ikvWd~r-~~d~~~~lsGh~D--------------------------------------------  217 (338)
T KOG0265|consen  183 KDTSDQVISGGIDNDIKVWDLR-KNDGLYTLSGHAD--------------------------------------------  217 (338)
T ss_pred             cccccceeeccccCceeeeccc-cCcceEEeecccC--------------------------------------------
Confidence            9999999999999999999998 6777777777776                                            


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC----ceeeeEeecCCc----ceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD----YVCLKSLEGHDA----SVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                           .|+.+..+|+|.++.+-+.|.++++||++.    ..++..+.+|.-    ....++|+|+++.+.+++.|..+++
T Consensus       218 -----tIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyv  292 (338)
T KOG0265|consen  218 -----TITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYV  292 (338)
T ss_pred             -----ceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEE
Confidence                 899999999999999999999999999875    345777777542    3567899999999999999999999


Q ss_pred             EECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        481 WSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       481 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ||......+..+.+|.+.|           ..+   +|+|....|.+++.|.+|.+
T Consensus       293 wd~~~r~~lyklpGh~gsv-----------n~~---~Fhp~e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  293 WDTTSRRILYKLPGHYGSV-----------NEV---DFHPTEPIILSCSSDKTIYL  334 (338)
T ss_pred             eecccccEEEEcCCcceeE-----------EEe---eecCCCcEEEEeccCceeEe
Confidence            9998889999999999999           888   99999999999999999875

>KOG0285|consensus

Probab=100.00  E-value=7.9e-34  Score=239.42  Aligned_cols=283  Identities=20%  Similarity=0.304  Sum_probs=239.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ++|.++++.|..+++++|+.|++|.|||+.+           +++.-++.||-..|..++++ +...+++++..++.   
T Consensus       152 gWVr~vavdP~n~wf~tgs~DrtikIwDlat-----------g~LkltltGhi~~vr~vavS-~rHpYlFs~gedk~---  216 (460)
T KOG0285|consen  152 GWVRSVAVDPGNEWFATGSADRTIKIWDLAT-----------GQLKLTLTGHIETVRGVAVS-KRHPYLFSAGEDKQ---  216 (460)
T ss_pred             ceEEEEeeCCCceeEEecCCCceeEEEEccc-----------CeEEEeecchhheeeeeeec-ccCceEEEecCCCe---
Confidence            7999999999999999999999999999999           79999999999999999999 77788988888887   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 +.||+       +..+.+  +.     ||  -..|.|+   +.+|.-+.|++|+.|.+++ 
T Consensus       217 -V-----------------KCwDL-------e~nkvIR~Yh-----GH--lS~V~~L---~lhPTldvl~t~grDst~R-  260 (460)
T KOG0285|consen  217 -V-----------------KCWDL-------EYNKVIRHYH-----GH--LSGVYCL---DLHPTLDVLVTGGRDSTIR-  260 (460)
T ss_pred             -e-----------------EEEec-------hhhhhHHHhc-----cc--cceeEEE---eccccceeEEecCCcceEE-
Confidence             9                 99999       777776  88     99  9999999   9999888888888877777 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +||++.                                           ...     ...+.+|..+|..+.+.|-...
T Consensus       261 -vWDiRt-------------------------------------------r~~-----V~~l~GH~~~V~~V~~~~~dpq  291 (460)
T KOG0285|consen  261 -VWDIRT-------------------------------------------RAS-----VHVLSGHTNPVASVMCQPTDPQ  291 (460)
T ss_pred             -Eeeecc-------------------------------------------cce-----EEEecCCCCcceeEEeecCCCc
Confidence             777665                                           222     3345789999999999998889


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++|+.|++|++||+. .++....+..|..                                                 .
T Consensus       292 vit~S~D~tvrlWDl~-agkt~~tlt~hkk-------------------------------------------------s  321 (460)
T KOG0285|consen  292 VITGSHDSTVRLWDLR-AGKTMITLTHHKK-------------------------------------------------S  321 (460)
T ss_pred             eEEecCCceEEEeeec-cCceeEeeecccc-------------------------------------------------e
Confidence            9999999999999999 6666666666655                                                 7


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      +.+++.+|....+|+++.| .|+-|++..++.+..+.+|...|++++...|+ ++++|++.|.+.+||.++|-..+.++.
T Consensus       322 vral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t  399 (460)
T KOG0285|consen  322 VRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQT  399 (460)
T ss_pred             eeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccc
Confidence            8889999999999999886 69999999999999999999999999998876 899999999999999999876655521


Q ss_pred             CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        495 HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       495 ~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      -   +..-....+...++.   +|...|..|+++..|.+|++|
T Consensus       400 ~---vqpGSl~sEagI~as---~fDktg~rlit~eadKtIk~~  436 (460)
T KOG0285|consen  400 I---VQPGSLESEAGIFAS---CFDKTGSRLITGEADKTIKMY  436 (460)
T ss_pred             c---ccCCccccccceeEE---eecccCceEEeccCCcceEEE
Confidence            1   100011111112666   899999999999999999998

>KOG0296|consensus

Probab=100.00  E-value=7.5e-33  Score=234.33  Aligned_cols=328  Identities=13%  Similarity=0.172  Sum_probs=261.1

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      .|-++..+  |+.++++|||.|..-.+|++.+|.....++ +.+.+.++.|  +.        ++.+|+||+-+|.|.||
T Consensus        66 svFavsl~--P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~F--sh--------dgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   66 SVFAVSLH--PNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSF--SH--------DGTLLATGDMSGKVLVF  133 (399)
T ss_pred             ceEEEEeC--CCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEE--cc--------CceEEEecCCCccEEEE
Confidence            45677777  688999999999999999999999888877 7778888844  55        77999999999999999


Q ss_pred             eccceehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         83 ETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        83 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                      ...++.....+. .-+.|.=+.|.|.+..|++|+.||.+..|.+..           +...+.+.||..++++=.|. |+
T Consensus       134 ~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~-----------~~~~kv~~Gh~~~ct~G~f~-pd  201 (399)
T KOG0296|consen  134 KVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS-----------QALCKVMSGHNSPCTCGEFI-PD  201 (399)
T ss_pred             EcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCC-----------cceeeEecCCCCCccccccc-CC
Confidence            999998888876 336788899999999999999999999999998           67889999999999999999 67


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCC
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED  241 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~  241 (537)
                      ++.++.+..++.    |                 ++||.       .+++.....    ...+.....++   .++.++.
T Consensus       202 GKr~~tgy~dgt----i-----------------~~Wn~-------ktg~p~~~~----~~~e~~~~~~~---~~~~~~~  246 (399)
T KOG0296|consen  202 GKRILTGYDDGT----I-----------------IVWNP-------KTGQPLHKI----TQAEGLELPCI---SLNLAGS  246 (399)
T ss_pred             CceEEEEecCce----E-----------------EEEec-------CCCceeEEe----cccccCcCCcc---ccccccc
Confidence            899988888777    9                 99999       888777220    11113456777   8899999


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      .++.|..++.+.  +-+...+                                 .+..-...+.       ......+..
T Consensus       247 ~~~~g~~e~~~~--~~~~~sg---------------------------------KVv~~~n~~~-------~~l~~~~e~  284 (399)
T KOG0296|consen  247 TLTKGNSEGVAC--GVNNGSG---------------------------------KVVNCNNGTV-------PELKPSQEE  284 (399)
T ss_pred             eeEeccCCccEE--EEccccc---------------------------------eEEEecCCCC-------ccccccchh
Confidence            999999998887  5444442                                 2222111111       111223334


Q ss_pred             CeEEEE---EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        322 DINCVT---VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       322 ~v~~~~---~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      .+.++.   ++..-.+.|+|+-||+|.|||+. .. .++..-.|+.                                  
T Consensus       285 ~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a-~~-~~R~~c~he~----------------------------------  328 (399)
T KOG0296|consen  285 LDESVESIPSSSKLPLAACGSVDGTIAIYDLA-AS-TLRHICEHED----------------------------------  328 (399)
T ss_pred             hhhhhhhcccccccchhhcccccceEEEEecc-cc-hhheeccCCC----------------------------------
Confidence            444444   44456678899999999999987 32 2233333333                                  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcE
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLL  478 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  478 (537)
                                     +|..+.|-+ ..+|++++.||.|+.||.++|+++.++.+|...|.+++++|+.++++|+|.|++.
T Consensus       329 ---------------~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a  392 (399)
T KOG0296|consen  329 ---------------GVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTA  392 (399)
T ss_pred             ---------------ceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeE
Confidence                           788888888 7899999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECC
Q psy10942        479 KLWSIK  484 (537)
Q Consensus       479 ~vwd~~  484 (537)
                      +||+..
T Consensus       393 ~VF~v~  398 (399)
T KOG0296|consen  393 LVFEVP  398 (399)
T ss_pred             EEEecC
Confidence            999874

>KOG0645|consensus

Probab=100.00  E-value=3.6e-33  Score=226.90  Aligned_cols=286  Identities=17%  Similarity=0.211  Sum_probs=223.3

Q ss_pred             hhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhhhcccCCCccEEE
Q psy10942         91 YQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        91 ~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      +.++++ +.+..++|+|- |..||+++.|+.|++|+...+..        ..+...+ .+|...|.+++|+ |.+++|++
T Consensus         8 ~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s--------~~ck~vld~~hkrsVRsvAws-p~g~~La~   78 (312)
T KOG0645|consen    8 QKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDS--------WTCKTVLDDGHKRSVRSVAWS-PHGRYLAS   78 (312)
T ss_pred             EeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCc--------EEEEEeccccchheeeeeeec-CCCcEEEE
Confidence            344444 57999999998 88999999999999999884211        4444444 4689999999999 78889999


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++-+..    +                 .||.-     .....++.  ++     ||  ...|.|+   +|+++|++||+
T Consensus        79 aSFD~t----~-----------------~Iw~k-----~~~efecv~~lE-----GH--EnEVK~V---aws~sG~~LAT  122 (312)
T KOG0645|consen   79 ASFDAT----V-----------------VIWKK-----EDGEFECVATLE-----GH--ENEVKCV---AWSASGNYLAT  122 (312)
T ss_pred             eeccce----E-----------------EEeec-----CCCceeEEeeee-----cc--ccceeEE---EEcCCCCEEEE
Confidence            888877    7                 78865     11334555  88     99  9999999   99999999999


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      ++.|+.+-  +|.+..+. ...|                                            ...+..|...|..
T Consensus       123 CSRDKSVW--iWe~dedd-Efec--------------------------------------------~aVL~~HtqDVK~  155 (312)
T KOG0645|consen  123 CSRDKSVW--IWEIDEDD-EFEC--------------------------------------------IAVLQEHTQDVKH  155 (312)
T ss_pred             eeCCCeEE--EEEecCCC-cEEE--------------------------------------------EeeeccccccccE
Confidence            99999999  99988521 1111                                            3446788999999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccC--CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTG--GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      +.|+|...+|++++.|++|++|+-..  ...+..++.+|..                                       
T Consensus       156 V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~---------------------------------------  196 (312)
T KOG0645|consen  156 VIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN---------------------------------------  196 (312)
T ss_pred             EEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccc---------------------------------------
Confidence            99999999999999999999998661  2233444444433                                       


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                                .+.+++|+|.|..|++++.|++++||.+.+.    .-..|...++.+.|.  ...|++++.|+.|++|.-
T Consensus       197 ----------TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~----~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~  260 (312)
T KOG0645|consen  197 ----------TVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD----LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKE  260 (312)
T ss_pred             ----------eEEEEEecCCCceEEEecCCcceEeeeeccC----cchhcccceEeeeec--ccceEeccCCCEEEEEEe
Confidence                      7888999999999999999999999986531    112377889999998  458999999999999986


Q ss_pred             CCC------eeEE-EecCCccceeccCCCCCCccccccceeeecC-CCEEEEEeCCCCEEeC
Q psy10942        484 KTS------TCVS-TFDKHALKIRNSDSENDHKGFGLPRQLCSRN-SDCEYRGGWSPQVVVY  537 (537)
Q Consensus       484 ~~~------~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~-~~~l~s~~~dg~i~vW  537 (537)
                      ...      +++. .-..|...|           +++   +|.|. .++|+++++||.|++|
T Consensus       261 s~~~d~p~~~l~~~~~~aHe~dV-----------NsV---~w~p~~~~~L~s~~DDG~v~~W  308 (312)
T KOG0645|consen  261 SDSPDEPSWNLLAKKEGAHEVDV-----------NSV---QWNPKVSNRLASGGDDGIVNFW  308 (312)
T ss_pred             cCCCCCchHHHHHhhhccccccc-----------ceE---EEcCCCCCceeecCCCceEEEE
Confidence            542      1111 223577777           788   99995 7899999999999998

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1e-32  Score=253.65  Aligned_cols=279  Identities=24%  Similarity=0.381  Sum_probs=234.6

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.+.|.+++|+|++++|++++.|+.+++|++.+           .+....+..|...+..+.|+ ++++.+++++.++. 
T Consensus         8 h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~-----------~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~-   74 (289)
T cd00200           8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLET-----------GELLRTLKGHTGPVRDVAAS-ADGTYLASGSSDKT-   74 (289)
T ss_pred             cCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeC-----------CCcEEEEecCCcceeEEEEC-CCCCEEEEEcCCCe-
Confidence            347899999999999999999999999999998           56777888898888899999 66678888877666 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         +                 ++|++       ...+..  +.     .|  ...+.++   .|+++++++++++.++.+
T Consensus        75 ---i-----------------~i~~~-------~~~~~~~~~~-----~~--~~~i~~~---~~~~~~~~~~~~~~~~~i  117 (289)
T cd00200          75 ---I-----------------RLWDL-------ETGECVRTLT-----GH--TSYVSSV---AFSPDGRILSSSSRDKTI  117 (289)
T ss_pred             ---E-----------------EEEEc-------CcccceEEEe-----cc--CCcEEEE---EEcCCCCEEEEecCCCeE
Confidence               9                 99999       664444  56     78  8899999   999988777777777777


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      .  +|++..                                           .+.     ...+..|...+.+++|+|++
T Consensus       118 ~--~~~~~~-------------------------------------------~~~-----~~~~~~~~~~i~~~~~~~~~  147 (289)
T cd00200         118 K--VWDVET-------------------------------------------GKC-----LTTLRGHTDWVNSVAFSPDG  147 (289)
T ss_pred             E--EEECCC-------------------------------------------cEE-----EEEeccCCCcEEEEEEcCcC
Confidence            7  777654                                           111     11123567789999999999


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      +++++++.|+.+++||++ ..+.+..+..+..                                                
T Consensus       148 ~~l~~~~~~~~i~i~d~~-~~~~~~~~~~~~~------------------------------------------------  178 (289)
T cd00200         148 TFVASSSQDGTIKLWDLR-TGKCVATLTGHTG------------------------------------------------  178 (289)
T ss_pred             CEEEEEcCCCcEEEEEcc-ccccceeEecCcc------------------------------------------------
Confidence            898888889999999997 4444444433322                                                


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                       .+.+++|+|+++.+++++.++.|++||+.+++.+..+..|...+.++.|+|++.++++++.||.|++|++.+++.+..+
T Consensus       179 -~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~  257 (289)
T cd00200         179 -EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTL  257 (289)
T ss_pred             -ccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEc
Confidence             7888999999999999999999999999999999999889999999999999888888888999999999999999999


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..|...+           .++   +|+|++++|++++.||.+++|
T Consensus       258 ~~~~~~i-----------~~~---~~~~~~~~l~~~~~d~~i~iw  288 (289)
T cd00200         258 SGHTNSV-----------TSL---AWSPDGKRLASGSADGTIRIW  288 (289)
T ss_pred             cccCCcE-----------EEE---EECCCCCEEEEecCCCeEEec
Confidence            9998888           888   999999999999999999999

>KOG0266|consensus

Probab=100.00  E-value=1.4e-33  Score=270.22  Aligned_cols=279  Identities=22%  Similarity=0.332  Sum_probs=238.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccc--eeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILK--FRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      ..|.++.|+++|++|++++.++.+++|+..+           ..  ..+.+.+|...|.+++|+ +++.+++.++.+.. 
T Consensus       160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~-----------~~~~~~~~l~~h~~~v~~~~fs-~d~~~l~s~s~D~t-  226 (456)
T KOG0266|consen  160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEG-----------IKSNLLRELSGHTRGVSDVAFS-PDGSYLLSGSDDKT-  226 (456)
T ss_pred             CceEEEEEcCCCCeEEEccCCCcEEEeeccc-----------ccchhhccccccccceeeeEEC-CCCcEEEEecCCce-
Confidence            5799999999999999999999999999976           34  667779999999999999 78888888888887 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPS  251 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~  251 (537)
                         +                 ++||+       +.. .++  ++     +|  ...|+++   +|+|+++++++|+.|++
T Consensus       227 ---i-----------------riwd~-------~~~~~~~~~l~-----gH--~~~v~~~---~f~p~g~~i~Sgs~D~t  269 (456)
T KOG0266|consen  227 ---L-----------------RIWDL-------KDDGRNLKTLK-----GH--STYVTSV---AFSPDGNLLVSGSDDGT  269 (456)
T ss_pred             ---E-----------------EEeec-------cCCCeEEEEec-----CC--CCceEEE---EecCCCCEEEEecCCCc
Confidence               9                 99999       555 333  77     99  9999999   99999999999998888


Q ss_pred             ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC
Q psy10942        252 TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN  331 (537)
Q Consensus       252 i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  331 (537)
                      |+  +|++..                                           ++.     ...+.+|...|++++|+++
T Consensus       270 vr--iWd~~~-------------------------------------------~~~-----~~~l~~hs~~is~~~f~~d  299 (456)
T KOG0266|consen  270 VR--IWDVRT-------------------------------------------GEC-----VRKLKGHSDGISGLAFSPD  299 (456)
T ss_pred             EE--EEeccC-------------------------------------------CeE-----EEeeeccCCceEEEEECCC
Confidence            88  777765                                           222     4456789999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEccCCce--eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGLK--LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      +++|++++.|+.|++||+. .+.  +...+..+..                                .            
T Consensus       300 ~~~l~s~s~d~~i~vwd~~-~~~~~~~~~~~~~~~--------------------------------~------------  334 (456)
T KOG0266|consen  300 GNLLVSASYDGTIRVWDLE-TGSKLCLKLLSGAEN--------------------------------S------------  334 (456)
T ss_pred             CCEEEEcCCCccEEEEECC-CCceeeeecccCCCC--------------------------------C------------
Confidence            9999999999999999999 433  2233332221                                0            


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcce---EEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV---LRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                        . .+++++|+|++.+++++..|+.+++||+..+..+..+.+|...+   .+...++.++++++++.|+.|++|++.++
T Consensus       335 --~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~  411 (456)
T KOG0266|consen  335 --A-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG  411 (456)
T ss_pred             --C-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc
Confidence              0 46889999999999999999999999999999999999998753   34455778999999999999999999999


Q ss_pred             eeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEEEEe--CCCCEEeC
Q psy10942        487 TCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG--WSPQVVVY  537 (537)
Q Consensus       487 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~--~dg~i~vW  537 (537)
                      ..+..+.+| ...+           ..+   .++|..+++++++  .|+.+++|
T Consensus       412 ~~~~~l~~h~~~~~-----------~~~---~~~~~~~~~~s~s~~~d~~~~~w  451 (456)
T KOG0266|consen  412 GILQRLEGHSKAAV-----------SDL---SSHPTENLIASSSFEGDGLIRLW  451 (456)
T ss_pred             chhhhhcCCCCCce-----------ecc---ccCCCcCeeeecCcCCCceEEEe
Confidence            999999999 7777           788   9999999999998  79999998

>KOG1539|consensus

Probab=100.00  E-value=8.9e-33  Score=257.66  Aligned_cols=425  Identities=12%  Similarity=0.128  Sum_probs=327.6

Q ss_pred             CcceEEEecCcceEEEEEcCcc-cee----eeeccccc-cceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSR-KQL----RSYPAYES-LETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK   88 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~-~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~   88 (537)
                      =|.+++++..++.+.||+..++ .++    ...+.... |++   +++|.+      --+-++.|+.+|.+.+|++.+++
T Consensus       123 fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ita---l~HP~T------YLNKIvvGs~~G~lql~Nvrt~K  193 (910)
T KOG1539|consen  123 FGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITA---LLHPST------YLNKIVVGSSQGRLQLWNVRTGK  193 (910)
T ss_pred             ecceEEEEEccCcEEEEEeccccccccccceeeeccCCceee---Eecchh------heeeEEEeecCCcEEEEEeccCc
Confidence            4578899999999999999884 221    12222222 333   345543      44678899999999999999999


Q ss_pred             hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE-E
Q psy10942         89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI-V  166 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~  166 (537)
                      .+++++.. ..|+++.=+|-=..+|+|..+|+|.++++..           .+.+..++...+.|++++|. .|++.+ +
T Consensus       194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~-----------dkil~sFk~d~g~VtslSFr-tDG~p~la  261 (910)
T KOG1539|consen  194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKF-----------DKILMSFKQDWGRVTSLSFR-TDGNPLLA  261 (910)
T ss_pred             EEEEecccccceeEeccCCcceEEEEeccCceEEEEEccc-----------CcEEEEEEccccceeEEEec-cCCCeeEE
Confidence            99999976 6999999999999999999999999999999           68888888656899999999 555554 4


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      ++...++    +                 .+||+       +..+..   ..     .|  .+.|...   .|-|....+
T Consensus       262 s~~~~G~----m-----------------~~wDL-------e~kkl~~v~~n-----ah--~~sv~~~---~fl~~epVl  303 (910)
T KOG1539|consen  262 SGRSNGD----M-----------------AFWDL-------EKKKLINVTRN-----AH--YGSVTGA---TFLPGEPVL  303 (910)
T ss_pred             eccCCce----E-----------------EEEEc-------CCCeeeeeeec-----cc--cCCcccc---eecCCCceE
Confidence            4444455    8                 99999       665555   33     78  8889998   899999999


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-------eEEEEEeCCCeEEEEECCCCceeeeeec-
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-------ELLASGSLDKTVKVWSTTGGLKLLNVLR-  313 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~~~~~~~~~~~~-  313 (537)
                      ++++.|..++  +|-.+.+....+.     ++.-.+|..  .++       ..+.+++.|++.+.+++........... 
T Consensus       304 ~ta~~DnSlk--~~vfD~~dg~pR~-----LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~  376 (910)
T KOG1539|consen  304 VTAGADNSLK--VWVFDSGDGVPRL-----LRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQL  376 (910)
T ss_pred             eeccCCCcee--EEEeeCCCCcchh-----eeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhccc
Confidence            9999999999  8877765544444     455555555  222       6788999999999887643221111000 


Q ss_pred             ------------ccccccCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEEccCCceeeE---------------EEEe
Q psy10942        314 ------------GHKKGHEKDINCVTVSPN-----DKLLASGSLDKTVKVWSTTGGLKLLN---------------VLRG  361 (537)
Q Consensus       314 ------------~~~~~~~~~v~~~~~s~~-----~~~l~~~~~d~~i~i~d~~~~~~~~~---------------~~~~  361 (537)
                                  ....-.-.+|..+++...     .+.++.--.+...+.|+.+....-..               .+..
T Consensus       377 ~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~v  456 (910)
T KOG1539|consen  377 HNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCV  456 (910)
T ss_pred             ccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEE
Confidence                        011112345667766542     34555556677899999874221122               2222


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeee---ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTF---DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL  438 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i  438 (537)
                      ..-|++.+.|...|.|-+|++++|-....+   ..|..                 +|+.++.+.-++.+++++.+|-+.+
T Consensus       457 s~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~-----------------~V~gla~D~~n~~~vsa~~~Gilkf  519 (910)
T KOG1539|consen  457 SFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKG-----------------EVTGLAVDGTNRLLVSAGADGILKF  519 (910)
T ss_pred             eccCceEEEeccCCeEEEEEcccCeeecccccCccccC-----------------ceeEEEecCCCceEEEccCcceEEE
Confidence            334899999999999999999999888887   35555                 7788888888899999999999999


Q ss_pred             EECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceee
Q psy10942        439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC  518 (537)
Q Consensus       439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  518 (537)
                      ||.++..++..++ -...+..+..+.....++.+..|-.|+++|..+.+.++.+.+|.+.|           +++   +|
T Consensus       520 w~f~~k~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nri-----------td~---~F  584 (910)
T KOG1539|consen  520 WDFKKKVLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRI-----------TDM---TF  584 (910)
T ss_pred             EecCCcceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccce-----------eee---Ee
Confidence            9999988887777 45668889999888899999999999999999999999999999999           999   99


Q ss_pred             ecCCCEEEEEeCCCCEEeC
Q psy10942        519 SRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       519 s~~~~~l~s~~~dg~i~vW  537 (537)
                      ||||++|++++.|++||+|
T Consensus       585 S~DgrWlisasmD~tIr~w  603 (910)
T KOG1539|consen  585 SPDGRWLISASMDSTIRTW  603 (910)
T ss_pred             CCCCcEEEEeecCCcEEEE
Confidence            9999999999999999999

>KOG2106|consensus

Probab=100.00  E-value=4.4e-32  Score=239.03  Aligned_cols=411  Identities=13%  Similarity=0.166  Sum_probs=304.5

Q ss_pred             ceeeeeeeeeccCCcceEEEe--cCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccce
Q psy10942          2 KFCVTCFDVIPQITSEFSVHC--GRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSL   78 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~--~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (537)
                      ...|+|++||+...|.+|...  +.+..+.+||...+......+ ..|.+..+  .+.|.       +.+++++.| ++.
T Consensus       154 ~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a--~FHPt-------d~nliit~G-k~H  223 (626)
T KOG2106|consen  154 DRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLA--TFHPT-------DPNLIITCG-KGH  223 (626)
T ss_pred             cccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEE--EeccC-------CCcEEEEeC-Cce
Confidence            357999999998888888877  556789999999988877666 45556666  56886       667777777 888


Q ss_pred             EEeeeccceehhhhcC---CC--cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         79 LHYYETSAVKELYQHG---LS--SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~---~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                      +.+|+++.+....+..   .+  ..|.+++|.++|+. ++|.++|.|.||+..+           .+..+....|.+.|.
T Consensus       224 ~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdv-iTgDS~G~i~Iw~~~~-----------~~~~k~~~aH~ggv~  291 (626)
T KOG2106|consen  224 LYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDV-ITGDSGGNILIWSKGT-----------NRISKQVHAHDGGVF  291 (626)
T ss_pred             EEEEEccCCceEEEeeccccccceEEEEEEEcCCCCE-EeecCCceEEEEeCCC-----------ceEEeEeeecCCceE
Confidence            9999999886654432   22  57999999999975 5889999999999988           566667779999999


Q ss_pred             hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH--------hhhc-------c--------cc
Q psy10942        154 DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE--------AKFK-------Q--------SS  210 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~--------~~~~-------~--------~~  210 (537)
                      +++.. .++ .|+++..++.    |                 ..||-...        ..+.       .        +.
T Consensus       292 ~L~~l-r~G-tllSGgKDRk----i-----------------~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtr  348 (626)
T KOG2106|consen  292 SLCML-RDG-TLLSGGKDRK----I-----------------ILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTR  348 (626)
T ss_pred             EEEEe-cCc-cEeecCccce----E-----------------EeccccccccccccCchhcCCeeEEecCCCcEEEeecc
Confidence            99997 444 4556555554    7                 66763110        0000       0        00


Q ss_pred             ccccc-------ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC
Q psy10942        211 SQQKH-------NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG  283 (537)
Q Consensus       211 ~~~l~-------~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (537)
                      ..+|.       .....+|  ......+   +.+|+.+++++++.|+.++  +|+  ............+.....+|..+
T Consensus       349 N~iL~Gt~~~~f~~~v~gh--~delwgl---a~hps~~q~~T~gqdk~v~--lW~--~~k~~wt~~~~d~~~~~~fhpsg  419 (626)
T KOG2106|consen  349 NFILQGTLENGFTLTVQGH--GDELWGL---ATHPSKNQLLTCGQDKHVR--LWN--DHKLEWTKIIEDPAECADFHPSG  419 (626)
T ss_pred             ceEEEeeecCCceEEEEec--ccceeeE---EcCCChhheeeccCcceEE--Ecc--CCceeEEEEecCceeEeeccCcc
Confidence            00000       1112378  7888899   9999999999999999999  999  33344555555556666667664


Q ss_pred             cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC
Q psy10942        284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK  363 (537)
Q Consensus       284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  363 (537)
                         .++.|...|.-.+.|.++...+.     .-.. ..++++++|+|+|.+||.|+.|+.|++|.+...+........+.
T Consensus       420 ---~va~Gt~~G~w~V~d~e~~~lv~-----~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~  490 (626)
T KOG2106|consen  420 ---VVAVGTATGRWFVLDTETQDLVT-----IHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCS  490 (626)
T ss_pred             ---eEEEeeccceEEEEecccceeEE-----EEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeec
Confidence               79999999999999999855321     1223 78899999999999999999999999999985544443332221


Q ss_pred             CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        364 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       364 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                      .                               .                 +|+.+.||+|++++.+-+.|-.|..|....
T Consensus       491 g-------------------------------s-----------------~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~  522 (626)
T KOG2106|consen  491 G-------------------------------S-----------------PITHLDWSSDSQFLVSNSGDYEILYWKPSE  522 (626)
T ss_pred             C-------------------------------c-----------------eeEEeeecCCCceEEeccCceEEEEEcccc
Confidence            1                               0                 899999999999999999999999994332


Q ss_pred             ceeeeE--------------e----ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC---eeEEEecCCccceecc
Q psy10942        444 YVCLKS--------------L----EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS---TCVSTFDKHALKIRNS  502 (537)
Q Consensus       444 ~~~~~~--------------~----~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~---~~~~~~~~~~~~i~~~  502 (537)
                      -+.+..              +    ..|...|+.++-+...+++|+|.+.|.|++|...--   .....+.+|...+   
T Consensus       523 ~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~v---  599 (626)
T KOG2106|consen  523 CKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHV---  599 (626)
T ss_pred             CcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeecccccee---
Confidence            111111              1    124455777777888899999999999999987532   3446778999999   


Q ss_pred             CCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        503 DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       503 ~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                              .++   +|.-+...|++.+.|.+|..|
T Consensus       600 --------t~V---~Fl~~d~~li~tg~D~Si~qW  623 (626)
T KOG2106|consen  600 --------TNV---AFLCKDSHLISTGKDTSIMQW  623 (626)
T ss_pred             --------EEE---EEeeCCceEEecCCCceEEEE
Confidence                    899   999999999988899999988

>KOG0316|consensus

Probab=100.00  E-value=7.1e-33  Score=220.49  Aligned_cols=257  Identities=22%  Similarity=0.271  Sum_probs=223.1

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--------CcceEEEEEe
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--------GTVELLASGS  292 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~l~~~~  292 (537)
                      .+  .++|..+   .|+-+|+|.++++.|++++  +|+...+    .+     +.++.+|..        ..-..+++|+
T Consensus        15 ~~--qgaV~av---ryN~dGnY~ltcGsdrtvr--LWNp~rg----~l-----iktYsghG~EVlD~~~s~Dnskf~s~G   78 (307)
T KOG0316|consen   15 CA--QGAVRAV---RYNVDGNYCLTCGSDRTVR--LWNPLRG----AL-----IKTYSGHGHEVLDAALSSDNSKFASCG   78 (307)
T ss_pred             cc--ccceEEE---EEccCCCEEEEcCCCceEE--eeccccc----ce-----eeeecCCCceeeeccccccccccccCC
Confidence            88  9999999   9999999999999999999  9999874    33     555565544        1116899999


Q ss_pred             CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-CceeeEEEEecCC-------
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG-GLKLLNVLRGHKK-------  364 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~-------  364 (537)
                      .|..+.+||+.+++.     .+.+.+|.+.|+.++|+.+...+++|+.|..+++||.++ ..++++.+....+       
T Consensus        79 gDk~v~vwDV~TGkv-----~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v  153 (307)
T KOG0316|consen   79 GDKAVQVWDVNTGKV-----DRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV  153 (307)
T ss_pred             CCceEEEEEcccCee-----eeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe
Confidence            999999999999987     556789999999999999999999999999999999984 3456666655444       


Q ss_pred             -CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        365 -GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       365 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                       +..+++|+.||+++.||++.|+....+-++                   +|++++|++|++..+.++.|+++++.|-.+
T Consensus       154 ~~heIvaGS~DGtvRtydiR~G~l~sDy~g~-------------------pit~vs~s~d~nc~La~~l~stlrLlDk~t  214 (307)
T KOG0316|consen  154 AEHEIVAGSVDGTVRTYDIRKGTLSSDYFGH-------------------PITSVSFSKDGNCSLASSLDSTLRLLDKET  214 (307)
T ss_pred             cccEEEeeccCCcEEEEEeecceeehhhcCC-------------------cceeEEecCCCCEEEEeeccceeeecccch
Confidence             567899999999999999999987777666                   899999999999999999999999999999


Q ss_pred             ceeeeEeecCCcce--EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccc-eeccCCCCCCccccccceeeec
Q psy10942        444 YVCLKSLEGHDASV--LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK-IRNSDSENDHKGFGLPRQLCSR  520 (537)
Q Consensus       444 ~~~~~~~~~~~~~v--~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~s~  520 (537)
                      |+.+..+++|.+.-  ..++++....++++|++||.|++||+.....+..+..+... +           .++   +++|
T Consensus       215 GklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v-----------~dl---~~hp  280 (307)
T KOG0316|consen  215 GKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIV-----------TDL---SCHP  280 (307)
T ss_pred             hHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeE-----------Eee---eccc
Confidence            99999999998753  45677777889999999999999999999999999988877 6           788   9999


Q ss_pred             CCCEEEEEeCC
Q psy10942        521 NSDCEYRGGWS  531 (537)
Q Consensus       521 ~~~~l~s~~~d  531 (537)
                      .-..++++..-
T Consensus       281 ~~~~f~~A~~~  291 (307)
T KOG0316|consen  281 TMDDFITATGH  291 (307)
T ss_pred             CccceeEecCC
Confidence            98888887543

>KOG1408|consensus

Probab=100.00  E-value=4.3e-32  Score=248.74  Aligned_cols=419  Identities=16%  Similarity=0.220  Sum_probs=299.5

Q ss_pred             CceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee-eecccc--cc----c-----e--e--------eeEeecC
Q psy10942          1 VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYPAYE--SL----E-----T--C--------AVFHLSD   58 (537)
Q Consensus         1 ~~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~~~~--~~----~-----~--~--------~~~~~~~   58 (537)
                      |...|++++|+  +|+.|++|++. ..|++|.++-++.++ .+|...  .+    .     +  |        .|.....
T Consensus       164 iss~Vsav~fs--EdgSYfvT~gn-rHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~q  240 (1080)
T KOG1408|consen  164 ISSVVSAVAFS--EDGSYFVTSGN-RHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQ  240 (1080)
T ss_pred             cceeEEEEEEc--cCCceeeeeee-eeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecc
Confidence            35679999999  99999999985 569999998776433 222100  00    0     0  0        0000000


Q ss_pred             c---------------------cccccCCcEEEEEeCccceEEeeeccceehhhhcCCC---------------------
Q psy10942         59 E---------------------TESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS---------------------   96 (537)
Q Consensus        59 ~---------------------~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~---------------------   96 (537)
                      +                     .....-+.+++++|..+|.|++++.++...+.++...                     
T Consensus       241 GhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~  320 (1080)
T KOG1408|consen  241 GHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESS  320 (1080)
T ss_pred             cceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccC
Confidence            0                     0001125579999999999999999887666555432                     


Q ss_pred             ----cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC----------CC
Q psy10942         97 ----SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE----------ED  162 (537)
Q Consensus        97 ----~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~  162 (537)
                          -...++.|+|....|.+...|..++|||+...       .+.++ ...+-.|...|..+.--|-          ..
T Consensus       321 ~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~-------~kvgk-~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~  392 (1080)
T KOG1408|consen  321 PAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDV-------NKVGK-CSSMLYHSACIWDVENLPCNVHSPTAACLPR  392 (1080)
T ss_pred             cccCCceeEEEecCCCceEEEEEcCceEEEEecccc-------ccccc-eeeeeeccceeeeeccccccccCcccccCCc
Confidence                13567889999999999999999999999873       22233 3344557777766654430          12


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH------------hh----hccccccc-cccc--------
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE------------AK----FKQSSSQQ-KHNT--------  217 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~------------~~----~~~~~~~~-l~~~--------  217 (537)
                      ..+++++.++.    |                 ++|++...            ..    .-.....+ +.-.        
T Consensus       393 ~cF~TCSsD~T----I-----------------RlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka  451 (1080)
T KOG1408|consen  393 GCFTTCSSDGT----I-----------------RLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKA  451 (1080)
T ss_pred             cceeEecCCCc----E-----------------EEeecccccccceeecccchhhhhcCccccCchhhhhhccCCccccc
Confidence            34567777776    8                 88877210            00    00000000 0000        


Q ss_pred             --ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc--------
Q psy10942        218 --ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV--------  285 (537)
Q Consensus       218 --~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v--------  285 (537)
                        ...+.  ...+.++   +.+|+|++||+|..-|.++  ++++.....         ...+..|..  .++        
T Consensus       452 ~~s~~d~--r~G~R~~---~vSp~gqhLAsGDr~Gnlr--Vy~Lq~l~~---------~~~~eAHesEilcLeyS~p~~~  515 (1080)
T KOG1408|consen  452 LVSTCDS--RFGFRAL---AVSPDGQHLASGDRGGNLR--VYDLQELEY---------TCFMEAHESEILCLEYSFPVLT  515 (1080)
T ss_pred             chhhcCc--ccceEEE---EECCCcceecccCccCceE--EEEehhhhh---------hhheecccceeEEEeecCchhh
Confidence              00123  4578999   9999999999999999999  999987321         223334433  111        


Q ss_pred             -eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEccC-----------
Q psy10942        286 -ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND--KLLASGSLDKTVKVWSTTG-----------  351 (537)
Q Consensus       286 -~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~i~d~~~-----------  351 (537)
                       .+|++++.|+.|.+||....-.+    ...+.+|...|+++.|.-.|  ..+++++.|..|.+--.+.           
T Consensus       516 ~kLLASasrdRlIHV~Dv~rny~l----~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t  591 (1080)
T KOG1408|consen  516 NKLLASASRDRLIHVYDVKRNYDL----VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHT  591 (1080)
T ss_pred             hHhhhhccCCceEEEEecccccch----hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccc
Confidence             78999999999999999876543    67789999999999998877  7889999998776533221           


Q ss_pred             ---CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE
Q psy10942        352 ---GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI  428 (537)
Q Consensus       352 ---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  428 (537)
                         ....+..+...+..+++++++.|..|++||+.+++..+.|++....        +      |..-.+...|.|-|+|
T Consensus       592 ~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~--------e------G~lIKv~lDPSgiY~a  657 (1080)
T KOG1408|consen  592 QTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDH--------E------GDLIKVILDPSGIYLA  657 (1080)
T ss_pred             cccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccC--------C------CceEEEEECCCccEEE
Confidence               1223445566677899999999999999999999999999764431        1      1456678899999999


Q ss_pred             EEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        429 SSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       429 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      +...|.++.++|..+++++....+|...|+.+.|.+|-++|++.+.||+|.||.+..
T Consensus       658 tScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  658 TSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             EeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            999999999999999999999999999999999999999999999999999999854

>KOG0284|consensus

Probab=100.00  E-value=4.7e-34  Score=244.90  Aligned_cols=276  Identities=17%  Similarity=0.183  Sum_probs=230.7

Q ss_pred             CceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee-eeccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          1 VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         1 ~~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      ||+.|..+.+.  |+|+.|++|+..|.+.+|+..+..... ...+..++.++  .+++        ++.++++|..+|.|
T Consensus        95 vkc~V~~v~Wt--PeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m--~ws~--------~g~wmiSgD~gG~i  162 (464)
T KOG0284|consen   95 VKCPVNVVRWT--PEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTM--KWSH--------NGTWMISGDKGGMI  162 (464)
T ss_pred             cccceeeEEEc--CCCceeEeecccccEEEecCceeeHHHHhhhhcccceeE--EEcc--------CCCEEEEcCCCceE
Confidence            57889999999  999999999999999999975533222 22366777888  6787        77999999999999


Q ss_pred             EeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         80 HYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      ++|+..-........++ +.|++++|||+...+++++.||+|+|||...           ....+.+.||.-.|.++.|+
T Consensus       163 KyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~-----------~kee~vL~GHgwdVksvdWH  231 (464)
T KOG0284|consen  163 KYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM-----------PKEERVLRGHGWDVKSVDWH  231 (464)
T ss_pred             EecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccC-----------CchhheeccCCCCcceeccC
Confidence            99998765555555555 7999999999999999999999999999988           56667789999999999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCc
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                       |..+.+++++.+..    |                 ++||.       +++.|+  +.     +|  ...|..+   .|
T Consensus       232 -P~kgLiasgskDnl----V-----------------KlWDp-------rSg~cl~tlh-----~H--KntVl~~---~f  272 (464)
T KOG0284|consen  232 -PTKGLIASGSKDNL----V-----------------KLWDP-------RSGSCLATLH-----GH--KNTVLAV---KF  272 (464)
T ss_pred             -CccceeEEccCCce----e-----------------EeecC-------CCcchhhhhh-----hc--cceEEEE---EE
Confidence             67778888877776    9                 99999       999999  88     99  9999999   99


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-------eEEEEEeCCCeEEEEECCCCce
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-------ELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      +|++++|++++.|..++  ++|++.-.    -     +..+.+|..  .++       .+|.+|+.||.|..|.+...+.
T Consensus       273 ~~n~N~Llt~skD~~~k--v~DiR~mk----E-----l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p  341 (464)
T KOG0284|consen  273 NPNGNWLLTGSKDQSCK--VFDIRTMK----E-----LFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP  341 (464)
T ss_pred             cCCCCeeEEccCCceEE--EEehhHhH----H-----HHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc
Confidence            99999999999999999  99998521    1     444444544  222       7899999999999999985544


Q ss_pred             eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL  353 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  353 (537)
                      +    ...-.+|...|.+++|+|-|..|++|+.|.++++|.-....
T Consensus       342 ~----~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~  383 (464)
T KOG0284|consen  342 L----GEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPG  383 (464)
T ss_pred             c----cCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCC
Confidence            3    34456899999999999999999999999999999866433

>KOG0281|consensus

Probab=100.00  E-value=8.1e-35  Score=244.50  Aligned_cols=266  Identities=25%  Similarity=0.399  Sum_probs=223.4

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..|.|+.+  |...+++|..|++|+|||..+           ..+.+.+.||++.|.|+.|.   ...+++++.+..   
T Consensus       198 kgVYClQY--DD~kiVSGlrDnTikiWD~n~-----------~~c~~~L~GHtGSVLCLqyd---~rviisGSSDsT---  258 (499)
T KOG0281|consen  198 KGVYCLQY--DDEKIVSGLRDNTIKIWDKNS-----------LECLKILTGHTGSVLCLQYD---ERVIVSGSSDST---  258 (499)
T ss_pred             CceEEEEe--cchhhhcccccCceEEecccc-----------HHHHHhhhcCCCcEEeeecc---ceEEEecCCCce---
Confidence            57888887  445689999999999999999           89999999999999999997   567777777777   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||+       ++++++  +-     +|  ...|..+   .|+.  .++++++.|.++. 
T Consensus       259 -v-----------------rvWDv-------~tge~l~tli-----hH--ceaVLhl---rf~n--g~mvtcSkDrsia-  300 (499)
T KOG0281|consen  259 -V-----------------RVWDV-------NTGEPLNTLI-----HH--CEAVLHL---RFSN--GYMVTCSKDRSIA-  300 (499)
T ss_pred             -E-----------------EEEec-------cCCchhhHHh-----hh--cceeEEE---EEeC--CEEEEecCCceeE-
Confidence             9                 99999       999988  77     89  9999999   7753  4788888888888 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|++..... ..                                            +...+.+|...|+.+.|+  .++
T Consensus       301 -VWdm~sps~-it--------------------------------------------~rrVLvGHrAaVNvVdfd--~ky  332 (499)
T KOG0281|consen  301 -VWDMASPTD-IT--------------------------------------------LRRVLVGHRAAVNVVDFD--DKY  332 (499)
T ss_pred             -EEeccCchH-HH--------------------------------------------HHHHHhhhhhheeeeccc--cce
Confidence             887776320 00                                            145678999999999995  569


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++++.|.+|++|++. +.+.++++.+|..                                                 +
T Consensus       333 IVsASgDRTikvW~~s-t~efvRtl~gHkR-------------------------------------------------G  362 (499)
T KOG0281|consen  333 IVSASGDRTIKVWSTS-TCEFVRTLNGHKR-------------------------------------------------G  362 (499)
T ss_pred             EEEecCCceEEEEecc-ceeeehhhhcccc-------------------------------------------------c
Confidence            9999999999999998 7777777777765                                                 5


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe-------
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST-------  487 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~-------  487 (537)
                      |.|+.+  .++++++|+.|.+|++||+..|.+++.++||+.-|.++.|  |.+.+++|+.||+|+|||+.++.       
T Consensus       363 IAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~  438 (499)
T KOG0281|consen  363 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAS  438 (499)
T ss_pred             ceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeeccccceEEEEecccccCCccccc
Confidence            555544  4789999999999999999999999999999999999999  56689999999999999998764       


Q ss_pred             --eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        488 --CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       488 --~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                        ++..+..|.+.|           ..+   .|  |...|++++.|.+|.||
T Consensus       439 ~~Cl~~lv~hsgRV-----------FrL---QF--D~fqIvsssHddtILiW  474 (499)
T KOG0281|consen  439 TLCLRTLVEHSGRV-----------FRL---QF--DEFQIISSSHDDTILIW  474 (499)
T ss_pred             chHHHhhhhcccee-----------EEE---ee--cceEEEeccCCCeEEEE
Confidence              334555677788           888   88  88899999999999998

>KOG0285|consensus

Probab=100.00  E-value=1.3e-32  Score=232.09  Aligned_cols=272  Identities=15%  Similarity=0.184  Sum_probs=231.1

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      |.|+++-  |..++|+||+.|++++|||+.+|++..+++ +.+.+..+  .+++        -.+|++++++|+.|+.||
T Consensus       154 Vr~vavd--P~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~v--avS~--------rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  154 VRSVAVD--PGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGV--AVSK--------RHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             EEEEeeC--CCceeEEecCCCceeEEEEcccCeEEEeecchhheeeee--eecc--------cCceEEEecCCCeeEEEe
Confidence            7899999  778999999999999999999999999998 67777777  4466        558999999999999999


Q ss_pred             ccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942         84 TSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED  162 (537)
Q Consensus        84 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (537)
                      ++..+.++...+| ..|.+++..|.-..|++|+.|.++++||+.+           ...+..+.||...|..+.+. +-+
T Consensus       222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt-----------r~~V~~l~GH~~~V~~V~~~-~~d  289 (460)
T KOG0285|consen  222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT-----------RASVHVLSGHTNPVASVMCQ-PTD  289 (460)
T ss_pred             chhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecc-----------cceEEEecCCCCcceeEEee-cCC
Confidence            9999999999887 7999999999999999999999999999999           78899999999999999998 555


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE  240 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~  240 (537)
                      ..+++++.+..    |                 ++||+       ..++..  +.     .|  ...|.++   +.+|..
T Consensus       290 pqvit~S~D~t----v-----------------rlWDl-------~agkt~~tlt-----~h--kksvral---~lhP~e  331 (460)
T KOG0285|consen  290 PQVITGSHDST----V-----------------RLWDL-------RAGKTMITLT-----HH--KKSVRAL---CLHPKE  331 (460)
T ss_pred             CceEEecCCce----E-----------------EEeee-------ccCceeEeee-----cc--cceeeEE---ecCCch
Confidence            66778888877    9                 99999       777766  77     89  9999999   999999


Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-----eEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-----ELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-----~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                      ..+|+++.| .++  -|++..+..         +..+.+|..  +++     ..+++|+.+|.+..||.+++........
T Consensus       332 ~~fASas~d-nik--~w~~p~g~f---------~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t  399 (460)
T KOG0285|consen  332 NLFASASPD-NIK--QWKLPEGEF---------LQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRGQT  399 (460)
T ss_pred             hhhhccCCc-cce--eccCCccch---------hhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCcccccccc
Confidence            999999987 477  899988532         333555555  222     7899999999999999998865433211


Q ss_pred             ccc---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        314 GHK---KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       314 ~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      ...   ...+..|.+.+|...|..|++|..|.+|++|.-.
T Consensus       400 ~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  400 IVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             cccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            111   1235678999999999999999999999999765

>KOG0313|consensus

Probab=100.00  E-value=1.9e-32  Score=232.97  Aligned_cols=313  Identities=20%  Similarity=0.233  Sum_probs=238.3

Q ss_pred             ceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc--
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS--  163 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--  163 (537)
                      ..+.+..+.+.++|.++...  +++|.+++.||.+++||..+            +...++.||.+++.+++|.-++..  
T Consensus        95 aP~pl~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G------------k~~~~~~Ght~~ik~v~~v~~n~~~~  160 (423)
T KOG0313|consen   95 APKPLQCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG------------KSIKTIVGHTGPIKSVAWVIKNSSSC  160 (423)
T ss_pred             CCCccccccchhhhhhhccc--CceEEEeecCCeeEEEecCC------------ceEEEEecCCcceeeeEEEecCCccc
Confidence            34556677777899999887  78999999999999999886            788899999999998888644333  


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccccc-ccccccCCCcCeEEEEeccCcccCCCe
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKH-NTERLGRDELKTVTLLERGKTVKEEDL  242 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~-~~~~~~h~~~~~v~~~~~~~~s~~~~~  242 (537)
                      .+++++.+..    +                 ++|..       +.++..+. .....||  ...|.++   ...++|..
T Consensus       161 ~fvsas~Dqt----l-----------------~Lw~~-------~~~~~~~~~~~~~~GH--k~~V~sV---sv~~sgtr  207 (423)
T KOG0313|consen  161 LFVSASMDQT----L-----------------RLWKW-------NVGENKVKALKVCRGH--KRSVDSV---SVDSSGTR  207 (423)
T ss_pred             eEEEecCCce----E-----------------EEEEe-------cCchhhhhHHhHhccc--ccceeEE---EecCCCCe
Confidence            4677777776    8                 88877       54444411 1122399  9999999   99999999


Q ss_pred             eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCC
Q psy10942        243 FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKD  322 (537)
Q Consensus       243 l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~  322 (537)
                      +++|+.|.++.  +|+.......          .+.....          ..+.-...+-..+   .+.....+.+|..+
T Consensus       208 ~~SgS~D~~lk--iWs~~~~~~~----------~~E~~s~----------~rrk~~~~~~~~~---~r~P~vtl~GHt~~  262 (423)
T KOG0313|consen  208 FCSGSWDTMLK--IWSVETDEED----------ELESSSN----------RRRKKQKREKEGG---TRTPLVTLEGHTEP  262 (423)
T ss_pred             EEeecccceee--ecccCCCccc----------cccccch----------hhhhhhhhhhccc---ccCceEEecccccc
Confidence            99999999999  9994332110          0000000          0000000000111   11114567899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      |.++.|++ ...+++++.|.+|+.||+. .+.....+....                                       
T Consensus       263 Vs~V~w~d-~~v~yS~SwDHTIk~WDle-tg~~~~~~~~~k---------------------------------------  301 (423)
T KOG0313|consen  263 VSSVVWSD-ATVIYSVSWDHTIKVWDLE-TGGLKSTLTTNK---------------------------------------  301 (423)
T ss_pred             eeeEEEcC-CCceEeecccceEEEEEee-cccceeeeecCc---------------------------------------
Confidence            99999997 6789999999999999998 444444333221                                       


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---eeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---VCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLL  478 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v  478 (537)
                                 .+.++.++|..++|++|+.|..|++||.+++   -..+++.+|.+.|.++.|+|.. .+|++++.|+++
T Consensus       302 -----------sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~  370 (423)
T KOG0313|consen  302 -----------SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTV  370 (423)
T ss_pred             -----------ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeE
Confidence                       7888999999999999999999999998874   3567889999999999999954 568899999999


Q ss_pred             EEEECCCCe-eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        479 KLWSIKTST-CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       479 ~vwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++||+++.+ ++..+.+|.+.|           .++   .|+ ++.+|++||.|.+|+|+
T Consensus       371 klWDvRS~k~plydI~~h~DKv-----------l~v---dW~-~~~~IvSGGaD~~l~i~  415 (423)
T KOG0313|consen  371 KLWDVRSTKAPLYDIAGHNDKV-----------LSV---DWN-EGGLIVSGGADNKLRIF  415 (423)
T ss_pred             EEEEeccCCCcceeeccCCceE-----------EEE---ecc-CCceEEeccCcceEEEe
Confidence            999999887 999999999999           888   885 45689999999999985

>KOG0278|consensus

Probab=100.00  E-value=1.9e-32  Score=219.98  Aligned_cols=277  Identities=16%  Similarity=0.182  Sum_probs=236.5

Q ss_pred             CCcceEEEEEe---ccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         95 LSSPLVRIVRS---SVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        95 ~~~~v~~~~~s---~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      +..+|..++||   |+|-+|++++.|+.=.+-+-++           +.-+.++.||.+.|.+.+.+ .+....++++.+
T Consensus        13 htrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~t-----------gdwigtfeghkgavw~~~l~-~na~~aasaaad   80 (334)
T KOG0278|consen   13 HTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDT-----------GDWIGTFEGHKGAVWSATLN-KNATRAASAAAD   80 (334)
T ss_pred             CCcceeEEeccCCCCCceEEEEeccCCCchhccCCC-----------CCcEEeeeccCcceeeeecC-chhhhhhhhccc
Confidence            34689999997   6898999999999888877777           78899999999999999887 666666666766


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP  250 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~  250 (537)
                      -.    -                 ++||.       -++..+ --     .|  ...|.++   +|+.|.++|++|+.+.
T Consensus        81 ft----a-----------------kvw~a-------~tgdelhsf-----~h--khivk~~---af~~ds~~lltgg~ek  122 (334)
T KOG0278|consen   81 FT----A-----------------KVWDA-------VTGDELHSF-----EH--KHIVKAV---AFSQDSNYLLTGGQEK  122 (334)
T ss_pred             ch----h-----------------hhhhh-------hhhhhhhhh-----hh--hheeeeE---EecccchhhhccchHH
Confidence            66    7                 99999       777777 33     57  8889999   9999999999999999


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .+|  +++++....+                                               ...+.+|.+.|..+.|..
T Consensus       123 llr--vfdln~p~Ap-----------------------------------------------p~E~~ghtg~Ir~v~wc~  153 (334)
T KOG0278|consen  123 LLR--VFDLNRPKAP-----------------------------------------------PKEISGHTGGIRTVLWCH  153 (334)
T ss_pred             Hhh--hhhccCCCCC-----------------------------------------------chhhcCCCCcceeEEEec
Confidence            999  8888774211                                               344678999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce
Q psy10942        331 NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI  410 (537)
Q Consensus       331 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  410 (537)
                      ..+.+++++.|++|++||.+ .+..++.+....                                               
T Consensus       154 eD~~iLSSadd~tVRLWD~r-Tgt~v~sL~~~s-----------------------------------------------  185 (334)
T KOG0278|consen  154 EDKCILSSADDKTVRLWDHR-TGTEVQSLEFNS-----------------------------------------------  185 (334)
T ss_pred             cCceEEeeccCCceEEEEec-cCcEEEEEecCC-----------------------------------------------
Confidence            88999998999999999988 555555554332                                               


Q ss_pred             EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                         +++++.++++|++|.++. .+.|.+||..+..++..++. ...|.+...+|+...+++|+.|..++.||..+|+.+.
T Consensus       186 ---~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~  260 (334)
T KOG0278|consen  186 ---PVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIG  260 (334)
T ss_pred             ---CCcceeeccCCCEEEEec-CceeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCCceee
Confidence               788899999999887765 47899999999998888874 4568999999999999999999999999999999998


Q ss_pred             Ee-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        491 TF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       491 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+ ++|.++|           .++   .|+|||..-++|+.||+||||
T Consensus       261 ~~nkgh~gpV-----------hcV---rFSPdGE~yAsGSEDGTirlW  294 (334)
T KOG0278|consen  261 SYNKGHFGPV-----------HCV---RFSPDGELYASGSEDGTIRLW  294 (334)
T ss_pred             ecccCCCCce-----------EEE---EECCCCceeeccCCCceEEEE
Confidence            86 8999999           999   999999999999999999999

>KOG0276|consensus

Probab=100.00  E-value=1.3e-32  Score=248.54  Aligned_cols=279  Identities=21%  Similarity=0.265  Sum_probs=247.8

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      ..+.|.++.|+|...++.++-.+|.|.|||.++           +..++.+.-..-+|.+..|. ...+.+++++.+.. 
T Consensus        12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyet-----------qtmVksfeV~~~PvRa~kfi-aRknWiv~GsDD~~-   78 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYET-----------QTMVKSFEVSEVPVRAAKFI-ARKNWIVTGSDDMQ-   78 (794)
T ss_pred             cCCceeeeecCCCCceEEEeeecCeeEEEeccc-----------ceeeeeeeecccchhhheee-eccceEEEecCCce-
Confidence            457999999999999999999999999999999           89999999989999999999 77888989988888 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         |                 ++++.       ++.+.+  ++     .|  .+.|.++   +.+|...++++++.|-+|
T Consensus        79 ---I-----------------rVfny-------nt~ekV~~Fe-----AH--~DyIR~i---avHPt~P~vLtsSDDm~i  121 (794)
T KOG0276|consen   79 ---I-----------------RVFNY-------NTGEKVKTFE-----AH--SDYIRSI---AVHPTLPYVLTSSDDMTI  121 (794)
T ss_pred             ---E-----------------EEEec-------ccceeeEEee-----cc--ccceeee---eecCCCCeEEecCCccEE
Confidence               9                 99999       888887  88     99  9999999   999999999999999888


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-C
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-N  331 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~  331 (537)
                      +  +|+.+..   ..|                                            .+.+.+|...|.+++|.| |
T Consensus       122 K--lW~we~~---wa~--------------------------------------------~qtfeGH~HyVMqv~fnPkD  152 (794)
T KOG0276|consen  122 K--LWDWENE---WAC--------------------------------------------EQTFEGHEHYVMQVAFNPKD  152 (794)
T ss_pred             E--EeeccCc---eee--------------------------------------------eeEEcCcceEEEEEEecCCC
Confidence            8  8888762   111                                            456789999999999999 6


Q ss_pred             CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                      .+.+++++-|++|++|.+. ...+..++.+|..                                               
T Consensus       153 ~ntFaS~sLDrTVKVWslg-s~~~nfTl~gHek-----------------------------------------------  184 (794)
T KOG0276|consen  153 PNTFASASLDRTVKVWSLG-SPHPNFTLEGHEK-----------------------------------------------  184 (794)
T ss_pred             ccceeeeeccccEEEEEcC-CCCCceeeecccc-----------------------------------------------
Confidence            6899999999999999998 6666666666665                                               


Q ss_pred             EeeeeEEEEcCCC--CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        412 TGGVWFVNFSPLD--RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       412 ~~~i~~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                        +|+++.|-+-|  .+|++|+.|..|++||..+..+++++.||...|..+.|+|.-.++++|++||++|||+..+.++.
T Consensus       185 --GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE  262 (794)
T KOG0276|consen  185 --GVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLE  262 (794)
T ss_pred             --CcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehh
Confidence              78888887644  69999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ..+.-.-..+           +++   +-.+.++.++.|.+.|.|.|
T Consensus       263 ~tLn~gleRv-----------W~I---~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  263 KTLNYGLERV-----------WCI---AAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             hhhhcCCceE-----------EEE---eecCCCCeEEEeccCCcEEE
Confidence            8887777788           888   88888889999988888754

>KOG0282|consensus

Probab=100.00  E-value=2.6e-33  Score=245.68  Aligned_cols=291  Identities=17%  Similarity=0.205  Sum_probs=240.2

Q ss_pred             ccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc--c
Q psy10942        138 ILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ--K  214 (537)
Q Consensus       138 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~--l  214 (537)
                      +...+..+.||+..|.++.|.|....+|++++.+..    |                 +||++       -. +.++  +
T Consensus       203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~----v-----------------klW~v-------y~~~~~lrtf  254 (503)
T KOG0282|consen  203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGL----V-----------------KLWNV-------YDDRRCLRTF  254 (503)
T ss_pred             cHhheeeccCCccccchhhhccceeeEEEecCCCce----E-----------------EEEEE-------ecCcceehhh
Confidence            456778899999999999999667777777777766    9                 99998       44 5555  6


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD  294 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d  294 (537)
                      .     ||  ..+|..+   +|+++|..+++++.|+.++  +||++++.................|..+ -+.+++|+.|
T Consensus       255 ~-----gH--~k~Vrd~---~~s~~g~~fLS~sfD~~lK--lwDtETG~~~~~f~~~~~~~cvkf~pd~-~n~fl~G~sd  321 (503)
T KOG0282|consen  255 K-----GH--RKPVRDA---SFNNCGTSFLSASFDRFLK--LWDTETGQVLSRFHLDKVPTCVKFHPDN-QNIFLVGGSD  321 (503)
T ss_pred             h-----cc--hhhhhhh---hccccCCeeeeeecceeee--eeccccceEEEEEecCCCceeeecCCCC-CcEEEEecCC
Confidence            6     99  9999999   9999999999999999999  9999997654444444445555555554 2789999999


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                      +.|+.||+++++.     ...+..|-+.|..+.|-++|+++++.+.|++++||+.+ ..-++..+..+.           
T Consensus       322 ~ki~~wDiRs~kv-----vqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~-~~v~ik~i~~~~-----------  384 (503)
T KOG0282|consen  322 KKIRQWDIRSGKV-----VQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENR-IPVPIKNIADPE-----------  384 (503)
T ss_pred             CcEEEEeccchHH-----HHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcC-CCccchhhcchh-----------
Confidence            9999999999985     66778899999999999999999999999999999988 333332221111           


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---ceeeeEee
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---YVCLKSLE  451 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~  451 (537)
                                        .|                   ...++..+|++.+++.-+.|+.|.++.+..   ......++
T Consensus       385 ------------------~h-------------------smP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~fe  427 (503)
T KOG0282|consen  385 ------------------MH-------------------TMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFE  427 (503)
T ss_pred             ------------------hc-------------------cCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhc
Confidence                              01                   567788999999999999999999998654   23345677


Q ss_pred             cCCc--ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCC-CEEEEE
Q psy10942        452 GHDA--SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS-DCEYRG  528 (537)
Q Consensus       452 ~~~~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~-~~l~s~  528 (537)
                      +|..  .-..+.|||||.+|++|+.||.+.+||.++-+++..++.|+.++           ..+   .|+|.. ..+|++
T Consensus       428 Gh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~c-----------i~v---~wHP~e~Skvat~  493 (503)
T KOG0282|consen  428 GHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPC-----------IGV---DWHPVEPSKVATC  493 (503)
T ss_pred             ceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcce-----------EEE---EecCCCcceeEec
Confidence            7753  45678999999999999999999999999999999999999999           888   999975 478999


Q ss_pred             eCCCCEEeC
Q psy10942        529 GWSPQVVVY  537 (537)
Q Consensus       529 ~~dg~i~vW  537 (537)
                      +.||.|++|
T Consensus       494 ~w~G~Ikiw  502 (503)
T KOG0282|consen  494 GWDGLIKIW  502 (503)
T ss_pred             ccCceeEec
Confidence            999999999

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=8.5e-31  Score=270.64  Aligned_cols=273  Identities=19%  Similarity=0.200  Sum_probs=211.8

Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc--------cccccceeeeeeCCcceEEEE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI--------FVPEAEHGAFYTGGTVELLAS  290 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~l~~  290 (537)
                      +..|  ...|.++   +|+|+|+++++|+.|+.|+  +|+...........        ....+..+..+.. .-..+++
T Consensus       479 ~~~~--~~~V~~i---~fs~dg~~latgg~D~~I~--iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~~las  550 (793)
T PLN00181        479 LLNS--SNLVCAI---GFDRDGEFFATAGVNKKIK--IFECESIIKDGRDIHYPVVELASRSKLSGICWNSY-IKSQVAS  550 (793)
T ss_pred             ccCC--CCcEEEE---EECCCCCEEEEEeCCCEEE--EEECCcccccccccccceEEecccCceeeEEeccC-CCCEEEE
Confidence            3468  9999999   9999999999999999999  99976421000000        0000111111111 0157999


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEe--------
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRG--------  361 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------  361 (537)
                      ++.||+|++||+.+++.     ...+.+|...|.+++|+| ++.+|++|+.|+.|++||++ ....+..+..        
T Consensus       551 ~~~Dg~v~lWd~~~~~~-----~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~-~~~~~~~~~~~~~v~~v~  624 (793)
T PLN00181        551 SNFEGVVQVWDVARSQL-----VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN-QGVSIGTIKTKANICCVQ  624 (793)
T ss_pred             EeCCCeEEEEECCCCeE-----EEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC-CCcEEEEEecCCCeEEEE
Confidence            99999999999998765     344578999999999997 78999999999999999998 4444443332        


Q ss_pred             --cCCCCEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        362 --HKKGTQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL  438 (537)
Q Consensus       362 --~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i  438 (537)
                        .+++..+++++.||.|++||+++.+ .+..+.+|..                 .|.++.|. ++.+|++++.|+.|++
T Consensus       625 ~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~-----------------~V~~v~f~-~~~~lvs~s~D~~iki  686 (793)
T PLN00181        625 FPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSK-----------------TVSYVRFV-DSSTLVSSSTDNTLKL  686 (793)
T ss_pred             EeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCC-----------------CEEEEEEe-CCCEEEEEECCCEEEE
Confidence              2458899999999999999998765 4566667765                 56677775 6778999999999999


Q ss_pred             EECCC------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec-------------CCccce
Q psy10942        439 WCLTD------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD-------------KHALKI  499 (537)
Q Consensus       439 ~d~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-------------~~~~~i  499 (537)
                      ||+..      .+++..+.+|...+..++|+|++++|++|+.|+.|++|+......+..+.             .|...|
T Consensus       687 Wd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V  766 (793)
T PLN00181        687 WDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFI  766 (793)
T ss_pred             EeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEE
Confidence            99974      35788899999999999999999999999999999999987665443322             122334


Q ss_pred             eccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        500 RNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                 .++   +|+|++..|++|+.||.|+||
T Consensus       767 -----------~~v---~ws~~~~~lva~~~dG~I~i~  790 (793)
T PLN00181        767 -----------SSV---CWRGQSSTLVAANSTGNIKIL  790 (793)
T ss_pred             -----------EEE---EEcCCCCeEEEecCCCcEEEE
Confidence                       677   999999999999999999998

>KOG0645|consensus

Probab=100.00  E-value=1.3e-31  Score=217.92  Aligned_cols=283  Identities=14%  Similarity=0.142  Sum_probs=221.9

Q ss_pred             eeeeeeeeeccCC-cceEEEecCcceEEEEEcCcc---ceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942          3 FCVTCFDVIPQIT-SEFSVHCGRDKVLFTWDLSSR---KQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEK   76 (537)
Q Consensus         3 ~~V~~~~~~~~~~-~~~l~s~~~~g~v~iwd~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (537)
                      ..|-.++++  |. |..|+|+|.|+.|+||+..++   .+...+.  +...+..+  .++|        .+++|++++-|
T Consensus        15 ~r~W~~awh--p~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsv--Awsp--------~g~~La~aSFD   82 (312)
T KOG0645|consen   15 DRVWSVAWH--PGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSV--AWSP--------HGRYLASASFD   82 (312)
T ss_pred             CcEEEEEec--cCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeee--eecC--------CCcEEEEeecc
Confidence            357889999  55 889999999999999999853   3333333  66778888  7799        66899999999


Q ss_pred             ceEEeeeccce--ehhhhcCCCc-ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         77 SLLHYYETSAV--KELYQHGLSS-PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        77 ~~i~~wd~~~~--~~~~~~~~~~-~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                      .++.+|.=..+  +++..+.+|+ .|.+++||++|.+||++++|+.|-||.+..+..        .++...++.|...|.
T Consensus        83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE--------fec~aVL~~HtqDVK  154 (312)
T KOG0645|consen   83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE--------FECIAVLQEHTQDVK  154 (312)
T ss_pred             ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc--------EEEEeeecccccccc
Confidence            99999976543  6788898885 999999999999999999999999999885322        788999999999999


Q ss_pred             hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEE
Q psy10942        154 DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~  231 (537)
                      .+.|+ |....|++++.+..    |                 ++|+-.    ......+.  +.     +|  ...|.++
T Consensus       155 ~V~WH-Pt~dlL~S~SYDnT----I-----------------k~~~~~----~dddW~c~~tl~-----g~--~~TVW~~  201 (312)
T KOG0645|consen  155 HVIWH-PTEDLLFSCSYDNT----I-----------------KVYRDE----DDDDWECVQTLD-----GH--ENTVWSL  201 (312)
T ss_pred             EEEEc-CCcceeEEeccCCe----E-----------------EEEeec----CCCCeeEEEEec-----Cc--cceEEEE
Confidence            99999 67788899998888    9                 888760    01233444  77     99  9999999


Q ss_pred             eccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC--ceee
Q psy10942        232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG--LKLL  309 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~--~~~~  309 (537)
                         +|++.|..|++++.|++++  +|.....-   ......++..+...    -..|++++.|+.|++|.....  ....
T Consensus       202 ---~F~~~G~rl~s~sdD~tv~--Iw~~~~~~---~~~~sr~~Y~v~W~----~~~IaS~ggD~~i~lf~~s~~~d~p~~  269 (312)
T KOG0645|consen  202 ---AFDNIGSRLVSCSDDGTVS--IWRLYTDL---SGMHSRALYDVPWD----NGVIASGGGDDAIRLFKESDSPDEPSW  269 (312)
T ss_pred             ---EecCCCceEEEecCCcceE--eeeeccCc---chhcccceEeeeec----ccceEeccCCCEEEEEEecCCCCCchH
Confidence               9999999999999999999  99955321   11111112222222    147999999999999987642  1222


Q ss_pred             eeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcc
Q psy10942        310 NVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~  350 (537)
                      ..+......|...|++++|+|. .++|++++.||.+++|.+.
T Consensus       270 ~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  270 NLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             HHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            2323345678999999999994 7899999999999999875

>KOG0265|consensus

Probab=100.00  E-value=2.2e-31  Score=219.69  Aligned_cols=285  Identities=15%  Similarity=0.183  Sum_probs=228.5

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec-cceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET-SAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNIS  121 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~-~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~  121 (537)
                      +...|-.+  .+.|        ++.+++++|.|..|.+|+. ..-+....+++| ++|..+.|.+|++.|++++.|.+++
T Consensus        46 h~geI~~~--~F~P--------~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~  115 (338)
T KOG0265|consen   46 HKGEIYTI--KFHP--------DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVR  115 (338)
T ss_pred             CcceEEEE--EECC--------CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEE
Confidence            44455556  5688        7799999999999999995 344556666666 6999999999999999999999999


Q ss_pred             EEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       122 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                      .||+++           ++..+.+++|.+.|+++.-  .+-+..+++++..+  +++                 ++||+ 
T Consensus       116 ~wD~~t-----------G~~~rk~k~h~~~vNs~~p--~rrg~~lv~SgsdD--~t~-----------------kl~D~-  162 (338)
T KOG0265|consen  116 GWDAET-----------GKRIRKHKGHTSFVNSLDP--SRRGPQLVCSGSDD--GTL-----------------KLWDI-  162 (338)
T ss_pred             EEeccc-----------ceeeehhccccceeeecCc--cccCCeEEEecCCC--ceE-----------------EEEee-
Confidence            999999           7999999999999999884  34444445555555  669                 99999 


Q ss_pred             HHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        202 LEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       202 ~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                            ++..+. +.     ..  .-+++++   .|..++..+.+|+-|+.|+  +|+++.+                  
T Consensus       163 ------R~k~~~~t~-----~~--kyqltAv---~f~d~s~qv~sggIdn~ik--vWd~r~~------------------  206 (338)
T KOG0265|consen  163 ------RKKEAIKTF-----EN--KYQLTAV---GFKDTSDQVISGGIDNDIK--VWDLRKN------------------  206 (338)
T ss_pred             ------cccchhhcc-----cc--ceeEEEE---EecccccceeeccccCcee--eeccccC------------------
Confidence                  777776 44     34  6788999   8988888888888888777  7777652                  


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC---CceeeE
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG---GLKLLN  357 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~---~~~~~~  357 (537)
                                               ..     ...+.+|..+|+.+..+|+|.++.+-+-|.++++||++.   ..+++.
T Consensus       207 -------------------------d~-----~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~  256 (338)
T KOG0265|consen  207 -------------------------DG-----LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVK  256 (338)
T ss_pred             -------------------------cc-----eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEE
Confidence                                     11     334578999999999999999999999999999999982   112233


Q ss_pred             EEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEE
Q psy10942        358 VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIK  437 (537)
Q Consensus       358 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~  437 (537)
                      .+.++..                              ....               .....+|+|+++.+..|+.|..++
T Consensus       257 if~g~~h------------------------------nfek---------------nlL~cswsp~~~~i~ags~dr~vy  291 (338)
T KOG0265|consen  257 IFQGHIH------------------------------NFEK---------------NLLKCSWSPNGTKITAGSADRFVY  291 (338)
T ss_pred             Eeecchh------------------------------hhhh---------------hcceeeccCCCCccccccccceEE
Confidence            3332211                              0000               455678999999999999999999


Q ss_pred             EEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       438 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      +||......+..+.+|.+.|+++.|+|...+|.+++.|.+|++=+
T Consensus       292 vwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  292 VWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             EeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence            999999999999999999999999999999999999999998744

>KOG0281|consensus

Probab=100.00  E-value=5.4e-33  Score=233.56  Aligned_cols=266  Identities=17%  Similarity=0.215  Sum_probs=225.0

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      .|-|+.|.    .+.+++|.+|++|+|||.++.+.++.+. +...+.++.+            +.+.+++|++|.+|++|
T Consensus       199 gVYClQYD----D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy------------d~rviisGSSDsTvrvW  262 (499)
T KOG0281|consen  199 GVYCLQYD----DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY------------DERVIVSGSSDSTVRVW  262 (499)
T ss_pred             ceEEEEec----chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec------------cceEEEecCCCceEEEE
Confidence            35566665    3569999999999999999998888776 5555555555            77899999999999999


Q ss_pred             eccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         83 ETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        83 d~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                      |+++|+++.++-+| +.|..+.|+.  .++++++.|.++.+||+....        ...+.+.+.||...|+.+.|+   
T Consensus       263 Dv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps--------~it~rrVLvGHrAaVNvVdfd---  329 (499)
T KOG0281|consen  263 DVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPT--------DITLRRVLVGHRAAVNVVDFD---  329 (499)
T ss_pred             eccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCch--------HHHHHHHHhhhhhheeeeccc---
Confidence            99999999998877 7999999975  489999999999999998732        256677889999999999998   


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccC
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKE  239 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~  239 (537)
                      ++++++|+++..    |                 ++|+.       .+.+++  +.     ||  ...|.|+   .+  .
T Consensus       330 ~kyIVsASgDRT----i-----------------kvW~~-------st~efvRtl~-----gH--kRGIACl---QY--r  369 (499)
T KOG0281|consen  330 DKYIVSASGDRT----I-----------------KVWST-------STCEFVRTLN-----GH--KRGIACL---QY--R  369 (499)
T ss_pred             cceEEEecCCce----E-----------------EEEec-------cceeeehhhh-----cc--cccceeh---hc--c
Confidence            679999999888    9                 99999       999988  88     99  9999999   66  5


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCCCeEEEEECCCCceeee---
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLDKTVKVWSTTGGLKLLN---  310 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d~~i~i~~~~~~~~~~~---  310 (537)
                      ++++++|+.|.+|+  +|++..    ..|     ++.+.+|..  .++    ..+++|..||+|++||+.++.....   
T Consensus       370 ~rlvVSGSSDntIR--lwdi~~----G~c-----LRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aaldpra~~~  438 (499)
T KOG0281|consen  370 DRLVVSGSSDNTIR--LWDIEC----GAC-----LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS  438 (499)
T ss_pred             CeEEEecCCCceEE--EEeccc----cHH-----HHHHhchHHhhhheeecCceeeeccccceEEEEecccccCCccccc
Confidence            78999999999999  999999    556     888889887  555    7899999999999999987754321   


Q ss_pred             -eecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy10942        311 -VLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG  351 (537)
Q Consensus       311 -~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~  351 (537)
                       +....+..|.+.|..+.|  |...+++++.|.+|.+||...
T Consensus       439 ~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~  478 (499)
T KOG0281|consen  439 TLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLN  478 (499)
T ss_pred             chHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCC
Confidence             113456778999999999  467889999999999999873

>KOG0266|consensus

Probab=100.00  E-value=2.4e-31  Score=254.92  Aligned_cols=275  Identities=20%  Similarity=0.275  Sum_probs=233.9

Q ss_pred             CcEEEEEeCccceEEeeecccee--hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVK--ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      ++.++++++.++.+++|+...++  .++.+..| ..|..++|+||++++++++.|++|+|||+...          ...+
T Consensus       170 ~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~----------~~~~  239 (456)
T KOG0266|consen  170 DGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD----------GRNL  239 (456)
T ss_pred             CCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC----------CeEE
Confidence            66789999999999999998887  67776544 69999999999999999999999999999442          6889


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL  220 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~  220 (537)
                      +++++|...|++++|+ +.++.+++++.++.    |                 ++||+       +++++.  +.     
T Consensus       240 ~~l~gH~~~v~~~~f~-p~g~~i~Sgs~D~t----v-----------------riWd~-------~~~~~~~~l~-----  285 (456)
T KOG0266|consen  240 KTLKGHSTYVTSVAFS-PDGNLLVSGSDDGT----V-----------------RIWDV-------RTGECVRKLK-----  285 (456)
T ss_pred             EEecCCCCceEEEEec-CCCCEEEEecCCCc----E-----------------EEEec-------cCCeEEEeee-----
Confidence            9999999999999999 56688888888887    9                 99999       888877  88     


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      +|  ...|.++   +|++++++|++++.|+.++  +||+..+.                                 +.  
T Consensus       286 ~h--s~~is~~---~f~~d~~~l~s~s~d~~i~--vwd~~~~~---------------------------------~~--  323 (456)
T KOG0266|consen  286 GH--SDGISGL---AFSPDGNLLVSASYDGTIR--VWDLETGS---------------------------------KL--  323 (456)
T ss_pred             cc--CCceEEE---EECCCCCEEEEcCCCccEE--EEECCCCc---------------------------------ee--
Confidence            99  9999999   9999999999999999999  99988832                                 11  


Q ss_pred             ECCCCceeeeeecccccccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEK--DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  378 (537)
                            .     ...+..+..  ++++++|+|++.++++++.|+.+++||+. ..........|..+.            
T Consensus       324 ------~-----~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~-~~~~~~~~~~~~~~~------------  379 (456)
T KOG0266|consen  324 ------C-----LKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR-SGKSVGTYTGHSNLV------------  379 (456)
T ss_pred             ------e-----eecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc-CCcceeeecccCCcc------------
Confidence                  0     111112222  69999999999999999999999999999 777777777665520            


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-Ccce
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASV  457 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v  457 (537)
                                          .              .+.+..+++.++++++|+.|+.|++||+.++..+..+.+| ...+
T Consensus       380 --------------------~--------------~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~  425 (456)
T KOG0266|consen  380 --------------------R--------------CIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAV  425 (456)
T ss_pred             --------------------e--------------eEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCce
Confidence                                0              4444556888999999999999999999999999999999 8889


Q ss_pred             EEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy10942        458 LRCHFINKGTQIVSTG--ADGLLKLWSIK  484 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~--~dg~v~vwd~~  484 (537)
                      ..+.++|..+++++++  .|+.+++|..+
T Consensus       426 ~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  426 SDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             eccccCCCcCeeeecCcCCCceEEEecCC
Confidence            9999999999999998  68999999753

>KOG0292|consensus

Probab=99.98  E-value=4.4e-31  Score=247.77  Aligned_cols=303  Identities=16%  Similarity=0.221  Sum_probs=245.1

Q ss_pred             EeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcc
Q psy10942         54 FHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLE  132 (537)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~  132 (537)
                      .+.|        ..+.++++-.+|.|++||..-+.++.++..| ++|..++|.|++.++++|+.|-.|++|++++     
T Consensus        16 sFHP--------~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~-----   82 (1202)
T KOG0292|consen   16 SFHP--------KRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-----   82 (1202)
T ss_pred             ecCC--------CCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc-----
Confidence            6688        7799999999999999999999999999866 6999999999999999999999999999999     


Q ss_pred             cccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc
Q psy10942        133 ERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ  212 (537)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~  212 (537)
                            .+++.++.||-+.|..+.|+ +.-..+++++.+..    |                 +||+.       ++..+
T Consensus        83 ------rrclftL~GHlDYVRt~~FH-heyPWIlSASDDQT----I-----------------rIWNw-------qsr~~  127 (1202)
T KOG0292|consen   83 ------RRCLFTLLGHLDYVRTVFFH-HEYPWILSASDDQT----I-----------------RIWNW-------QSRKC  127 (1202)
T ss_pred             ------ceehhhhccccceeEEeecc-CCCceEEEccCCCe----E-----------------EEEec-------cCCce
Confidence                  89999999999999999999 77788999999988    9                 99999       99999


Q ss_pred             c--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE
Q psy10942        213 Q--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS  290 (537)
Q Consensus       213 ~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~  290 (537)
                      +  +.     ||  ...|.|.   +|+|....+++++-|.+||  +||+..-....    .++. .+..+.        .
T Consensus       128 iavlt-----GH--nHYVMcA---qFhptEDlIVSaSLDQTVR--VWDisGLRkk~----~~pg-~~e~~~--------~  182 (1202)
T KOG0292|consen  128 IAVLT-----GH--NHYVMCA---QFHPTEDLIVSASLDQTVR--VWDISGLRKKN----KAPG-SLEDQM--------R  182 (1202)
T ss_pred             EEEEe-----cC--ceEEEee---ccCCccceEEEecccceEE--EEeecchhccC----CCCC-Cchhhh--------h
Confidence            8  88     99  9999999   9999999999999999999  99998732111    1111 000000        0


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEE
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVS  370 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~  370 (537)
                      +.. +..   |+-..  .-.+.+..+.+|...|+.++|+|.-.++++|++|..|++|.+..+ +                
T Consensus       183 ~~~-~~~---dLfg~--~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnet-K----------------  239 (1202)
T KOG0292|consen  183 GQQ-GNS---DLFGQ--TDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET-K----------------  239 (1202)
T ss_pred             ccc-cch---hhcCC--cCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccc-c----------------
Confidence            000 000   11000  001125567899999999999999999999999999999999822 1                


Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL  450 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  450 (537)
                              .|.+.+      ..+|..                 .|.++-|+|...++++.++|++|++||+...+.++++
T Consensus       240 --------aWEvDt------crgH~n-----------------nVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf  288 (1202)
T KOG0292|consen  240 --------AWEVDT------CRGHYN-----------------NVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF  288 (1202)
T ss_pred             --------ceeehh------hhcccC-----------------CcceEEecCccceeEecCCCccEEEEecccccceeee
Confidence                    232221      223433                 7888889999999999999999999999999999999


Q ss_pred             ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       451 ~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      +...+....++-+|..+++|+| .|+-+.||.++
T Consensus       289 rrendRFW~laahP~lNLfAAg-HDsGm~VFkle  321 (1202)
T KOG0292|consen  289 RRENDRFWILAAHPELNLFAAG-HDSGMIVFKLE  321 (1202)
T ss_pred             eccCCeEEEEEecCCcceeeee-cCCceEEEEEc
Confidence            8778889999999999877766 55557777775

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.98  E-value=1.6e-30  Score=268.62  Aligned_cols=314  Identities=16%  Similarity=0.106  Sum_probs=226.1

Q ss_pred             cceEEeeeccceehhhhcC------CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch
Q psy10942         76 KSLLHYYETSAVKELYQHG------LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS  149 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~------~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  149 (537)
                      +|..++|+..+.+....+.      +.+.|.+++|+|+|++||+|+.|+.|+||+........   .........+.+ .
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~---~~~~~~~~~~~~-~  532 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDG---RDIHYPVVELAS-R  532 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccc---cccccceEEecc-c
Confidence            5667888877654432222      33689999999999999999999999999976411000   000112223333 4


Q ss_pred             hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCe
Q psy10942        150 DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKT  227 (537)
Q Consensus       150 ~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~  227 (537)
                      ..+.+++|+++.+..|++++.++.    |                 ++||+       .+++..  +.     +|  ...
T Consensus       533 ~~v~~l~~~~~~~~~las~~~Dg~----v-----------------~lWd~-------~~~~~~~~~~-----~H--~~~  577 (793)
T PLN00181        533 SKLSGICWNSYIKSQVASSNFEGV----V-----------------QVWDV-------ARSQLVTEMK-----EH--EKR  577 (793)
T ss_pred             CceeeEEeccCCCCEEEEEeCCCe----E-----------------EEEEC-------CCCeEEEEec-----CC--CCC
Confidence            568999999767778888777766    9                 99999       776655  66     99  999


Q ss_pred             EEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942        228 VTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       228 v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      |.++   +|+| ++.+|++|+.|+.++  +|++..+...........+..+..+.. .-..+++|+.||.|++||+....
T Consensus       578 V~~l---~~~p~~~~~L~Sgs~Dg~v~--iWd~~~~~~~~~~~~~~~v~~v~~~~~-~g~~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        578 VWSI---DYSSADPTLLASGSDDGSVK--LWSINQGVSIGTIKTKANICCVQFPSE-SGRSLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             EEEE---EEcCCCCCEEEEEcCCCEEE--EEECCCCcEEEEEecCCCeEEEEEeCC-CCCEEEEEeCCCeEEEEECCCCC
Confidence            9999   9996 789999999999999  999987432111111111111222111 11589999999999999998764


Q ss_pred             eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      ..    ...+.+|...|.++.|. ++..|++++.|+.|++||+......                           ...+
T Consensus       652 ~~----~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~---------------------------~~~~  699 (793)
T PLN00181        652 LP----LCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG---------------------------INET  699 (793)
T ss_pred             cc----ceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc---------------------------cCCc
Confidence            22    23456899999999997 6789999999999999998732100                           0112


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe-------------ecC
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-------------EGH  453 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------------~~~  453 (537)
                      ++..+.+|..                 .+..++|+|++++|++|+.|+.|++|+.....++..+             ..|
T Consensus       700 ~l~~~~gh~~-----------------~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~  762 (793)
T PLN00181        700 PLHSFMGHTN-----------------VKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDA  762 (793)
T ss_pred             ceEEEcCCCC-----------------CeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCC
Confidence            2333444443                 6777889999999999999999999998765443222             234


Q ss_pred             CcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        454 DASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      ...|.+++|+|++..|++|+.||.|+||++
T Consensus       763 ~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        763 SQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            566999999999999999999999999986

>KOG2106|consensus

Probab=99.98  E-value=2.7e-29  Score=221.56  Aligned_cols=426  Identities=13%  Similarity=0.122  Sum_probs=301.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcc--------eEEEEEcCccceeeeecccc-ccceeeeEeecCccccccCCcEEEEE-
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDK--------VLFTWDLSSRKQLRSYPAYE-SLETCAVFHLSDETESKSGGKTFVLA-   72 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g--------~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-   72 (537)
                      .+|.|++++  ||...+++|-..|        .++|||..+-+.++.+..++ .+.+++|  ++..      .+.++.. 
T Consensus       105 ddikc~~vH--Pdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaF--sk~~------~G~~l~~v  174 (626)
T KOG2106|consen  105 DDIKCMAVH--PDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAF--SKIN------GGSLLCAV  174 (626)
T ss_pred             CceEEEeec--CCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeee--cccC------CCceEEEe
Confidence            578999999  8888888773333        59999988877777766444 4555644  4431      3334333 


Q ss_pred             -eCccceEEeeeccceehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeE---Eeec
Q psy10942         73 -GGEKSLLHYYETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK---QFVG  147 (537)
Q Consensus        73 -~~~~~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~  147 (537)
                       -+.+..+.+||++.+......+ .++.|....|.|.+..|.+....+.+.+|+..++           .+.+   .++.
T Consensus       175 D~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~-----------~l~k~~~~fek  243 (626)
T KOG2106|consen  175 DDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGG-----------SLVKRQGIFEK  243 (626)
T ss_pred             cCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCC-----------ceEEEeecccc
Confidence             4667789999999988877777 4478999999998776666566699999999883           3332   2333


Q ss_pred             ch-hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCC
Q psy10942        148 FS-DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDE  224 (537)
Q Consensus       148 ~~-~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~  224 (537)
                      ++ ..|.|++|. +++.. +++..++.    |                 .||+.       .+.+..  ..     .|  
T Consensus       244 ~ekk~Vl~v~F~-engdv-iTgDS~G~----i-----------------~Iw~~-------~~~~~~k~~~-----aH--  286 (626)
T KOG2106|consen  244 REKKFVLCVTFL-ENGDV-ITGDSGGN----I-----------------LIWSK-------GTNRISKQVH-----AH--  286 (626)
T ss_pred             ccceEEEEEEEc-CCCCE-EeecCCce----E-----------------EEEeC-------CCceEEeEee-----ec--
Confidence            32 458999998 55543 45554444    9                 99998       444433  44     89  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc----cccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV----PEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      .+.|.++   +.-.+|.+|- |+.|+.|.  .|+-.-.  +......    .+++.....  .  .-++.|...+.|..=
T Consensus       287 ~ggv~~L---~~lr~GtllS-GgKDRki~--~Wd~~y~--k~r~~elPe~~G~iRtv~e~--~--~di~vGTtrN~iL~G  354 (626)
T KOG2106|consen  287 DGGVFSL---CMLRDGTLLS-GGKDRKII--LWDDNYR--KLRETELPEQFGPIRTVAEG--K--GDILVGTTRNFILQG  354 (626)
T ss_pred             CCceEEE---EEecCccEee-cCccceEE--ecccccc--ccccccCchhcCCeeEEecC--C--CcEEEeeccceEEEe
Confidence            9999999   8888886555 99999999  9993221  1111000    001111110  0  126677777777776


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC------CceeeEEEEecCCCCEEEEEcCC
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG------GLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                      .++++-.      ....+|......++.+|+.+.+++++.|+.+++|+-..      -..+......|+.| .++.|+..
T Consensus       355 t~~~~f~------~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~  427 (626)
T KOG2106|consen  355 TLENGFT------LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTAT  427 (626)
T ss_pred             eecCCce------EEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEecCceeEeeccCcc-eEEEeecc
Confidence            7776653      33468889999999999999999999999999999221      12334556778888 99999999


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEe-ec
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSL-EG  452 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~-~~  452 (537)
                      |...+.|.++...+..-.. ..                 +++.+.|+|+|.+||.|+.|+.|++|-+.. +...... +.
T Consensus       428 G~w~V~d~e~~~lv~~~~d-~~-----------------~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~  489 (626)
T KOG2106|consen  428 GRWFVLDTETQDLVTIHTD-NE-----------------QLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKC  489 (626)
T ss_pred             ceEEEEecccceeEEEEec-CC-----------------ceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeee
Confidence            9999999999655544333 33                 888999999999999999999999998865 3333332 33


Q ss_pred             CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec------------------CCccceeccCCCCCCcccccc
Q psy10942        453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD------------------KHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~------------------~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      |..+|+.+.||+|+++|.+-+.|-.|-.|....-+.+...+                  .+...+           ..+ 
T Consensus       490 ~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i-----------~a~-  557 (626)
T KOG2106|consen  490 SGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDI-----------NAV-  557 (626)
T ss_pred             cCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchH-----------HHh-
Confidence            45889999999999999999999999999543322221111                  112222           455 


Q ss_pred             ceeeecCCCEEEEEeCCCCEEeC
Q psy10942        515 RQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                        +-+.+.++||+|.+.|+|++|
T Consensus       558 --~rs~~~~~lA~gdd~g~v~lf  578 (626)
T KOG2106|consen  558 --ARSHCEKLLASGDDFGKVHLF  578 (626)
T ss_pred             --hhhhhhhhhhccccCceEEEE
Confidence              888899999999999999986

>KOG1063|consensus

Probab=99.98  E-value=7.7e-30  Score=233.42  Aligned_cols=451  Identities=18%  Similarity=0.208  Sum_probs=309.7

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccc--eee--eeccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK--QLR--SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      |+.|+++.  ...........|+++.+||.+..+  +..  .+...+.+. +++..+|.      .+...++.++.+..|
T Consensus       101 ~~~~~cv~--a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ip-LcL~~~~~------~~~~lla~Ggs~~~v  171 (764)
T KOG1063|consen  101 CKECVCVV--ARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIP-LCLAALKN------NKTFLLACGGSKFVV  171 (764)
T ss_pred             ceeEEEEE--eeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhh-HHHhhhcc------CCcEEEEecCcceEE
Confidence            56777777  333333333789999999985544  122  222232222 22223442      266677888889989


Q ss_pred             Eeeeccce--ehhhhcCCC-cceEEEEEecccc---EEEEEeCCceEEEEecccccCcc---------cccccc-ccee-
Q psy10942         80 HYYETSAV--KELYQHGLS-SPLVRIVRSSVKR---MYAVVTADHNISLYRLNSETGLE---------ERPNKI-LKFR-  142 (537)
Q Consensus        80 ~~wd~~~~--~~~~~~~~~-~~v~~~~~s~~~~---~la~~~~d~~i~iwd~~~~~~~~---------~~~~~~-~~~~-  142 (537)
                      .++.-..+  +.+..+.+| ++|.+++|..-+.   +||+++.|..||||.+.-.....         ..++.+ .... 
T Consensus       172 ~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~  251 (764)
T KOG1063|consen  172 DLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILE  251 (764)
T ss_pred             EEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeee
Confidence            99876543  456677766 6999999976443   79999999999999886432110         000000 1111 


Q ss_pred             ---------EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc--c
Q psy10942        143 ---------KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS--S  211 (537)
Q Consensus       143 ---------~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~--~  211 (537)
                               ..+.||+++|+++.|+ |....|++++.|..    +                 .+|..       ...  -
T Consensus       252 ~i~~~is~eall~GHeDWV~sv~W~-p~~~~LLSASaDks----m-----------------iiW~p-------d~~tGi  302 (764)
T KOG1063|consen  252 EIQYRISFEALLMGHEDWVYSVWWH-PEGLDLLSASADKS----M-----------------IIWKP-------DENTGI  302 (764)
T ss_pred             eEEEEEehhhhhcCcccceEEEEEc-cchhhheecccCcc----e-----------------EEEec-------CCccce
Confidence                     1234899999999999 56667789999888    8                 88977       333  2


Q ss_pred             cc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc--
Q psy10942        212 QQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV--  285 (537)
Q Consensus       212 ~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v--  285 (537)
                      -.  +...+..|.  .......   .|+|+++.+++-+..|..+  +|...+. .....     ...+.+|.+  ..+  
T Consensus       303 Wv~~vRlGe~gg~--a~GF~g~---lw~~n~~~ii~~g~~Gg~h--lWkt~d~-~~w~~-----~~~iSGH~~~V~dv~W  369 (764)
T KOG1063|consen  303 WVDVVRLGEVGGS--AGGFWGG---LWSPNSNVIIAHGRTGGFH--LWKTKDK-TFWTQ-----EPVISGHVDGVKDVDW  369 (764)
T ss_pred             EEEEEEeeccccc--ccceeeE---EEcCCCCEEEEecccCcEE--EEeccCc-cceee-----ccccccccccceeeee
Confidence            11  222222244  5567777   8999999999999999999  9993331 11111     344455554  222  


Q ss_pred             ----eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC---------
Q psy10942        286 ----ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG---------  352 (537)
Q Consensus       286 ----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~---------  352 (537)
                          .++++.+.|.+-|+|-.-..+...-- ....+-|.-.++|++|-+....+++|.+...+++|+....         
T Consensus       370 ~psGeflLsvs~DQTTRlFa~wg~q~~wHE-iaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~  448 (764)
T KOG1063|consen  370 DPSGEFLLSVSLDQTTRLFARWGRQQEWHE-IARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAIC  448 (764)
T ss_pred             cCCCCEEEEeccccceeeecccccccceee-ecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHh
Confidence                79999999999999977633322211 2334567788999999986778899999999999986510         


Q ss_pred             ----------------------c------------------------------------------------------eee
Q psy10942        353 ----------------------L------------------------------------------------------KLL  356 (537)
Q Consensus       353 ----------------------~------------------------------------------------------~~~  356 (537)
                                            .                                                      -.+
T Consensus       449 g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv  528 (764)
T KOG1063|consen  449 GKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEV  528 (764)
T ss_pred             CccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeE
Confidence                                  0                                                      001


Q ss_pred             EEEEecCCCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942        357 NVLRGHKKGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS  431 (537)
Q Consensus       357 ~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  431 (537)
                      ..+...+++++++++...     ..|++|+..+-.....+.+|+-                 .|+.++|||||++|++.+
T Consensus       529 ~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL-----------------TVT~l~FSpdg~~LLsvs  591 (764)
T KOG1063|consen  529 YALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL-----------------TVTRLAFSPDGRYLLSVS  591 (764)
T ss_pred             EEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce-----------------EEEEEEECCCCcEEEEee
Confidence            111112236777777654     3589999999888888888886                 889999999999999999


Q ss_pred             CCCcEEEEECCCce----eeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC--eeEEE--ecCCccceeccC
Q psy10942        432 GDATIKLWCLTDYV----CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS--TCVST--FDKHALKIRNSD  503 (537)
Q Consensus       432 ~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~--~~~~~--~~~~~~~i~~~~  503 (537)
                      .|.++.+|......    .....+.|..-|.++.|+|++.+++|+|.|.+|++|.....  +.+..  ...+..++    
T Consensus       592 RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aV----  667 (764)
T KOG1063|consen  592 RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAV----  667 (764)
T ss_pred             cCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCce----
Confidence            99999999875422    12336789999999999999999999999999999998877  44433  33566777    


Q ss_pred             CCCCCccccccceeeecC-----CCEEEEEeCCCCEEeC
Q psy10942        504 SENDHKGFGLPRQLCSRN-----SDCEYRGGWSPQVVVY  537 (537)
Q Consensus       504 ~~~~~~~~~~~~~~~s~~-----~~~l~s~~~dg~i~vW  537 (537)
                             +++   ++.|-     +..+++|-..|.|.+|
T Consensus       668 -------TAv---~~~~~~~~e~~~~vavGle~GeI~l~  696 (764)
T KOG1063|consen  668 -------TAV---AYLPVDHNEKGDVVAVGLEKGEIVLW  696 (764)
T ss_pred             -------eeE---EeeccccccccceEEEEecccEEEEE
Confidence                   777   66542     3367788889999887

>KOG0316|consensus

Probab=99.97  E-value=4.9e-31  Score=210.06  Aligned_cols=272  Identities=17%  Similarity=0.216  Sum_probs=225.8

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      .++|.++.|+-||+|.++++.|.+|++|+...           +.+++++.+|...|..++.+ .|+..++++.+++.  
T Consensus        17 qgaV~avryN~dGnY~ltcGsdrtvrLWNp~r-----------g~liktYsghG~EVlD~~~s-~Dnskf~s~GgDk~--   82 (307)
T KOG0316|consen   17 QGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLR-----------GALIKTYSGHGHEVLDAALS-SDNSKFASCGGDKA--   82 (307)
T ss_pred             ccceEEEEEccCCCEEEEcCCCceEEeecccc-----------cceeeeecCCCceeeecccc-ccccccccCCCCce--
Confidence            37999999999999999999999999999998           79999999999999999998 78888888888888  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                        +                 .+||+       ++++..  +.     +|  .+.|..+   +|+.+...+++|+.|..++
T Consensus        83 --v-----------------~vwDV-------~TGkv~Rr~r-----gH--~aqVNtV---~fNeesSVv~SgsfD~s~r  126 (307)
T KOG0316|consen   83 --V-----------------QVWDV-------NTGKVDRRFR-----GH--LAQVNTV---RFNEESSVVASGSFDSSVR  126 (307)
T ss_pred             --E-----------------EEEEc-------ccCeeeeecc-----cc--cceeeEE---EecCcceEEEeccccceeE
Confidence              9                 99999       999988  88     99  9999999   9999999999999999999


Q ss_pred             eccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                        +||.+......       ++.+....+  .++    ..+++|+.||+++.||++.+...       ......+|+++.
T Consensus       127 --~wDCRS~s~eP-------iQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~-------sDy~g~pit~vs  190 (307)
T KOG0316|consen  127 --LWDCRSRSFEP-------IQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLS-------SDYFGHPITSVS  190 (307)
T ss_pred             --EEEcccCCCCc-------cchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceee-------hhhcCCcceeEE
Confidence              99998864332       333333333  222    67899999999999999988642       233456899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      |++|++..+.++-|+++++.|-. +++.+..+.+|.+..                                         
T Consensus       191 ~s~d~nc~La~~l~stlrLlDk~-tGklL~sYkGhkn~e-----------------------------------------  228 (307)
T KOG0316|consen  191 FSKDGNCSLASSLDSTLRLLDKE-TGKLLKSYKGHKNME-----------------------------------------  228 (307)
T ss_pred             ecCCCCEEEEeeccceeeecccc-hhHHHHHhcccccce-----------------------------------------
Confidence            99999999999999999999888 667777776665411                                         


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                            .-...+++.....+++|++||.|.+||+.....+..+..+... |.++.++|.-..++++... .+..|-
T Consensus       229 ------ykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~-~~~~~~  297 (307)
T KOG0316|consen  229 ------YKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGH-GDLFWY  297 (307)
T ss_pred             ------eeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCC-ceecee
Confidence                  2233456666778999999999999999999999999988777 8999999987777777543 456664

>KOG0293|consensus

Probab=99.97  E-value=2.5e-31  Score=228.53  Aligned_cols=268  Identities=15%  Similarity=0.239  Sum_probs=219.1

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccce---eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ---LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      -|..+.||  ++|++|+|++.|.+..||++.....   .+++. +..++..+  .++|        +.+++++.+.+..+
T Consensus       226 EVWfl~FS--~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi--~wSP--------DdryLlaCg~~e~~  293 (519)
T KOG0293|consen  226 EVWFLQFS--HNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYI--MWSP--------DDRYLLACGFDEVL  293 (519)
T ss_pred             cEEEEEEc--CCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEE--EECC--------CCCeEEecCchHhe
Confidence            47789999  9999999999999999998865444   44444 55566666  7899        66888888889999


Q ss_pred             EeeeccceehhhhcCCC--cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc-hhhhhhhh
Q psy10942         80 HYYETSAVKELYQHGLS--SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF-SDEILDIA  156 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~  156 (537)
                      .+||..+|.+.+.+...  ..+.+++|.|||..+++|+.|+++..||+++            ......++- ...|.+++
T Consensus       294 ~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg------------n~~~~W~gvr~~~v~dla  361 (519)
T KOG0293|consen  294 SLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG------------NILGNWEGVRDPKVHDLA  361 (519)
T ss_pred             eeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc------------chhhcccccccceeEEEE
Confidence            99999999999888865  5899999999999999999999999999987            223333332 24588999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccC
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGK  235 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~  235 (537)
                      .. +|+..+++.+.+..    +                 ++++.       ++.... +-     ..  ..+|+++   .
T Consensus       362 it-~Dgk~vl~v~~d~~----i-----------------~l~~~-------e~~~dr~li-----se--~~~its~---~  402 (519)
T KOG0293|consen  362 IT-YDGKYVLLVTVDKK----I-----------------RLYNR-------EARVDRGLI-----SE--EQPITSF---S  402 (519)
T ss_pred             Ec-CCCcEEEEEecccc----e-----------------eeech-------hhhhhhccc-----cc--cCceeEE---E
Confidence            98 78888888887777    8                 99988       555555 33     34  6789999   9


Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC------cc-----eEEEEEeCCCeEEEEECCC
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG------TV-----ELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~------~v-----~~l~~~~~d~~i~i~~~~~  304 (537)
                      .|.|++++++.-.+..+.  +||+....    .     ++.+.+|...      |.     .++++|++|+.|+||+..+
T Consensus       403 iS~d~k~~LvnL~~qei~--LWDl~e~~----l-----v~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s  471 (519)
T KOG0293|consen  403 ISKDGKLALVNLQDQEIH--LWDLEENK----L-----VRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS  471 (519)
T ss_pred             EcCCCcEEEEEcccCeeE--Eeecchhh----H-----HHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccC
Confidence            999999999999999999  99999632    2     4444555441      11     7899999999999999999


Q ss_pred             CceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcc
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~  350 (537)
                      ++.     ...+.+|...|++++|+| +...+|+++.||+|+||.+.
T Consensus       472 gkl-----l~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~  513 (519)
T KOG0293|consen  472 GKL-----LAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS  513 (519)
T ss_pred             Cce-----eEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence            987     566789999999999999 55689999999999999876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.97  E-value=2.5e-30  Score=237.67  Aligned_cols=279  Identities=23%  Similarity=0.345  Sum_probs=226.6

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +..++.++  .+.|        ++.++++++.+|.+++|++.+++....+..+ ..+..+.|+|++++|++++.|+.|++
T Consensus         8 h~~~i~~~--~~~~--------~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i   77 (289)
T cd00200           8 HTGGVTCV--AFSP--------DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL   77 (289)
T ss_pred             cCCCEEEE--EEcC--------CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence            45667777  5577        6688999999999999999988777666655 57789999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||+.+           .+....+..|...+.++.|+ +++..+++++.++.    +                 .+||+  
T Consensus        78 ~~~~~-----------~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~----i-----------------~~~~~--  122 (289)
T cd00200          78 WDLET-----------GECVRTLTGHTSYVSSVAFS-PDGRILSSSSRDKT----I-----------------KVWDV--  122 (289)
T ss_pred             EEcCc-----------ccceEEEeccCCcEEEEEEc-CCCCEEEEecCCCe----E-----------------EEEEC--
Confidence            99998           56777888898889999999 55566655554555    8                 99999  


Q ss_pred             Hhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        203 EAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       203 ~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                           .+.+..  +.     .|  ...+.++   .|+|++.++++++.++.++  +|++...                  
T Consensus       123 -----~~~~~~~~~~-----~~--~~~i~~~---~~~~~~~~l~~~~~~~~i~--i~d~~~~------------------  167 (289)
T cd00200         123 -----ETGKCLTTLR-----GH--TDWVNSV---AFSPDGTFVASSSQDGTIK--LWDLRTG------------------  167 (289)
T ss_pred             -----CCcEEEEEec-----cC--CCcEEEE---EEcCcCCEEEEEcCCCcEE--EEEcccc------------------
Confidence                 655554  55     78  8899999   9999988888877788888  7777542                  


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  360 (537)
                                               +.     ...+..|...+.++.|+|+++.+++++.|+.+++||+. ..+.+..+.
T Consensus       168 -------------------------~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~-~~~~~~~~~  216 (289)
T cd00200         168 -------------------------KC-----VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS-TGKCLGTLR  216 (289)
T ss_pred             -------------------------cc-----ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECC-CCceecchh
Confidence                                     11     11123456689999999999999999999999999998 433333333


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      .+..                                                 .+.+++|+|++.++++++.++.|++||
T Consensus       217 ~~~~-------------------------------------------------~i~~~~~~~~~~~~~~~~~~~~i~i~~  247 (289)
T cd00200         217 GHEN-------------------------------------------------GVNSVAFSPDGYLLASGSEDGTIRVWD  247 (289)
T ss_pred             hcCC-------------------------------------------------ceEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence            2222                                                 778899999988899888899999999


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      +.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus       248 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         248 LRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             cCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            999999999999999999999999999999999999999996

>KOG1407|consensus

Probab=99.97  E-value=1.6e-30  Score=210.30  Aligned_cols=271  Identities=14%  Similarity=0.152  Sum_probs=221.0

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.+.+++|+.+|..||+++.|+++.+|+++...         .......++|.+.|-.++|.|+....++++++++.   
T Consensus        21 ~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r---------~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~---   88 (313)
T KOG1407|consen   21 QKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR---------FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT---   88 (313)
T ss_pred             hcceEEEEcccCceeeecccCCceEEEEecchh---------hhhhhcccCCCcchhhheeCCCCCcceEEecCCce---
Confidence            689999999999999999999999999998721         22223557899999999999999999999999998   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||.       +++++.  +.      .  ...-.-+   .|+|+|++++.+..|..|. 
T Consensus        89 -i-----------------r~wd~-------r~~k~~~~i~------~--~~eni~i---~wsp~g~~~~~~~kdD~it-  131 (313)
T KOG1407|consen   89 -I-----------------RIWDI-------RSGKCTARIE------T--KGENINI---TWSPDGEYIAVGNKDDRIT-  131 (313)
T ss_pred             -E-----------------EEEEe-------ccCcEEEEee------c--cCcceEE---EEcCCCCEEEEecCcccEE-
Confidence             9                 99999       888887  22      2  2333445   6999999999999999999 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       ..+.+.........+......+..+..+  ++++.....|.|.|.....-+.     ...++.|.....||.|+|+|++
T Consensus       132 -~id~r~~~~~~~~~~~~e~ne~~w~~~n--d~Fflt~GlG~v~ILsypsLkp-----v~si~AH~snCicI~f~p~Gry  203 (313)
T KOG1407|consen  132 -FIDARTYKIVNEEQFKFEVNEISWNNSN--DLFFLTNGLGCVEILSYPSLKP-----VQSIKAHPSNCICIEFDPDGRY  203 (313)
T ss_pred             -EEEecccceeehhcccceeeeeeecCCC--CEEEEecCCceEEEEecccccc-----ccccccCCcceEEEEECCCCce
Confidence             8888875433322233333344444323  5677777779999999987766     5667899999999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      ||+|+.|..+.+||+. ..-+.+.+.-+.=                                                 +
T Consensus       204 fA~GsADAlvSLWD~~-ELiC~R~isRldw-------------------------------------------------p  233 (313)
T KOG1407|consen  204 FATGSADALVSLWDVD-ELICERCISRLDW-------------------------------------------------P  233 (313)
T ss_pred             EeeccccceeeccChh-HhhhheeeccccC-------------------------------------------------c
Confidence            9999999999999998 5555555543322                                                 8


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                      |..+.||.||++||+|++|..|-|=++++|..+..++ +.++...++|+|...+||-++.|
T Consensus       234 VRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  234 VRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             eEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence            9999999999999999999999999999999999998 78899999999999999988765

>KOG0282|consensus

Probab=99.97  E-value=2.4e-31  Score=233.39  Aligned_cols=293  Identities=19%  Similarity=0.264  Sum_probs=229.5

Q ss_pred             hhhhcCCC-cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         89 ELYQHGLS-SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      .+..+.+| ..|.++.|.| .+.+|++++.|+.|+||++-..          ..+++++.+|..+|.+++|+ .++..++
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~----------~~~lrtf~gH~k~Vrd~~~s-~~g~~fL  274 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD----------RRCLRTFKGHRKPVRDASFN-NCGTSFL  274 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC----------cceehhhhcchhhhhhhhcc-ccCCeee
Confidence            34555544 6899999999 8899999999999999999875          78999999999999999999 8888888


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC-Ceeee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE-DLFPR  245 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~  245 (537)
                      +++-+..    +                 ++||.       +++++...     .|. ...+.|+   .|.|++ +.+++
T Consensus       275 S~sfD~~----l-----------------KlwDt-------ETG~~~~~-----f~~-~~~~~cv---kf~pd~~n~fl~  317 (503)
T KOG0282|consen  275 SASFDRF----L-----------------KLWDT-------ETGQVLSR-----FHL-DKVPTCV---KFHPDNQNIFLV  317 (503)
T ss_pred             eeeccee----e-----------------eeecc-------ccceEEEE-----Eec-CCCceee---ecCCCCCcEEEE
Confidence            9998888    9                 99999       99999933     331 5678899   999999 88999


Q ss_pred             ccCCCcceeccccccCCCccccc-ccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFG-IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      |+.|+.|+  .||++.+...... .....+..+.+...+  ..+++.+.|+++++|+...+..+..    ....+.-...
T Consensus       318 G~sd~ki~--~wDiRs~kvvqeYd~hLg~i~~i~F~~~g--~rFissSDdks~riWe~~~~v~ik~----i~~~~~hsmP  389 (503)
T KOG0282|consen  318 GGSDKKIR--QWDIRSGKVVQEYDRHLGAILDITFVDEG--RRFISSSDDKSVRIWENRIPVPIKN----IADPEMHTMP  389 (503)
T ss_pred             ecCCCcEE--EEeccchHHHHHHHhhhhheeeeEEccCC--ceEeeeccCccEEEEEcCCCccchh----hcchhhccCc
Confidence            99999999  9999986421111 000001112222222  6899999999999999988765322    2223334567


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      ++..+|++++++.-+.|+.|.++.+....+.                              ...+.+++|..        
T Consensus       390 ~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~------------------------------nkkK~feGh~v--------  431 (503)
T KOG0282|consen  390 CLTLHPNGKWFAAQSMDNYIAIFSTVPPFRL------------------------------NKKKRFEGHSV--------  431 (503)
T ss_pred             ceecCCCCCeehhhccCceEEEEeccccccc------------------------------CHhhhhcceec--------
Confidence            8999999999999999999999987621110                              11122333322        


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecC-CCEEEEEeCCCcEEEEE
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK-GTQIVSTGADGLLKLWS  482 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~vwd  482 (537)
                             .|.-..+.|||||++|++|+.||.+.+||.++-+.+..+++|.+++..+.|+|. ...+|+++.||.|++|+
T Consensus       432 -------aGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  432 -------AGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             -------cCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence                   124567899999999999999999999999999999999999999999999994 56899999999999996

>KOG2048|consensus

Probab=99.97  E-value=1.1e-28  Score=225.54  Aligned_cols=450  Identities=14%  Similarity=0.123  Sum_probs=316.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee-ee--ccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SY--PAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      ..|+|++|+  .+.+.|+.+-.+|.|.||++...-... .+  +....++.+  +|.+        + ..|++.+.+|.|
T Consensus        26 s~I~slA~s--~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L--~W~e--------~-~RLFS~g~sg~i   92 (691)
T KOG2048|consen   26 SEIVSLAYS--HKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESL--AWAE--------G-GRLFSSGLSGSI   92 (691)
T ss_pred             cceEEEEEe--ccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeE--EEcc--------C-CeEEeecCCceE
Confidence            368999999  888899999999999999998854333 33  355567777  5565        3 467788889999


Q ss_pred             EeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         80 HYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      .-||+.+++.++.+... +.|.+++.+|.+..+++|+.||.+..++...+.         .+..+.+....+.|.+++|+
T Consensus        93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~---------I~~~r~l~rq~sRvLslsw~  163 (691)
T KOG2048|consen   93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDK---------ITYKRSLMRQKSRVLSLSWN  163 (691)
T ss_pred             EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCce---------EEEEeecccccceEEEEEec
Confidence            99999999999888866 599999999999999999999977777766621         23334445556789999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCC--CcCeEEEEeccC
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRD--ELKTVTLLERGK  235 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~--~~~~v~~~~~~~  235 (537)
                       +++..++.++.++-    |                 ++||.       ..+... +..+...+-.  +..-|.++   .
T Consensus       164 -~~~~~i~~Gs~Dg~----I-----------------riwd~-------~~~~t~~~~~~~~d~l~k~~~~iVWSv---~  211 (691)
T KOG2048|consen  164 -PTGTKIAGGSIDGV----I-----------------RIWDV-------KSGQTLHIITMQLDRLSKREPTIVWSV---L  211 (691)
T ss_pred             -CCccEEEecccCce----E-----------------EEEEc-------CCCceEEEeeecccccccCCceEEEEE---E
Confidence             78888999888877    8                 99999       665554 1111111110  04456777   6


Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc------eEEEEEeCCCeEEEEECCCCce
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV------ELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v------~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      |-.++ .+++|...|++.  +||...+..         ......|..  .++      +.+++++.|+.|..|...+...
T Consensus       212 ~Lrd~-tI~sgDS~G~V~--FWd~~~gTL---------iqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~  279 (691)
T KOG2048|consen  212 FLRDS-TIASGDSAGTVT--FWDSIFGTL---------IQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS  279 (691)
T ss_pred             EeecC-cEEEecCCceEE--EEcccCcch---------hhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc
Confidence            66554 899999999999  999988543         223333332  111      6899999999999999887754


Q ss_pred             eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eeeEEEEecCCC--------CEEEEEcCCCcEE
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-KLLNVLRGHKKG--------TQIVSTGADGLLK  378 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~--------~~l~~~~~d~~i~  378 (537)
                      .... ......|...|.+++..++  .+++|+.|..+.+-...... ........++.+        ++++.--.+..+.
T Consensus       280 ~wv~-~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~  356 (691)
T KOG2048|consen  280 EWVI-NSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVD  356 (691)
T ss_pred             ceee-eccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEecccccc
Confidence            2222 3445678889999999877  89999999998887665210 011111222333        3344444455556


Q ss_pred             EEECCCC---------eeeeeeccCCcceEEEEEecCCCceEEee-----------------------------eeEEEE
Q psy10942        379 LWSIKTS---------TCVSTFDKHALKIWTLAITKDENQIITGG-----------------------------VWFVNF  420 (537)
Q Consensus       379 i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------------------i~~~~~  420 (537)
                      +|.+.+.         ...+........|.+.+.+|+|+.++.+.                             ...+.|
T Consensus       357 lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~f  436 (691)
T KOG2048|consen  357 LWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDPNVKVINVDDVPLALLDASAISF  436 (691)
T ss_pred             ceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeeccceEEEEeccCcceeEEEeccchhhhccceeeEE
Confidence            6655443         11222334556788899999999988653                             445566


Q ss_pred             cCCCCEEEEEe-CCCcEEEEECCCc--eeeeEee--cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942        421 SPLDRILISSS-GDATIKLWCLTDY--VCLKSLE--GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       421 s~~~~~l~~~~-~dg~i~i~d~~~~--~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                      +-|+..++..+ .+..+..+++.+.  +.+..+.  +....|..+..||+|++||+.+.+|.|.+|++++.+........
T Consensus       437 tid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rl  516 (691)
T KOG2048|consen  437 TIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRL  516 (691)
T ss_pred             EecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhcc
Confidence            66766666666 5667777776653  2233222  24567999999999999999999999999999988765544344


Q ss_pred             ccceeccCCCCCCccccccceeee-cCCCEEEEEeCCCCEE
Q psy10942        496 ALKIRNSDSENDHKGFGLPRQLCS-RNSDCEYRGGWSPQVV  535 (537)
Q Consensus       496 ~~~i~~~~~~~~~~~~~~~~~~~s-~~~~~l~s~~~dg~i~  535 (537)
                      ...+           +++   +|+ ++.+.|+.+..|+.+.
T Consensus       517 n~~v-----------Ta~---~~~~~~~~~lvvats~nQv~  543 (691)
T KOG2048|consen  517 NIDV-----------TAA---AFSPFVRNRLVVATSNNQVF  543 (691)
T ss_pred             Ccce-----------eee---eccccccCcEEEEecCCeEE
Confidence            5677           788   898 5667888888888764

>KOG1407|consensus

Probab=99.97  E-value=3.7e-29  Score=202.54  Aligned_cols=258  Identities=17%  Similarity=0.225  Sum_probs=216.2

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC---------CcceEEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG---------GTVELLASG  291 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~~~  291 (537)
                      +|  ...+.++   +|+.+|..|++|+.|+++.  +|++.....  ..     .....+|.+         ..-..++++
T Consensus        18 ~~--~~~v~Sv---~wn~~g~~lasgs~dktv~--v~n~e~~r~--~~-----~~~~~gh~~svdql~w~~~~~d~~ata   83 (313)
T KOG1407|consen   18 GH--VQKVHSV---AWNCDGTKLASGSFDKTVS--VWNLERDRF--RK-----ELVYRGHTDSVDQLCWDPKHPDLFATA   83 (313)
T ss_pred             hh--hhcceEE---EEcccCceeeecccCCceE--EEEecchhh--hh-----hhcccCCCcchhhheeCCCCCcceEEe
Confidence            88  8999999   9999999999999999999  999987521  11     223334432         111789999


Q ss_pred             eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee---------eEEEEec
Q psy10942        292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL---------LNVLRGH  362 (537)
Q Consensus       292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~---------~~~~~~~  362 (537)
                      +.|.+|++||.+.+++...+     .. ...=.-+.|+|+|+++++++.|..|...|.+ ..+.         ...+..+
T Consensus        84 s~dk~ir~wd~r~~k~~~~i-----~~-~~eni~i~wsp~g~~~~~~~kdD~it~id~r-~~~~~~~~~~~~e~ne~~w~  156 (313)
T KOG1407|consen   84 SGDKTIRIWDIRSGKCTARI-----ET-KGENINITWSPDGEYIAVGNKDDRITFIDAR-TYKIVNEEQFKFEVNEISWN  156 (313)
T ss_pred             cCCceEEEEEeccCcEEEEe-----ec-cCcceEEEEcCCCCEEEEecCcccEEEEEec-ccceeehhcccceeeeeeec
Confidence            99999999999999875543     12 2233457899999999999999999999988 3332         3445556


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      .++++++.....|+|.|......+++..++.|..                 ...++.|+|+|++||+|+.|..+.+||+.
T Consensus       157 ~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s-----------------nCicI~f~p~GryfA~GsADAlvSLWD~~  219 (313)
T KOG1407|consen  157 NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS-----------------NCICIEFDPDGRYFATGSADALVSLWDVD  219 (313)
T ss_pred             CCCCEEEEecCCceEEEEeccccccccccccCCc-----------------ceEEEEECCCCceEeeccccceeeccChh
Confidence            6688888888889999999999999999999886                 78889999999999999999999999999


Q ss_pred             CceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCC
Q psy10942        443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       443 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      ..-+++.+..+.-+|+.+.||.||++||++++|..|-|=++++|..+..++ +.++.           ..+   +|+|..
T Consensus       220 ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t-----------~tV---AWHPk~  284 (313)
T KOG1407|consen  220 ELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPT-----------FTV---AWHPKR  284 (313)
T ss_pred             HhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCc-----------eeE---EecCCC
Confidence            999999999999999999999999999999999999999999999988874 45566           778   999999


Q ss_pred             CEEEEEeCC
Q psy10942        523 DCEYRGGWS  531 (537)
Q Consensus       523 ~~l~s~~~d  531 (537)
                      .+||-+++|
T Consensus       285 ~LLAyA~dd  293 (313)
T KOG1407|consen  285 PLLAYACDD  293 (313)
T ss_pred             ceeeEEecC
Confidence            999988765

>KOG0643|consensus

Probab=99.97  E-value=1.2e-29  Score=206.03  Aligned_cols=283  Identities=13%  Similarity=0.125  Sum_probs=229.6

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +..+++.+.|+.+|.+|.+++.|.+..+|-..+           ++.+-++.||.+.|.++... .+..++++++++.. 
T Consensus         9 HERplTqiKyN~eGDLlFscaKD~~~~vw~s~n-----------GerlGty~GHtGavW~~Did-~~s~~liTGSAD~t-   75 (327)
T KOG0643|consen    9 HERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-----------GERLGTYDGHTGAVWCCDID-WDSKHLITGSADQT-   75 (327)
T ss_pred             CccccceEEecCCCcEEEEecCCCCceEEEecC-----------CceeeeecCCCceEEEEEec-CCcceeeeccccce-
Confidence            335899999999999999999999999998877           68899999999999999988 78889999999998 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                         +                 ++||+       ++++++ .-     ..  ..+|..+   .|+++|++++....+..-.
T Consensus        76 ---~-----------------kLWDv-------~tGk~la~~-----k~--~~~Vk~~---~F~~~gn~~l~~tD~~mg~  118 (327)
T KOG0643|consen   76 ---A-----------------KLWDV-------ETGKQLATW-----KT--NSPVKRV---DFSFGGNLILASTDKQMGY  118 (327)
T ss_pred             ---e-----------------EEEEc-------CCCcEEEEe-----ec--CCeeEEE---eeccCCcEEEEEehhhcCc
Confidence               9                 99999       999998 33     34  6789999   9999998887665432111


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC-------CceeeeeecccccccCCCeEEE
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG-------GLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~-------~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                                                              .+.|.++|++.       .++.     ..+..+.+.++.+
T Consensus       119 ----------------------------------------~~~v~~fdi~~~~~~~~s~ep~-----~kI~t~~skit~a  153 (327)
T KOG0643|consen  119 ----------------------------------------TCFVSVFDIRDDSSDIDSEEPY-----LKIPTPDSKITSA  153 (327)
T ss_pred             ----------------------------------------ceEEEEEEccCChhhhcccCce-----EEecCCccceeee
Confidence                                                    13444555442       2221     1234556889999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD  406 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  406 (537)
                      -|.|-++.|++|..||.|.+||++++.+.+.....|..                                          
T Consensus       154 ~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~------------------------------------------  191 (327)
T KOG0643|consen  154 LWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSS------------------------------------------  191 (327)
T ss_pred             eecccCCEEEEecCCCcEEEEEcccCceeeechhhhcc------------------------------------------
Confidence            99999999999999999999999966666666666654                                          


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc---------
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL---------  477 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~---------  477 (537)
                             .|+.++++||..++++++.|.+-++||..+.+.+.++. ...+|++.+++|...+++.++....         
T Consensus       192 -------~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r  263 (327)
T KOG0643|consen  192 -------KINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR  263 (327)
T ss_pred             -------ccccccccCCcceEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeeccc
Confidence                   88999999999999999999999999999999999988 5678999999997667666553211         


Q ss_pred             -----EEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        478 -----LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       478 -----v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                           .++|++-..+.+..+++|-++|           +++   +|+|+|+..++|+.||.||+
T Consensus       264 ~GKFEArFyh~i~eEEigrvkGHFGPI-----------Nsv---AfhPdGksYsSGGEDG~VR~  313 (327)
T KOG0643|consen  264 AGKFEARFYHLIFEEEIGRVKGHFGPI-----------NSV---AFHPDGKSYSSGGEDGYVRL  313 (327)
T ss_pred             ccchhhhHHHHHHHHHhccccccccCc-----------cee---EECCCCcccccCCCCceEEE
Confidence                 2333333346677889999999           999   99999999999999999997

>KOG0275|consensus

Probab=99.97  E-value=1.7e-30  Score=216.67  Aligned_cols=287  Identities=17%  Similarity=0.184  Sum_probs=229.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..+.|..|||||+||++++.||-|.+||..+++-.   .....+....+--+.+.|.|++|+ .|...+++++.++.   
T Consensus       214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlr---KDLkYQAqd~fMMmd~aVlci~FS-RDsEMlAsGsqDGk---  286 (508)
T KOG0275|consen  214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLR---KDLKYQAQDNFMMMDDAVLCISFS-RDSEMLASGSQDGK---  286 (508)
T ss_pred             cchhheeeCCCCceEeeccccceeeeehhccchhh---hhhhhhhhcceeecccceEEEeec-ccHHHhhccCcCCc---
Confidence            46889999999999999999999999999984211   011112222344578889999999 88888888877776   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++|.+       +++.|+  +.    ..|  ...|+|+   .|+.|+..+++++.|.+++ 
T Consensus       287 -I-----------------KvWri-------~tG~ClRrFd----rAH--tkGvt~l---~FSrD~SqiLS~sfD~tvR-  331 (508)
T KOG0275|consen  287 -I-----------------KVWRI-------ETGQCLRRFD----RAH--TKGVTCL---SFSRDNSQILSASFDQTVR-  331 (508)
T ss_pred             -E-----------------EEEEE-------ecchHHHHhh----hhh--ccCeeEE---EEccCcchhhcccccceEE-
Confidence             9                 99999       999998  32    289  9999999   9999999999988888777 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +--+..                                           ++.     ...+++|.+.|+...|.+||+.
T Consensus       332 -iHGlKS-------------------------------------------GK~-----LKEfrGHsSyvn~a~ft~dG~~  362 (508)
T KOG0275|consen  332 -IHGLKS-------------------------------------------GKC-----LKEFRGHSSYVNEATFTDDGHH  362 (508)
T ss_pred             -Eecccc-------------------------------------------chh-----HHHhcCccccccceEEcCCCCe
Confidence             544443                                           333     5567899999999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++++.||+|++|+.. ..+++.++...+.                              ..                 +
T Consensus       363 iisaSsDgtvkvW~~K-tteC~~Tfk~~~~------------------------------d~-----------------~  394 (508)
T KOG0275|consen  363 IISASSDGTVKVWHGK-TTECLSTFKPLGT------------------------------DY-----------------P  394 (508)
T ss_pred             EEEecCCccEEEecCc-chhhhhhccCCCC------------------------------cc-----------------c
Confidence            9999999999999998 5555555543221                              11                 3


Q ss_pred             eeEEEEcCC-CCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        415 VWFVNFSPL-DRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       415 i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                      |.++-.-|. -..++++...++|++.++. |+.++.+..   ..+...+++.||.|.++++.++|+.++.+.+.+|++..
T Consensus       395 vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~  473 (508)
T KOG0275|consen  395 VNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLER  473 (508)
T ss_pred             ceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceee
Confidence            444444443 3567788888999999985 567777753   23556778899999999999999999999999999999


Q ss_pred             EecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        491 TFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       491 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+..|...+           -.+   +-+|..++||+-+.||.+++|
T Consensus       474 tl~VhEkdv-----------IGl---~HHPHqNllAsYsEDgllKLW  506 (508)
T KOG0275|consen  474 TLPVHEKDV-----------IGL---THHPHQNLLASYSEDGLLKLW  506 (508)
T ss_pred             eeecccccc-----------ccc---ccCcccchhhhhcccchhhhc
Confidence            999999888           888   999999999999999999999

>KOG0288|consensus

Probab=99.97  E-value=1.1e-29  Score=218.64  Aligned_cols=277  Identities=17%  Similarity=0.227  Sum_probs=230.1

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----c
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----K  214 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l  214 (537)
                      -.....+..|.+.+..+.|- ++...|+.+..+..    |                 ++|+.       ...++.    |
T Consensus       165 S~~~~~ld~h~gev~~v~~l-~~sdtlatgg~Dr~----I-----------------k~W~v-------~~~k~~~~~tL  215 (459)
T KOG0288|consen  165 SRALFVLDAHEGEVHDVEFL-RNSDTLATGGSDRI----I-----------------KLWNV-------LGEKSELISTL  215 (459)
T ss_pred             hhhhhhhhccccccceeEEc-cCcchhhhcchhhh----h-----------------hhhhc-------ccchhhhhhhh
Confidence            34556677899999999998 67678888888877    9                 99999       544432    6


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD  294 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d  294 (537)
                      .     |.  .++|+++   .|.++++++++.+.|+.++  +|+++...                               
T Consensus       216 a-----Gs--~g~it~~---d~d~~~~~~iAas~d~~~r--~Wnvd~~r-------------------------------  252 (459)
T KOG0288|consen  216 A-----GS--LGNITSI---DFDSDNKHVIAASNDKNLR--LWNVDSLR-------------------------------  252 (459)
T ss_pred             h-----cc--CCCccee---eecCCCceEEeecCCCcee--eeeccchh-------------------------------
Confidence            6     77  8899999   9999999999999998888  88887621                               


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-ecCC------CCE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-GHKK------GTQ  367 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~------~~~  367 (537)
                                  .     ..++.+|.+.|+++.|......+++|+.|.+|++||+. ...+.+++- ....      ...
T Consensus       253 ------------~-----~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~-k~~C~kt~l~~S~cnDI~~~~~~  314 (459)
T KOG0288|consen  253 ------------L-----RHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQ-KAYCSKTVLPGSQCNDIVCSISD  314 (459)
T ss_pred             ------------h-----hhhhcccccceeeehhhccccceeeccccchhhhhhhh-hhheeccccccccccceEeccee
Confidence                        1     44567899999999998877779999999999999998 444443332 2222      455


Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL  447 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~  447 (537)
                      ++++..|++|++||.++..+....+.+.                  .|+++..++++..+.+.+.|.++.+.|+++.+..
T Consensus       315 ~~SgH~DkkvRfwD~Rs~~~~~sv~~gg------------------~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~  376 (459)
T KOG0288|consen  315 VISGHFDKKVRFWDIRSADKTRSVPLGG------------------RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIR  376 (459)
T ss_pred             eeecccccceEEEeccCCceeeEeecCc------------------ceeeEeeccCCeEEeeecCCCceeeeecccccEE
Confidence            6788899999999999999888887765                  7888999999999999999999999999998888


Q ss_pred             eEeecC----CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccc--eeccCCCCCCccccccceeeecC
Q psy10942        448 KSLEGH----DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK--IRNSDSENDHKGFGLPRQLCSRN  521 (537)
Q Consensus       448 ~~~~~~----~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~s~~  521 (537)
                      ..+...    ....+.+.|||++.|+++||.||.|+||++.++++...+......  |           +++   +|+|.
T Consensus       377 ~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI-----------~s~---~W~~s  442 (459)
T KOG0288|consen  377 QTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAI-----------TSL---SWNPS  442 (459)
T ss_pred             EEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcce-----------EEE---EEcCC
Confidence            777642    234789999999999999999999999999999999988765544  7           888   99999


Q ss_pred             CCEEEEEeCCCCEEeC
Q psy10942        522 SDCEYRGGWSPQVVVY  537 (537)
Q Consensus       522 ~~~l~s~~~dg~i~vW  537 (537)
                      |..|++++.++.+.+|
T Consensus       443 G~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  443 GSGLLSADKQKAVTLW  458 (459)
T ss_pred             CchhhcccCCcceEec
Confidence            9999999999999999

>KOG0277|consensus

Probab=99.97  E-value=4e-29  Score=201.49  Aligned_cols=278  Identities=19%  Similarity=0.289  Sum_probs=207.5

Q ss_pred             eEEEEEecc-ccEEEEEe-------CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942         99 LVRIVRSSV-KRMYAVVT-------ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus        99 v~~~~~s~~-~~~la~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                      =.++.|||- .++||++.       ..|.+.|.++..+.+        ......+. -.+.+..++|++..++.++++++
T Consensus        11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~g--------i~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~G   81 (311)
T KOG0277|consen   11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKG--------IQECQSYD-TEDGLFDVAWSENHENQVIAASG   81 (311)
T ss_pred             cceeEecccccchhheeehhhcccccCceEEEEecCCCCC--------eEEEEeee-cccceeEeeecCCCcceEEEEec
Confidence            357888883 23444433       267899999864211        22333333 35569999999888889999999


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc--ccccccccCCCcCeEEEEeccCcccCC-Ceeeec
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQ  246 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~  246 (537)
                      ++.    +                 ++||.       .... .+  ++     .|  ..+|.++   .|++.. +.++++
T Consensus        82 DGS----L-----------------rl~d~-------~~~s~Pi~~~k-----EH--~~EV~Sv---dwn~~~r~~~lts  123 (311)
T KOG0277|consen   82 DGS----L-----------------RLFDL-------TMPSKPIHKFK-----EH--KREVYSV---DWNTVRRRIFLTS  123 (311)
T ss_pred             Cce----E-----------------EEecc-------CCCCcchhHHH-----hh--hhheEEe---ccccccceeEEee
Confidence            888    9                 99997       3222 22  66     89  9999999   777633 334444


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +-|++|+  +|                                           +...++.     ..++.+|..-|...
T Consensus       124 SWD~TiK--LW-------------------------------------------~~~r~~S-----v~Tf~gh~~~Iy~a  153 (311)
T KOG0277|consen  124 SWDGTIK--LW-------------------------------------------DPNRPNS-----VQTFNGHNSCIYQA  153 (311)
T ss_pred             ccCCceE--ee-------------------------------------------cCCCCcc-----eEeecCCccEEEEE
Confidence            5555555  55                                           4444433     33467899999999


Q ss_pred             EEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        327 TVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       327 ~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      +|+| ..+++++++.|+.+++||++..++.+. +..|..                                         
T Consensus       154 ~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~-----------------------------------------  191 (311)
T KOG0277|consen  154 AFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNS-----------------------------------------  191 (311)
T ss_pred             ecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccc-----------------------------------------
Confidence            9999 578999999999999999996655555 555543                                         


Q ss_pred             CCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecC-CCEEEEEeCCCcEEEEE
Q psy10942        406 DENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINK-GTQIVSTGADGLLKLWS  482 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~vwd  482 (537)
                              .+.++.|+. +.+.+++|+.|+.|+.||+++ ..++.++.+|.-.|+.++|||. ...||+++.|-++||||
T Consensus       192 --------Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~  263 (311)
T KOG0277|consen  192 --------EILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWD  263 (311)
T ss_pred             --------eeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecc
Confidence                    677777776 457899999999999999987 4678899999999999999994 56899999999999999


Q ss_pred             CCCC-eeEEEecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942        483 IKTS-TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       483 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~i~vW  537 (537)
                      ...+ ..+.+...|..-+           ..+   .||+ +..++|+.+.|+.+.||
T Consensus       264 ~~~~ds~~e~~~~HtEFv-----------~g~---Dws~~~~~~vAs~gWDe~l~Vw  306 (311)
T KOG0277|consen  264 PERQDSAIETVDHHTEFV-----------CGL---DWSLFDPGQVASTGWDELLYVW  306 (311)
T ss_pred             cccchhhhhhhhccceEE-----------ecc---ccccccCceeeecccccceeee
Confidence            9854 4455666777777           677   8876 46799999999999998

>KOG0275|consensus

Probab=99.97  E-value=6e-30  Score=213.47  Aligned_cols=271  Identities=16%  Similarity=0.189  Sum_probs=227.3

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC---------cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS---------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPN  136 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~---------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~  136 (537)
                      +++|+++++.||.|.+||..+|+....++..         ++|.|+.||.|...||+|+.||.|++|.+.+         
T Consensus       224 DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~t---------  294 (508)
T KOG0275|consen  224 DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIET---------  294 (508)
T ss_pred             CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEec---------
Confidence            8899999999999999999999987766543         6999999999999999999999999999999         


Q ss_pred             cccceeEEee-cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--
Q psy10942        137 KILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--  213 (537)
Q Consensus       137 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--  213 (537)
                        +.+++++. .|+..|+++.|+ .|+..+++++.+..    +                 ++.-+       ++++++  
T Consensus       295 --G~ClRrFdrAHtkGvt~l~FS-rD~SqiLS~sfD~t----v-----------------RiHGl-------KSGK~LKE  343 (508)
T KOG0275|consen  295 --GQCLRRFDRAHTKGVTCLSFS-RDNSQILSASFDQT----V-----------------RIHGL-------KSGKCLKE  343 (508)
T ss_pred             --chHHHHhhhhhccCeeEEEEc-cCcchhhcccccce----E-----------------EEecc-------ccchhHHH
Confidence              78888887 899999999999 88888889888887    8                 88888       888888  


Q ss_pred             ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942        214 KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       214 l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  293 (537)
                      ++     ||  ...|...   .|++||.++++++.||+++  +|+..+    ..|     ..++                
T Consensus       344 fr-----GH--sSyvn~a---~ft~dG~~iisaSsDgtvk--vW~~Kt----teC-----~~Tf----------------  386 (508)
T KOG0275|consen  344 FR-----GH--SSYVNEA---TFTDDGHHIISASSDGTVK--VWHGKT----TEC-----LSTF----------------  386 (508)
T ss_pred             hc-----Cc--cccccce---EEcCCCCeEEEecCCccEE--EecCcc----hhh-----hhhc----------------
Confidence            78     99  9999999   9999999999999999999  999887    233     1110                


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEc
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~  372 (537)
                                  +         ..+...+|+.+-.-| +...++++...+++++.++.  ++.++.+.....        
T Consensus       387 ------------k---------~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q--GQvVrsfsSGkR--------  435 (508)
T KOG0275|consen  387 ------------K---------PLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ--GQVVRSFSSGKR--------  435 (508)
T ss_pred             ------------c---------CCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc--ceEEeeeccCCc--------
Confidence                        0         012334567777666 44678888888999999987  455555443221        


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  452 (537)
                       +                    .                 |...+.+.||.|.++.+.+.|+.++.|...+|++-.++..
T Consensus       436 -E--------------------g-----------------GdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V  477 (508)
T KOG0275|consen  436 -E--------------------G-----------------GDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV  477 (508)
T ss_pred             -c--------------------C-----------------CceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeec
Confidence             0                    0                 1445567899999999999999999999999999999999


Q ss_pred             CCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        453 HDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      |...|..++-+|..+.||+-++||.+++|.
T Consensus       478 hEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  478 HEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccccccccccCcccchhhhhcccchhhhcC
Confidence            999999999999999999999999999995

>KOG1446|consensus

Probab=99.97  E-value=6.2e-28  Score=201.46  Aligned_cols=280  Identities=13%  Similarity=0.115  Sum_probs=220.8

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      .+.|.++.|+++|.+|++++.|.++++||...           +..++++..+.-.+..++|. .....++.++...+  
T Consensus        14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~-----------g~~~~ti~skkyG~~~~~Ft-h~~~~~i~sStk~d--   79 (311)
T KOG1446|consen   14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLS-----------GKQVKTINSKKYGVDLACFT-HHSNTVIHSSTKED--   79 (311)
T ss_pred             CCceeEEEecCCCCEEEEecCCCeEEEEEcCC-----------CceeeEeecccccccEEEEe-cCCceEEEccCCCC--
Confidence            36899999999999999999999999999999           78888888877778889998 44555555555333  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                      -+|                 +.-++       .+.+.+  +.     ||  ...|.++   +.+|-++.+++++.|++|+
T Consensus        80 ~tI-----------------ryLsl-------~dNkylRYF~-----GH--~~~V~sL---~~sP~~d~FlS~S~D~tvr  125 (311)
T KOG1446|consen   80 DTI-----------------RYLSL-------HDNKYLRYFP-----GH--KKRVNSL---SVSPKDDTFLSSSLDKTVR  125 (311)
T ss_pred             Cce-----------------EEEEe-------ecCceEEEcC-----CC--CceEEEE---EecCCCCeEEecccCCeEE
Confidence            347                 77777       777766  77     99  9999999   9999999999999999999


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +||++..    .|                            .-+.+                  ...-..++|+|+|-
T Consensus       126 --LWDlR~~----~c----------------------------qg~l~------------------~~~~pi~AfDp~GL  153 (311)
T KOG1446|consen  126 --LWDLRVK----KC----------------------------QGLLN------------------LSGRPIAAFDPEGL  153 (311)
T ss_pred             --eeEecCC----CC----------------------------ceEEe------------------cCCCcceeECCCCc
Confidence              9988862    11                            00001                  11123578999999


Q ss_pred             EEEEEeCCCcEEEEEccCC-ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        334 LLASGSLDKTVKVWSTTGG-LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      ++|++.....|++||++.- ..+...+....                             ....                
T Consensus       154 ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~-----------------------------~~~~----------------  188 (311)
T KOG1446|consen  154 IFALANGSELIKLYDLRSFDKGPFTTFSITD-----------------------------NDEA----------------  188 (311)
T ss_pred             EEEEecCCCeEEEEEecccCCCCceeEccCC-----------------------------CCcc----------------
Confidence            9999988889999999842 22222222110                             0000                


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcce---EEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV---LRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                       ..+.+.|||||++|+.+...+.+++.|.-+|..+.++..+...-   .+.+|+||++++++|+.||+|.+|++++|+.+
T Consensus       189 -ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v  267 (311)
T KOG1446|consen  189 -EWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKV  267 (311)
T ss_pred             -ceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence             67889999999999999999999999999999999998876543   57889999999999999999999999999999


Q ss_pred             EEecC-CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        490 STFDK-HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       490 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..+++ +..++           .++   .|+|.--.+++++  ..+.+|
T Consensus       268 ~~~~~~~~~~~-----------~~~---~fnP~~~mf~sa~--s~l~fw  300 (311)
T KOG1446|consen  268 AVLRGPNGGPV-----------SCV---RFNPRYAMFVSAS--SNLVFW  300 (311)
T ss_pred             eEecCCCCCCc-----------ccc---ccCCceeeeeecC--ceEEEE
Confidence            99998 56777           777   8999887777754  455555

>KOG0278|consensus

Probab=99.97  E-value=2.4e-29  Score=202.21  Aligned_cols=287  Identities=14%  Similarity=0.181  Sum_probs=225.8

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +..|+..++  ++|-     ..++-+|++++.|+.--+-+-++|.-+.++.+| +.|.+..+..+....|+++.|-+-++
T Consensus        13 htrpvvdl~--~s~i-----tp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakv   85 (334)
T KOG0278|consen   13 HTRPVVDLA--FSPI-----TPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKV   85 (334)
T ss_pred             CCcceeEEe--ccCC-----CCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhh
Confidence            455666664  4442     237889999999999888888899999999987 69999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||.-+           +..+..+. |...|.+++|+ .|.++|++++...-    +                 |++|+  
T Consensus        86 w~a~t-----------gdelhsf~-hkhivk~~af~-~ds~~lltgg~ekl----l-----------------rvfdl--  129 (334)
T KOG0278|consen   86 WDAVT-----------GDELHSFE-HKHIVKAVAFS-QDSNYLLTGGQEKL----L-----------------RVFDL--  129 (334)
T ss_pred             hhhhh-----------hhhhhhhh-hhheeeeEEec-ccchhhhccchHHH----h-----------------hhhhc--
Confidence            99999           56666666 78889999999 88899998888887    8                 99999  


Q ss_pred             HhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC
Q psy10942        203 EAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG  282 (537)
Q Consensus       203 ~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~  282 (537)
                           +..+..  .+++.+|  .+.|..+   .|....+.+++.+.|+++|  +||..+                     
T Consensus       130 -----n~p~Ap--p~E~~gh--tg~Ir~v---~wc~eD~~iLSSadd~tVR--LWD~rT---------------------  174 (334)
T KOG0278|consen  130 -----NRPKAP--PKEISGH--TGGIRTV---LWCHEDKCILSSADDKTVR--LWDHRT---------------------  174 (334)
T ss_pred             -----cCCCCC--chhhcCC--CCcceeE---EEeccCceEEeeccCCceE--EEEecc---------------------
Confidence                 655554  1233399  9999998   6655555555555555555  555544                     


Q ss_pred             CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942        283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH  362 (537)
Q Consensus       283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  362 (537)
                                            +.....+      ....+|+++.++++|++|.++. .+.|.+||.. ...+++.....
T Consensus       175 ----------------------gt~v~sL------~~~s~VtSlEvs~dG~ilTia~-gssV~Fwdak-sf~~lKs~k~P  224 (334)
T KOG0278|consen  175 ----------------------GTEVQSL------EFNSPVTSLEVSQDGRILTIAY-GSSVKFWDAK-SFGLLKSYKMP  224 (334)
T ss_pred             ----------------------CcEEEEE------ecCCCCcceeeccCCCEEEEec-CceeEEeccc-cccceeeccCc
Confidence                                  4432222      2345789999999998777654 4678889887 44444433321


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                                                      .                  .|.+..++|+...+++|++|..++.||..
T Consensus       225 --------------------------------~------------------nV~SASL~P~k~~fVaGged~~~~kfDy~  254 (334)
T KOG0278|consen  225 --------------------------------C------------------NVESASLHPKKEFFVAGGEDFKVYKFDYN  254 (334)
T ss_pred             --------------------------------c------------------ccccccccCCCceEEecCcceEEEEEecc
Confidence                                            1                  67788899999999999999999999999


Q ss_pred             CceeeeEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        443 DYVCLKSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       443 ~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      +++.+..+ ++|.++|.++.|+|+|...++|++||+|++|....++.
T Consensus       255 TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  255 TGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             CCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            99999886 89999999999999999999999999999999866543

>KOG0772|consensus

Probab=99.96  E-value=6.4e-29  Score=219.78  Aligned_cols=296  Identities=16%  Similarity=0.203  Sum_probs=215.3

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..|.++++.|.|-.|++|+.|.+|++||+..-..    .....+.+....  ...|.++.|+ +.+..|++.++...   
T Consensus       168 k~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMda----s~~~fr~l~P~E--~h~i~sl~ys-~Tg~~iLvvsg~aq---  237 (641)
T KOG0772|consen  168 KIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDA----SMRSFRQLQPCE--THQINSLQYS-VTGDQILVVSGSAQ---  237 (641)
T ss_pred             eEEEEeeecCCCceeeeccccceEEEEecccccc----cchhhhccCccc--ccccceeeec-CCCCeEEEEecCcc---
Confidence            4899999999999999999999999999987311    111122222222  3458999999 67777777777665   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc---------ccccccccCCCcCeEEEEeccCcccCC-Ceeeec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---------KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQ  246 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---------l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~  246 (537)
                       .                 +|+|.       ...+..         .....-.||  ...++|.   +|+|+. +.++++
T Consensus       238 -a-----------------kl~DR-------dG~~~~e~~KGDQYI~Dm~nTKGH--ia~lt~g---~whP~~k~~FlT~  287 (641)
T KOG0772|consen  238 -A-----------------KLLDR-------DGFEIVEFSKGDQYIRDMYNTKGH--IAELTCG---CWHPDNKEEFLTC  287 (641)
T ss_pred             -e-----------------eEEcc-------CCceeeeeeccchhhhhhhccCCc--eeeeecc---ccccCcccceEEe
Confidence             5                 55554       221111         111122389  8999999   999976 578889


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.||++|  +|++.....                               ...++.....           .+..-+++.+
T Consensus       288 s~DgtlR--iWdv~~~k~-------------------------------q~qVik~k~~-----------~g~Rv~~tsC  323 (641)
T KOG0772|consen  288 SYDGTLR--IWDVNNTKS-------------------------------QLQVIKTKPA-----------GGKRVPVTSC  323 (641)
T ss_pred             cCCCcEE--EEecCCchh-------------------------------heeEEeeccC-----------CCcccCceee
Confidence            9999999  999887321                               1222222111           1334568899


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCc--eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGL--KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +|+|||+++|+|+.||.|.+|+.....  .....-..|..+.                                      
T Consensus       324 ~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~--------------------------------------  365 (641)
T KOG0772|consen  324 AWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQ--------------------------------------  365 (641)
T ss_pred             ecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCC--------------------------------------
Confidence            999999999999999999999986211  1111222222210                                      


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCC--cceEEEEEecCCCEEEEEeC------C
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHD--ASVLRCHFINKGTQIVSTGA------D  475 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~------d  475 (537)
                               .|++++||+||++|++-+.|+++++||++. .+++....+-.  .+-+.++|||+.++|++|..      .
T Consensus       366 ---------~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~  436 (641)
T KOG0772|consen  366 ---------DITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTA  436 (641)
T ss_pred             ---------ceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCC
Confidence                     799999999999999999999999999987 44555555432  34678999999999999864      4


Q ss_pred             CcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        476 GLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |.+.+||..+-+.+..+.-....|           ..+   .|+|.-+.|+.++.||.++||
T Consensus       437 g~L~f~d~~t~d~v~ki~i~~aSv-----------v~~---~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  437 GTLFFFDRMTLDTVYKIDISTASV-----------VRC---LWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             ceEEEEeccceeeEEEecCCCceE-----------EEE---eecchhhheeeecCCCceEEE
Confidence            789999999999998887777677           677   999999999999999999885

>KOG0640|consensus

Probab=99.96  E-value=4.5e-29  Score=206.95  Aligned_cols=295  Identities=16%  Similarity=0.192  Sum_probs=229.4

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccc------cCcc-cccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSE------TGLE-ERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~------~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      +++.+.+|||||.++|+|+.|-.|+|.|++.-      +... ..+.....+++++-.|.+.|+++.|+ |.+..|++++
T Consensus       113 ~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH-Pre~ILiS~s  191 (430)
T KOG0640|consen  113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH-PRETILISGS  191 (430)
T ss_pred             cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec-chhheEEecc
Confidence            68999999999999999999999999999721      1111 11222246788999999999999999 7778888888


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                      .++.    |                 +++|.       ......  ++   ....  ..+|.++   .|+|.|.+|+.|.
T Consensus       192 rD~t----v-----------------KlFDf-------sK~saKrA~K---~~qd--~~~vrsi---SfHPsGefllvgT  235 (430)
T KOG0640|consen  192 RDNT----V-----------------KLFDF-------SKTSAKRAFK---VFQD--TEPVRSI---SFHPSGEFLLVGT  235 (430)
T ss_pred             CCCe----E-----------------EEEec-------ccHHHHHHHH---Hhhc--cceeeeE---eecCCCceEEEec
Confidence            7777    9                 99998       322222  22   0023  6789999   9999999999999


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      ...+++  ++|+.+.    .|                   ++++                      .....|.+.|+++.
T Consensus       236 dHp~~r--lYdv~T~----Qc-------------------fvsa----------------------nPd~qht~ai~~V~  268 (430)
T KOG0640|consen  236 DHPTLR--LYDVNTY----QC-------------------FVSA----------------------NPDDQHTGAITQVR  268 (430)
T ss_pred             CCCcee--EEeccce----eE-------------------eeec----------------------CcccccccceeEEE
Confidence            888888  8888772    11                   2211                      12346899999999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      +++.+++.++++.||.|++||=- ..++++++..-.+                               +           
T Consensus       269 Ys~t~~lYvTaSkDG~IklwDGV-S~rCv~t~~~AH~-------------------------------g-----------  305 (430)
T KOG0640|consen  269 YSSTGSLYVTASKDGAIKLWDGV-SNRCVRTIGNAHG-------------------------------G-----------  305 (430)
T ss_pred             ecCCccEEEEeccCCcEEeeccc-cHHHHHHHHhhcC-------------------------------C-----------
Confidence            99999999999999999999976 4555555432211                               1           


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEEecCCCEEEEEeC-CCcEEEE
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHFINKGTQIVSTGA-DGLLKLW  481 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~s~~~-dg~v~vw  481 (537)
                           ..|.+..|..+++|+++.+.|..+++|.+.++.++.++.+-.     ..-+...|+....+++.-.+ .+.+.-|
T Consensus       306 -----sevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsW  380 (430)
T KOG0640|consen  306 -----SEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSW  380 (430)
T ss_pred             -----ceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeec
Confidence                 078889999999999999999999999999999999987641     12345667777777776554 5789999


Q ss_pred             ECCCCeeEEEec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        482 SIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       482 d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |.+++..+..+. +|.+.+           ..+   .-||.+.-+.++++|-.+|+|
T Consensus       381 daRtadr~~l~slgHn~a~-----------R~i---~HSP~~p~FmTcsdD~raRFW  423 (430)
T KOG0640|consen  381 DARTADRVALLSLGHNGAV-----------RWI---VHSPVEPAFMTCSDDFRARFW  423 (430)
T ss_pred             cccchhhhhhcccCCCCCc-----------eEE---EeCCCCCceeeecccceeeee
Confidence            999988776554 899999           888   899999999999999999999

>KOG1445|consensus

Probab=99.96  E-value=2.2e-28  Score=221.74  Aligned_cols=154  Identities=12%  Similarity=0.111  Sum_probs=110.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeee-ec------cccccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRS-YP------AYESLETCAVFHLSDETESKSGGKTFVLAGGE   75 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (537)
                      .-|+.+.|+|. +..+|+|++.|..|+||.+..|..... -+      ..-.++++  .+.|.       ...+++++. 
T Consensus        80 d~VtDl~FspF-~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l--~fHpT-------aDgil~s~a-  148 (1012)
T KOG1445|consen   80 DQVTDLGFSPF-ADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECL--RFHPT-------ADGILASGA-  148 (1012)
T ss_pred             ceeeccCcccc-chhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEe--ecccC-------cCceEEecc-
Confidence            45899999985 446899999999999999985432221 11      12233445  34664       334455444 


Q ss_pred             cceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh-hh
Q psy10942         76 KSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE-IL  153 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~  153 (537)
                      .|.+++||+.+++.+..+..| +.|.++.|+.||++|++++.|..|+|||....          ++.++..++|.+. -.
T Consensus       149 ~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~----------~~piQ~te~H~~~rds  218 (1012)
T KOG1445|consen  149 HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRAS----------MEPIQTTEGHGGMRDS  218 (1012)
T ss_pred             CceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccC----------CCccccccccccchhh
Confidence            789999999999999998876 69999999999999999999999999999875          6778888888763 24


Q ss_pred             hhhcccCCCccEEEeeeccccCCcc
Q psy10942        154 DIALLGEEDSHIVVASNEYLNGGDL  178 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~i  178 (537)
                      .+.|. -+-.+|++..-+......+
T Consensus       219 Rv~w~-Gn~~rlisTGF~~~R~reV  242 (1012)
T KOG1445|consen  219 RVLWA-GNWERLISTGFTTKRIREV  242 (1012)
T ss_pred             eeeec-cchhhhhhcccchhhheee
Confidence            46676 3333554443333333446

>KOG0288|consensus

Probab=99.96  E-value=5.2e-29  Score=214.41  Aligned_cols=282  Identities=17%  Similarity=0.187  Sum_probs=228.2

Q ss_pred             hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         90 LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      ...+..| +.+..+.|-++...|++++.|..|++|+...++         .+...++.|..+.++++.|. +++.+++++
T Consensus       168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k---------~~~~~tLaGs~g~it~~d~d-~~~~~~iAa  237 (459)
T KOG0288|consen  168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK---------SELISTLAGSLGNITSIDFD-SDNKHVIAA  237 (459)
T ss_pred             hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch---------hhhhhhhhccCCCcceeeec-CCCceEEee
Confidence            3344433 689999999999999999999999999998731         34778888888999999999 677778888


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      +.++.    +                 ++|++       ...+..  |.     ||  .+.|+++   .|......+++|
T Consensus       238 s~d~~----~-----------------r~Wnv-------d~~r~~~TLs-----GH--tdkVt~a---k~~~~~~~vVsg  279 (459)
T KOG0288|consen  238 SNDKN----L-----------------RLWNV-------DSLRLRHTLS-----GH--TDKVTAA---KFKLSHSRVVSG  279 (459)
T ss_pred             cCCCc----e-----------------eeeec-------cchhhhhhhc-----cc--ccceeee---hhhccccceeec
Confidence            88887    9                 99999       777766  88     99  9999999   998888779999


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeee-eCCc----ceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY-TGGT----VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~----v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      +.|.+++  +||+..    ..|     ..++..- ....    ...+++|-.|++|++||.++......     ...+ +
T Consensus       280 s~DRtiK--~WDl~k----~~C-----~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~s-----v~~g-g  342 (459)
T KOG0288|consen  280 SADRTIK--LWDLQK----AYC-----SKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRS-----VPLG-G  342 (459)
T ss_pred             cccchhh--hhhhhh----hhe-----eccccccccccceEecceeeeecccccceEEEeccCCceeeE-----eecC-c
Confidence            9999999  999998    444     2222211 1122    25788999999999999998876432     2333 4


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      .|+++..++++..+.+.+.|.++.+.|++ +......+....-                                     
T Consensus       343 ~vtSl~ls~~g~~lLsssRDdtl~viDlR-t~eI~~~~sA~g~-------------------------------------  384 (459)
T KOG0288|consen  343 RVTSLDLSMDGLELLSSSRDDTLKVIDLR-TKEIRQTFSAEGF-------------------------------------  384 (459)
T ss_pred             ceeeEeeccCCeEEeeecCCCceeeeecc-cccEEEEeecccc-------------------------------------
Confidence            89999999999999999999999999999 5555554443211                                     


Q ss_pred             EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc--ceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA--SVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                             ... ...+.+.|||++.|+++|+.||.|+||++.++++...+.....  .|+++.|+|.|..|++++.++.+.
T Consensus       385 -------k~a-sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~  456 (459)
T KOG0288|consen  385 -------KCA-SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVT  456 (459)
T ss_pred             -------ccc-cccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceE
Confidence                   000 0467789999999999999999999999999999888876544  499999999999999999999999


Q ss_pred             EEE
Q psy10942        480 LWS  482 (537)
Q Consensus       480 vwd  482 (537)
                      +|.
T Consensus       457 lW~  459 (459)
T KOG0288|consen  457 LWT  459 (459)
T ss_pred             ecC
Confidence            993

>KOG0305|consensus

Probab=99.96  E-value=1.9e-28  Score=224.38  Aligned_cols=268  Identities=17%  Similarity=0.219  Sum_probs=212.6

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCC-CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGL-SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      ..+++|- ...|++|+..+++....... .+.|+++.|+++|++||+|..+|.|.|||...           .+.++.+.
T Consensus       189 n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-----------~k~~~~~~  256 (484)
T KOG0305|consen  189 NVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-----------QKKTRTLR  256 (484)
T ss_pred             CeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhh-----------cccccccc
Confidence            3566555 45699999999885444443 57999999999999999999999999999998           67788888


Q ss_pred             c-chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCc
Q psy10942        147 G-FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDEL  225 (537)
Q Consensus       147 ~-~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~  225 (537)
                      + |...|-+++|.   +..+.+++.++.    |                 ..+|+       +..+....  ...+|  .
T Consensus       257 ~~h~~rvg~laW~---~~~lssGsr~~~----I-----------------~~~dv-------R~~~~~~~--~~~~H--~  301 (484)
T KOG0305|consen  257 GSHASRVGSLAWN---SSVLSSGSRDGK----I-----------------LNHDV-------RISQHVVS--TLQGH--R  301 (484)
T ss_pred             CCcCceeEEEecc---CceEEEecCCCc----E-----------------EEEEE-------ecchhhhh--hhhcc--c
Confidence            8 99999999998   555666666665    8                 77777       55444411  13399  9


Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                      ..|..+   .|++|+.++|+|+.|+.+.  +||....                                           
T Consensus       302 qeVCgL---kws~d~~~lASGgnDN~~~--Iwd~~~~-------------------------------------------  333 (484)
T KOG0305|consen  302 QEVCGL---KWSPDGNQLASGGNDNVVF--IWDGLSP-------------------------------------------  333 (484)
T ss_pred             ceeeee---EECCCCCeeccCCCccceE--eccCCCc-------------------------------------------
Confidence            999999   9999999999999999999  8887441                                           


Q ss_pred             ceeeeeecccccccCCCeEEEEEcC-CCCEEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                      ..     ...+..|.+.|.+++|+| ...+||+|+  .|++|++||.. .+..+.                         
T Consensus       334 ~p-----~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~-~g~~i~-------------------------  382 (484)
T KOG0305|consen  334 EP-----KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN-TGARID-------------------------  382 (484)
T ss_pred             cc-----cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC-CCcEec-------------------------
Confidence            11     334567899999999999 566888864  46777777766 333333                         


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE--eCCCcEEEEECCCceeeeEeecCCcceEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS--SGDATIKLWCLTDYVCLKSLEGHDASVLRC  460 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~  460 (537)
                             ......                  .|.++.|++..+.|+++  ..++.|.||+..+.+++..+.+|...|..+
T Consensus       383 -------~vdtgs------------------QVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~l  437 (484)
T KOG0305|consen  383 -------SVDTGS------------------QVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYL  437 (484)
T ss_pred             -------ccccCC------------------ceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEE
Confidence                   332222                  78888899888766664  356789999999999999999999999999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      +++|||..+++|+.|.++++|++-..
T Consensus       438 a~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  438 ALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EECCCCCEEEEecccCcEEeccccCC
Confidence            99999999999999999999998664

>KOG0283|consensus

Probab=99.96  E-value=1e-27  Score=225.44  Aligned_cols=241  Identities=16%  Similarity=0.194  Sum_probs=187.5

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCC------cc-----------------------------
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYH------FP-----------------------------  265 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~------~~-----------------------------  265 (537)
                      .|  .+.|.++   .||+||+|||+|+.|+.|+  ||.+....      ..                             
T Consensus       265 ah--~gaIw~m---KFS~DGKyLAsaGeD~vir--VWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  265 AH--KGAIWAM---KFSHDGKYLASAGEDGVIR--VWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             cc--CCcEEEE---EeCCCCceeeecCCCceEE--EEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            89  9999999   9999999999999999999  99987610      00                             


Q ss_pred             ----------------cccccccccceeeeeeCC--cc-----eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCC
Q psy10942        266 ----------------LFGIFVPEAEHGAFYTGG--TV-----ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKD  322 (537)
Q Consensus       266 ----------------~~~~~~~~~~~~~~~~~~--~v-----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~  322 (537)
                                      .......|...+.+|.+.  .+     ++|++++.|.+|++|++....++..      -.|...
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~------F~Hndf  411 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKV------FSHNDF  411 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeE------EecCCe
Confidence                            000111334455555551  11     8999999999999999998876543      379999


Q ss_pred             eEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        323 INCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       323 v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      |+|++|+| |.++|++|+-|+.++||++. ..+.+.-.                     |++           .      
T Consensus       412 VTcVaFnPvDDryFiSGSLD~KvRiWsI~-d~~Vv~W~---------------------Dl~-----------~------  452 (712)
T KOG0283|consen  412 VTCVAFNPVDDRYFISGSLDGKVRLWSIS-DKKVVDWN---------------------DLR-----------D------  452 (712)
T ss_pred             eEEEEecccCCCcEeecccccceEEeecC-cCeeEeeh---------------------hhh-----------h------
Confidence            99999999 78999999999999999998 33222211                     111           0      


Q ss_pred             EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec--C------CcceEEEEEecC-CCEEEEE
Q psy10942        402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG--H------DASVLRCHFINK-GTQIVST  472 (537)
Q Consensus       402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~------~~~v~~~~~s~~-~~~l~s~  472 (537)
                                  -|++++|.|||++.++|+.+|.+++|++...+......-  |      ...|+.+.|.|. ...+++.
T Consensus       453 ------------lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVT  520 (712)
T KOG0283|consen  453 ------------LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVT  520 (712)
T ss_pred             ------------hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEe
Confidence                        789999999999999999999999999988776654431  1      227999999984 3457777


Q ss_pred             eCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +.|..|||+|.++.+++..|+++...-.+         ..-   .|+.||++|+++++|..|.||
T Consensus       521 SnDSrIRI~d~~~~~lv~KfKG~~n~~SQ---------~~A---sfs~Dgk~IVs~seDs~VYiW  573 (712)
T KOG0283|consen  521 SNDSRIRIYDGRDKDLVHKFKGFRNTSSQ---------ISA---SFSSDGKHIVSASEDSWVYIW  573 (712)
T ss_pred             cCCCceEEEeccchhhhhhhcccccCCcc---------eee---eEccCCCEEEEeecCceEEEE
Confidence            89999999999999999999876543200         223   899999999999999999999

>KOG0283|consensus

Probab=99.96  E-value=6.7e-28  Score=226.63  Aligned_cols=256  Identities=18%  Similarity=0.228  Sum_probs=199.1

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEeccccc----------------------------C--c--------------
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSET----------------------------G--L--------------  131 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~----------------------------~--~--------------  131 (537)
                      .+.|.+|.||+||+|||+|+.|+.|+||.+...+                            .  .              
T Consensus       267 ~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~  346 (712)
T KOG0283|consen  267 KGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSP  346 (712)
T ss_pred             CCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCc
Confidence            3799999999999999999999999999887600                            0  0              


Q ss_pred             -----ccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhh
Q psy10942        132 -----EERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKF  206 (537)
Q Consensus       132 -----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~  206 (537)
                           ...+....+++..+.||.+.|..+.|+.  .++|++++.|+.    +                 +||++      
T Consensus       347 ~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKT----V-----------------RLWh~------  397 (712)
T KOG0283|consen  347 CVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKT----V-----------------RLWHP------  397 (712)
T ss_pred             cccCCCccccccccchhhhhccchhheeccccc--CCeeEecccccc----E-----------------EeecC------
Confidence                 0011112334556779999999999983  678889999888    9                 99999      


Q ss_pred             ccccccc-ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCc
Q psy10942        207 KQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGT  284 (537)
Q Consensus       207 ~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (537)
                       ....|+ .-     .|  .+.|+|+   +|+| |.+||++|+-|+.+|  ||++..                       
T Consensus       398 -~~~~CL~~F-----~H--ndfVTcV---aFnPvDDryFiSGSLD~KvR--iWsI~d-----------------------  441 (712)
T KOG0283|consen  398 -GRKECLKVF-----SH--NDFVTCV---AFNPVDDRYFISGSLDGKVR--LWSISD-----------------------  441 (712)
T ss_pred             -CCcceeeEE-----ec--CCeeEEE---EecccCCCcEeecccccceE--EeecCc-----------------------
Confidence             888898 66     79  9999999   9999 678999999999999  999987                       


Q ss_pred             ceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC
Q psy10942        285 VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  364 (537)
Q Consensus       285 v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  364 (537)
                                ..|..|.--                ..-|++++|.|||+..++|+.+|..++|+.. +.++......+..
T Consensus       442 ----------~~Vv~W~Dl----------------~~lITAvcy~PdGk~avIGt~~G~C~fY~t~-~lk~~~~~~I~~~  494 (712)
T KOG0283|consen  442 ----------KKVVDWNDL----------------RDLITAVCYSPDGKGAVIGTFNGYCRFYDTE-GLKLVSDFHIRLH  494 (712)
T ss_pred             ----------CeeEeehhh----------------hhhheeEEeccCCceEEEEEeccEEEEEEcc-CCeEEEeeeEeec
Confidence                      234444311                1348999999999999999999999999999 6666665544322


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCC
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTD  443 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~  443 (537)
                      +                   ++   .. .+.                  .|+.+.|.|.. ..+++.+.|..|+|||.++
T Consensus       495 ~-------------------~K---k~-~~~------------------rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~  533 (712)
T KOG0283|consen  495 N-------------------KK---KK-QGK------------------RITGLQFFPGDPDEVLVTSNDSRIRIYDGRD  533 (712)
T ss_pred             c-------------------Cc---cc-cCc------------------eeeeeEecCCCCCeEEEecCCCceEEEeccc
Confidence            1                   11   00 011                  56777777643 3567778999999999988


Q ss_pred             ceeeeEeecCCcc--eEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        444 YVCLKSLEGHDAS--VLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       444 ~~~~~~~~~~~~~--v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ..++..|+++...  -....|+.||++|+++++|..|++|+..
T Consensus       534 ~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~  576 (712)
T KOG0283|consen  534 KDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND  576 (712)
T ss_pred             hhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence            8899999876443  3567899999999999999999999973

>KOG0310|consensus

Probab=99.96  E-value=6.3e-28  Score=212.40  Aligned_cols=294  Identities=16%  Similarity=0.191  Sum_probs=233.2

Q ss_pred             EEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC-CCcceEEEEEec
Q psy10942         28 LFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG-LSSPLVRIVRSS  106 (537)
Q Consensus        28 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~  106 (537)
                      .+-|+-.+.-++  .+...++..+  .++|.       ...-+++++ .-.+.+|+..+...+..+. ..+.+.++.|-.
T Consensus        11 ~~~w~~~~~~~~--~ke~~~vssl--~fsp~-------~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~   78 (487)
T KOG0310|consen   11 IRYWRQETFPPV--HKEHNSVSSL--CFSPK-------HPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRS   78 (487)
T ss_pred             chhhhhhccccc--ccccCcceeE--ecCCC-------CCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeec
Confidence            455654433332  2244677777  55774       333355555 3459999998877766554 346899999999


Q ss_pred             cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeeccc
Q psy10942        107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGA  186 (537)
Q Consensus       107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~  186 (537)
                      ||++||+|...|.|+|+|+.+           ...++.+..|+.++..+.|+|.++..+++++.+..    +        
T Consensus        79 DG~LlaaGD~sG~V~vfD~k~-----------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v----~--------  135 (487)
T KOG0310|consen   79 DGRLLAAGDESGHVKVFDMKS-----------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKV----V--------  135 (487)
T ss_pred             CCeEEEccCCcCcEEEecccc-----------HHHHHHHhhccCceeEEEecccCCeEEEecCCCce----E--------
Confidence            999999999999999999777           67889999999999999999777777777777666    8        


Q ss_pred             CCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCC
Q psy10942        187 NRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYH  263 (537)
Q Consensus       187 ~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~  263 (537)
                               ++||+       .+...+  +.     +|  ++.|.|.   +++|.. ..+++|++||.|+  +||++...
T Consensus       136 ---------k~~d~-------s~a~v~~~l~-----~h--tDYVR~g---~~~~~~~hivvtGsYDg~vr--l~DtR~~~  187 (487)
T KOG0310|consen  136 ---------KYWDL-------STAYVQAELS-----GH--TDYVRCG---DISPANDHIVVTGSYDGKVR--LWDTRSLT  187 (487)
T ss_pred             ---------EEEEc-------CCcEEEEEec-----CC--cceeEee---ccccCCCeEEEecCCCceEE--EEEeccCC
Confidence                     99999       665544  66     99  9999999   999865 4778888888888  88877621


Q ss_pred             cccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc
Q psy10942        264 FPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT  343 (537)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~  343 (537)
                                                       -++.               .-.|..+|..+.+-|.|..+++++. ..
T Consensus       188 ---------------------------------~~v~---------------elnhg~pVe~vl~lpsgs~iasAgG-n~  218 (487)
T KOG0310|consen  188 ---------------------------------SRVV---------------ELNHGCPVESVLALPSGSLIASAGG-NS  218 (487)
T ss_pred             ---------------------------------ceeE---------------EecCCCceeeEEEcCCCCEEEEcCC-Ce
Confidence                                             0111               1257788999999999999999875 67


Q ss_pred             EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942        344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL  423 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~  423 (537)
                      +++||+..+++.+..+..|..                                                 .|+|+++..+
T Consensus       219 vkVWDl~~G~qll~~~~~H~K-------------------------------------------------tVTcL~l~s~  249 (487)
T KOG0310|consen  219 VKVWDLTTGGQLLTSMFNHNK-------------------------------------------------TVTCLRLASD  249 (487)
T ss_pred             EEEEEecCCceehhhhhcccc-------------------------------------------------eEEEEEeecC
Confidence            999999866666666555554                                                 8999999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      +..|++|+-|+.+++||+.+.+.+..+. ..++|.+++.+|++..++.|..||.+.+-+.
T Consensus       250 ~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  250 STRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             CceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehh
Confidence            9999999999999999999999999988 6789999999999999999999998877643

>KOG1036|consensus

Probab=99.96  E-value=7e-27  Score=194.18  Aligned_cols=262  Identities=18%  Similarity=0.185  Sum_probs=211.1

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ...|.++   .|+|.+..|+.++.||.++  +++..............|+....++..   ..+++|+.||.|+.+|+.+
T Consensus        13 ~d~IS~v---~f~~~~~~LLvssWDgslr--lYdv~~~~l~~~~~~~~plL~c~F~d~---~~~~~G~~dg~vr~~Dln~   84 (323)
T KOG1036|consen   13 EDGISSV---KFSPSSSDLLVSSWDGSLR--LYDVPANSLKLKFKHGAPLLDCAFADE---STIVTGGLDGQVRRYDLNT   84 (323)
T ss_pred             hhceeeE---EEcCcCCcEEEEeccCcEE--EEeccchhhhhheecCCceeeeeccCC---ceEEEeccCceEEEEEecC
Confidence            6789999   9999999999999999999  999988654444444444444444443   5789999999999999999


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee-------EEEEecCCCCEEEEEcCCCcE
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL-------NVLRGHKKGTQIVSTGADGLL  377 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~~~~~l~~~~~d~~i  377 (537)
                      +.      ...+..|..+|+||.+++....+++|+.|++|++||.+. ....       +.......++.|++|+.+..+
T Consensus        85 ~~------~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~-~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v  157 (323)
T KOG1036|consen   85 GN------EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN-KVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKV  157 (323)
T ss_pred             Cc------ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccc-cccccccccCceEEEEeccCCEEEEeecCceE
Confidence            87      445678999999999999889999999999999999982 2221       334444568999999999999


Q ss_pred             EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc----eeeeEeecC
Q psy10942        378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY----VCLKSLEGH  453 (537)
Q Consensus       378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~  453 (537)
                      .+||+++...........-..               .+.++++-|++.-.++++-||.|.+=.+...    +....|+.|
T Consensus       158 ~iyDLRn~~~~~q~reS~lky---------------qtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCH  222 (323)
T KOG1036|consen  158 LIYDLRNLDEPFQRRESSLKY---------------QTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCH  222 (323)
T ss_pred             EEEEcccccchhhhcccccee---------------EEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEee
Confidence            999999876554332221111               6788999998888999999999988666554    445667777


Q ss_pred             Cc---------ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942        454 DA---------SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       454 ~~---------~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      ..         +|++|+|+|-...||||+.||.|.+||+.+.+.+..+......|           .++   +|+.||..
T Consensus       223 r~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI-----------~sl---sfs~dG~~  288 (323)
T KOG1036|consen  223 RLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSI-----------SSL---SFSMDGSL  288 (323)
T ss_pred             ecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCce-----------EEE---EeccCCCe
Confidence            43         69999999998899999999999999999999999998887778           888   99999999


Q ss_pred             EEEEeC
Q psy10942        525 EYRGGW  530 (537)
Q Consensus       525 l~s~~~  530 (537)
                      ||.++.
T Consensus       289 LAia~s  294 (323)
T KOG1036|consen  289 LAIASS  294 (323)
T ss_pred             EEEEec
Confidence            999864

>KOG0305|consensus

Probab=99.96  E-value=1.7e-27  Score=218.13  Aligned_cols=245  Identities=18%  Similarity=0.225  Sum_probs=205.0

Q ss_pred             HHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc
Q psy10942        196 KTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE  273 (537)
Q Consensus       196 ~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~  273 (537)
                      .+|+.       .++...  ..     .+  ...|+++   .|+++|.+|++|..+|.+.  +||......         
T Consensus       200 ylW~~-------~s~~v~~l~~-----~~--~~~vtSv---~ws~~G~~LavG~~~g~v~--iwD~~~~k~---------  251 (484)
T KOG0305|consen  200 YLWSA-------SSGSVTELCS-----FG--EELVTSV---KWSPDGSHLAVGTSDGTVQ--IWDVKEQKK---------  251 (484)
T ss_pred             EEEec-------CCCceEEeEe-----cC--CCceEEE---EECCCCCEEEEeecCCeEE--EEehhhccc---------
Confidence            99999       777755  33     34  6889999   9999999999999999999  999887432         


Q ss_pred             cceeee-eeC--Ccc----eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        274 AEHGAF-YTG--GTV----ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV  346 (537)
Q Consensus       274 ~~~~~~-~~~--~~v----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i  346 (537)
                      ...+.+ |..  .++    ..+.+|+.++.|..+|++..+...    ..+.+|...|..++|++|+++|++|+.|+.+.|
T Consensus       252 ~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~----~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~I  327 (484)
T KOG0305|consen  252 TRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVV----STLQGHRQEVCGLKWSPDGNQLASGGNDNVVFI  327 (484)
T ss_pred             cccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhh----hhhhcccceeeeeEECCCCCeeccCCCccceEe
Confidence            344444 443  222    789999999999999999887643    247889999999999999999999999999999


Q ss_pred             EEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CC
Q psy10942        347 WSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DR  425 (537)
Q Consensus       347 ~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~  425 (537)
                      ||.. ...+...+..|..                                                 .|.+++|+|- ..
T Consensus       328 wd~~-~~~p~~~~~~H~a-------------------------------------------------AVKA~awcP~q~~  357 (484)
T KOG0305|consen  328 WDGL-SPEPKFTFTEHTA-------------------------------------------------AVKALAWCPWQSG  357 (484)
T ss_pred             ccCC-CccccEEEeccce-------------------------------------------------eeeEeeeCCCccC
Confidence            9996 5555555555544                                                 7788888885 46


Q ss_pred             EEEEEe--CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEEecCCccceec
Q psy10942        426 ILISSS--GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHALKIRN  501 (537)
Q Consensus       426 ~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~i~~  501 (537)
                      +||+|+  .|+.|++||..+++.+..+.. ...|.++.|++..+-|+++.  .++.|.||++.+.+.+..+.+|...|  
T Consensus       358 lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RV--  434 (484)
T KOG0305|consen  358 LLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRV--  434 (484)
T ss_pred             ceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCccee--
Confidence            788875  589999999999999988874 56799999999887777653  46789999999999999999999999  


Q ss_pred             cCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                               ..+   ++||||..+++|+.|.++++|
T Consensus       435 ---------l~l---a~SPdg~~i~t~a~DETlrfw  458 (484)
T KOG0305|consen  435 ---------LYL---ALSPDGETIVTGAADETLRFW  458 (484)
T ss_pred             ---------EEE---EECCCCCEEEEecccCcEEec
Confidence                     999   999999999999999999999

>KOG0268|consensus

Probab=99.96  E-value=2.3e-28  Score=207.00  Aligned_cols=259  Identities=13%  Similarity=0.161  Sum_probs=206.3

Q ss_pred             cCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeC
Q psy10942        221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSL  293 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~  293 (537)
                      ||  .+.|.|+   +=+|.. ..+++|+.||.++  +||+..    ..|     ...+..|.+  ..+    ..+++++.
T Consensus        64 gH--rdGV~~l---akhp~~ls~~aSGs~DG~Vk--iWnlsq----R~~-----~~~f~AH~G~V~Gi~v~~~~~~tvgd  127 (433)
T KOG0268|consen   64 GH--RDGVSCL---AKHPNKLSTVASGSCDGEVK--IWNLSQ----REC-----IRTFKAHEGLVRGICVTQTSFFTVGD  127 (433)
T ss_pred             cc--ccccchh---hcCcchhhhhhccccCceEE--EEehhh----hhh-----hheeecccCceeeEEecccceEEecC
Confidence            99  9999999   889887 7899999999999  999998    444     566666665  222    68999999


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec----------C
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH----------K  363 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~  363 (537)
                      |.+|+.|.++...      ...+.+ ...+..+.-+..+..+++++.  .|.|||.. ...++..+...          +
T Consensus       128 DKtvK~wk~~~~p------~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~-R~~Pv~smswG~Dti~svkfNp  197 (433)
T KOG0268|consen  128 DKTVKQWKIDGPP------LHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQ-RDNPVSSMSWGADSISSVKFNP  197 (433)
T ss_pred             CcceeeeeccCCc------ceeeec-cccccccccccccccccccCc--eeeecccc-cCCccceeecCCCceeEEecCC
Confidence            9999999988741      222222 345667776667778888875  59999997 55555555443          3


Q ss_pred             C-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        364 K-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       364 ~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      . ...|+++..|+.|.+||++++.++..+....                  .-+.++|+|.+-.+++|++|..++.||++
T Consensus       198 vETsILas~~sDrsIvLyD~R~~~Pl~KVi~~m------------------RTN~IswnPeafnF~~a~ED~nlY~~DmR  259 (433)
T KOG0268|consen  198 VETSILASCASDRSIVLYDLRQASPLKKVILTM------------------RTNTICWNPEAFNFVAANEDHNLYTYDMR  259 (433)
T ss_pred             CcchheeeeccCCceEEEecccCCccceeeeec------------------cccceecCccccceeeccccccceehhhh
Confidence            2 4677888899999999999998877664332                  55779999988889999999999999998


Q ss_pred             C-ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec-CCccceeccCCCCCCccccccceeeec
Q psy10942        443 D-YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSR  520 (537)
Q Consensus       443 ~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~  520 (537)
                      . ..++....+|.+.|.++.|||.|+-+++||.|.+|+||....+.....+. .....|           .++   .||-
T Consensus       260 ~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V-----------~~V---k~S~  325 (433)
T KOG0268|consen  260 NLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHV-----------FCV---KYSM  325 (433)
T ss_pred             hhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhhee-----------eEE---EEec
Confidence            7 45788889999999999999999999999999999999998775443331 112344           677   9999


Q ss_pred             CCCEEEEEeCCCCEEeC
Q psy10942        521 NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       521 ~~~~l~s~~~dg~i~vW  537 (537)
                      |.+++++||+|+.||+|
T Consensus       326 Dskyi~SGSdd~nvRlW  342 (433)
T KOG0268|consen  326 DSKYIISGSDDGNVRLW  342 (433)
T ss_pred             cccEEEecCCCcceeee
Confidence            99999999999999999

>KOG0772|consensus

Probab=99.96  E-value=1.8e-27  Score=210.63  Aligned_cols=278  Identities=18%  Similarity=0.229  Sum_probs=216.8

Q ss_pred             CcEEEEEeCccceEEeeeccce----ehhhhcCCC--cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAV----KELYQHGLS--SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~----~~~~~~~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                      .+..+++|+.|-.|++||+...    +..+.+...  ..|.+++||+.|..|++.+.....+|+|-+.           .
T Consensus       178 ~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG-----------~  246 (641)
T KOG0772|consen  178 SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDG-----------F  246 (641)
T ss_pred             CCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCC-----------c
Confidence            6689999999999999999753    223333322  4899999999999988888888999999887           4


Q ss_pred             ceeEEe------------ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc
Q psy10942        140 KFRKQF------------VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK  207 (537)
Q Consensus       140 ~~~~~~------------~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~  207 (537)
                      +.....            +||...+++-+|+|.+.+.+++++.++.    +                 ++||+       
T Consensus       247 ~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dgt----l-----------------RiWdv-------  298 (641)
T KOG0772|consen  247 EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGT----L-----------------RIWDV-------  298 (641)
T ss_pred             eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCc----E-----------------EEEec-------
Confidence            444333            4788899999999888888888888877    9                 99999       


Q ss_pred             cccccc---ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCc
Q psy10942        208 QSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGT  284 (537)
Q Consensus       208 ~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (537)
                      +..+.+   ++...-.+.  .-+++.+   +|++||+++|+|+.||.|.  +|+.....    .                
T Consensus       299 ~~~k~q~qVik~k~~~g~--Rv~~tsC---~~nrdg~~iAagc~DGSIQ--~W~~~~~~----v----------------  351 (641)
T KOG0772|consen  299 NNTKSQLQVIKTKPAGGK--RVPVTSC---AWNRDGKLIAAGCLDGSIQ--IWDKGSRT----V----------------  351 (641)
T ss_pred             CCchhheeEEeeccCCCc--ccCceee---ecCCCcchhhhcccCCcee--eeecCCcc----c----------------
Confidence            444333   332222344  6678888   9999999999999999999  99985521    0                


Q ss_pred             ceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942        285 VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK--DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH  362 (537)
Q Consensus       285 v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  362 (537)
                               .-.+++                ...|..  .|+|+.||+||++|++-+.|+++++||++...+++....+-
T Consensus       352 ---------~p~~~v----------------k~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL  406 (641)
T KOG0772|consen  352 ---------RPVMKV----------------KDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGL  406 (641)
T ss_pred             ---------ccceEe----------------eeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCC
Confidence                     001111                234544  79999999999999999999999999999666665554433


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC------CCcE
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG------DATI  436 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i  436 (537)
                      +.                    .     +                      .-+.++|||+.++|++|..      .|.+
T Consensus       407 ~t--------------------~-----~----------------------~~tdc~FSPd~kli~TGtS~~~~~~~g~L  439 (641)
T KOG0772|consen  407 PT--------------------P-----F----------------------PGTDCCFSPDDKLILTGTSAPNGMTAGTL  439 (641)
T ss_pred             Cc--------------------c-----C----------------------CCCccccCCCceEEEecccccCCCCCceE
Confidence            22                    0     0                      5567899999999999864      4789


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                      .+||..+.+.++.+.-....|..+.|+|.-+.|..++.||+++||
T Consensus       440 ~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  440 FFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             EEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence            999999999999988788889999999998899999999999987

>KOG0973|consensus

Probab=99.95  E-value=1.1e-27  Score=231.05  Aligned_cols=300  Identities=19%  Similarity=0.180  Sum_probs=227.9

Q ss_pred             cceEEEEEeccccEEEEEe--CCceEEEEecccccCccccccc-ccceeEEeecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVT--ADHNISLYRLNSETGLEERPNK-ILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      ..|.++..+|||..+|+|+  .|+.++||+.+.-......... ..+.+.+...|.+.|.|+.|+ +|+.+|++++.++-
T Consensus        14 ~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S-~dG~~lAsGSDD~~   92 (942)
T KOG0973|consen   14 KSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFS-PDGSYLASGSDDRL   92 (942)
T ss_pred             eeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEEC-CCCCeEeeccCcce
Confidence            4699999999999999999  8999999998753211111111 245567788899999999999 89999999998877


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHH---Hhhhc--------cccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERIL---EAKFK--------QSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE  240 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~---~~~~~--------~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~  240 (537)
                          |                 .+|+...   ...+.        +..++.  +.     +|  ...|..+   +|+|++
T Consensus        93 ----v-----------------~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~-----~H--~~DV~Dv---~Wsp~~  141 (942)
T KOG0973|consen   93 ----V-----------------MIWERAEIGSGTVFGSTGGAKNVESWKVVSILR-----GH--DSDVLDV---NWSPDD  141 (942)
T ss_pred             ----E-----------------EEeeecccCCcccccccccccccceeeEEEEEe-----cC--CCcccee---ccCCCc
Confidence                7                 7777621   00111        122222  55     89  9999999   999999


Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE  320 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~  320 (537)
                      .+|++++.|++|.  +|+..+                                           .+.     ...+.+|.
T Consensus       142 ~~lvS~s~DnsVi--iwn~~t-------------------------------------------F~~-----~~vl~~H~  171 (942)
T KOG0973|consen  142 SLLVSVSLDNSVI--IWNAKT-------------------------------------------FEL-----LKVLRGHQ  171 (942)
T ss_pred             cEEEEecccceEE--EEcccc-------------------------------------------cee-----eeeeeccc
Confidence            9999888888887  777665                                           211     34567899


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT  400 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~  400 (537)
                      +.|..+.|.|-|++|++-+.|++|++|++. .....+.+..+-..                                   
T Consensus       172 s~VKGvs~DP~Gky~ASqsdDrtikvwrt~-dw~i~k~It~pf~~-----------------------------------  215 (942)
T KOG0973|consen  172 SLVKGVSWDPIGKYFASQSDDRTLKVWRTS-DWGIEKSITKPFEE-----------------------------------  215 (942)
T ss_pred             ccccceEECCccCeeeeecCCceEEEEEcc-cceeeEeeccchhh-----------------------------------
Confidence            999999999999999999999999999987 44555554443220                                   


Q ss_pred             EEEecCCCceEEeeeeEEEEcCCCCEEEEEeC----CCcEEEEECCCceeeeEeecCCcceEEEEEecC-----CC----
Q psy10942        401 LAITKDENQIITGGVWFVNFSPLDRILISSSG----DATIKLWCLTDYVCLKSLEGHDASVLRCHFINK-----GT----  467 (537)
Q Consensus       401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-----~~----  467 (537)
                              ...+.....+.|||||++|++...    -..+.|.+-.+++.-..|-||.+++.+++|+|.     .+    
T Consensus       216 --------~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~  287 (942)
T KOG0973|consen  216 --------SPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTS  287 (942)
T ss_pred             --------CCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCc
Confidence                    001115677889999999998743    346889998889989999999999999999981     12    


Q ss_pred             --------EEEEEeCCCcEEEEECCCCeeEEEecC-CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        468 --------QIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       468 --------~l~s~~~dg~v~vwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                              .+|+|+.|++|.||.....+++..... ....|           .++   +|+|||..|+.+|.||+|.+
T Consensus       288 ~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI-----------~Dm---sWspdG~~LfacS~DGtV~~  351 (942)
T KOG0973|consen  288 TQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSI-----------VDM---SWSPDGFSLFACSLDGTVAL  351 (942)
T ss_pred             cCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCce-----------eee---eEcCCCCeEEEEecCCeEEE
Confidence                    678999999999999877776654422 23456           777   99999999999999999875

>KOG0643|consensus

Probab=99.95  E-value=4.2e-27  Score=191.29  Aligned_cols=292  Identities=15%  Similarity=0.148  Sum_probs=207.8

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +..+++.+  -+.-        ++.+|++++.|....+|-..+|+.+-+..+| +.|.++..+-+.++|++|+.|.++++
T Consensus         9 HERplTqi--KyN~--------eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL   78 (327)
T KOG0643|consen    9 HERPLTQI--KYNR--------EGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL   78 (327)
T ss_pred             CccccceE--EecC--------CCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence            55667777  4444        7789999999999999999999999999977 79999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccc-cCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYL-NGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                      ||+++           ++++..++. ...|..+.|+ .+++++++.+.... ..+.|                 .++|+.
T Consensus        79 WDv~t-----------Gk~la~~k~-~~~Vk~~~F~-~~gn~~l~~tD~~mg~~~~v-----------------~~fdi~  128 (327)
T KOG0643|consen   79 WDVET-----------GKQLATWKT-NSPVKRVDFS-FGGNLILASTDKQMGYTCFV-----------------SVFDIR  128 (327)
T ss_pred             EEcCC-----------CcEEEEeec-CCeeEEEeec-cCCcEEEEEehhhcCcceEE-----------------EEEEcc
Confidence            99999           677877774 4458999999 67776665554433 12234                 444440


Q ss_pred             HHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeee
Q psy10942        202 LEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAF  279 (537)
Q Consensus       202 ~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~  279 (537)
                      .........++.  +.     .+  ...++.+                        +|....                  
T Consensus       129 ~~~~~~~s~ep~~kI~-----t~--~skit~a------------------------~Wg~l~------------------  159 (327)
T KOG0643|consen  129 DDSSDIDSEEPYLKIP-----TP--DSKITSA------------------------LWGPLG------------------  159 (327)
T ss_pred             CChhhhcccCceEEec-----CC--ccceeee------------------------eecccC------------------
Confidence            000000111111  11     22  3333333                        555444                  


Q ss_pred             eeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE
Q psy10942        280 YTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL  359 (537)
Q Consensus       280 ~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  359 (537)
                            ..+++|..||.|.+||++++...    ......|...|+.|+++||..++++++.|.+-++||.. ....++++
T Consensus       160 ------~~ii~Ghe~G~is~~da~~g~~~----v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~-tl~v~Kty  228 (327)
T KOG0643|consen  160 ------ETIIAGHEDGSISIYDARTGKEL----VDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVR-TLEVLKTY  228 (327)
T ss_pred             ------CEEEEecCCCcEEEEEcccCcee----eechhhhccccccccccCCcceEEecccCccceeeecc-ceeeEEEe
Confidence                  35566666666666666666543    34456788899999999999999999999999999998 55555554


Q ss_pred             EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE---
Q psy10942        360 RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI---  436 (537)
Q Consensus       360 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i---  436 (537)
                      ....                                                  ++++.+++|....++.|+.....   
T Consensus       229 ~te~--------------------------------------------------PvN~aaisP~~d~VilgGGqeA~dVT  258 (327)
T KOG0643|consen  229 TTER--------------------------------------------------PVNTAAISPLLDHVILGGGQEAMDVT  258 (327)
T ss_pred             eecc--------------------------------------------------cccceecccccceEEecCCceeeeee
Confidence            4321                                                  67777788876666665542221   


Q ss_pred             -----------EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        437 -----------KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       437 -----------~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                                 ++|++-..+.+..+++|-++|++++|+|+|+..++|++||.||+.-.+.
T Consensus       259 TT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  259 TTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             eecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence                       2233333456778899999999999999999999999999999986643

>KOG0289|consensus

Probab=99.95  E-value=5e-27  Score=203.54  Aligned_cols=278  Identities=16%  Similarity=0.208  Sum_probs=227.4

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD  177 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~  177 (537)
                      .+.++...|....+++|+.|.++.++|...           .+.+..++||...|+.+.|+ ++...+++++.+..    
T Consensus       221 gi~ald~~~s~~~ilTGG~d~~av~~d~~s-----------~q~l~~~~Gh~kki~~v~~~-~~~~~v~~aSad~~----  284 (506)
T KOG0289|consen  221 GITALDIIPSSSKILTGGEDKTAVLFDKPS-----------NQILATLKGHTKKITSVKFH-KDLDTVITASADEI----  284 (506)
T ss_pred             CeeEEeecCCCCcceecCCCCceEEEecch-----------hhhhhhccCcceEEEEEEec-cchhheeecCCcce----
Confidence            688888888878899999999999999999           78999999999999999999 77777888888888    


Q ss_pred             ccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                      |                 ++|..       ....+.  ..     .|  ..+|+.+   ..+|.|+||++++.|+...  
T Consensus       285 i-----------------~vws~-------~~~s~~~~~~-----~h--~~~V~~l---s~h~tgeYllsAs~d~~w~--  328 (506)
T KOG0289|consen  285 I-----------------RVWSV-------PLSSEPTSSR-----PH--EEPVTGL---SLHPTGEYLLSASNDGTWA--  328 (506)
T ss_pred             E-----------------Eeecc-------ccccCccccc-----cc--cccceee---eeccCCcEEEEecCCceEE--
Confidence            9                 99998       555444  66     89  9999999   9999999999999999887  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      +.++.++.                                .+.+-..+              ...-.+++.+|+|||..|
T Consensus       329 Fsd~~~g~--------------------------------~lt~vs~~--------------~s~v~~ts~~fHpDgLif  362 (506)
T KOG0289|consen  329 FSDISSGS--------------------------------QLTVVSDE--------------TSDVEYTSAAFHPDGLIF  362 (506)
T ss_pred             EEEccCCc--------------------------------EEEEEeec--------------cccceeEEeeEcCCceEE
Confidence            77766631                                11111111              112347899999999999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      .+|..|+.+++||+. .+..+..+.+|..                                                 +|
T Consensus       363 gtgt~d~~vkiwdlk-s~~~~a~Fpght~-------------------------------------------------~v  392 (506)
T KOG0289|consen  363 GTGTPDGVVKIWDLK-SQTNVAKFPGHTG-------------------------------------------------PV  392 (506)
T ss_pred             eccCCCceEEEEEcC-CccccccCCCCCC-------------------------------------------------ce
Confidence            999999999999998 4444444444443                                                 88


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEEC--CCCeeEEEe
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSI--KTSTCVSTF  492 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~--~~~~~~~~~  492 (537)
                      ..++|+.+|.+|+++..|+.|++||++..+...++.-.. .++.++.|.+.|.+|+.++.|=.|++++-  .+..++..+
T Consensus       393 k~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~  472 (506)
T KOG0289|consen  393 KAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKEL  472 (506)
T ss_pred             eEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehh
Confidence            999999999999999999999999999887777776432 36999999999999999988766666653  256777788


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..|.+..           +.+   .|....++++++|.|..++++
T Consensus       473 ~~~sg~s-----------t~v---~Fg~~aq~l~s~smd~~l~~~  503 (506)
T KOG0289|consen  473 ADHSGLS-----------TGV---RFGEHAQYLASTSMDAILRLY  503 (506)
T ss_pred             hhccccc-----------cee---eecccceEEeeccchhheEEe
Confidence            8888777           888   999999999999999998874

>KOG0310|consensus

Probab=99.95  E-value=6e-27  Score=206.29  Aligned_cols=289  Identities=19%  Similarity=0.277  Sum_probs=223.4

Q ss_pred             EEeeeccceehhhhcCCCcceEEEEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc
Q psy10942         79 LHYYETSAVKELYQHGLSSPLVRIVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL  157 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  157 (537)
                      .+.|+-.+.  ....+.+..|.+++|||...+ +|+.+. -.+.||+..+           ....+++....+.|.++.|
T Consensus        11 ~~~w~~~~~--~~~~ke~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~-----------~~~~k~~srFk~~v~s~~f   76 (487)
T KOG0310|consen   11 IRYWRQETF--PPVHKEHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVT-----------RSVRKTFSRFKDVVYSVDF   76 (487)
T ss_pred             chhhhhhcc--cccccccCcceeEecCCCCCCceEEecc-cEEEEEecch-----------hhhhhhHHhhccceeEEEe
Confidence            455553332  223344578999999997765 555554 5699999998           6777778888888999999


Q ss_pred             ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccC
Q psy10942        158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGK  235 (537)
Q Consensus       158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~  235 (537)
                      . .|+..++++...+.    |                 +++|.       ++...+  +.     +|  +.+|...   .
T Consensus        77 R-~DG~LlaaGD~sG~----V-----------------~vfD~-------k~r~iLR~~~-----ah--~apv~~~---~  117 (487)
T KOG0310|consen   77 R-SDGRLLAAGDESGH----V-----------------KVFDM-------KSRVILRQLY-----AH--QAPVHVT---K  117 (487)
T ss_pred             e-cCCeEEEccCCcCc----E-----------------EEecc-------ccHHHHHHHh-----hc--cCceeEE---E
Confidence            8 78887766655554    9                 99998       664444  77     99  9999999   9


Q ss_pred             cccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        236 TVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       236 ~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      |+|+++ .+++|++|+.++  +|++.+                                           ...     ..
T Consensus       118 f~~~d~t~l~s~sDd~v~k--~~d~s~-------------------------------------------a~v-----~~  147 (487)
T KOG0310|consen  118 FSPQDNTMLVSGSDDKVVK--YWDLST-------------------------------------------AYV-----QA  147 (487)
T ss_pred             ecccCCeEEEecCCCceEE--EEEcCC-------------------------------------------cEE-----EE
Confidence            999664 555677777777  777665                                           221     22


Q ss_pred             cccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942        315 HKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  393 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  393 (537)
                      .+.+|++.|.|.+|+|. +..+++|+.||.|++||++.....+..+.                                 
T Consensus       148 ~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln---------------------------------  194 (487)
T KOG0310|consen  148 ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN---------------------------------  194 (487)
T ss_pred             EecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec---------------------------------
Confidence            34689999999999995 56899999999999999994333332222                                 


Q ss_pred             CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                      |..                 +|..+.+-|.|..+++++. ..|++||+.+ ++.+.....|...|+|+++..++..|+++
T Consensus       195 hg~-----------------pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~  256 (487)
T KOG0310|consen  195 HGC-----------------PVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSG  256 (487)
T ss_pred             CCC-----------------ceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeec
Confidence            111                 7888899999999999876 5899999985 45555556699999999999999999999


Q ss_pred             eCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +-|+.|++||+.+.+.+..+.- .++|           .++   +.+||++.++.|..||.+.+
T Consensus       257 sLD~~VKVfd~t~~Kvv~s~~~-~~pv-----------Lsi---avs~dd~t~viGmsnGlv~~  305 (487)
T KOG0310|consen  257 SLDRHVKVFDTTNYKVVHSWKY-PGPV-----------LSI---AVSPDDQTVVIGMSNGLVSI  305 (487)
T ss_pred             ccccceEEEEccceEEEEeeec-ccce-----------eeE---EecCCCceEEEecccceeee
Confidence            9999999999989998888754 5678           888   99999999999999998753

>KOG0299|consensus

Probab=99.95  E-value=7.5e-27  Score=204.08  Aligned_cols=302  Identities=21%  Similarity=0.244  Sum_probs=221.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee-eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|+|++++  +|.++.++++.+|+|.-|++.+|+..+ .++.. .+...  ...|                        
T Consensus       143 ~s~~~vals--~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~--~~~~------------------------  193 (479)
T KOG0299|consen  143 LSVTSVALS--PDDKRVFSASKDGTILKWDVLTGKKDRYIIERD-EVLKS--HGNP------------------------  193 (479)
T ss_pred             CcceEEEee--ccccceeecCCCcceeeeehhcCcccccccccc-hhhhh--ccCC------------------------
Confidence            468899999  899999999999999999999998763 33211 11000  0011                        


Q ss_pred             eeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                           .+.-. -.+...+.+++.|+||+|||+|+.|..|.||+.++           .+.++.+.+|.+.|.+++|- ..
T Consensus       194 -----~k~~r-~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t-----------~ehv~~~~ghr~~V~~L~fr-~g  255 (479)
T KOG0299|consen  194 -----LKESR-KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDT-----------LEHVKVFKGHRGAVSSLAFR-KG  255 (479)
T ss_pred             -----CCccc-ccccceeEEEEEcCCCcEEEecCCCceEEEecCcc-----------cchhhcccccccceeeeeee-cC
Confidence                 00011 13346899999999999999999999999999999           78889999999999999998 77


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccC
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKE  239 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~  239 (537)
                      .+.|++++.++.    +                 ++|++       +.....  +.     ||  ...|.++   ....-
T Consensus       256 t~~lys~s~Drs----v-----------------kvw~~-------~~~s~vetly-----GH--qd~v~~I---daL~r  297 (479)
T KOG0299|consen  256 TSELYSASADRS----V-----------------KVWSI-------DQLSYVETLY-----GH--QDGVLGI---DALSR  297 (479)
T ss_pred             ccceeeeecCCc----e-----------------EEEeh-------hHhHHHHHHh-----CC--ccceeee---chhcc
Confidence            888899999988    9                 99999       666665  77     99  9999999   65555


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      ++.+-.|+.|++++  +|++..                                           ..      ...+.+|
T Consensus       298 eR~vtVGgrDrT~r--lwKi~e-------------------------------------------es------qlifrg~  326 (479)
T KOG0299|consen  298 ERCVTVGGRDRTVR--LWKIPE-------------------------------------------ES------QLIFRGG  326 (479)
T ss_pred             cceEEeccccceeE--EEeccc-------------------------------------------cc------eeeeeCC
Confidence            55555555666666  666533                                           22      2234566


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      .+.+.|++|-. ...+++|+.+|.|.+|++. ..+++.+.. .|.....+            +.        ....    
T Consensus       327 ~~sidcv~~In-~~HfvsGSdnG~IaLWs~~-KKkplf~~~~AHgv~~~~------------~~--------~~~~----  380 (479)
T KOG0299|consen  327 EGSIDCVAFIN-DEHFVSGSDNGSIALWSLL-KKKPLFTSRLAHGVIPEL------------DP--------VNGN----  380 (479)
T ss_pred             CCCeeeEEEec-ccceeeccCCceEEEeeec-ccCceeEeeccccccCCc------------cc--------cccc----
Confidence            77899999984 4578999999999999998 555554443 33321100            00        0000    


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc----eeeeEeecCCcceEEEEEecCCCEEEEE-e
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY----VCLKSLEGHDASVLRCHFINKGTQIVST-G  473 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~  473 (537)
                                    ..|++++..|...++++|+.+|.|++|-+..+    +++..+. -.+-|++++|+++|+.|++| +
T Consensus       381 --------------~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiG  445 (479)
T KOG0299|consen  381 --------------FWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIG  445 (479)
T ss_pred             --------------cceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecc
Confidence                          07899999999999999999999999998876    4455555 56789999999999966655 4


Q ss_pred             CCCcEEEE
Q psy10942        474 ADGLLKLW  481 (537)
Q Consensus       474 ~dg~v~vw  481 (537)
                      ....+--|
T Consensus       446 kEhRlGRW  453 (479)
T KOG0299|consen  446 KEHRLGRW  453 (479)
T ss_pred             ccccccee
Confidence            44444444

>KOG0647|consensus

Probab=99.95  E-value=3.8e-27  Score=194.96  Aligned_cols=279  Identities=13%  Similarity=0.155  Sum_probs=211.6

Q ss_pred             cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      +.|.+++||| ...++++++.|++||+|+++...         ....+....|.++|.+++|+ .++..+++++.++.  
T Consensus        28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g---------~~~~ka~~~~~~PvL~v~Ws-ddgskVf~g~~Dk~--   95 (347)
T KOG0647|consen   28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG---------QLVPKAQQSHDGPVLDVCWS-DDGSKVFSGGCDKQ--   95 (347)
T ss_pred             cchheeEeccccCceEEecccCCceEEEEEecCC---------cccchhhhccCCCeEEEEEc-cCCceEEeeccCCc--
Confidence            6899999999 55567788999999999998720         12225566789999999999 88999999988888  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCC--eeeeccCCCcc
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEED--LFPRQSMEPST  252 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~--~l~~~~~d~~i  252 (537)
                        +                 ++||+       .+++.. +.     .|  .++|.++   .|-+...  .|++|+.|+++
T Consensus        96 --~-----------------k~wDL-------~S~Q~~~v~-----~H--d~pvkt~---~wv~~~~~~cl~TGSWDKTl  139 (347)
T KOG0647|consen   96 --A-----------------KLWDL-------ASGQVSQVA-----AH--DAPVKTC---HWVPGMNYQCLVTGSWDKTL  139 (347)
T ss_pred             --e-----------------EEEEc-------cCCCeeeee-----ec--ccceeEE---EEecCCCcceeEecccccce
Confidence              9                 99999       888777 88     89  9999999   7776654  89999999999


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      +  .||.+.........+  |-+.+......  .+++.+..++.|.+|+++.+....+.   ....-.-.++|++..+|.
T Consensus       140 K--fWD~R~~~pv~t~~L--PeRvYa~Dv~~--pm~vVata~r~i~vynL~n~~te~k~---~~SpLk~Q~R~va~f~d~  210 (347)
T KOG0647|consen  140 K--FWDTRSSNPVATLQL--PERVYAADVLY--PMAVVATAERHIAVYNLENPPTEFKR---IESPLKWQTRCVACFQDK  210 (347)
T ss_pred             e--ecccCCCCeeeeeec--cceeeehhccC--ceeEEEecCCcEEEEEcCCCcchhhh---hcCcccceeeEEEEEecC
Confidence            9  999997432211111  11111100001  57888999999999999877543322   112233468899999998


Q ss_pred             CEEEEEeCCCcEEEEEccCC-ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        333 KLLASGSLDKTVKVWSTTGG-LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                      ...+.|+-+|.+-+..+... .+.-..++.|.....     .++                     .|+            
T Consensus       211 ~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~-----~~~---------------------~VY------------  252 (347)
T KOG0647|consen  211 DGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS-----VND---------------------DVY------------  252 (347)
T ss_pred             CceEeeeecceEEEEecCCCCccCceeEEEeccCCC-----CCC---------------------ceE------------
Confidence            88899999999999988832 133445555553111     000                     011            


Q ss_pred             EeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                        .|++++|+|....|++++.||++.+||-.....+.+.+.|..+|+++.|+.+|.++|-+
T Consensus       253 --aVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  253 --AVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             --EecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence              78899999999999999999999999998888888889999999999999999998855

>KOG1446|consensus

Probab=99.95  E-value=3.1e-26  Score=191.38  Aligned_cols=286  Identities=14%  Similarity=0.170  Sum_probs=222.1

Q ss_pred             ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCc-ceEEEEEeccccEEEEEeC--CceEE
Q psy10942         45 YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSS-PLVRIVRSSVKRMYAVVTA--DHNIS  121 (537)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~~--d~~i~  121 (537)
                      ...+.++  -+.+        ++.++++.++|..|++||..+++.+.++.... .+..+.|......+..++.  |.+|+
T Consensus        14 ~~~i~sl--~fs~--------~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr   83 (311)
T KOG1446|consen   14 NGKINSL--DFSD--------DGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR   83 (311)
T ss_pred             CCceeEE--EecC--------CCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence            4556667  3466        77889999999999999999999999888663 7888888766666666665  88999


Q ss_pred             EEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       122 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                      ..++.+           .+.++.+.||...|.+++.+|-+ ..+++++.|+.    |                 ++||+ 
T Consensus        84 yLsl~d-----------NkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~t----v-----------------rLWDl-  129 (311)
T KOG1446|consen   84 YLSLHD-----------NKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKT----V-----------------RLWDL-  129 (311)
T ss_pred             EEEeec-----------CceEEEcCCCCceEEEEEecCCC-CeEEecccCCe----E-----------------EeeEe-
Confidence            999999           79999999999999999999544 66678888887    9                 99999 


Q ss_pred             HHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        202 LEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       202 ~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                            +..+|+ +.     .   ...--..   +|.|+|-++|++.....|+  ++|++.-....              
T Consensus       130 ------R~~~cqg~l-----~---~~~~pi~---AfDp~GLifA~~~~~~~Ik--LyD~Rs~dkgP--------------  176 (311)
T KOG1446|consen  130 ------RVKKCQGLL-----N---LSGRPIA---AFDPEGLIFALANGSELIK--LYDLRSFDKGP--------------  176 (311)
T ss_pred             ------cCCCCceEE-----e---cCCCcce---eECCCCcEEEEecCCCeEE--EEEecccCCCC--------------
Confidence                  888887 22     1   1122233   7899999999888877888  88887632111              


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  360 (537)
                                      -..+.+..             +-....+.|.|||||+.++.++..+.+++.|.- .+..+..+.
T Consensus       177 ----------------F~tf~i~~-------------~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf-~G~~~~tfs  226 (311)
T KOG1446|consen  177 ----------------FTTFSITD-------------NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF-DGTVKSTFS  226 (311)
T ss_pred             ----------------ceeEccCC-------------CCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc-CCcEeeeEe
Confidence                            11111111             224567899999999999999999999999988 566777776


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      .++....                                              --...+|+||++++++|+.||+|.+|+
T Consensus       227 ~~~~~~~----------------------------------------------~~~~a~ftPds~Fvl~gs~dg~i~vw~  260 (311)
T KOG1446|consen  227 GYPNAGN----------------------------------------------LPLSATFTPDSKFVLSGSDDGTIHVWN  260 (311)
T ss_pred             eccCCCC----------------------------------------------cceeEEECCCCcEEEEecCCCcEEEEE
Confidence            6654110                                              114578999999999999999999999


Q ss_pred             CCCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        441 LTDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       441 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      +++++.+..+++ +.+++.++.|+|.-.+++++  +..+.+|=...
T Consensus       261 ~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~  304 (311)
T KOG1446|consen  261 LETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDE  304 (311)
T ss_pred             cCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEeccc
Confidence            999999999998 78999999999986666665  44688886543

>KOG0641|consensus

Probab=99.95  E-value=5.5e-26  Score=180.28  Aligned_cols=308  Identities=18%  Similarity=0.160  Sum_probs=219.8

Q ss_pred             hhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCc---ccccccc-cceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         91 YQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGL---EERPNKI-LKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        91 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~---~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      ..+.....|.+++|.|.|.+.|+|++..+++|--...-...   ...+..+ ....++-+.|.+.|+|.+|+ +++..++
T Consensus        27 ~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws-~~gelia  105 (350)
T KOG0641|consen   27 NILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWS-PCGELIA  105 (350)
T ss_pred             EEecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEec-CccCeEE
Confidence            33444468999999999999999999999998755432111   1122222 33445566789999999999 8899999


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccccc--ccccccCCCcCeEEEEeccCcccCCCeee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKH--NTERLGRDELKTVTLLERGKTVKEEDLFP  244 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~--~~~~~~h~~~~~v~~~~~~~~s~~~~~l~  244 (537)
                      ++++++.    |                 ++...       +...+...  -.++.-|  .+.|..+   +|-.+..   
T Consensus       106 tgsndk~----i-----------------k~l~f-------n~dt~~~~g~dle~nmh--dgtirdl---~fld~~~---  149 (350)
T KOG0641|consen  106 TGSNDKT----I-----------------KVLPF-------NADTCNATGHDLEFNMH--DGTIRDL---AFLDDPE---  149 (350)
T ss_pred             ecCCCce----E-----------------EEEec-------ccccccccCcceeeeec--CCceeee---EEecCCC---
Confidence            9888887    7                 55433       22222222  1122255  6666666   5543210   


Q ss_pred             eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE-EeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        245 RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS-GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       245 ~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                                      .                     .. ..+++ |..|..|++-|...++.     ...+.+|.+.|
T Consensus       150 ----------------s---------------------~~-~il~s~gagdc~iy~tdc~~g~~-----~~a~sghtghi  186 (350)
T KOG0641|consen  150 ----------------S---------------------GG-AILASAGAGDCKIYITDCGRGQG-----FHALSGHTGHI  186 (350)
T ss_pred             ----------------c---------------------Cc-eEEEecCCCcceEEEeecCCCCc-----ceeecCCcccE
Confidence                            0                     00 12222 23456677777777765     34467888888


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      .++ ++-++-.+++|+.|.+|++||++ -...++++.....+.                                     
T Consensus       187 lal-yswn~~m~~sgsqdktirfwdlr-v~~~v~~l~~~~~~~-------------------------------------  227 (350)
T KOG0641|consen  187 LAL-YSWNGAMFASGSQDKTIRFWDLR-VNSCVNTLDNDFHDG-------------------------------------  227 (350)
T ss_pred             EEE-EEecCcEEEccCCCceEEEEeee-ccceeeeccCcccCC-------------------------------------
Confidence            876 44468899999999999999998 445555443321100                                     


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                           -+-+..+.+++..|.|++|++|-.|....+||++.+.+++.+..|...|.++.|||...||++++.|..|++-|+
T Consensus       228 -----glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdl  302 (350)
T KOG0641|consen  228 -----GLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDL  302 (350)
T ss_pred             -----CcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeec
Confidence                 001117888999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCeeE-----EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        484 KTSTCV-----STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       484 ~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      + |.+.     .....|.+.+           -.+   -|+|..--+++.+.|.++.+|
T Consensus       303 q-gdla~el~~~vv~ehkdk~-----------i~~---rwh~~d~sfisssadkt~tlw  346 (350)
T KOG0641|consen  303 Q-GDLAHELPIMVVAEHKDKA-----------IQC---RWHPQDFSFISSSADKTATLW  346 (350)
T ss_pred             c-cchhhcCceEEEEeccCce-----------EEE---EecCccceeeeccCcceEEEe
Confidence            5 3332     3344677766           667   899999999999999999998

>KOG0313|consensus

Probab=99.95  E-value=1.3e-26  Score=197.58  Aligned_cols=273  Identities=14%  Similarity=0.164  Sum_probs=214.7

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehh----
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKEL----   90 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~----   90 (537)
                      +++|+||+-||.+++||. .|+..+++. +..++..+..+....       ....+++++.|.++++|.++.++..    
T Consensus       115 ~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~-------~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~  186 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNS-------SSCLFVSASMDQTLRLWKWNVGENKVKAL  186 (423)
T ss_pred             CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCC-------ccceEEEecCCceEEEEEecCchhhhhHH
Confidence            578999999999999995 566666555 777888774433332       3457999999999999999877543    


Q ss_pred             hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCc--c------------cccccccceeEEeecchhhhhhh
Q psy10942         91 YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGL--E------------ERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        91 ~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      ..-.+| ..|.++...++|..+++|+.|.+|.||+.......  +            ........++.++.||.++|.++
T Consensus       187 ~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V  266 (423)
T KOG0313|consen  187 KVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV  266 (423)
T ss_pred             hHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE
Confidence            233344 68999999999999999999999999994332111  1            11122244667889999999999


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~  233 (537)
                      .|++  ...+++++-+..    |                 +.||+       .++...  +.      -  ...+.++  
T Consensus       267 ~w~d--~~v~yS~SwDHT----I-----------------k~WDl-------etg~~~~~~~------~--~ksl~~i--  306 (423)
T KOG0313|consen  267 VWSD--ATVIYSVSWDHT----I-----------------KVWDL-------ETGGLKSTLT------T--NKSLNCI--  306 (423)
T ss_pred             EEcC--CCceEeecccce----E-----------------EEEEe-------ecccceeeee------c--CcceeEe--
Confidence            9983  667778888877    9                 99999       888887  33      2  5789999  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-------eEEEEEeCCCeEEEEECCC
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-------ELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~~~  304 (537)
                       .++|..++|++|+.|..++  +||.+.+.....      ...+.+|.+  .++       ..|++++.|+++++||+++
T Consensus       307 -~~~~~~~Ll~~gssdr~ir--l~DPR~~~gs~v------~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS  377 (423)
T KOG0313|consen  307 -SYSPLSKLLASGSSDRHIR--LWDPRTGDGSVV------SQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS  377 (423)
T ss_pred             -ecccccceeeecCCCCcee--ecCCCCCCCcee------EEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence             9999999999999999999  999998744322      567778877  222       7899999999999999998


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      ....    ...+.+|...|.++.|+ ++..+++|+.|.+|+++.-.
T Consensus       378 ~k~p----lydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  378 TKAP----LYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             CCCc----ceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            7732    44567899999999998 57799999999999998654

>KOG0308|consensus

Probab=99.95  E-value=8.5e-27  Score=212.15  Aligned_cols=285  Identities=19%  Similarity=0.248  Sum_probs=219.1

Q ss_pred             ccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecc
Q psy10942        106 SVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLG  185 (537)
Q Consensus       106 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~  185 (537)
                      |.++||.+|++||.|++|+.......+.     ......++.|.++|+.++.. .+++.+++++.+..    |       
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s-----~~~~asme~HsDWVNDiiL~-~~~~tlIS~SsDtT----V-------   97 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPS-----TPYIASMEHHSDWVNDIILC-GNGKTLISASSDTT----V-------   97 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcc-----cchhhhhhhhHhHHhhHHhh-cCCCceEEecCCce----E-------
Confidence            6777899999999999999876422111     22467889999999999998 77878999999988    9       


Q ss_pred             cCCCcchhhHHHHHHHHHhhhcccc--ccc--ccccccccCCCcCeEEEEeccCc-ccCCCeeeeccCCCcceecccccc
Q psy10942        186 ANRSHNEWFDKTFERILEAKFKQSS--SQQ--KHNTERLGRDELKTVTLLERGKT-VKEEDLFPRQSMEPSTLEELEKRK  260 (537)
Q Consensus       186 ~~~~~~~~~~~~wd~~~~~~~~~~~--~~~--l~~~~~~~h~~~~~v~~~~~~~~-s~~~~~l~~~~~d~~i~~~iw~~~  260 (537)
                                ++|+.       ...  -|.  +.     .|  .+.|.|+   ++ .++...+|+|+-|+.|.  +||+.
T Consensus        98 ----------K~W~~-------~~~~~~c~stir-----~H--~DYVkcl---a~~ak~~~lvaSgGLD~~If--lWDin  148 (735)
T KOG0308|consen   98 ----------KVWNA-------HKDNTFCMSTIR-----TH--KDYVKCL---AYIAKNNELVASGGLDRKIF--LWDIN  148 (735)
T ss_pred             ----------EEeec-------ccCcchhHhhhh-----cc--cchheee---eecccCceeEEecCCCccEE--EEEcc
Confidence                      99999       555  344  66     89  9999999   88 78888999999999999  99998


Q ss_pred             CCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC
Q psy10942        261 TYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL  340 (537)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  340 (537)
                      .+....       .                ++. ..+..             .....++..+|.+++.++.|..+++|+.
T Consensus       149 ~~~~~l-------~----------------~s~-n~~t~-------------~sl~sG~k~siYSLA~N~t~t~ivsGgt  191 (735)
T KOG0308|consen  149 TGTATL-------V----------------ASF-NNVTV-------------NSLGSGPKDSIYSLAMNQTGTIIVSGGT  191 (735)
T ss_pred             Ccchhh-------h----------------hhc-ccccc-------------ccCCCCCccceeeeecCCcceEEEecCc
Confidence            742100       0                000 00100             0111267788999999999988999999


Q ss_pred             CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE
Q psy10942        341 DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF  420 (537)
Q Consensus       341 d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~  420 (537)
                      .+.+++||.+ ..+.+..+.+|.+                                                 .|..+..
T Consensus       192 ek~lr~wDpr-t~~kimkLrGHTd-------------------------------------------------NVr~ll~  221 (735)
T KOG0308|consen  192 EKDLRLWDPR-TCKKIMKLRGHTD-------------------------------------------------NVRVLLV  221 (735)
T ss_pred             ccceEEeccc-cccceeeeecccc-------------------------------------------------ceEEEEE
Confidence            9999999988 5666666667766                                                 7888889


Q ss_pred             cCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee
Q psy10942        421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR  500 (537)
Q Consensus       421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~  500 (537)
                      ++||..+++++.||+|++||+...+++.++..|...|.++..+|+-.++++|+.||.|..=|+++......+-..+.++ 
T Consensus       222 ~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv-  300 (735)
T KOG0308|consen  222 NDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPV-  300 (735)
T ss_pred             cCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCch-
Confidence            9999999999999999999999999999999999999999999999999999999999999998843333333334445 


Q ss_pred             ccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        501 NSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                ..+   ..+.+.+-+-+++.|+.|+=|
T Consensus       301 ----------~~l---~~~~~~~~~WvtTtds~I~rW  324 (735)
T KOG0308|consen  301 ----------LKL---HLHEHDNSVWVTTTDSSIKRW  324 (735)
T ss_pred             ----------hhh---hhccccCCceeeeccccceec
Confidence                      444   555444443445566666655

>KOG0277|consensus

Probab=99.95  E-value=2.5e-27  Score=191.16  Aligned_cols=271  Identities=17%  Similarity=0.184  Sum_probs=213.6

Q ss_pred             eeeeeccCCcceEEEec------CcceEEEEEcCccceee---eeccccccceeeeEeecCccccccCCcEEEEEeCccc
Q psy10942          7 CFDVIPQITSEFSVHCG------RDKVLFTWDLSSRKQLR---SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS   77 (537)
Q Consensus         7 ~~~~~~~~~~~~l~s~~------~~g~v~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (537)
                      ++.|||..++++.++.+      .+|.+.|-++...+-+.   .+...+.+-.+  .+++.       ....+++++.||
T Consensus        13 svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV--~Wse~-------~e~~~~~a~GDG   83 (311)
T KOG0277|consen   13 SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDV--AWSEN-------HENQVIAASGDG   83 (311)
T ss_pred             eeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEe--eecCC-------CcceEEEEecCc
Confidence            57899877777655542      46889999987555444   44455566666  66775       567788888899


Q ss_pred             eEEeeeccc-eehhhhcCCC-cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         78 LLHYYETSA-VKELYQHGLS-SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        78 ~i~~wd~~~-~~~~~~~~~~-~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      .+++||+.. ...++.++.| .+|.++.|++-.+ .+++++.|++|++|+..-           .+.++++.||...|+.
T Consensus        84 SLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r-----------~~Sv~Tf~gh~~~Iy~  152 (311)
T KOG0277|consen   84 SLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR-----------PNSVQTFNGHNSCIYQ  152 (311)
T ss_pred             eEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC-----------CcceEeecCCccEEEE
Confidence            999999653 3567777766 5999999998544 577789999999999988           6788999999999999


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc-ccccccccCCCcCeEEEEe
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ-KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~-l~~~~~~~h~~~~~v~~~~  232 (537)
                      .+|+|...+.++++++++.    +                 ++||+       +. ++.+ +.     .|  ...|.|+ 
T Consensus       153 a~~sp~~~nlfas~Sgd~~----l-----------------~lwdv-------r~~gk~~~i~-----ah--~~Eil~c-  196 (311)
T KOG0277|consen  153 AAFSPHIPNLFASASGDGT----L-----------------RLWDV-------RSPGKFMSIE-----AH--NSEILCC-  196 (311)
T ss_pred             EecCCCCCCeEEEccCCce----E-----------------EEEEe-------cCCCceeEEE-----ec--cceeEee-
Confidence            9999988999888888877    9                 99998       43 3333 67     89  8999999 


Q ss_pred             ccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-------eEEEEEeCCCeEEEEEC
Q psy10942        233 RGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-------ELLASGSLDKTVKVWST  302 (537)
Q Consensus       233 ~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~  302 (537)
                        .|+. +...+++|+.|+.|+  .||++.-..+        +..+.+|.-  ..+       ..|++++.|-++++||.
T Consensus       197 --dw~ky~~~vl~Tg~vd~~vr--~wDir~~r~p--------l~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~  264 (311)
T KOG0277|consen  197 --DWSKYNHNVLATGGVDNLVR--GWDIRNLRTP--------LFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDP  264 (311)
T ss_pred             --cccccCCcEEEecCCCceEE--EEehhhcccc--------ceeecCCceEEEEEecCcchhhHhhhccccceEEeccc
Confidence              8876 456889999999999  9999985433        333444432  111       68999999999999999


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEc
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWST  349 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~  349 (537)
                      ..+...    ......|+.-+..+.|++ ++.++++.+.|+.++||+.
T Consensus       265 ~~~ds~----~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  265 ERQDSA----IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ccchhh----hhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            866543    556678999999999998 6779999999999999985

>KOG2048|consensus

Probab=99.95  E-value=1.9e-24  Score=198.05  Aligned_cols=400  Identities=13%  Similarity=0.097  Sum_probs=264.1

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|.+|+|+   ++..|++.+-+|.|.-||+.++++.+.+. ...+|-++  ...|        ....++.+++||.+..
T Consensus        70 rsIE~L~W~---e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsi--ai~p--------~~~~l~IgcddGvl~~  136 (691)
T KOG2048|consen   70 RSIESLAWA---EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSI--AINP--------ENTILAIGCDDGVLYD  136 (691)
T ss_pred             CceeeEEEc---cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEE--EeCC--------ccceEEeecCCceEEE
Confidence            357889999   66789999999999999999999999887 44566666  4577        4468888999998888


Q ss_pred             eeccceehhhhcCC---CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE-------eec-chh
Q psy10942         82 YETSAVKELYQHGL---SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ-------FVG-FSD  150 (537)
Q Consensus        82 wd~~~~~~~~~~~~---~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~-~~~  150 (537)
                      .+...++..+....   .+.|.+++|+|++..||.|+.||.|++||...+           ..+..       +.. ..-
T Consensus       137 ~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~-----------~t~~~~~~~~d~l~k~~~~  205 (691)
T KOG2048|consen  137 FSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSG-----------QTLHIITMQLDRLSKREPT  205 (691)
T ss_pred             EecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCC-----------ceEEEeeecccccccCCce
Confidence            88777765443322   268999999999999999999999999999984           32321       111 223


Q ss_pred             hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeE
Q psy10942        151 EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTV  228 (537)
Q Consensus       151 ~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v  228 (537)
                      .|.++.|. . ++.|+++...    |.|                 .+||.       ..+...  ..     .|  ...|
T Consensus       206 iVWSv~~L-r-d~tI~sgDS~----G~V-----------------~FWd~-------~~gTLiqS~~-----~h--~adV  248 (691)
T KOG2048|consen  206 IVWSVLFL-R-DSTIASGDSA----GTV-----------------TFWDS-------IFGTLIQSHS-----CH--DADV  248 (691)
T ss_pred             EEEEEEEe-e-cCcEEEecCC----ceE-----------------EEEcc-------cCcchhhhhh-----hh--hcce
Confidence            46777776 2 4455555444    449                 99999       777666  66     78  8999


Q ss_pred             EEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc----eEEEEEeCCCeEEEEE---
Q psy10942        229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV----ELLASGSLDKTVKVWS---  301 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~l~~~~~d~~i~i~~---  301 (537)
                      .++   +..++++++++++.|+.+.  .+........+...   ..+.+..|.-.++    ..+++|+.|..+.+-.   
T Consensus       249 l~L---av~~~~d~vfsaGvd~~ii--~~~~~~~~~~wv~~---~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  249 LAL---AVADNEDRVFSAGVDPKII--QYSLTTNKSEWVIN---SRRDLHAHDVRSMAVIENALISGGRDFTLAICSSRE  320 (691)
T ss_pred             eEE---EEcCCCCeEEEccCCCceE--EEEecCCccceeee---ccccCCcccceeeeeecceEEecceeeEEEEccccc
Confidence            999   9999999999999999988  77666543211110   0111111111111    3444444444443322   


Q ss_pred             ---------------------------------------CCCC----ceeeeeecccccccCCCeEEEEEcCCCCEEEEE
Q psy10942        302 ---------------------------------------TTGG----LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG  338 (537)
Q Consensus       302 ---------------------------------------~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  338 (537)
                                                             +.+.    +.....+..........|.+.+.+|+|++++.+
T Consensus       321 ~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~s  400 (691)
T KOG2048|consen  321 FKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIS  400 (691)
T ss_pred             cCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEe
Confidence                                                   2111    000001011112234568999999999999987


Q ss_pred             eCCCcEEEEEccCCceeeEEEEe---------------cCCCCEEEEEc-CCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        339 SLDKTVKVWSTTGGLKLLNVLRG---------------HKKGTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       339 ~~d~~i~i~d~~~~~~~~~~~~~---------------~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      .- ...++|.+.... .+.....               ..+++.++.++ ....+..+++.+.........         
T Consensus       401 t~-~~~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~---------  469 (691)
T KOG2048|consen  401 TV-SRTKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSI---------  469 (691)
T ss_pred             ec-cceEEEEeccCc-ceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhcc---------
Confidence            64 457888877322 2222211               11233344343 555666666554322111110         


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLW  481 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vw  481 (537)
                       .++   .-...|..+..||+|++||+.+..|.|.+|++++++...........|+.++|+| +.+.|+.+..++.+.-|
T Consensus       470 -~~~---~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~ef  545 (691)
T KOG2048|consen  470 -QSQ---AKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEF  545 (691)
T ss_pred             -ccc---cCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCCeEEEE
Confidence             111   1112789999999999999999999999999998766554434557899999995 67789999999999999


Q ss_pred             ECCCC
Q psy10942        482 SIKTS  486 (537)
Q Consensus       482 d~~~~  486 (537)
                      |++..
T Consensus       546 di~~~  550 (691)
T KOG2048|consen  546 DIEAR  550 (691)
T ss_pred             ecchh
Confidence            99543

>KOG0308|consensus

Probab=99.95  E-value=2e-27  Score=216.25  Aligned_cols=350  Identities=15%  Similarity=0.175  Sum_probs=246.3

Q ss_pred             eeeeccCCcceEEEecCcceEEEEEcCccce------eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ------LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      +..++ +++++|+|||+||.|++|+...-..      +..+. |..-+..+  +...        +++.+++++.|-+|+
T Consensus        30 Lq~da-~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDi--iL~~--------~~~tlIS~SsDtTVK   98 (735)
T KOG0308|consen   30 LQLDA-PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDI--ILCG--------NGKTLISASSDTTVK   98 (735)
T ss_pred             ccccC-CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhH--Hhhc--------CCCceEEecCCceEE
Confidence            44443 6777999999999999999865332      22333 33334444  3333        556899999999999


Q ss_pred             eeeccce--ehhhhcCCC-cceEEEEE-eccccEEEEEeCCceEEEEecccccCcccccccccceeEEee-cchhhhhhh
Q psy10942         81 YYETSAV--KELYQHGLS-SPLVRIVR-SSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV-GFSDEILDI  155 (537)
Q Consensus        81 ~wd~~~~--~~~~~~~~~-~~v~~~~~-s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~  155 (537)
                      +|+...+  -+..++..| +.|.|+++ .++..++|+|+-|+.|.+||++++........... ....+. |+...|+++
T Consensus        99 ~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~-t~~sl~sG~k~siYSL  177 (735)
T KOG0308|consen   99 VWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNV-TVNSLGSGPKDSIYSL  177 (735)
T ss_pred             EeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccc-ccccCCCCCccceeee
Confidence            9999887  577777766 79999999 88889999999999999999998533111111111 122233 788899999


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~  233 (537)
                      +.+ +.+..++.++..++    +                 ++||.       ++.+..  +.     ||  ...|.++  
T Consensus       178 A~N-~t~t~ivsGgtek~----l-----------------r~wDp-------rt~~kimkLr-----GH--TdNVr~l--  219 (735)
T KOG0308|consen  178 AMN-QTGTIIVSGGTEKD----L-----------------RLWDP-------RTCKKIMKLR-----GH--TDNVRVL--  219 (735)
T ss_pred             ecC-CcceEEEecCcccc----e-----------------EEecc-------ccccceeeee-----cc--ccceEEE--
Confidence            998 66667777766666    9                 99999       887776  77     99  9999999  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                       ..++||+.+++++.||+|+  +|++..    .+|                                            .
T Consensus       220 -l~~dDGt~~ls~sSDgtIr--lWdLgq----QrC--------------------------------------------l  248 (735)
T KOG0308|consen  220 -LVNDDGTRLLSASSDGTIR--LWDLGQ----QRC--------------------------------------------L  248 (735)
T ss_pred             -EEcCCCCeEeecCCCceEE--eeeccc----cce--------------------------------------------e
Confidence             9999999999999999999  998877    333                                            2


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE---------ecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR---------GHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                      .++..|...|.++..+|+-..+++|+.||.|..=|++...+.....+         .+...+.+-+++.|+.|+-|-..-
T Consensus       249 ~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~  328 (735)
T KOG0308|consen  249 ATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP  328 (735)
T ss_pred             eeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCcc
Confidence            23446777799999999999999999999999999985333322222         122234446677777777776432


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                      .                                ..+++.+.+.. -+.|.....++... .+-..+.| ..+|...+.-.
T Consensus       329 ~--------------------------------~~l~~s~~~~~-~~T~~~~~~~~~~~-tp~~vi~G-g~ai~k~~mL~  373 (735)
T KOG0308|consen  329 D--------------------------------IALSVSGDLDF-FSTDSNNHSCDLTN-TPDSVIPG-GAAIKKHAMLN  373 (735)
T ss_pred             c--------------------------------cccccCCCCCc-ccccCCCccccccC-CCceeccC-chhhhhhhhhc
Confidence            1                                23444444444 23344444444322 22333333 23466666777


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      |.++++|-...|.+.+||+-..+.+..+.
T Consensus       374 dkRhVlTkDa~gnv~lwDIl~~~~~~d~g  402 (735)
T KOG0308|consen  374 DKRHVLTKDAKGNVALWDILACVKVEDFG  402 (735)
T ss_pred             CcceEeeecCCCCEEEEEeeeeeehhhcc
Confidence            88999999999999999997776665553

>KOG0274|consensus

Probab=99.95  E-value=1.5e-26  Score=220.55  Aligned_cols=262  Identities=28%  Similarity=0.359  Sum_probs=215.9

Q ss_pred             chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCC
Q psy10942        148 FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDE  224 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~  224 (537)
                      +...+.+..|.   +++++.++.+..    |                 ++||.       .++...   +.     ||  
T Consensus       207 ~~~~~~~~q~~---~~~~~~~s~~~t----l-----------------~~~~~-------~~~~~i~~~l~-----GH--  248 (537)
T KOG0274|consen  207 DDHVVLCLQLH---DGFFKSGSDDST----L-----------------HLWDL-------NNGYLILTRLV-----GH--  248 (537)
T ss_pred             Ccchhhhheee---cCeEEecCCCce----e-----------------EEeec-------ccceEEEeecc-----CC--
Confidence            45567888776   667777777776    8                 99999       766665   56     99  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCCCeEE
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLDKTVK  298 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d~~i~  298 (537)
                      .+.|.++   ++..-+.++++|+.|.+++  +||..+    ..|     ...+.+|..  .++    ..+++|+.|.+|+
T Consensus       249 ~g~V~~l---~~~~~~~~lvsgS~D~t~r--vWd~~s----g~C-----~~~l~gh~stv~~~~~~~~~~~sgs~D~tVk  314 (537)
T KOG0274|consen  249 FGGVWGL---AFPSGGDKLVSGSTDKTER--VWDCST----GEC-----THSLQGHTSSVRCLTIDPFLLVSGSRDNTVK  314 (537)
T ss_pred             CCCceeE---EEecCCCEEEEEecCCcEE--eEecCC----CcE-----EEEecCCCceEEEEEccCceEeeccCCceEE
Confidence            9999999   8887788999999999999  999888    455     667777776  222    5677788999999


Q ss_pred             EEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942        299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       299 i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  378 (537)
                      +|+++++..     ...+.+|.++|+++..+  +.++++|+.|++|++||+. ..+++..+.+|..              
T Consensus       315 VW~v~n~~~-----l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~-~~~cl~sl~gH~~--------------  372 (537)
T KOG0274|consen  315 VWDVTNGAC-----LNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR-TGKCLKSLSGHTG--------------  372 (537)
T ss_pred             EEeccCcce-----EEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh-hceeeeeecCCcc--------------
Confidence            999998876     44456699999999987  7789999999999999988 6666666666654              


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcce
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-VCLKSLEGHDASV  457 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v  457 (537)
                                                         .|.++.+.+. ..+++|+.|+.|++||+.+. +++..+.+|.+-+
T Consensus       373 -----------------------------------~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v  416 (537)
T KOG0274|consen  373 -----------------------------------RVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV  416 (537)
T ss_pred             -----------------------------------eEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccc
Confidence                                               6677766665 78999999999999999999 9999999999988


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC-CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ..+.+  .+++|++++.|++|++||..++++++.+.+ |...+           +.+   ++.  ...+++++.||++++
T Consensus       417 ~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v-----------~~l---~~~--~~~il~s~~~~~~~l  478 (537)
T KOG0274|consen  417 SSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGV-----------SAL---ALG--KEEILCSSDDGSVKL  478 (537)
T ss_pred             ccccc--ccceeEeccccccEEEeecccCceeeeeccCCcccE-----------EEe---ecC--cceEEEEecCCeeEE
Confidence            77665  567999999999999999999999999998 56777           666   554  567888999999999


Q ss_pred             C
Q psy10942        537 Y  537 (537)
Q Consensus       537 W  537 (537)
                      |
T Consensus       479 ~  479 (537)
T KOG0274|consen  479 W  479 (537)
T ss_pred             E
Confidence            8

>KOG0274|consensus

Probab=99.95  E-value=1.1e-26  Score=221.51  Aligned_cols=274  Identities=27%  Similarity=0.369  Sum_probs=225.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE-eecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ-FVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ..+.+..|.  +.++++++.+++|.+||..+           ...+.. +.||.+.|.+++|. ..+..|++++.|..  
T Consensus       209 ~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~-----------~~~i~~~l~GH~g~V~~l~~~-~~~~~lvsgS~D~t--  272 (537)
T KOG0274|consen  209 HVVLCLQLH--DGFFKSGSDDSTLHLWDLNN-----------GYLILTRLVGHFGGVWGLAFP-SGGDKLVSGSTDKT--  272 (537)
T ss_pred             chhhhheee--cCeEEecCCCceeEEeeccc-----------ceEEEeeccCCCCCceeEEEe-cCCCEEEEEecCCc--
Confidence            467777777  56788999999999999998           555555 99999999999997 57888899998888  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                        +                 ++||.       .+++|.  +.     +|  ...|.++     +-...++++|+.|.+++
T Consensus       273 --~-----------------rvWd~-------~sg~C~~~l~-----gh--~stv~~~-----~~~~~~~~sgs~D~tVk  314 (537)
T KOG0274|consen  273 --E-----------------RVWDC-------STGECTHSLQ-----GH--TSSVRCL-----TIDPFLLVSGSRDNTVK  314 (537)
T ss_pred             --E-----------------EeEec-------CCCcEEEEec-----CC--CceEEEE-----EccCceEeeccCCceEE
Confidence              9                 99999       999999  88     99  9999999     34556888899999999


Q ss_pred             eccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                        +|++.++    .+     +..+.+|..  .++    .++++|+.|++|++||+.+.+.     ...+.+|...|.++.
T Consensus       315 --VW~v~n~----~~-----l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~c-----l~sl~gH~~~V~sl~  378 (537)
T KOG0274|consen  315 --VWDVTNG----AC-----LNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKC-----LKSLSGHTGRVYSLI  378 (537)
T ss_pred             --EEeccCc----ce-----EEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhcee-----eeeecCCcceEEEEE
Confidence              9999974    33     444555554  333    7999999999999999998876     566789999999998


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCc-eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGL-KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD  406 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  406 (537)
                      +.+. ..+++|+.|+.|++||++ .. +++..+..|..                                -         
T Consensus       379 ~~~~-~~~~Sgs~D~~IkvWdl~-~~~~c~~tl~~h~~--------------------------------~---------  415 (537)
T KOG0274|consen  379 VDSE-NRLLSGSLDTTIKVWDLR-TKRKCIHTLQGHTS--------------------------------L---------  415 (537)
T ss_pred             ecCc-ceEEeeeeccceEeecCC-chhhhhhhhcCCcc--------------------------------c---------
Confidence            8765 899999999999999999 44 55555555543                                1         


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                              +  -.+...+++|++++.|++|++||..+++++..+.+ |...|..+++.  ...+++++.||.+++||+++
T Consensus       416 --------v--~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~  483 (537)
T KOG0274|consen  416 --------V--SSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRS  483 (537)
T ss_pred             --------c--cccccccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEeccc
Confidence                    1  11223467899999999999999999999999998 67888888876  45788999999999999999


Q ss_pred             CeeEEEecCC
Q psy10942        486 STCVSTFDKH  495 (537)
Q Consensus       486 ~~~~~~~~~~  495 (537)
                      +++.+.+-.+
T Consensus       484 ~~~~~~l~~~  493 (537)
T KOG0274|consen  484 GTLIRTLLST  493 (537)
T ss_pred             Cchhhhhhhc
Confidence            9988876433

>KOG0289|consensus

Probab=99.94  E-value=5.6e-26  Score=197.05  Aligned_cols=270  Identities=16%  Similarity=0.170  Sum_probs=223.1

Q ss_pred             cEEEEEeCccceEEeeeccceehhhhcCCCc-ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         67 KTFVLAGGEKSLLHYYETSAVKELYQHGLSS-PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        67 ~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      ...+++||.|..+.++|..+++.+..+++|. .|+.+.|+|+...+++++.|..|+||....           .......
T Consensus       231 ~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~-----------~s~~~~~  299 (506)
T KOG0289|consen  231 SSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL-----------SSEPTSS  299 (506)
T ss_pred             CCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccc-----------ccCcccc
Confidence            4689999999999999999999999999884 999999999999999999999999999988           5566778


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCC-
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRD-  223 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~-  223 (537)
                      ..|..+|+.+..+ +.+.+++.+++++.    .                 .+.|+       +++.+. ..     .+. 
T Consensus       300 ~~h~~~V~~ls~h-~tgeYllsAs~d~~----w-----------------~Fsd~-------~~g~~lt~v-----s~~~  345 (506)
T KOG0289|consen  300 RPHEEPVTGLSLH-PTGEYLLSASNDGT----W-----------------AFSDI-------SSGSQLTVV-----SDET  345 (506)
T ss_pred             ccccccceeeeec-cCCcEEEEecCCce----E-----------------EEEEc-------cCCcEEEEE-----eecc
Confidence            8899999999999 78899999998877    6                 66677       777776 22     220 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                      ..-.+++.   +|+|||..|.+|..|+.++  +||+..+                                         
T Consensus       346 s~v~~ts~---~fHpDgLifgtgt~d~~vk--iwdlks~-----------------------------------------  379 (506)
T KOG0289|consen  346 SDVEYTSA---AFHPDGLIFGTGTPDGVVK--IWDLKSQ-----------------------------------------  379 (506)
T ss_pred             ccceeEEe---eEcCCceEEeccCCCceEE--EEEcCCc-----------------------------------------
Confidence            03458899   9999999999999888888  8887763                                         


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                        ..     ...+.+|.++|..++|+.+|-+|++++.|+.|++||++ ..+...++.....                   
T Consensus       380 --~~-----~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLR-Kl~n~kt~~l~~~-------------------  432 (506)
T KOG0289|consen  380 --TN-----VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLR-KLKNFKTIQLDEK-------------------  432 (506)
T ss_pred             --cc-----cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEeh-hhcccceeecccc-------------------
Confidence              11     33457899999999999999999999999999999999 4444444432211                   


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEEC--CCceeeeEeecCCcceEEEE
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCL--TDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~  461 (537)
                        +                           ++.++.|++.|.+|+.++.|=.|++++-  +++..+..+..|.+..+.+.
T Consensus       433 --~---------------------------~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~  483 (506)
T KOG0289|consen  433 --K---------------------------EVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVR  483 (506)
T ss_pred             --c---------------------------cceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceee
Confidence              0                           6888999999999999977656666652  25778888888999999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEEC
Q psy10942        462 FINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       462 ~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      |....+++++++.|..++++.+
T Consensus       484 Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  484 FGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             ecccceEEeeccchhheEEeec
Confidence            9999999999999999988764

>KOG0641|consensus

Probab=99.94  E-value=1.2e-24  Score=172.76  Aligned_cols=300  Identities=16%  Similarity=0.215  Sum_probs=217.4

Q ss_pred             eeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc------ceeh---------hhhcCCC-cceEEE
Q psy10942         39 LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS------AVKE---------LYQHGLS-SPLVRI  102 (537)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~------~~~~---------~~~~~~~-~~v~~~  102 (537)
                      +..+.....+.++  .+.|        .+.+.++++...++++-...      .+.+         ..+-++| +.|.|.
T Consensus        26 i~~l~dsqairav--~fhp--------~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~   95 (350)
T KOG0641|consen   26 INILEDSQAIRAV--AFHP--------AGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCT   95 (350)
T ss_pred             EEEecchhheeeE--EecC--------CCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEE
Confidence            3344455666777  5688        56788888888888876432      2111         1122233 699999


Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc--CCCccEEEeeeccccCCcccc
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG--EEDSHIVVASNEYLNGGDLSG  180 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~~~~i~~  180 (537)
                      +|||+|++||+|++|.+|++.-.+..+...      ...--.+.-|.+.|..++|..  ..+..++...+.++  ..|  
T Consensus        96 ~ws~~geliatgsndk~ik~l~fn~dt~~~------~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd--c~i--  165 (350)
T KOG0641|consen   96 AWSPCGELIATGSNDKTIKVLPFNADTCNA------TGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD--CKI--  165 (350)
T ss_pred             EecCccCeEEecCCCceEEEEecccccccc------cCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc--ceE--
Confidence            999999999999999999998766532211      112235677899999999972  23344544444455  345  


Q ss_pred             eeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccc
Q psy10942        181 LVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEK  258 (537)
Q Consensus       181 ~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~  258 (537)
                                     .+-|.       ..++..  +.     ||  .+-|.++    ++-+|-.+++|+.|.+|+  +||
T Consensus       166 ---------------y~tdc-------~~g~~~~a~s-----gh--tghilal----yswn~~m~~sgsqdktir--fwd  210 (350)
T KOG0641|consen  166 ---------------YITDC-------GRGQGFHALS-----GH--TGHILAL----YSWNGAMFASGSQDKTIR--FWD  210 (350)
T ss_pred             ---------------EEeec-------CCCCcceeec-----CC--cccEEEE----EEecCcEEEccCCCceEE--EEe
Confidence                           55566       555544  77     99  9999998    777888999999999999  999


Q ss_pred             ccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE
Q psy10942        259 RKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG  338 (537)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  338 (537)
                      ++-..                                .+...+..-..         -.-..+.|.+++..|.|++|++|
T Consensus       211 lrv~~--------------------------------~v~~l~~~~~~---------~glessavaav~vdpsgrll~sg  249 (350)
T KOG0641|consen  211 LRVNS--------------------------------CVNTLDNDFHD---------GGLESSAVAAVAVDPSGRLLASG  249 (350)
T ss_pred             eeccc--------------------------------eeeeccCcccC---------CCcccceeEEEEECCCcceeeec
Confidence            87621                                12222211100         00124678999999999999999


Q ss_pred             eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942        339 SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV  418 (537)
Q Consensus       339 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~  418 (537)
                      ..|....+||++ ++.+++.+..|..                                                 .|.++
T Consensus       250 ~~dssc~lydir-g~r~iq~f~phsa-------------------------------------------------dir~v  279 (350)
T KOG0641|consen  250 HADSSCMLYDIR-GGRMIQRFHPHSA-------------------------------------------------DIRCV  279 (350)
T ss_pred             cCCCceEEEEee-CCceeeeeCCCcc-------------------------------------------------ceeEE
Confidence            999999999999 7777776666554                                                 88899


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCC----ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        419 NFSPLDRILISSSGDATIKLWCLTD----YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       419 ~~s~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      .|||...|+++++.|..|++-|+..    .-++.....|...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus       280 rfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  280 RFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            9999999999999999999999864    23445556799999999999998889999999999999763

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=5.5e-25  Score=209.89  Aligned_cols=235  Identities=17%  Similarity=0.213  Sum_probs=177.2

Q ss_pred             CcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        235 KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      ..++++..+++++.+....  .|+...+                                 ...++..+.++....  ..
T Consensus        27 ~~~~d~~~~~~~n~~~~a~--~w~~~gg---------------------------------~~v~~~~~~G~~~~~--~~   69 (493)
T PTZ00421         27 TALWDCSNTIACNDRFIAV--PWQQLGS---------------------------------TAVLKHTDYGKLASN--PP   69 (493)
T ss_pred             cccCCCCCcEeECCceEEE--EEecCCc---------------------------------eEEeeccccccCCCC--Cc
Confidence            5667777777777777777  7765541                                 122222222321110  22


Q ss_pred             cccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCc------ee----------eEEEEecCC-CCEEEEEcCCCc
Q psy10942        315 HKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGL------KL----------LNVLRGHKK-GTQIVSTGADGL  376 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~------~~----------~~~~~~~~~-~~~l~~~~~d~~  376 (537)
                      .+.+|.+.|.+++|+| ++++|++++.|++|++||+....      .+          +..+..++. +.++++++.|++
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt  149 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV  149 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence            3578999999999999 88999999999999999987321      12          333445555 468999999999


Q ss_pred             EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc
Q psy10942        377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS  456 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  456 (537)
                      |++||+.+++.+..+..|..                 .|.+++|+|++++|++++.|+.|++||+++++.+..+.+|.+.
T Consensus       150 VrIWDl~tg~~~~~l~~h~~-----------------~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~  212 (493)
T PTZ00421        150 VNVWDVERGKAVEVIKCHSD-----------------QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA  212 (493)
T ss_pred             EEEEECCCCeEEEEEcCCCC-----------------ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC
Confidence            99999999998888887765                 7888899999999999999999999999999999999999765


Q ss_pred             -eEEEEEecCCCEEEEEe----CCCcEEEEECCCCe-eEEEecCCc-cceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        457 -VLRCHFINKGTQIVSTG----ADGLLKLWSIKTST-CVSTFDKHA-LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       457 -v~~~~~s~~~~~l~s~~----~dg~v~vwd~~~~~-~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                       +..+.|.+++..+++++    .|+.|++||+++.. .+.....+. ..+           ...   .|++++++|++++
T Consensus       213 ~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~-----------~~~---~~d~d~~~L~lgg  278 (493)
T PTZ00421        213 KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSAL-----------FIP---FFDEDTNLLYIGS  278 (493)
T ss_pred             cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCce-----------EEE---EEcCCCCEEEEEE
Confidence             45778999888887765    47899999998654 333333232 223           344   7899999999987


Q ss_pred             -CCCCEEeC
Q psy10942        530 -WSPQVVVY  537 (537)
Q Consensus       530 -~dg~i~vW  537 (537)
                       .|+.|++|
T Consensus       279 kgDg~Iriw  287 (493)
T PTZ00421        279 KGEGNIRCF  287 (493)
T ss_pred             eCCCeEEEE
Confidence             59999998

>KOG0647|consensus

Probab=99.94  E-value=4.2e-25  Score=182.94  Aligned_cols=260  Identities=16%  Similarity=0.178  Sum_probs=203.7

Q ss_pred             cCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCC-ccccc--ccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        225 LKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYH-FPLFG--IFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       225 ~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~-~~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      .+.|.++   +||| ...+++.++.|+++|  +|+++... ...+.  ....|+....+..++  ..+++|+.|+.+++|
T Consensus        27 ~DsIS~l---~FSP~~~~~~~A~SWD~tVR--~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg--skVf~g~~Dk~~k~w   99 (347)
T KOG0647|consen   27 EDSISAL---AFSPQADNLLAAGSWDGTVR--IWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG--SKVFSGGCDKQAKLW   99 (347)
T ss_pred             ccchhee---EeccccCceEEecccCCceE--EEEEecCCcccchhhhccCCCeEEEEEccCC--ceEEeeccCCceEEE
Confidence            7889999   9999 455666999999999  99998842 11111  111122222222222  689999999999999


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEccCCceeeEEEEecCC-------CCEEEEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK--LLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-------GTQIVST  371 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~l~~~  371 (537)
                      |+.+++      ......|.++|.++.|-+...  .|++|+.|.+|+.||++ ...++.++.....       ...++.+
T Consensus       100 DL~S~Q------~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R-~~~pv~t~~LPeRvYa~Dv~~pm~vVa  172 (347)
T KOG0647|consen  100 DLASGQ------VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR-SSNPVATLQLPERVYAADVLYPMAVVA  172 (347)
T ss_pred             EccCCC------eeeeeecccceeEEEEecCCCcceeEecccccceeecccC-CCCeeeeeeccceeeehhccCceeEEE
Confidence            999996      456678999999999988665  89999999999999999 6666666655443       5678899


Q ss_pred             cCCCcEEEEECCCCeeeeee-ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc--eeee
Q psy10942        372 GADGLLKLWSIKTSTCVSTF-DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY--VCLK  448 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~~~~  448 (537)
                      ..+..|.+|+++++...... ......                .+.+++..+|....|.|+-+|.+.+..+..+  +.-.
T Consensus       173 ta~r~i~vynL~n~~te~k~~~SpLk~----------------Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nF  236 (347)
T KOG0647|consen  173 TAERHIAVYNLENPPTEFKRIESPLKW----------------QTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNF  236 (347)
T ss_pred             ecCCcEEEEEcCCCcchhhhhcCcccc----------------eeeEEEEEecCCceEeeeecceEEEEecCCCCccCce
Confidence            99999999999876543222 111110                6778888888888899999999999988876  5556


Q ss_pred             EeecCCc---------ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeee
Q psy10942        449 SLEGHDA---------SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCS  519 (537)
Q Consensus       449 ~~~~~~~---------~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  519 (537)
                      +++.|..         .|++++|+|....|+|++.||++.+||-+....+...+.|..+|           ++.   +|+
T Consensus       237 tFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpI-----------tcc---~fn  302 (347)
T KOG0647|consen  237 TFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPI-----------TCC---SFN  302 (347)
T ss_pred             eEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCcc-----------cee---Eec
Confidence            7777763         47899999999999999999999999999888889999999999           888   999


Q ss_pred             cCCCEEEEE
Q psy10942        520 RNSDCEYRG  528 (537)
Q Consensus       520 ~~~~~l~s~  528 (537)
                      .+|.++|-+
T Consensus       303 ~~G~ifaYA  311 (347)
T KOG0647|consen  303 RNGSIFAYA  311 (347)
T ss_pred             CCCCEEEEE
Confidence            999988754

>KOG0973|consensus

Probab=99.94  E-value=8.8e-26  Score=218.08  Aligned_cols=308  Identities=13%  Similarity=0.076  Sum_probs=218.8

Q ss_pred             CcEEEEEeC--ccceEEeeeccce------------ehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccC
Q psy10942         66 GKTFVLAGG--EKSLLHYYETSAV------------KELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETG  130 (537)
Q Consensus        66 ~~~~~~~~~--~~~~i~~wd~~~~------------~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~  130 (537)
                      ++..++++|  .|+.+++|+.+.-            +.+.++. +.+.|.|+.|+|||++||+|+.|+.|.||.......
T Consensus        24 dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~  103 (942)
T KOG0973|consen   24 DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGS  103 (942)
T ss_pred             CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCC
Confidence            778999999  8999999987531            2233333 237999999999999999999999999999883100


Q ss_pred             -------cccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942        131 -------LEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE  203 (537)
Q Consensus       131 -------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~  203 (537)
                             .........+.+..+.+|...|..++|+ |++.++++++.+..    |                 .+||.   
T Consensus       104 ~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws-p~~~~lvS~s~Dns----V-----------------iiwn~---  158 (942)
T KOG0973|consen  104 GTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS-PDDSLLVSVSLDNS----V-----------------IIWNA---  158 (942)
T ss_pred             cccccccccccccceeeEEEEEecCCCccceeccC-CCccEEEEecccce----E-----------------EEEcc---
Confidence                   1123333456788999999999999999 69999999999988    9                 99999   


Q ss_pred             hhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942        204 AKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT  281 (537)
Q Consensus       204 ~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~  281 (537)
                          .+.++.  +.     +|  ...|..+   .|.|-|+|||+-+.|++++  +|++.+-    .+     ...+    
T Consensus       159 ----~tF~~~~vl~-----~H--~s~VKGv---s~DP~Gky~ASqsdDrtik--vwrt~dw----~i-----~k~I----  209 (942)
T KOG0973|consen  159 ----KTFELLKVLR-----GH--QSLVKGV---SWDPIGKYFASQSDDRTLK--VWRTSDW----GI-----EKSI----  209 (942)
T ss_pred             ----ccceeeeeee-----cc--cccccce---EECCccCeeeeecCCceEE--EEEcccc----ee-----eEee----
Confidence                888766  88     99  9999999   9999999999999999999  9997662    11     0000    


Q ss_pred             CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe
Q psy10942        282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG  361 (537)
Q Consensus       282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  361 (537)
                                         +-...+          ..-......+.|||||++|++...=+        .+..       
T Consensus       210 -------------------t~pf~~----------~~~~T~f~RlSWSPDG~~las~nA~n--------~~~~-------  245 (942)
T KOG0973|consen  210 -------------------TKPFEE----------SPLTTFFLRLSWSPDGHHLASPNAVN--------GGKS-------  245 (942)
T ss_pred             -------------------ccchhh----------CCCcceeeecccCCCcCeecchhhcc--------CCcc-------
Confidence                               000000          01123467899999999999864311        1111       


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC--CEEEEEeCCCcEEEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD--RILISSSGDATIKLW  439 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~i~  439 (537)
                                    ++.|.+-.+.+.-..+-+|..++..+.|+|.--.--.  -....-.++.  ..+|+|+.|++|.||
T Consensus       246 --------------~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~--~ng~~~~~~~~y~i~AvgSqDrSlSVW  309 (942)
T KOG0973|consen  246 --------------TIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNN--KNGTSTQPNCYYCIAAVGSQDRSLSVW  309 (942)
T ss_pred             --------------eeEEEecCCceeeeeeecCCCceEEEEeChHHhcccc--ccCCccCCCcceEEEEEecCCccEEEE
Confidence                          1222233344455566677776666666663100000  0000000110  268899999999999


Q ss_pred             ECCCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        440 CLTDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       440 d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      .....+++..... ....|.+++|+|||..|+.+|.||+|.+..++..+
T Consensus       310 ~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  310 NTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             ecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence            9988777765543 35679999999999999999999999999987643

>PTZ00420 coronin; Provisional

Probab=99.94  E-value=2.5e-24  Score=206.18  Aligned_cols=210  Identities=18%  Similarity=0.219  Sum_probs=162.3

Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCc----------------
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGL----------------  353 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~----------------  353 (537)
                      |+.++.|++|+......     ...+.+|.+.|.+++|+|+ +++|++|+.|+.|++||+....                
T Consensus        50 GG~~gvI~L~~~~r~~~-----v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH  124 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPP-----VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH  124 (568)
T ss_pred             CCceeEEEeeecCCCce-----EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence            44568899999876543     3456799999999999996 7899999999999999987321                


Q ss_pred             -eeeEEEEecCCCCE-EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942        354 -KLLNVLRGHKKGTQ-IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS  431 (537)
Q Consensus       354 -~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  431 (537)
                       ..+..+..|+.+.. +++++.|++|++||+++++....+..+ .                 .|.+++|+|+|++|++++
T Consensus       125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~-~-----------------~V~SlswspdG~lLat~s  186 (568)
T PTZ00420        125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP-K-----------------KLSSLKWNIKGNLLSGTC  186 (568)
T ss_pred             CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC-C-----------------cEEEEEECCCCCEEEEEe
Confidence             12334455565654 578999999999999998876655422 2                 688999999999999999


Q ss_pred             CCCcEEEEECCCceeeeEeecCCcceEEE-----EEecCCCEEEEEeCCC----cEEEEECCC-CeeEEEecC--Cccce
Q psy10942        432 GDATIKLWCLTDYVCLKSLEGHDASVLRC-----HFINKGTQIVSTGADG----LLKLWSIKT-STCVSTFDK--HALKI  499 (537)
Q Consensus       432 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-----~~s~~~~~l~s~~~dg----~v~vwd~~~-~~~~~~~~~--~~~~i  499 (537)
                      .|+.|++||+++++.+..+.+|.+.+...     .|++++.+|++++.|+    .|+|||+++ ++++..+..  +.+.+
T Consensus       187 ~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L  266 (568)
T PTZ00420        187 VGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPL  266 (568)
T ss_pred             cCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccce
Confidence            99999999999999999999998765433     3458889999988774    799999985 555555432  22222


Q ss_pred             eccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        500 RNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                 ...   ...++|.++++|+.|+.|++|
T Consensus       267 -----------~p~---~D~~tg~l~lsGkGD~tIr~~  290 (568)
T PTZ00420        267 -----------IPH---YDESTGLIYLIGKGDGNCRYY  290 (568)
T ss_pred             -----------EEe---eeCCCCCEEEEEECCCeEEEE
Confidence                       223   345568899999999999998

>KOG1036|consensus

Probab=99.94  E-value=2e-25  Score=185.57  Aligned_cols=277  Identities=14%  Similarity=0.170  Sum_probs=211.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.|.+|.|+|.++.|++++.||++++||+..           ..+...+ .|..++.+++|.+  ...+++++.++.   
T Consensus        14 d~IS~v~f~~~~~~LLvssWDgslrlYdv~~-----------~~l~~~~-~~~~plL~c~F~d--~~~~~~G~~dg~---   76 (323)
T KOG1036|consen   14 DGISSVKFSPSSSDLLVSSWDGSLRLYDVPA-----------NSLKLKF-KHGAPLLDCAFAD--ESTIVTGGLDGQ---   76 (323)
T ss_pred             hceeeEEEcCcCCcEEEEeccCcEEEEeccc-----------hhhhhhe-ecCCceeeeeccC--CceEEEeccCce---
Confidence            6899999999999999999999999999998           4444344 4888899999973  667778887777   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       |                 +.+|+       +++... +.     .|  ..+|.|+   .+++....+++|+.|++|+  
T Consensus        77 -v-----------------r~~Dl-------n~~~~~~ig-----th--~~~i~ci---~~~~~~~~vIsgsWD~~ik--  119 (323)
T KOG1036|consen   77 -V-----------------RRYDL-------NTGNEDQIG-----TH--DEGIRCI---EYSYEVGCVISGSWDKTIK--  119 (323)
T ss_pred             -E-----------------EEEEe-------cCCcceeec-----cC--CCceEEE---EeeccCCeEEEcccCccEE--
Confidence             9                 99999       887776 77     89  9999999   9999889999999999999  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      +||.+..........  ....+......  +.|+.|+.+..+.+||+++.......   ......-.++|+++.|++.-+
T Consensus       120 ~wD~R~~~~~~~~d~--~kkVy~~~v~g--~~LvVg~~~r~v~iyDLRn~~~~~q~---reS~lkyqtR~v~~~pn~eGy  192 (323)
T KOG1036|consen  120 FWDPRNKVVVGTFDQ--GKKVYCMDVSG--NRLVVGTSDRKVLIYDLRNLDEPFQR---RESSLKYQTRCVALVPNGEGY  192 (323)
T ss_pred             EEecccccccccccc--CceEEEEeccC--CEEEEeecCceEEEEEcccccchhhh---ccccceeEEEEEEEecCCCce
Confidence            999986221111100  00000000001  68999999999999999987654321   122334568999999988889


Q ss_pred             EEEeCCCcEEEEEccCC---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        336 ASGSLDKTVKVWSTTGG---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      ++++-||.|.+=.+...   ......++.|...       .+++                                .+ .
T Consensus       193 ~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~-------~~~~--------------------------------~~-~  232 (323)
T KOG1036|consen  193 VVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLS-------EKDT--------------------------------EI-I  232 (323)
T ss_pred             EEEeecceEEEEccCCchHHhhhceeEEeeecc-------cCCc--------------------------------eE-E
Confidence            99999999988666522   1223344444320       0111                                01 1


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                      -+|++++|+|-...||+|+.||.|.+||+.+.+.+..+......|.+++|+.+|..||+++.
T Consensus       233 yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  233 YPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            18999999999999999999999999999999999999888788999999999999999875

>KOG0300|consensus

Probab=99.94  E-value=1.4e-25  Score=186.96  Aligned_cols=313  Identities=16%  Similarity=0.208  Sum_probs=227.7

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      .++.+.+.||.+.|..++-. .....+.+++.+..    -                 +||.+       +++.|+  +. 
T Consensus       138 ~~lvre~~GHkDGiW~Vaa~-~tqpi~gtASADhT----A-----------------~iWs~-------Esg~CL~~Y~-  187 (481)
T KOG0300|consen  138 FRLVRELEGHKDGIWHVAAD-STQPICGTASADHT----A-----------------RIWSL-------ESGACLATYT-  187 (481)
T ss_pred             Eeehhhhcccccceeeehhh-cCCcceeecccccc----e-----------------eEEee-------ccccceeeec-
Confidence            46677899999999998876 44455556666666    7                 89999       999999  77 


Q ss_pred             cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                          ||  .+.|.++   .|++.+.++++++.|++..  ||...-.-....      ...-..|....  .+-  ..|..
T Consensus       188 ----GH--~GSVNsi---kfh~s~~L~lTaSGD~taH--IW~~av~~~vP~------~~a~~~hSsEe--E~e--~sDe~  246 (481)
T KOG0300|consen  188 ----GH--TGSVNSI---KFHNSGLLLLTASGDETAH--IWKAAVNWEVPS------NNAPSDHSSEE--EEE--HSDEH  246 (481)
T ss_pred             ----cc--ccceeeE---EeccccceEEEccCCcchH--HHHHhhcCcCCC------CCCCCCCCchh--hhh--ccccc
Confidence                99  9999999   9999999999999999999  998433100000      00111111100  000  00111


Q ss_pred             EEEEE--CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC----------C
Q psy10942        297 VKVWS--TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------K  364 (537)
Q Consensus       297 i~i~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~  364 (537)
                      .+--|  ........+.....+.+|.+.|.+..|...|+.+++++.|.+..+||++ .+.++..+.+|.          .
T Consensus       247 ~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVE-tge~v~~LtGHd~ELtHcstHpt  325 (481)
T KOG0300|consen  247 NRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVE-TGEVVNILTGHDSELTHCSTHPT  325 (481)
T ss_pred             ccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeec-cCceeccccCcchhccccccCCc
Confidence            11111  0111112222356678999999999999999999999999999999999 778887777664          4


Q ss_pred             CCEEEEEcCCCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        365 GTQIVSTGADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                      ..++++.+.|.+.++||++.. ..+..|++|...+                 ++..|.-+. .+++|+.|.+|++||+++
T Consensus       326 QrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtV-----------------TS~vF~~dd-~vVSgSDDrTvKvWdLrN  387 (481)
T KOG0300|consen  326 QRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTV-----------------TSVVFNTDD-RVVSGSDDRTVKVWDLRN  387 (481)
T ss_pred             ceEEEEeccCceeEeccchhhcceeeeecccccce-----------------eEEEEecCC-ceeecCCCceEEEeeecc
Confidence            778899999999999999854 5567889998844                 445554443 478999999999999988


Q ss_pred             c-eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe-----cCCccceeccCCCCCCcccccccee
Q psy10942        444 Y-VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF-----DKHALKIRNSDSENDHKGFGLPRQL  517 (537)
Q Consensus       444 ~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~  517 (537)
                      . .++.+++ ...+++.++.+..++.|+.--++..|++||+. |..+..+     ++|...|           .++   +
T Consensus       388 MRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrtsRqgHrRMV-----------~c~---A  451 (481)
T KOG0300|consen  388 MRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRTSRQGHRRMV-----------TCC---A  451 (481)
T ss_pred             ccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecC-CCccccCCcccccccceee-----------eee---e
Confidence            4 4666776 56789999999998899988888999999994 5555444     4787788           777   8


Q ss_pred             eecCC--CEEEEEeCCCCEEeC
Q psy10942        518 CSRNS--DCEYRGGWSPQVVVY  537 (537)
Q Consensus       518 ~s~~~--~~l~s~~~dg~i~vW  537 (537)
                      |..+-  .-|++++-|..+.-|
T Consensus       452 W~eehp~cnLftcGFDR~v~gW  473 (481)
T KOG0300|consen  452 WLEEHPACNLFTCGFDRMVAGW  473 (481)
T ss_pred             ccccCcccccccccccceeeee
Confidence            86553  457788888887665

>KOG0301|consensus

Probab=99.94  E-value=1.3e-25  Score=206.00  Aligned_cols=275  Identities=21%  Similarity=0.277  Sum_probs=217.7

Q ss_pred             hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-hhcccCCCccEEE
Q psy10942         90 LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-IALLGEEDSHIVV  167 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~  167 (537)
                      .+.+.+| ..|..+++.+.. .++++++|+++++|+-..++         ......+.+|.+.+.. ++|.+.+...+++
T Consensus         7 s~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~---------~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~   76 (745)
T KOG0301|consen    7 SHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQ---------YLETHAFEGPKGFIANSICYAESDKGRLVV   76 (745)
T ss_pred             EEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcc---------cccceecccCcceeeccceeccccCcceEe
Confidence            3445555 366677765544 78899999999999987621         2223467778887766 8888655667888


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++.|..    +                 .+|..       .+....  |.     ||  ...|.++   +...++. +++
T Consensus        77 g~~D~~----i-----------------~v~~~-------~~~~P~~~Lk-----gH--~snVC~l---s~~~~~~-~iS  117 (745)
T KOG0301|consen   77 GGMDTT----I-----------------IVFKL-------SQAEPLYTLK-----GH--KSNVCSL---SIGEDGT-LIS  117 (745)
T ss_pred             ecccce----E-----------------EEEec-------CCCCchhhhh-----cc--ccceeee---ecCCcCc-eEe
Confidence            888887    8                 88888       666666  78     99  9999999   7777776 889


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      |+.|.+++  +|....-                                                  ...+.+|...|.+
T Consensus       118 gSWD~Tak--vW~~~~l--------------------------------------------------~~~l~gH~asVWA  145 (745)
T KOG0301|consen  118 GSWDSTAK--VWRIGEL--------------------------------------------------VYSLQGHTASVWA  145 (745)
T ss_pred             cccccceE--Eecchhh--------------------------------------------------hcccCCcchheee
Confidence            99999888  8887651                                                  1225689999999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      ++.-|++ .+++|+.|.+|++|.-   ++.++++.+|.+                                         
T Consensus       146 v~~l~e~-~~vTgsaDKtIklWk~---~~~l~tf~gHtD-----------------------------------------  180 (745)
T KOG0301|consen  146 VASLPEN-TYVTGSADKTIKLWKG---GTLLKTFSGHTD-----------------------------------------  180 (745)
T ss_pred             eeecCCC-cEEeccCcceeeeccC---Cchhhhhccchh-----------------------------------------
Confidence            9999987 8999999999999974   455666666655                                         


Q ss_pred             CCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                              -|..+++-+++. +++++.||.|++|++ +++.+.++.+|.+-|+++...+++..++++++|++++||+.. 
T Consensus       181 --------~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-  249 (745)
T KOG0301|consen  181 --------CVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-  249 (745)
T ss_pred             --------heeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-
Confidence                    566666666554 678889999999999 789999999999999999988888999999999999999965 


Q ss_pred             CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                       ++.+.+.-....+           +++   .+-++|. |++|+.||.||||
T Consensus       250 -e~~q~I~lPttsi-----------Wsa---~~L~NgD-Ivvg~SDG~VrVf  285 (745)
T KOG0301|consen  250 -ECVQVITLPTTSI-----------WSA---KVLLNGD-IVVGGSDGRVRVF  285 (745)
T ss_pred             -ceEEEEecCccce-----------EEE---EEeeCCC-EEEeccCceEEEE
Confidence             7888887766678           888   8878876 5578889999997

>KOG0300|consensus

Probab=99.94  E-value=3.4e-25  Score=184.65  Aligned_cols=311  Identities=16%  Similarity=0.277  Sum_probs=228.8

Q ss_pred             ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      ++++.+.+| +.|..++.......+.+++.|.+.+||.+++           +.++.++.||.+.|+++.|+ +.+.+++
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es-----------g~CL~~Y~GH~GSVNsikfh-~s~~L~l  206 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES-----------GACLATYTGHTGSVNSIKFH-NSGLLLL  206 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeecc-----------ccceeeecccccceeeEEec-cccceEE
Confidence            556677766 6899998887777899999999999999999           79999999999999999999 6677777


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      +++++..    -                 .||.....-   +..+.. -.     +|  .+.- ..   .-+........
T Consensus       207 TaSGD~t----a-----------------HIW~~av~~---~vP~~~a~~-----~h--SsEe-E~---e~sDe~~~d~d  251 (481)
T KOG0300|consen  207 TASGDET----A-----------------HIWKAAVNW---EVPSNNAPS-----DH--SSEE-EE---EHSDEHNRDTD  251 (481)
T ss_pred             EccCCcc----h-----------------HHHHHhhcC---cCCCCCCCC-----CC--Cchh-hh---hcccccccccc
Confidence            7777776    8                 899851110   011100 11     22  1110 00   01111111111


Q ss_pred             c--cCC-CcceeccccccCCCcccccccccccceeeeeeC--------CcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        246 Q--SME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--------GTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       246 ~--~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      +  ..| .+|+  +                |+..+.+|..        .....+++++.|.+-.+||+++++.     ..
T Consensus       252 ~~~~sD~~tiR--v----------------Pl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~-----v~  308 (481)
T KOG0300|consen  252 SSEKSDGHTIR--V----------------PLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEV-----VN  308 (481)
T ss_pred             cccccCCceee--e----------------eeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCce-----ec
Confidence            1  112 2444  1                0333344433        1116788999999999999999876     56


Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC---------CCEEEEEcCCCcEEEEECCCC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---------GTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---------~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      .+.+|....+.+.-+|..+++++.+.|.+.++||++.....+..+.+|.+         +..+++++.|.+|++||+++.
T Consensus       309 ~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNM  388 (481)
T KOG0300|consen  309 ILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNM  388 (481)
T ss_pred             cccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccc
Confidence            77899999999999999999999999999999999977788889999976         778999999999999999987


Q ss_pred             e-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee----EeecCCcceEEE
Q psy10942        386 T-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK----SLEGHDASVLRC  460 (537)
Q Consensus       386 ~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~v~~~  460 (537)
                      . ++.++...+                  +++.++.+..+.+++.--.+..|++||++...+.+    .-++|...|.|+
T Consensus       389 RsplATIRtdS------------------~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~  450 (481)
T KOG0300|consen  389 RSPLATIRTDS------------------PANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCC  450 (481)
T ss_pred             cCcceeeecCC------------------ccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeee
Confidence            4 444444443                  67778888888899998889999999997643322    335899999999


Q ss_pred             EEecCC--CEEEEEeCCCcEEEEECCCC
Q psy10942        461 HFINKG--TQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       461 ~~s~~~--~~l~s~~~dg~v~vwd~~~~  486 (537)
                      +|..+.  .-|++++.|..+.=|++...
T Consensus       451 AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  451 AWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             eccccCcccccccccccceeeeeEeccc
Confidence            998653  35889999999999998653

>KOG0268|consensus

Probab=99.94  E-value=1.4e-26  Score=196.33  Aligned_cols=275  Identities=15%  Similarity=0.206  Sum_probs=211.8

Q ss_pred             cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      +.|.+++=.|.. ..+|+|+.||.|+|||+..           ..+..++..|.+.|..+++. .  ..+++++.+..  
T Consensus        67 dGV~~lakhp~~ls~~aSGs~DG~VkiWnlsq-----------R~~~~~f~AH~G~V~Gi~v~-~--~~~~tvgdDKt--  130 (433)
T KOG0268|consen   67 DGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQ-----------RECIRTFKAHEGLVRGICVT-Q--TSFFTVGDDKT--  130 (433)
T ss_pred             cccchhhcCcchhhhhhccccCceEEEEehhh-----------hhhhheeecccCceeeEEec-c--cceEEecCCcc--
Confidence            689999999987 7799999999999999999           78999999999999999998 3  55677777777  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                        |                 +.|-+       ...-.. +.      .  ...+..+   .-+..+..+++++.+  |. 
T Consensus       131 --v-----------------K~wk~-------~~~p~~til------g--~s~~~gI---dh~~~~~~FaTcGe~--i~-  170 (433)
T KOG0268|consen  131 --V-----------------KQWKI-------DGPPLHTIL------G--KSVYLGI---DHHRKNSVFATCGEQ--ID-  170 (433)
T ss_pred             --e-----------------eeeec-------cCCcceeee------c--ccccccc---ccccccccccccCce--ee-
Confidence              9                 99987       332111 11      1  4566677   666777888988864  77 


Q ss_pred             ccccccCCCcccccccccccceeeeeeC-------Ccc--eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTG-------GTV--ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                       |||......         +..+..-.+       +.+  ..|+++..|+.|.+||+++...+.++..      .-.-+.
T Consensus       171 -IWD~~R~~P---------v~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~------~mRTN~  234 (433)
T KOG0268|consen  171 -IWDEQRDNP---------VSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL------TMRTNT  234 (433)
T ss_pred             -ecccccCCc---------cceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee------eccccc
Confidence             999876322         222222211       112  6788999999999999999987655522      123468


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      |+|+|.+-.+.+++.|..++.+|++.-..++.....|..                                         
T Consensus       235 IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvs-----------------------------------------  273 (433)
T KOG0268|consen  235 ICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVS-----------------------------------------  273 (433)
T ss_pred             eecCccccceeeccccccceehhhhhhcccchhhcccce-----------------------------------------
Confidence            999998888999999999999999955555555555543                                         


Q ss_pred             CCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                              .+.++.|||.|+-+++|+.|.+|+||....+.....+.. ....|.++.||.|.+++++||+|+.|++|...
T Consensus       274 --------AV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~  345 (433)
T KOG0268|consen  274 --------AVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK  345 (433)
T ss_pred             --------eEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence                    888999999999999999999999999987654443321 23569999999999999999999999999987


Q ss_pred             CCeeEEEe
Q psy10942        485 TSTCVSTF  492 (537)
Q Consensus       485 ~~~~~~~~  492 (537)
                      ..+.+..+
T Consensus       346 Aseklgv~  353 (433)
T KOG0268|consen  346 ASEKLGVI  353 (433)
T ss_pred             hhhhcCCC
Confidence            65554433

>KOG0640|consensus

Probab=99.94  E-value=1.8e-25  Score=185.72  Aligned_cols=274  Identities=12%  Similarity=0.094  Sum_probs=212.4

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCc------------cc------eeeee-ccccccceeeeEeecCcccc
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS------------RK------QLRSY-PAYESLETCAVFHLSDETES   62 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~------------~~------~~~~~-~~~~~~~~~~~~~~~~~~~~   62 (537)
                      |..+.|.+|+  +||.+++||+.|-.|+|.|++.            +.      .++++ .+-+++..+  .+.|     
T Consensus       112 K~~cR~aafs--~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l--~FHP-----  182 (430)
T KOG0640|consen  112 KSPCRAAAFS--PDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDL--DFHP-----  182 (430)
T ss_pred             ccceeeeeeC--CCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccce--eecc-----
Confidence            5678999999  9999999999999999999862            11      12222 266677777  5688     


Q ss_pred             ccCCcEEEEEeCccceEEeeeccceeh---hhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         63 KSGGKTFVLAGGEKSLLHYYETSAVKE---LYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        63 ~~~~~~~~~~~~~~~~i~~wd~~~~~~---~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                         ....|++++.|++|+++|......   ...++...+|.++.|.|.|.+|++|+...++++||+++           .
T Consensus       183 ---re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T-----------~  248 (430)
T KOG0640|consen  183 ---RETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT-----------Y  248 (430)
T ss_pred             ---hhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc-----------e
Confidence               568999999999999999976544   34445557999999999999999999999999999999           3


Q ss_pred             ceeE---EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--c
Q psy10942        140 KFRK---QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--K  214 (537)
Q Consensus       140 ~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l  214 (537)
                      ++.-   .-..|.+.|+++.++ +.++..++++.++.    |                 ++||-       -+.+|+  +
T Consensus       249 QcfvsanPd~qht~ai~~V~Ys-~t~~lYvTaSkDG~----I-----------------klwDG-------VS~rCv~t~  299 (430)
T KOG0640|consen  249 QCFVSANPDDQHTGAITQVRYS-STGSLYVTASKDGA----I-----------------KLWDG-------VSNRCVRTI  299 (430)
T ss_pred             eEeeecCcccccccceeEEEec-CCccEEEEeccCCc----E-----------------Eeecc-------ccHHHHHHH
Confidence            4332   234688999999999 77887788888777    9                 99998       788887  2


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--------Ccc-
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--------GTV-  285 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v-  285 (537)
                      .    ..|. ...|.+.   .|+.+|+++++.+.|..++  +|.+.++.    +     +..+.+...        ..+ 
T Consensus       300 ~----~AH~-gsevcSa---~Ftkn~kyiLsSG~DS~vk--LWEi~t~R----~-----l~~YtGAg~tgrq~~rtqAvF  360 (430)
T KOG0640|consen  300 G----NAHG-GSEVCSA---VFTKNGKYILSSGKDSTVK--LWEISTGR----M-----LKEYTGAGTTGRQKHRTQAVF  360 (430)
T ss_pred             H----hhcC-CceeeeE---EEccCCeEEeecCCcceee--eeeecCCc----e-----EEEEecCCcccchhhhhhhhh
Confidence            2    1563 5678888   9999999999999999999  99999843    2     222222110        111 


Q ss_pred             ----eEEEEE-eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        286 ----ELLASG-SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       286 ----~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                          .+++.- -..+.+.-||.++.....    ....+|.+.++.+.-||.+..+++++.|..+++|--+
T Consensus       361 NhtEdyVl~pDEas~slcsWdaRtadr~~----l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  361 NHTEDYVLFPDEASNSLCSWDARTADRVA----LLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             cCccceEEccccccCceeeccccchhhhh----hcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence                334333 345789999999876532    2345899999999999999999999999999999654

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=1.1e-24  Score=207.94  Aligned_cols=260  Identities=10%  Similarity=0.092  Sum_probs=182.5

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccc---eeEEeecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILK---FRKQFVGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      ..|.....++|+..+++++.+.....|+...+..... ....++   ....+.+|.+.|.+++|+|.+++.|++++.++.
T Consensus        21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~-~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt   99 (493)
T PTZ00421         21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLK-HTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT   99 (493)
T ss_pred             eccccccccCCCCCcEeECCceEEEEEecCCceEEee-ccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence            3456666777877777777777777777654311100 000011   123578999999999999557788888888877


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-------cc--ccccccccCCCcCeEEEEeccCcccCC-Cee
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-------QQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLF  243 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-------~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l  243 (537)
                          |                 ++||+       ....       ..  +.     +|  ...|.++   +|+|++ ++|
T Consensus       100 ----I-----------------kIWdi-------~~~~~~~~~~~~l~~L~-----gH--~~~V~~l---~f~P~~~~iL  141 (493)
T PTZ00421        100 ----I-----------------MGWGI-------PEEGLTQNISDPIVHLQ-----GH--TKKVGIV---SFHPSAMNVL  141 (493)
T ss_pred             ----E-----------------EEEec-------CCCccccccCcceEEec-----CC--CCcEEEE---EeCcCCCCEE
Confidence                9                 99998       4432       11  55     99  9999999   999975 577


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                      ++++.|+.|+  +||+..                                           ++.     ...+..|...|
T Consensus       142 aSgs~DgtVr--IWDl~t-------------------------------------------g~~-----~~~l~~h~~~V  171 (493)
T PTZ00421        142 ASAGADMVVN--VWDVER-------------------------------------------GKA-----VEVIKCHSDQI  171 (493)
T ss_pred             EEEeCCCEEE--EEECCC-------------------------------------------CeE-----EEEEcCCCCce
Confidence            7777777777  777655                                           221     12235678889


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      .+++|+|++++|++++.|+.|++||++ ..+.+..+..|...                                      
T Consensus       172 ~sla~spdG~lLatgs~Dg~IrIwD~r-sg~~v~tl~~H~~~--------------------------------------  212 (493)
T PTZ00421        172 TSLEWNLDGSLLCTTSKDKKLNIIDPR-DGTIVSSVEAHASA--------------------------------------  212 (493)
T ss_pred             EEEEEECCCCEEEEecCCCEEEEEECC-CCcEEEEEecCCCC--------------------------------------
Confidence            999999999999999999999999998 55555555555320                                      


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEe----CCCcEEEEECCCce-eeeEeecC-CcceEEEEEecCCCEEEEEe-CCC
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSS----GDATIKLWCLTDYV-CLKSLEGH-DASVLRCHFINKGTQIVSTG-ADG  476 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~i~d~~~~~-~~~~~~~~-~~~v~~~~~s~~~~~l~s~~-~dg  476 (537)
                                ....+.|.+++..+++++    .|+.|++||+++.. ++.....+ ...+....|++++++|++++ .|+
T Consensus       213 ----------~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg  282 (493)
T PTZ00421        213 ----------KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEG  282 (493)
T ss_pred             ----------cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCC
Confidence                      123355667666666543    47899999998754 34333333 34456677899999999888 499


Q ss_pred             cEEEEECCCCeeEEEecC
Q psy10942        477 LLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       477 ~v~vwd~~~~~~~~~~~~  494 (537)
                      .|++||+.+++++.....
T Consensus       283 ~Iriwdl~~~~~~~~~~~  300 (493)
T PTZ00421        283 NIRCFELMNERLTFCSSY  300 (493)
T ss_pred             eEEEEEeeCCceEEEeec
Confidence            999999999887766543

>KOG0264|consensus

Probab=99.94  E-value=8.5e-25  Score=191.32  Aligned_cols=247  Identities=19%  Similarity=0.235  Sum_probs=189.6

Q ss_pred             cCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccc-cccccceeeeeeC--Ccc-------eEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGI-FVPEAEHGAFYTG--GTV-------ELLA  289 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~-~~~~~~~~~~~~~--~~v-------~~l~  289 (537)
                      -|  .+.|..+   .+.|.. ..+++.+..+.+.  |||........... ...|...+.+|..  .++       ..++
T Consensus       122 ~h--~gEVnRa---RymPQnp~iVAt~t~~~dv~--Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Ll  194 (422)
T KOG0264|consen  122 NH--DGEVNRA---RYMPQNPNIVATKTSSGDVY--VFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLL  194 (422)
T ss_pred             cC--Cccchhh---hhCCCCCcEEEecCCCCCEE--EEEeccCCCcccccccCCCceEEEeecccccccccccccceeEe
Confidence            67  8899999   898876 4666778889999  99988743322211 2233557788876  232       7899


Q ss_pred             EEeCCCeEEEEECCCCcee--eeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccC-CceeeEEEEecCCC
Q psy10942        290 SGSLDKTVKVWSTTGGLKL--LNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTG-GLKLLNVLRGHKKG  365 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~  365 (537)
                      +++.|++|++||+......  .......+.+|...|..++|+| +..+|++++.|+.+.|||++. ..++.....     
T Consensus       195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~-----  269 (422)
T KOG0264|consen  195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVK-----  269 (422)
T ss_pred             eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccc-----
Confidence            9999999999999866542  1112456789999999999999 456788899999999999994 222333333     


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCC-
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTD-  443 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~-  443 (537)
                                                 .|..                 .+++++|+|- +.+||+|+.|++|.+||+++ 
T Consensus       270 ---------------------------ah~~-----------------~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL  305 (422)
T KOG0264|consen  270 ---------------------------AHSA-----------------EVNCVAFNPFNEFILATGSADKTVALWDLRNL  305 (422)
T ss_pred             ---------------------------ccCC-----------------ceeEEEeCCCCCceEEeccCCCcEEEeechhc
Confidence                                       3333                 7777778774 56889999999999999998 


Q ss_pred             ceeeeEeecCCcceEEEEEecC-CCEEEEEeCCCcEEEEECCCC--------------eeEEEecCCccceeccCCCCCC
Q psy10942        444 YVCLKSLEGHDASVLRCHFINK-GTQIVSTGADGLLKLWSIKTS--------------TCVSTFDKHALKIRNSDSENDH  508 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~vwd~~~~--------------~~~~~~~~~~~~i~~~~~~~~~  508 (537)
                      .+++.++.+|...|.++.|||. ...||+++.|+.+.|||+..-              +++..-.||...|         
T Consensus       306 ~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV---------  376 (422)
T KOG0264|consen  306 NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKV---------  376 (422)
T ss_pred             ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCccccc---------
Confidence            4678999999999999999995 568899999999999998642              2334456788888         


Q ss_pred             ccccccceeeecCCCE-EEEEeCCCCEEeC
Q psy10942        509 KGFGLPRQLCSRNSDC-EYRGGWSPQVVVY  537 (537)
Q Consensus       509 ~~~~~~~~~~s~~~~~-l~s~~~dg~i~vW  537 (537)
                        ..+   .|+|...+ |+|++.|+.+.||
T Consensus       377 --~Df---sWnp~ePW~I~SvaeDN~LqIW  401 (422)
T KOG0264|consen  377 --SDF---SWNPNEPWTIASVAEDNILQIW  401 (422)
T ss_pred             --ccc---cCCCCCCeEEEEecCCceEEEe
Confidence              888   99999885 5678999999999

>KOG0299|consensus

Probab=99.93  E-value=8.1e-25  Score=191.46  Aligned_cols=276  Identities=17%  Similarity=0.200  Sum_probs=209.9

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcc---cc------cccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLE---ER------PNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~---~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                      ++-.+.+++++||+++..+++.+++|.-|++.++....   ..      ...+.+..+  ++|...+.+++.+ +|+++|
T Consensus       141 H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r--~~h~keil~~avS-~Dgkyl  217 (479)
T KOG0299|consen  141 HQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESR--KGHVKEILTLAVS-SDGKYL  217 (479)
T ss_pred             ccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccc--ccccceeEEEEEc-CCCcEE
Confidence            33589999999999999999999999999999875431   11      111111111  4888899999999 899999


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      +++..+..    |                 .||+.       ++.+.+  ++     +|  .+.|.++   +|-.....+
T Consensus       218 atgg~d~~----v-----------------~Iw~~-------~t~ehv~~~~-----gh--r~~V~~L---~fr~gt~~l  259 (479)
T KOG0299|consen  218 ATGGRDRH----V-----------------QIWDC-------DTLEHVKVFK-----GH--RGAVSSL---AFRKGTSEL  259 (479)
T ss_pred             EecCCCce----E-----------------EEecC-------cccchhhccc-----cc--ccceeee---eeecCccce
Confidence            98888777    8                 89999       888877  78     99  9999999   887777777


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                      ++++.|+.++  +|+++.                                           ...     ..++.+|.+.|
T Consensus       260 ys~s~Drsvk--vw~~~~-------------------------------------------~s~-----vetlyGHqd~v  289 (479)
T KOG0299|consen  260 YSASADRSVK--VWSIDQ-------------------------------------------LSY-----VETLYGHQDGV  289 (479)
T ss_pred             eeeecCCceE--EEehhH-------------------------------------------hHH-----HHHHhCCccce
Confidence            7777777777  666655                                           222     45567899999


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      .++....-++.+-+|+.|+++++|++....++  .+.++.                                .       
T Consensus       290 ~~IdaL~reR~vtVGgrDrT~rlwKi~eesql--ifrg~~--------------------------------~-------  328 (479)
T KOG0299|consen  290 LGIDALSRERCVTVGGRDRTVRLWKIPEESQL--IFRGGE--------------------------------G-------  328 (479)
T ss_pred             eeechhcccceEEeccccceeEEEecccccee--eeeCCC--------------------------------C-------
Confidence            99998888888888889999999999632222  122221                                1       


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-C-----------CcceEEEEEecCCCEEEE
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-H-----------DASVLRCHFINKGTQIVS  471 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-----------~~~v~~~~~s~~~~~l~s  471 (537)
                                .+-|++|-.+ ..+++|+.||.|.+|++.+.+++.+.+. |           ...|++++..|...++|+
T Consensus       329 ----------sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~as  397 (479)
T KOG0299|consen  329 ----------SIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLAS  397 (479)
T ss_pred             ----------CeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEe
Confidence                      5556666544 3588999999999999998888776542 2           227899999999999999


Q ss_pred             EeCCCcEEEEECCCC----eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        472 TGADGLLKLWSIKTS----TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      |+.+|.|++|.+..+    +++..+. -.+-|           +++   +|+++|+.|++|
T Consensus       398 GS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfV-----------Nsl---~f~~sgk~ivag  443 (479)
T KOG0299|consen  398 GSWSGCVRLWKIEDGLRAINLLYSLS-LVGFV-----------NSL---AFSNSGKRIVAG  443 (479)
T ss_pred             cCCCCceEEEEecCCccccceeeecc-cccEE-----------EEE---EEccCCCEEEEe
Confidence            999999999999887    3334443 33455           777   999999977766

>KOG2055|consensus

Probab=99.93  E-value=9.5e-25  Score=191.04  Aligned_cols=287  Identities=12%  Similarity=0.104  Sum_probs=217.4

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc-cEEEeeecccc
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS-HIVVASNEYLN  174 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~~~~~  174 (537)
                      ++.|+++.|.|....|.+|+.|++++||.++...         ...++.+.-...+|.+.+|. |++. .+++++.... 
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~---------N~~lqS~~l~~fPi~~a~f~-p~G~~~i~~s~rrky-  281 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKV---------NPKLQSIHLEKFPIQKAEFA-PNGHSVIFTSGRRKY-  281 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCcc---------ChhheeeeeccCccceeeec-CCCceEEEecccceE-
Confidence            3799999999999999999999999999998732         34555555556789999999 5555 6666665555 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                         +                 ..||+       .+.+.. +.  ++.++. ...+...   ..++++++|+..+..|.|.
T Consensus       282 ---~-----------------ysyDl-------e~ak~~k~~--~~~g~e-~~~~e~F---eVShd~~fia~~G~~G~I~  328 (514)
T KOG2055|consen  282 ---L-----------------YSYDL-------ETAKVTKLK--PPYGVE-EKSMERF---EVSHDSNFIAIAGNNGHIH  328 (514)
T ss_pred             ---E-----------------EEeec-------ccccccccc--CCCCcc-cchhhee---EecCCCCeEEEcccCceEE
Confidence               7                 88999       666554 22  111441 3445556   7899999988888888777


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +-...+                                           ++.+.     .+ .-.+.|..++|+.|++
T Consensus       329 --lLhakT-------------------------------------------~eli~-----s~-KieG~v~~~~fsSdsk  357 (514)
T KOG2055|consen  329 --LLHAKT-------------------------------------------KELIT-----SF-KIEGVVSDFTFSSDSK  357 (514)
T ss_pred             --eehhhh-------------------------------------------hhhhh-----ee-eeccEEeeEEEecCCc
Confidence              554444                                           22111     01 1245689999999999


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      .|++.+.+|.|.+||++ ...+++.+.....            +                                    
T Consensus       358 ~l~~~~~~GeV~v~nl~-~~~~~~rf~D~G~------------v------------------------------------  388 (514)
T KOG2055|consen  358 ELLASGGTGEVYVWNLR-QNSCLHRFVDDGS------------V------------------------------------  388 (514)
T ss_pred             EEEEEcCCceEEEEecC-CcceEEEEeecCc------------c------------------------------------
Confidence            99999999999999999 5455554433211            0                                    


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCC------ceeeeEeecCCcceEEEEEecCCCEEEEEeC--CCcEEEEECCC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTD------YVCLKSLEGHDASVLRCHFINKGTQIVSTGA--DGLLKLWSIKT  485 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~v~vwd~~~  485 (537)
                      .-+++|.|+++.|||+|+..|.|.|||.++      .+++..+..-...|+++.|+||+++||.+|.  +..+|+-.+.+
T Consensus       389 ~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS  468 (514)
T KOG2055|consen  389 HGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPS  468 (514)
T ss_pred             ceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccc
Confidence            346788899999999999999999999654      5677777777788999999999999998875  67899999988


Q ss_pred             CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ......++....++           ..+.|++|||.+.+||.|..+|.+.+|
T Consensus       469 ~TVFsNfP~~n~~v-----------g~vtc~aFSP~sG~lAvGNe~grv~l~  509 (514)
T KOG2055|consen  469 CTVFSNFPTSNTKV-----------GHVTCMAFSPNSGYLAVGNEAGRVHLF  509 (514)
T ss_pred             eeeeccCCCCCCcc-----------cceEEEEecCCCceEEeecCCCceeeE
Confidence            88777777666665           444444999999999999999999998

>KOG1445|consensus

Probab=99.93  E-value=2.3e-25  Score=202.28  Aligned_cols=110  Identities=23%  Similarity=0.286  Sum_probs=100.4

Q ss_pred             eeeEEEEcC-CCCEEEEEeCCCcEEEEECCC-------ceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECC
Q psy10942        414 GVWFVNFSP-LDRILISSSGDATIKLWCLTD-------YVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       414 ~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~  484 (537)
                      .|+.+.|+| |.+.||+++.||.|++|.+..       ..+...+..|...|+++.|+| -...|++++.|-+|++||+.
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~  708 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA  708 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence            488999998 568999999999999998865       345667889999999999999 45689999999999999999


Q ss_pred             CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++....+.+|.+.|           .++   +|||||+++|+.+.||+|+||
T Consensus       709 ~~~~~~~l~gHtdqI-----------f~~---AWSpdGr~~AtVcKDg~~rVy  747 (1012)
T KOG1445|consen  709 NAKLYSRLVGHTDQI-----------FGI---AWSPDGRRIATVCKDGTLRVY  747 (1012)
T ss_pred             hhhhhheeccCcCce-----------eEE---EECCCCcceeeeecCceEEEe
Confidence            999999999999999           999   999999999999999999986

>KOG0646|consensus

Probab=99.93  E-value=3.7e-25  Score=193.98  Aligned_cols=325  Identities=17%  Similarity=0.214  Sum_probs=224.9

Q ss_pred             cCc-ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEe-CccceEEeeeccceehhh-hcCCCcce
Q psy10942         23 GRD-KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAG-GEKSLLHYYETSAVKELY-QHGLSSPL   99 (537)
Q Consensus        23 ~~~-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~wd~~~~~~~~-~~~~~~~v   99 (537)
                      +.| ..+.+||+.+|..+-+++........+...+         +..+++++ .....|.+|.+....... ..-.++.|
T Consensus        14 S~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l---------~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v   84 (476)
T KOG0646|consen   14 SFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL---------NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPV   84 (476)
T ss_pred             CCCCcceeEEecCCCceeEEecCcccccchhhhhh---------chhheeeecccCccccccccCchhhhhhhcccccce
Confidence            444 5599999999999888874422211111122         22455554 445679999988765554 55567899


Q ss_pred             EEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccc
Q psy10942        100 VRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLS  179 (537)
Q Consensus       100 ~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~  179 (537)
                      .+++-+|+|.+|+.|+..+.|++|.+.+           +.++..+..|-..|+++.|+ .|+.++++++.|+.    | 
T Consensus        85 ~al~s~n~G~~l~ag~i~g~lYlWelss-----------G~LL~v~~aHYQ~ITcL~fs-~dgs~iiTgskDg~----V-  147 (476)
T KOG0646|consen   85 HALASSNLGYFLLAGTISGNLYLWELSS-----------GILLNVLSAHYQSITCLKFS-DDGSHIITGSKDGA----V-  147 (476)
T ss_pred             eeeecCCCceEEEeecccCcEEEEEecc-----------ccHHHHHHhhccceeEEEEe-CCCcEEEecCCCcc----E-
Confidence            9999999999999998999999999999           79999999999999999999 89999999998887    9 


Q ss_pred             ceeecccCCCcchhhHHHHHHHHHhhhccc--cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        180 GLVKLGANRSHNEWFDKTFERILEAKFKQS--SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~--~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                                      .+|++..-....++  ....  +.     +|  .-+|+.+   ...+.|           .   
T Consensus       148 ----------------~vW~l~~lv~a~~~~~~~p~~~f~-----~H--tlsITDl---~ig~Gg-----------~---  187 (476)
T KOG0646|consen  148 ----------------LVWLLTDLVSADNDHSVKPLHIFS-----DH--TLSITDL---QIGSGG-----------T---  187 (476)
T ss_pred             ----------------EEEEEEeecccccCCCccceeeec-----cC--cceeEEE---EecCCC-----------c---
Confidence                            88876111110011  1111  33     66  6666666   333221           0   


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                                                   -.++++++.|.++++||+..+..+..+      .....+.+++.+|-++.+
T Consensus       188 -----------------------------~~rl~TaS~D~t~k~wdlS~g~LLlti------~fp~si~av~lDpae~~~  232 (476)
T KOG0646|consen  188 -----------------------------NARLYTASEDRTIKLWDLSLGVLLLTI------TFPSSIKAVALDPAERVV  232 (476)
T ss_pred             -----------------------------cceEEEecCCceEEEEEeccceeeEEE------ecCCcceeEEEcccccEE
Confidence                                         035677777777778887777654433      345679999999999999


Q ss_pred             EEEeCCCcEEEEEccCCcee---eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        336 ASGSLDKTVKVWSTTGGLKL---LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      ++|+.+|.|.+.++......   +..-..|.                    .+..+..+.+|...               
T Consensus       233 yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~--------------------~~t~~~~~~Gh~~~---------------  277 (476)
T KOG0646|consen  233 YIGTEEGKIFQNLLFKLSGQSAGVNQKGRHE--------------------ENTQINVLVGHENE---------------  277 (476)
T ss_pred             EecCCcceEEeeehhcCCccccccccccccc--------------------ccceeeeeccccCC---------------
Confidence            99999999999888722110   11111111                    12233344444431               


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEE-EeCCCcEEEEEC
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVS-TGADGLLKLWSI  483 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~dg~v~vwd~  483 (537)
                      ..|+|++++-||..|++|+.||.++|||+.+.++++++....++|+.+.+.|-.+-... -.....+-.|++
T Consensus       278 ~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~l  349 (476)
T KOG0646|consen  278 SAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHL  349 (476)
T ss_pred             cceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceecccccCccCCchHh
Confidence            17899999999999999999999999999999999998877889999999764332322 222333444443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.93  E-value=9.6e-24  Score=195.29  Aligned_cols=285  Identities=11%  Similarity=0.055  Sum_probs=198.3

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEE-EEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMY-AVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      .++++++.++.|++||+.+++.+..+..+..+..++|+|+++.+ ++++.++.|++||..+           ++....+.
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~-----------~~~~~~~~   70 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLAT-----------GEVIGTLP   70 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCC-----------CcEEEecc
Confidence            46888899999999999999988888877778899999999976 5667789999999988           56666665


Q ss_pred             cchhhhhhhhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE  224 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~  224 (537)
                      .+.. +..++|+ ++++.++++.. ++.    +                 ++||+       .+.+.. ..     .+  
T Consensus        71 ~~~~-~~~~~~~-~~g~~l~~~~~~~~~----l-----------------~~~d~-------~~~~~~~~~-----~~--  113 (300)
T TIGR03866        71 SGPD-PELFALH-PNGKILYIANEDDNL----V-----------------TVIDI-------ETRKVLAEI-----PV--  113 (300)
T ss_pred             CCCC-ccEEEEC-CCCCEEEEEcCCCCe----E-----------------EEEEC-------CCCeEEeEe-----eC--
Confidence            5443 5678898 66666655432 334    8                 99999       665544 11     12  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                      ...+.++   +|+|++++++++..++. +.  +|+...                                          
T Consensus       114 ~~~~~~~---~~~~dg~~l~~~~~~~~~~~--~~d~~~------------------------------------------  146 (300)
T TIGR03866       114 GVEPEGM---AVSPDGKIVVNTSETTNMAH--FIDTKT------------------------------------------  146 (300)
T ss_pred             CCCcceE---EECCCCCEEEEEecCCCeEE--EEeCCC------------------------------------------
Confidence            2345778   89999999988776543 34  445433                                          


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                       .+.....      ........++|+|+++.|++++ .++.|++||+. ..+.+..+..+..+.                
T Consensus       147 -~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~-~~~~~~~~~~~~~~~----------------  202 (300)
T TIGR03866       147 -YEIVDNV------LVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVA-TRKVIKKITFEIPGV----------------  202 (300)
T ss_pred             -CeEEEEE------EcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcC-cceeeeeeeeccccc----------------
Confidence             1111000      0112245789999999886554 58999999998 555444443221100                


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEEECCCceeeeEeecCCcceEEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLWCLTDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  461 (537)
                                 +...               .....++|+|++++++++ ..++.+.+||+.+++.+..+. +...+.+++
T Consensus       203 -----------~~~~---------------~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~  255 (300)
T TIGR03866       203 -----------HPEA---------------VQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLA  255 (300)
T ss_pred             -----------cccc---------------CCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEE
Confidence                       0000               023457889999886554 456789999999888776654 445789999


Q ss_pred             EecCCCEEEEE-eCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        462 FINKGTQIVST-GADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       462 ~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      |+|++++|+++ +.++.|++||+++++.+..++.. ...
T Consensus       256 ~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~  293 (300)
T TIGR03866       256 FTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLP  293 (300)
T ss_pred             ECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-ccc
Confidence            99999999886 46899999999999999888754 444

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2096|consensus

Probab=99.93  E-value=4e-24  Score=178.44  Aligned_cols=294  Identities=14%  Similarity=0.120  Sum_probs=197.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee--eec---cccccceeeeEeecCccccccCCcEEEEEeCccc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR--SYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKS   77 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (537)
                      -.|+|++|+  .||++|+|++.|++|++|+++......  .+.   .....+.+  ++.|+       -..+++......
T Consensus        87 ~~vt~~~Fs--SdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V--~FapD-------c~s~vv~~~~g~  155 (420)
T KOG2096|consen   87 KEVTDVAFS--SDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRV--VFAPD-------CKSVVVSVKRGN  155 (420)
T ss_pred             CceeeeEEc--CCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEE--EECCC-------cceEEEEEccCC
Confidence            469999999  999999999999999999998754322  111   22233445  66775       445566666667


Q ss_pred             eEEeeeccceeh---hhhcC----------CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         78 LLHYYETSAVKE---LYQHG----------LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        78 ~i~~wd~~~~~~---~~~~~----------~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      .|++|.+...+.   -....          +.-.|..+-...++++|++++.|..|.+|++..            +.+..
T Consensus       156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG------------q~L~~  223 (420)
T KOG2096|consen  156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG------------QLLQS  223 (420)
T ss_pred             EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC------------ceeee
Confidence            799998754322   11111          002566777788899999999999999999985            56666


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +......-+..+.+ |++++++++.-..+    +                 ++|.+..    .+.+..+  .+..++.||
T Consensus       224 idtnq~~n~~aavS-P~GRFia~~gFTpD----V-----------------kVwE~~f----~kdG~fqev~rvf~LkGH  277 (420)
T KOG2096|consen  224 IDTNQSSNYDAAVS-PDGRFIAVSGFTPD----V-----------------KVWEPIF----TKDGTFQEVKRVFSLKGH  277 (420)
T ss_pred             eccccccccceeeC-CCCcEEEEecCCCC----c-----------------eEEEEEe----ccCcchhhhhhhheeccc
Confidence            66666666777888 89999998888888    9                 9997622    1222222  223334499


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...|..+   +|+++.+.+++.+.||.++  +||++-....                          ..|..+    +
T Consensus       278 --~saV~~~---aFsn~S~r~vtvSkDG~wr--iwdtdVrY~~--------------------------~qDpk~----L  320 (420)
T KOG2096|consen  278 --QSAVLAA---AFSNSSTRAVTVSKDGKWR--IWDTDVRYEA--------------------------GQDPKI----L  320 (420)
T ss_pred             --hhheeee---eeCCCcceeEEEecCCcEE--EeeccceEec--------------------------CCCchH----h
Confidence              9999999   9999999999999999999  9998762100                          001100    0


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                      ..+       ...+....+.-..+.++|+|+.|+.+. ...++++..+. ++....+.                      
T Consensus       321 k~g-------~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~-g~~~~~~e----------------------  369 (420)
T KOG2096|consen  321 KEG-------SAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASED-GKDYPELE----------------------  369 (420)
T ss_pred             hcC-------CcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEccc-CccchhHH----------------------
Confidence            011       111122223334789999999888764 35688877763 22211111                      


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                               ..|.                 +.|.+++|+++|+++++++ |..++++.
T Consensus       370 ---------~~h~-----------------~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  370 ---------DIHS-----------------TTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             ---------Hhhc-----------------CceeeEEecCCCcEEeeec-ceeeeeec
Confidence                     0111                 1789999999999999986 46777764

>KOG0264|consensus

Probab=99.93  E-value=9e-25  Score=191.17  Aligned_cols=265  Identities=20%  Similarity=0.287  Sum_probs=193.5

Q ss_pred             cCCCcceEEEEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         93 HGLSSPLVRIVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        93 ~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      +.+.+.|..+.+.|.... +|+.+..+.+.|||............ ...+--++.+|...-++++|++.....|++++.+
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~-~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d  199 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG-ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD  199 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc-cCCCceEEEeecccccccccccccceeEeeccCC
Confidence            445578999999887765 66677788999999987433221111 2334458899998888999998788888888877


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC-CeeeeccCCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEP  250 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~  250 (537)
                      ..    +                 .+||+.+....   .........+.+|  ...|..+   +|++-. ..|++++.|+
T Consensus       200 ~~----i-----------------~lwdi~~~~~~---~~~~~p~~~~~~h--~~~VeDV---~~h~~h~~lF~sv~dd~  250 (422)
T KOG0264|consen  200 HT----I-----------------CLWDINAESKE---DKVVDPKTIFSGH--EDVVEDV---AWHPLHEDLFGSVGDDG  250 (422)
T ss_pred             Cc----E-----------------EEEeccccccC---CccccceEEeecC--Ccceehh---hccccchhhheeecCCC
Confidence            77    9                 99999222221   1112222233499  9999999   888744 4556666666


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .+.  |||++..                                         +.+.     .....+|.++|.|++|+|
T Consensus       251 ~L~--iwD~R~~-----------------------------------------~~~~-----~~~~~ah~~~vn~~~fnp  282 (422)
T KOG0264|consen  251 KLM--IWDTRSN-----------------------------------------TSKP-----SHSVKAHSAEVNCVAFNP  282 (422)
T ss_pred             eEE--EEEcCCC-----------------------------------------CCCC-----cccccccCCceeEEEeCC
Confidence            666  6666541                                         1111     344578999999999999


Q ss_pred             -CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        331 -NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       331 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                       ++..||+|+.|++|.+||++.-.+++..+..|.+                                             
T Consensus       283 ~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~d---------------------------------------------  317 (422)
T KOG0264|consen  283 FNEFILATGSADKTVALWDLRNLNKPLHTFEGHED---------------------------------------------  317 (422)
T ss_pred             CCCceEEeccCCCcEEEeechhcccCceeccCCCc---------------------------------------------
Confidence             5678899999999999999965556666665555                                             


Q ss_pred             eEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCC--------------ceeeeEeecCCcceEEEEEecCCC-EEEEEe
Q psy10942        410 IITGGVWFVNFSPLD-RILISSSGDATIKLWCLTD--------------YVCLKSLEGHDASVLRCHFINKGT-QIVSTG  473 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~  473 (537)
                          .|..+.|||.. ..||+++.|+.+.+||+..              .+++..-.||...|..+.|+|+.. .|++++
T Consensus       318 ----ev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sva  393 (422)
T KOG0264|consen  318 ----EVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVA  393 (422)
T ss_pred             ----ceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEec
Confidence                77778888864 6889999999999999864              234566678999999999999765 567889


Q ss_pred             CCCcEEEEECC
Q psy10942        474 ADGLLKLWSIK  484 (537)
Q Consensus       474 ~dg~v~vwd~~  484 (537)
                      .|+.+.||++.
T Consensus       394 eDN~LqIW~~s  404 (422)
T KOG0264|consen  394 EDNILQIWQMA  404 (422)
T ss_pred             CCceEEEeecc
Confidence            99999999975

>PTZ00420 coronin; Provisional

Probab=99.93  E-value=3.4e-23  Score=198.38  Aligned_cols=254  Identities=11%  Similarity=0.122  Sum_probs=177.7

Q ss_pred             EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942        114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW  193 (537)
Q Consensus       114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~  193 (537)
                      |+.++.|++|+...           ...+..+.+|.+.|.+++|+|.++..|++++.++.    |               
T Consensus        50 GG~~gvI~L~~~~r-----------~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~Dgt----I---------------   99 (568)
T PTZ00420         50 GGLIGAIRLENQMR-----------KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLT----I---------------   99 (568)
T ss_pred             CCceeEEEeeecCC-----------CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCe----E---------------
Confidence            45678899999877           56778899999999999999655788888887777    9               


Q ss_pred             hHHHHHHHHHhhhccccccc---c--cccccccCCCcCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccc
Q psy10942        194 FDKTFERILEAKFKQSSSQQ---K--HNTERLGRDELKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLF  267 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~~~~~---l--~~~~~~~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~  267 (537)
                        ++||+       .+....   +  ....+.+|  ...|.++   +|+|++..+ ++++.|+.++  +||+..+     
T Consensus       100 --rIWDi-------~t~~~~~~~i~~p~~~L~gH--~~~V~sV---af~P~g~~iLaSgS~DgtIr--IWDl~tg-----  158 (568)
T PTZ00420        100 --RVWEI-------PHNDESVKEIKDPQCILKGH--KKKISII---DWNPMNYYIMCSSGFDSFVN--IWDIENE-----  158 (568)
T ss_pred             --EEEEC-------CCCCccccccccceEEeecC--CCcEEEE---EECCCCCeEEEEEeCCCeEE--EEECCCC-----
Confidence              99998       432110   0  00112389  9999999   999988654 5777777777  7777652     


Q ss_pred             cccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW  347 (537)
Q Consensus       268 ~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~  347 (537)
                                                            +....     + .|...|.+++|+|+|++|++++.|+.|++|
T Consensus       159 --------------------------------------~~~~~-----i-~~~~~V~SlswspdG~lLat~s~D~~IrIw  194 (568)
T PTZ00420        159 --------------------------------------KRAFQ-----I-NMPKKLSSLKWNIKGNLLSGTCVGKHMHII  194 (568)
T ss_pred             --------------------------------------cEEEE-----E-ecCCcEEEEEECCCCCEEEEEecCCEEEEE
Confidence                                                  11110     1 134568999999999999999999999999


Q ss_pred             EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942        348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL  427 (537)
Q Consensus       348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  427 (537)
                      |++ ..+.+..+..|....                                ...            .+....|++++.+|
T Consensus       195 D~R-sg~~i~tl~gH~g~~--------------------------------~s~------------~v~~~~fs~d~~~I  229 (568)
T PTZ00420        195 DPR-KQEIASSFHIHDGGK--------------------------------NTK------------NIWIDGLGGDDNYI  229 (568)
T ss_pred             ECC-CCcEEEEEecccCCc--------------------------------eeE------------EEEeeeEcCCCCEE
Confidence            999 566666666664310                                000            23334577888999


Q ss_pred             EEEeCCC----cEEEEECCC-ceeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC--Cccc
Q psy10942        428 ISSSGDA----TIKLWCLTD-YVCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK--HALK  498 (537)
Q Consensus       428 ~~~~~dg----~i~i~d~~~-~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~--~~~~  498 (537)
                      ++++.|+    .|+|||+++ .+++..+..  +.+.+......+++.++++|+.|+.|++|++..+. +..+..  +..+
T Consensus       230 lTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~s~~p  308 (568)
T PTZ00420        230 LSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYKSCSP  308 (568)
T ss_pred             EEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-EEeecccccCCC
Confidence            9888764    799999985 555655443  22333333334568899999999999999997764 333322  3344


Q ss_pred             eeccCCCCCCccccccceeeecCC
Q psy10942        499 IRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       499 i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      .           .++   +|.|..
T Consensus       309 ~-----------~g~---~f~Pkr  318 (568)
T PTZ00420        309 F-----------RSF---GFLPKQ  318 (568)
T ss_pred             c-----------cce---EEcccc
Confidence            5           666   888764

>KOG2096|consensus

Probab=99.92  E-value=2.9e-23  Score=173.33  Aligned_cols=277  Identities=17%  Similarity=0.167  Sum_probs=196.7

Q ss_pred             ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc--ccc--cceeeeeeCCcceEEEEEeC
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF--VPE--AEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~--~~~--~~~~~~~~~~~v~~l~~~~~  293 (537)
                      .+.+|  .+.|+++   +|+.||++|++++.|+.|+  +|++++-.......+  ..+  ..+.......+-..+++.-.
T Consensus        81 ~LKgH--~~~vt~~---~FsSdGK~lat~~~Dr~Ir--~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~  153 (420)
T KOG2096|consen   81 VLKGH--KKEVTDV---AFSSDGKKLATISGDRSIR--LWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKR  153 (420)
T ss_pred             hhhcc--CCceeee---EEcCCCceeEEEeCCceEE--EEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEcc
Confidence            34499  9999999   9999999999999999999  999988433221110  000  11111111122256666677


Q ss_pred             CCeEEEEECCCCcee---eee-e---cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----
Q psy10942        294 DKTVKVWSTTGGLKL---LNV-L---RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----  361 (537)
Q Consensus       294 d~~i~i~~~~~~~~~---~~~-~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----  361 (537)
                      ..++++|.+...+.-   ... .   ....+.|...+..+-...++.++++++.|..|.+|+++  ++.+..+..     
T Consensus       154 g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk--Gq~L~~idtnq~~n  231 (420)
T KOG2096|consen  154 GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK--GQLLQSIDTNQSSN  231 (420)
T ss_pred             CCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC--Cceeeeeccccccc
Confidence            788999976543211   000 0   11224566778888888889999999999999999998  445444433     


Q ss_pred             -----cCCCCEEEEEcCCCcEEEEECCCC--------eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE
Q psy10942        362 -----HKKGTQIVSTGADGLLKLWSIKTS--------TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI  428 (537)
Q Consensus       362 -----~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  428 (537)
                           .|+|.++++++..-.+++|.+--+        .....+.+|..                 .+..++|||+.+.++
T Consensus       232 ~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~s-----------------aV~~~aFsn~S~r~v  294 (420)
T KOG2096|consen  232 YDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS-----------------AVLAAAFSNSSTRAV  294 (420)
T ss_pred             cceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchh-----------------heeeeeeCCCcceeE
Confidence                 466899999999999999986321        23455667766                 788999999999999


Q ss_pred             EEeCCCcEEEEECCC----c---eeeeEe----ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec-CCc
Q psy10942        429 SSSGDATIKLWCLTD----Y---VCLKSL----EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD-KHA  496 (537)
Q Consensus       429 ~~~~dg~i~i~d~~~----~---~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-~~~  496 (537)
                      +.+.||++++||+.-    +   +.+.+.    ..-.+.-..+..+|+|+.||.+. ...++++..++|+..-.++ .|.
T Consensus       295 tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~  373 (420)
T KOG2096|consen  295 TVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHS  373 (420)
T ss_pred             EEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhc
Confidence            999999999999752    1   112221    11223344799999999888664 4479999999998776665 578


Q ss_pred             cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        497 LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       497 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ..|           .++   +|+++|++++|++ |..+++
T Consensus       374 ~~I-----------s~i---s~~~~g~~~atcG-dr~vrv  398 (420)
T KOG2096|consen  374 TTI-----------SSI---SYSSDGKYIATCG-DRYVRV  398 (420)
T ss_pred             Cce-----------eeE---EecCCCcEEeeec-ceeeee
Confidence            888           888   9999999999986 667765

>KOG0646|consensus

Probab=99.92  E-value=1.2e-24  Score=190.87  Aligned_cols=281  Identities=15%  Similarity=0.147  Sum_probs=211.9

Q ss_pred             ceEEeeeccceehhhhcCCCcceEEEEE-eccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         77 SLLHYYETSAVKELYQHGLSSPLVRIVR-SSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~-s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      ..+.+||+.+|..+.++++......-.. .-.+.+++++.. ...|.+|.+...           .......--.+.|.+
T Consensus        18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~-----------~~~~q~~v~Pg~v~a   86 (476)
T KOG0646|consen   18 INCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKK-----------DQVVQYIVLPGPVHA   86 (476)
T ss_pred             cceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCch-----------hhhhhhcccccceee
Confidence            4499999999998888876522111111 112356666654 446889998762           222222234566888


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEe
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~  232 (537)
                      ++-+ +++.+|+.++-.++    +                 ++|.+       .++..+  +.     +|  -..|+|+ 
T Consensus        87 l~s~-n~G~~l~ag~i~g~----l-----------------YlWel-------ssG~LL~v~~-----aH--YQ~ITcL-  129 (476)
T KOG0646|consen   87 LASS-NLGYFLLAGTISGN----L-----------------YLWEL-------SSGILLNVLS-----AH--YQSITCL-  129 (476)
T ss_pred             eecC-CCceEEEeecccCc----E-----------------EEEEe-------ccccHHHHHH-----hh--ccceeEE-
Confidence            8888 77888877767777    9                 99999       999988  77     99  9999999 


Q ss_pred             ccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeee
Q psy10942        233 RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVL  312 (537)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~  312 (537)
                        .|+.||.+|++|+.||.|.  +|.+..                          ++....++        +.+.     
T Consensus       130 --~fs~dgs~iiTgskDg~V~--vW~l~~--------------------------lv~a~~~~--------~~~p-----  166 (476)
T KOG0646|consen  130 --KFSDDGSHIITGSKDGAVL--VWLLTD--------------------------LVSADNDH--------SVKP-----  166 (476)
T ss_pred             --EEeCCCcEEEecCCCccEE--EEEEEe--------------------------ecccccCC--------Cccc-----
Confidence              9999999999999999999  999876                          33343343        1111     


Q ss_pred             cccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        313 RGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       313 ~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      ...+..|.-+|+++...+.  ..++++++.|.++++||+. .+.++..+...                            
T Consensus       167 ~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS-~g~LLlti~fp----------------------------  217 (476)
T KOG0646|consen  167 LHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS-LGVLLLTITFP----------------------------  217 (476)
T ss_pred             eeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec-cceeeEEEecC----------------------------
Confidence            4456789999999988764  3578888888888888887 44443333321                            


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC----------------ceeeeEeecCC
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD----------------YVCLKSLEGHD  454 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~----------------~~~~~~~~~~~  454 (537)
                          .                  .+.+++.+|-++.+.+|+.+|.|.+.++..                +..+..+.+|.
T Consensus       218 ----~------------------si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~  275 (476)
T KOG0646|consen  218 ----S------------------SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHE  275 (476)
T ss_pred             ----C------------------cceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeecccc
Confidence                1                  788899999999999999999998887643                23456678898


Q ss_pred             c--ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        455 A--SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       455 ~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +  .|+|++.+-||.+|++|+.||.|+|||+.+.++++++....++|
T Consensus       276 ~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpV  322 (476)
T KOG0646|consen  276 NESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPV  322 (476)
T ss_pred             CCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhcccc
Confidence            8  89999999999999999999999999999999988887666777

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.92  E-value=9.1e-23  Score=188.74  Aligned_cols=294  Identities=10%  Similarity=0.048  Sum_probs=200.6

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS   96 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~   96 (537)
                      ..+++++.|+.|++||+++++.+..+.....+..+  .+.|.       +..++++++.++.|++||+.+++.+..+..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l--~~~~d-------g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~   72 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGI--TLSKD-------GKLLYVCASDSDTIQVIDLATGEVIGTLPSG   72 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCCCCCce--EECCC-------CCEEEEEECCCCeEEEEECCCCcEEEeccCC
Confidence            56889999999999999999988888765555556  55773       3344567778899999999998887766655


Q ss_pred             cceEEEEEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ..+..++|+|+++.++++ ..++.|++||+.+           .+.+..+..+ ..+.+++|+ +++..++++..+..  
T Consensus        73 ~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~-----------~~~~~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~--  137 (300)
T TIGR03866        73 PDPELFALHPNGKILYIANEDDNLVTVIDIET-----------RKVLAEIPVG-VEPEGMAVS-PDGKIVVNTSETTN--  137 (300)
T ss_pred             CCccEEEECCCCCEEEEEcCCCCeEEEEECCC-----------CeEEeEeeCC-CCcceEEEC-CCCCEEEEEecCCC--
Confidence            567789999999987665 4588999999988           5555555532 236789999 67777776655432  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeee-eccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~  253 (537)
                       .+                 ..||.       .+.+.. ..     ..  ...+.++   +|+|++++++ ++..++.+.
T Consensus       138 -~~-----------------~~~d~-------~~~~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~~~~~~~v~  182 (300)
T TIGR03866       138 -MA-----------------HFIDT-------KTYEIVDNV-----LV--DQRPRFA---EFTADGKELWVSSEIGGTVS  182 (300)
T ss_pred             -eE-----------------EEEeC-------CCCeEEEEE-----Ec--CCCccEE---EECCCCCEEEEEcCCCCEEE
Confidence             14                 45676       554443 11     12  2334677   8999998875 445678888


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +|++..+.                                .+..++.....         ..........++|+|+++
T Consensus       183 --i~d~~~~~--------------------------------~~~~~~~~~~~---------~~~~~~~~~~i~~s~dg~  219 (300)
T TIGR03866       183 --VIDVATRK--------------------------------VIKKITFEIPG---------VHPEAVQPVGIKLTKDGK  219 (300)
T ss_pred             --EEEcCcce--------------------------------eeeeeeecccc---------cccccCCccceEECCCCC
Confidence              88887631                                01111111000         000011234688999999


Q ss_pred             EEEEE-eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        334 LLASG-SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       334 ~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      +++++ +.++.+.+||+. ..+....+.. ..                                                
T Consensus       220 ~~~~~~~~~~~i~v~d~~-~~~~~~~~~~-~~------------------------------------------------  249 (300)
T TIGR03866       220 TAFVALGPANRVAVVDAK-TYEVLDYLLV-GQ------------------------------------------------  249 (300)
T ss_pred             EEEEEcCCCCeEEEEECC-CCcEEEEEEe-CC------------------------------------------------
Confidence            86554 445678888887 3333322210 00                                                


Q ss_pred             eeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        413 GGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                       .+.+++|+|++++|+++. .++.|.+||+.+++++..++.. ...+.++++|
T Consensus       250 -~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~  300 (300)
T TIGR03866       250 -RVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP  300 (300)
T ss_pred             -CcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence             567789999999998864 5899999999999999999854 5558888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1332|consensus

Probab=99.92  E-value=1.3e-24  Score=174.66  Aligned_cols=251  Identities=17%  Similarity=0.164  Sum_probs=183.0

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc--------eEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV--------ELLAS  290 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v--------~~l~~  290 (537)
                      .|  .+.|..+   ...--|++||+++.|++|+  |+..+...+ ...     +..+.+|.+  ..+        .+|++
T Consensus         9 ~H--~D~IHda---~lDyygkrlATcsSD~tVk--If~v~~n~~-s~l-----l~~L~Gh~GPVwqv~wahPk~G~iLAS   75 (299)
T KOG1332|consen    9 QH--EDMIHDA---QLDYYGKRLATCSSDGTVK--IFEVRNNGQ-SKL-----LAELTGHSGPVWKVAWAHPKFGTILAS   75 (299)
T ss_pred             hh--hhhhhHh---hhhhhcceeeeecCCccEE--EEEEcCCCC-cee-----eeEecCCCCCeeEEeecccccCcEeeE
Confidence            78  8888888   7888899999999999999  999988643 122     667778876  222        78999


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI  368 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l  368 (537)
                      ++.||.|.||.-++++-..   ......|...|++++|.|.  |-.|++++.||.|.+.+.+..+.-.            
T Consensus        76 csYDgkVIiWke~~g~w~k---~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~------------  140 (299)
T KOG1332|consen   76 CSYDGKVIIWKEENGRWTK---AYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWT------------  140 (299)
T ss_pred             eecCceEEEEecCCCchhh---hhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCcc------------
Confidence            9999999999998884321   3455689999999999985  5688999999999999988331100            


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC---CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD---ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-  444 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-  444 (537)
                                        ..+....|...+.++.+.|.   +..+-.++.      ..-+.|++|+.|..|+||+..++ 
T Consensus       141 ------------------t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~------~~~krlvSgGcDn~VkiW~~~~~~  196 (299)
T KOG1332|consen  141 ------------------TSKIVFAHEIGVNSVSWAPASAPGSLVDQGPA------AKVKRLVSGGCDNLVKIWKFDSDS  196 (299)
T ss_pred             ------------------chhhhhccccccceeeecCcCCCccccccCcc------cccceeeccCCccceeeeecCCcc
Confidence                              01112234443444444443   110000000      00157999999999999998874 


Q ss_pred             -eeeeEeecCCcceEEEEEecCC----CEEEEEeCCCcEEEEECCCC-e--eEEEecCCccceeccCCCCCCccccccce
Q psy10942        445 -VCLKSLEGHDASVLRCHFINKG----TQIVSTGADGLLKLWSIKTS-T--CVSTFDKHALKIRNSDSENDHKGFGLPRQ  516 (537)
Q Consensus       445 -~~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~v~vwd~~~~-~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  516 (537)
                       +.-.+|++|.+.|+.++|.|.-    .+||+++.||+|.||..+.. +  ....++.....+           +.+   
T Consensus       197 w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~-----------w~v---  262 (299)
T KOG1332|consen  197 WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVV-----------WRV---  262 (299)
T ss_pred             hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcce-----------EEE---
Confidence             3445689999999999999953    57999999999999986521 1  112333345667           888   


Q ss_pred             eeecCCCEEEEEeCCCCEEeC
Q psy10942        517 LCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       517 ~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +||+.|+.|++++.|+.|.+|
T Consensus       263 SWS~sGn~LaVs~GdNkvtlw  283 (299)
T KOG1332|consen  263 SWSLSGNILAVSGGDNKVTLW  283 (299)
T ss_pred             EEeccccEEEEecCCcEEEEE
Confidence            999999999999999999998

>KOG0294|consensus

Probab=99.92  E-value=1.5e-23  Score=174.76  Aligned_cols=235  Identities=14%  Similarity=0.114  Sum_probs=181.6

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEecccc--EEEEEeCCceE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKR--MYAVVTADHNI  120 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~--~la~~~~d~~i  120 (537)
                      +..+++++++            +++++++|+.|.+|++||+.+...+..+-.| +.|+++.|.++-.  .|++|+.||.|
T Consensus        42 H~~sitavAV------------s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i  109 (362)
T KOG0294|consen   42 HAGSITALAV------------SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI  109 (362)
T ss_pred             cccceeEEEe------------cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence            5566777766            7799999999999999999999988888766 7999999998876  89999999999


Q ss_pred             EEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHH
Q psy10942        121 SLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFER  200 (537)
Q Consensus       121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~  200 (537)
                      .+|+...           .+++..+++|.+.|+.++.+ |.+..-++.+++..    +                 ++||+
T Consensus       110 ~iw~~~~-----------W~~~~slK~H~~~Vt~lsiH-PS~KLALsVg~D~~----l-----------------r~WNL  156 (362)
T KOG0294|consen  110 IIWRVGS-----------WELLKSLKAHKGQVTDLSIH-PSGKLALSVGGDQV----L-----------------RTWNL  156 (362)
T ss_pred             EEEEcCC-----------eEEeeeecccccccceeEec-CCCceEEEEcCCce----e-----------------eeehh
Confidence            9999999           99999999999999999999 56666566666666    9                 99999


Q ss_pred             HHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeee
Q psy10942        201 ILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAF  279 (537)
Q Consensus       201 ~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~  279 (537)
                             -.++.- ..     .-  ......+   .|+|.|.+++.+..++ |-  +|.++....-.+.  ..+.+.+..
T Consensus       157 -------V~Gr~a~v~-----~L--~~~at~v---~w~~~Gd~F~v~~~~~-i~--i~q~d~A~v~~~i--~~~~r~l~~  214 (362)
T KOG0294|consen  157 -------VRGRVAFVL-----NL--KNKATLV---SWSPQGDHFVVSGRNK-ID--IYQLDNASVFREI--ENPKRILCA  214 (362)
T ss_pred             -------hcCccceee-----cc--CCcceee---EEcCCCCEEEEEeccE-EE--EEecccHhHhhhh--hccccceee
Confidence                   655544 11     11  2233447   8999999999888765 55  8888874321111  111111111


Q ss_pred             eeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE--cCCCCEEEEEeCCCcEEEEEccC
Q psy10942        280 YTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV--SPNDKLLASGSLDKTVKVWSTTG  351 (537)
Q Consensus       280 ~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~d~~i~i~d~~~  351 (537)
                      .. ..-..+++|..|+.|.+||.+....     ...+.+|...|.++.+  .|++.+|++++.||.|++||++.
T Consensus       215 ~~-l~~~~L~vG~d~~~i~~~D~ds~~~-----~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~  282 (362)
T KOG0294|consen  215 TF-LDGSELLVGGDNEWISLKDTDSDTP-----LTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDM  282 (362)
T ss_pred             ee-cCCceEEEecCCceEEEeccCCCcc-----ceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccc
Confidence            10 1116899999999999999998654     5567899999999985  46788999999999999999983

>KOG0294|consensus

Probab=99.92  E-value=8.4e-24  Score=176.34  Aligned_cols=269  Identities=16%  Similarity=0.211  Sum_probs=203.8

Q ss_pred             EEEEEeCCceEEEEecccccCcc-cccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCC
Q psy10942        110 MYAVVTADHNISLYRLNSETGLE-ERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANR  188 (537)
Q Consensus       110 ~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~  188 (537)
                      .|++|+....|.=+++....... ........+...+..|.+.+++++.+   +.++++++.+..    |          
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs---~~~~aSGssDet----I----------   65 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS---GPYVASGSSDET----I----------   65 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec---ceeEeccCCCCc----E----------
Confidence            36788888877777766532110 11111134466778899999999988   788888888887    9          


Q ss_pred             CcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCC--eeeeccCCCcceeccccccCCCc
Q psy10942        189 SHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEED--LFPRQSMEPSTLEELEKRKTYHF  264 (537)
Q Consensus       189 ~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~--~l~~~~~d~~i~~~iw~~~~~~~  264 (537)
                             +|||+       +.....  +-     .|  .+.|+++   .|.++-.  .|++|+.||.|.  +|+...   
T Consensus        66 -------~IYDm-------~k~~qlg~ll-----~H--agsitaL---~F~~~~S~shLlS~sdDG~i~--iw~~~~---  116 (362)
T KOG0294|consen   66 -------HIYDM-------RKRKQLGILL-----SH--AGSITAL---KFYPPLSKSHLLSGSDDGHII--IWRVGS---  116 (362)
T ss_pred             -------EEEec-------cchhhhccee-----cc--ccceEEE---EecCCcchhheeeecCCCcEE--EEEcCC---
Confidence                   99999       666655  66     79  9999999   8988764  677777777777  776655   


Q ss_pred             ccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy10942        265 PLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV  344 (537)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i  344 (537)
                                                              -..     ...+++|.+.|+.++.+|.+++-++.+.|+.+
T Consensus       117 ----------------------------------------W~~-----~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~l  151 (362)
T KOG0294|consen  117 ----------------------------------------WEL-----LKSLKAHKGQVTDLSIHPSGKLALSVGGDQVL  151 (362)
T ss_pred             ----------------------------------------eEE-----eeeecccccccceeEecCCCceEEEEcCCcee
Confidence                                                    211     45567899999999999999999999999999


Q ss_pred             EEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC
Q psy10942        345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD  424 (537)
Q Consensus       345 ~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~  424 (537)
                      ++||+- .++.-..+....                                                  ..+.+.|+|.|
T Consensus       152 r~WNLV-~Gr~a~v~~L~~--------------------------------------------------~at~v~w~~~G  180 (362)
T KOG0294|consen  152 RTWNLV-RGRVAFVLNLKN--------------------------------------------------KATLVSWSPQG  180 (362)
T ss_pred             eeehhh-cCccceeeccCC--------------------------------------------------cceeeEEcCCC
Confidence            999997 333222221111                                                  23347899999


Q ss_pred             CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCC
Q psy10942        425 RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDS  504 (537)
Q Consensus       425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~  504 (537)
                      .+++.+..+ .|-+|.+.+......+... ..+.++.|- ++..|++|++|+.|++||.++..+...+.+|...|     
T Consensus       181 d~F~v~~~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RV-----  252 (362)
T KOG0294|consen  181 DHFVVSGRN-KIDIYQLDNASVFREIENP-KRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRV-----  252 (362)
T ss_pred             CEEEEEecc-EEEEEecccHhHhhhhhcc-ccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhhe-----
Confidence            988888764 6999999887666665532 456666665 56689999999999999999999999999999999     


Q ss_pred             CCCCccccccceee--ecCCCEEEEEeCCCCEEeC
Q psy10942        505 ENDHKGFGLPRQLC--SRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       505 ~~~~~~~~~~~~~~--s~~~~~l~s~~~dg~i~vW  537 (537)
                            .++   .+  .|++.+|+|+|.||.|+||
T Consensus       253 ------K~i---~~~~~~~~~~lvTaSSDG~I~vW  278 (362)
T KOG0294|consen  253 ------KDI---ASYTNPEHEYLVTASSDGFIKVW  278 (362)
T ss_pred             ------eee---EEEecCCceEEEEeccCceEEEE
Confidence                  777   53  5778999999999999999

>KOG0639|consensus

Probab=99.92  E-value=4.5e-24  Score=188.71  Aligned_cols=266  Identities=16%  Similarity=0.234  Sum_probs=212.5

Q ss_pred             ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC-----Cc-----ceEEE
Q psy10942        220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-----GT-----VELLA  289 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----v~~l~  289 (537)
                      ..|  ..-|.++   ..|...+++++|+. |.|+  +||+.......      ++..+.....     .+     -+.|+
T Consensus       416 L~H--GEvVcAv---tIS~~trhVyTgGk-gcVK--VWdis~pg~k~------PvsqLdcl~rdnyiRSckL~pdgrtLi  481 (705)
T KOG0639|consen  416 LAH--GEVVCAV---TISNPTRHVYTGGK-GCVK--VWDISQPGNKS------PVSQLDCLNRDNYIRSCKLLPDGRTLI  481 (705)
T ss_pred             hcc--CcEEEEE---EecCCcceeEecCC-CeEE--EeeccCCCCCC------ccccccccCcccceeeeEecCCCceEE
Confidence            367  7778888   88988999999886 7799  99998752211      1222221111     01     16789


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-----
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----  364 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----  364 (537)
                      +|+.-.++.|||+.......   ...+....-...+++.+||.+..++++.||.|.|||+. ....++.+.+|++     
T Consensus       482 vGGeastlsiWDLAapTpri---kaeltssapaCyALa~spDakvcFsccsdGnI~vwDLh-nq~~VrqfqGhtDGascI  557 (705)
T KOG0639|consen  482 VGGEASTLSIWDLAAPTPRI---KAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCI  557 (705)
T ss_pred             eccccceeeeeeccCCCcch---hhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcc-cceeeecccCCCCCceeE
Confidence            99999999999998776432   23333334556789999999999999999999999999 8889999998876     


Q ss_pred             -----CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        365 -----GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW  439 (537)
Q Consensus       365 -----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~  439 (537)
                           |..|-+|+.|++||.||++++..+......+                  .|.++.++|++.++++|-.++.+.+.
T Consensus       558 dis~dGtklWTGGlDntvRcWDlregrqlqqhdF~S------------------QIfSLg~cP~~dWlavGMens~vevl  619 (705)
T KOG0639|consen  558 DISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSS------------------QIFSLGYCPTGDWLAVGMENSNVEVL  619 (705)
T ss_pred             EecCCCceeecCCCccceeehhhhhhhhhhhhhhhh------------------hheecccCCCccceeeecccCcEEEE
Confidence                 6778899999999999999998776665444                  78889999999999999999999998


Q ss_pred             ECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeee
Q psy10942        440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCS  519 (537)
Q Consensus       440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  519 (537)
                      ..... ....+.-|..-|.++.|.+-|+++++.+.|+.+..|...-|..+...+. ...|           .++   ..|
T Consensus       620 h~skp-~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE-~SsV-----------lsC---DIS  683 (705)
T KOG0639|consen  620 HTSKP-EKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSV-----------LSC---DIS  683 (705)
T ss_pred             ecCCc-cceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc-cCcc-----------eee---eec
Confidence            87653 4455666899999999999999999999999999999988887766544 3467           788   999


Q ss_pred             cCCCEEEEEeCCCCEEeC
Q psy10942        520 RNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       520 ~~~~~l~s~~~dg~i~vW  537 (537)
                      .|.++|+||+.|....||
T Consensus       684 ~ddkyIVTGSGdkkATVY  701 (705)
T KOG0639|consen  684 FDDKYIVTGSGDKKATVY  701 (705)
T ss_pred             cCceEEEecCCCcceEEE
Confidence            999999999999877664

>KOG0639|consensus

Probab=99.92  E-value=4.3e-24  Score=188.83  Aligned_cols=266  Identities=14%  Similarity=0.155  Sum_probs=211.3

Q ss_pred             CcEEEEEeCccceEEeeecccee---h---hhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVK---E---LYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~---~---~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                      ..++++|+| +|.|+|||+....   .   +-.+.....|.++.+.|||+.|++|++-.++.|||+...+         .
T Consensus       430 ~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapT---------p  499 (705)
T KOG0639|consen  430 PTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPT---------P  499 (705)
T ss_pred             CcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCC---------c
Confidence            558999999 7889999986532   1   2223333689999999999999999999999999998732         2


Q ss_pred             ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc
Q psy10942        140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT  217 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~  217 (537)
                      .+...+.......++++.+ +|.+..+++..++.    |                 .|||+       .....+  +.  
T Consensus       500 rikaeltssapaCyALa~s-pDakvcFsccsdGn----I-----------------~vwDL-------hnq~~Vrqfq--  548 (705)
T KOG0639|consen  500 RIKAELTSSAPACYALAIS-PDAKVCFSCCSDGN----I-----------------AVWDL-------HNQTLVRQFQ--  548 (705)
T ss_pred             chhhhcCCcchhhhhhhcC-CccceeeeeccCCc----E-----------------EEEEc-------ccceeeeccc--
Confidence            3334455445567889999 78888888888887    9                 99999       655554  88  


Q ss_pred             ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                         ||  .+.+.|+   ..++||..|-+|+-|.++|  .||++.+.+..                               
T Consensus       549 ---Gh--tDGascI---dis~dGtklWTGGlDntvR--cWDlregrqlq-------------------------------  587 (705)
T KOG0639|consen  549 ---GH--TDGASCI---DISKDGTKLWTGGLDNTVR--CWDLREGRQLQ-------------------------------  587 (705)
T ss_pred             ---CC--CCCceeE---EecCCCceeecCCCcccee--ehhhhhhhhhh-------------------------------
Confidence               99  9999999   9999999999999999999  88887732110                               


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcE
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLL  377 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i  377 (537)
                                        .....+.|.++.++|++.+|++|-.++.+.+......  ....+..|..             
T Consensus       588 ------------------qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp--~kyqlhlheS-------------  634 (705)
T KOG0639|consen  588 ------------------QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP--EKYQLHLHES-------------  634 (705)
T ss_pred             ------------------hhhhhhhheecccCCCccceeeecccCcEEEEecCCc--cceeeccccc-------------
Confidence                              1123456889999999999999999998888777622  2222222222             


Q ss_pred             EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcce
Q psy10942        378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV  457 (537)
Q Consensus       378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v  457 (537)
                                                          -|.++.|.+.|+++++.+.|+.+..|...-|..+...+ ....|
T Consensus       635 ------------------------------------cVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk-E~SsV  677 (705)
T KOG0639|consen  635 ------------------------------------CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSV  677 (705)
T ss_pred             ------------------------------------EEEEEEecccCceeeecCchhhhhhccCccccceeecc-ccCcc
Confidence                                                78889999999999999999999999999888888777 46789


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      .++..|.|.++++||+.|....||.+
T Consensus       678 lsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  678 LSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             eeeeeccCceEEEecCCCcceEEEEE
Confidence            99999999999999999998888875

>KOG0301|consensus

Probab=99.92  E-value=6.8e-23  Score=188.38  Aligned_cols=258  Identities=17%  Similarity=0.284  Sum_probs=203.4

Q ss_pred             EEEEEeCccceEEeeeccceehhhh--cCCC-cceEE-EEEec-cccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQ--HGLS-SPLVR-IVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~--~~~~-~~v~~-~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      -.+++++.||++++|+-...+.+..  +..+ +.|.. ++|-+ ++..|++|+.|.+|.+|...+           ..+.
T Consensus        26 ~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~-----------~~P~   94 (745)
T KOG0301|consen   26 VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQ-----------AEPL   94 (745)
T ss_pred             eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCC-----------CCch
Confidence            5799999999999999766555442  3322 44554 67764 455699999999999999999           7889


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccC
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGR  222 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h  222 (537)
                      ..+++|...|.++.-. .++. +++++-|..    +                 ++|..       ......+.     +|
T Consensus        95 ~~LkgH~snVC~ls~~-~~~~-~iSgSWD~T----a-----------------kvW~~-------~~l~~~l~-----gH  139 (745)
T KOG0301|consen   95 YTLKGHKSNVCSLSIG-EDGT-LISGSWDST----A-----------------KVWRI-------GELVYSLQ-----GH  139 (745)
T ss_pred             hhhhccccceeeeecC-CcCc-eEecccccc----e-----------------EEecc-------hhhhcccC-----Cc
Confidence            9999999999998865 4444 778888887    9                 99988       33333377     99


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        +..|.++   +.-|++ .+++|+.|.+|+  +|.-...                                        
T Consensus       140 --~asVWAv---~~l~e~-~~vTgsaDKtIk--lWk~~~~----------------------------------------  171 (745)
T KOG0301|consen  140 --TASVWAV---ASLPEN-TYVTGSADKTIK--LWKGGTL----------------------------------------  171 (745)
T ss_pred             --chheeee---eecCCC-cEEeccCcceee--eccCCch----------------------------------------
Confidence              9999999   888877 788888888888  8875431                                        


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                                ...+.+|.+-|+.+++-+++ .|++++.||.|++|++.  +..+..+.+|..                  
T Consensus       172 ----------l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~--ge~l~~~~ghtn------------------  220 (745)
T KOG0301|consen  172 ----------LKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLD--GEVLLEMHGHTN------------------  220 (745)
T ss_pred             ----------hhhhccchhheeeeEEecCC-CeEeecCCceEEEEecc--Cceeeeeeccce------------------
Confidence                      45567899999999999765 57888999999999996  445555555544                  


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~  462 (537)
                                                     -++++...+++..++++++|++++||+..  ++.+.+.-..-.|.++.+
T Consensus       221 -------------------------------~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~  267 (745)
T KOG0301|consen  221 -------------------------------FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKV  267 (745)
T ss_pred             -------------------------------EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEE
Confidence                                           66777777778899999999999999976  777888755558999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECC
Q psy10942        463 INKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      -++|. +++|+.||.||||..+
T Consensus       268 L~NgD-Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  268 LLNGD-IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             eeCCC-EEEeccCceEEEEEec
Confidence            88875 7888999999999875

>KOG2445|consensus

Probab=99.91  E-value=1.5e-22  Score=168.36  Aligned_cols=251  Identities=14%  Similarity=0.219  Sum_probs=185.0

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC--cc--------eEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG--TV--------ELLAS  290 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~v--------~~l~~  290 (537)
                      +|  .+-|.++   .|.+-|+++|+|+.|++++  +|+.........+     ......|.+.  .+        +.+++
T Consensus        11 ~h--~DlihdV---s~D~~GRRmAtCSsDq~vk--I~d~~~~s~~W~~-----Ts~Wrah~~Si~rV~WAhPEfGqvvA~   78 (361)
T KOG2445|consen   11 GH--KDLIHDV---SFDFYGRRMATCSSDQTVK--IWDSTSDSGTWSC-----TSSWRAHDGSIWRVVWAHPEFGQVVAT   78 (361)
T ss_pred             CC--cceeeee---eecccCceeeeccCCCcEE--EEeccCCCCceEE-----eeeEEecCCcEEEEEecCccccceEEE
Confidence            88  8999999   9999999999999999999  9998777666666     5555555551  11        78999


Q ss_pred             EeCCCeEEEEECCCCce----eeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCC
Q psy10942        291 GSLDKTVKVWSTTGGLK----LLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  364 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  364 (537)
                      ++.|+++.||.-.....    ..-.....+......|+++.|.|.  |-.|++++.||.++||+......          
T Consensus        79 cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~n----------  148 (361)
T KOG2445|consen   79 CSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMN----------  148 (361)
T ss_pred             EecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccc----------
Confidence            99999999998632111    011113456677889999999994  67899999999999999873221          


Q ss_pred             CCEEEEEcCCCcEEEEECCCCee--eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCC-----C
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTC--VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGD-----A  434 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~d-----g  434 (537)
                                  ++-|.+...-.  +.....+..                 +..|+.|+|.   ..+||+|+.+     +
T Consensus       149 ------------Ls~W~Lq~Ei~~~~~pp~~~~~-----------------~~~CvsWn~sr~~~p~iAvgs~e~a~~~~  199 (361)
T KOG2445|consen  149 ------------LSQWTLQHEIQNVIDPPGKNKQ-----------------PCFCVSWNPSRMHEPLIAVGSDEDAPHLN  199 (361)
T ss_pred             ------------cccchhhhhhhhccCCcccccC-----------------cceEEeeccccccCceEEEEcccCCcccc
Confidence                        11122211000  000001111                 4566777764   3678888765     4


Q ss_pred             cEEEEECCC----ceeeeEeecCCcceEEEEEecC----CCEEEEEeCCCcEEEEECCC--------------------C
Q psy10942        435 TIKLWCLTD----YVCLKSLEGHDASVLRCHFINK----GTQIVSTGADGLLKLWSIKT--------------------S  486 (537)
Q Consensus       435 ~i~i~d~~~----~~~~~~~~~~~~~v~~~~~s~~----~~~l~s~~~dg~v~vwd~~~--------------------~  486 (537)
                      .+.||....    ...+.++.+|..+|++++|.|+    -.+||+++.|| |+||.+..                    -
T Consensus       200 ~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v  278 (361)
T KOG2445|consen  200 KVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPV  278 (361)
T ss_pred             ceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccce
Confidence            788987654    4567788899999999999995    24799999999 99999862                    1


Q ss_pred             eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        487 TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       487 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +.+..+.+|.+.|           +.+   .|.-.|..|++.|+||.||+|
T Consensus       279 ~~vs~~~~H~~~V-----------Wrv---~wNmtGtiLsStGdDG~VRLW  315 (361)
T KOG2445|consen  279 EKVSELDDHNGEV-----------WRV---RWNMTGTILSSTGDDGCVRLW  315 (361)
T ss_pred             EEeeeccCCCCce-----------EEE---EEeeeeeEEeecCCCceeeeh
Confidence            3556678899999           999   999999999999999999999

>KOG0650|consensus

Probab=99.91  E-value=3.6e-23  Score=186.89  Aligned_cols=306  Identities=11%  Similarity=0.119  Sum_probs=214.4

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccE--EEEEeCCceEEEEecccccCcccccccccceeE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRM--YAVVTADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~--la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      .+.+|++|+.||+|++|.+.+|+++++....+.|.+++|+|.+..  ||++..+ .+.|.+..-+           ..+.
T Consensus       411 ~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~-~~~ivnp~~G-----------~~~e  478 (733)
T KOG0650|consen  411 SGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGE-CVLIVNPIFG-----------DRLE  478 (733)
T ss_pred             CcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecC-ceEEeCcccc-----------chhh
Confidence            678999999999999999999999999999999999999998764  5555544 4666665442           1110


Q ss_pred             EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCC
Q psy10942        144 QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRD  223 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~  223 (537)
                      .  +...   .+-++.++.         ......+                 ..|.-.... ..+.+-+..-     .| 
T Consensus       479 ~--~~t~---ell~~~~~~---------~~p~~~~-----------------~~W~~~~~~-e~~~~v~~~I-----~~-  520 (733)
T KOG0650|consen  479 V--GPTK---ELLASAPNE---------SEPDAAV-----------------VTWSRASLD-ELEKGVCIVI-----KH-  520 (733)
T ss_pred             h--cchh---hhhhcCCCc---------cCCcccc-----------------eeechhhhh-hhccceEEEE-----ec-
Confidence            0  0000   000110000         0000114                 455441000 0122223322     57 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                       ...|..+   .|+..|.||++...++.-+                                          .|.|+++.
T Consensus       521 -~k~i~~v---tWHrkGDYlatV~~~~~~~------------------------------------------~VliHQLS  554 (733)
T KOG0650|consen  521 -PKSIRQV---TWHRKGDYLATVMPDSGNK------------------------------------------SVLIHQLS  554 (733)
T ss_pred             -CCcccee---eeecCCceEEEeccCCCcc------------------------------------------eEEEEecc
Confidence             8999999   9999999999866554322                                          45566665


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                      ....     ...+....+.|.++.|+|...+|++++. ..|+|||+. .+..+..+...                     
T Consensus       555 K~~s-----Q~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~-kqelvKkL~tg---------------------  606 (733)
T KOG0650|consen  555 KRKS-----QSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLS-KQELVKKLLTG---------------------  606 (733)
T ss_pred             cccc-----cCchhhcCCceeEEEecCCCceEEEEec-cceEEEehh-HHHHHHHHhcC---------------------
Confidence            4443     2334445677999999999999998876 668999987 33333322211                     


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEE
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~  462 (537)
                                 ..                 .|..++.+|.|.-|+.|+.|+.+..+|+.- .++.++++.|...+++++|
T Consensus       607 -----------~k-----------------wiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~  658 (733)
T KOG0650|consen  607 -----------SK-----------------WISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAF  658 (733)
T ss_pred             -----------Ce-----------------eeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhh
Confidence                       11                 778888999999999999999999999875 4678889999999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECC------CC---eeEEEecCCccc----eeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        463 INKGTQIVSTGADGLLKLWSIK------TS---TCVSTFDKHALK----IRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~------~~---~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      ++.-.++++|+.||++.|+--.      ..   -++..+++|...    |           ..+   .|+|...+|++++
T Consensus       659 H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gV-----------Ld~---~wHP~qpWLfsAG  724 (733)
T KOG0650|consen  659 HKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGV-----------LDT---IWHPRQPWLFSAG  724 (733)
T ss_pred             ccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccce-----------Eee---cccCCCceEEecC
Confidence            9999999999999999998532      22   244677888654    5           566   8999999999999


Q ss_pred             CCCCEEeC
Q psy10942        530 WSPQVVVY  537 (537)
Q Consensus       530 ~dg~i~vW  537 (537)
                      .||+|++|
T Consensus       725 Ad~tirlf  732 (733)
T KOG0650|consen  725 ADGTIRLF  732 (733)
T ss_pred             CCceEEee
Confidence            99999998

>KOG4283|consensus

Probab=99.91  E-value=1.6e-23  Score=172.93  Aligned_cols=286  Identities=12%  Similarity=0.140  Sum_probs=215.5

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceee------------e--ec--cccccceeeeEeecCccccccCCc
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR------------S--YP--AYESLETCAVFHLSDETESKSGGK   67 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~------------~--~~--~~~~~~~~~~~~~~~~~~~~~~~~   67 (537)
                      .|+.|..-| -.|+++++|+.||.|.+||+++.....            .  .+  +.-.|+.+  .+.|.       +.
T Consensus        45 svNsL~id~-tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~--~WyP~-------Dt  114 (397)
T KOG4283|consen   45 SVNSLQIDL-TEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSA--IWYPI-------DT  114 (397)
T ss_pred             ccceeeecc-ccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeee--EEeee-------cC
Confidence            467777776 478999999999999999997643111            1  11  33455666  78887       77


Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEecccc---EEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKR---MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~---~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      -++.+++-|.+++|||..+.+....++.++.|.+-++||-..   ++|+|..+-.|++-|+..           +..-..
T Consensus       115 GmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S-----------Gs~sH~  183 (397)
T KOG4283|consen  115 GMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS-----------GSFSHT  183 (397)
T ss_pred             ceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC-----------Ccceee
Confidence            789999999999999999999999999999999999998554   688899999999999999           789999


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-ccc--c-------
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-SQQ--K-------  214 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-~~~--l-------  214 (537)
                      +.||.+.|.++.|+|..+-.|++++.++.    +                 ++||+       +.. .|.  +       
T Consensus       184 LsGHr~~vlaV~Wsp~~e~vLatgsaDg~----i-----------------rlWDi-------Rrasgcf~~lD~hn~k~  235 (397)
T KOG4283|consen  184 LSGHRDGVLAVEWSPSSEWVLATGSADGA----I-----------------RLWDI-------RRASGCFRVLDQHNTKR  235 (397)
T ss_pred             eccccCceEEEEeccCceeEEEecCCCce----E-----------------EEEEe-------ecccceeEEeecccCcc
Confidence            99999999999999766555666666655    9                 99988       221 111  0       


Q ss_pred             --cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---cccccceeeeeeC-CcceEE
Q psy10942        215 --HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---FVPEAEHGAFYTG-GTVELL  288 (537)
Q Consensus       215 --~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~-~~v~~l  288 (537)
                        ..+....|  .+.|..+   +|+.++.++++++.|..++  +|+...+.......   .......+..|.. .+-..+
T Consensus       236 ~p~~~~n~ah--~gkvngl---a~tSd~~~l~~~gtd~r~r--~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vf  308 (397)
T KOG4283|consen  236 PPILKTNTAH--YGKVNGL---AWTSDARYLASCGTDDRIR--VWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVF  308 (397)
T ss_pred             Cccccccccc--cceeeee---eecccchhhhhccCccceE--EeecccCcccccccccccccccccceEEEeecccceE
Confidence              01124578  8999999   9999999999999999999  99998875432220   0111112222221 111344


Q ss_pred             EEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       289 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      +.--.++.+.++++-.+..     ...+..|...|.|.++-|+-+.+.++..|+.|..|-..
T Consensus       309 v~~p~~~~lall~~~sgs~-----ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~  365 (397)
T KOG4283|consen  309 VLFPNDGSLALLNLLEGSF-----VRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSPA  365 (397)
T ss_pred             EEEecCCeEEEEEccCceE-----EEeeecccceeeEEeecCchhhhhccccCCcccccccc
Confidence            4444568888888888776     44557788889999999999999999999999999764

>KOG1963|consensus

Probab=99.90  E-value=1.2e-20  Score=178.93  Aligned_cols=443  Identities=12%  Similarity=0.159  Sum_probs=285.0

Q ss_pred             eeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce
Q psy10942          9 DVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV   87 (537)
Q Consensus         9 ~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~   87 (537)
                      .||  +|+++++....+ .|.||...+|+++..++ +..++..+  .+.|.     +.+..++++.+.+|.|++||...+
T Consensus        23 vfS--nD~k~l~~~~~~-~V~VyS~~Tg~~i~~l~~~~a~l~s~--~~~~~-----~~~~~~~~~~sl~G~I~vwd~~~~   92 (792)
T KOG1963|consen   23 VFS--NDAKFLFLCTGN-FVKVYSTATGECITSLEDHTAPLTSV--IVLPS-----SENANYLIVCSLDGTIRVWDWSDG   92 (792)
T ss_pred             ccc--cCCcEEEEeeCC-EEEEEecchHhhhhhcccccCcccee--eecCC-----CccceEEEEEecCccEEEecCCCc
Confidence            567  888888877654 59999999999999877 66777777  44553     113468889999999999999999


Q ss_pred             ehhhhcCCCcceEEEEEecc---ccEEEEEeCCceEEEEe---cccccCcccccccccceeEEeecchhh-------hhh
Q psy10942         88 KELYQHGLSSPLVRIVRSSV---KRMYAVVTADHNISLYR---LNSETGLEERPNKILKFRKQFVGFSDE-------ILD  154 (537)
Q Consensus        88 ~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------v~~  154 (537)
                      .++.++..+.++.++.+.|-   ...++..+.+. .++..   .+...    +  .....+.+...+...       -.+
T Consensus        93 ~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~-~~~~~~~s~~~~~----q--~~~~~~~t~~~~~~d~~~~~~~~~~  165 (792)
T KOG1963|consen   93 ELLKTFDNNLPVHALVYKPAQADISANVYVSVED-YSILTTFSKKLSK----Q--SSRFVLATFDSAKGDFLKEHQEPKS  165 (792)
T ss_pred             EEEEEEecCCceeEEEechhHhCccceeEeeccc-ceeeeeccccccc----c--eeeeEeeeccccchhhhhhhcCCcc
Confidence            99999998888888777541   11223222211 11111   11100    0  000111111111111       345


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEec
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~  233 (537)
                      +.++ +.+....++....     +                 .+|..       +..... .....-..|  ...+++.  
T Consensus       166 I~~~-~~ge~~~i~~~~~-----~-----------------~~~~v-------~~~~~~~~~~~~~~~H--tf~~t~~--  211 (792)
T KOG1963|consen  166 IVDN-NSGEFKGIVHMCK-----I-----------------HIYFV-------PKHTKHTSSRDITVHH--TFNITCV--  211 (792)
T ss_pred             EEEc-CCceEEEEEEeee-----E-----------------EEEEe-------cccceeeccchhhhhh--cccceeE--
Confidence            5566 4455444444443     3                 55555       321111 111111257  6678999  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc------eEEEEEeCCCeEEEEECCCC
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV------ELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v------~~l~~~~~d~~i~i~~~~~~  305 (537)
                       +++|+++++|++..||.|.  +|+--........     ...+.+|.+  .++      .++++|+.++.+.+|.+.++
T Consensus       212 -~~spn~~~~Aa~d~dGrI~--vw~d~~~~~~~~t-----~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~  283 (792)
T KOG1963|consen  212 -ALSPNERYLAAGDSDGRIL--VWRDFGSSDDSET-----CTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETG  283 (792)
T ss_pred             -EeccccceEEEeccCCcEE--EEecccccccccc-----ceEEEecccccceeEEecCCceEeecccceEEEEEeecCC
Confidence             9999999999999999999  9986542111122     445556644  222      68999999999999999998


Q ss_pred             ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC--------------------CceeeEEEEecCCC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG--------------------GLKLLNVLRGHKKG  365 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~--------------------~~~~~~~~~~~~~~  365 (537)
                      +      .+.++.-.++|..+.++||+.+.+....|+.|.+....+                    .......+...+..
T Consensus       284 ~------kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~  357 (792)
T KOG1963|consen  284 K------KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRT  357 (792)
T ss_pred             C------cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCC
Confidence            7      344566678999999999999999999999999987641                    01122334444556


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--------CC--c
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--------DA--T  435 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--------dg--~  435 (537)
                      +.++-.+..|.|.+||+.+...+..+..-     ....+ ++.....-+++.++.+..|.++++.-.        ||  .
T Consensus       358 ~~~vln~~~g~vQ~ydl~td~~i~~~~v~-----~~n~~-~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~  431 (792)
T KOG1963|consen  358 NSLVLNGHPGHVQFYDLYTDSTIYKLQVC-----DENYS-DGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVS  431 (792)
T ss_pred             CceeecCCCceEEEEeccccceeeeEEEE-----eeccc-CCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEE
Confidence            77788888999999999988776555311     11111 111122237788888888888888632        33  4


Q ss_pred             EEEEECCCc----eeeeEe-ecCCcceEEEEEec-CCC-EEEEEeCCCcEEEEECCCCe----------eEEEecCCccc
Q psy10942        436 IKLWCLTDY----VCLKSL-EGHDASVLRCHFIN-KGT-QIVSTGADGLLKLWSIKTST----------CVSTFDKHALK  498 (537)
Q Consensus       436 i~i~d~~~~----~~~~~~-~~~~~~v~~~~~s~-~~~-~l~s~~~dg~v~vwd~~~~~----------~~~~~~~~~~~  498 (537)
                      +++|-....    .+...+ ..|...+...++.+ ... ..++++.||.++||-+...+          +...-.-|..+
T Consensus       432 LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~  511 (792)
T KOG1963|consen  432 LKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTP  511 (792)
T ss_pred             EEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCc
Confidence            778865442    222222 45777766666654 333 79999999999999884322          11111125556


Q ss_pred             eeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        499 IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       499 i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +           +++   +|+.||..|+. +.|++|.+|
T Consensus       512 i-----------~a~---~fs~dGslla~-s~~~~Itiw  535 (792)
T KOG1963|consen  512 I-----------TAL---CFSQDGSLLAV-SFDDTITIW  535 (792)
T ss_pred             c-----------cch---hhcCCCcEEEE-ecCCEEEEe
Confidence            6           888   99999976654 578899988

>KOG0267|consensus

Probab=99.90  E-value=2.5e-24  Score=198.56  Aligned_cols=210  Identities=25%  Similarity=0.390  Sum_probs=186.8

Q ss_pred             ceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeE-------
Q psy10942        285 VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN-------  357 (537)
Q Consensus       285 v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~-------  357 (537)
                      .+.+++|+.|..+-+|.......     ...+.+|..+|.++.|+++..+|++|+.+|+|++||+. ..+.++       
T Consensus        40 ~r~~~~Gg~~~k~~L~~i~kp~~-----i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDle-eAk~vrtLtgh~~  113 (825)
T KOG0267|consen   40 SRSLVTGGEDEKVNLWAIGKPNA-----ITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLE-EAKIVRTLTGHLL  113 (825)
T ss_pred             ceeeccCCCceeeccccccCCch-----hheeeccCCcceeeecCcchhhhcccccCCceeeeehh-hhhhhhhhhcccc
Confidence            37889999999999999877655     33478999999999999999999999999999999998 544433       


Q ss_pred             ---EEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942        358 ---VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       358 ---~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  434 (537)
                         .+..|+-+.+.+.++.|..+.+||.+..-+...+.+|..                 .+..+.|+|+|++++.|++|.
T Consensus       114 ~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~-----------------vv~~l~lsP~Gr~v~~g~ed~  176 (825)
T KOG0267|consen  114 NITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR-----------------VVDVLRLSPDGRWVASGGEDN  176 (825)
T ss_pred             CcceeeeccceEEeccccccccceehhhhccCceeeecCCcc-----------------eeEEEeecCCCceeeccCCcc
Confidence               344666788999999999999999999999999988775                 678889999999999999999


Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      .++|||+..|+....|+.|.+.+.++.|+|..-++++|+.|+++++||+++-+.+.........|           .++ 
T Consensus       177 tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v-----------~~~-  244 (825)
T KOG0267|consen  177 TVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGV-----------RSL-  244 (825)
T ss_pred             eeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCc-----------eee-
Confidence            99999999999999999999999999999999999999999999999999999998888777788           888 


Q ss_pred             ceeeecCCCEEEEEeCC
Q psy10942        515 RQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~d  531 (537)
                        +|+|+++.+++|..+
T Consensus       245 --~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  245 --AFNPDGKIVLSGEQI  259 (825)
T ss_pred             --eecCCceeeecCchh
Confidence              999999999887544

>KOG1274|consensus

Probab=99.90  E-value=9.1e-22  Score=186.82  Aligned_cols=271  Identities=15%  Similarity=0.127  Sum_probs=204.2

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCC-CcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTY-HFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      +|  ....+.+   +|.|+|++|++++.||.|+  +|+.... ..|..............   .....|++++.+++|.+
T Consensus        11 ah--t~G~t~i---~~d~~gefi~tcgsdg~ir--~~~~~sd~e~P~ti~~~g~~v~~ia---~~s~~f~~~s~~~tv~~   80 (933)
T KOG1274|consen   11 AH--TGGLTLI---CYDPDGEFICTCGSDGDIR--KWKTNSDEEEPETIDISGELVSSIA---CYSNHFLTGSEQNTVLR   80 (933)
T ss_pred             hc--cCceEEE---EEcCCCCEEEEecCCCceE--EeecCCcccCCchhhccCceeEEEe---ecccceEEeeccceEEE
Confidence            67  8888999   9999999999999999999  9998775 22221110000000001   11158999999999999


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC---------ceeeEEEEecCCCCEEEE
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG---------LKLLNVLRGHKKGTQIVS  370 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~~~~l~~  370 (537)
                      |....++.     ...+....-++++++|+-+|++++.|+.|-.|++.++...         ..++..+..++.+++|++
T Consensus        81 y~fps~~~-----~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAv  155 (933)
T KOG1274|consen   81 YKFPSGEE-----DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAV  155 (933)
T ss_pred             eeCCCCCc-----cceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEE
Confidence            99998875     3345556788999999999999999999999999987632         234566777788999999


Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL  450 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  450 (537)
                      .+-||.|++||+.++.+..++.+-...         .....+..+..++|+|++..++....|+.|++|+...++....+
T Consensus       156 ss~dG~v~iw~~~~~~~~~tl~~v~k~---------n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~L  226 (933)
T KOG1274|consen  156 SSCDGKVQIWDLQDGILSKTLTGVDKD---------NEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKL  226 (933)
T ss_pred             EecCceEEEEEcccchhhhhcccCCcc---------ccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheee
Confidence            999999999999999887776543211         11111125678999999888888889999999999999988887


Q ss_pred             ec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        451 EG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       451 ~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      ..  +...+..+.|+|.|+|||+++.||.|.|||.++-+.    ......|           .++   +|.|+++.|-.-
T Consensus       227 r~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~V-----------c~~---aw~p~~n~it~~  288 (933)
T KOG1274|consen  227 RDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAV-----------CCE---AWKPNANAITLI  288 (933)
T ss_pred             cccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----cccccee-----------EEE---ecCCCCCeeEEE
Confidence            64  444589999999999999999999999999987222    1223355           555   898888866544


Q ss_pred             eCCCC
Q psy10942        529 GWSPQ  533 (537)
Q Consensus       529 ~~dg~  533 (537)
                      ..-|.
T Consensus       289 ~~~g~  293 (933)
T KOG1274|consen  289 TALGT  293 (933)
T ss_pred             eeccc
Confidence            44443

>KOG2055|consensus

Probab=99.90  E-value=1e-22  Score=178.37  Aligned_cols=288  Identities=14%  Similarity=0.139  Sum_probs=211.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCc--cceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS--RKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      ..|+|+.|+  |....|+++|-||.++||.++.  ...+..+. ...||..+  .+.|.       +...+++++....+
T Consensus       214 ~~I~sv~FH--p~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a--~f~p~-------G~~~i~~s~rrky~  282 (514)
T KOG2055|consen  214 GGITSVQFH--PTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKA--EFAPN-------GHSVIFTSGRRKYL  282 (514)
T ss_pred             CCceEEEec--CCCceEEEecCCCcEEEEEecCccChhheeeeeccCcccee--eecCC-------CceEEEecccceEE
Confidence            469999999  8889999999999999998754  33444444 45577777  55774       55599999999999


Q ss_pred             Eeeeccceehh--hhcCCCc--ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         80 HYYETSAVKEL--YQHGLSS--PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        80 ~~wd~~~~~~~--~~~~~~~--~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      +.||+++.+..  ..+.+.+  .+.....||++++||..+..|.|.+....+           .+.+..++- .+.|..+
T Consensus       283 ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT-----------~eli~s~Ki-eG~v~~~  350 (514)
T KOG2055|consen  283 YSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKT-----------KELITSFKI-EGVVSDF  350 (514)
T ss_pred             EEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhh-----------hhhhheeee-ccEEeeE
Confidence            99999988653  3333333  788889999999999999999999999999           788877773 5569999


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeE--EEEec
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTV--TLLER  233 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v--~~~~~  233 (537)
                      +|+ .++..|+++++.+.    |                 .+||+       ++..++-.+    .-  .+.|  +++  
T Consensus       351 ~fs-Sdsk~l~~~~~~Ge----V-----------------~v~nl-------~~~~~~~rf----~D--~G~v~gts~--  393 (514)
T KOG2055|consen  351 TFS-SDSKELLASGGTGE----V-----------------YVWNL-------RQNSCLHRF----VD--DGSVHGTSL--  393 (514)
T ss_pred             EEe-cCCcEEEEEcCCce----E-----------------EEEec-------CCcceEEEE----ee--cCccceeee--
Confidence            999 88888888877777    9                 99999       877776110    11  3444  345  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                       +.++++.+||+|+..|.+.  ||+.++...                                     -.+.++     .
T Consensus       394 -~~S~ng~ylA~GS~~GiVN--IYd~~s~~~-------------------------------------s~~PkP-----i  428 (514)
T KOG2055|consen  394 -CISLNGSYLATGSDSGIVN--IYDGNSCFA-------------------------------------STNPKP-----I  428 (514)
T ss_pred             -eecCCCceEEeccCcceEE--Eeccchhhc-------------------------------------cCCCCc-----h
Confidence             6678999999999999999  988766210                                     001111     2


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSL--DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      ..+..-...|++|+|+||.+.|+.++.  +..+++-.+. ...                                ....+
T Consensus       429 k~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvP-S~T--------------------------------VFsNf  475 (514)
T KOG2055|consen  429 KTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVP-SCT--------------------------------VFSNF  475 (514)
T ss_pred             hhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEecc-cee--------------------------------eeccC
Confidence            223344567999999999999998875  4456665554 211                                11111


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      .....++              +.++|++|||.+.+||.|..+|.+.+|.+.
T Consensus       476 P~~n~~v--------------g~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  476 PTSNTKV--------------GHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             CCCCCcc--------------cceEEEEecCCCceEEeecCCCceeeEeec
Confidence            1111111              278999999999999999999999999874

>KOG1332|consensus

Probab=99.90  E-value=2.5e-23  Score=167.31  Aligned_cols=253  Identities=18%  Similarity=0.205  Sum_probs=183.9

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc-cCCCccEEEeeecccc
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL-GEEDSHIVVASNEYLN  174 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~~~~~  174 (537)
                      .+.|..+...-.|+.||+++.|++|+|+.......        ..++.+|.||+++|..++|. |.-++.|++++.++. 
T Consensus        11 ~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~--------s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgk-   81 (299)
T KOG1332|consen   11 EDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ--------SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGK-   81 (299)
T ss_pred             hhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC--------ceeeeEecCCCCCeeEEeecccccCcEeeEeecCce-
Confidence            36788888888999999999999999999987421        36788999999999999996 446788888888887 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i  252 (537)
                         |                 .||..       +.++-. +..+...|  ...|.++   +|.|.  |-.|++++.||.|
T Consensus        82 ---V-----------------IiWke-------~~g~w~-k~~e~~~h--~~SVNsV---~wapheygl~LacasSDG~v  128 (299)
T KOG1332|consen   82 ---V-----------------IIWKE-------ENGRWT-KAYEHAAH--SASVNSV---AWAPHEYGLLLACASSDGKV  128 (299)
T ss_pred             ---E-----------------EEEec-------CCCchh-hhhhhhhh--cccceee---cccccccceEEEEeeCCCcE
Confidence               9                 89987       665333 11233389  9999999   88775  5789999999999


Q ss_pred             eeccccccCCCc-cccccc-ccc--cceee-----------eeeC-CcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        253 LEELEKRKTYHF-PLFGIF-VPE--AEHGA-----------FYTG-GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       253 ~~~iw~~~~~~~-~~~~~~-~~~--~~~~~-----------~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      .  +.+.+.... ...... -.+  .....           .+.. ..+..|++|+.|+.|+||+.....-..   ...+
T Consensus       129 s--vl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~---e~~l  203 (299)
T KOG1332|consen  129 S--VLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL---ERTL  203 (299)
T ss_pred             E--EEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhh---hhhh
Confidence            9  888776511 100000 000  00011           1111 122789999999999999999874322   4568


Q ss_pred             cccCCCeEEEEEcCCC----CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        317 KGHEKDINCVTVSPND----KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      .+|.+.|+.++|.|.-    ..+++++.||++.||..+.....-..                           +.+..| 
T Consensus       204 ~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~---------------------------tll~~f-  255 (299)
T KOG1332|consen  204 EGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKK---------------------------TLLEEF-  255 (299)
T ss_pred             hhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccc---------------------------cccccC-
Confidence            9999999999999954    47999999999999987622111110                           111111 


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                        ..                 .+..+.||+.|++|++++.|+.+.+|.-.
T Consensus       256 --~~-----------------~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  256 --PD-----------------VVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             --Cc-----------------ceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence              01                 68889999999999999999999999754

>KOG4283|consensus

Probab=99.89  E-value=5.8e-22  Score=163.85  Aligned_cols=307  Identities=16%  Similarity=0.185  Sum_probs=214.3

Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-----ccccccccc
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-----SQQKHNTER  219 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-----~~~l~~~~~  219 (537)
                      .+.|.+.|+++...+..+++++++..++.    +                 .+||+.....+...+     .|.+.....
T Consensus        39 ~r~HgGsvNsL~id~tegrymlSGgadgs----i-----------------~v~Dl~n~t~~e~s~li~k~~c~v~~~h~   97 (397)
T KOG4283|consen   39 VRPHGGSVNSLQIDLTEGRYMLSGGADGS----I-----------------AVFDLQNATDYEASGLIAKHKCIVAKQHE   97 (397)
T ss_pred             eccCCCccceeeeccccceEEeecCCCcc----E-----------------EEEEeccccchhhccceeheeeeccccCC
Confidence            34577889999998888899998888887    8                 889883222111111     111223344


Q ss_pred             ccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc----eEEEEEeCC
Q psy10942        220 LGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV----ELLASGSLD  294 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~l~~~~~d  294 (537)
                      .+|  .-.|..+   .|-| |...+.+++.|.+++  +||..+.+......+  +-.. ..|.-..+    .++++|..+
T Consensus        98 ~~H--ky~iss~---~WyP~DtGmFtssSFDhtlK--VWDtnTlQ~a~~F~m--e~~V-YshamSp~a~sHcLiA~gtr~  167 (397)
T KOG4283|consen   98 NGH--KYAISSA---IWYPIDTGMFTSSSFDHTLK--VWDTNTLQEAVDFKM--EGKV-YSHAMSPMAMSHCLIAAGTRD  167 (397)
T ss_pred             ccc--eeeeeee---EEeeecCceeecccccceEE--EeecccceeeEEeec--Ccee-ehhhcChhhhcceEEEEecCC
Confidence            578  8889999   8887 667888999999999  999998532211111  1111 11111111    688999999


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGA  373 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~  373 (537)
                      -.|++-|+.++..     ...+.+|.+.|.++.|+|... .|++|+.||.|++||++....+...+..|..         
T Consensus       168 ~~VrLCDi~SGs~-----sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~---------  233 (397)
T KOG4283|consen  168 VQVRLCDIASGSF-----SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT---------  233 (397)
T ss_pred             CcEEEEeccCCcc-----eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccC---------
Confidence            9999999999986     567799999999999999766 5788999999999999944455555555432         


Q ss_pred             CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee--
Q psy10942        374 DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE--  451 (537)
Q Consensus       374 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--  451 (537)
                               .....++.-..|.                 +.+..++|+.++.++++.+.|..+++|+..+|+....--  
T Consensus       234 ---------k~~p~~~~n~ah~-----------------gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~  287 (397)
T KOG4283|consen  234 ---------KRPPILKTNTAHY-----------------GKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGP  287 (397)
T ss_pred             ---------ccCcccccccccc-----------------ceeeeeeecccchhhhhccCccceEEeecccCccccccccc
Confidence                     0001111112233                 278899999999999999999999999998765322110  


Q ss_pred             -cCCcceEEEEE---ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        452 -GHDASVLRCHF---INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       452 -~~~~~v~~~~~---s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                       .|... ..+++   +.+...++---.++.+.++++-.|+.+..+..|-..+           .+.   ++-|+-+.+.+
T Consensus       288 ~~~n~~-~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i-----------~c~---~~~~~fq~~~t  352 (397)
T KOG4283|consen  288 IIHNQT-TSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRI-----------NCA---AYRPDFEQCFT  352 (397)
T ss_pred             cccccc-ccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeeccccee-----------eEE---eecCchhhhhc
Confidence             12111 11111   3334445555567899999999999999999997777           666   89999999999


Q ss_pred             EeCCCCEEeC
Q psy10942        528 GGWSPQVVVY  537 (537)
Q Consensus       528 ~~~dg~i~vW  537 (537)
                      ++.|+.+..|
T Consensus       353 g~~d~ni~~w  362 (397)
T KOG4283|consen  353 GDMNGNIYMW  362 (397)
T ss_pred             cccCCccccc
Confidence            9999998877

>KOG1274|consensus

Probab=99.89  E-value=7.1e-20  Score=174.13  Aligned_cols=272  Identities=15%  Similarity=0.169  Sum_probs=200.7

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCcc-ceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSR-KQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      -+.|+|.  ++|++|++++.||.|++|+..+- +....+. ..+.+.+++.            ...++++++.++.|.+|
T Consensus        16 ~t~i~~d--~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~------------~s~~f~~~s~~~tv~~y   81 (933)
T KOG1274|consen   16 LTLICYD--PDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC------------YSNHFLTGSEQNTVLRY   81 (933)
T ss_pred             eEEEEEc--CCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee------------cccceEEeeccceEEEe
Confidence            4678888  89999999999999999998776 5555665 6666666644            55689999999999999


Q ss_pred             eccceehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         83 ETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        83 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                      ...+++.-..+. ..-++..++|+-+|+++|.|+.|-.|++.+..+           ....+.+++|.++|.++.|+ |.
T Consensus        82 ~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D-----------~s~~~~lrgh~apVl~l~~~-p~  149 (933)
T KOG1274|consen   82 KFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD-----------SSQEKVLRGHDAPVLQLSYD-PK  149 (933)
T ss_pred             eCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccc-----------cchheeecccCCceeeeeEc-CC
Confidence            998876543332 224799999999999999999999999999998           67788999999999999999 88


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc-cccCCCcCeEEEEeccCccc
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE-RLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~-~~~h~~~~~v~~~~~~~~s~  238 (537)
                      +.+|++.+.++.    |                 ++||+       +.+.+.  +.... .........+..+   +|+|
T Consensus       150 ~~fLAvss~dG~----v-----------------~iw~~-------~~~~~~~tl~~v~k~n~~~~s~i~~~~---aW~P  198 (933)
T KOG1274|consen  150 GNFLAVSSCDGK----V-----------------QIWDL-------QDGILSKTLTGVDKDNEFILSRICTRL---AWHP  198 (933)
T ss_pred             CCEEEEEecCce----E-----------------EEEEc-------ccchhhhhcccCCccccccccceeeee---eecC
Confidence            899999888877    9                 99999       766665  32100 0011002345566   9999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC-CcceEEEEEeCCCeEEEEECCCCceeeeeeccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  317 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~  317 (537)
                      +|..++..+.|+.|.  +++..+...............+..-.- .+-.+|++++.+|.|.|||.++..      .   .
T Consensus       199 k~g~la~~~~d~~Vk--vy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~------~---~  267 (933)
T KOG1274|consen  199 KGGTLAVPPVDNTVK--VYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE------R---H  267 (933)
T ss_pred             CCCeEEeeccCCeEE--EEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch------h---c
Confidence            998999999999999  999888543332211111111111100 112799999999999999999832      1   3


Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTV  344 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i  344 (537)
                      .....|.+++|-|+.+.+-.-...|..
T Consensus       268 ~~~~~Vc~~aw~p~~n~it~~~~~g~~  294 (933)
T KOG1274|consen  268 EFKRAVCCEAWKPNANAITLITALGTL  294 (933)
T ss_pred             cccceeEEEecCCCCCeeEEEeecccc
Confidence            445789999999988765544444433

>KOG0269|consensus

Probab=99.89  E-value=7.2e-22  Score=183.93  Aligned_cols=266  Identities=20%  Similarity=0.323  Sum_probs=191.5

Q ss_pred             EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc-------eEEEEEeCCCeEEEE
Q psy10942        228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-------ELLASGSLDKTVKVW  300 (537)
Q Consensus       228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~l~~~~~d~~i~i~  300 (537)
                      ..++   ...++-..++.++.. .+.  ++.+........|........-.......|       ++|++++..|.|.+|
T Consensus        42 ~nAI---s~nr~~~qiv~AGrs-~lk--lyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vW  115 (839)
T KOG0269|consen   42 ANAI---SVNRDINQIVVAGRS-LLK--LYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVW  115 (839)
T ss_pred             cceE---eecCCcceeEEeccc-cee--eEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEE
Confidence            5556   667777777776653 455  666665444333322110111111111111       899999999999999


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEec----------C-CCCEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH----------K-KGTQI  368 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~-~~~~l  368 (537)
                      |+.....  ..+...+..|+..+.++.|++ ..++|++|++||.|++||++. .+-..++...          + .+..+
T Consensus       116 dlnk~~r--nk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-~~S~~t~~~nSESiRDV~fsp~~~~~F  192 (839)
T KOG0269|consen  116 DLNKSIR--NKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-KKSKSTFRSNSESIRDVKFSPGYGNKF  192 (839)
T ss_pred             ecCcccc--chhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-ccccccccccchhhhceeeccCCCceE
Confidence            9987311  111456789999999999998 457899999999999999993 3333333222          1 27889


Q ss_pred             EEEcCCCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee-
Q psy10942        369 VSTGADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC-  446 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-  446 (537)
                      +++...|.+++||++.. ++...+..|.+                 ++.++.|+|++.+||+|+.|++|+|||..+.+. 
T Consensus       193 ~s~~dsG~lqlWDlRqp~r~~~k~~AH~G-----------------pV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~  255 (839)
T KOG0269|consen  193 ASIHDSGYLQLWDLRQPDRCEKKLTAHNG-----------------PVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK  255 (839)
T ss_pred             EEecCCceEEEeeccCchhHHHHhhcccC-----------------ceEEEeecCCCceeeecCCCccEEEEeccCCCcc
Confidence            99999999999999875 56777888887                 788888999999999999999999999986443 


Q ss_pred             -eeEeecCCcceEEEEEecCCC-EEEEEeC--CCcEEEEECCCC-eeEEEecCCccceeccCCCCCCccccccceeeec-
Q psy10942        447 -LKSLEGHDASVLRCHFINKGT-QIVSTGA--DGLLKLWSIKTS-TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR-  520 (537)
Q Consensus       447 -~~~~~~~~~~v~~~~~s~~~~-~l~s~~~--dg~v~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-  520 (537)
                       +.++. ...+|.+++|-|... +||+++.  |..|+|||++.. -+..++..|.+.+           +.+   +|-. 
T Consensus       256 ~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~v-----------t~i---~W~~~  320 (839)
T KOG0269|consen  256 PKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSV-----------TGI---AWDSG  320 (839)
T ss_pred             ceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccc-----------cce---eccCC
Confidence             33443 356899999999755 5666654  788999999653 4557888999988           888   8854 


Q ss_pred             CCCEEEEEeCCCCE
Q psy10942        521 NSDCEYRGGWSPQV  534 (537)
Q Consensus       521 ~~~~l~s~~~dg~i  534 (537)
                      |-..|.+++.||.|
T Consensus       321 d~~~l~s~sKD~tv  334 (839)
T KOG0269|consen  321 DRINLWSCSKDGTV  334 (839)
T ss_pred             CceeeEeecCccHH
Confidence            45677889999876

>KOG0650|consensus

Probab=99.89  E-value=4.8e-22  Score=179.76  Aligned_cols=313  Identities=17%  Similarity=0.154  Sum_probs=225.2

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      -.|+||...  +.|.+|++|+.||+|+||.+.+|.+++++...+.|.++  .|.|..      +...|+++.... +.+-
T Consensus       401 g~Vr~iSvd--p~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~v--aw~P~~------~~~vLAvA~~~~-~~iv  469 (733)
T KOG0650|consen  401 GLVRSISVD--PSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSV--AWNPLS------DLCVLAVAVGEC-VLIV  469 (733)
T ss_pred             CeEEEEEec--CCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEE--EecCCC------CceeEEEEecCc-eEEe
Confidence            358899999  79999999999999999999999999999988999999  556642      555666665444 6676


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEE----eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVV----TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      +..-|..+......            ..|+.+    ..+..+..|.-......       ..-++..-.|...|..|.|+
T Consensus       470 np~~G~~~e~~~t~------------ell~~~~~~~~p~~~~~~W~~~~~~e~-------~~~v~~~I~~~k~i~~vtWH  530 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTK------------ELLASAPNESEPDAAVVTWSRASLDEL-------EKGVCIVIKHPKSIRQVTWH  530 (733)
T ss_pred             Cccccchhhhcchh------------hhhhcCCCccCCcccceeechhhhhhh-------ccceEEEEecCCccceeeee
Confidence            76555333222111            122222    23456778876542110       11134555688889999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCc
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                       ..+.+|++...++.+ ..|                 .|.++       .....+  +.     -.  .+.|.++   .|
T Consensus       531 -rkGDYlatV~~~~~~-~~V-----------------liHQL-------SK~~sQ~PF~-----ks--kG~vq~v---~F  574 (733)
T KOG0650|consen  531 -RKGDYLATVMPDSGN-KSV-----------------LIHQL-------SKRKSQSPFR-----KS--KGLVQRV---KF  574 (733)
T ss_pred             -cCCceEEEeccCCCc-ceE-----------------EEEec-------ccccccCchh-----hc--CCceeEE---Ee
Confidence             888999887765531 224                 55666       333333  33     33  5668888   89


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      +|...+|+.++.                                              ..|++||+.....     ...+
T Consensus       575 HPs~p~lfVaTq----------------------------------------------~~vRiYdL~kqel-----vKkL  603 (733)
T KOG0650|consen  575 HPSKPYLFVATQ----------------------------------------------RSVRIYDLSKQEL-----VKKL  603 (733)
T ss_pred             cCCCceEEEEec----------------------------------------------cceEEEehhHHHH-----HHHH
Confidence            988777766553                                              2455666554332     2333


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942        317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  396 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  396 (537)
                      ......|..++.+|.|..|+.++.|+.+..+|+.-..++.+.+..|.+                                
T Consensus       604 ~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~--------------------------------  651 (733)
T KOG0650|consen  604 LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEK--------------------------------  651 (733)
T ss_pred             hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhh--------------------------------
Confidence            444567899999999999999999999999999966677777777765                                


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC------C---ceeeeEeecCCcc----eEEEEEe
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT------D---YVCLKSLEGHDAS----VLRCHFI  463 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~------~---~~~~~~~~~~~~~----v~~~~~s  463 (537)
                                       .+.+++|++.-.++++|+.||++.|+.-.      .   --++..+++|...    |..+.|+
T Consensus       652 -----------------avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wH  714 (733)
T KOG0650|consen  652 -----------------AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWH  714 (733)
T ss_pred             -----------------hhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeeccc
Confidence                             78889999999999999999999998422      1   2356677888765    8999999


Q ss_pred             cCCCEEEEEeCCCcEEEE
Q psy10942        464 NKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       464 ~~~~~l~s~~~dg~v~vw  481 (537)
                      |...+|++++.||+|++|
T Consensus       715 P~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  715 PRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             CCCceEEecCCCceEEee
Confidence            999999999999999998

>KOG2445|consensus

Probab=99.88  E-value=1.7e-21  Score=162.10  Aligned_cols=279  Identities=16%  Similarity=0.248  Sum_probs=191.2

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC-CccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE-DSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~~~~~~  175 (537)
                      +-|+++.|.+.|+.+|+|+.|++|+|||...+.+.       ..+....+.|.+.|..+.|.+|. ++.+++++.++.  
T Consensus        14 DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~-------W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drt--   84 (361)
T KOG2445|consen   14 DLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGT-------WSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRT--   84 (361)
T ss_pred             ceeeeeeecccCceeeeccCCCcEEEEeccCCCCc-------eEEeeeEEecCCcEEEEEecCccccceEEEEecCCc--
Confidence            56999999999999999999999999997653322       66777889999999999998665 566677777777  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~  253 (537)
                        +                 .||.-. +......+..-.....+...  ...|+.+   .|.|.  |-.+|+++.||.+|
T Consensus        85 --v-----------------~iWEE~-~~~~~~~~~~Wv~~ttl~Ds--rssV~DV---~FaP~hlGLklA~~~aDG~lR  139 (361)
T KOG2445|consen   85 --V-----------------SIWEEQ-EKSEEAHGRRWVRRTTLVDS--RSSVTDV---KFAPKHLGLKLAAASADGILR  139 (361)
T ss_pred             --e-----------------eeeeec-ccccccccceeEEEEEeecC--CcceeEE---EecchhcceEEEEeccCcEEE
Confidence              8                 999762 11111111110222223366  7889999   99885  66888999999999


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--  331 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--  331 (537)
                        ||+..+.                                ..+.-|.+...-...   ......+..+..|+.|+|.  
T Consensus       140 --IYEA~dp--------------------------------~nLs~W~Lq~Ei~~~---~~pp~~~~~~~~CvsWn~sr~  182 (361)
T KOG2445|consen  140 --IYEAPDP--------------------------------MNLSQWTLQHEIQNV---IDPPGKNKQPCFCVSWNPSRM  182 (361)
T ss_pred             --EEecCCc--------------------------------cccccchhhhhhhhc---cCCcccccCcceEEeeccccc
Confidence              8887662                                234455554332110   2233446667789999873  


Q ss_pred             -CCEEEEEeCC-----CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        332 -DKLLASGSLD-----KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       332 -~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                       ..+|++|+.+     +.++||........                             -..+.++.++..         
T Consensus       183 ~~p~iAvgs~e~a~~~~~~~Iye~~e~~rK-----------------------------w~kva~L~d~~d---------  224 (361)
T KOG2445|consen  183 HEPLIAVGSDEDAPHLNKVKIYEYNENGRK-----------------------------WLKVAELPDHTD---------  224 (361)
T ss_pred             cCceEEEEcccCCccccceEEEEecCCcce-----------------------------eeeehhcCCCCC---------
Confidence             4578887765     35666665522211                             112233345555         


Q ss_pred             CCCceEEeeeeEEEEcCC----CCEEEEEeCCCcEEEEECCC--------------------ceeeeEeecCCcceEEEE
Q psy10942        406 DENQIITGGVWFVNFSPL----DRILISSSGDATIKLWCLTD--------------------YVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~d~~~--------------------~~~~~~~~~~~~~v~~~~  461 (537)
                              +|++++|.|+    -.+||+++.|| |+||++..                    -+.+..+.+|.+.|..+.
T Consensus       225 --------pI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~  295 (361)
T KOG2445|consen  225 --------PIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVR  295 (361)
T ss_pred             --------cceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEE
Confidence                    5566666664    35899999999 99999863                    134556778999999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCC---CeeEEEec
Q psy10942        462 FINKGTQIVSTGADGLLKLWSIKT---STCVSTFD  493 (537)
Q Consensus       462 ~s~~~~~l~s~~~dg~v~vwd~~~---~~~~~~~~  493 (537)
                      |+-.|..|++.+.||+||+|...-   .++...+.
T Consensus       296 wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~  330 (361)
T KOG2445|consen  296 WNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLK  330 (361)
T ss_pred             EeeeeeEEeecCCCceeeehhhhhhhhheeeeEEe
Confidence            999999999999999999998642   34444444

>KOG0321|consensus

Probab=99.88  E-value=5.6e-22  Score=180.68  Aligned_cols=304  Identities=19%  Similarity=0.220  Sum_probs=205.9

Q ss_pred             EEEEEec---cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942        100 VRIVRSS---VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus       100 ~~~~~s~---~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      .+..|++   ....||.+.+||.|.++|.....-     ..+....+....|.+.|..+.|. +.+..|+.++++..   
T Consensus        53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~f-----r~ee~~lk~~~aH~nAifDl~wa-pge~~lVsasGDsT---  123 (720)
T KOG0321|consen   53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVF-----RLEERQLKKPLAHKNAIFDLKWA-PGESLLVSASGDST---  123 (720)
T ss_pred             ccccccCCCCccceEEEecCCCceeeecchhhhc-----chhhhhhcccccccceeEeeccC-CCceeEEEccCCce---
Confidence            4456654   334699999999999999876211     11122235566799999999999 57778888888887   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCC-CeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~  254 (537)
                       +                 ++||+       ++..+. ..  .+.||  ...|.++   +|.|.. ..|++|+.||.+. 
T Consensus       124 -~-----------------r~Wdv-------k~s~l~G~~--~~~GH--~~SvkS~---cf~~~n~~vF~tGgRDg~il-  170 (720)
T KOG0321|consen  124 -I-----------------RPWDV-------KTSRLVGGR--LNLGH--TGSVKSE---CFMPTNPAVFCTGGRDGEIL-  170 (720)
T ss_pred             -e-----------------eeeee-------ccceeecce--eeccc--ccccchh---hhccCCCcceeeccCCCcEE-
Confidence             9                 99999       777766 21  23399  9999999   999965 5778999999999 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC----ceeeeeecccccccCCCeEE---EE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG----LKLLNVLRGHKKGHEKDINC---VT  327 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~~~~v~~---~~  327 (537)
                       |||++.........+                         ..+++...+.    ......-......+...|.+   +.
T Consensus       171 -lWD~R~n~~d~~e~~-------------------------~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv  224 (720)
T KOG0321|consen  171 -LWDCRCNGVDALEEF-------------------------DNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVV  224 (720)
T ss_pred             -EEEEeccchhhHHHH-------------------------hhhhhccccCCCCCCchhhccccccccccCceeeeeEEE
Confidence             999987431110000                         0011111111    00000001222344555555   55


Q ss_pred             EcCCCCEEEEEeC-CCcEEEEEccCCcee--------------------eEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        328 VSPNDKLLASGSL-DKTVKVWSTTGGLKL--------------------LNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       328 ~s~~~~~l~~~~~-d~~i~i~d~~~~~~~--------------------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      +..|...|++++. |+.|++||++.....                    +..+.....|.++++.+.|+.|++|++.+..
T Consensus       225 ~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s  304 (720)
T KOG0321|consen  225 LFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLS  304 (720)
T ss_pred             EEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccC
Confidence            6678889999887 999999999842111                    1122223347888888889999999998653


Q ss_pred             e--eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcceEEEEEe
Q psy10942        387 C--VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-VCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       387 ~--~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s  463 (537)
                      .  +..+.++...  .             .-..-..+||+.++++|+.|...++|.+.+. .....+.+|.-.|++++|.
T Consensus       305 ~sP~~~~sg~~~~--s-------------f~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~  369 (720)
T KOG0321|consen  305 ISPVAEFSGKLNS--S-------------FYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWL  369 (720)
T ss_pred             cCchhhccCcccc--e-------------eeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeec
Confidence            2  2222222110  0             1223457899999999999999999999874 4566778999999999998


Q ss_pred             cC-CCEEEEEeCCCcEEEEECCCC
Q psy10942        464 NK-GTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       464 ~~-~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      |. -.-++++++|..+++|++..+
T Consensus       370 pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  370 PSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             cccCCCceeeccCcceEEEeccCc
Confidence            83 335777799999999999654

>KOG1273|consensus

Probab=99.88  E-value=1.1e-21  Score=163.77  Aligned_cols=289  Identities=13%  Similarity=0.124  Sum_probs=203.3

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD  177 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~  177 (537)
                      .-.++.|++.|.+||+|..||.|.|||+.+           ....+.+.+|..+|.+++|+ ++++.|++++.+..    
T Consensus        25 ~a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-----------~~iar~lsaH~~pi~sl~WS-~dgr~LltsS~D~s----   88 (405)
T KOG1273|consen   25 LAECCQFSRWGDYLAVGCANGRVVIYDFDT-----------FRIARMLSAHVRPITSLCWS-RDGRKLLTSSRDWS----   88 (405)
T ss_pred             ccceEEeccCcceeeeeccCCcEEEEEccc-----------cchhhhhhccccceeEEEec-CCCCEeeeecCCce----
Confidence            378999999999999999999999999999           78888999999999999999 89999999999988    


Q ss_pred             ccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceec
Q psy10942        178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEE  255 (537)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~  255 (537)
                      +                 .+||+       ..+.+. --     ..  ..+|...   .|+|..+ ..+..-.+..-.  
T Consensus        89 i-----------------~lwDl-------~~gs~l~ri-----rf--~spv~~~---q~hp~k~n~~va~~~~~sp~--  132 (405)
T KOG1273|consen   89 I-----------------KLWDL-------LKGSPLKRI-----RF--DSPVWGA---QWHPRKRNKCVATIMEESPV--  132 (405)
T ss_pred             e-----------------EEEec-------cCCCceeEE-----Ec--cCcccee---eeccccCCeEEEEEecCCcE--
Confidence            9                 99999       777665 11     24  6788888   8888543 333222222232  


Q ss_pred             cccccCCCcccccccccccceeeeeeC-----CcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc-CCCeEEEEEc
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTG-----GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH-EKDINCVTVS  329 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s  329 (537)
                      +-++.++..  .+....+...+.....     ..-+++++|...|.+.++|..+.+....+     +.. ...|..+.++
T Consensus       133 vi~~s~~~h--~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~-----rits~~~IK~I~~s  205 (405)
T KOG1273|consen  133 VIDFSDPKH--SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASF-----RITSVQAIKQIIVS  205 (405)
T ss_pred             EEEecCCce--eeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeee-----eechheeeeEEEEe
Confidence            333332110  0100000000000000     11179999999999999999998764333     222 3678999999


Q ss_pred             CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      ..|+.|+..+.|..|+.|+++.-..                .+.++.+        ++..+++.-   |..+        
T Consensus       206 ~~g~~liiNtsDRvIR~ye~~di~~----------------~~r~~e~--------e~~~K~qDv---VNk~--------  250 (405)
T KOG1273|consen  206 RKGRFLIINTSDRVIRTYEISDIDD----------------EGRDGEV--------EPEHKLQDV---VNKL--------  250 (405)
T ss_pred             ccCcEEEEecCCceEEEEehhhhcc----------------cCccCCc--------ChhHHHHHH---Hhhh--------
Confidence            9999999999999999999872100                0001100        111111110   0000        


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCceeeeEeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        410 IITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKSLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                          .-.+++||.+|.|++.++. ...++||.-..|.+++.+.|.. .....+.|+|-...+++- ..|.++||....
T Consensus       251 ----~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~  323 (405)
T KOG1273|consen  251 ----QWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ  323 (405)
T ss_pred             ----hhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence                4567899999999988874 4579999999999999999877 557889999998888887 678999998644

>KOG1034|consensus

Probab=99.88  E-value=8.1e-22  Score=165.50  Aligned_cols=332  Identities=14%  Similarity=0.150  Sum_probs=221.2

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce---ehhhhcC---CCcceEEEEEecc----ccEEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV---KELYQHG---LSSPLVRIVRSSV----KRMYAV  113 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~---~~~~~~~---~~~~v~~~~~s~~----~~~la~  113 (537)
                      +..+|-.++|-...     ..+....++++| ...+.+|.....   +.++...   ..+....++|+-|    ..+||+
T Consensus        37 ~~~~I~gv~fN~~~-----~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~  110 (385)
T KOG1034|consen   37 HNKPIFGVAFNSFL-----GCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAA  110 (385)
T ss_pred             CCCccceeeeehhc-----CCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEe
Confidence            44566666443111     112335677777 556888876532   2333333   3357888888654    347999


Q ss_pred             EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942        114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW  193 (537)
Q Consensus       114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~  193 (537)
                      ++.-|.|+|.|+..           .++...+.+|...|+.+.|.|.+.+++++++.+..    |               
T Consensus       111 ~G~~GvIrVid~~~-----------~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~s----v---------------  160 (385)
T KOG1034|consen  111 GGYLGVIRVIDVVS-----------GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHS----V---------------  160 (385)
T ss_pred             ecceeEEEEEecch-----------hhhccceeccCccchhhhcCCCCCcEEEEecCCce----E---------------
Confidence            99999999999999           79999999999999999999888889999999888    9               


Q ss_pred             hHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc
Q psy10942        194 FDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE  273 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~  273 (537)
                        ++|++       ++..|+.-..-..||  .+.|.++   .|+++|.++++++.|..++  +|++...+.....     
T Consensus       161 --RlwnI-------~~~~Cv~VfGG~egH--rdeVLSv---D~~~~gd~i~ScGmDhslk--~W~l~~~~f~~~l-----  219 (385)
T KOG1034|consen  161 --RLWNI-------QTDVCVAVFGGVEGH--RDEVLSV---DFSLDGDRIASCGMDHSLK--LWRLNVKEFKNKL-----  219 (385)
T ss_pred             --EEEec-------cCCeEEEEecccccc--cCcEEEE---EEcCCCCeeeccCCcceEE--EEecChhHHhhhh-----
Confidence              99999       999988222233399  9999999   9999999999999999999  9999864322211     


Q ss_pred             cceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy10942        274 AEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL  353 (537)
Q Consensus       274 ~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  353 (537)
                      ............+-+-    .....+.+..           ....|...|.|+.|-  |+++++-+-++.|..|....-.
T Consensus       220 E~s~~~~~~~t~~pfp----t~~~~fp~fs-----------t~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~  282 (385)
T KOG1034|consen  220 ELSITYSPNKTTRPFP----TPKTHFPDFS-----------TTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLE  282 (385)
T ss_pred             hhhcccCCCCccCcCC----cccccccccc-----------ccccccchHHHHHHH--hhheeecccCceEEEEecchhh
Confidence            0011111110000000    0011111111           234688889999986  6789998888999999874122


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                      +.+.........                   -..+..+.-....++               ....+|+|-++.||.|...
T Consensus       283 e~~~~vkp~es~-------------------~Ti~~~~~~~~c~iW---------------firf~~d~~~~~la~gnq~  328 (385)
T KOG1034|consen  283 ESIHNVKPPESA-------------------TTILGEFDYPMCDIW---------------FIRFAFDPWQKMLALGNQS  328 (385)
T ss_pred             hhhhccCCCccc-------------------eeeeeEeccCccceE---------------EEEEeecHHHHHHhhccCC
Confidence            222211111100                   011222222222221               2224466778999999999


Q ss_pred             CcEEEEECCCceee--eEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        434 ATIKLWCLTDYVCL--KSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       434 g~i~i~d~~~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      |.|.+||++..++.  .++..  ....|...+|+.|+.+|+..++|++|.-||.
T Consensus       329 g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr  382 (385)
T KOG1034|consen  329 GKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR  382 (385)
T ss_pred             CcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence            99999999886552  22222  2346899999999999999999999999985

>KOG1273|consensus

Probab=99.87  E-value=5e-21  Score=159.85  Aligned_cols=279  Identities=13%  Similarity=0.081  Sum_probs=193.1

Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVT  229 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~  229 (537)
                      ..|+.|+ +.+.+|+++..++.    +                 .+||+       .+...-  +.     +|  ..+|.
T Consensus        26 a~~~~Fs-~~G~~lAvGc~nG~----v-----------------vI~D~-------~T~~iar~ls-----aH--~~pi~   69 (405)
T KOG1273|consen   26 AECCQFS-RWGDYLAVGCANGR----V-----------------VIYDF-------DTFRIARMLS-----AH--VRPIT   69 (405)
T ss_pred             cceEEec-cCcceeeeeccCCc----E-----------------EEEEc-------cccchhhhhh-----cc--cccee
Confidence            6889999 89999999998887    9                 99999       776654  77     99  99999


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      ++   +||+||+.|++++.|..+.  +||+..+....+..+..|+.....|+...-..+++-- +..-            
T Consensus        70 sl---~WS~dgr~LltsS~D~si~--lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~-~~sp------------  131 (405)
T KOG1273|consen   70 SL---CWSRDGRKLLTSSRDWSIK--LWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIM-EESP------------  131 (405)
T ss_pred             EE---EecCCCCEeeeecCCceeE--EEeccCCCceeEEEccCccceeeeccccCCeEEEEEe-cCCc------------
Confidence            99   9999999999999999999  9999998765555666666666666552211222111 1111            


Q ss_pred             eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        310 NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                                    .-+.|++--..++.-..|+....-.-.        ...++.|+++++|...|.+.++|..+.+++.
T Consensus       132 --------------~vi~~s~~~h~~Lp~d~d~dln~sas~--------~~fdr~g~yIitGtsKGkllv~~a~t~e~va  189 (405)
T KOG1273|consen  132 --------------VVIDFSDPKHSVLPKDDDGDLNSSASH--------GVFDRRGKYIITGTSKGKLLVYDAETLECVA  189 (405)
T ss_pred             --------------EEEEecCCceeeccCCCcccccccccc--------ccccCCCCEEEEecCcceEEEEecchheeee
Confidence                          122333211222222222221110000        0234556677777777777777777766665


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-------ce--eeeEeecC--CcceE
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-------YV--CLKSLEGH--DASVL  458 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-------~~--~~~~~~~~--~~~v~  458 (537)
                      .++....                ..|..+.++..|++|+.-+.|..|+.|+++.       ++  +.+.++.-  .-.=.
T Consensus       190 s~rits~----------------~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk  253 (405)
T KOG1273|consen  190 SFRITSV----------------QAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWK  253 (405)
T ss_pred             eeeechh----------------eeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhh
Confidence            5543320                1788899999999999999999999999863       11  11222210  11235


Q ss_pred             EEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEEecCCcc-ceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        459 RCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVSTFDKHAL-KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +++||.+|.|++.++. -..++||+-..|.+++.+.|..+ ..           ..+   .|+|-...|++. ..|.+++
T Consensus       254 ~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l-----------~DV---~whp~rp~i~si-~sg~v~i  318 (405)
T KOG1273|consen  254 KCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEEL-----------LDV---NWHPVRPIIASI-ASGVVYI  318 (405)
T ss_pred             heeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhhe-----------eec---ccccceeeeeec-cCCceEE
Confidence            7899999999987764 46799999999999999998774 44           567   999999999988 7899999


Q ss_pred             C
Q psy10942        537 Y  537 (537)
Q Consensus       537 W  537 (537)
                      |
T Consensus       319 w  319 (405)
T KOG1273|consen  319 W  319 (405)
T ss_pred             E
Confidence            8

>KOG1538|consensus

Probab=99.87  E-value=1.5e-19  Score=165.89  Aligned_cols=268  Identities=14%  Similarity=0.173  Sum_probs=192.9

Q ss_pred             ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEE
Q psy10942         45 YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLY  123 (537)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iw  123 (537)
                      .+.+..+  .+-|+       +..+++.++  ..+.+||...|..+.++++| +.|.+++|+.||+.+|+|+.|..|.+|
T Consensus        12 ~hci~d~--afkPD-------GsqL~lAAg--~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W   80 (1081)
T KOG1538|consen   12 EHCINDI--AFKPD-------GTQLILAAG--SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIW   80 (1081)
T ss_pred             ccchhee--EECCC-------CceEEEecC--CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEe
Confidence            3455566  56774       545555554  46999999999999999988 699999999999999999999999999


Q ss_pred             ecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942        124 RLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE  203 (537)
Q Consensus       124 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~  203 (537)
                      +..-.           ..+ . -.|.+.|.||.|+ |-...|++++-+.     +                 -+|..   
T Consensus        81 ~~klE-----------G~L-k-YSH~D~IQCMsFN-P~~h~LasCsLsd-----F-----------------glWS~---  121 (1081)
T KOG1538|consen   81 TSKLE-----------GIL-K-YSHNDAIQCMSFN-PITHQLASCSLSD-----F-----------------GLWSP---  121 (1081)
T ss_pred             ccccc-----------cee-e-eccCCeeeEeecC-chHHHhhhcchhh-----c-----------------cccCh---
Confidence            87651           222 1 3588999999999 6777777776544     6                 88988   


Q ss_pred             hhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---cccccceeeee
Q psy10942        204 AKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---FVPEAEHGAFY  280 (537)
Q Consensus       204 ~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---~~~~~~~~~~~  280 (537)
                          ......-.     ..  ...+.+.   +|..||++++.|-.+|+|.  +-+..........+   ...++..+...
T Consensus       122 ----~qK~V~K~-----ks--s~R~~~C---sWtnDGqylalG~~nGTIs--iRNk~gEek~~I~Rpgg~Nspiwsi~~~  185 (1081)
T KOG1538|consen  122 ----EQKSVSKH-----KS--SSRIICC---SWTNDGQYLALGMFNGTIS--IRNKNGEEKVKIERPGGSNSPIWSICWN  185 (1081)
T ss_pred             ----hhhhHHhh-----hh--heeEEEe---eecCCCcEEEEeccCceEE--eecCCCCcceEEeCCCCCCCCceEEEec
Confidence                44443322     22  5677888   9999999999999999998  76554422111110   11122233333


Q ss_pred             eC---CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC------
Q psy10942        281 TG---GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG------  351 (537)
Q Consensus       281 ~~---~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~------  351 (537)
                      +.   +....+++.....++.+|.+.....      ...+.-.-...|+.+.|+|.+++.|+.|+.+++|.-..      
T Consensus       186 p~sg~G~~di~aV~DW~qTLSFy~LsG~~I------gk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTv  259 (1081)
T KOG1538|consen  186 PSSGEGRNDILAVADWGQTLSFYQLSGKQI------GKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTV  259 (1081)
T ss_pred             CCCCCCccceEEEEeccceeEEEEecceee------cccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeec
Confidence            22   3337788888888888888876532      11122233457899999999999999999999997541      


Q ss_pred             --CceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        352 --GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       352 --~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                        ...-+-+...+|+++.++.|..||+|-.|++-.
T Consensus       260 g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~f  294 (1081)
T KOG1538|consen  260 GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIF  294 (1081)
T ss_pred             cccceeEEEEEEccCCceEEEEEccCeeehhhhHH
Confidence              233466778899999999999999999988754

>KOG2919|consensus

Probab=99.87  E-value=1.6e-20  Score=157.46  Aligned_cols=260  Identities=15%  Similarity=0.161  Sum_probs=193.2

Q ss_pred             CcccCCCeeeeccCCCcceeccccccCCCcccc---cccccccceeeeeeC----------------CcceEEEEEeCCC
Q psy10942        235 KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLF---GIFVPEAEHGAFYTG----------------GTVELLASGSLDK  295 (537)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~---~~~~~~~~~~~~~~~----------------~~v~~l~~~~~d~  295 (537)
                      .|+|||..|++-+.|..+.  +|++........   ....+....+....+                ....++++.+.+.
T Consensus        56 kWSPDGSciL~~sedn~l~--~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~  133 (406)
T KOG2919|consen   56 KWSPDGSCILSLSEDNCLN--CWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ  133 (406)
T ss_pred             eeCCCCceEEeecccCeee--EEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence            8999999999999999999  999865321111   000000111111111                1117899999999


Q ss_pred             eEEEEECCCCceeeeeecccccccCC---CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-----------------ee
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEK---DINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-----------------KL  355 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-----------------~~  355 (537)
                      -|++||.-+++.....   ..-.|..   ...+++|+|||..|++|. ..+|+++|+...+                 ..
T Consensus       134 PIh~wdaftG~lraSy---~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gi  209 (406)
T KOG2919|consen  134 PIHLWDAFTGKLRASY---RAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGI  209 (406)
T ss_pred             ceeeeeccccccccch---hhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccce
Confidence            9999999998752211   1112322   346899999999999875 5889999984222                 23


Q ss_pred             eEEEEecCC-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C
Q psy10942        356 LNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D  433 (537)
Q Consensus       356 ~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d  433 (537)
                      +..+..+|. ...++.++....+-||.-..+.++..+-+|..                 +|+.++|.++|+.|.+|.. |
T Consensus       210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~g-----------------GvThL~~~edGn~lfsGaRk~  272 (406)
T KOG2919|consen  210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGG-----------------GVTHLQWCEDGNKLFSGARKD  272 (406)
T ss_pred             eeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCC-----------------CeeeEEeccCcCeecccccCC
Confidence            455555655 44788889999999999999999998888887                 8888999999999998875 6


Q ss_pred             CcEEEEECCC-ceeeeEeecCCc-ceEEEEE--ecCCCEEEEEeCCCcEEEEECCC-CeeEEEecCCccceeccCCCCCC
Q psy10942        434 ATIKLWCLTD-YVCLKSLEGHDA-SVLRCHF--INKGTQIVSTGADGLLKLWSIKT-STCVSTFDKHALKIRNSDSENDH  508 (537)
Q Consensus       434 g~i~i~d~~~-~~~~~~~~~~~~-~v~~~~~--s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~i~~~~~~~~~  508 (537)
                      ..|..||++. ..++..+..|.+ .-..|-|  .|++++|++|+.||.|++||+++ |+....+..|...+         
T Consensus       273 dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~v---------  343 (406)
T KOG2919|consen  273 DKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTV---------  343 (406)
T ss_pred             CeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccc---------
Confidence            7899999986 567778877765 3334444  67899999999999999999998 77788888899888         


Q ss_pred             ccccccceeeecCCCEEEEEeCC
Q psy10942        509 KGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       509 ~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                        ..+   +++|--..+|+++..
T Consensus       344 --Ngv---slnP~mpilatssGq  361 (406)
T KOG2919|consen  344 --NGV---SLNPIMPILATSSGQ  361 (406)
T ss_pred             --cce---ecCcccceeeeccCc
Confidence              888   999998888887643

>KOG4497|consensus

Probab=99.87  E-value=6.6e-20  Score=154.16  Aligned_cols=379  Identities=13%  Similarity=0.082  Sum_probs=238.1

Q ss_pred             eeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEE-EeCccceEEeeeccc
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVL-AGGEKSLLHYYETSA   86 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~wd~~~   86 (537)
                      ..||  |+|++++++++- .+.|-|.++.+..+.+...+.|.-+  .+..        +..+++ .+..++.|.+|++..
T Consensus        14 c~fS--p~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yi--eW~a--------ds~~ilC~~yk~~~vqvwsl~Q   80 (447)
T KOG4497|consen   14 CSFS--PCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYI--EWKA--------DSCHILCVAYKDPKVQVWSLVQ   80 (447)
T ss_pred             eeEC--CCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhhe--eeec--------cceeeeeeeeccceEEEEEeec
Confidence            4678  999999999887 5889999999888877666666666  3444        444444 557788999999998


Q ss_pred             eehhhhcC-CCcceEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCcc
Q psy10942         87 VKELYQHG-LSSPLVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSH  164 (537)
Q Consensus        87 ~~~~~~~~-~~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  164 (537)
                      .+--..+. +.+.+.++.|||||+.|. +..-+-.|.+|++.+           .. ...++.....+..++|+ +++++
T Consensus        81 pew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t-----------~~-~~~~~~pK~~~kg~~f~-~dg~f  147 (447)
T KOG4497|consen   81 PEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNT-----------QK-GYLLPHPKTNVKGYAFH-PDGQF  147 (447)
T ss_pred             ceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecc-----------ce-eEEecccccCceeEEEC-CCCce
Confidence            77666655 457999999999997655 445588899999998           22 23344334457888999 88888


Q ss_pred             EEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeee
Q psy10942        165 IVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFP  244 (537)
Q Consensus       165 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~  244 (537)
                      .+.++...-    .                 ...++..-    +....+ +  ++.-.  +-..+.+   .|+|||..|+
T Consensus       148 ~ai~sRrDC----k-----------------dyv~i~~c----~~W~ll-~--~f~~d--T~Dltgi---eWsPdg~~la  194 (447)
T KOG4497|consen  148 CAILSRRDC----K-----------------DYVQISSC----KAWILL-K--EFKLD--TIDLTGI---EWSPDGNWLA  194 (447)
T ss_pred             eeeeecccH----H-----------------HHHHHHhh----HHHHHH-H--hcCCC--cccccCc---eECCCCcEEE
Confidence            888776533    2                 22222000    111111 1  00022  4556777   9999998887


Q ss_pred             eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        245 RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       245 ~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                                 +||.--.                                -.|..|...                 -.+.
T Consensus       195 -----------Vwd~~Le--------------------------------ykv~aYe~~-----------------lG~k  214 (447)
T KOG4497|consen  195 -----------VWDNVLE--------------------------------YKVYAYERG-----------------LGLK  214 (447)
T ss_pred             -----------Eecchhh--------------------------------heeeeeeec-----------------ccee
Confidence                       7775431                                123333322                 2367


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE----EecCCC------------CEE---EE-EcCCCcEEEEECCC
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL----RGHKKG------------TQI---VS-TGADGLLKLWSIKT  384 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~------------~~l---~~-~~~d~~i~i~d~~~  384 (537)
                      .++|+|.+++|++|+.|+.+++.+-- +.++...+    ..|...            ...   ++ .-.|-...+|....
T Consensus       215 ~v~wsP~~qflavGsyD~~lrvlnh~-tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se  293 (447)
T KOG4497|consen  215 FVEWSPCNQFLAVGSYDQMLRVLNHF-TWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESE  293 (447)
T ss_pred             EEEeccccceEEeeccchhhhhhcee-eeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccch
Confidence            88999999999999999999886643 22221111    111100            000   00 00011111111110


Q ss_pred             --------CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEEEEECCCceeeeEeecCC
Q psy10942        385 --------STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       385 --------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~  454 (537)
                              ...+..++....       -|+.+    .++.-++|++|..++++-...  +.+.+||++..+....+. ..
T Consensus       294 ~~YE~~~~pv~~~~lkp~tD-------~pnPk----~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk  361 (447)
T KOG4497|consen  294 TIYEQQMTPVKVHKLKPPTD-------FPNPK----CGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QK  361 (447)
T ss_pred             hhhhhhhcceeeecccCCCC-------CCCcc----cccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hc
Confidence                    000111110000       00110    167889999999999987543  579999999876655554 56


Q ss_pred             cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      .+|....|.|....|+.+.....+++|...-...+. .....-.|           ..+   .|..+|..++-.+.|-.
T Consensus       362 ~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~-vP~~GF~i-----------~~l---~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  362 HPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG-VPKKGFNI-----------QKL---QWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             cceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe-cCCCCcee-----------eeE---EecCCCcEEEEEcCCce
Confidence            789999999998889888878889999975433333 33333456           666   99999999998887753

>KOG4378|consensus

Probab=99.87  E-value=1.2e-20  Score=167.00  Aligned_cols=251  Identities=14%  Similarity=0.156  Sum_probs=194.1

Q ss_pred             cCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc------eEEEEEeCCCeE
Q psy10942        225 LKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV------ELLASGSLDKTV  297 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v------~~l~~~~~d~~i  297 (537)
                      ...+.++   .|+.... .+++.+.|..++  +|.-.........     .....+....|+      .++++|+..+.|
T Consensus        34 ~pg~~s~---~w~~~n~lvvas~~gdk~~~--~~~K~g~~~~Vp~-----~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~V  103 (673)
T KOG4378|consen   34 EPGDFSF---NWQRRNFLVVASMAGDKVMR--IKEKDGKTPEVPR-----VRKLTGDNAFCVACASQSLYEISGGQSGCV  103 (673)
T ss_pred             CCcceee---eccccceEEEeecCCceeEE--EecccCCCCccce-----eeccccchHHHHhhhhcceeeeccCcCcee
Confidence            3448888   8887664 334556678888  9987764211111     333334333343      789999999999


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC----------ceeeEEEEecCCC-C
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG----------LKLLNVLRGHKKG-T  366 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----------~~~~~~~~~~~~~-~  366 (537)
                      +|||++....     .+.+++|...|+++.++-...+|++++..|.|.|..+.+.          ++.++.+..++.. .
T Consensus       104 kiwdl~~kl~-----hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~  178 (673)
T KOG4378|consen  104 KIWDLRAKLI-----HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRF  178 (673)
T ss_pred             eehhhHHHHH-----hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccce
Confidence            9999995543     6778999999999999999999999999999999988732          3445566666554 4


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeee-ccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCc
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTF-DKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~  444 (537)
                      +|.+++.+|.|.+||+....++..+ +.|..                 +...++|+|.. .+|++.+.|..|.+||....
T Consensus       179 lL~~asd~G~VtlwDv~g~sp~~~~~~~HsA-----------------P~~gicfspsne~l~vsVG~Dkki~~yD~~s~  241 (673)
T KOG4378|consen  179 LLSIASDKGAVTLWDVQGMSPIFHASEAHSA-----------------PCRGICFSPSNEALLVSVGYDKKINIYDIRSQ  241 (673)
T ss_pred             eeEeeccCCeEEEEeccCCCcccchhhhccC-----------------CcCcceecCCccceEEEecccceEEEeecccc
Confidence            5678899999999999988877665 34554                 66778888865 57888899999999999987


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEEecCCccceeccCCCCCCccccccceeeecCC
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT-STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      .....+. ...+...++|+++|.+|+.|...|.|..||++. ..++..+..|...|           +++   +|-|.-
T Consensus       242 ~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sV-----------t~v---afq~s~  305 (673)
T KOG4378|consen  242 ASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASV-----------TRV---AFQPSP  305 (673)
T ss_pred             cccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccce-----------eEE---Eeeecc
Confidence            7766666 456889999999999999999999999999975 46778888999999           788   887664

>KOG4328|consensus

Probab=99.87  E-value=8.4e-21  Score=166.39  Aligned_cols=301  Identities=15%  Similarity=0.087  Sum_probs=201.0

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNT  217 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~  217 (537)
                      .......+-+.+.|++++|+|.....+ ++.++..  |.|                 -+||+       .+.+.. -...
T Consensus       176 ~~~~~v~kv~~~Rit~l~fHPt~~~~l-va~GdK~--G~V-----------------G~Wn~-------~~~~~d~d~v~  228 (498)
T KOG4328|consen  176 YRILNVAKVTDRRITSLAFHPTENRKL-VAVGDKG--GQV-----------------GLWNF-------GTQEKDKDGVY  228 (498)
T ss_pred             ceecceeEecccceEEEEecccCcceE-EEEccCC--CcE-----------------EEEec-------CCCCCccCceE
Confidence            444556777889999999996555343 2333333  559                 99999       422222 1111


Q ss_pred             ccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC-CcceEEEEEeCCC
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-GTVELLASGSLDK  295 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~d~  295 (537)
                      .+..|  ..+|.++   .|+|.. ..+++.++||+|+  +-|+.................+....- ..-..++.+..=|
T Consensus       229 ~f~~h--s~~Vs~l---~F~P~n~s~i~ssSyDGtiR--~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G  301 (498)
T KOG4328|consen  229 LFTPH--SGPVSGL---KFSPANTSQIYSSSYDGTIR--LQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG  301 (498)
T ss_pred             EeccC--Cccccce---EecCCChhheeeeccCceee--eeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc
Confidence            22389  9999999   999954 7899999999999  988887543222211100000110000 1114566677677


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                      ...+||.+++...    ...+.-|...|++++++|. ..+|++++.|++.+|||++. ......                
T Consensus       302 ~f~~iD~R~~~s~----~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~-l~~K~s----------------  360 (498)
T KOG4328|consen  302 NFNVIDLRTDGSE----YENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQ-LRGKAS----------------  360 (498)
T ss_pred             ceEEEEeecCCcc----chhhhhhhcccceeecCCCCchheeecccCcceeeeehhh-hcCCCC----------------
Confidence            9999999987653    2345668889999999994 56899999999999999982 111110                


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC----CceeeeEe
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT----DYVCLKSL  450 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~  450 (537)
                                  ++.....|..                 .|.+..|||++-.|++.+.|..|+|||..    ..++..++
T Consensus       361 ------------p~lst~~Hrr-----------------sV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I  411 (498)
T KOG4328|consen  361 ------------PFLSTLPHRR-----------------SVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI  411 (498)
T ss_pred             ------------cceecccccc-----------------eeeeeEEcCCCCceEeeccCCceEEeecccccccCCcccee
Confidence                        0111112222                 78889999998789999999999999983    34444444


Q ss_pred             ecCCc------ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc-ceeccCCCCCCccccccceeeecCCC
Q psy10942        451 EGHDA------SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL-KIRNSDSENDHKGFGLPRQLCSRNSD  523 (537)
Q Consensus       451 ~~~~~------~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~~~~  523 (537)
                      . |..      ......|.|+..++++|-.-..|-|+|-..++.+..+..... .|           .++  ..|+|-+.
T Consensus       412 ~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI-----------~~v--n~~HP~~~  477 (498)
T KOG4328|consen  412 P-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTI-----------PSV--NEFHPMRD  477 (498)
T ss_pred             e-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcccccc-----------ccc--eeeccccc
Confidence            4 322      234568999999999999988999999988887777644332 34           333  29999999


Q ss_pred             EEEE-EeCCCCEEeC
Q psy10942        524 CEYR-GGWSPQVVVY  537 (537)
Q Consensus       524 ~l~s-~~~dg~i~vW  537 (537)
                      .+++ ++..|.|.||
T Consensus       478 ~~~aG~~s~Gki~vf  492 (498)
T KOG4328|consen  478 TLAAGGNSSGKIYVF  492 (498)
T ss_pred             ceeccCCccceEEEE
Confidence            5555 4567778776

>KOG1538|consensus

Probab=99.86  E-value=1.2e-20  Score=172.91  Aligned_cols=272  Identities=13%  Similarity=0.171  Sum_probs=211.7

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..|..++|-|||..|+.+.. ..+.+||...           +.+++++++|.+.|++++|+ .++..+++++.+..   
T Consensus        13 hci~d~afkPDGsqL~lAAg-~rlliyD~nd-----------G~llqtLKgHKDtVycVAys-~dGkrFASG~aDK~---   76 (1081)
T KOG1538|consen   13 HCINDIAFKPDGTQLILAAG-SRLLVYDTSD-----------GTLLQPLKGHKDTVYCVAYA-KDGKRFASGSADKS---   76 (1081)
T ss_pred             cchheeEECCCCceEEEecC-CEEEEEeCCC-----------cccccccccccceEEEEEEc-cCCceeccCCCcee---
Confidence            47999999999999888765 4689999999           78899999999999999999 89999999999888   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecc
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEEL  256 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~i  256 (537)
                       +                 .+|+.       +-...+-.     .|  .+.|.|+   .|+|-...|++++-.. .-  +
T Consensus        77 -V-----------------I~W~~-------klEG~LkY-----SH--~D~IQCM---sFNP~~h~LasCsLsd-Fg--l  118 (1081)
T KOG1538|consen   77 -V-----------------IIWTS-------KLEGILKY-----SH--NDAIQCM---SFNPITHQLASCSLSD-FG--L  118 (1081)
T ss_pred             -E-----------------EEecc-------cccceeee-----cc--CCeeeEe---ecCchHHHhhhcchhh-cc--c
Confidence             8                 99987       43333333     68  9999999   9999999999988643 33  6


Q ss_pred             ccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE
Q psy10942        257 EKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA  336 (537)
Q Consensus       257 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  336 (537)
                      |......                                 |                 ........+.+++|..||++|+
T Consensus       119 WS~~qK~---------------------------------V-----------------~K~kss~R~~~CsWtnDGqyla  148 (1081)
T KOG1538|consen  119 WSPEQKS---------------------------------V-----------------SKHKSSSRIICCSWTNDGQYLA  148 (1081)
T ss_pred             cChhhhh---------------------------------H-----------------HhhhhheeEEEeeecCCCcEEE
Confidence            7665521                                 0                 0011234578999999999999


Q ss_pred             EEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942        337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW  416 (537)
Q Consensus       337 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~  416 (537)
                      .|-.||+|.+-+-. +.+.+..-+                              --+...                 +|+
T Consensus       149 lG~~nGTIsiRNk~-gEek~~I~R------------------------------pgg~Ns-----------------piw  180 (1081)
T KOG1538|consen  149 LGMFNGTISIRNKN-GEEKVKIER------------------------------PGGSNS-----------------PIW  180 (1081)
T ss_pred             EeccCceEEeecCC-CCcceEEeC------------------------------CCCCCC-----------------Cce
Confidence            99999999988665 222221111                              012233                 566


Q ss_pred             EEEEcCC-----CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        417 FVNFSPL-----DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       417 ~~~~s~~-----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      +++|+|.     ...+++.....++.+|.+. |+.+..-+.-.-...++.+.++|.++..|+.|+.+.+|. +.|-.+.+
T Consensus       181 si~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGT  258 (1081)
T KOG1538|consen  181 SICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGT  258 (1081)
T ss_pred             EEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEee
Confidence            6666664     2578888998999998875 455554444445567899999999999999999999997 57888888


Q ss_pred             ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +...+..|           +.+   +..|++++++.|+.||+|-.
T Consensus       259 vg~~D~WI-----------WtV---~~~PNsQ~v~~GCqDGTiAC  289 (1081)
T KOG1538|consen  259 VGEQDSWI-----------WTV---QAKPNSQYVVVGCQDGTIAC  289 (1081)
T ss_pred             ccccceeE-----------EEE---EEccCCceEEEEEccCeeeh
Confidence            88888899           999   99999999999999999854

>KOG4378|consensus

Probab=99.86  E-value=8.3e-20  Score=161.74  Aligned_cols=283  Identities=14%  Similarity=0.108  Sum_probs=198.8

Q ss_pred             ceEEeeeccceehhhhcCCC---cceEEEEEeccccEEEEE--eCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         77 SLLHYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVV--TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                      ..+++||....+...++-++   -.+.++.|+.... |+++  +.|..+++|.-....++       ...+..+.+.  .
T Consensus        12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~-------Vp~~~k~~gd--~   81 (673)
T KOG4378|consen   12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPE-------VPRVRKLTGD--N   81 (673)
T ss_pred             CceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCc-------cceeeccccc--h
Confidence            45899998876654444433   3589999987764 4444  45778899976652111       2233333333  3


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVT  229 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~  229 (537)
                      -.|++.. ....+++++...+.    |                 +|||+       +...+.  ++     +|  ...|+
T Consensus        82 ~~Cv~~~-s~S~y~~sgG~~~~----V-----------------kiwdl-------~~kl~hr~lk-----dh--~stvt  125 (673)
T KOG4378|consen   82 AFCVACA-SQSLYEISGGQSGC----V-----------------KIWDL-------RAKLIHRFLK-----DH--QSTVT  125 (673)
T ss_pred             HHHHhhh-hcceeeeccCcCce----e-----------------eehhh-------HHHHHhhhcc-----CC--cceeE
Confidence            3444443 22345555554444    8                 99999       755554  77     99  99999


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc--cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      ++   .|+-...+||+++..|.|.  +-.+.++.........  ...+.+..+.... .+|.+++.+|.|.+||+....+
T Consensus       126 ~v---~YN~~DeyiAsvs~gGdii--ih~~~t~~~tt~f~~~sgqsvRll~ys~skr-~lL~~asd~G~VtlwDv~g~sp  199 (673)
T KOG4378|consen  126 YV---DYNNTDEYIASVSDGGDII--IHGTKTKQKTTTFTIDSGQSVRLLRYSPSKR-FLLSIASDKGAVTLWDVQGMSP  199 (673)
T ss_pred             EE---EecCCcceeEEeccCCcEE--EEecccCccccceecCCCCeEEEeecccccc-eeeEeeccCCeEEEEeccCCCc
Confidence            99   9999999999999999999  8888775321111000  0011222222211 5788899999999999998776


Q ss_pred             eeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      .    ....+.|..+...|+|+|. ..+|++.+.|..|.+||.. ..+....+....                       
T Consensus       200 ~----~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~-s~~s~~~l~y~~-----------------------  251 (673)
T KOG4378|consen  200 I----FHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR-SQASTDRLTYSH-----------------------  251 (673)
T ss_pred             c----cchhhhccCCcCcceecCCccceEEEecccceEEEeecc-cccccceeeecC-----------------------
Confidence            4    3345789999999999994 5678888999999999998 433333332211                       


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecC
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                                                 +...++|+++|.+|+.|...|.|..||++. ..++..+..|...|++++|-|.
T Consensus       252 ---------------------------Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  252 ---------------------------PLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPS  304 (673)
T ss_pred             ---------------------------CcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeec
Confidence                                       788899999999999999999999999986 5678888999999999999876


Q ss_pred             C
Q psy10942        466 G  466 (537)
Q Consensus       466 ~  466 (537)
                      .
T Consensus       305 ~  305 (673)
T KOG4378|consen  305 P  305 (673)
T ss_pred             c
Confidence            4

>KOG0267|consensus

Probab=99.86  E-value=3.4e-22  Score=184.62  Aligned_cols=254  Identities=19%  Similarity=0.290  Sum_probs=202.7

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG  147 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  147 (537)
                      .++......-.+++||....-     .+...+.++..-..++.+++|+.|..+-+|.+..           ...+..+.+
T Consensus         5 ~~~m~~~~~t~Lr~~~~~~~~-----~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k-----------p~~i~S~~~   68 (825)
T KOG0267|consen    5 EFLMKTKRATKLRVWDTREFV-----AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK-----------PNAITSLTG   68 (825)
T ss_pred             cccceeeeeeccccccchhhh-----hhhhhhceeeeeccceeeccCCCceeeccccccC-----------Cchhheeec
Confidence            344444445567788865321     1223566666666778899999999999999887           455667999


Q ss_pred             chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCc
Q psy10942        148 FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDEL  225 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~  225 (537)
                      |...|.++.|+ .....|+.++.++.    |                 ++||+       +..+..  |.     ||  .
T Consensus        69 hespIeSl~f~-~~E~Llaagsasgt----i-----------------K~wDl-------eeAk~vrtLt-----gh--~  112 (825)
T KOG0267|consen   69 HESPIESLTFD-TSERLLAAGSASGT----I-----------------KVWDL-------EEAKIVRTLT-----GH--L  112 (825)
T ss_pred             cCCcceeeecC-cchhhhcccccCCc----e-----------------eeeeh-------hhhhhhhhhh-----cc--c
Confidence            99999999999 67777777777766    9                 99999       766655  77     99  9


Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                      ..+.++   .|+|-+.++++|+.|..+.  +||....                                |.++       
T Consensus       113 ~~~~sv---~f~P~~~~~a~gStdtd~~--iwD~Rk~--------------------------------Gc~~-------  148 (825)
T KOG0267|consen  113 LNITSV---DFHPYGEFFASGSTDTDLK--IWDIRKK--------------------------------GCSH-------  148 (825)
T ss_pred             cCccee---eeccceEEeccccccccce--ehhhhcc--------------------------------Ccee-------
Confidence            999999   9999999999999999999  9998851                                2222       


Q ss_pred             ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                               .+.+|...+..+.|+|+|++++.++.|..++|||+. .++....+..|..                     
T Consensus       149 ---------~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~-agk~~~ef~~~e~---------------------  197 (825)
T KOG0267|consen  149 ---------TYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT-AGKLSKEFKSHEG---------------------  197 (825)
T ss_pred             ---------eecCCcceeEEEeecCCCceeeccCCcceeeeeccc-ccccccccccccc---------------------
Confidence                     234577789999999999999999999999999987 5555555554433                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                                                  .+..+.|+|..-+++.|+.|+++++||+++.+.+...+.....|.+.+|+|+
T Consensus       198 ----------------------------~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~  249 (825)
T KOG0267|consen  198 ----------------------------KVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPD  249 (825)
T ss_pred             ----------------------------cccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCC
Confidence                                        6667778888889999999999999999999999888888889999999999


Q ss_pred             CCEEEEEeCCC
Q psy10942        466 GTQIVSTGADG  476 (537)
Q Consensus       466 ~~~l~s~~~dg  476 (537)
                      ++.+++|..+.
T Consensus       250 ~~~~~~G~q~s  260 (825)
T KOG0267|consen  250 GKIVLSGEQIS  260 (825)
T ss_pred             ceeeecCchhh
Confidence            99988886653

>KOG2919|consensus

Probab=99.85  E-value=3.2e-20  Score=155.66  Aligned_cols=270  Identities=15%  Similarity=0.083  Sum_probs=189.4

Q ss_pred             eeeeeccCCcceEEEecCcceEEEEEcCcc------------ceeeeeccccccceeeeEeecCccccccCCcEEEEEeC
Q psy10942          7 CFDVIPQITSEFSVHCGRDKVLFTWDLSSR------------KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         7 ~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      ...++  |||..|++-++|..+.+|++-..            ++...+...++.+....++-|. ..+.-.+..++++.+
T Consensus        54 gckWS--PDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~-M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   54 GCKWS--PDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSR-MKSDQPSTNLFAVSS  130 (406)
T ss_pred             cceeC--CCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeec-cccCCCccceeeecc
Confidence            34677  89999999999999999998321            1111222223333332243321 111122557888999


Q ss_pred             ccceEEeeeccceehhhhcCCC------cceEEEEEeccccEEEEEeCCceEEEEeccc-ccCcccccccccceeEE---
Q psy10942         75 EKSLLHYYETSAVKELYQHGLS------SPLVRIVRSSVKRMYAVVTADHNISLYRLNS-ETGLEERPNKILKFRKQ---  144 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~---  144 (537)
                      .+.-|++||.-+|+.......-      ..-.+++|+|||.+|.+|. .+.|+++|... +..        -....+   
T Consensus       131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~--------c~vy~t~~~  201 (406)
T KOG2919|consen  131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRD--------CPVYTTVTK  201 (406)
T ss_pred             ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCC--------Ccchhhhhc
Confidence            9999999999999987666543      2678999999999997755 58999999943 211        111111   


Q ss_pred             -eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc
Q psy10942        145 -FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG  221 (537)
Q Consensus       145 -~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~  221 (537)
                       -.+..+.+.+++|+|.+...+++++....    +                 -|+.-       ......  +.     +
T Consensus       202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~----~-----------------giy~~-------~~~~pl~llg-----g  248 (406)
T KOG2919|consen  202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQR----V-----------------GIYND-------DGRRPLQLLG-----G  248 (406)
T ss_pred             ccccccceeeeeeccCCCCcceeeecccce----e-----------------eeEec-------CCCCceeeec-----c
Confidence             12336678999999888888888887766    6                 55544       444444  77     9


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeC-----------CcceEEE
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-----------GTVELLA  289 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~l~  289 (537)
                      |  .+.|+.+   .|.++|+.|++|+. |..|.  .||++....+        +..+..|..           ..-+.|+
T Consensus       249 h--~gGvThL---~~~edGn~lfsGaRk~dkIl--~WDiR~~~~p--------v~~L~rhv~~TNQRI~FDld~~~~~La  313 (406)
T KOG2919|consen  249 H--GGGVTHL---QWCEDGNKLFSGARKDDKIL--CWDIRYSRDP--------VYALERHVGDTNQRILFDLDPKGEILA  313 (406)
T ss_pred             c--CCCeeeE---EeccCcCeecccccCCCeEE--EEeehhccch--------hhhhhhhccCccceEEEecCCCCceee
Confidence            9  9999999   99999999999876 67788  9999985443        333333333           2227899


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL  340 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  340 (537)
                      +|+.||.|++||+++....    ...+..|...++.++++|--.++++++.
T Consensus       314 sG~tdG~V~vwdlk~~gn~----~sv~~~~sd~vNgvslnP~mpilatssG  360 (406)
T KOG2919|consen  314 SGDTDGSVRVWDLKDLGNE----VSVTGNYSDTVNGVSLNPIMPILATSSG  360 (406)
T ss_pred             ccCCCccEEEEecCCCCCc----ccccccccccccceecCcccceeeeccC
Confidence            9999999999999883321    3345678889999999999888888764

>KOG0269|consensus

Probab=99.85  E-value=4.3e-21  Score=178.82  Aligned_cols=282  Identities=12%  Similarity=0.059  Sum_probs=201.9

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccc----eeeeecc--ccccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK----QLRSYPA--YESLETCAVFHLSDETESKSGGKTFVLAGGEK   76 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (537)
                      -..++|...  ++-..++.+|+.- +.++.+....    +......  .....+..+.+..-       ..++|+|++..
T Consensus        40 ~~~nAIs~n--r~~~qiv~AGrs~-lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~-------~~NlIAT~s~n  109 (839)
T KOG0269|consen   40 AKANAISVN--RDINQIVVAGRSL-LKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQL-------YSNLIATCSTN  109 (839)
T ss_pred             cccceEeec--CCcceeEEecccc-eeeEeeCcccCCcceeeecccccceeeehhhcccccc-------hhhhheeecCC
Confidence            345566677  6666677776643 7777664422    1112111  11112222244432       66899999999


Q ss_pred             ceEEeeeccc---eehhhhcCCC-cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         77 SLLHYYETSA---VKELYQHGLS-SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        77 ~~i~~wd~~~---~~~~~~~~~~-~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                      |.|.+||+..   .+.+..+..| ..+.++.|++-. .+|++|++||.|++||+..           ..-..++.+....
T Consensus       110 G~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-----------~~S~~t~~~nSES  178 (839)
T KOG0269|consen  110 GVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-----------KKSKSTFRSNSES  178 (839)
T ss_pred             CcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-----------ccccccccccchh
Confidence            9999999987   6677777766 489999998754 5789999999999999998           5667788888899


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTV  228 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v  228 (537)
                      |..+.|+|..+..++++..++.    +                 ++||+       +....-   +.     +|  .++|
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~----l-----------------qlWDl-------Rqp~r~~~k~~-----AH--~GpV  223 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGY----L-----------------QLWDL-------RQPDRCEKKLT-----AH--NGPV  223 (839)
T ss_pred             hhceeeccCCCceEEEecCCce----E-----------------EEeec-------cCchhHHHHhh-----cc--cCce
Confidence            9999999877777777766665    9                 99999       544433   66     99  9999


Q ss_pred             EEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc--ccccccceeeeeeCCcceEEEEEe--CCCeEEEEECCC
Q psy10942        229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG--IFVPEAEHGAFYTGGTVELLASGS--LDKTVKVWSTTG  304 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~l~~~~--~d~~i~i~~~~~  304 (537)
                      .|+   .|+|++.+||+|+.|+.++  +|+..+.......  ....++....+.+... ..|++++  .|-.|+|||+..
T Consensus       224 ~c~---nwhPnr~~lATGGRDK~vk--iWd~t~~~~~~~~tInTiapv~rVkWRP~~~-~hLAtcsmv~dtsV~VWDvrR  297 (839)
T KOG0269|consen  224 LCL---NWHPNREWLATGGRDKMVK--IWDMTDSRAKPKHTINTIAPVGRVKWRPARS-YHLATCSMVVDTSVHVWDVRR  297 (839)
T ss_pred             EEE---eecCCCceeeecCCCccEE--EEeccCCCccceeEEeecceeeeeeeccCcc-chhhhhhccccceEEEEeecc
Confidence            999   9999999999999999999  9999874322111  1112222333333322 4566654  577999999987


Q ss_pred             CceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcc
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~  350 (537)
                      .-.+    ...+..|...++.++|.. |...|.+++.||++..-..+
T Consensus       298 PYIP----~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~k  340 (839)
T KOG0269|consen  298 PYIP----YATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFK  340 (839)
T ss_pred             cccc----ceeeeccCccccceeccCCCceeeEeecCccHHHHhhhh
Confidence            7644    455788999999999975 55678899999988766555

>KOG0307|consensus

Probab=99.85  E-value=3.4e-21  Score=187.58  Aligned_cols=222  Identities=19%  Similarity=0.320  Sum_probs=178.2

Q ss_pred             eEEEEEeCCCeEEEEECCCC--ceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCCcee-------
Q psy10942        286 ELLASGSLDKTVKVWSTTGG--LKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKL-------  355 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~-------  355 (537)
                      ..++.|.+||.|.+||...-  ..... +......|.+.|..+.|++... +|++|+.||.|.|||+.....+       
T Consensus        81 GlIaGG~edG~I~ly~p~~~~~~~~~~-~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~  159 (1049)
T KOG0307|consen   81 GLIAGGLEDGNIVLYDPASIIANASEE-VLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA  159 (1049)
T ss_pred             ceeeccccCCceEEecchhhccCcchH-HHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC
Confidence            57999999999999998762  11111 2556788999999999999655 9999999999999999853222       


Q ss_pred             ----eEEEEecCC-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEE
Q psy10942        356 ----LNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILIS  429 (537)
Q Consensus       356 ----~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~  429 (537)
                          +..+..... ...|++++.+|++.+||++..+.+..+..+..+.               .+..++|+|+. ..+++
T Consensus       160 ~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~---------------~~S~l~WhP~~aTql~~  224 (1049)
T KOG0307|consen  160 PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRM---------------HCSVLAWHPDHATQLLV  224 (1049)
T ss_pred             CcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCcc---------------ceeeeeeCCCCceeeee
Confidence                223333322 5678889999999999999998888777665431               57778888886 45666


Q ss_pred             EeCC---CcEEEEECCC-ceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCC
Q psy10942        430 SSGD---ATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDS  504 (537)
Q Consensus       430 ~~~d---g~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~  504 (537)
                      ++.|   -.|.+||++. ..+++++++|...|.++.|++.+ .+|++++.|+.|.+|+.++++.+..+....+.+     
T Consensus       225 As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~-----  299 (1049)
T KOG0307|consen  225 ASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWC-----  299 (1049)
T ss_pred             ecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcce-----
Confidence            6554   3699999876 45778889999999999999955 899999999999999999999999999888888     


Q ss_pred             CCCCccccccceeeecCCC-EEEEEeCCCCEEeC
Q psy10942        505 ENDHKGFGLPRQLCSRNSD-CEYRGGWSPQVVVY  537 (537)
Q Consensus       505 ~~~~~~~~~~~~~~s~~~~-~l~s~~~dg~i~vW  537 (537)
                            +.+   .|+|... .++.++-||.|.|+
T Consensus       300 ------fdv---~w~pr~P~~~A~asfdgkI~I~  324 (1049)
T KOG0307|consen  300 ------FDV---QWCPRNPSVMAAASFDGKISIY  324 (1049)
T ss_pred             ------eee---eecCCCcchhhhheeccceeee
Confidence                  888   9999887 77778899999875

>KOG4328|consensus

Probab=99.85  E-value=8.9e-20  Score=160.02  Aligned_cols=297  Identities=12%  Similarity=0.093  Sum_probs=207.1

Q ss_pred             cceEEEEEecccc--EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         97 SPLVRIVRSSVKR--MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~~~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.|++++|.|..+  ++|+|..-|+|-+||+.+.++       ...-+..+..|..+|.++.|+|.+..++++.+.++. 
T Consensus       187 ~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~-------d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt-  258 (498)
T KOG4328|consen  187 RRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEK-------DKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT-  258 (498)
T ss_pred             cceEEEEecccCcceEEEEccCCCcEEEEecCCCCC-------ccCceEEeccCCccccceEecCCChhheeeeccCce-
Confidence            6899999999654  788888899999999964211       134466788899999999999989999999888877 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         |                 ++-|+       +.....  +..   ...  ...+.++   .|+.+...++.+..=|..
T Consensus       259 ---i-----------------R~~D~-------~~~i~e~v~s~---~~d--~~~fs~~---d~~~e~~~vl~~~~~G~f  303 (498)
T KOG4328|consen  259 ---I-----------------RLQDF-------EGNISEEVLSL---DTD--NIWFSSL---DFSAESRSVLFGDNVGNF  303 (498)
T ss_pred             ---e-----------------eeeee-------cchhhHHHhhc---Ccc--ceeeeec---cccCCCccEEEeecccce
Confidence               8                 77777       444333  220   023  5667778   899888888888877888


Q ss_pred             eeccccccCCCccccccccc--ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        253 LEELEKRKTYHFPLFGIFVP--EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .  +||.+.+..........  .+..+..++-. -.++++++.|++.+|||++.-...... .-....|...|.+..|||
T Consensus       304 ~--~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~-p~~laT~s~D~T~kIWD~R~l~~K~sp-~lst~~HrrsV~sAyFSP  379 (498)
T KOG4328|consen  304 N--VIDLRTDGSEYENLRLHKKKITSVALNPVC-PWFLATASLDQTAKIWDLRQLRGKASP-FLSTLPHRRSVNSAYFSP  379 (498)
T ss_pred             E--EEEeecCCccchhhhhhhcccceeecCCCC-chheeecccCcceeeeehhhhcCCCCc-ceecccccceeeeeEEcC
Confidence            8  99998865432221111  11112111111 168999999999999999865432211 123457899999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcc---CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        331 NDKLLASGSLDKTVKVWSTT---GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       331 ~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      .+..|++.+.|..|+|||..   ....+...+. |+.                  .+++-+                   
T Consensus       380 s~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~------------------~t~Rwl-------------------  421 (498)
T KOG4328|consen  380 SGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNN------------------RTGRWL-------------------  421 (498)
T ss_pred             CCCceEeeccCCceEEeecccccccCCccceee-ccC------------------cccccc-------------------
Confidence            98889999999999999984   1222222222 111                  111111                   


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc-ceEE-EEEecCCCEEEEE-eCCCcEEEEECC
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA-SVLR-CHFINKGTQIVST-GADGLLKLWSIK  484 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~-~~~s~~~~~l~s~-~~dg~v~vwd~~  484 (537)
                            ......|.|+..++++|..-..|-|+|-..++.+..+..... .|.+ ..|+|-+..+++| +..|.|+||.-+
T Consensus       422 ------T~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  422 ------TPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             ------cchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence                  345577999999999999989999999998887777654332 4444 4789987745555 557888988643

>KOG0302|consensus

Probab=99.85  E-value=5.1e-20  Score=157.60  Aligned_cols=257  Identities=20%  Similarity=0.253  Sum_probs=177.3

Q ss_pred             cceEEEEEeccc--cEEEEEeCCceEEEEecccccC-----cccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         97 SPLVRIVRSSVK--RMYAVVTADHNISLYRLNSETG-----LEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        97 ~~v~~~~~s~~~--~~la~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      +.+..+.-++-+  .+.|+-+..|.|.||++.....     ....+....+.+.++.+|...=+.++|||.....|+++.
T Consensus       152 g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGD  231 (440)
T KOG0302|consen  152 GGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGD  231 (440)
T ss_pred             cccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCc
Confidence            566666666554  4566777899999999864211     112233456778899999998999999975556566555


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC-CeeeeccC
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSM  248 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~  248 (537)
                      ....    |                 ++|..       .++.-.+...++.+|  ...|..+   +|||.. ..|++|+-
T Consensus       232 c~~~----I-----------------~lw~~-------~~g~W~vd~~Pf~gH--~~SVEDL---qWSptE~~vfaScS~  278 (440)
T KOG0302|consen  232 CVKG----I-----------------HLWEP-------STGSWKVDQRPFTGH--TKSVEDL---QWSPTEDGVFASCSC  278 (440)
T ss_pred             cccc----e-----------------Eeeee-------ccCceeecCcccccc--ccchhhh---ccCCccCceEEeeec
Confidence            5455    8                 99988       666555444455599  9999999   999965 46667777


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      ||+|+  |||++.+.                                           ...   ....+.|.+.|+.|.|
T Consensus       279 DgsIr--IWDiRs~~-------------------------------------------~~~---~~~~kAh~sDVNVISW  310 (440)
T KOG0302|consen  279 DGSIR--IWDIRSGP-------------------------------------------KKA---AVSTKAHNSDVNVISW  310 (440)
T ss_pred             CceEE--EEEecCCC-------------------------------------------ccc---eeEeeccCCceeeEEc
Confidence            77777  77766631                                           111   1112578889999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      +....+|++|+.||+++|||++.                              +..++++..|..|..            
T Consensus       311 nr~~~lLasG~DdGt~~iwDLR~------------------------------~~~~~pVA~fk~Hk~------------  348 (440)
T KOG0302|consen  311 NRREPLLASGGDDGTLSIWDLRQ------------------------------FKSGQPVATFKYHKA------------  348 (440)
T ss_pred             cCCcceeeecCCCceEEEEEhhh------------------------------ccCCCcceeEEeccC------------
Confidence            99888999999999999999982                              122334444444544            


Q ss_pred             ceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCCce----------------eeeEeecC--CcceEEEEEecC-CCE
Q psy10942        409 QIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTDYV----------------CLKSLEGH--DASVLRCHFINK-GTQ  468 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~----------------~~~~~~~~--~~~v~~~~~s~~-~~~  468 (537)
                           +|+++.|+|. ...|++++.|.+|.+||+..-.                +.+.+--|  ...+..+.|+++ ..+
T Consensus       349 -----pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~  423 (440)
T KOG0302|consen  349 -----PITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGL  423 (440)
T ss_pred             -----CeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCe
Confidence                 7777777775 4678888999999999985310                11122224  345888999985 447


Q ss_pred             EEEEeCCCcEEEEE
Q psy10942        469 IVSTGADGLLKLWS  482 (537)
Q Consensus       469 l~s~~~dg~v~vwd  482 (537)
                      |++.+.|| +.||.
T Consensus       424 lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  424 LVSTAIDG-FNVFK  436 (440)
T ss_pred             EEEecccc-eeEEE
Confidence            88888888 45553

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.85  E-value=8.1e-18  Score=164.67  Aligned_cols=364  Identities=24%  Similarity=0.365  Sum_probs=253.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccc-eeeeecccc--ccceeeeEeecCccccccCCcEEEEEe-Cccce
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK-QLRSYPAYE--SLETCAVFHLSDETESKSGGKTFVLAG-GEKSL   78 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   78 (537)
                      ..|.++.|.  +++..++.++.++.+.+|+...+. .+..+....  .+....+. .+.       ...+++.. ..++.
T Consensus        66 ~~i~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~d~~  135 (466)
T COG2319          66 DSITSIAFS--PDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALS-SPD-------GNSILLASSSLDGT  135 (466)
T ss_pred             ceEEEEEEC--CCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEE-CCC-------cceEEeccCCCCcc
Confidence            467888899  889999999999999999998887 555555322  44545333 453       22245554 44999


Q ss_pred             EEeeeccc-eehhhhcCCC-cceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         79 LHYYETSA-VKELYQHGLS-SPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        79 i~~wd~~~-~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      +.+|+... ......+..+ +.|..++|+|++.+++.++. |+.+++|+...           ......+.+|...+.++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~  204 (466)
T COG2319         136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT-----------GKPLSTLAGHTDPVSSL  204 (466)
T ss_pred             EEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC-----------CceEEeeccCCCceEEE
Confidence            99999998 5666655544 68999999999999888886 99999999998           67788888899999999


Q ss_pred             hcccCCCccEEEe-eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEecc
Q psy10942        156 ALLGEEDSHIVVA-SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERG  234 (537)
Q Consensus       156 ~~~~~~~~~l~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~  234 (537)
                      +|+ +++..++++ +.++.    +                 ++||.       ..+.....  .+.+|  .... ..   
T Consensus       205 ~~~-~~~~~~~~~~~~d~~----i-----------------~~wd~-------~~~~~~~~--~~~~~--~~~~-~~---  247 (466)
T COG2319         205 AFS-PDGGLLIASGSSDGT----I-----------------RLWDL-------STGKLLRS--TLSGH--SDSV-VS---  247 (466)
T ss_pred             EEc-CCcceEEEEecCCCc----E-----------------EEEEC-------CCCcEEee--ecCCC--Ccce-eE---
Confidence            999 666533333 44444    8                 88876       43332210  12267  5554 43   


Q ss_pred             CcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        235 KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      .|+|++..+++++.|+.++  +|+.....                                           ...   . 
T Consensus       248 ~~~~~~~~~~~~~~d~~~~--~~~~~~~~-------------------------------------------~~~---~-  278 (466)
T COG2319         248 SFSPDGSLLASGSSDGTIR--LWDLRSSS-------------------------------------------SLL---R-  278 (466)
T ss_pred             eECCCCCEEEEecCCCcEE--EeeecCCC-------------------------------------------cEE---E-
Confidence            5788887777788888888  77776521                                           100   0 


Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                      ....|...+.++.|.|++..+++++.|+.+.+|+.. .........                              ...|
T Consensus       279 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~------------------------------~~~~  327 (466)
T COG2319         279 TLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE-TGKLLSSLT------------------------------LKGH  327 (466)
T ss_pred             EEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC-CCceEEEee------------------------------eccc
Confidence            003457789999999988888889989889999887 333332222                              0011


Q ss_pred             CcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEE-E
Q psy10942        395 ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVS-T  472 (537)
Q Consensus       395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~  472 (537)
                      ..                 .+..+.|.+++..++.+ ..|+.+.+|++............ ..+..+.+++ ...+.. +
T Consensus       328 ~~-----------------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~  388 (466)
T COG2319         328 EG-----------------PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSP-DGRVVSSG  388 (466)
T ss_pred             CC-----------------ceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCC-ceEEEEEECC-CCCEEEEe
Confidence            11                 34455553332455555 67789999999887633333322 2288899988 544444 6


Q ss_pred             eCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..++.+.+|+............+...+           ...   .+++++..+++++.++.+++|
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~~~~~~~~~~~  439 (466)
T COG2319         389 STDGTVRLWDLSTGSLLRNLDGHTSRV-----------TSL---DFSPDGKSLASGSSDNTIRLW  439 (466)
T ss_pred             cCCCceEEEecccCeeeeeccCCCCcE-----------EEE---EECCCCcEEEEecCCCcEEEE
Confidence            889999999999888777666553455           667   899999999999999999887

>KOG0321|consensus

Probab=99.84  E-value=2.1e-20  Score=170.48  Aligned_cols=287  Identities=12%  Similarity=0.134  Sum_probs=181.7

Q ss_pred             CCcEEEEEeCccceEEeeeccceeh------hhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccc
Q psy10942         65 GGKTFVLAGGEKSLLHYYETSAVKE------LYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNK  137 (537)
Q Consensus        65 ~~~~~~~~~~~~~~i~~wd~~~~~~------~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~  137 (537)
                      +....|+.+.++|.|.++|...-.-      +.... +...|..+.|-|....|++++.|.++++||+++          
T Consensus        62 n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~----------  131 (720)
T KOG0321|consen   62 NKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKT----------  131 (720)
T ss_pred             CccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecc----------
Confidence            3678999999999999999865322      22333 336999999999777899999999999999998          


Q ss_pred             ccceeEE--eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHh-----------
Q psy10942        138 ILKFRKQ--FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEA-----------  204 (537)
Q Consensus       138 ~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~-----------  204 (537)
                       ..+...  +.||...|.++||.|.+...+++++.++.    +                 .|||.-...           
T Consensus       132 -s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~----i-----------------llWD~R~n~~d~~e~~~~~~  189 (720)
T KOG0321|consen  132 -SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGE----I-----------------LLWDCRCNGVDALEEFDNRI  189 (720)
T ss_pred             -ceeecceeecccccccchhhhccCCCcceeeccCCCc----E-----------------EEEEEeccchhhHHHHhhhh
Confidence             566555  89999999999999756555555555444    6                 555541110           


Q ss_pred             hhcccc----ccccc--ccccccCCCcCeEEE---EeccCcccCCCeeeeccC-CCcceeccccccCCCccccccccccc
Q psy10942        205 KFKQSS----SQQKH--NTERLGRDELKTVTL---LERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEA  274 (537)
Q Consensus       205 ~~~~~~----~~~l~--~~~~~~h~~~~~v~~---~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~  274 (537)
                      .....+    ...+.  ......+  ...|.+   +   .+..|...||+++. |+.|+  +||++......... ....
T Consensus       190 ~~~~n~~ptpskp~~kr~~k~kA~--s~ti~ssvTv---v~fkDe~tlaSaga~D~~iK--VWDLRk~~~~~r~e-p~~~  261 (720)
T KOG0321|consen  190 YGRHNTAPTPSKPLKKRIRKWKAA--SNTIFSSVTV---VLFKDESTLASAGAADSTIK--VWDLRKNYTAYRQE-PRGS  261 (720)
T ss_pred             hccccCCCCCCchhhccccccccc--cCceeeeeEE---EEEeccceeeeccCCCcceE--EEeecccccccccC-CCcc
Confidence            000111    00011  1112244  555555   4   57788899998877 99999  99999853322210 0111


Q ss_pred             ceeeeeeCCcc-----------eEEEEEeCCCeEEEEECCCCceeeeeecccccccCC--CeEEEEEcCCCCEEEEEeCC
Q psy10942        275 EHGAFYTGGTV-----------ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK--DINCVTVSPNDKLLASGSLD  341 (537)
Q Consensus       275 ~~~~~~~~~~v-----------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d  341 (537)
                      ..+..|....+           .++++.+.|+.|+.|++.+.....   ...+.++..  .-..-..+|++.++++|+.|
T Consensus       262 ~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP---~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd  338 (720)
T KOG0321|consen  262 DKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISP---VAEFSGKLNSSFYVKSELSPDDCSLLSGSSD  338 (720)
T ss_pred             cCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCc---hhhccCcccceeeeeeecCCCCceEeccCCC
Confidence            11222211111           455556669999999998765321   112222211  11122468999999999999


Q ss_pred             CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942        342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS  421 (537)
Q Consensus       342 ~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s  421 (537)
                      ...++|.+.........+.+|..                                                 .+++++|.
T Consensus       339 ~~ayiw~vs~~e~~~~~l~Ght~-------------------------------------------------eVt~V~w~  369 (720)
T KOG0321|consen  339 EQAYIWVVSSPEAPPALLLGHTR-------------------------------------------------EVTTVRWL  369 (720)
T ss_pred             cceeeeeecCccCChhhhhCcce-------------------------------------------------EEEEEeec
Confidence            99999999855555554444433                                                 55666665


Q ss_pred             CCC-CEEEEEeCCCcEEEEECCC
Q psy10942        422 PLD-RILISSSGDATIKLWCLTD  443 (537)
Q Consensus       422 ~~~-~~l~~~~~dg~i~i~d~~~  443 (537)
                      |.. .-+++++.|..+++|++..
T Consensus       370 pS~~t~v~TcSdD~~~kiW~l~~  392 (720)
T KOG0321|consen  370 PSATTPVATCSDDFRVKIWRLSN  392 (720)
T ss_pred             cccCCCceeeccCcceEEEeccC
Confidence            532 2355558888999998854

>KOG1963|consensus

Probab=99.84  E-value=3.2e-18  Score=162.60  Aligned_cols=427  Identities=15%  Similarity=0.154  Sum_probs=254.1

Q ss_pred             eeeeeeeeeccCCc-ceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccc------cccCCcEEEEEeCc
Q psy10942          3 FCVTCFDVIPQITS-EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETE------SKSGGKTFVLAGGE   75 (537)
Q Consensus         3 ~~V~~~~~~~~~~~-~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~   75 (537)
                      +.++.+.+.|.++. .++++++.+|.|++||...+.+++++...-++.++  .+.|....      ...++...+.+.+.
T Consensus        58 a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~--~~~~~~a~~s~~~~~s~~~~~~~~~~s~  135 (792)
T KOG1963|consen   58 APLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHAL--VYKPAQADISANVYVSVEDYSILTTFSK  135 (792)
T ss_pred             CccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEE--EechhHhCccceeEeecccceeeeeccc
Confidence            45667777765554 68889999999999999999999998866666665  33232100      00011111111111


Q ss_pred             c--ceEEeeeccce--ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         76 K--SLLHYYETSAV--KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        76 ~--~~i~~wd~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                      +  +..+-+.+.+-  .....+..+..-..+.+++.|.+.+..-. ..+.+|+....+..       .-....-..|.-.
T Consensus       136 ~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~-~~~~~~~v~~~~~~-------~~~~~~~~~Htf~  207 (792)
T KOG1963|consen  136 KLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHM-CKIHIYFVPKHTKH-------TSSRDITVHHTFN  207 (792)
T ss_pred             ccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEe-eeEEEEEeccccee-------eccchhhhhhccc
Confidence            1  11111111110  11111112223577888999988766655 45888988873100       0011111235556


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTL  230 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~  230 (537)
                      +++.+++ |++++++++..++.    |                 .+|.-...  ......+. ++     -|  ...|.+
T Consensus       208 ~t~~~~s-pn~~~~Aa~d~dGr----I-----------------~vw~d~~~--~~~~~t~t~lH-----WH--~~~V~~  256 (792)
T KOG1963|consen  208 ITCVALS-PNERYLAAGDSDGR----I-----------------LVWRDFGS--SDDSETCTLLH-----WH--HDEVNS  256 (792)
T ss_pred             ceeEEec-cccceEEEeccCCc----E-----------------EEEecccc--ccccccceEEE-----ec--ccccce
Confidence            7899999 78888776665554    8                 88864100  11223333 67     89  999999


Q ss_pred             EeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        231 LERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                      +   +|+++|.+|++|+..+.+.  +|.+.++..+...++..++..+....+.  ...+....|+.|.+....+......
T Consensus       257 L---~fS~~G~~LlSGG~E~VLv--~Wq~~T~~kqfLPRLgs~I~~i~vS~ds--~~~sl~~~DNqI~li~~~dl~~k~t  329 (792)
T KOG1963|consen  257 L---SFSSDGAYLLSGGREGVLV--LWQLETGKKQFLPRLGSPILHIVVSPDS--DLYSLVLEDNQIHLIKASDLEIKST  329 (792)
T ss_pred             e---EEecCCceEeecccceEEE--EEeecCCCcccccccCCeeEEEEEcCCC--CeEEEEecCceEEEEeccchhhhhh
Confidence            9   9999999999999999999  9999998766666666666666665554  3556666799999988755433221


Q ss_pred             eeccc-------ccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe----cCC---------------
Q psy10942        311 VLRGH-------KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG----HKK---------------  364 (537)
Q Consensus       311 ~~~~~-------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~---------------  364 (537)
                      + ...       .....+-.+.+.++|..+.++..+..|.|.+||+-+ ...+..+..    +.+               
T Consensus       330 I-sgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~t-d~~i~~~~v~~~n~~~~~~n~~v~itav~~~  407 (792)
T KOG1963|consen  330 I-SGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYT-DSTIYKLQVCDENYSDGDVNIQVGITAVARS  407 (792)
T ss_pred             c-cCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccc-cceeeeEEEEeecccCCcceeEEeeeeehhh
Confidence            1 111       112344567889999777888888999999999983 333333321    111               


Q ss_pred             --CCEEEEEcC--------C--CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEe
Q psy10942        365 --GTQIVSTGA--------D--GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSS  431 (537)
Q Consensus       365 --~~~l~~~~~--------d--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~  431 (537)
                        |.++++...        |  -.+++|-......-..+.       .....|.+..    .+..+.+++.. ..+++++
T Consensus       408 ~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~-------T~I~~PH~~~----~vat~~~~~~rs~~~vta~  476 (792)
T KOG1963|consen  408 RFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILN-------TKINNPHGNA----FVATIFLNPTRSVRCVTAS  476 (792)
T ss_pred             ccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEE-------EEEecCCCce----eEEEEEecCcccceeEEec
Confidence              334444321        1  134445433322111110       1111222221    12222233333 3899999


Q ss_pred             CCCcEEEEECCC----------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEE
Q psy10942        432 GDATIKLWCLTD----------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT-STCVST  491 (537)
Q Consensus       432 ~dg~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~  491 (537)
                      .||.+++|-+..          +.+...-..|..++++++|+.||..|+ .+.|++|.+||..+ .++...
T Consensus       477 ~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla-~s~~~~Itiwd~~~~~~l~~~  546 (792)
T KOG1963|consen  477 VDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLA-VSFDDTITIWDYDTKNELLCT  546 (792)
T ss_pred             cCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEE-EecCCEEEEecCCChhhhhcc
Confidence            999999998732          223222223788999999999996555 55678999999988 444333

>KOG0302|consensus

Probab=99.84  E-value=2.8e-19  Score=153.07  Aligned_cols=206  Identities=17%  Similarity=0.254  Sum_probs=152.9

Q ss_pred             cCCCcCeEEEEeccCcccC--CCeeeeccCCCcceeccccccCCCc-------ccccccccccceeeeeeC--Ccc----
Q psy10942        221 GRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTLEELEKRKTYHF-------PLFGIFVPEAEHGAFYTG--GTV----  285 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~~~iw~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~v----  285 (537)
                      +|  .+.+..+   ..++-  ..+.++-+..|.+.  +|++.....       ........|+.++.+|..  ..+    
T Consensus       149 ~h--~g~~NRv---r~~~~~~~~~~aswse~G~V~--Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp  221 (440)
T KOG0302|consen  149 PH--YGGINRV---RVSRLGNEVLCASWSENGRVQ--VWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSP  221 (440)
T ss_pred             cc--cccccee---eecccCCcceeeeecccCcEE--EEEchhhhhhhcCccccccccccCceEEecccCccceeeeccc
Confidence            56  6666666   55544  45666778889999  999875311       111122334556666665  222    


Q ss_pred             ---eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcee-eEEEE
Q psy10942        286 ---ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKL-LNVLR  360 (537)
Q Consensus       286 ---~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~-~~~~~  360 (537)
                         ..+++|.--+.|++|...++.-...  ...+.+|+..|..++|||.. ..|++++-||+|+|||++...+. ....+
T Consensus       222 ~~~g~LlsGDc~~~I~lw~~~~g~W~vd--~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~k  299 (440)
T KOG0302|consen  222 IKTGRLLSGDCVKGIHLWEPSTGSWKVD--QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTK  299 (440)
T ss_pred             ccccccccCccccceEeeeeccCceeec--CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEee
Confidence               4578888889999999988654332  45667899999999999954 58899999999999999944221 11123


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      .|..                                                 .|+-+.|+.+-.+||+|+.||+++|||
T Consensus       300 Ah~s-------------------------------------------------DVNVISWnr~~~lLasG~DdGt~~iwD  330 (440)
T KOG0302|consen  300 AHNS-------------------------------------------------DVNVISWNRREPLLASGGDDGTLSIWD  330 (440)
T ss_pred             ccCC-------------------------------------------------ceeeEEccCCcceeeecCCCceEEEEE
Confidence            3322                                                 677788888888999999999999999


Q ss_pred             CCC---ceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECC
Q psy10942        441 LTD---YVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       441 ~~~---~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ++.   ++++..++.|..+|+++.|+| +...|++++.|..|.+||+.
T Consensus       331 LR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls  378 (440)
T KOG0302|consen  331 LRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS  378 (440)
T ss_pred             hhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence            976   678999999999999999999 45678889999999999985

>KOG1009|consensus

Probab=99.83  E-value=7e-19  Score=152.21  Aligned_cols=328  Identities=10%  Similarity=0.060  Sum_probs=211.4

Q ss_pred             CcEEEEEeCccceEEeeecccee---------hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccC-----
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVK---------ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETG-----  130 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~---------~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-----  130 (537)
                      ....++++|.|..|++|-+..+.         .+..+..| ..|..+.|+|+|..||+|+.+|.|.+|-......     
T Consensus        25 ~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~  104 (434)
T KOG1009|consen   25 SLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADT  104 (434)
T ss_pred             cccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccc
Confidence            33489999999999999876432         23445544 6999999999999999999999999998762111     


Q ss_pred             cccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc
Q psy10942        131 LEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS  210 (537)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~  210 (537)
                      ............+.+.+|...+..++|+ +++.++++++.+..    +                 ++||+       ..+
T Consensus       105 e~~~~ke~w~v~k~lr~h~~diydL~Ws-~d~~~l~s~s~dns----~-----------------~l~Dv-------~~G  155 (434)
T KOG1009|consen  105 EADLNKEKWVVKKVLRGHRDDIYDLAWS-PDSNFLVSGSVDNS----V-----------------RLWDV-------HAG  155 (434)
T ss_pred             hhhhCccceEEEEEecccccchhhhhcc-CCCceeeeeeccce----E-----------------EEEEe-------ccc
Confidence            0011122245567888999999999999 88899999988888    8                 99999       888


Q ss_pred             ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEE
Q psy10942        211 SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELL  288 (537)
Q Consensus       211 ~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l  288 (537)
                      +..  +.     +|  ...+..+   +|.|-++++++-+.|...+  ...+....            ....+...  .++
T Consensus       156 ~l~~~~~-----dh--~~yvqgv---awDpl~qyv~s~s~dr~~~--~~~~~~~~------------~~~~~~~~--~m~  209 (434)
T KOG1009|consen  156 QLLAILD-----DH--EHYVQGV---AWDPLNQYVASKSSDRHPE--GFSAKLKQ------------VIKRHGLD--IMP  209 (434)
T ss_pred             eeEeecc-----cc--cccccee---ecchhhhhhhhhccCcccc--eeeeeeee------------eeeeeeee--Eee
Confidence            777  77     89  9999999   9999999999999988666  65555421            11111100  011


Q ss_pred             EEE---eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCC
Q psy10942        289 ASG---SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  365 (537)
Q Consensus       289 ~~~---~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  365 (537)
                      +-.   ......++|.-++.+              .-...++|+|+|.+|++..  |.+   +.. +.....        
T Consensus       210 ~~~~~~~e~~s~rLfhDeTlk--------------sFFrRlsfTPdG~llvtPa--g~~---~~g-~~~~~n--------  261 (434)
T KOG1009|consen  210 AKAFNEREGKSTRLFHDETLK--------------SFFRRLSFTPDGSLLVTPA--GLF---KVG-GGVFRN--------  261 (434)
T ss_pred             ecccCCCCcceeeeeecCchh--------------hhhhhcccCCCCcEEEccc--cee---eeC-Cceeec--------
Confidence            111   112334444444332              1235678999999998854  222   222 111000        


Q ss_pred             CEEEEEcCCCcEEEEECC-CCeeeeeeccCCcceEEEEEecCCCceEEeeeeE---EEEcCCCCEEEEEeCCCcEEEEEC
Q psy10942        366 TQIVSTGADGLLKLWSIK-TSTCVSTFDKHALKIWTLAITKDENQIITGGVWF---VNFSPLDRILISSSGDATIKLWCL  441 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~---~~~s~~~~~l~~~~~dg~i~i~d~  441 (537)
                                ..++|+-. ..++...+.....+...+.++|-.-.+-  +...   +---|-+-.+|.++. ..|++||.
T Consensus       262 ----------~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elr--p~~~~~~~~~lpyrlvfaiAt~-~svyvydt  328 (434)
T KOG1009|consen  262 ----------TSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELR--PLSSEKFLFVLPYRLVFAIATK-NSVYVYDT  328 (434)
T ss_pred             ----------eeEeeccccccCceeecCCCCcceEEEEeeeeEEEec--cccccccccccccceEEEEeec-ceEEEecc
Confidence                      00111110 1123333344444444444443211110  1110   111244445666665 58999999


Q ss_pred             CCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        442 TDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       442 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      ++..++..... |-..|+.++|++||..|+..|.||...+-.++..++-
T Consensus       329 q~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  329 QTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             ccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence            99887776644 8889999999999999999999999888887766544

>KOG0270|consensus

Probab=99.83  E-value=5.6e-19  Score=154.53  Aligned_cols=241  Identities=20%  Similarity=0.243  Sum_probs=169.2

Q ss_pred             EEEEeccCc----ccCCCeeeeccCCCcceeccccccCCCcccccccc------------cccceeeeeeCC--cc----
Q psy10942        228 VTLLERGKT----VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV------------PEAEHGAFYTGG--TV----  285 (537)
Q Consensus       228 v~~~~~~~~----s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~------------~~~~~~~~~~~~--~v----  285 (537)
                      ..|++|..+    ...|+++|.|+.|..|.  |||+.-.....-+...            .......+|+..  .+    
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~Ie--IWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~  253 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIE--IWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR  253 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeE--EeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence            356644444    12468999999999999  9998753221111000            001112244431  11    


Q ss_pred             ---eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEe
Q psy10942        286 ---ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRG  361 (537)
Q Consensus       286 ---~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  361 (537)
                         +.|++|+.|.+|++||+.++++     ...+..|...|.++.|+|. ...|++|+.|+++.+.|.+.....-.    
T Consensus       254 ~~~nVLaSgsaD~TV~lWD~~~g~p-----~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~----  324 (463)
T KOG0270|consen  254 NFRNVLASGSADKTVKLWDVDTGKP-----KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK----  324 (463)
T ss_pred             ccceeEEecCCCceEEEEEcCCCCc-----ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc----
Confidence               8899999999999999999987     5566789999999999994 67899999999999999983111000    


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWC  440 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d  440 (537)
                                       -|.                             +.+.|..++|.|.. ..++++..||.++-+|
T Consensus       325 -----------------~wk-----------------------------~~g~VEkv~w~~~se~~f~~~tddG~v~~~D  358 (463)
T KOG0270|consen  325 -----------------EWK-----------------------------FDGEVEKVAWDPHSENSFFVSTDDGTVYYFD  358 (463)
T ss_pred             -----------------eEE-----------------------------eccceEEEEecCCCceeEEEecCCceEEeee
Confidence                             011                             11166777777765 4677788999999999


Q ss_pred             CCC-ceeeeEeecCCcceEEEEEecC-CCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceee
Q psy10942        441 LTD-YVCLKSLEGHDASVLRCHFINK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC  518 (537)
Q Consensus       441 ~~~-~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  518 (537)
                      ++. ++++.+++.|.++|.++++++. ..+|++++.|+.|++|++..... .....|.-.+           ..+.|.++
T Consensus       359 ~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~-~~v~~~~~~~-----------~rl~c~~~  426 (463)
T KOG0270|consen  359 IRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP-KSVKEHSFKL-----------GRLHCFAL  426 (463)
T ss_pred             cCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCC-cccccccccc-----------cceeeccc
Confidence            987 5999999999999999999884 45788999999999999865443 2223344333           22333377


Q ss_pred             ecCCC-EEEEEeCCCCEEeC
Q psy10942        519 SRNSD-CEYRGGWSPQVVVY  537 (537)
Q Consensus       519 s~~~~-~l~s~~~dg~i~vW  537 (537)
                      .|+-. .|+.|+..+.++||
T Consensus       427 ~~~~a~~la~GG~k~~~~vw  446 (463)
T KOG0270|consen  427 DPDVAFTLAFGGEKAVLRVW  446 (463)
T ss_pred             CCCcceEEEecCccceEEEe
Confidence            77765 55667777779988

>KOG1009|consensus

Probab=99.83  E-value=2.5e-19  Score=154.97  Aligned_cols=317  Identities=11%  Similarity=0.068  Sum_probs=203.4

Q ss_pred             CCcceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      .+++|.++.|.++.. .||+|+.|..|++|-+....+..  .....+....+..|...|+++.|+ +++..|+++..++.
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~--~~~~V~y~s~Ls~H~~aVN~vRf~-p~gelLASg~D~g~   88 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGG--GDMKVEYLSSLSRHTRAVNVVRFS-PDGELLASGGDGGE   88 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCC--CceeEEEeecccCCcceeEEEEEc-CCcCeeeecCCCce
Confidence            457899999988877 99999999999999988743221  112345667788999999999999 78888888877766


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhh-ccc-----ccccccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKF-KQS-----SSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~-~~~-----~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                          +                 .+|-..+.+-+ .++     .+..+..+...+|  ...|..+   +|+|++.++++++
T Consensus        89 ----v-----------------~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h--~~diydL---~Ws~d~~~l~s~s  142 (434)
T KOG1009|consen   89 ----V-----------------FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGH--RDDIYDL---AWSPDSNFLVSGS  142 (434)
T ss_pred             ----E-----------------EEEEecCcCCccccchhhhCccceEEEEEeccc--ccchhhh---hccCCCceeeeee
Confidence                7                 66654100000 001     1111112233389  8999999   9999999998888


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      .|..++  +||+..+                                           ..     ...+.+|...+..++
T Consensus       143 ~dns~~--l~Dv~~G-------------------------------------------~l-----~~~~~dh~~yvqgva  172 (434)
T KOG1009|consen  143 VDNSVR--LWDVHAG-------------------------------------------QL-----LAILDDHEHYVQGVA  172 (434)
T ss_pred             ccceEE--EEEeccc-------------------------------------------ee-----Eeeccccccccceee
Confidence            888877  7777663                                           21     333457888899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCC---cEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      |.|-++++++-+.|...+.+.+. ..+.+.....   ....+-....+   ..++|.=++.+.                 
T Consensus       173 wDpl~qyv~s~s~dr~~~~~~~~-~~~~~~~~~~---~~m~~~~~~~~e~~s~rLfhDeTlks-----------------  231 (434)
T KOG1009|consen  173 WDPLNQYVASKSSDRHPEGFSAK-LKQVIKRHGL---DIMPAKAFNEREGKSTRLFHDETLKS-----------------  231 (434)
T ss_pred             cchhhhhhhhhccCcccceeeee-eeeeeeeeee---eEeeecccCCCCcceeeeeecCchhh-----------------
Confidence            99999999999999877777776 3333322221   01111111111   122221111110                 


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeC----CC-----cEEEEECCC-ceeeeEeecCCcceEEEEEec----------
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSG----DA-----TIKLWCLTD-YVCLKSLEGHDASVLRCHFIN----------  464 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg-----~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~----------  464 (537)
                               -...++|+|||.++++...    .+     ..++|+-.. .++...+.+...+...+.|+|          
T Consensus       232 ---------FFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~  302 (434)
T KOG1009|consen  232 ---------FFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSS  302 (434)
T ss_pred             ---------hhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccc
Confidence                     2334566677766665432    12     233443222 344555555555555666554          


Q ss_pred             --------CCCEEEEEeCCCcEEEEECCCCeeEEEec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        465 --------KGTQIVSTGADGLLKLWSIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       465 --------~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                              .+-.+|.++. +.|+|||.++-+++.... -|-..+           +.+   +|++||..|+..+.||...
T Consensus       303 ~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~i-----------TDi---aws~dg~~l~vSS~DGyCS  367 (434)
T KOG1009|consen  303 EKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAI-----------TDI---AWSDDGSVLLVSSTDGFCS  367 (434)
T ss_pred             cccccccccceEEEEeec-ceEEEeccccccceEEEeeeeeeee-----------cce---eecCCCcEEEEeccCCceE
Confidence                    2233455554 479999999888876654 477888           899   9999999999999999754

>KOG0322|consensus

Probab=99.81  E-value=2.2e-19  Score=146.48  Aligned_cols=256  Identities=18%  Similarity=0.218  Sum_probs=179.3

Q ss_pred             ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc
Q psy10942        140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT  217 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~  217 (537)
                      .+...+++|...|+++.|- .+ .+|..+...+-    +                 .+|++       ++.+..  +.  
T Consensus         5 dP~fvLRp~~~~v~s~~fq-a~-~rL~sg~~~G~----V-----------------~~w~l-------qt~r~~~~~r--   52 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQ-AN-ERLMSGLSVGI----V-----------------KMWVL-------QTERDLPLIR--   52 (323)
T ss_pred             CCeeEeccccchheehhhc-cc-hhhhcccccce----E-----------------EEEEe-------ecCccchhhh--
Confidence            4456677999999999997 44 44666665555    7                 88888       666555  33  


Q ss_pred             ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCc----------ccccccc----cccc-eeeeeeC
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHF----------PLFGIFV----PEAE-HGAFYTG  282 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~----------~~~~~~~----~~~~-~~~~~~~  282 (537)
                        ..|  ...|+.+   ..-|+ ..+.+-+.|..+.  +|++.....          ..+|.+.    +... .+.....
T Consensus        53 --~~g--~~~it~l---q~~p~-d~l~tqgRd~~L~--lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~  122 (323)
T KOG0322|consen   53 --LFG--RLFITNL---QSIPN-DSLDTQGRDPLLI--LWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPS  122 (323)
T ss_pred             --hhc--cceeece---eecCC-cchhhcCCCceEE--EEEccCcceEEEeeeeccccccccceeccCCCcchhheecCC
Confidence              034  6778888   77777 5778888899999  998876211          1111110    0000 0000000


Q ss_pred             ----------------------------Ccc------------eEEEEEeCCCeEEEEECCCCceeeeee-----ccccc
Q psy10942        283 ----------------------------GTV------------ELLASGSLDKTVKVWSTTGGLKLLNVL-----RGHKK  317 (537)
Q Consensus       283 ----------------------------~~v------------~~l~~~~~d~~i~i~~~~~~~~~~~~~-----~~~~~  317 (537)
                                                  +++            -++++|.++|.+.+||+.++.....+.     .....
T Consensus       123 rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~a  202 (323)
T KOG0322|consen  123 RGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNA  202 (323)
T ss_pred             cccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchh
Confidence                                        000            567889999999999999874433221     22346


Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      .|..+|.++.|.+.-..=++|+.+..+..|++......+.                             .........- 
T Consensus       203 sh~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq-----------------------------~~~e~~lknp-  252 (323)
T KOG0322|consen  203 SHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQ-----------------------------IRKEITLKNP-  252 (323)
T ss_pred             hccCcceeeeechhhcCCcCCCccccceeeeeccccCccc-----------------------------ccceEEecCC-
Confidence            7899999999988666667788888888888872211100                             0000000000 


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL  477 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  477 (537)
                                      ++..+..-||++++|+++.|+.|++|+.++..++..++.|.+.|++++|+|+...+|+++.|++
T Consensus       253 ----------------Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~r  316 (323)
T KOG0322|consen  253 ----------------GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDAR  316 (323)
T ss_pred             ----------------CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCce
Confidence                            6778889999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEC
Q psy10942        478 LKLWSI  483 (537)
Q Consensus       478 v~vwd~  483 (537)
                      |.+|++
T Consensus       317 ISLWkL  322 (323)
T KOG0322|consen  317 ISLWKL  322 (323)
T ss_pred             EEeeec
Confidence            999986

>KOG0307|consensus

Probab=99.80  E-value=1.3e-19  Score=176.79  Aligned_cols=276  Identities=14%  Similarity=0.199  Sum_probs=200.2

Q ss_pred             cceEEeeecc--ce----ehhhhcCCCcceEEEEEeccccE----EEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         76 KSLLHYYETS--AV----KELYQHGLSSPLVRIVRSSVKRM----YAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        76 ~~~i~~wd~~--~~----~~~~~~~~~~~v~~~~~s~~~~~----la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +..+.+|.+.  +.    +.+..+........++|.+.|..    ||.|..||.|.+||...-     ........+.+.
T Consensus        38 ~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~-----~~~~~~~~la~~  112 (1049)
T KOG0307|consen   38 SASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASI-----IANASEEVLATK  112 (1049)
T ss_pred             ccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCCceEEecchhh-----ccCcchHHHhhh
Confidence            4455566443  22    34555555578999999987776    888999999999998761     112225677888


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCc
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDEL  225 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~  225 (537)
                      ..|.+.|..+.|++..++.|+++.++++    |                 .|||+       +..+..+... -...  .
T Consensus       113 ~~h~G~V~gLDfN~~q~nlLASGa~~ge----I-----------------~iWDl-------nn~~tP~~~~-~~~~--~  161 (1049)
T KOG0307|consen  113 SKHTGPVLGLDFNPFQGNLLASGADDGE----I-----------------LIWDL-------NKPETPFTPG-SQAP--P  161 (1049)
T ss_pred             cccCCceeeeeccccCCceeeccCCCCc----E-----------------EEecc-------CCcCCCCCCC-CCCC--c
Confidence            8999999999999777778888877777    9                 99999       6544442200 0113  5


Q ss_pred             CeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        226 KTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ..|.++   +|+..- ..|++++.+|...  +||++..                                          
T Consensus       162 ~eI~~l---sWNrkvqhILAS~s~sg~~~--iWDlr~~------------------------------------------  194 (1049)
T KOG0307|consen  162 SEIKCL---SWNRKVSHILASGSPSGRAV--IWDLRKK------------------------------------------  194 (1049)
T ss_pred             ccceEe---ccchhhhHHhhccCCCCCce--eccccCC------------------------------------------
Confidence            778888   777543 4556666666776  7777663                                          


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCC---cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDK---TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                       +.+..+   ........+..++|+|+. ..+++++.|.   .|.+||++....+++.+..|..                
T Consensus       195 -~pii~l---s~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~----------------  254 (1049)
T KOG0307|consen  195 -KPIIKL---SDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQR----------------  254 (1049)
T ss_pred             -Cccccc---ccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccccc----------------
Confidence             211111   001111347789999976 3556665543   5888998866666666666655                


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR  459 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~  459 (537)
                                                       +|.++.|++.+ ++|++++.|+.|.+|+.++++.+..+....+.+..
T Consensus       255 ---------------------------------GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fd  301 (1049)
T KOG0307|consen  255 ---------------------------------GILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFD  301 (1049)
T ss_pred             ---------------------------------ceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceee
Confidence                                             88899999877 89999999999999999999999999988889999


Q ss_pred             EEEecCCC-EEEEEeCCCcEEEEECCCCe
Q psy10942        460 CHFINKGT-QIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       460 ~~~s~~~~-~l~s~~~dg~v~vwd~~~~~  487 (537)
                      +.|+|... .++.++-||.|.|+.+..+.
T Consensus       302 v~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  302 VQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             eeecCCCcchhhhheeccceeeeeeecCC
Confidence            99999655 88889999999999987553

>KOG0642|consensus

Probab=99.80  E-value=7.7e-19  Score=158.37  Aligned_cols=277  Identities=17%  Similarity=0.165  Sum_probs=192.8

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE  218 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~  218 (537)
                      ..+..++..|.+.+..++|. +-...++.++-++.    +                 .+|++..  ........+.+.-.
T Consensus       284 w~ik~tl~s~~d~ir~l~~~-~sep~lit~sed~~----l-----------------k~WnLqk--~~~s~~~~~epi~t  339 (577)
T KOG0642|consen  284 WNIKFTLRSHDDCIRALAFH-PSEPVLITASEDGT----L-----------------KLWNLQK--AKKSAEKDVEPILT  339 (577)
T ss_pred             cceeeeeecchhhhhhhhcC-CCCCeEEEeccccc----h-----------------hhhhhcc--cCCccccceeeeEE
Confidence            34455788899999999998 66777888887777    9                 9999922  11111111111223


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVK  298 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~  298 (537)
                      +.+|  .++|.|+   +++++++.+++|+.||+|+  .|++.....+           ..                    
T Consensus       340 fraH--~gPVl~v---~v~~n~~~~ysgg~Dg~I~--~w~~p~n~dp-----------~d--------------------  381 (577)
T KOG0642|consen  340 FRAH--EGPVLCV---VVPSNGEHCYSGGIDGTIR--CWNLPPNQDP-----------DD--------------------  381 (577)
T ss_pred             Eecc--cCceEEE---EecCCceEEEeeccCceee--eeccCCCCCc-----------cc--------------------
Confidence            4499  9999999   9999999999999999999  9998742111           00                    


Q ss_pred             EEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCC------------
Q psy10942        299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGT------------  366 (537)
Q Consensus       299 i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------------  366 (537)
                      .+|...       +...+.+|.+.|+.+++|+....|++++.||++++|+.. ...+ .++.......            
T Consensus       382 s~dp~v-------l~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~-~~~~-~~f~~~~e~g~Plsvd~~ss~~  452 (577)
T KOG0642|consen  382 SYDPSV-------LSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT-EESP-CTFGEPKEHGYPLSVDRTSSRP  452 (577)
T ss_pred             ccCcch-------hccceeccccceeeeeecccccceeeecCCceEEeeccC-CcCc-cccCCccccCCcceEeeccchh
Confidence            111111       145678999999999999999999999999999999988 3333 2222222111            


Q ss_pred             -EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce
Q psy10942        367 -QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV  445 (537)
Q Consensus       367 -~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~  445 (537)
                       ..++...-+.-.+++......+..+.....+.  ..        ....+..+...|.+.+.+++..|+.|+++|..+++
T Consensus       453 a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~--~~--------~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~  522 (577)
T KOG0642|consen  453 AHSLASFRFGYTSIDDMEVVSDLLIFESSASPG--PR--------RYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGK  522 (577)
T ss_pred             HhhhhhcccccccchhhhhhhheeeccccCCCc--cc--------ccCccceEEecCCCCeeEecccCCceecccccccc
Confidence             11111111222223333333333332211110  00        00156778889999999999999999999999999


Q ss_pred             eeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       446 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      ++.....|...++++++.|+|.+|++++.||.+++|.+....++.....|.
T Consensus       523 ~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  523 ILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             cchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence            999999999999999999999999999999999999997776666555553

>KOG1034|consensus

Probab=99.79  E-value=1.5e-18  Score=146.11  Aligned_cols=286  Identities=16%  Similarity=0.182  Sum_probs=193.2

Q ss_pred             CcceEEEecCcceEEEEEcCccceee---eec---cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLR---SYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK   88 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~   88 (537)
                      +...++++|.+. +.+|+....--++   ...   +.|..-.++..+-..      .+.++++.+|.-|.|+|.|+.+++
T Consensus        54 e~~vfatvG~~r-vtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~------~~~p~la~~G~~GvIrVid~~~~~  126 (385)
T KOG1034|consen   54 EPQVFATVGGNR-VTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSN------TGNPFLAAGGYLGVIRVIDVVSGQ  126 (385)
T ss_pred             CCceEEEeCCcE-EEEEEECCccceeeeeeccCCCCCcceEEEEEEecCC------CCCeeEEeecceeEEEEEecchhh
Confidence            445777877765 8888876543233   222   344555564444332      146899999999999999999999


Q ss_pred             hhhhcCCCc-ceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEe---ecchhhhhhhhcccCCCc
Q psy10942         89 ELYQHGLSS-PLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF---VGFSDEILDIALLGEEDS  163 (537)
Q Consensus        89 ~~~~~~~~~-~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~  163 (537)
                      ....+.+|+ .|..+.|.|+. +++++++.|..|++|++++           ..++..+   .+|.+.|.++.|+ .++.
T Consensus       127 ~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~-----------~~Cv~VfGG~egHrdeVLSvD~~-~~gd  194 (385)
T KOG1034|consen  127 CSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT-----------DVCVAVFGGVEGHRDEVLSVDFS-LDGD  194 (385)
T ss_pred             hccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC-----------CeEEEEecccccccCcEEEEEEc-CCCC
Confidence            999998885 89999999987 5788999999999999999           6766665   5799999999999 7777


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH-------hh--h--cccc------ccccc-ccccccCCCc
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE-------AK--F--KQSS------SQQKH-NTERLGRDEL  225 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~-------~~--~--~~~~------~~~l~-~~~~~~h~~~  225 (537)
                      +++++.-+..    +                 ++|++...       ..  +  ..+.      .+.++ .....-|  .
T Consensus       195 ~i~ScGmDhs----l-----------------k~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diH--r  251 (385)
T KOG1034|consen  195 RIASCGMDHS----L-----------------KLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIH--R  251 (385)
T ss_pred             eeeccCCcce----E-----------------EEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccc--c
Confidence            8888887777    8                 77766100       00  0  0000      00111 0012246  6


Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc-cceeeeeeC---Ccc-----------eEEEE
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE-AEHGAFYTG---GTV-----------ELLAS  290 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~-~~~~~~~~~---~~v-----------~~l~~  290 (537)
                      ..|-|+   .|-  |+++++-+-++.|.  .|....-.........+. ..+..++-.   ..+           +.|+.
T Consensus       252 nyVDCv---rw~--gd~ilSkscenaI~--~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~  324 (385)
T KOG1034|consen  252 NYVDCV---RWF--GDFILSKSCENAIV--CWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL  324 (385)
T ss_pred             chHHHH---HHH--hhheeecccCceEE--EEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh
Confidence            677777   554  47889888888999  998843221111110111 111111111   111           78899


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      |...|.|.+||++........ ...-......|+..+|+.|+..|+..++|++|.-||..
T Consensus       325 gnq~g~v~vwdL~~~ep~~~t-tl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  325 GNQSGKVYVWDLDNNEPPKCT-TLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ccCCCcEEEEECCCCCCccCc-eEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            999999999999987653111 11112234679999999999999999999999999864

>KOG0270|consensus

Probab=99.79  E-value=3.4e-18  Score=149.71  Aligned_cols=256  Identities=16%  Similarity=0.152  Sum_probs=179.8

Q ss_pred             cceEEEEEec-------cccEEEEEeCCceEEEEecccccCcccc----------cccccceeEEeecchhhhhhhhccc
Q psy10942         97 SPLVRIVRSS-------VKRMYAVVTADHNISLYRLNSETGLEER----------PNKILKFRKQFVGFSDEILDIALLG  159 (537)
Q Consensus        97 ~~v~~~~~s~-------~~~~la~~~~d~~i~iwd~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~  159 (537)
                      ....|++|..       -|+|+|+|+.|..|.|||+.-.....+.          ..+.++.-..-.+|++.|.+++|+.
T Consensus       174 afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~  253 (463)
T KOG0270|consen  174 AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR  253 (463)
T ss_pred             CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence            4456676632       3679999999999999998752221100          0000000111237999999999996


Q ss_pred             CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcc
Q psy10942        160 EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTV  237 (537)
Q Consensus       160 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s  237 (537)
                      ...+.|++++.+..    |                 ++||+       .++++.  +.     .|  .+.|.++   .|+
T Consensus       254 ~~~nVLaSgsaD~T----V-----------------~lWD~-------~~g~p~~s~~-----~~--~k~Vq~l---~wh  295 (463)
T KOG0270|consen  254 NFRNVLASGSADKT----V-----------------KLWDV-------DTGKPKSSIT-----HH--GKKVQTL---EWH  295 (463)
T ss_pred             ccceeEEecCCCce----E-----------------EEEEc-------CCCCcceehh-----hc--CCceeEE---Eec
Confidence            66777888888887    9                 99999       999988  66     78  9999999   888


Q ss_pred             cC-CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        238 KE-EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       238 ~~-~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      |. ...|++|+.|+++.  +.|.+...                               ..=+-|..              
T Consensus       296 ~~~p~~LLsGs~D~~V~--l~D~R~~~-------------------------------~s~~~wk~--------------  328 (463)
T KOG0270|consen  296 PYEPSVLLSGSYDGTVA--LKDCRDPS-------------------------------NSGKEWKF--------------  328 (463)
T ss_pred             CCCceEEEeccccceEE--eeeccCcc-------------------------------ccCceEEe--------------
Confidence            75 46788888888888  77776521                               01122322              


Q ss_pred             cccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        317 KGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                         .+.|-.++|.|.. ..++++..||+++-+|++..++++.++..|.+                               
T Consensus       329 ---~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~-------------------------------  374 (463)
T KOG0270|consen  329 ---DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDD-------------------------------  374 (463)
T ss_pred             ---ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccC-------------------------------
Confidence               3457788888844 56777889999999999977777777777765                               


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEee--cCCcceEEEEEecCCC-EEEE
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKGT-QIVS  471 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~s  471 (537)
                                        +|.++++++.- .++++++.|+.|++|++..-.+.....  ---+...|+++.|+-. .||.
T Consensus       375 ------------------~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~  436 (463)
T KOG0270|consen  375 ------------------EISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAF  436 (463)
T ss_pred             ------------------CcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEe
Confidence                              77777777764 578899999999999987543322111  1123356667777543 6778


Q ss_pred             EeCCCcEEEEECCCCeeE
Q psy10942        472 TGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~~~~  489 (537)
                      |+..+.++|||+.+...+
T Consensus       437 GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  437 GGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             cCccceEEEeecccChhH
Confidence            888888999999876544

>KOG0322|consensus

Probab=99.79  E-value=3e-18  Score=139.90  Aligned_cols=224  Identities=15%  Similarity=0.180  Sum_probs=165.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee--EEE---
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL--NVL---  359 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~---  359 (537)
                      .++++|...|.+++|++++....     ..+. .+...|+.+.--|+ ..|.+-+.|..+.+|++... ..+  ..+   
T Consensus        26 ~rL~sg~~~G~V~~w~lqt~r~~-----~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s-~~i~i~Si~~n   98 (323)
T KOG0322|consen   26 ERLMSGLSVGIVKMWVLQTERDL-----PLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYS-AFISIHSIVVN   98 (323)
T ss_pred             hhhhcccccceEEEEEeecCccc-----hhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCc-ceEEEeeeecc
Confidence            57999999999999999988763     3344 56788999999887 46788889999999998731 110  000   


Q ss_pred             --------------------EecC---------------------------------------C--CCEEEEEcCCCcEE
Q psy10942        360 --------------------RGHK---------------------------------------K--GTQIVSTGADGLLK  378 (537)
Q Consensus       360 --------------------~~~~---------------------------------------~--~~~l~~~~~d~~i~  378 (537)
                                          ..+.                                       .  .-++++|-.+|.+.
T Consensus        99 slgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv  178 (323)
T KOG0322|consen   99 SLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVV  178 (323)
T ss_pred             ccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEE
Confidence                                0000                                       0  12466788899999


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc--e--eeeEeecCC
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY--V--CLKSLEGHD  454 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~--~~~~~~~~~  454 (537)
                      +||+.++..+..+.....-+...+-+.+       ++.++.|.+....=++|+.+..+.+|++...  .  ...+..-..
T Consensus       179 ~wd~S~~~~~~~~~~~~kv~~~~ash~q-------pvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lkn  251 (323)
T KOG0322|consen  179 IWDLSTGDKIIQLPQSSKVESPNASHKQ-------PVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKN  251 (323)
T ss_pred             EEEccCCceeeccccccccccchhhccC-------cceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecC
Confidence            9999998655555433322222222211       6777777766555667777778888887642  2  122222223


Q ss_pred             cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942        455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV  534 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i  534 (537)
                      -.|..+..-||++.+||++.|+.||||..++..++..++-|...|           .++   +|+||.+++|.++.|+.|
T Consensus       252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagv-----------n~v---Afspd~~lmAaaskD~rI  317 (323)
T KOG0322|consen  252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGV-----------NAV---AFSPDCELMAAASKDARI  317 (323)
T ss_pred             CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcce-----------eEE---EeCCCCchhhhccCCceE
Confidence            458889999999999999999999999999999999999999999           999   999999999999999999


Q ss_pred             EeC
Q psy10942        535 VVY  537 (537)
Q Consensus       535 ~vW  537 (537)
                      .+|
T Consensus       318 SLW  320 (323)
T KOG0322|consen  318 SLW  320 (323)
T ss_pred             Eee
Confidence            999

>KOG1188|consensus

Probab=99.78  E-value=1.3e-17  Score=141.20  Aligned_cols=180  Identities=18%  Similarity=0.257  Sum_probs=134.3

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCcee-eEEEEec
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKL-LNVLRGH  362 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~  362 (537)
                      ..++++...|.|++||..+++.     ...++++...++.+.|..  ..+.+.+++.||+|++||++...+. ......+
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~-----l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~  115 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQL-----LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ  115 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhh-----hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC
Confidence            4688899999999999999776     556688888899999987  5678999999999999999843222 1222222


Q ss_pred             C-----------CCCEEEEEcC----CCcEEEEECCCCee-eeee-ccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-
Q psy10942        363 K-----------KGTQIVSTGA----DGLLKLWSIKTSTC-VSTF-DKHALKIWTLAITKDENQIITGGVWFVNFSPLD-  424 (537)
Q Consensus       363 ~-----------~~~~l~~~~~----d~~i~i~d~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-  424 (537)
                      +           .+..+++|+.    +-.+.+||++..+. +..+ +.|..                 .|+++.|+|.. 
T Consensus       116 ~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~D-----------------DVT~lrFHP~~p  178 (376)
T KOG1188|consen  116 SGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHND-----------------DVTQLRFHPSDP  178 (376)
T ss_pred             CCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccC-----------------cceeEEecCCCC
Confidence            2           3556666643    56899999998876 5444 56776                 56666676654 


Q ss_pred             CEEEEEeCCCcEEEEECCCce---eeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCe
Q psy10942        425 RILISSSGDATIKLWCLTDYV---CLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       425 ~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      ++|++|+.||.|.+||++...   .+...-.|...|..+.|..++ +.|.+-+...+..+|+++.+.
T Consensus       179 nlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~  245 (376)
T KOG1188|consen  179 NLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS  245 (376)
T ss_pred             CeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence            789999999999999997632   122223377789999998876 457788888899999987664

>KOG0644|consensus

Probab=99.78  E-value=8.2e-19  Score=165.03  Aligned_cols=254  Identities=19%  Similarity=0.211  Sum_probs=192.8

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--C--cc----eEEEEEe
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--G--TV----ELLASGS  292 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~--~v----~~l~~~~  292 (537)
                      ||  ...|+|+   .|...|.++++|+.|..++  +|...+    ..|     +....+|.+  .  .+    .++++++
T Consensus       188 gH--~naVyca---~fDrtg~~Iitgsdd~lvK--iwS~et----~~~-----lAs~rGhs~ditdlavs~~n~~iaaaS  251 (1113)
T KOG0644|consen  188 GH--RNAVYCA---IFDRTGRYIITGSDDRLVK--IWSMET----ARC-----LASCRGHSGDITDLAVSSNNTMIAAAS  251 (1113)
T ss_pred             hh--hhheeee---eeccccceEeecCccceee--eeeccc----hhh-----hccCCCCccccchhccchhhhhhhhcc
Confidence            99  9999999   9999999999999999999  999887    555     677777776  1  12    5788999


Q ss_pred             CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-------------CceeeEEE
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG-------------GLKLLNVL  359 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~-------------~~~~~~~~  359 (537)
                      .|..|++|.+..+..     ...+.+|++.|++++|+|-.    +.+.||++++||.+-             ....+..+
T Consensus       252 ~D~vIrvWrl~~~~p-----vsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~  322 (1113)
T KOG0644|consen  252 NDKVIRVWRLPDGAP-----VSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSI  322 (1113)
T ss_pred             cCceEEEEecCCCch-----HHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeee
Confidence            999999999999876     66789999999999999954    678899999999871             22233444


Q ss_pred             EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEE
Q psy10942        360 RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKL  438 (537)
Q Consensus       360 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i  438 (537)
                      .....+..+++++.|+.-..|.......      +..                 .+.-+.++.+ ..+.+++-.+-.+.+
T Consensus       323 ~~~~~~~~f~Tgs~d~ea~n~e~~~l~~------~~~-----------------~lif~t~ssd~~~~~~~ar~~~~~~v  379 (1113)
T KOG0644|consen  323 LFENNGDRFLTGSRDGEARNHEFEQLAW------RSN-----------------LLIFVTRSSDLSSIVVTARNDHRLCV  379 (1113)
T ss_pred             eccccccccccccCCcccccchhhHhhh------hcc-----------------ceEEEeccccccccceeeeeeeEeee
Confidence            4455567778888888776665442211      000                 1111111112 245666777888999


Q ss_pred             EECCCceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccccee
Q psy10942        439 WCLTDYVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQL  517 (537)
Q Consensus       439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  517 (537)
                      |++.+|...+.+.+|...+..+.++|-. +...+++.||...|||+-.|.+++.+......+           ..-   +
T Consensus       380 wnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl-----------~d~---k  445 (1113)
T KOG0644|consen  380 WNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKL-----------VDG---K  445 (1113)
T ss_pred             eecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeeccccee-----------ecc---c
Confidence            9999999999999999999999999954 455689999999999999998887665334444           455   8


Q ss_pred             eecCCCEEEEEeCCCCEEe
Q psy10942        518 CSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       518 ~s~~~~~l~s~~~dg~i~v  536 (537)
                      ||+||..++....-|.+.|
T Consensus       446 FSqdgts~~lsd~hgql~i  464 (1113)
T KOG0644|consen  446 FSQDGTSIALSDDHGQLYI  464 (1113)
T ss_pred             cCCCCceEecCCCCCceEE
Confidence            9999888877766666654

>KOG4227|consensus

Probab=99.78  E-value=5.6e-18  Score=145.93  Aligned_cols=300  Identities=12%  Similarity=0.061  Sum_probs=202.3

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      +.+.|.++.||.++++||+|+.|..+++|+++..-     ..+..+++... ..|...|.|++|. ....++.++...+.
T Consensus        55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~-----~~k~~KPI~~~~~~H~SNIF~L~F~-~~N~~~~SG~~~~~  128 (609)
T KOG4227|consen   55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELM-----VRKTPKPIGVMEHPHRSNIFSLEFD-LENRFLYSGERWGT  128 (609)
T ss_pred             hccccceeeeccCCeEEeecCCcceeeeechHHHH-----hhcCCCCceeccCccccceEEEEEc-cCCeeEecCCCcce
Confidence            33789999999999999999999999999987520     00001222222 2355789999998 66777777666665


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCC-CcCeEEEEeccCcccCCCeeeeccCCCc
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRD-ELKTVTLLERGKTVKEEDLFPRQSMEPS  251 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~-~~~~v~~~~~~~~s~~~~~l~~~~~d~~  251 (537)
                          |                 .+.|+       ++.+.+ ..     .|. ..+.|+.+   ..+|..+.|++.+.++.
T Consensus       129 ----V-----------------I~HDi-------Et~qsi~V~-----~~~~~~~~VY~m---~~~P~DN~~~~~t~~~~  172 (609)
T KOG4227|consen  129 ----V-----------------IKHDI-------ETKQSIYVA-----NENNNRGDVYHM---DQHPTDNTLIVVTRAKL  172 (609)
T ss_pred             ----e-----------------Eeeec-------ccceeeeee-----cccCcccceeec---ccCCCCceEEEEecCce
Confidence                8                 88888       877777 44     451 14589999   99999999999999999


Q ss_pred             ceeccccccCCCcccccccc--c--ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeee--cccccccCCCeEE
Q psy10942        252 TLEELEKRKTYHFPLFGIFV--P--EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVL--RGHKKGHEKDINC  325 (537)
Q Consensus       252 i~~~iw~~~~~~~~~~~~~~--~--~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~~~~~~v~~  325 (537)
                      +.  +||......+......  .  ...+..+|+... .++++.+..+-+-+||.+.........  ...+......-.+
T Consensus       173 V~--~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P-~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~  249 (609)
T KOG4227|consen  173 VS--FIDNRDRQNPISLVLPANSGKNFYTAEFHPETP-ALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMG  249 (609)
T ss_pred             EE--EEeccCCCCCCceeeecCCCccceeeeecCCCc-eeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhh
Confidence            99  9999886533322111  0  011112222211 688899999999999998665321110  0011111223367


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      +.|+|+|+.|.+--....-.+||+-+...++......+.| +                                      
T Consensus       250 ~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~G-Y--------------------------------------  290 (609)
T KOG4227|consen  250 SLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNG-Y--------------------------------------  290 (609)
T ss_pred             eeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCc-c--------------------------------------
Confidence            8899999998887666666667766222222222211111 0                                      


Q ss_pred             CCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-----------------------ceeeeEeecCCcceEEEEE
Q psy10942        406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-----------------------YVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-----------------------~~~~~~~~~~~~~v~~~~~  462 (537)
                          .-...+.+++|-.|.. +++|+.+-.|++|.+..                       .+.+..+++|..-++.+.|
T Consensus       291 ----~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF  365 (609)
T KOG4227|consen  291 ----CNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRF  365 (609)
T ss_pred             ----eeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceee
Confidence                1111566777776654 89999999999998753                       1235678899999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEEC
Q psy10942        463 INKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      +|...+|++.+-.+.+++|.-
T Consensus       366 ~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  366 SQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             cCCcceEeccchhhheecccc
Confidence            999999999999999999964

>KOG1007|consensus

Probab=99.78  E-value=3.5e-17  Score=135.44  Aligned_cols=186  Identities=24%  Similarity=0.430  Sum_probs=141.9

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----------------cCCCCEEEEEcCCCcEEEE
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----------------HKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------~~~~~~l~~~~~d~~i~i~  380 (537)
                      .+-+.|.|+.|.|++..+++-. |..|.+|++....+.+..+..                 |.+++.+ ....|+++..|
T Consensus       121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv-~tt~d~tl~~~  198 (370)
T KOG1007|consen  121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQV-ATTSDSTLQFW  198 (370)
T ss_pred             HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceE-EEeCCCcEEEE
Confidence            4456899999999999999875 788999999854442332221                 2234444 44568899999


Q ss_pred             ECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCC-ceeeeEeecCCcce
Q psy10942        381 SIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTD-YVCLKSLEGHDASV  457 (537)
Q Consensus       381 d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v  457 (537)
                      |+++..+...++. |..                 .+..+.|+|+. .+|++++.||.|++||++. ..++.++.+|...|
T Consensus       199 D~RT~~~~~sI~dAHgq-----------------~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWv  261 (370)
T KOG1007|consen  199 DLRTMKKNNSIEDAHGQ-----------------RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWV  261 (370)
T ss_pred             Eccchhhhcchhhhhcc-----------------eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEE
Confidence            9999887777653 444                 56667777765 4688999999999999986 56789999999999


Q ss_pred             EEEEEecC-CCEEEEEeCCCcEEEEECCCC-----------------------------eeEEEecCCccceeccCCCCC
Q psy10942        458 LRCHFINK-GTQIVSTGADGLLKLWSIKTS-----------------------------TCVSTFDKHALKIRNSDSEND  507 (537)
Q Consensus       458 ~~~~~s~~-~~~l~s~~~dg~v~vwd~~~~-----------------------------~~~~~~~~~~~~i~~~~~~~~  507 (537)
                      .++.|+|. .++|++++.|..|.+|....-                             ..+.++..|.+.|        
T Consensus       262 W~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSV--------  333 (370)
T KOG1007|consen  262 WAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSV--------  333 (370)
T ss_pred             EEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccce--------
Confidence            99999994 567889999999999975321                             1334667788888        


Q ss_pred             CccccccceeeecCCCEE-EEEeCCCCEEe
Q psy10942        508 HKGFGLPRQLCSRNSDCE-YRGGWSPQVVV  536 (537)
Q Consensus       508 ~~~~~~~~~~~s~~~~~l-~s~~~dg~i~v  536 (537)
                         +++   +||.-..++ |+-+.||.+.|
T Consensus       334 ---Y~~---aWSsadPWiFASLSYDGRviI  357 (370)
T KOG1007|consen  334 ---YAL---AWSSADPWIFASLSYDGRVII  357 (370)
T ss_pred             ---EEE---eeccCCCeeEEEeccCceEEe
Confidence               999   999877766 56689998865

>KOG4227|consensus

Probab=99.77  E-value=2.3e-17  Score=142.21  Aligned_cols=295  Identities=13%  Similarity=0.106  Sum_probs=197.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCc------cceeeeec--cccccceeeeEeecCccccccCCcEEEEEeC
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS------RKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      -||++|.||  .++++|++||.|..+++|+++.      -+++....  +...|-+++  +..        ...++++|+
T Consensus        57 GCiNAlqFS--~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~--F~~--------~N~~~~SG~  124 (609)
T KOG4227|consen   57 GCINALQFS--HNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLE--FDL--------ENRFLYSGE  124 (609)
T ss_pred             cccceeeec--cCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEE--Ecc--------CCeeEecCC
Confidence            399999999  8999999999999999999854      23333332  333455553  344        558999999


Q ss_pred             ccceEEeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         75 EKSLLHYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                      .+++|...|+++.+.+..+.+.   +.|..+..+|..+.|++.+.++.|.+||......       +..+. .+......
T Consensus       125 ~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~-------~~~~~-~~AN~~~~  196 (609)
T KOG4227|consen  125 RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN-------PISLV-LPANSGKN  196 (609)
T ss_pred             CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC-------CCcee-eecCCCcc
Confidence            9999999999999988888766   4999999999999999999999999999987311       12222 22223345


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC-cCeEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE-LKTVT  229 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~-~~~v~  229 (537)
                      ...+.|+|....+|++++..+.    +                 .+||.       +..... +...-+.+-+. ...-.
T Consensus       197 F~t~~F~P~~P~Li~~~~~~~G----~-----------------~~~D~-------R~~~~~~~~~~~~~~L~~~~~~~M  248 (609)
T KOG4227|consen  197 FYTAEFHPETPALILVNSETGG----P-----------------NVFDR-------RMQARPVYQRSMFKGLPQENTEWM  248 (609)
T ss_pred             ceeeeecCCCceeEEeccccCC----C-----------------Cceee-------ccccchHHhhhccccCcccchhhh
Confidence            6788899766777777666655    8                 88998       433322 22111112200 11224


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc-----eEEEEEeCCCeEEEEECCC
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-----ELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~l~~~~~d~~i~i~~~~~  304 (537)
                      +.   .|+|+|+.|.+.-....-.  ++|+.....+....-..+..-+...+-.+.     ..+++|+.+=.|.+|.+..
T Consensus       249 ~~---~~~~~G~Q~msiRR~~~P~--~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~  323 (609)
T KOG4227|consen  249 GS---LWSPSGNQFMSIRRGKCPL--YFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPR  323 (609)
T ss_pred             he---eeCCCCCeehhhhccCCCE--EeeeecccceeEeccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCC
Confidence            55   7999999998876665555  777766221111100000000000000000     5689999999999998753


Q ss_pred             Cceee------------------eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        305 GLKLL------------------NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       305 ~~~~~------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      .....                  .--...+++|..-++.+.|+|...+|++.+-...+++|..-
T Consensus       324 ~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  324 ANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             CccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence            21110                  00123568999999999999999999999999999999754

>KOG2110|consensus

Probab=99.76  E-value=2.2e-16  Score=135.43  Aligned_cols=235  Identities=14%  Similarity=0.185  Sum_probs=166.3

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC--ccceEEe
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG--EKSLLHY   81 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~   81 (537)
                      .+.++.|.  .|...|..|++|| .++++.+........ ..+...-+..+++.        .  +++..+  ....+++
T Consensus         7 ti~~~~~N--qd~~~lsvGs~~G-yk~~~~~~~~k~~~~-~~~~~~IvEmLFSS--------S--LvaiV~~~qpr~Lkv   72 (391)
T KOG2110|consen    7 TINFIGFN--QDSTLLSVGSKDG-YKIFSCSPFEKCFSK-DTEGVSIVEMLFSS--------S--LVAIVSIKQPRKLKV   72 (391)
T ss_pred             ceeeeeec--cceeEEEccCCCc-eeEEecCchHHhhcc-cCCCeEEEEeeccc--------c--eeEEEecCCCceEEE
Confidence            35566677  8888999999999 899988776553222 22333333335555        3  444433  3345999


Q ss_pred             eeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc---hhhhhhhhcc
Q psy10942         82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF---SDEILDIALL  158 (537)
Q Consensus        82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~  158 (537)
                      +++..+..+..+..+..|.++.++.+  .|+++-.+ .|.|||+.+           +++++++..-   ...+.+++++
T Consensus        73 ~~~Kk~~~ICe~~fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~-----------MklLhTI~t~~~n~~gl~AlS~n  138 (391)
T KOG2110|consen   73 VHFKKKTTICEIFFPTSILAVRMNRK--RLVVCLEE-SIYIYDIKD-----------MKLLHTIETTPPNPKGLCALSPN  138 (391)
T ss_pred             EEcccCceEEEEecCCceEEEEEccc--eEEEEEcc-cEEEEeccc-----------ceeehhhhccCCCccceEeeccC
Confidence            99999999999999899999999764  46666664 499999999           8888887654   2234444444


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCc
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                       .++.+++.=....  .|.|                 .+||.       .+-+..  +.     .|  .+++.++   +|
T Consensus       139 -~~n~ylAyp~s~t--~GdV-----------------~l~d~-------~nl~~v~~I~-----aH--~~~lAal---af  181 (391)
T KOG2110|consen  139 -NANCYLAYPGSTT--SGDV-----------------VLFDT-------INLQPVNTIN-----AH--KGPLAAL---AF  181 (391)
T ss_pred             -CCCceEEecCCCC--CceE-----------------EEEEc-------ccceeeeEEE-----ec--CCceeEE---EE
Confidence             3445665432222  3668                 99999       666655  77     99  9999999   99


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      +++|.+||+++..|+|-                                            |++.+.+++.+..+-....
T Consensus       182 s~~G~llATASeKGTVI--------------------------------------------RVf~v~~G~kl~eFRRG~~  217 (391)
T KOG2110|consen  182 SPDGTLLATASEKGTVI--------------------------------------------RVFSVPEGQKLYEFRRGTY  217 (391)
T ss_pred             CCCCCEEEEeccCceEE--------------------------------------------EEEEcCCccEeeeeeCCce
Confidence            99999999999988763                                            3444444444333311111


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                         ...|.+++|+|++++|++.+..++|++|.+.
T Consensus       218 ---~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~  248 (391)
T KOG2110|consen  218 ---PVSIYSLSFSPDSQFLAASSNTETVHIFKLE  248 (391)
T ss_pred             ---eeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence               3568999999999999999999999999998

>KOG1310|consensus

Probab=99.76  E-value=1.3e-16  Score=143.51  Aligned_cols=160  Identities=15%  Similarity=0.185  Sum_probs=116.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      -||+||+|+  .||.+|++|+.|-.+.|||.-..|+++.+.  +...|-++  -++|..      +.+.++++..|..|+
T Consensus        51 GCVN~LeWn--~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsv--KFvP~t------nnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   51 GCVNCLEWN--ADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSV--KFVPYT------NNRIVLSGAGDKLIK  120 (758)
T ss_pred             ceecceeec--CCCCEEeecCCcceEEeecchhcceeeeeecccccceeEE--eeeccC------CCeEEEeccCcceEE
Confidence            499999999  999999999999999999999999999887  44455555  678875      778999999999999


Q ss_pred             eeeccceeh----------hhhcC-CCcceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecc
Q psy10942         81 YYETSAVKE----------LYQHG-LSSPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        81 ~wd~~~~~~----------~~~~~-~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      ++|+...+.          ..... +...|..++-.|++ ..+.++++||+|+-+|+.....-.+...-+.. +..+...
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~-l~ny~~~  199 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSI-LVNYNPQ  199 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHH-HHHhchh
Confidence            999985322          22222 22688999999999 67899999999999999873111000000000 0111111


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccc
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      --...++..+|.+..+|++++.+.-
T Consensus       200 lielk~ltisp~rp~~laVGgsdpf  224 (758)
T KOG1310|consen  200 LIELKCLTISPSRPYYLAVGGSDPF  224 (758)
T ss_pred             hheeeeeeecCCCCceEEecCCCch
Confidence            1235678889888889999888877

>KOG1007|consensus

Probab=99.76  E-value=5.3e-17  Score=134.40  Aligned_cols=287  Identities=19%  Similarity=0.259  Sum_probs=182.5

Q ss_pred             EEEEEeC----CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecc
Q psy10942        110 MYAVVTA----DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLG  185 (537)
Q Consensus       110 ~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~  185 (537)
                      .+.+|+.    |+.|.+.+++.+.+        .-..+.+..|.+.|..++-+|.+.+.|+++.++....+.+ ...   
T Consensus        28 cFlvgTnslK~dNqVhll~~d~e~s--------~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl-~~a---   95 (370)
T KOG1007|consen   28 CFLVGTNSLKEDNQVHLLRLDSEGS--------ELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVL-TGA---   95 (370)
T ss_pred             EEEEeccccCCcceeEEEEecCccc--------hhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcce-eeE---
Confidence            3455553    67788887776321        2334567778889999999987878887777644311111 000   


Q ss_pred             cCCCcchhhHHHHHHHHHhhh--ccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccC
Q psy10942        186 ANRSHNEWFDKTFERILEAKF--KQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKT  261 (537)
Q Consensus       186 ~~~~~~~~~~~~wd~~~~~~~--~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~  261 (537)
                                .||.+..+...  ..+.+++  |.    ..+  -+.|.|+   .|.|++..+++-. |..|.  +|++..
T Consensus        96 ----------aiw~ipe~~~~S~~~tlE~v~~Ld----tea--vg~i~cv---ew~Pns~klasm~-dn~i~--l~~l~e  153 (370)
T KOG1007|consen   96 ----------AIWQIPEPLGQSNSSTLECVASLD----TEA--VGKINCV---EWEPNSDKLASMD-DNNIV--LWSLDE  153 (370)
T ss_pred             ----------EEEecccccCccccchhhHhhcCC----HHH--hCceeeE---EEcCCCCeeEEec-cCceE--EEEccc
Confidence                      45665110000  0111222  11    123  4689999   9999999998776 67788  999988


Q ss_pred             CCcccccccccccce--eeeeeC-----CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-
Q psy10942        262 YHFPLFGIFVPEAEH--GAFYTG-----GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-  333 (537)
Q Consensus       262 ~~~~~~~~~~~~~~~--~~~~~~-----~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-  333 (537)
                      ..........+....  .....+     ...+.++ ...|++++.||+++..+..    .....|...|..+.|+|+.+ 
T Consensus       154 ss~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~-tt~d~tl~~~D~RT~~~~~----sI~dAHgq~vrdlDfNpnkq~  228 (370)
T KOG1007|consen  154 SSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVA-TTSDSTLQFWDLRTMKKNN----SIEDAHGQRVRDLDFNPNKQH  228 (370)
T ss_pred             CcchheeecccccccccceecccccCCCCccceEE-EeCCCcEEEEEccchhhhc----chhhhhcceeeeccCCCCceE
Confidence            643111100000000  000000     1113444 4458999999999877643    33467888999999999865 


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      +|++++.||.|++||.+....++..+..|..                                                 
T Consensus       229 ~lvt~gDdgyvriWD~R~tk~pv~el~~HsH-------------------------------------------------  259 (370)
T KOG1007|consen  229 ILVTCGDDGYVRIWDTRKTKFPVQELPGHSH-------------------------------------------------  259 (370)
T ss_pred             EEEEcCCCccEEEEeccCCCccccccCCCce-------------------------------------------------
Confidence            6788899999999999966666666555543                                                 


Q ss_pred             eeeEEEEcCC-CCEEEEEeCCCcEEEEECCC-----------------------------ceeeeEeecCCcceEEEEEe
Q psy10942        414 GVWFVNFSPL-DRILISSSGDATIKLWCLTD-----------------------------YVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       414 ~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~-----------------------------~~~~~~~~~~~~~v~~~~~s  463 (537)
                      .++++.|+|. .+++++|+.|..|.+|...+                             ...+.++..|.+.|++++||
T Consensus       260 WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWS  339 (370)
T KOG1007|consen  260 WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWS  339 (370)
T ss_pred             EEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeec
Confidence            5566666664 45777888888888885421                             11244677899999999998


Q ss_pred             c-CCCEEEEEeCCCcEEEEECC
Q psy10942        464 N-KGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       464 ~-~~~~l~s~~~dg~v~vwd~~  484 (537)
                      . |.-.+|+-+.||.+.|=.+.
T Consensus       340 sadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  340 SADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             cCCCeeEEEeccCceEEeecCC
Confidence            7 55567888999999886653

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.76  E-value=2.7e-15  Score=146.73  Aligned_cols=311  Identities=27%  Similarity=0.433  Sum_probs=219.4

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccc-eeEEeecchh-hhhhhhc-ccCCCccEEEeeec
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILK-FRKQFVGFSD-EILDIAL-LGEEDSHIVVASNE  171 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~-~v~~~~~-~~~~~~~l~~~~~~  171 (537)
                      +...+..+.|.+.+..++.++.|+.+.+|+...           .. ....+.++.. .+..+.+ . ++...++.....
T Consensus        64 ~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  131 (466)
T COG2319          64 HEDSITSIAFSPDGELLLSGSSDGTIKLWDLDN-----------GEKLIKSLEGLHDSSVSKLALSS-PDGNSILLASSS  131 (466)
T ss_pred             ccceEEEEEECCCCcEEEEecCCCcEEEEEcCC-----------CceeEEEEeccCCCceeeEEEEC-CCcceEEeccCC
Confidence            446899999999999999999999999999988           33 5556665433 5666666 5 444433343333


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                      .+  +.+                 .+|+.       .. ....  +.     .|  ...|..+   +|+|+++.+++++.
T Consensus       132 ~d--~~~-----------------~~~~~-------~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~~~~~~  175 (466)
T COG2319         132 LD--GTV-----------------KLWDL-------STPGKLIRTLE-----GH--SESVTSL---AFSPDGKLLASGSS  175 (466)
T ss_pred             CC--ccE-----------------EEEEe-------cCCCeEEEEEe-----cC--cccEEEE---EECCCCCEEEecCC
Confidence            23  347                 88998       65 2322  66     88  8999999   99999987777764


Q ss_pred             -CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        249 -EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       249 -d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                       |+.++  +|+...                                           ...     ...+..|...|.+++
T Consensus       176 ~~~~~~--~~~~~~-------------------------------------------~~~-----~~~~~~~~~~v~~~~  205 (466)
T COG2319         176 LDGTIK--LWDLRT-------------------------------------------GKP-----LSTLAGHTDPVSSLA  205 (466)
T ss_pred             CCCceE--EEEcCC-------------------------------------------Cce-----EEeeccCCCceEEEE
Confidence             77777  666654                                           111     222334788899999


Q ss_pred             EcCCCC-EEEEEeCCCcEEEEEccCCceeeE-EEE---------ecCCCCEEEEEcCCCcEEEEECCCCee-eeeeccCC
Q psy10942        328 VSPNDK-LLASGSLDKTVKVWSTTGGLKLLN-VLR---------GHKKGTQIVSTGADGLLKLWSIKTSTC-VSTFDKHA  395 (537)
Q Consensus       328 ~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~---------~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~  395 (537)
                      |+|++. .+++++.|+.+++||.. ...... .+.         ..+.+..+++++.++.+++|+...... +..+..|.
T Consensus       206 ~~~~~~~~~~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  284 (466)
T COG2319         206 FSPDGGLLIASGSSDGTIRLWDLS-TGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHS  284 (466)
T ss_pred             EcCCcceEEEEecCCCcEEEEECC-CCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCC
Confidence            999998 55555899999999877 444433 233         344456888999999999999987765 33333332


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee--cCCcceEEEEEecCCCEEEEE-
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKGTQIVST-  472 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~-  472 (537)
                      .                 .+.++.|+|++..+++++.|+.+.+|+..+........  .|...+..+.|.+++..++.+ 
T Consensus       285 ~-----------------~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (466)
T COG2319         285 S-----------------SVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGG  347 (466)
T ss_pred             c-----------------cEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEee
Confidence            2                 77778899988888889889889999998877666665  788889999993332556655 


Q ss_pred             eCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE-EeCCCCEEeC
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR-GGWSPQVVVY  537 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s-~~~dg~i~vW  537 (537)
                      ..|+.+.+|+............+.. +           ..+   .+++ ...++. +..++.+.+|
T Consensus       348 ~~d~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~---~~~~-~~~~~~~~~~~~~~~~~  397 (466)
T COG2319         348 SDDGTIRLWDLRTGKPLKTLEGHSN-V-----------LSV---SFSP-DGRVVSSGSTDGTVRLW  397 (466)
T ss_pred             cCCCcEEeeecCCCceeEEecCCce-E-----------EEE---EECC-CCCEEEEecCCCceEEE
Confidence            6789999999988773333333322 4           566   8888 444444 6788888877

>KOG0649|consensus

Probab=99.75  E-value=4.9e-16  Score=125.56  Aligned_cols=273  Identities=14%  Similarity=0.124  Sum_probs=170.9

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD  177 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~  177 (537)
                      .|.+-+++|.+++|++|..+|.|.+..+..-......+.. ...+...++|+++++.++|.   +.+|+++. ++.    
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~g-k~~iv~eqahdgpiy~~~f~---d~~Lls~g-dG~----   82 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPG-KLKIVPEQAHDGPIYYLAFH---DDFLLSGG-DGL----   82 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCC-CcceeeccccCCCeeeeeee---hhheeecc-Cce----
Confidence            4667789999999999999999999998764433332222 33445668999999999998   56666654 344    


Q ss_pred             ccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccC---CCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGR---DELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h---~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                      |                 +-|......+.....+.. +.   .+-|   .+-..|.++   ...|..+-           
T Consensus        83 V-----------------~gw~W~E~~es~~~K~lwe~~---~P~~~~~~evPeINam---~ldP~enS-----------  128 (325)
T KOG0649|consen   83 V-----------------YGWEWNEEEESLATKRLWEVK---IPMQVDAVEVPEINAM---WLDPSENS-----------  128 (325)
T ss_pred             E-----------------EEeeehhhhhhccchhhhhhc---CccccCcccCCcccee---EeccCCCc-----------
Confidence            6                 444331111100000000 00   0011   002234444   33333322           


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                                                        ++.++.|+.++-||+++++.     ...+++|++.|.++.--....
T Consensus       129 ----------------------------------i~~AgGD~~~y~~dlE~G~i-----~r~~rGHtDYvH~vv~R~~~~  169 (325)
T KOG0649|consen  129 ----------------------------------ILFAGGDGVIYQVDLEDGRI-----QREYRGHTDYVHSVVGRNANG  169 (325)
T ss_pred             ----------------------------------EEEecCCeEEEEEEecCCEE-----EEEEcCCcceeeeeeecccCc
Confidence                                              33334566777777777765     567789999999998855555


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      .+++|+.||++++||.+ +.+.+..+......+                       .+..+...                
T Consensus       170 qilsG~EDGtvRvWd~k-t~k~v~~ie~yk~~~-----------------------~lRp~~g~----------------  209 (325)
T KOG0649|consen  170 QILSGAEDGTVRVWDTK-TQKHVSMIEPYKNPN-----------------------LLRPDWGK----------------  209 (325)
T ss_pred             ceeecCCCccEEEEecc-ccceeEEeccccChh-----------------------hcCcccCc----------------
Confidence            78999999999999999 777777665443311                       01111100                


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      .|-+++-  +..+|++|+. ..+.+|+++..++...+. -..++..+.|..|  .+++++..+.|.-|.+ +|.+....+
T Consensus       210 wigala~--~edWlvCGgG-p~lslwhLrsse~t~vfp-ipa~v~~v~F~~d--~vl~~G~g~~v~~~~l-~Gvl~a~ip  282 (325)
T KOG0649|consen  210 WIGALAV--NEDWLVCGGG-PKLSLWHLRSSESTCVFP-IPARVHLVDFVDD--CVLIGGEGNHVQSYTL-NGVLQANIP  282 (325)
T ss_pred             eeEEEec--cCceEEecCC-CceeEEeccCCCceEEEe-cccceeEeeeecc--eEEEeccccceeeeee-ccEEEEecc
Confidence            3333433  4457887764 689999999988877776 4567888888655  7888888889999987 566665555


Q ss_pred             CCccce
Q psy10942        494 KHALKI  499 (537)
Q Consensus       494 ~~~~~i  499 (537)
                      ......
T Consensus       283 ~~s~~c  288 (325)
T KOG0649|consen  283 VESTAC  288 (325)
T ss_pred             CCccce
Confidence            444333

>KOG1188|consensus

Probab=99.75  E-value=9.2e-18  Score=142.19  Aligned_cols=278  Identities=10%  Similarity=0.117  Sum_probs=187.8

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeeccccc-cceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYES-LETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL   95 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~   95 (537)
                      ..++++-.+|.|++||..+++.+..++...+ +..+.|+-..        ....+++++.||.|++||+.+......+..
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d--------s~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~  112 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD--------SPHGVISCSSDGTVRLWDIRSQAESARISW  112 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC--------CCCeeEEeccCCeEEEEEeecchhhhheec
Confidence            4578888899999999999999998885444 4445443211        335789999999999999998877666553


Q ss_pred             C----cceEEEEEeccccEEEEEeC----CceEEEEecccccCcccccccccc-eeEEeecchhhhhhhhcccCCCccEE
Q psy10942         96 S----SPLVRIVRSSVKRMYAVVTA----DHNISLYRLNSETGLEERPNKILK-FRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        96 ~----~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      .    .+..+++..-.++.+++|+.    +-.|.+||+...          .+ +......|.+.|++++|+|.+.+.|+
T Consensus       113 ~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~----------qq~l~~~~eSH~DDVT~lrFHP~~pnlLl  182 (376)
T KOG1188|consen  113 TQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSE----------QQLLRQLNESHNDDVTQLRFHPSDPNLLL  182 (376)
T ss_pred             cCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccc----------cchhhhhhhhccCcceeEEecCCCCCeEE
Confidence            3    36777777778888888864    567999999984          33 33455779999999999999999999


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC-Cee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLF  243 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l  243 (537)
                      +++.++-    +                 .++|+       +.....  |.  ....|  ...|.++   .|..++ +.+
T Consensus       183 SGSvDGL----v-----------------nlfD~-------~~d~EeDaL~--~viN~--~sSI~~i---gw~~~~ykrI  227 (376)
T KOG1188|consen  183 SGSVDGL----V-----------------NLFDT-------KKDNEEDALL--HVINH--GSSIHLI---GWLSKKYKRI  227 (376)
T ss_pred             eecccce----E-----------------Eeeec-------CCCcchhhHH--Hhhcc--cceeeee---eeecCCcceE
Confidence            9998887    8                 88888       333222  11  01145  6779999   898877 567


Q ss_pred             eeccCCCcceeccccccCCCcccccccc-----------cccceeeeeeCCcceEEEEEeC-CCeEEEEECC--CCceee
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFV-----------PEAEHGAFYTGGTVELLASGSL-DKTVKVWSTT--GGLKLL  309 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~l~~~~~-d~~i~i~~~~--~~~~~~  309 (537)
                      .+-+..++..  +|++..+.........           ..-..+..|........+.++. -+...++-+.  ......
T Consensus       228 ~clTH~Etf~--~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~  305 (376)
T KOG1188|consen  228 MCLTHMETFA--IYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLL  305 (376)
T ss_pred             EEEEccCcee--EEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeeccccccc
Confidence            7888888999  9999886522211000           0011122222211133333333 4555554433  211111


Q ss_pred             eeeccccc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        310 NVLRGHKK-GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       310 ~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      .. ...+. +|..-|+++.|...+..+++|+.||.+.+|...
T Consensus       306 ~~-~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  306 TE-PAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE  346 (376)
T ss_pred             Cc-cccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence            11 22233 477788999998889999999999999999854

>KOG1517|consensus

Probab=99.75  E-value=1.4e-16  Score=154.12  Aligned_cols=283  Identities=13%  Similarity=0.086  Sum_probs=184.1

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc----ccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF----VPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      ..+...+   .|+|-...++++.....|+  +||.+.+........    ...+..+..-......++++++.||.|+||
T Consensus      1064 ~~~pk~~---~~hpf~p~i~~ad~r~~i~--vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIw 1138 (1387)
T KOG1517|consen 1064 NQPPKTL---KFHPFEPQIAAADDRERIR--VWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIW 1138 (1387)
T ss_pred             CCCCcee---eecCCCceeEEcCCcceEE--EEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEe
Confidence            3445666   7888888999998888899  999988432100000    000111111111222789999999999999


Q ss_pred             ECCCCc-eeeee------ecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----------c
Q psy10942        301 STTGGL-KLLNV------LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----------H  362 (537)
Q Consensus       301 ~~~~~~-~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------~  362 (537)
                      +--... ...++      +.....+..+.=.-+.|..+..+|++++.-..|+|||.. .......+..           .
T Consensus      1139 k~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~-~E~~~~diP~~s~t~vTaLS~~ 1217 (1387)
T KOG1517|consen 1139 KDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAH-KEQVVADIPYGSSTLVTALSAD 1217 (1387)
T ss_pred             cccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecc-cceeEeecccCCCccceeeccc
Confidence            743321 11111      011111111222445677666677777778999999998 4444333322           2


Q ss_pred             C-CCCEEEEEcCCCcEEEEECCCCe---eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEE
Q psy10942        363 K-KGTQIVSTGADGLLKLWSIKTST---CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIK  437 (537)
Q Consensus       363 ~-~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~  437 (537)
                      . .|+.+++|..||.+++||.+...   .+..++.|....               +|..+.+.+.|- .|++|+.||.|+
T Consensus      1218 ~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~---------------~Iv~~slq~~G~~elvSgs~~G~I~ 1282 (1387)
T KOG1517|consen 1218 LVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVE---------------PIVHLSLQRQGLGELVSGSQDGDIQ 1282 (1387)
T ss_pred             ccCCceEEEeecCCceEEeecccCCccccceeecccCCcc---------------cceeEEeecCCCcceeeeccCCeEE
Confidence            1 27999999999999999998653   355566666531               355566666553 599999999999


Q ss_pred             EEECCCceee--eEeecCC--c-ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942        438 LWCLTDYVCL--KSLEGHD--A-SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG  512 (537)
Q Consensus       438 i~d~~~~~~~--~~~~~~~--~-~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  512 (537)
                      +||++.....  .....|.  + ..+++..+++...+|+|+. +.|+||++ .|+.+..++.+..-.       .++..+
T Consensus      1283 ~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~-~G~~l~~~k~n~~F~-------~q~~gs 1353 (1387)
T KOG1517|consen 1283 LLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL-SGEQLNIIKYNPGFM-------GQRIGS 1353 (1387)
T ss_pred             EEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec-ChhhhcccccCcccc-------cCcCCC
Confidence            9999874222  2223333  3 5899999999999999998 89999998 577777766543221       112244


Q ss_pred             ccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        513 LPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       513 ~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..+++|+|-.-+||.|+.|..|.||
T Consensus      1354 ~scL~FHP~~~llAaG~~Ds~V~iY 1378 (1387)
T KOG1517|consen 1354 VSCLAFHPHRLLLAAGSADSTVSIY 1378 (1387)
T ss_pred             cceeeecchhHhhhhccCCceEEEe
Confidence            4455999999999999999999886

>KOG0303|consensus

Probab=99.75  E-value=2e-16  Score=136.68  Aligned_cols=191  Identities=19%  Similarity=0.335  Sum_probs=149.1

Q ss_pred             ccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCC------ceeeEEEEecCC-----------CCEEEEEcCCC
Q psy10942        314 GHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGG------LKLLNVLRGHKK-----------GTQIVSTGADG  375 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~-----------~~~l~~~~~d~  375 (537)
                      ....+|.++|..++|+| +.+.+|+|+.|.+|.+|.+...      .+++..+.+|..           .+.|++++.|+
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn  154 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN  154 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence            34679999999999999 6678999999999999998732      234555555543           67889999999


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA  455 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  455 (537)
                      +|.+|++.+++.+.++. |..                 .|+++.|+.||.+|++.+.|..|+|||.++++.+..-.+|.+
T Consensus       155 ~v~iWnv~tgeali~l~-hpd-----------------~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG  216 (472)
T KOG0303|consen  155 TVSIWNVGTGEALITLD-HPD-----------------MVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG  216 (472)
T ss_pred             eEEEEeccCCceeeecC-CCC-----------------eEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccC
Confidence            99999999999888877 655                 788889999999999999999999999999999999888876


Q ss_pred             c-eEEEEEecCCCEEEEEe---CCCcEEEEECCCC---eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        456 S-VLRCHFINKGTQIVSTG---ADGLLKLWSIKTS---TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       456 ~-v~~~~~s~~~~~l~s~~---~dg~v~vwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      . -..+.|-.++.++-||-   .+..+.+||..+-   -.+..+...++.+           ..    -+.||.+.|+.+
T Consensus       217 ~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl-----------~P----FyD~dt~ivYl~  281 (472)
T KOG0303|consen  217 AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVL-----------LP----FYDPDTSIVYLC  281 (472)
T ss_pred             CCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceE-----------Ee----eecCCCCEEEEE
Confidence            4 45667888888444442   3678999987553   2334454444433           33    478899988765


Q ss_pred             e-CCCCEEeC
Q psy10942        529 G-WSPQVVVY  537 (537)
Q Consensus       529 ~-~dg~i~vW  537 (537)
                      | .|+.||-|
T Consensus       282 GKGD~~IRYy  291 (472)
T KOG0303|consen  282 GKGDSSIRYF  291 (472)
T ss_pred             ecCCcceEEE
Confidence            5 58888854

>KOG1524|consensus

Probab=99.75  E-value=1.8e-16  Score=142.32  Aligned_cols=265  Identities=11%  Similarity=0.017  Sum_probs=168.0

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccc-eeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK-QLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      +.|.|+.++  .....+++++.+-.+.-||+.+.. .+..+|...-.+.+  ...+. ..-+.++...++..+.||.+.+
T Consensus        15 e~vc~v~w~--~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~--h~~~r-s~~~g~~~d~~~i~s~DGkf~i   89 (737)
T KOG1524|consen   15 EKVCCVDWS--SNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDM--HLGGR-SSGGGKGSDTLLICSNDGRFVI   89 (737)
T ss_pred             eeEEeeccc--ccceEEEeccCceEEEeecccchhhhhhhCCcccCCccc--ccccc-ccCCCCCcceEEEEcCCceEEE
Confidence            456688888  666667776666656566665432 23333322111222  11111 1112223356777777999888


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      .+ ..++.-.....| +.+.+-.|+|||.-|+++++||.|++|+-.+            .+..++.....+|+|++|. |
T Consensus        90 l~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG------------MLRStl~Q~~~~v~c~~W~-p  155 (737)
T KOG1524|consen   90 LN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG------------MLRSTVVQNEESIRCARWA-P  155 (737)
T ss_pred             ec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc------------hHHHHHhhcCceeEEEEEC-C
Confidence            87 456666666655 7999999999999999999999999999765            5555666667789999999 5


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc-ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ-KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~-l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      +.+.++.+.++.     +                 .+=.+       .... .. .+     .|  .+-|.++   .|++
T Consensus       156 ~S~~vl~c~g~h-----~-----------------~IKpL-------~~n~k~i~Wk-----AH--DGiiL~~---~W~~  196 (737)
T KOG1524|consen  156 NSNSIVFCQGGH-----I-----------------SIKPL-------AANSKIIRWR-----AH--DGLVLSL---SWST  196 (737)
T ss_pred             CCCceEEecCCe-----E-----------------EEeec-------ccccceeEEe-----cc--CcEEEEe---ecCc
Confidence            666665655443     3                 22111       1111 11 45     99  9999999   9999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ..+.+++|+.|-..+  +||......-.......++....+.+            |....+|...+..        ..+.
T Consensus       197 ~s~lI~sgGED~kfK--vWD~~G~~Lf~S~~~ey~ITSva~np------------d~~~~v~S~nt~R--------~~~p  254 (737)
T KOG1524|consen  197 QSNIIASGGEDFRFK--IWDAQGANLFTSAAEEYAITSVAFNP------------EKDYLLWSYNTAR--------FSSP  254 (737)
T ss_pred             cccceeecCCceeEE--eecccCcccccCChhccceeeeeecc------------ccceeeeeeeeee--------ecCC
Confidence            999999999999999  99987632111111111121221111            2223344433322        1234


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVW  347 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~  347 (537)
                      ..+.|..++||+||..++.|+..|.+.+=
T Consensus       255 ~~GSifnlsWS~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  255 RVGSIFNLSWSADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             CccceEEEEEcCCCceeeccccCceEEEe
Confidence            46789999999999999999999977553

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.74  E-value=3.2e-16  Score=145.11  Aligned_cols=333  Identities=12%  Similarity=0.063  Sum_probs=187.4

Q ss_pred             cceE-EEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC
Q psy10942         16 SEFS-VHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG   94 (537)
Q Consensus        16 ~~~l-~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~   94 (537)
                      ++++ ++-..+|.|.+.|.++.+.+.+++........ ..+.|        +++++++++.||.|.++|+.+++.+.++.
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~-~~~s~--------Dgr~~yv~~rdg~vsviD~~~~~~v~~i~   75 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAG-LKFSP--------DGRYLYVANRDGTVSVIDLATGKVVATIK   75 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEE-EE-TT---------SSEEEEEETTSEEEEEETTSSSEEEEEE
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeE-EEecC--------CCCEEEEEcCCCeEEEEECCcccEEEEEe
Confidence            3445 45567899999999999999999965554332 23456        77888888899999999999999999999


Q ss_pred             CCcceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeEEeecch-------hhhhhhhcccCCCccEE
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRKQFVGFS-------DEILDIALLGEEDSHIV  166 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~  166 (537)
                      .......+++|+||++++++. .++.+.++|.++           .+.++.+....       ..+.++..+ +....++
T Consensus        76 ~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~t-----------le~v~~I~~~~~~~~~~~~Rv~aIv~s-~~~~~fV  143 (369)
T PF02239_consen   76 VGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAET-----------LEPVKTIPTGGMPVDGPESRVAAIVAS-PGRPEFV  143 (369)
T ss_dssp             -SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT-------------EEEEEE--EE-TTTS---EEEEEE--SSSSEEE
T ss_pred             cCCCcceEEEcCCCCEEEEEecCCCceeEecccc-----------ccceeecccccccccccCCCceeEEec-CCCCEEE
Confidence            888899999999999988776 578999999999           78888776542       234555556 3344333


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++-.+..   .|                 .+-|.       ...... ..   ....  .......   .|+|++++++.
T Consensus       144 v~lkd~~---~I-----------------~vVdy-------~d~~~~~~~---~i~~--g~~~~D~---~~dpdgry~~v  188 (369)
T PF02239_consen  144 VNLKDTG---EI-----------------WVVDY-------SDPKNLKVT---TIKV--GRFPHDG---GFDPDGRYFLV  188 (369)
T ss_dssp             EEETTTT---EE-----------------EEEET-------TTSSCEEEE---EEE----TTEEEE---EE-TTSSEEEE
T ss_pred             EEEccCC---eE-----------------EEEEe-------cccccccee---eecc--ccccccc---ccCcccceeee
Confidence            4333321   14                 22233       221111 11   0012  3345566   78888887765


Q ss_pred             c-cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        246 Q-SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       246 ~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      + ..+..+.  ++|....                                ..+.+.+.  ++          ..|..++.
T Consensus       189 a~~~sn~i~--viD~~~~--------------------------------k~v~~i~~--g~----------~p~~~~~~  222 (369)
T PF02239_consen  189 AANGSNKIA--VIDTKTG--------------------------------KLVALIDT--GK----------KPHPGPGA  222 (369)
T ss_dssp             EEGGGTEEE--EEETTTT--------------------------------EEEEEEE---SS----------SBEETTEE
T ss_pred             cccccceeE--EEeeccc--------------------------------eEEEEeec--cc----------cccccccc
Confidence            4 3334455  5555442                                11122222  11          12333333


Q ss_pred             EEEEcCCC-CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        325 CVTVSPND-KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       325 ~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      .+ .+|.. ...++... +..          .+..+.             .+.+.+||..+.+.++++.....       
T Consensus       223 ~~-php~~g~vw~~~~~-~~~----------~~~~ig-------------~~~v~v~d~~~wkvv~~I~~~G~-------  270 (369)
T PF02239_consen  223 NF-PHPGFGPVWATSGL-GYF----------AIPLIG-------------TDPVSVHDDYAWKVVKTIPTQGG-------  270 (369)
T ss_dssp             EE-EETTTEEEEEEEBS-SSS----------EEEEEE---------------TTT-STTTBTSEEEEEE-SSS-------
T ss_pred             cc-cCCCcceEEeeccc-cce----------eccccc-------------CCccccchhhcCeEEEEEECCCC-------
Confidence            33 22322 11111111 100          000010             01222445555555555544332       


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEE----eCCCcEEEEECCCceeeeEeecCC-cceEEEEEecCCCEEEEEeCC--C
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISS----SGDATIKLWCLTDYVCLKSLEGHD-ASVLRCHFINKGTQIVSTGAD--G  476 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~d--g  476 (537)
                                + ..+..+|+++++.+.    ...+.|.++|.++.+.+..+.... ..+..+.|+++|+++..+..+  +
T Consensus       271 ----------g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~  339 (369)
T PF02239_consen  271 ----------G-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNG  339 (369)
T ss_dssp             ----------S---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TT
T ss_pred             ----------c-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCC
Confidence                      3 556778899998887    445899999999998887775322 358999999999987765543  3


Q ss_pred             cEEEEECCCCeeEEEec
Q psy10942        477 LLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       477 ~v~vwd~~~~~~~~~~~  493 (537)
                      .|.+||..+.+++..+.
T Consensus       340 ~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  340 AIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             EEEEEETTTTEEEEEEE
T ss_pred             EEEEEECCCcEEEEEEE
Confidence            69999999999998886

...

>KOG0642|consensus

Probab=99.73  E-value=8.7e-17  Score=145.30  Aligned_cols=240  Identities=15%  Similarity=0.134  Sum_probs=166.9

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      .|  ...|..+   +|.|....|++++.|+.+.  +|++......                         +  .+     
T Consensus       292 s~--~d~ir~l---~~~~sep~lit~sed~~lk--~WnLqk~~~s-------------------------~--~~-----  332 (577)
T KOG0642|consen  292 SH--DDCIRAL---AFHPSEPVLITASEDGTLK--LWNLQKAKKS-------------------------A--EK-----  332 (577)
T ss_pred             cc--hhhhhhh---hcCCCCCeEEEeccccchh--hhhhcccCCc-------------------------c--cc-----
Confidence            67  7788888   8888888888888888888  8888431000                         0  00     


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------eeeE----------EEEe
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL---------KLLN----------VLRG  361 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~----------~~~~  361 (537)
                         .-++     ...+.+|.++|.|+++.++++.+++|+.||+|+.|++....         ....          .+..
T Consensus       333 ---~~ep-----i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~  404 (577)
T KOG0642|consen  333 ---DVEP-----ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLAL  404 (577)
T ss_pred             ---ceee-----eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeee
Confidence               0011     34567899999999999999999999999999999765211         1122          3334


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWC  440 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d  440 (537)
                      ++....|++++.||+++.|+.....+ .++.......               ...++.+-... ...++...-+.-.+++
T Consensus       405 s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g---------------~Plsvd~~ss~~a~~~~s~~~~~~~~~~  468 (577)
T KOG0642|consen  405 SSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHG---------------YPLSVDRTSSRPAHSLASFRFGYTSIDD  468 (577)
T ss_pred             cccccceeeecCCceEEeeccCCcCc-cccCCccccC---------------CcceEeeccchhHhhhhhcccccccchh
Confidence            44567899999999999999887766 3332222111               11222222211 1122222223333334


Q ss_pred             CCCceeeeEeecC-------CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        441 LTDYVCLKSLEGH-------DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       441 ~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      ......+..+...       ...+..+.++|.+.+.+++..|+.|+++|..+++++.....|...+           +++
T Consensus       469 ~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~sv-----------tsl  537 (577)
T KOG0642|consen  469 MEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSV-----------TSL  537 (577)
T ss_pred             hhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeecccee-----------cce
Confidence            4443333333211       1346788899999999999999999999999999999999999999           999


Q ss_pred             cceeeecCCCEEEEEeCCCCEEeC
Q psy10942        514 PRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                         ++.|+|.+|++++.|+.+++|
T Consensus       538 ---ai~~ng~~l~s~s~d~sv~l~  558 (577)
T KOG0642|consen  538 ---AIDPNGPYLMSGSHDGSVRLW  558 (577)
T ss_pred             ---eecCCCceEEeecCCceeehh
Confidence               999999999999999999998

>KOG0290|consensus

Probab=99.73  E-value=2.1e-16  Score=130.99  Aligned_cols=207  Identities=15%  Similarity=0.200  Sum_probs=143.8

Q ss_pred             cCCCcCeEEEEeccCcccCC-----CeeeeccCCCcceeccccccCCCcccccc--cc--------cccceeeeeeCCcc
Q psy10942        221 GRDELKTVTLLERGKTVKEE-----DLFPRQSMEPSTLEELEKRKTYHFPLFGI--FV--------PEAEHGAFYTGGTV  285 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-----~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~v  285 (537)
                      .|  .-+++.+   .|.|+.     ++||+.+  ..+|  +|++...+....+.  +.        .++..+....- .-
T Consensus        94 d~--~YP~tK~---~wiPd~~g~~pdlLATs~--D~LR--lWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~-dp  163 (364)
T KOG0290|consen   94 DH--PYPVTKL---MWIPDSKGVYPDLLATSS--DFLR--LWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV-DP  163 (364)
T ss_pred             CC--CCCccce---EecCCccccCcchhhccc--CeEE--EEeccCcCCceehhhhhccCcccccCCcccccccccC-Cc
Confidence            67  8889999   899876     3555554  4799  99998643333221  00        11111111110 01


Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCceeeEEEEecCC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  364 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  364 (537)
                      +++.+.+-|-+..|||++++...  .....+-.|..+|..++|...+ +.|++.+.||.+++||++ ....-..+-..+.
T Consensus       164 ~~igtSSiDTTCTiWdie~~~~~--~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR-~leHSTIIYE~p~  240 (364)
T KOG0290|consen  164 NLIGTSSIDTTCTIWDIETGVSG--TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR-SLEHSTIIYEDPS  240 (364)
T ss_pred             ceeEeecccCeEEEEEEeecccc--ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec-ccccceEEecCCC
Confidence            79999999999999999987321  1145677899999999999855 578899999999999999 3221111111111


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCC-CcEEEEECC
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGD-ATIKLWCLT  442 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d-g~i~i~d~~  442 (537)
                                                   ...                 +...++|+++. +++|+-..| ..|.|.|++
T Consensus       241 -----------------------------~~~-----------------pLlRLswnkqDpnymATf~~dS~~V~iLDiR  274 (364)
T KOG0290|consen  241 -----------------------------PST-----------------PLLRLSWNKQDPNYMATFAMDSNKVVILDIR  274 (364)
T ss_pred             -----------------------------CCC-----------------cceeeccCcCCchHHhhhhcCCceEEEEEec
Confidence                                         011                 45556666654 567765544 579999998


Q ss_pred             C-ceeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCCC
Q psy10942        443 D-YVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       443 ~-~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      . ..++..+++|.+.|+.++|.| ....|+++++|..+-+||+.+.
T Consensus       275 ~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~  320 (364)
T KOG0290|consen  275 VPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM  320 (364)
T ss_pred             CCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence            6 578899999999999999999 4678999999999999999753

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.73  E-value=2.1e-15  Score=140.55  Aligned_cols=286  Identities=13%  Similarity=0.129  Sum_probs=169.8

Q ss_pred             EEEeCccceEEeeeccc-ee--hhhhcCCCcceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeEEe
Q psy10942         70 VLAGGEKSLLHYYETSA-VK--ELYQHGLSSPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        70 ~~~~~~~~~i~~wd~~~-~~--~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +++...++.|++||+.+ ++  .+..+...+....++++|++++|++++ .++.|.+|+++.. ..       .......
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~-g~-------l~~~~~~   76 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADD-GA-------LTFAAES   76 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCC-Cc-------eEEeeee
Confidence            34446688999999964 33  455555556788999999999987765 4788999998731 00       1222222


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCc
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDEL  225 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~  225 (537)
                      . ..+....++|+ ++++.++++... +  +.+                 .+|++       ..............+  .
T Consensus        77 ~-~~~~p~~i~~~-~~g~~l~v~~~~-~--~~v-----------------~v~~~-------~~~g~~~~~~~~~~~--~  125 (330)
T PRK11028         77 P-LPGSPTHISTD-HQGRFLFSASYN-A--NCV-----------------SVSPL-------DKDGIPVAPIQIIEG--L  125 (330)
T ss_pred             c-CCCCceEEEEC-CCCCEEEEEEcC-C--CeE-----------------EEEEE-------CCCCCCCCceeeccC--C
Confidence            2 22345678899 777777766532 2  447                 77777       422111000000012  2


Q ss_pred             CeEEEEeccCcccCCCeeee-ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        226 KTVTLLERGKTVKEEDLFPR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ....++   +++|+++++++ ...++.|.  +|++....                                .+.   ...
T Consensus       126 ~~~~~~---~~~p~g~~l~v~~~~~~~v~--v~d~~~~g--------------------------------~l~---~~~  165 (330)
T PRK11028        126 EGCHSA---NIDPDNRTLWVPCLKEDRIR--LFTLSDDG--------------------------------HLV---AQE  165 (330)
T ss_pred             CcccEe---EeCCCCCEEEEeeCCCCEEE--EEEECCCC--------------------------------ccc---ccC
Confidence            345667   78999988754 44457777  77775411                                000   000


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCC-c--eeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGG-L--KLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~-~--~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                      ..      ..... .......++|+|++++++++.. ++.|.+|++... .  +.+..+...+.                
T Consensus       166 ~~------~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~----------------  222 (330)
T PRK11028        166 PA------EVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPA----------------  222 (330)
T ss_pred             CC------ceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCC----------------
Confidence            00      00000 1123467899999999988876 899999999732 1  11111111110                


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCceeeeEeecC---Ccc
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKSLEGH---DAS  456 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~---~~~  456 (537)
                               ..... .                 ....+.++|++++++++.. ++.|.+|++.......++.++   ...
T Consensus       223 ---------~~~~~-~-----------------~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~  275 (330)
T PRK11028        223 ---------DFSDT-R-----------------WAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQ  275 (330)
T ss_pred             ---------cCCCC-c-----------------cceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecccc
Confidence                     00000 0                 2345889999999998854 689999998653222222222   124


Q ss_pred             eEEEEEecCCCEEEEEeC-CCcEEEEECC
Q psy10942        457 VLRCHFINKGTQIVSTGA-DGLLKLWSIK  484 (537)
Q Consensus       457 v~~~~~s~~~~~l~s~~~-dg~v~vwd~~  484 (537)
                      ...+.++|+|++|+++.. +++|.+|+++
T Consensus       276 p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        276 PRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             CCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            567899999999998775 8999999874

>KOG1524|consensus

Probab=99.72  E-value=1e-15  Score=137.52  Aligned_cols=257  Identities=16%  Similarity=0.166  Sum_probs=182.2

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---cccccceeeeeeC---CcceEEEEEeCC
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---FVPEAEHGAFYTG---GTVELLASGSLD  294 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~---~~v~~l~~~~~d  294 (537)
                      .|  ...+.|+   .|+.+...+.+++++..+.  -|++..........   +.|+...+.+...   ..-..++.++.|
T Consensus        12 r~--~e~vc~v---~w~~~eei~~~~dDh~~~~--~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~D   84 (737)
T KOG1524|consen   12 RN--SEKVCCV---DWSSNEEIYFVSDDHQIFK--WSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSND   84 (737)
T ss_pred             cc--ceeEEee---cccccceEEEeccCceEEE--eecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCC
Confidence            56  6778888   8888887777777666666  66665543222111   1111111111111   122788999999


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC--------CceeeEEEEecCCCC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG--------GLKLLNVLRGHKKGT  366 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~--------~~~~~~~~~~~~~~~  366 (537)
                      |.+.+.+-...-      ......|.+.+.+-.|+|||.-|++++.||.|++|.-..        ....+......++.+
T Consensus        85 Gkf~il~k~~rV------E~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~  158 (737)
T KOG1524|consen   85 GRFVILNKSARV------ERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSN  158 (737)
T ss_pred             ceEEEecccchh------hhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCC
Confidence            999998866543      556789999999999999999999999999999998652        345667777766655


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC  446 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~  446 (537)
                      .++-+. .+.+.+=.+.....+.....|.+                 -|.++.|++...++++|++|-..++||.. |..
T Consensus       159 ~vl~c~-g~h~~IKpL~~n~k~i~WkAHDG-----------------iiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~  219 (737)
T KOG1524|consen  159 SIVFCQ-GGHISIKPLAANSKIIRWRAHDG-----------------LVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GAN  219 (737)
T ss_pred             ceEEec-CCeEEEeecccccceeEEeccCc-----------------EEEEeecCccccceeecCCceeEEeeccc-Ccc
Confidence            444332 34455555555555566666665                 67888899999999999999999999965 566


Q ss_pred             eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      +..-..|.-+|++++|.|+ +.++.++.+ ++|+=           ....+.|           ..+   +||+||..++
T Consensus       220 Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~~-----------~p~~GSi-----------fnl---sWS~DGTQ~a  272 (737)
T KOG1524|consen  220 LFTSAAEEYAITSVAFNPE-KDYLLWSYN-TARFS-----------SPRVGSI-----------FNL---SWSADGTQAT  272 (737)
T ss_pred             cccCChhccceeeeeeccc-cceeeeeee-eeeec-----------CCCccce-----------EEE---EEcCCCceee
Confidence            7777789999999999999 566655543 45421           1234567           888   9999999999


Q ss_pred             EEeCCCCEEe
Q psy10942        527 RGGWSPQVVV  536 (537)
Q Consensus       527 s~~~dg~i~v  536 (537)
                      .|+..|.+.+
T Consensus       273 ~gt~~G~v~~  282 (737)
T KOG1524|consen  273 CGTSTGQLIV  282 (737)
T ss_pred             ccccCceEEE
Confidence            9998888753

>KOG4497|consensus

Probab=99.72  E-value=1.4e-16  Score=134.34  Aligned_cols=279  Identities=13%  Similarity=0.151  Sum_probs=188.6

Q ss_pred             CcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        235 KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      .|||+|+++|+++.- .+.  +-|..+-+..........+..+.... .+...+.....++.|.+|++...+-.     .
T Consensus        15 ~fSp~g~yiAs~~~y-rlv--iRd~~tlq~~qlf~cldki~yieW~a-ds~~ilC~~yk~~~vqvwsl~Qpew~-----c   85 (447)
T KOG4497|consen   15 SFSPCGNYIASLSRY-RLV--IRDSETLQLHQLFLCLDKIVYIEWKA-DSCHILCVAYKDPKVQVWSLVQPEWY-----C   85 (447)
T ss_pred             eECCCCCeeeeeeee-EEE--EeccchhhHHHHHHHHHHhhheeeec-cceeeeeeeeccceEEEEEeecceeE-----E
Confidence            689999999999876 333  55555422111000001111222221 22256677788999999999988753     3


Q ss_pred             cccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCC--------ceeeEEEEecCCCCEEEEEcCCCcEE---EEEC
Q psy10942        315 HKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG--------LKLLNVLRGHKKGTQIVSTGADGLLK---LWSI  382 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~l~~~~~d~~i~---i~d~  382 (537)
                      .......++..+.|||||+ .|.+...|-.|.+|.+.+.        ...++.+..|++|++.+..+......   +...
T Consensus        86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c  165 (447)
T KOG4497|consen   86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSC  165 (447)
T ss_pred             EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhh
Confidence            3456678899999999995 4556667899999999842        22346677788888888777653322   2222


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEE---------------eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIIT---------------GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL  447 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~  447 (537)
                      +.-+.++.+.........+.|+|+|..++.               -++..++|+|.+++|++|+.|+.+++.+--+.++.
T Consensus       166 ~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f  245 (447)
T KOG4497|consen  166 KAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPF  245 (447)
T ss_pred             HHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeeh
Confidence            233456667777778888999999988874               26889999999999999999999998654221111


Q ss_pred             ------------------------------------------------------------eEee------cCCcceEEEE
Q psy10942        448 ------------------------------------------------------------KSLE------GHDASVLRCH  461 (537)
Q Consensus       448 ------------------------------------------------------------~~~~------~~~~~v~~~~  461 (537)
                                                                                  ..++      ...-.+--++
T Consensus       246 ~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~la  325 (447)
T KOG4497|consen  246 GEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLA  325 (447)
T ss_pred             hhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceee
Confidence                                                                        0111      1122356789


Q ss_pred             EecCCCEEEEEeCC--CcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        462 FINKGTQIVSTGAD--GLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       462 ~s~~~~~l~s~~~d--g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |++|..+++|-.+.  +.+-+||++.-++...+. ...+|           .+.   .|.|....|+.+.....+.+|
T Consensus       326 fs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~pi-----------raf---~WdP~~prL~vctg~srLY~W  388 (447)
T KOG4497|consen  326 FSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPI-----------RAF---EWDPGRPRLVVCTGKSRLYFW  388 (447)
T ss_pred             ecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccce-----------eEE---EeCCCCceEEEEcCCceEEEE
Confidence            99999999987543  679999998766554443 44567           777   899999988887766667666

>KOG0644|consensus

Probab=99.72  E-value=1.6e-17  Score=156.46  Aligned_cols=284  Identities=15%  Similarity=0.194  Sum_probs=206.9

Q ss_pred             hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      .+..+.+| .+|.|+.|...|.++++|+.|..++||..++           ..+...++||.+.++.++.+ .+..++++
T Consensus       182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et-----------~~~lAs~rGhs~ditdlavs-~~n~~iaa  249 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMET-----------ARCLASCRGHSGDITDLAVS-SNNTMIAA  249 (1113)
T ss_pred             HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccc-----------hhhhccCCCCccccchhccc-hhhhhhhh
Confidence            34445544 5899999999999999999999999999999           78999999999999999998 67777788


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++.+.-    |                 ++|.+       +.+..+  +.     ||  ++.|+++   +|+|-.    +
T Consensus       250 aS~D~v----I-----------------rvWrl-------~~~~pvsvLr-----gh--tgavtai---afsP~~----s  287 (1113)
T KOG0644|consen  250 ASNDKV----I-----------------RVWRL-------PDGAPVSVLR-----GH--TGAVTAI---AFSPRA----S  287 (1113)
T ss_pred             cccCce----E-----------------EEEec-------CCCchHHHHh-----cc--ccceeee---ccCccc----c
Confidence            888877    9                 99999       888877  88     99  9999999   999965    7


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      .+.||+++  +||.+-..                                  ++|-..-.+          .....-+.+
T Consensus       288 ss~dgt~~--~wd~r~~~----------------------------------~~y~prp~~----------~~~~~~~~s  321 (1113)
T KOG0644|consen  288 SSDDGTCR--IWDARLEP----------------------------------RIYVPRPLK----------FTEKDLVDS  321 (1113)
T ss_pred             CCCCCceE--eccccccc----------------------------------cccCCCCCC----------cccccceee
Confidence            78899999  99987210                                  011000000          001123445


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCC----ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGG----LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      +.|..++..+++++.|+.-..|....-    ...+..........+.+++-.+-.+.+|++.+++....+.+|...++-+
T Consensus       322 ~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvL  401 (1113)
T KOG0644|consen  322 ILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVL  401 (1113)
T ss_pred             eeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeee
Confidence            556666667777777777666655410    0011111111112455666677788899999999988888888855555


Q ss_pred             EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                      .++|-.                -++..+++.||...|||+-.+.+++.+....+.+...+||+||..++....-|.++|.
T Consensus       402 d~Hpfn----------------~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~  465 (1113)
T KOG0644|consen  402 DVHPFN----------------PRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYIL  465 (1113)
T ss_pred             eecCCC----------------cHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEe
Confidence            544432                2345578899999999999988877665445667888999999999988888999998


Q ss_pred             ECCCCee
Q psy10942        482 SIKTSTC  488 (537)
Q Consensus       482 d~~~~~~  488 (537)
                      ....++.
T Consensus       466 g~gqs~s  472 (1113)
T KOG0644|consen  466 GTGQSKS  472 (1113)
T ss_pred             ccCCCcc
Confidence            7655443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=3.9e-16  Score=149.86  Aligned_cols=239  Identities=12%  Similarity=0.037  Sum_probs=159.3

Q ss_pred             CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHH
Q psy10942        117 DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK  196 (537)
Q Consensus       117 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  196 (537)
                      +..|.+||.+.           .. .+.+..|...+.+.+|+ |+++.|+.++.+.. ...|                 +
T Consensus       183 ~~~i~i~d~dg-----------~~-~~~lt~~~~~v~~p~wS-PDG~~la~~s~~~~-~~~i-----------------~  231 (429)
T PRK01742        183 PYEVRVADYDG-----------FN-QFIVNRSSQPLMSPAWS-PDGSKLAYVSFENK-KSQL-----------------V  231 (429)
T ss_pred             eEEEEEECCCC-----------CC-ceEeccCCCccccceEc-CCCCEEEEEEecCC-CcEE-----------------E
Confidence            46899999987           33 45677788889999999 78888877664331 1347                 8


Q ss_pred             HHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCccccccccccc
Q psy10942        197 TFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEA  274 (537)
Q Consensus       197 ~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~  274 (537)
                      +||+       .+++.. +.     ..  .+....+   +|+|||++|+.+. .+|...  +|.                
T Consensus       232 i~dl-------~tg~~~~l~-----~~--~g~~~~~---~wSPDG~~La~~~~~~g~~~--Iy~----------------  276 (429)
T PRK01742        232 VHDL-------RSGARKVVA-----SF--RGHNGAP---AFSPDGSRLAFASSKDGVLN--IYV----------------  276 (429)
T ss_pred             EEeC-------CCCceEEEe-----cC--CCccCce---eECCCCCEEEEEEecCCcEE--EEE----------------
Confidence            8998       766543 33     22  2223467   8999999888654 455554  443                


Q ss_pred             ceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc
Q psy10942        275 EHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGL  353 (537)
Q Consensus       275 ~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~  353 (537)
                                               ||+.++..      ..+..+...+....|+|||+.|+..+ .++...+|++....
T Consensus       277 -------------------------~d~~~~~~------~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~  325 (429)
T PRK01742        277 -------------------------MGANGGTP------SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG  325 (429)
T ss_pred             -------------------------EECCCCCe------EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence                                     33333221      11223445567899999999877655 56778888765221


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                      .....+ .                                +.                  . ....|+|||++|+..+.+
T Consensus       326 ~~~~~l-~--------------------------------~~------------------~-~~~~~SpDG~~ia~~~~~  353 (429)
T PRK01742        326 GGASLV-G--------------------------------GR------------------G-YSAQISADGKTLVMINGD  353 (429)
T ss_pred             CCeEEe-c--------------------------------CC------------------C-CCccCCCCCCEEEEEcCC
Confidence            111111 0                                00                  1 235689999999888775


Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC--CCCeeEEEecCCccceeccCCCCCCccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI--KTSTCVSTFDKHALKIRNSDSENDHKGF  511 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~  511 (537)
                      + +.+||+.+++.......+  ....+.|+|||++|+.++.++...+|++  .+|+.+..+..|.+.+           .
T Consensus       354 ~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~-----------~  419 (429)
T PRK01742        354 N-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQV-----------K  419 (429)
T ss_pred             C-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCC-----------C
Confidence            4 666999887654332222  2356789999999999999998888875  3688888888888888           7


Q ss_pred             cccceeeecC
Q psy10942        512 GLPRQLCSRN  521 (537)
Q Consensus       512 ~~~~~~~s~~  521 (537)
                      .+   +|||-
T Consensus       420 ~p---~wsp~  426 (429)
T PRK01742        420 FP---AWSPY  426 (429)
T ss_pred             Cc---ccCCC
Confidence            77   89884

>KOG1587|consensus

Probab=99.70  E-value=3.4e-16  Score=148.72  Aligned_cols=271  Identities=14%  Similarity=0.110  Sum_probs=185.3

Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      +.+.||++...          ......+. -...|.+++|+|.+.+.++.++.++.    |                 .+
T Consensus       222 ~~~~vW~~~~p----------~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~Gq----V-----------------~l  269 (555)
T KOG1587|consen  222 GVLLVWSLKNP----------NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQ----V-----------------VL  269 (555)
T ss_pred             ceEEEEecCCC----------CCceEEEe-cCCceeEEEeccCCcceEEeeccCce----E-----------------EE
Confidence            46899999883          23333444 34569999999888888888887777    9                 99


Q ss_pred             HHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCC--CeeeeccCCCcceeccccccCCCccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEE--DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP  272 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~  272 (537)
                      ||+       ......   ........|  ..++..+   .|..+.  .-+++++.||.|.  .|+++.-..+.......
T Consensus       270 WD~-------~~~~~~~~s~ls~~~~sh--~~~v~~v---vW~~~~~~~~f~s~ssDG~i~--~W~~~~l~~P~e~~~~~  335 (555)
T KOG1587|consen  270 WDL-------RKGSDTPPSGLSALEVSH--SEPVTAV---VWLQNEHNTEFFSLSSDGSIC--SWDTDMLSLPVEGLLLE  335 (555)
T ss_pred             EEc-------cCCCCCCCcccccccccC--CcCeEEE---EEeccCCCCceEEEecCCcEe--eeeccccccchhhcccc
Confidence            999       444431   000111268  8899999   665443  5599999999999  99888754432221111


Q ss_pred             ccc-------------eeeeeeCCcceEEEEEeCCCeEEEEECCCCceee----eeecccccccCCCeEEEEEcCCCCEE
Q psy10942        273 EAE-------------HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL----NVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       273 ~~~-------------~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      ...             .+.++. .....++.|+.+|.|..-+........    +. ......|.++|.++.++|=+..+
T Consensus       336 ~~~~~~~~~~~~~~~t~~~F~~-~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~-~~~~~~h~g~v~~v~~nPF~~k~  413 (555)
T KOG1587|consen  336 SKKHKGQQSSKAVGATSLKFEP-TDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKG-HSTFITHIGPVYAVSRNPFYPKN  413 (555)
T ss_pred             cccccccccccccceeeEeecc-CCCceEEEEcCCcEEEEEeccCCcccccccccc-cccccccCcceEeeecCCCccce
Confidence            111             011111 111789999999999885544433222    11 33456788999999999977766


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      +..+.|.+++||.......++..+..+.+                                                 .+
T Consensus       414 fls~gDW~vriWs~~~~~~Pl~~~~~~~~-------------------------------------------------~v  444 (555)
T KOG1587|consen  414 FLSVGDWTVRIWSEDVIASPLLSLDSSPD-------------------------------------------------YV  444 (555)
T ss_pred             eeeeccceeEeccccCCCCcchhhhhccc-------------------------------------------------ee
Confidence            66666999999987733333333333332                                                 57


Q ss_pred             eEEEEcCCC-CEEEEEeCCCcEEEEECCC--ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        416 WFVNFSPLD-RILISSSGDATIKLWCLTD--YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       416 ~~~~~s~~~-~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      ++++|||-. ..++++..||.|.+||+..  ..++.+.+.+....+.+.|+++|+.|++|...|.+.+|++..
T Consensus       445 ~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  445 TDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             eeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            778888865 5788888899999999865  445556555666678888999999999999999999999854

>KOG2110|consensus

Probab=99.70  E-value=1.2e-14  Score=124.95  Aligned_cols=215  Identities=16%  Similarity=0.187  Sum_probs=153.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC--CcEEEEEccCCceeeEEEEecC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD--KTVKVWSTTGGLKLLNVLRGHK  363 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~  363 (537)
                      ..|..|+.|| .++|+.......     .........|..+-|+.  .+++..+.+  +.+++++.+ ....+..+....
T Consensus        18 ~~lsvGs~~G-yk~~~~~~~~k~-----~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~K-k~~~ICe~~fpt   88 (391)
T KOG2110|consen   18 TLLSVGSKDG-YKIFSCSPFEKC-----FSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFK-KKTTICEIFFPT   88 (391)
T ss_pred             eEEEccCCCc-eeEEecCchHHh-----hcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcc-cCceEEEEecCC
Confidence            3566666666 467776554321     11112233455666664  355555544  348888888 555554444433


Q ss_pred             -------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCC-cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CC
Q psy10942        364 -------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA-LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GD  433 (537)
Q Consensus       364 -------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d  433 (537)
                             +.+.+++.-.+. |++||+++.+.+.++..-. .+-               ++.++++++.+.++|.-+  ..
T Consensus        89 ~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~---------------gl~AlS~n~~n~ylAyp~s~t~  152 (391)
T KOG2110|consen   89 SILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPK---------------GLCALSPNNANCYLAYPGSTTS  152 (391)
T ss_pred             ceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCcc---------------ceEeeccCCCCceEEecCCCCC
Confidence                   245566655554 9999999999998886541 110               455566666667887643  36


Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc-EEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL-LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG  512 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  512 (537)
                      |.|.+||+.+.+++..+..|.+++.+++|+++|.+|||+++.|+ |||+.+.+|+.+..|+.-...+         ...+
T Consensus       153 GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~---------~IyS  223 (391)
T KOG2110|consen  153 GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPV---------SIYS  223 (391)
T ss_pred             ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceee---------EEEE
Confidence            89999999999999999999999999999999999999999987 7999999999999997644332         1167


Q ss_pred             ccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        513 LPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       513 ~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +   +|+||+++|++.|..++|.||
T Consensus       224 L---~Fs~ds~~L~~sS~TeTVHiF  245 (391)
T KOG2110|consen  224 L---SFSPDSQFLAASSNTETVHIF  245 (391)
T ss_pred             E---EECCCCCeEEEecCCCeEEEE
Confidence            7   999999999999999999885

>KOG0649|consensus

Probab=99.70  E-value=7.7e-15  Score=118.74  Aligned_cols=197  Identities=18%  Similarity=0.230  Sum_probs=137.7

Q ss_pred             CcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        235 KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      +++|.+++|+.|..+|.|.  +..+...                          .+++.       .......     ..
T Consensus        17 a~sp~~~~l~agn~~G~ia--v~sl~sl--------------------------~s~sa-------~~~gk~~-----iv   56 (325)
T KOG0649|consen   17 AISPSKQYLFAGNLFGDIA--VLSLKSL--------------------------DSGSA-------EPPGKLK-----IV   56 (325)
T ss_pred             hhCCcceEEEEecCCCeEE--EEEehhh--------------------------hcccc-------CCCCCcc-----ee
Confidence            7888899999999999888  7776652                          11111       0011111     22


Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc----------------------eeeEEEEecCCCCEEEEEc
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL----------------------KLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----------------------~~~~~~~~~~~~~~l~~~~  372 (537)
                      ...+|.++|..++|.  ..+|++++ ||.|+-|..+...                      ..+..+-..|..+.++.++
T Consensus        57 ~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag  133 (325)
T KOG0649|consen   57 PEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG  133 (325)
T ss_pred             eccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec
Confidence            336899999999998  34666665 5999988755211                      1233344445566777777


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  452 (537)
                      .|+.++.||+++|+..+++++|..                 .+.+++-......+++|++||++++||+++++.+..+..
T Consensus       134 GD~~~y~~dlE~G~i~r~~rGHtD-----------------YvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~  196 (325)
T KOG0649|consen  134 GDGVIYQVDLEDGRIQREYRGHTD-----------------YVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP  196 (325)
T ss_pred             CCeEEEEEEecCCEEEEEEcCCcc-----------------eeeeeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence            999999999999999999999998                 455555544455688999999999999999998887753


Q ss_pred             CC----------cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        453 HD----------ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       453 ~~----------~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      ..          ..|-+++-  +..+|++|+. ..+.+|.++..++...+.-
T Consensus       197 yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLrsse~t~vfpi  245 (325)
T KOG0649|consen  197 YKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLRSSESTCVFPI  245 (325)
T ss_pred             ccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEeccCCCceEEEec
Confidence            22          12444444  4457877654 4699999999888877653

>KOG0303|consensus

Probab=99.69  E-value=1.6e-16  Score=137.28  Aligned_cols=205  Identities=8%  Similarity=0.036  Sum_probs=149.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeee-------c-cccccceeeeEeecCccccccCCcEEEEEeC
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSY-------P-AYESLETCAVFHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      ..|..++|+| .+...|+||++|-+|.||++-.+.+.+.+       . |...+-.+  .+.|-       -.+.|+++|
T Consensus        82 ~~vLDi~w~P-fnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V--~wHPt-------A~NVLlsag  151 (472)
T KOG0303|consen   82 APVLDIDWCP-FNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLV--QWHPT-------APNVLLSAG  151 (472)
T ss_pred             ccccccccCc-cCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEE--eeccc-------chhhHhhcc
Confidence            4677889998 45679999999999999999765544422       2 22333333  56776       567999999


Q ss_pred             ccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh-hh
Q psy10942         75 EKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE-IL  153 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~  153 (537)
                      .|..|.+||+.+|+.+.++.+++.|.++.|+.||.+|++.+.|..|||||..+           ++++..-.+|.+. -.
T Consensus       152 ~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~-----------~~~v~e~~~heG~k~~  220 (472)
T KOG0303|consen  152 SDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR-----------GTVVSEGVAHEGAKPA  220 (472)
T ss_pred             CCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCC-----------CcEeeecccccCCCcc
Confidence            99999999999999999999889999999999999999999999999999999           6777777778763 33


Q ss_pred             hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEec
Q psy10942        154 DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~  233 (537)
                      .+.|. .++. +++..-++...+.+                 .+||.       ...+..+...++...   +.|.--  
T Consensus       221 Raifl-~~g~-i~tTGfsr~seRq~-----------------aLwdp-------~nl~eP~~~~elDtS---nGvl~P--  269 (472)
T KOG0303|consen  221 RAIFL-ASGK-IFTTGFSRMSERQI-----------------ALWDP-------NNLEEPIALQELDTS---NGVLLP--  269 (472)
T ss_pred             eeEEe-ccCc-eeeeccccccccce-----------------eccCc-------ccccCcceeEEeccC---CceEEe--
Confidence            44565 4454 54444444334567                 89988       443333111111133   344444  


Q ss_pred             cCcccCCCeee-eccCCCcceeccccccCC
Q psy10942        234 GKTVKEEDLFP-RQSMEPSTLEELEKRKTY  262 (537)
Q Consensus       234 ~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~  262 (537)
                       -|.+|.+.+. +|-.|+.||  .+.+...
T Consensus       270 -FyD~dt~ivYl~GKGD~~IR--YyEit~d  296 (472)
T KOG0303|consen  270 -FYDPDTSIVYLCGKGDSSIR--YFEITNE  296 (472)
T ss_pred             -eecCCCCEEEEEecCCcceE--EEEecCC
Confidence             4788888776 456689999  9998874

>KOG1334|consensus

Probab=99.69  E-value=1.8e-16  Score=140.63  Aligned_cols=275  Identities=16%  Similarity=0.124  Sum_probs=200.9

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC----------CcceEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG----------GTVELLAS  290 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~l~~  290 (537)
                      +|  .+.|..+   .|+..|..|++++.|..+.  +|+.......        +.-..+|..          .....+++
T Consensus       140 ~H--~GcVntV---~FN~~Gd~l~SgSDD~~vv--~WdW~~~~~~--------l~f~SGH~~NvfQaKFiP~s~d~ti~~  204 (559)
T KOG1334|consen  140 KH--KGCVNTV---HFNQRGDVLASGSDDLQVV--VWDWVSGSPK--------LSFESGHCNNVFQAKFIPFSGDRTIVT  204 (559)
T ss_pred             CC--CCcccee---eecccCceeeccCccceEE--eehhhccCcc--------cccccccccchhhhhccCCCCCcCcee
Confidence            89  9999999   9999999999999999999  9999875322        112222322          22267899


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCce---------------
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLK---------------  354 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~---------------  354 (537)
                      ++.||.+++=.+........  ...+..|.++|..++.-|+. ..|.+++.|+.+.-+|++....               
T Consensus       205 ~s~dgqvr~s~i~~t~~~e~--t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v  282 (559)
T KOG1334|consen  205 SSRDGQVRVSEILETGYVEN--TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERV  282 (559)
T ss_pred             ccccCceeeeeeccccceec--ceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccce
Confidence            99999999887654443222  23456789999999999965 5688999999999999873211               


Q ss_pred             eeEEEEecCC-CCEEEEEcCCCcEEEEECCCCeee------eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942        355 LLNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCV------STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL  427 (537)
Q Consensus       355 ~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  427 (537)
                      .+..+..++. ...+++++.|..+++||.+.-...      .++..+...    .   +.    ...|++++|+.++.-|
T Consensus       283 ~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~----~---d~----~v~ITgl~Ysh~~sEl  351 (559)
T KOG1334|consen  283 GLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLV----E---DD----PVNITGLVYSHDGSEL  351 (559)
T ss_pred             eeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCcccc----c---cC----cccceeEEecCCccce
Confidence            1223333333 347889999999999998754321      222211100    0   00    0179999999888777


Q ss_pred             EEEeCCCcEEEEECCC--c----------eeee-EeecCCcc--eEEEEE-ecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        428 ISSSGDATIKLWCLTD--Y----------VCLK-SLEGHDAS--VLRCHF-INKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       428 ~~~~~dg~i~i~d~~~--~----------~~~~-~~~~~~~~--v~~~~~-s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      ++...|-.|+++.-.-  |          ..+. .+++|.+.  |..+-| -|...|+++|+.-|.|.||+-.+++.++.
T Consensus       352 LaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~  431 (559)
T KOG1334|consen  352 LASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRF  431 (559)
T ss_pred             eeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHH
Confidence            7778888999994321  2          2222 37888654  666665 67888999999999999999999999998


Q ss_pred             ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++-...|           .+|   .-+|--..||+.|.|..|+||
T Consensus       432 MegDr~VV-----------NCL---EpHP~~PvLAsSGid~DVKIW  463 (559)
T KOG1334|consen  432 MEGDRHVV-----------NCL---EPHPHLPVLASSGIDHDVKIW  463 (559)
T ss_pred             hhcccceE-----------ecc---CCCCCCchhhccCCccceeee
Confidence            88876677           777   999999999999999999999

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.68  E-value=6.7e-14  Score=130.52  Aligned_cols=265  Identities=11%  Similarity=0.131  Sum_probs=156.6

Q ss_pred             eeeccCCCcceeccccccCCCccccc--ccc--cccceeeeeeCCcceEEEE-EeCCCeEEEEECCCCceeeeeeccccc
Q psy10942        243 FPRQSMEPSTLEELEKRKTYHFPLFG--IFV--PEAEHGAFYTGGTVELLAS-GSLDKTVKVWSTTGGLKLLNVLRGHKK  317 (537)
Q Consensus       243 l~~~~~d~~i~~~iw~~~~~~~~~~~--~~~--~~~~~~~~~~~~~v~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~  317 (537)
                      +++...++.|.  +|++.... ....  ...  .....+..+.+.  +.+++ +..++.|.+|+++....+..  .... 
T Consensus         5 y~~~~~~~~I~--~~~~~~~g-~l~~~~~~~~~~~~~~l~~spd~--~~lyv~~~~~~~i~~~~~~~~g~l~~--~~~~-   76 (330)
T PRK11028          5 YIASPESQQIH--VWNLNHEG-ALTLLQVVDVPGQVQPMVISPDK--RHLYVGVRPEFRVLSYRIADDGALTF--AAES-   76 (330)
T ss_pred             EEEcCCCCCEE--EEEECCCC-ceeeeeEEecCCCCccEEECCCC--CEEEEEECCCCcEEEEEECCCCceEE--eeee-
Confidence            34456789999  99996421 1111  000  001111111111  34444 45688999999873222111  1111 


Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCc---eee---------EEEEecCCCCEEEE-EcCCCcEEEEECC
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGL---KLL---------NVLRGHKKGTQIVS-TGADGLLKLWSIK  383 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~---~~~---------~~~~~~~~~~~l~~-~~~d~~i~i~d~~  383 (537)
                      ........++++|+++++++++. ++.|.+|++...+   ..+         .....+++++++++ ...++.|.+||+.
T Consensus        77 ~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~  156 (330)
T PRK11028         77 PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLS  156 (330)
T ss_pred             cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEEC
Confidence            12234678999999998888764 7899999986322   111         22234566777754 4556999999998


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCC--c--eeeeEeecCC----
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTD--Y--VCLKSLEGHD----  454 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~--~--~~~~~~~~~~----  454 (537)
                      +...+.......     ... +.+.     ....++|+|++++++++.. ++.|.+|++..  +  +.+..+..+.    
T Consensus       157 ~~g~l~~~~~~~-----~~~-~~g~-----~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~  225 (330)
T PRK11028        157 DDGHLVAQEPAE-----VTT-VEGA-----GPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFS  225 (330)
T ss_pred             CCCcccccCCCc-----eec-CCCC-----CCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCC
Confidence            643221110000     000 0010     4567899999999988876 89999999973  2  3344443221    


Q ss_pred             --cceEEEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC-
Q psy10942        455 --ASVLRCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-  530 (537)
Q Consensus       455 --~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-  530 (537)
                        .....+.++|++++|+++.. ++.|.+|+++.......+.++....        ..+..+   .++|||++|++++. 
T Consensus       226 ~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~--------~~p~~~---~~~~dg~~l~va~~~  294 (330)
T PRK11028        226 DTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE--------TQPRGF---NIDHSGKYLIAAGQK  294 (330)
T ss_pred             CCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc--------ccCCce---EECCCCCEEEEEEcc
Confidence              12346889999999998864 7899999986543222222221100        011567   99999999998875 


Q ss_pred             CCCEEeC
Q psy10942        531 SPQVVVY  537 (537)
Q Consensus       531 dg~i~vW  537 (537)
                      +++|.+|
T Consensus       295 ~~~v~v~  301 (330)
T PRK11028        295 SHHISVY  301 (330)
T ss_pred             CCcEEEE
Confidence            8888886

>KOG1310|consensus

Probab=99.68  E-value=2.7e-15  Score=135.28  Aligned_cols=148  Identities=17%  Similarity=0.189  Sum_probs=110.3

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc--------eEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV--------ELLAS  290 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v--------~~l~~  290 (537)
                      ||  .+.|.|+   .|+.+|.+|++|+.|-.+.  +||.-.....        ...-.+|..  .++        +.+++
T Consensus        48 GH--~GCVN~L---eWn~dG~lL~SGSDD~r~i--vWd~~~~Kll--------hsI~TgHtaNIFsvKFvP~tnnriv~s  112 (758)
T KOG1310|consen   48 GH--TGCVNCL---EWNADGELLASGSDDTRLI--VWDPFEYKLL--------HSISTGHTANIFSVKFVPYTNNRIVLS  112 (758)
T ss_pred             cc--cceecce---eecCCCCEEeecCCcceEE--eecchhccee--------eeeecccccceeEEeeeccCCCeEEEe
Confidence            99  9999999   9999999999999999999  9998753211        112234443  111        78999


Q ss_pred             EeCCCeEEEEECCCCcee-----eeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCce----------
Q psy10942        291 GSLDKTVKVWSTTGGLKL-----LNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLK----------  354 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~----------  354 (537)
                      |..|..|+++|+...+.-     ..........|...|..++-.|++ +.+.+++.||+|+-+|++....          
T Consensus       113 gAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~  192 (758)
T KOG1310|consen  113 GAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSI  192 (758)
T ss_pred             ccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHH
Confidence            999999999999852210     011134456788999999999988 8899999999999999984211          


Q ss_pred             ---------eeEEEEecC-CCCEEEEEcCCCcEEEEECC
Q psy10942        355 ---------LLNVLRGHK-KGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       355 ---------~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~  383 (537)
                               .++.+...+ ...++++|+.|-..++||.+
T Consensus       193 l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  193 LVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             HHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence                     123333333 46789999999999999943

>KOG2394|consensus

Probab=99.68  E-value=9.9e-16  Score=137.68  Aligned_cols=189  Identities=16%  Similarity=0.205  Sum_probs=133.0

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCc-eeeEEEEecCC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGL-KLLNVLRGHKK  364 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~  364 (537)
                      -++.|-.-|.+.+.|....+ ..+++..........|+++.|-|. ...++++-.+|.+++||..... ..-.....+++
T Consensus       187 dllIGf~tGqvq~idp~~~~-~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~  265 (636)
T KOG2394|consen  187 DLLIGFTTGQVQLIDPINFE-VSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKD  265 (636)
T ss_pred             ceEEeeccCceEEecchhhH-HHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCC
Confidence            45566667888888876532 222212222233578999999984 4567777889999999874110 01111222233


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                      +..+.....-+                .....++...++...       .|...+|+|||++||+.+.||.++|||..+.
T Consensus       266 ~~~f~i~t~ks----------------k~~rNPv~~w~~~~g-------~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~  322 (636)
T KOG2394|consen  266 GDQFAILTSKS----------------KKTRNPVARWHIGEG-------SINEFAFSPDGKYLATVSQDGFLRIFDFDTQ  322 (636)
T ss_pred             CCeeEEeeeec----------------cccCCccceeEeccc-------cccceeEcCCCceEEEEecCceEEEeeccHH
Confidence            33222211100                000123333333322       7899999999999999999999999999999


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +++..++..-+...|++|||||+||++|++|-.|.||.+..++.+..-++|..+|
T Consensus       323 eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWV  377 (636)
T KOG2394|consen  323 ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWV  377 (636)
T ss_pred             HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccce
Confidence            8888888888899999999999999999999999999999999999999999998

>KOG1517|consensus

Probab=99.67  E-value=3e-15  Score=145.10  Aligned_cols=290  Identities=16%  Similarity=0.224  Sum_probs=191.7

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc---hhhhhhhhccc-CCCccEEEeeeccc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF---SDEILDIALLG-EEDSHIVVASNEYL  173 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~-~~~~~l~~~~~~~~  173 (537)
                      .-..+.|+|-...++++.....|+|||.+.           .+....+..+   ...|+.+++.- .|...+++++.++.
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~-----------~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGv 1134 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEK-----------GRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGV 1134 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEeccc-----------CceeccccCCCCCCCccceeeeecccchhheeeeccCce
Confidence            466788888888899988778899999998           5555555443   23577887752 34456777777766


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                          |                 +||+-..     ...+.            ..-|+     +|++-...+-....-|.+.
T Consensus      1135 ----I-----------------RIwk~y~-----~~~~~------------~eLVT-----aw~~Ls~~~~~~r~~~~v~ 1171 (1387)
T KOG1517|consen 1135 ----I-----------------RIWKDYA-----DKWKK------------PELVT-----AWSSLSDQLPGARGTGLVV 1171 (1387)
T ss_pred             ----E-----------------EEecccc-----cccCC------------ceeEE-----eeccccccCccCCCCCeee
Confidence                9                 9997611     00000            11111     2333222333333334555


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc-CCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS-PND  332 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~  332 (537)
                        -|.-..                        ..+++++.-..|+|||.........+    ..+....|+++.-+ +.|
T Consensus      1172 --dWqQ~~------------------------G~Ll~tGd~r~IRIWDa~~E~~~~di----P~~s~t~vTaLS~~~~~g 1221 (1387)
T KOG1517|consen 1172 --DWQQQS------------------------GHLLVTGDVRSIRIWDAHKEQVVADI----PYGSSTLVTALSADLVHG 1221 (1387)
T ss_pred             --ehhhhC------------------------CeEEecCCeeEEEEEecccceeEeec----ccCCCccceeecccccCC
Confidence              565544                        25666666889999999887765433    22344556666543 347


Q ss_pred             CEEEEEeCCCcEEEEEccCCce--eeEEEEecCC------------C-CEEEEEcCCCcEEEEECCCCeeeee--eccCC
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLK--LLNVLRGHKK------------G-TQIVSTGADGLLKLWSIKTSTCVST--FDKHA  395 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~------------~-~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~  395 (537)
                      +.+++|..||.+++||.+....  .+...+.|.+            | ..+++++.+|.|++||++.......  +..|.
T Consensus      1222 n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~ 1301 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHW 1301 (1387)
T ss_pred             ceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecc
Confidence            9999999999999999874322  3444444433            3 2599999999999999997522211  11111


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-------CcceEEEEEecCCCE
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-------DASVLRCHFINKGTQ  468 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~  468 (537)
                      ..         |     +..+++..+++...+|+|+. +.|+||++.. +.+..++.+       .+.+.+++|+|..-+
T Consensus      1302 ~y---------G-----s~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~FHP~~~l 1365 (1387)
T KOG1517|consen 1302 EY---------G-----SALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAFHPHRLL 1365 (1387)
T ss_pred             cc---------C-----ccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeeecchhHh
Confidence            00         0     03788999999999999998 9999999864 444444322       346799999999999


Q ss_pred             EEEEeCCCcEEEEECCCCe
Q psy10942        469 IVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       469 l~s~~~dg~v~vwd~~~~~  487 (537)
                      ||+|+.|.+|.||....+.
T Consensus      1366 lAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1366 LAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             hhhccCCceEEEeecCCcC
Confidence            9999999999999876543

>KOG1587|consensus

Probab=99.67  E-value=8.8e-15  Score=139.23  Aligned_cols=260  Identities=18%  Similarity=0.162  Sum_probs=171.3

Q ss_pred             CcceeccccccCCCcccccc-cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee-eeeecccccccCCCeEEEE
Q psy10942        250 PSTLEELEKRKTYHFPLFGI-FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~v~~~~  327 (537)
                      +.+.  +|++.....+.... ...++..+..+.... .+++.|..+|.|.+||+..+... ...+......|..++..+.
T Consensus       222 ~~~~--vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p-~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vv  298 (555)
T KOG1587|consen  222 GVLL--VWSLKNPNTPELVLESPSEVTCLKFCPFDP-NLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVV  298 (555)
T ss_pred             ceEE--EEecCCCCCceEEEecCCceeEEEeccCCc-ceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEE
Confidence            3577  99998863332221 111222222222211 68999999999999999887652 2222444567899999999


Q ss_pred             EcCCCCE--EEEEeCCCcEEEEEccCCceee---------------------EEEEecC-CCCEEEEEcCCCcEEEEECC
Q psy10942        328 VSPNDKL--LASGSLDKTVKVWSTTGGLKLL---------------------NVLRGHK-KGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       328 ~s~~~~~--l~~~~~d~~i~i~d~~~~~~~~---------------------~~~~~~~-~~~~l~~~~~d~~i~i~d~~  383 (537)
                      |..+..-  +++++.||.|..|+++.-..+.                     ..+..++ +...++.|+.+|.|.--+-.
T Consensus       299 W~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~  378 (555)
T KOG1587|consen  299 WLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRK  378 (555)
T ss_pred             EeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEecc
Confidence            9875444  9999999999999887322111                     1122222 25678999999988774333


Q ss_pred             CCeee--eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEEE
Q psy10942        384 TSTCV--STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLRC  460 (537)
Q Consensus       384 ~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~  460 (537)
                      ..+.-  ..++.+.           +..+..+++.++.++|=+..++..+.|.+++||... ...++..+..+...|+++
T Consensus       379 g~~~~~~~~~~~~~-----------~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~v  447 (555)
T KOG1587|consen  379 GYTPAPEVSYKGHS-----------TFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDV  447 (555)
T ss_pred             CCcccccccccccc-----------cccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeee
Confidence            22111  1111111           111122377888888877555555559999999988 778888888888889999


Q ss_pred             EEecCCC-EEEEEeCCCcEEEEECCCC--eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        461 HFINKGT-QIVSTGADGLLKLWSIKTS--TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       461 ~~s~~~~-~l~s~~~dg~v~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|||... .++++..||.+.+||+...  +++.....+....           ..+   .|+++|+.|+.|+..|.+.+|
T Consensus       448 aWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l-----------~~~---~~s~~g~~lavGd~~G~~~~~  513 (555)
T KOG1587|consen  448 AWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPAL-----------TRV---RWSPNGKLLAVGDANGTTHIL  513 (555)
T ss_pred             EEcCcCceEEEEEcCCCceehhhhhccccCCccccccccccc-----------cee---ecCCCCcEEEEecCCCcEEEE
Confidence            9999654 6677788999999999653  3333333332222           444   899999999999999998875

>KOG1523|consensus

Probab=99.65  E-value=8.2e-15  Score=123.47  Aligned_cols=256  Identities=18%  Similarity=0.210  Sum_probs=178.2

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ++|++.+|++|++.+|++.....|.||......        ..+..+++..|...|+.+.|+ +..+.|+.++.++.   
T Consensus        11 ~pitchAwn~drt~iAv~~~~~evhiy~~~~~~--------~w~~~htls~Hd~~vtgvdWa-p~snrIvtcs~drn---   78 (361)
T KOG1523|consen   11 EPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD--------LWEPAHTLSEHDKIVTGVDWA-PKSNRIVTCSHDRN---   78 (361)
T ss_pred             CceeeeeecCCCceEEeccCCceEEEEEecCCC--------CceeceehhhhCcceeEEeec-CCCCceeEccCCCC---
Confidence            689999999999999999999999999988742        146788999999999999999 77788999998888   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecc
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEEL  256 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~i  256 (537)
                       -                 ++|..       ..+..--+...+..+  +..++++   .|+|.++.||+|+..+.|.  +
T Consensus        79 -a-----------------yVw~~-------~~~~~WkptlvLlRi--NrAAt~V---~WsP~enkFAVgSgar~is--V  126 (361)
T KOG1523|consen   79 -A-----------------YVWTQ-------PSGGTWKPTLVLLRI--NRAATCV---KWSPKENKFAVGSGARLIS--V  126 (361)
T ss_pred             -c-----------------ccccc-------CCCCeeccceeEEEe--ccceeeE---eecCcCceEEeccCccEEE--E
Confidence             7                 88987       332221111122278  8999999   9999999999999988888  7


Q ss_pred             ccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE
Q psy10942        257 EKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA  336 (537)
Q Consensus       257 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  336 (537)
                      |-++.+..                                   |=+.         +...+.+.+.|+++.|+|++-+|+
T Consensus       127 cy~E~ENd-----------------------------------WWVs---------KhikkPirStv~sldWhpnnVLla  162 (361)
T KOG1523|consen  127 CYYEQEND-----------------------------------WWVS---------KHIKKPIRSTVTSLDWHPNNVLLA  162 (361)
T ss_pred             EEEecccc-----------------------------------eehh---------hhhCCccccceeeeeccCCcceec
Confidence            76655210                                   1110         122345678899999999999999


Q ss_pred             EEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC--CCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI--KTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       337 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +|+.|+..+++..-     ++.+...+..            --|+-  .-|+.+.++....                 |.
T Consensus       163 aGs~D~k~rVfSay-----IK~Vdekpap------------~pWgsk~PFG~lm~E~~~~g-----------------gw  208 (361)
T KOG1523|consen  163 AGSTDGKCRVFSAY-----IKGVDEKPAP------------TPWGSKMPFGQLMSEASSSG-----------------GW  208 (361)
T ss_pred             ccccCcceeEEEEe-----eeccccCCCC------------CCCccCCcHHHHHHhhccCC-----------------Cc
Confidence            99999999998753     1111111110            00111  1122222221111                 27


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCce-eeeEeecCCcceEEEEEecCCCEEEEEeCC
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYV-CLKSLEGHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                      +..+.|+|+|..|+-.+.|..+.+-|..... .+..+....-+..++.|-.+. .++.++.|
T Consensus       209 vh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~-~vv~ag~~  269 (361)
T KOG1523|consen  209 VHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISEN-SVVAAGYD  269 (361)
T ss_pred             eeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCC-ceeecCCC
Confidence            8999999999999999999999999987654 334443333667777776543 33344444

>KOG2315|consensus

Probab=99.65  E-value=1.1e-13  Score=125.55  Aligned_cols=337  Identities=12%  Similarity=0.136  Sum_probs=207.0

Q ss_pred             EEEEEcCcc-ceeeeecc---ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEE
Q psy10942         28 LFTWDLSSR-KQLRSYPA---YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIV  103 (537)
Q Consensus        28 v~iwd~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~  103 (537)
                      +.+|+.-.. .....++.   .++...+  ++++        ++++++... ++.++|++..++..+.+.... .+.++.
T Consensus        13 ~~l~~~~~~~~~~~~f~~~~~~~~~~v~--~~S~--------~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~-~~~~L~   80 (566)
T KOG2315|consen   13 FYLFNGPGSKDAVTVFEQNKTSRPCNVF--AYSN--------NGRLFAYSD-NQVVKVFEIATLKVVLCVELK-KTYDLL   80 (566)
T ss_pred             eEEeccCCccccccccccCCCCCcceeE--EEcC--------CCcEEEEEc-CCeEEEEEccCCcEEEEeccc-eeeeee
Confidence            777876442 22333333   2232222  4555        777777776 667999999988766565554 899999


Q ss_pred             EeccccEEEEEe-----C-----CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942        104 RSSVKRMYAVVT-----A-----DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       104 ~s~~~~~la~~~-----~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      |||-|.+|.+--     .     .-.+.+|++++           ......+......-.+..|+ .|+.+.+- -...+
T Consensus        81 fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet-----------~~~~s~~q~k~Q~~W~~qfs-~dEsl~ar-lv~ne  147 (566)
T KOG2315|consen   81 FSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVET-----------GVQRSQIQKKMQNGWVPQFS-IDESLAAR-LVSNE  147 (566)
T ss_pred             ecccccccccccccccccCCCCCCCceeeeeecc-----------ceehhheehhhhcCcccccc-cchhhhhh-hhcce
Confidence            999999987632     1     23477999888           33333333222222577888 55443322 22222


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCC--Ceee-----e
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEE--DLFP-----R  245 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~-----~  245 (537)
                          +                 .+|+.       ...+.. -+     -|  ...|..+   .+||.+  ..+|     .
T Consensus       148 ----v-----------------~f~~~-------~~f~~~~~k-----l~--~~~i~~f---~lSpgp~~~~vAvyvPe~  189 (566)
T KOG2315|consen  148 ----V-----------------QFYDL-------GSFKTIQHK-----LS--VSGITML---SLSPGPEPPFVAVYVPEK  189 (566)
T ss_pred             ----E-----------------EEEec-------CCccceeee-----ee--ccceeeE---EecCCCCCceEEEEccCC
Confidence                6                 66776       443333 22     34  6677777   788763  3444     3


Q ss_pred             ccCCCcceeccccccCCCc--cccc--ccccccceeeeeeC-CcceEEEEEeCCC---------eEEEEECCCCceeeee
Q psy10942        246 QSMEPSTLEELEKRKTYHF--PLFG--IFVPEAEHGAFYTG-GTVELLASGSLDK---------TVKVWSTTGGLKLLNV  311 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~--~~~~--~~~~~~~~~~~~~~-~~v~~l~~~~~d~---------~i~i~~~~~~~~~~~~  311 (537)
                      .+.-+.++  +|.......  +..+  .+......+.+... .++-.|++..-|.         ++++.++++.....  
T Consensus       190 kGaPa~vr--i~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V--  265 (566)
T KOG2315|consen  190 KGAPASVR--IYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSV--  265 (566)
T ss_pred             CCCCcEEE--EeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEE--
Confidence            56677889  998873211  1100  11111112222211 3334444444343         67777777443221  


Q ss_pred             ecccccccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        312 LRGHKKGHEKDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       312 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                          .....++|.++.|+|+++.++++.  .-..+.|+|++  ..++.                       |+..+    
T Consensus       266 ----~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr--~~~v~-----------------------df~eg----  312 (566)
T KOG2315|consen  266 ----PLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR--GKPVF-----------------------DFPEG----  312 (566)
T ss_pred             ----ecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC--CCEeE-----------------------eCCCC----
Confidence                123468999999999998777643  45567788877  22221                       21111    


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeeeEeecCCcceEEEEEecCC
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKG  466 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~  466 (537)
                                              +-+++-|+|.|++++.++.+   |.|.+||..+.+++..+....  -+-+.|+|||
T Consensus       313 ------------------------pRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdG  366 (566)
T KOG2315|consen  313 ------------------------PRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDG  366 (566)
T ss_pred             ------------------------CccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCC
Confidence                                    45668899999999887754   899999999999888888543  3558999999


Q ss_pred             CEEEEEeC------CCcEEEEECCCCeeEEE
Q psy10942        467 TQIVSTGA------DGLLKLWSIKTSTCVST  491 (537)
Q Consensus       467 ~~l~s~~~------dg~v~vwd~~~~~~~~~  491 (537)
                      .+++|++.      |+.++||++ +|.++..
T Consensus       367 e~flTATTaPRlrvdNg~Kiwhy-tG~~l~~  396 (566)
T KOG2315|consen  367 EYFLTATTAPRLRVDNGIKIWHY-TGSLLHE  396 (566)
T ss_pred             cEEEEEeccccEEecCCeEEEEe-cCceeeh
Confidence            99998875      788999998 6666543

>KOG1272|consensus

Probab=99.64  E-value=2.7e-16  Score=138.76  Aligned_cols=268  Identities=10%  Similarity=0.067  Sum_probs=203.2

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      |.--.+.|+  .+|..|+.|++.|.|-..|..++++...+...|.+..+  .|+.        +..+++++- +..++||
T Consensus       130 FGPY~~~yt--rnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv--~~LH--------neq~~AVAQ-K~y~yvY  196 (545)
T KOG1272|consen  130 FGPYHLDYT--RNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDV--TFLH--------NEQFFAVAQ-KKYVYVY  196 (545)
T ss_pred             cCCeeeeec--CCccEEEecCCccceeeeecccceeeeeeehhhhhhhh--hhhc--------chHHHHhhh-hceEEEe
Confidence            334457788  89999999999999999999999999999999999999  4455        446777776 6779999


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED  162 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (537)
                      | ..|..+++++.+..|..+.|-|.--+|++++..|.+.--|+.+           ++++..+....+.+..|+-+| -+
T Consensus       197 D-~~GtElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~-----------GklVa~~~t~~G~~~vm~qNP-~N  263 (545)
T KOG1272|consen  197 D-NNGTELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVST-----------GKLVASIRTGAGRTDVMKQNP-YN  263 (545)
T ss_pred             c-CCCcEEeehhhcCchhhhcccchhheeeecccCCceEEEeech-----------hhhhHHHHccCCccchhhcCC-cc
Confidence            9 6689999999999999999999999999999999999999999           788888888888889999885 33


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE  240 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~  240 (537)
                      ..+-++...    |+|                 .+|..       ...+.+  +-     .|  .++|.++   ++.++|
T Consensus       264 aVih~Ghsn----GtV-----------------SlWSP-------~skePLvKiL-----cH--~g~V~si---Av~~~G  305 (545)
T KOG1272|consen  264 AVIHLGHSN----GTV-----------------SLWSP-------NSKEPLVKIL-----CH--RGPVSSI---AVDRGG  305 (545)
T ss_pred             ceEEEcCCC----ceE-----------------EecCC-------CCcchHHHHH-----hc--CCCcceE---EECCCC
Confidence            333333333    458                 99988       777666  55     79  9999999   999999


Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCc--c--eEEEEEeCCCeEEEEECCCC-ceeeeeeccc
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGT--V--ELLASGSLDKTVKVWSTTGG-LKLLNVLRGH  315 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--v--~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~  315 (537)
                      +|+++.+.|..++  |||++...+....        ...|....  +  .-+++.+....+.+|.-... ....   ...
T Consensus       306 ~YMaTtG~Dr~~k--IWDlR~~~ql~t~--------~tp~~a~~ls~SqkglLA~~~G~~v~iw~d~~~~s~~~---~~p  372 (545)
T KOG1272|consen  306 RYMATTGLDRKVK--IWDLRNFYQLHTY--------RTPHPASNLSLSQKGLLALSYGDHVQIWKDALKGSGHG---ETP  372 (545)
T ss_pred             cEEeeccccccee--Eeeecccccccee--------ecCCCccccccccccceeeecCCeeeeehhhhcCCCCC---Ccc
Confidence            9999999999999  9999984322111        11122211  1  44556666678999953221 1000   111


Q ss_pred             cccc--CCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        316 KKGH--EKDINCVTVSPNDKLLASGSLDKTVKVW  347 (537)
Q Consensus       316 ~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~i~  347 (537)
                      +-.|  .++|..+.|.|-...|-+|...|.-.+.
T Consensus       373 Ym~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsil  406 (545)
T KOG1272|consen  373 YMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSIL  406 (545)
T ss_pred             hhhhccCcccccceeccHHHeeeccccCCceeEe
Confidence            1222  3589999999988888888776654443

>KOG2111|consensus

Probab=99.64  E-value=2.4e-13  Score=114.78  Aligned_cols=227  Identities=13%  Similarity=0.214  Sum_probs=154.1

Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC-cc-------eEEE-EEeCC--
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG-TV-------ELLA-SGSLD--  294 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v-------~~l~-~~~~d--  294 (537)
                      ....++   +|+.|..-++.+..+| .+  +++.+.-.....         ...+..+ .+       ++++ +|+.+  
T Consensus         6 ~~~lsv---s~NQD~ScFava~~~G-fr--iyn~~P~ke~~~---------r~~~~~G~~~veMLfR~N~laLVGGg~~p   70 (346)
T KOG2111|consen    6 PKTLSV---SFNQDHSCFAVATDTG-FR--IYNCDPFKESAS---------RQFIDGGFKIVEMLFRSNYLALVGGGSRP   70 (346)
T ss_pred             CceeEE---EEccCCceEEEEecCc-eE--EEecCchhhhhh---------hccccCchhhhhHhhhhceEEEecCCCCC
Confidence            345567   8999999998888776 56  888776221111         1111111 00       3333 33333  


Q ss_pred             ----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEE
Q psy10942        295 ----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVS  370 (537)
Q Consensus       295 ----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~  370 (537)
                          +.+.|||-........+      ....+|.++.+.++  .+++. ..+.|++|......+.+..+....+.+    
T Consensus        71 ky~pNkviIWDD~k~~~i~el------~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPk----  137 (346)
T KOG2111|consen   71 KYPPNKVIIWDDLKERCIIEL------SFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPK----  137 (346)
T ss_pred             CCCCceEEEEecccCcEEEEE------EeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCC----
Confidence                57999995554443222      45678999999875  44444 357899999986666666655433211    


Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEEECCCcee--e
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLWCLTDYVC--L  447 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~--~  447 (537)
                                                                 +..+++-..+..+||.- -.-|.|+|-|+...+.  .
T Consensus       138 -------------------------------------------GlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p  174 (346)
T KOG2111|consen  138 -------------------------------------------GLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAP  174 (346)
T ss_pred             -------------------------------------------ceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCc
Confidence                                                       11111111122344433 3458999999987554  4


Q ss_pred             eEeecCCcceEEEEEecCCCEEEEEeCCCc-EEEEECCCCeeEEEecCCc--cceeccCCCCCCccccccceeeecCCCE
Q psy10942        448 KSLEGHDASVLRCHFINKGTQIVSTGADGL-LKLWSIKTSTCVSTFDKHA--LKIRNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       448 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      ..+.+|.+.|.+++.+.+|.++||+|..|+ |||||..+|++++.++.-.  ..|           .++   +|||++.+
T Consensus       175 ~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~i-----------y~i---aFSp~~s~  240 (346)
T KOG2111|consen  175 SIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADI-----------YCI---AFSPNSSW  240 (346)
T ss_pred             eEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheE-----------EEE---EeCCCccE
Confidence            778899999999999999999999999987 8999999999999987433  345           777   99999999


Q ss_pred             EEEEeCCCCEEeC
Q psy10942        525 EYRGGWSPQVVVY  537 (537)
Q Consensus       525 l~s~~~dg~i~vW  537 (537)
                      ||++|+-|+|.||
T Consensus       241 LavsSdKgTlHiF  253 (346)
T KOG2111|consen  241 LAVSSDKGTLHIF  253 (346)
T ss_pred             EEEEcCCCeEEEE
Confidence            9999999999885

>KOG3881|consensus

Probab=99.64  E-value=1.4e-14  Score=125.42  Aligned_cols=259  Identities=11%  Similarity=0.077  Sum_probs=175.5

Q ss_pred             cceEEEEEecccc--EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         97 SPLVRIVRSSVKR--MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~~~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      ..|.+++|.-|++  .|...+.+..+..+++......     ...............|..++..   +..|++|..++. 
T Consensus        56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~-----s~~~~~~~~~l~~~~I~gl~~~---dg~Litc~~sG~-  126 (412)
T KOG3881|consen   56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEIS-----SSLDDAKTVSLGTKSIKGLKLA---DGTLITCVSSGN-  126 (412)
T ss_pred             hhhhhheeecCCceeEeeccccCcccccccccCCccc-----cccccccccccccccccchhhc---CCEEEEEecCCc-
Confidence            5899999976665  3555546667777776652110     0011122445556678888876   567778877777 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-----cc-ccccccccCCCcCeEEEEeccCcccCC-Ceeeecc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-----QQ-KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQS  247 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-----~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~  247 (537)
                         +                 .+|..       +.+.     .. +.     .+   ..+..+   .-++.. ..+++|+
T Consensus       127 ---l-----------------~~~~~-------k~~d~hss~l~~la-----~g---~g~~~~---r~~~~~p~Iva~GG  168 (412)
T KOG3881|consen  127 ---L-----------------QVRHD-------KSGDLHSSKLIKLA-----TG---PGLYDV---RQTDTDPYIVATGG  168 (412)
T ss_pred             ---E-----------------EEEec-------cCCccccccceeee-----cC---Cceeee---ccCCCCCceEecCc
Confidence               8                 88877       4221     22 22     22   334444   334433 3444566


Q ss_pred             CC--CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        248 ME--PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       248 ~d--~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      ..  ..+.  +|++...                                  ..+|....-..-.     .--.-.-.+++
T Consensus       169 ke~~n~lk--iwdle~~----------------------------------~qiw~aKNvpnD~-----L~LrVPvW~td  207 (412)
T KOG3881|consen  169 KENINELK--IWDLEQS----------------------------------KQIWSAKNVPNDR-----LGLRVPVWITD  207 (412)
T ss_pred             hhccccee--eeecccc----------------------------------eeeeeccCCCCcc-----ccceeeeeecc
Confidence            66  5566  7776652                                  2344333221100     00011234567


Q ss_pred             EEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        326 VTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       326 ~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      +.|-|.  ...|++++.-+.+++||.+.+.+++..+.....                                       
T Consensus       208 i~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~---------------------------------------  248 (412)
T KOG3881|consen  208 IRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN---------------------------------------  248 (412)
T ss_pred             ceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccC---------------------------------------
Confidence            778776  778889888889999998866666666655433                                       


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-eecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                                +++++...|+++++++|..-|.+..||++.++.+.. +++..+.|+++..+|.+++|++++-|..|||+|
T Consensus       249 ----------~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD  318 (412)
T KOG3881|consen  249 ----------PISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHD  318 (412)
T ss_pred             ----------cceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEee
Confidence                      888999999999999999999999999999998877 888999999999999999999999999999999


Q ss_pred             CCCCeeEEEe
Q psy10942        483 IKTSTCVSTF  492 (537)
Q Consensus       483 ~~~~~~~~~~  492 (537)
                      +++.+++...
T Consensus       319 ~ktrkll~kv  328 (412)
T KOG3881|consen  319 IKTRKLLHKV  328 (412)
T ss_pred             cccchhhhhh
Confidence            9997766543

>KOG1334|consensus

Probab=99.63  E-value=2.4e-15  Score=133.61  Aligned_cols=299  Identities=13%  Similarity=0.108  Sum_probs=206.2

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      +-||+.+.|.  ..|..|++++.|..|.+||..+++.+..+.  +...+-..  -|+|..      +.+.+++.+.||.+
T Consensus       142 ~GcVntV~FN--~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQa--KFiP~s------~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  142 KGCVNTVHFN--QRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQA--KFIPFS------GDRTIVTSSRDGQV  211 (559)
T ss_pred             CCccceeeec--ccCceeeccCccceEEeehhhccCcccccccccccchhhh--hccCCC------CCcCceeccccCce
Confidence            3589999999  999999999999999999999999988887  33444444  456643      55789999999999


Q ss_pred             Eeeeccceeh----hhhcCCCcceEEEEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchh---h
Q psy10942         80 HYYETSAVKE----LYQHGLSSPLVRIVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD---E  151 (537)
Q Consensus        80 ~~wd~~~~~~----~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~  151 (537)
                      ++=.+.....    ....++.+.|..++.-|+..+ |.+++.|+.+.-+|+..+.+.        .....-+.+..   .
T Consensus       212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa--------~~~~cr~~~~~~~v~  283 (559)
T KOG1334|consen  212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPA--------EKFVCREADEKERVG  283 (559)
T ss_pred             eeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcc--------ceeeeeccCCcccee
Confidence            9987654322    223345579999999888765 889999999999999874332        11112222222   3


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTL  230 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~  230 (537)
                      ...++..|.+...++++..+.-    +                 ++||...-.+...++... +....+.. +..-.|++
T Consensus       284 L~~Ia~~P~nt~~faVgG~dqf----~-----------------RvYD~R~~~~e~~n~~~~~f~p~hl~~-d~~v~ITg  341 (559)
T KOG1334|consen  284 LYTIAVDPRNTNEFAVGGSDQF----A-----------------RVYDQRRIDKEENNGVLDKFCPHHLVE-DDPVNITG  341 (559)
T ss_pred             eeeEecCCCCccccccCChhhh----h-----------------hhhcccchhhccccchhhhcCCccccc-cCccccee
Confidence            5778888777778888777776    7                 888871111111111000 11000101 11567899


Q ss_pred             EeccCcccCCCeeeeccCCCcceeccccccCCCccccccc----ccccceeeeeeC-Ccc----------eEEEEEeCCC
Q psy10942        231 LERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF----VPEAEHGAFYTG-GTV----------ELLASGSLDK  295 (537)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~----~~~~~~~~~~~~-~~v----------~~l~~~~~d~  295 (537)
                      +   +|+.++.-|++...|-.|.  +++...+.+......    ......+.+|.. ..|          .++++|+.-|
T Consensus       342 l---~Ysh~~sElLaSYnDe~IY--LF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCG  416 (559)
T KOG1334|consen  342 L---VYSHDGSELLASYNDEDIY--LFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCG  416 (559)
T ss_pred             E---EecCCccceeeeecccceE--EeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccc
Confidence            9   9998887777777888888  886554433111100    111223667766 222          7899999999


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      .|.+|+-.+++.     ...+.+-..-|+|+.-+|--..||+.+-|..|+||...
T Consensus       417 hIFiW~K~t~ei-----i~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~  466 (559)
T KOG1334|consen  417 HIFIWDKKTGEI-----IRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPL  466 (559)
T ss_pred             eEEEEecchhHH-----HHHhhcccceEeccCCCCCCchhhccCCccceeeecCC
Confidence            999999999876     44455555589999999999999999999999999874

>KOG0771|consensus

Probab=99.63  E-value=7.5e-15  Score=128.50  Aligned_cols=175  Identities=19%  Similarity=0.232  Sum_probs=130.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-----
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-----  360 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----  360 (537)
                      ..+++++.||++|+|+..+...     ......|...|.++.|+|||++|++.+.| ..++|+.+. +..+....     
T Consensus       157 s~latgg~dg~lRv~~~Ps~~t-----~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~-g~~~a~~t~~~k~  229 (398)
T KOG0771|consen  157 SKLATGGTDGTLRVWEWPSMLT-----ILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNT-GAALARKTPFSKD  229 (398)
T ss_pred             CEeeeccccceEEEEecCcchh-----hhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEecc-CchhhhcCCcccc
Confidence            4799999999999999776654     34456788999999999999999999999 899999984 33333322     


Q ss_pred             -------ecCCC---C-EEEE-EcCCCcEEEEECCCCee------eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC
Q psy10942        361 -------GHKKG---T-QIVS-TGADGLLKLWSIKTSTC------VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP  422 (537)
Q Consensus       361 -------~~~~~---~-~l~~-~~~d~~i~i~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~  422 (537)
                             ...++   . ++++ ....+.|+.||+.....      .+....+.                  .|++++.|+
T Consensus       230 ~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~------------------siSsl~VS~  291 (398)
T KOG0771|consen  230 EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFK------------------SISSLAVSD  291 (398)
T ss_pred             hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccC------------------cceeEEEcC
Confidence                   11111   1 2222 22345566655543221      11111111                  789999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCceeeeEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        423 LDRILISSSGDATIKLWCLTDYVCLKSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      ||+++|.|+.||.|.|++..+.+.++.. +.|...|+.+.|+||.+++++.+.|....|..+.-
T Consensus       292 dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  292 DGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             CCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            9999999999999999999988777655 46999999999999999999999999998887754

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=2.2e-14  Score=137.39  Aligned_cols=238  Identities=11%  Similarity=-0.006  Sum_probs=148.2

Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      ..|.++|.+.           .. .+.+..+...+.+.+|+ |+++.|+..+.... ...+                 .+
T Consensus       179 ~~l~~~d~dg-----------~~-~~~lt~~~~~~~~p~wS-PDG~~la~~s~~~g-~~~i-----------------~i  227 (429)
T PRK03629        179 YELRVSDYDG-----------YN-QFVVHRSPQPLMSPAWS-PDGSKLAYVTFESG-RSAL-----------------VI  227 (429)
T ss_pred             eeEEEEcCCC-----------CC-CEEeecCCCceeeeEEc-CCCCEEEEEEecCC-CcEE-----------------EE
Confidence            3688899887           23 23455566678999999 78888876653221 1336                 77


Q ss_pred             HHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      |++       .+++.. +.     ..  .+.+...   .|+|||+.|+.. +.++.                        
T Consensus       228 ~dl-------~~G~~~~l~-----~~--~~~~~~~---~~SPDG~~La~~~~~~g~------------------------  266 (429)
T PRK03629        228 QTL-------ANGAVRQVA-----SF--PRHNGAP---AFSPDGSKLAFALSKTGS------------------------  266 (429)
T ss_pred             EEC-------CCCCeEEcc-----CC--CCCcCCe---EECCCCCEEEEEEcCCCC------------------------
Confidence            787       666544 33     23  3334567   899999988754 22222                        


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-CcEEEE--EccCC
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-KTVKVW--STTGG  352 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~i~i~--d~~~~  352 (537)
                                         ..|++||+++++..      .+..+...+....|+|||+.|+..+.+ +...+|  |+. +
T Consensus       267 -------------------~~I~~~d~~tg~~~------~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~-~  320 (429)
T PRK03629        267 -------------------LNLYVMDLASGQIR------QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN-G  320 (429)
T ss_pred             -------------------cEEEEEECCCCCEE------EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECC-C
Confidence                               13555565554321      112223456788999999988877653 333444  333 1


Q ss_pred             ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      .. ...+...                                ..                 ......|+|||++|+..+.
T Consensus       321 g~-~~~lt~~--------------------------------~~-----------------~~~~~~~SpDG~~Ia~~~~  350 (429)
T PRK03629        321 GA-PQRITWE--------------------------------GS-----------------QNQDADVSSDGKFMVMVSS  350 (429)
T ss_pred             CC-eEEeecC--------------------------------CC-----------------CccCEEECCCCCEEEEEEc
Confidence            11 1111100                                00                 2345678999998887654


Q ss_pred             C---CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc---EEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942        433 D---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL---LKLWSIKTSTCVSTFDKHALKIRNSDSEN  506 (537)
Q Consensus       433 d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~---v~vwd~~~~~~~~~~~~~~~~i~~~~~~~  506 (537)
                      +   ..|.+||+.+++.. .+... .......|+|||++|+.++.++.   +.++++ +|+....+.+|.+.+       
T Consensus       351 ~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~-------  420 (429)
T PRK03629        351 NGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQV-------  420 (429)
T ss_pred             cCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCc-------
Confidence            3   35888999887643 33321 22356789999999999988764   677787 566677788888877       


Q ss_pred             CCccccccceeeec
Q psy10942        507 DHKGFGLPRQLCSR  520 (537)
Q Consensus       507 ~~~~~~~~~~~~s~  520 (537)
                          ...   +|+|
T Consensus       421 ----~~p---~Wsp  427 (429)
T PRK03629        421 ----KFP---AWSP  427 (429)
T ss_pred             ----CCc---ccCC
Confidence                777   8887

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=4.8e-14  Score=135.48  Aligned_cols=200  Identities=14%  Similarity=0.079  Sum_probs=134.8

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCc-eeeE-------EEEec
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGL-KLLN-------VLRGH  362 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~-~~~~-------~~~~~  362 (537)
                      +..|++||.+....      ..+..|...+..++|+|||+.|+..+.+   ..|++||+..+. +.+.       ....+
T Consensus       183 ~~~i~i~d~dg~~~------~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wS  256 (429)
T PRK01742        183 PYEVRVADYDGFNQ------FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFS  256 (429)
T ss_pred             eEEEEEECCCCCCc------eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeEC
Confidence            46899999877652      2345677789999999999999887654   369999997432 1222       23445


Q ss_pred             CCCCEEEEEc-CCCcEEEE--ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEE
Q psy10942        363 KKGTQIVSTG-ADGLLKLW--SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKL  438 (537)
Q Consensus       363 ~~~~~l~~~~-~d~~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i  438 (537)
                      ++++.++.+. .+|.+.+|  |+.+++. ..+..+..                 .+...+|+|||+.|+..+ .++..+|
T Consensus       257 PDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~-----------------~~~~~~wSpDG~~i~f~s~~~g~~~I  318 (429)
T PRK01742        257 PDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAG-----------------NNTEPSWSPDGQSILFTSDRSGSPQV  318 (429)
T ss_pred             CCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCC-----------------CcCCEEECCCCCEEEEEECCCCCceE
Confidence            6788777654 67766555  6655543 22322222                 456688999998777655 5678888


Q ss_pred             EECCCc-eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccccee
Q psy10942        439 WCLTDY-VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQL  517 (537)
Q Consensus       439 ~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  517 (537)
                      |++... .....+ .+..  ....|+|||++|+..+.++ +.+||+.+++.......+  ..           ..+   +
T Consensus       319 ~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~-----------~~~---~  378 (429)
T PRK01742        319 YRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LD-----------ESP---S  378 (429)
T ss_pred             EEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CC-----------CCc---e
Confidence            876432 222223 3433  4578999999999888765 666999888754332222  23           456   9


Q ss_pred             eecCCCEEEEEeCCCCEEeC
Q psy10942        518 CSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       518 ~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+|||++|+.++.++...+|
T Consensus       379 ~sPdG~~i~~~s~~g~~~~l  398 (429)
T PRK01742        379 ISPNGIMIIYSSTQGLGKVL  398 (429)
T ss_pred             ECCCCCEEEEEEcCCCceEE
Confidence            99999999999988887765

>KOG0974|consensus

Probab=99.63  E-value=9.3e-13  Score=128.30  Aligned_cols=191  Identities=12%  Similarity=0.090  Sum_probs=145.5

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH   93 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~   93 (537)
                      .+.+.++.+..+..+.+||.+.+.....+...+...-...+..-     .+.+.-++++++.-+.|.+|++...+.-..+
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g-----~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l  171 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIG-----DSAEELYIASGSVFGEIIVWKPHEDNKPIRL  171 (967)
T ss_pred             hhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEe-----ccCcEEEEEeccccccEEEEeccccCCccee
Confidence            45667788877888999999999888887766554322111111     1127789999999999999998743333334


Q ss_pred             C-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee-EEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         94 G-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR-KQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        94 ~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      . +.+.|.++.++.||.++++++.|.++|+|++++.           +.. ...-+|+..|..++|. ++  .+++++.+
T Consensus       172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~-----------~~~~~~~fgHsaRvw~~~~~-~n--~i~t~ged  237 (967)
T KOG0974|consen  172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSR-----------EVLGCTGFGHSARVWACCFL-PN--RIITVGED  237 (967)
T ss_pred             cccCCceEEEEEccCCcEEEEEecCcceeeeecccc-----------cccCcccccccceeEEEEec-cc--eeEEeccc
Confidence            4 4479999999999999999999999999999993           433 3777899999999999 33  78888777


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP  250 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~  250 (537)
                      -.    .                 ++|+.       +..+.. +.     +|. .+.+..+   +..++...+++++.|+
T Consensus       238 ct----c-----------------rvW~~-------~~~~l~~y~-----~h~-g~~iw~~---~~~~~~~~~vT~g~Ds  280 (967)
T KOG0974|consen  238 CT----C-----------------RVWGV-------NGTQLEVYD-----EHS-GKGIWKI---AVPIGVIIKVTGGNDS  280 (967)
T ss_pred             eE----E-----------------EEEec-------ccceehhhh-----hhh-hcceeEE---EEcCCceEEEeeccCc
Confidence            76    8                 88976       444433 44     552 4568888   8899999999999999


Q ss_pred             cceeccccccCC
Q psy10942        251 STLEELEKRKTY  262 (537)
Q Consensus       251 ~i~~~iw~~~~~  262 (537)
                      .++  +|++...
T Consensus       281 ~lk--~~~l~~r  290 (967)
T KOG0974|consen  281 TLK--LWDLNGR  290 (967)
T ss_pred             chh--hhhhhcc
Confidence            999  9998653

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.62  E-value=1.3e-13  Score=127.82  Aligned_cols=325  Identities=14%  Similarity=0.087  Sum_probs=182.0

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcce-EEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPL-VRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      .++++-..++.|.+.|..+.+.+.++.....+ ..+.|+|||+++++++.|+.|.++|+.+           .+.+++++
T Consensus         7 l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~-----------~~~v~~i~   75 (369)
T PF02239_consen    7 LFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT-----------GKVVATIK   75 (369)
T ss_dssp             EEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS-----------SSEEEEEE
T ss_pred             EEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc-----------ccEEEEEe
Confidence            45566677899999999999999999866554 4577999999999999999999999999           78888887


Q ss_pred             cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc--cC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL--GR  222 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~--~h  222 (537)
                      .... ..+++++ +++++++++....   +.+                 .++|.       ++.+..  +......  ..
T Consensus        76 ~G~~-~~~i~~s-~DG~~~~v~n~~~---~~v-----------------~v~D~-------~tle~v~~I~~~~~~~~~~  126 (369)
T PF02239_consen   76 VGGN-PRGIAVS-PDGKYVYVANYEP---GTV-----------------SVIDA-------ETLEPVKTIPTGGMPVDGP  126 (369)
T ss_dssp             -SSE-EEEEEE---TTTEEEEEEEET---TEE-----------------EEEET-------TT--EEEEEE--EE-TTTS
T ss_pred             cCCC-cceEEEc-CCCCEEEEEecCC---Cce-----------------eEecc-------ccccceeeccccccccccc
Confidence            6554 6789999 7888887665432   237                 77777       555444  2200000  11


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...+.++   ..+|....++..-.|                                            .+.|.+.|.
T Consensus       127 --~~Rv~aI---v~s~~~~~fVv~lkd--------------------------------------------~~~I~vVdy  157 (369)
T PF02239_consen  127 --ESRVAAI---VASPGRPEFVVNLKD--------------------------------------------TGEIWVVDY  157 (369)
T ss_dssp             -----EEEE---EE-SSSSEEEEEETT--------------------------------------------TTEEEEEET
T ss_pred             --CCCceeE---EecCCCCEEEEEEcc--------------------------------------------CCeEEEEEe
Confidence              3345555   445554433322222                                            234444444


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                      .....+..    .............|+|++++++++ ..++.|-++|.. ..+.+..+..-..                 
T Consensus       158 ~d~~~~~~----~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~-~~k~v~~i~~g~~-----------------  215 (369)
T PF02239_consen  158 SDPKNLKV----TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK-TGKLVALIDTGKK-----------------  215 (369)
T ss_dssp             TTSSCEEE----EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT-TTEEEEEEE-SSS-----------------
T ss_pred             ccccccce----eeecccccccccccCcccceeeecccccceeEEEeec-cceEEEEeecccc-----------------
Confidence            43322110    011122345678999999987765 456678888888 5554443332111                 


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEE
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  461 (537)
                                 .|..+...+ .+|..     |.++...  ..+...++.-....+.+||..+++.+.++.....+ .-+.
T Consensus       216 -----------p~~~~~~~~-php~~-----g~vw~~~--~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~  275 (369)
T PF02239_consen  216 -----------PHPGPGANF-PHPGF-----GPVWATS--GLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIK  275 (369)
T ss_dssp             -----------BEETTEEEE-EETTT-----EEEEEEE--BSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE
T ss_pred             -----------ccccccccc-cCCCc-----ceEEeec--cccceecccccCCccccchhhcCeEEEEEECCCCc-ceee
Confidence                       011111111 01110     0111111  12222322223346778999999999999987666 7788


Q ss_pred             EecCCCEEEEE----eCCCcEEEEECCCCeeEEEecCCcc-ceeccCCCCCCccccccceeeecCCCEEEEEeCCC--CE
Q psy10942        462 FINKGTQIVST----GADGLLKLWSIKTSTCVSTFDKHAL-KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP--QV  534 (537)
Q Consensus       462 ~s~~~~~l~s~----~~dg~v~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg--~i  534 (537)
                      -+|+++++.+.    ...+.|.++|.++.+.+..+....+ .+           ..+   .|++||+.+..+..++  .|
T Consensus       276 thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~-----------~h~---ef~~dG~~v~vS~~~~~~~i  341 (369)
T PF02239_consen  276 THPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRV-----------VHM---EFNPDGKEVWVSVWDGNGAI  341 (369)
T ss_dssp             --TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--E-----------EEE---EE-TTSSEEEEEEE--TTEE
T ss_pred             cCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcE-----------ecc---EECCCCCEEEEEEecCCCEE
Confidence            89999999988    4458899999999988877753332 34           566   9999999887665544  46


Q ss_pred             EeC
Q psy10942        535 VVY  537 (537)
Q Consensus       535 ~vW  537 (537)
                      .||
T Consensus       342 ~v~  344 (369)
T PF02239_consen  342 VVY  344 (369)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

...

>KOG2111|consensus

Probab=99.62  E-value=2.7e-13  Score=114.46  Aligned_cols=237  Identities=14%  Similarity=0.160  Sum_probs=162.6

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeee---ccccccceeeeEeecCccccccCCcEEEEEeCcc-----
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSY---PAYESLETCAVFHLSDETESKSGGKTFVLAGGEK-----   76 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   76 (537)
                      ...++|.  .|...++.|.++| .+||+++-.++...-   .....+..+  ++..        + -+.++||.+     
T Consensus         8 ~lsvs~N--QD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veM--LfR~--------N-~laLVGGg~~pky~   73 (346)
T KOG2111|consen    8 TLSVSFN--QDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEM--LFRS--------N-YLALVGGGSRPKYP   73 (346)
T ss_pred             eeEEEEc--cCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhH--hhhh--------c-eEEEecCCCCCCCC
Confidence            3457777  8999999999999 999998765443311   122223333  3333        2 233344433     


Q ss_pred             -ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         77 -SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        77 -~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                       ..|.|||=...+++.++....+|.++.++++.  |++.-. +.|.||...+.          .+.++.+....++=--+
T Consensus        74 pNkviIWDD~k~~~i~el~f~~~I~~V~l~r~r--iVvvl~-~~I~VytF~~n----------~k~l~~~et~~NPkGlC  140 (346)
T KOG2111|consen   74 PNKVIIWDDLKERCIIELSFNSEIKAVKLRRDR--IVVVLE-NKIYVYTFPDN----------PKLLHVIETRSNPKGLC  140 (346)
T ss_pred             CceEEEEecccCcEEEEEEeccceeeEEEcCCe--EEEEec-CeEEEEEcCCC----------hhheeeeecccCCCceE
Confidence             46999998888889999988999999999875  555444 78999999864          55666665544322233


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc---c-ccccccccCCCcCeEEEE
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ---Q-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~---~-l~~~~~~~h~~~~~v~~~  231 (537)
                      +..|..+..+++.-+...  |.|                 ++-|+       ...+.   . +.     +|  ...|.|+
T Consensus       141 ~~~~~~~k~~LafPg~k~--Gqv-----------------Qi~dL-------~~~~~~~p~~I~-----AH--~s~Iacv  187 (346)
T KOG2111|consen  141 SLCPTSNKSLLAFPGFKT--GQV-----------------QIVDL-------ASTKPNAPSIIN-----AH--DSDIACV  187 (346)
T ss_pred             eecCCCCceEEEcCCCcc--ceE-----------------EEEEh-------hhcCcCCceEEE-----cc--cCceeEE
Confidence            344444555555555444  778                 77777       33333   2 66     99  9999999


Q ss_pred             eccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeee
Q psy10942        232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNV  311 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~  311 (537)
                         +.+.+|..+|+++..|++                                            |||||..++..+.++
T Consensus       188 ---~Ln~~Gt~vATaStkGTL--------------------------------------------IRIFdt~~g~~l~E~  220 (346)
T KOG2111|consen  188 ---ALNLQGTLVATASTKGTL--------------------------------------------IRIFDTEDGTLLQEL  220 (346)
T ss_pred             ---EEcCCccEEEEeccCcEE--------------------------------------------EEEEEcCCCcEeeee
Confidence               999999999999988875                                            355555555544332


Q ss_pred             ecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy10942        312 LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG  351 (537)
Q Consensus       312 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~  351 (537)
                      -..   .....|.+|+|||++.+|++++.-|+++|+.++.
T Consensus       221 RRG---~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  221 RRG---VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             ecC---CchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            111   1245699999999999999999999999999984

>KOG0771|consensus

Probab=99.62  E-value=1.8e-14  Score=126.16  Aligned_cols=183  Identities=19%  Similarity=0.202  Sum_probs=137.9

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccC---------CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTG---------GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                      ..++|+++|..+++++.||++|+|+...         ....+..+...++++.+++.+.| ..++|+..++..+......
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            7899999999999999999999999542         23456778888999999999999 9999999999666555422


Q ss_pred             CcceEEEEEecCCCceEEeeeeEEEEcCCC-----CEEEEEeCCCcEEEEECCCcee-----eeEeecCCcceEEEEEec
Q psy10942        395 ALKIWTLAITKDENQIITGGVWFVNFSPLD-----RILISSSGDATIKLWCLTDYVC-----LKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-----~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~v~~~~~s~  464 (537)
                      ....               ....+.|+.|+     ..++.-..-+.|..|++..+..     ..+.......|.+++.++
T Consensus       227 ~k~~---------------~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~  291 (398)
T KOG0771|consen  227 SKDE---------------MFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSD  291 (398)
T ss_pred             ccch---------------hhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcC
Confidence            2110               34455666655     2333333446677776654322     111122235699999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEe-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +|+++|.|+.||.|-|++..+-+.++.. +.|...|           +.+   .|+||.+++++.+.|..+.|
T Consensus       292 dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~V-----------T~l---tF~Pdsr~~~svSs~~~~~v  350 (398)
T KOG0771|consen  292 DGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFV-----------TGL---TFSPDSRYLASVSSDNEAAV  350 (398)
T ss_pred             CCcEEEEeccCCcEEEEEeceeeeeEeehhhheeee-----------eeE---EEcCCcCcccccccCCceeE
Confidence            9999999999999999999888877665 4688889           999   99999999999888877654

>KOG2394|consensus

Probab=99.62  E-value=1.4e-14  Score=130.43  Aligned_cols=252  Identities=17%  Similarity=0.183  Sum_probs=150.1

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeE-Eeecchhhhhhhhcc----cCCCccEEEeeecc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK-QFVGFSDEILDIALL----GEEDSHIVVASNEY  172 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~----~~~~~~l~~~~~~~  172 (537)
                      .++...++-.|++|+..-. ..+.+|+...+....      ..+.+ .+.+.  ...|-.|+    .+.+--++++-..+
T Consensus       125 ~~~~~~~~~~gd~lcFnvg-~~lyv~~~~g~~~~~------~pi~k~~y~gt--~P~cHdfn~~~a~~~g~dllIGf~tG  195 (636)
T KOG2394|consen  125 IVTNTNQSGKGDRLCFNVG-RELYVYSYRGAADLS------KPIDKREYKGT--SPTCHDFNSFTATPKGLDLLIGFTTG  195 (636)
T ss_pred             ceeeccccCCCCEEEEecC-CeEEEEEccCcchhc------cchhhhcccCC--CCceecccccccCCCCcceEEeeccC
Confidence            4666777778888877554 568999988531110      11111 12211  12222332    13444556666665


Q ss_pred             ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCC-CeeeeccCCC
Q psy10942        173 LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEP  250 (537)
Q Consensus       173 ~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~  250 (537)
                      +    +                 .+.|.       ...+.. +-.....-.  ...|+|+   .|-|.+ ..++.+-.+|
T Consensus       196 q----v-----------------q~idp-------~~~~~sklfne~r~i~--ktsvT~i---kWvpg~~~~Fl~a~~sG  242 (636)
T KOG2394|consen  196 Q----V-----------------QLIDP-------INFEVSKLFNEERLIN--KSSVTCI---KWVPGSDSLFLVAHASG  242 (636)
T ss_pred             c----e-----------------EEecc-------hhhHHHHhhhhccccc--ccceEEE---EEEeCCCceEEEEEecC
Confidence            5    6                 44444       111111 111111122  6789999   888754 4566677788


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .+.  +++........       ......+....  .+       .|..|.......+    ...+.--.+.|...+|+|
T Consensus       243 nly--ly~~~~~~~~t-------~p~~~~~k~~~--~f-------~i~t~ksk~~rNP----v~~w~~~~g~in~f~FS~  300 (636)
T KOG2394|consen  243 NLY--LYDKEIVCGAT-------APSYQALKDGD--QF-------AILTSKSKKTRNP----VARWHIGEGSINEFAFSP  300 (636)
T ss_pred             ceE--EeeccccccCC-------CCcccccCCCC--ee-------EEeeeeccccCCc----cceeEeccccccceeEcC
Confidence            888  88763311100       01111111110  11       1112211111110    111222345789999999


Q ss_pred             CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce
Q psy10942        331 NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI  410 (537)
Q Consensus       331 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  410 (537)
                      ||++||+.+.||.++|||.. ..+++..++..                                                
T Consensus       301 DG~~LA~VSqDGfLRvF~fd-t~eLlg~mkSY------------------------------------------------  331 (636)
T KOG2394|consen  301 DGKYLATVSQDGFLRIFDFD-TQELLGVMKSY------------------------------------------------  331 (636)
T ss_pred             CCceEEEEecCceEEEeecc-HHHHHHHHHhh------------------------------------------------
Confidence            99999999999999999988 44444333221                                                


Q ss_pred             EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                       .|+..|++|||||+||++|++|.-|.||.+...+.+..-++|...|..++|.
T Consensus       332 -FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  332 -FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD  383 (636)
T ss_pred             -ccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence             1289999999999999999999999999999999999999999999999998

>KOG0290|consensus

Probab=99.62  E-value=3.1e-14  Score=118.32  Aligned_cols=294  Identities=12%  Similarity=0.153  Sum_probs=188.3

Q ss_pred             ccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc----cceEEee--eccceehhhhc--CCCcceEEEEEec
Q psy10942         35 SRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE----KSLLHYY--ETSAVKELYQH--GLSSPLVRIVRSS  106 (537)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~w--d~~~~~~~~~~--~~~~~v~~~~~s~  106 (537)
                      .++.+..+...-++-++++...|.       .+.+++.|+-    .+.|.+-  |.++++.+...  .+.-+++.+.|.|
T Consensus        34 r~~eiy~Y~ap~~lya~~Ws~~~~-------~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiP  106 (364)
T KOG0290|consen   34 RRKEIYTYNAPWPLYAMNWSVRPD-------KKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIP  106 (364)
T ss_pred             ccceEEEecCCCceeeeccccCCC-------cceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecC
Confidence            344555555555666664433343       4456666652    3345554  33455554443  5557999999999


Q ss_pred             ccc-----EEEEEeCCceEEEEecccccCcccccccccceeEEe-----ecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942        107 VKR-----MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-----VGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus       107 ~~~-----~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +..     +||+.+  ..+|+|.+......       .++...+     ..+..++++..|+.-+.+++.+.+-+..   
T Consensus       107 d~~g~~pdlLATs~--D~LRlWri~~ee~~-------~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTT---  174 (364)
T KOG0290|consen  107 DSKGVYPDLLATSS--DFLRLWRIGDEESR-------VELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTT---  174 (364)
T ss_pred             CccccCcchhhccc--CeEEEEeccCcCCc-------eehhhhhccCcccccCCcccccccccCCcceeEeecccCe---
Confidence            873     465543  46999999853111       1111122     2345678999999777788877777776   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~  255 (537)
                       .                 .+||+       +++..-.-.+++..|  ..+|..+   +|...+ +.||+.+.||.+|  
T Consensus       175 -C-----------------TiWdi-------e~~~~~~vkTQLIAH--DKEV~DI---af~~~s~~~FASvgaDGSvR--  222 (364)
T KOG0290|consen  175 -C-----------------TIWDI-------ETGVSGTVKTQLIAH--DKEVYDI---AFLKGSRDVFASVGADGSVR--  222 (364)
T ss_pred             -E-----------------EEEEE-------eeccccceeeEEEec--CcceeEE---EeccCccceEEEecCCCcEE--
Confidence             6                 77999       776321111233399  9999999   998865 5677888888888  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKL  334 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~  334 (537)
                      ++|++..+                               ..-.+|.-...              ..+...++|+++ -++
T Consensus       223 mFDLR~le-------------------------------HSTIIYE~p~~--------------~~pLlRLswnkqDpny  257 (364)
T KOG0290|consen  223 MFDLRSLE-------------------------------HSTIIYEDPSP--------------STPLLRLSWNKQDPNY  257 (364)
T ss_pred             EEEecccc-------------------------------cceEEecCCCC--------------CCcceeeccCcCCchH
Confidence            88877621                               12223332221              344567788774 456


Q ss_pred             EEEEeCC-CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        335 LASGSLD-KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       335 l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      +++-..| ..|.|.|++....++..++.|..                                                 
T Consensus       258 mATf~~dS~~V~iLDiR~P~tpva~L~~H~a-------------------------------------------------  288 (364)
T KOG0290|consen  258 MATFAMDSNKVVILDIRVPCTPVARLRNHQA-------------------------------------------------  288 (364)
T ss_pred             HhhhhcCCceEEEEEecCCCcceehhhcCcc-------------------------------------------------
Confidence            6664443 56888888876666666666654                                                 


Q ss_pred             eeeEEEEcCC-CCEEEEEeCCCcEEEEECCCce------eeeEeecCCcceEEEEEec-CCCEEEEEeC
Q psy10942        414 GVWFVNFSPL-DRILISSSGDATIKLWCLTDYV------CLKSLEGHDASVLRCHFIN-KGTQIVSTGA  474 (537)
Q Consensus       414 ~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~  474 (537)
                      .|+.++|.|. ...|++++.|..+.+||+....      ++..+. -.+.|+.+.|++ .+..++.+..
T Consensus       289 ~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  289 SVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             cccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence            7777888876 4689999999999999997622      223333 456799999996 4567776654

>KOG1240|consensus

Probab=99.61  E-value=1.3e-14  Score=143.00  Aligned_cols=270  Identities=12%  Similarity=0.084  Sum_probs=171.3

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE  218 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~  218 (537)
                      +.++..+..|...+..++.+++...++++++.++.    |                 ++|+...-.....+.+..+.   
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGt----V-----------------KvW~~~k~~~~~~s~rS~lt--- 1093 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGT----V-----------------KVWNLRKLEGEGGSARSELT--- 1093 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCce----E-----------------EEeeehhhhcCcceeeeeEE---
Confidence            46778888899999999999777688888888777    9                 99998211111111222222   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---------cccccceeeeeeC--CcceE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---------FVPEAEHGAFYTG--GTVEL  287 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~v~~  287 (537)
                        -+.+...+.++   ...+.++.+|.++.||.|+  +.+++.........         .......+.....  .+ ..
T Consensus      1094 --ys~~~sr~~~v---t~~~~~~~~Av~t~DG~v~--~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S-~~ 1165 (1431)
T KOG1240|consen 1094 --YSPEGSRVEKV---TMCGNGDQFAVSTKDGSVR--VLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQS-HV 1165 (1431)
T ss_pred             --EeccCCceEEE---EeccCCCeEEEEcCCCeEE--EEEccccccccceeeeeecccccCCCceEEeecccccccc-ee
Confidence              22227788888   8889999999999999999  88887632111100         0001111111111  11 47


Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-------
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-------  360 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------  360 (537)
                      ++.+...+.|..||..........   ......+.|++++.+|.++++++|+..|.+.+||++ -..++....       
T Consensus      1166 lvy~T~~~~iv~~D~r~~~~~w~l---k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLR-F~~~i~sw~~P~~~~i 1241 (1431)
T KOG1240|consen 1166 LVYATDLSRIVSWDTRMRHDAWRL---KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLR-FRVPILSWEHPARAPI 1241 (1431)
T ss_pred             EEEEEeccceEEecchhhhhHHhh---hcCccccceeEEEecCCceEEEEecCCceEEEEEee-cCceeecccCcccCCc
Confidence            888888999999999877654332   223345789999999999999999999999999998 333333222       


Q ss_pred             ----ecC---CCCEEEEEc--CCCcEEEEECCCCeeeeeeccC-CcceEEEEEecCC--CceEEeeeeEEEEcCCCCEEE
Q psy10942        361 ----GHK---KGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKH-ALKIWTLAITKDE--NQIITGGVWFVNFSPLDRILI  428 (537)
Q Consensus       361 ----~~~---~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~  428 (537)
                          .++   .....++++  ..+.+.+|++.+|.+...+-.. ..+..+- ..|..  ..-..-......+..-+.++.
T Consensus      1242 ~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~-~~Ps~~~~kp~~~~~~~~~~~~~~~~~l 1320 (1431)
T KOG1240|consen 1242 RHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSY-ALPSNDARKPDSLAGISCGVCEKNGFLL 1320 (1431)
T ss_pred             ceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhh-hcccccCCCCCcccceeeecccCCceee
Confidence                221   124444444  5789999999999776666443 2111111 11111  000000222333444566899


Q ss_pred             EEeCCCcEEEEECCCce
Q psy10942        429 SSSGDATIKLWCLTDYV  445 (537)
Q Consensus       429 ~~~~dg~i~i~d~~~~~  445 (537)
                      +|+.|..|+.||....+
T Consensus      1321 tggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1321 TGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred             ecCCccceeeccCCCcc
Confidence            99999999999987644

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=9.5e-14  Score=133.76  Aligned_cols=238  Identities=11%  Similarity=-0.019  Sum_probs=146.5

Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      ..|.+||..+            ...+.+..+...+.+.+|+ |+++.|+..+.... ...|                 .+
T Consensus       184 ~~l~i~D~~g------------~~~~~lt~~~~~v~~p~wS-pDg~~la~~s~~~~-~~~l-----------------~~  232 (433)
T PRK04922        184 YALQVADSDG------------YNPQTILRSAEPILSPAWS-PDGKKLAYVSFERG-RSAI-----------------YV  232 (433)
T ss_pred             EEEEEECCCC------------CCceEeecCCCccccccCC-CCCCEEEEEecCCC-CcEE-----------------EE
Confidence            4688999865            2334566677779999999 78888877654321 1347                 78


Q ss_pred             HHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee-ccCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      ||+       .+++.. +.     ..  .+...+.   .|+|||+.++. .+.++.                        
T Consensus       233 ~dl-------~~g~~~~l~-----~~--~g~~~~~---~~SpDG~~l~~~~s~~g~------------------------  271 (433)
T PRK04922        233 QDL-------ATGQRELVA-----SF--RGINGAP---SFSPDGRRLALTLSRDGN------------------------  271 (433)
T ss_pred             EEC-------CCCCEEEec-----cC--CCCccCc---eECCCCCEEEEEEeCCCC------------------------
Confidence            888       666655 44     44  4445577   89999987763 233321                        


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEEccCC
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKT--VKVWSTTGG  352 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~--i~i~d~~~~  352 (537)
                                         ..|++||+.+++.      ..+..+.......+|+|||+.|+..+. +|.  |+++++. +
T Consensus       272 -------------------~~Iy~~d~~~g~~------~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~-~  325 (433)
T PRK04922        272 -------------------PEIYVMDLGSRQL------TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS-G  325 (433)
T ss_pred             -------------------ceEEEEECCCCCe------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC-C
Confidence                               2355666655542      112233334467899999998887764 333  3333433 1


Q ss_pred             ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      .+ ...+..                              .+  .                 .....+|+|||++|+..+.
T Consensus       326 g~-~~~lt~------------------------------~g--~-----------------~~~~~~~SpDG~~Ia~~~~  355 (433)
T PRK04922        326 GS-AERLTF------------------------------QG--N-----------------YNARASVSPDGKKIAMVHG  355 (433)
T ss_pred             CC-eEEeec------------------------------CC--C-----------------CccCEEECCCCCEEEEEEC
Confidence            11 111100                              00  0                 2234788999998887654


Q ss_pred             CC---cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942        433 DA---TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTCVSTFDKHALKIRNSDSEN  506 (537)
Q Consensus       433 dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~  506 (537)
                      ++   .|.+||+.+++.. .+. +........|+|||++|+..+.+   +.+.++++. +.....+..+.+.+       
T Consensus       356 ~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~-------  425 (433)
T PRK04922        356 SGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEV-------  425 (433)
T ss_pred             CCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCC-------
Confidence            33   6999999887654 333 22345567999999988877653   358888874 55556666555666       


Q ss_pred             CCccccccceeeec
Q psy10942        507 DHKGFGLPRQLCSR  520 (537)
Q Consensus       507 ~~~~~~~~~~~~s~  520 (537)
                          ...   +|+|
T Consensus       426 ----~~p---~wsp  432 (433)
T PRK04922        426 ----REP---AWSP  432 (433)
T ss_pred             ----CCC---ccCC
Confidence                666   7876

>KOG1912|consensus

Probab=99.60  E-value=1.7e-12  Score=122.32  Aligned_cols=436  Identities=14%  Similarity=0.094  Sum_probs=252.6

Q ss_pred             eeeeeeeeeccC----------CcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEE
Q psy10942          3 FCVTCFDVIPQI----------TSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVL   71 (537)
Q Consensus         3 ~~V~~~~~~~~~----------~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (537)
                      ..|+.+.|.|.+          -.-+|+++...|.|.+||...+..+..+. ...++..+  .|.+.    ......+++
T Consensus        56 s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl--~W~~~----rd~Srd~Ll  129 (1062)
T KOG1912|consen   56 SAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDL--CWVPA----RDDSRDVLL  129 (1062)
T ss_pred             cceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhhe--eeeec----cCcchheeE
Confidence            356777776533          23467888889999999999988777665 56677777  55553    122335677


Q ss_pred             EeCccceEEeeeccceehhhhcCCCc-ceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch
Q psy10942         72 AGGEKSLLHYYETSAVKELYQHGLSS-PLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS  149 (537)
Q Consensus        72 ~~~~~~~i~~wd~~~~~~~~~~~~~~-~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  149 (537)
                      .......|.+|+..+|+.+....... ...++.+.| |.+.+..-+..|.+.+-+.....    .+..+++..+.-..|.
T Consensus       130 aIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~s----ep~~pgk~~qI~sd~S  205 (1062)
T KOG1912|consen  130 AIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLS----EPDVPGKEFQITSDHS  205 (1062)
T ss_pred             EecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCC----CCCCCceeEEEecCcc
Confidence            77778899999999999998888554 555588888 45556666777877776654421    1122222222222222


Q ss_pred             h-------------------------hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHh
Q psy10942        150 D-------------------------EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEA  204 (537)
Q Consensus       150 ~-------------------------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~  204 (537)
                      +                         ....++|+|.-.+.+++. -...    +                 .++|+    
T Consensus       206 dl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~-~pre----l-----------------lv~dl----  259 (1062)
T KOG1912|consen  206 DLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFIT-FPRE----L-----------------LVFDL----  259 (1062)
T ss_pred             chhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEE-eccc----e-----------------EEEcc----
Confidence            1                         012355675555555444 3344    6                 77887    


Q ss_pred             hhccccccc--ccccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcceeccccccCCCccccc------------
Q psy10942        205 KFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTLEELEKRKTYHFPLFG------------  268 (537)
Q Consensus       205 ~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~~~iw~~~~~~~~~~~------------  268 (537)
                         +-..++  ..     -.  .+.+.-+   .+-|+  ...|++...||.+.  +|...........            
T Consensus       260 ---e~~~~l~vvp-----ie--r~~akfv---~vlP~~~rd~LfclH~nG~lt--irvrk~~~~~f~~~~~~l~~dl~~Q  324 (1062)
T KOG1912|consen  260 ---EYECCLAVVP-----IE--RGGAKFV---DVLPDPRRDALFCLHSNGRLT--IRVRKEEPTEFKKPNASLSMDLGEQ  324 (1062)
T ss_pred             ---hhhceeEEEE-----ec--cCCccee---EeccCCCcceEEEEecCCeEE--EEEeeccCccccccchhhccccccc
Confidence               544444  11     11  3333333   33444  45677778888887  7765441100000            


Q ss_pred             -----ccc---c-------c-------------------------------------------------------cceee
Q psy10942        269 -----IFV---P-------E-------------------------------------------------------AEHGA  278 (537)
Q Consensus       269 -----~~~---~-------~-------------------------------------------------------~~~~~  278 (537)
                           .+.   +       .                                                       +....
T Consensus       325 ~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg  404 (1062)
T KOG1912|consen  325 VHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDG  404 (1062)
T ss_pred             eEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcC
Confidence                 000   0       0                                                       00000


Q ss_pred             eeeC--------------------------CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        279 FYTG--------------------------GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       279 ~~~~--------------------------~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      .|+.                          ..+.+++.|...|+|.++|+.++..     ...+..|...|.++.|.-..
T Consensus       405 ~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v-----~~~fsvht~~VkgleW~g~s  479 (1062)
T KOG1912|consen  405 SHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAV-----AASFSVHTSLVKGLEWLGNS  479 (1062)
T ss_pred             CCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhh-----hhhhcccccceeeeeeccce
Confidence            0000                          0006789999999999999998865     56678899999999998666


Q ss_pred             CEEEEEeC---------CCcEEEEEccC------------CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        333 KLLASGSL---------DKTVKVWSTTG------------GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       333 ~~l~~~~~---------d~~i~i~d~~~------------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      .++-.++.         -+.+.+-|+++            ...+++.++....+.+++..-.+.-+.+||+++..+++..
T Consensus       480 slvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~m  559 (1062)
T KOG1912|consen  480 SLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLM  559 (1062)
T ss_pred             eEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHH
Confidence            54433322         13455666663            2345677777777999999999999999999877655544


Q ss_pred             ccCCcceEEEEEe-cCCCceEEe-----------------------------------------------eeeEEEEcCC
Q psy10942        392 DKHALKIWTLAIT-KDENQIITG-----------------------------------------------GVWFVNFSPL  423 (537)
Q Consensus       392 ~~~~~~i~~~~~~-~~~~~~~~~-----------------------------------------------~i~~~~~s~~  423 (537)
                      ...---++.+.|+ |.-..+..+                                               .+..|+|-  
T Consensus       560 S~a~P~it~leWsl~~~~si~qk~ls~q~sms~n~vv~ds~es~~~~~~~~a~~~sdgsq~~~a~esfafal~~mAwk--  637 (1062)
T KOG1912|consen  560 SLALPLITVLEWSLPKHPSIKQKELSKQSSMSENLVVLDSVESRIYHITLSALVVSDGSQVNTAWESFAFALCAMAWK--  637 (1062)
T ss_pred             hhcCCcEEEEeecccCCCCcccccchhhhhhhhceeeeccccchheehhhhhhhhccccchhhHHHHHHHHHHhhhcc--
Confidence            4333335555555 322211110                                               12223332  


Q ss_pred             CCEEEEEeCCCcEEEEECCCceeeeEe--ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc
Q psy10942        424 DRILISSSGDATIKLWCLTDYVCLKSL--EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  497 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~  497 (537)
                      +..++.|..+|.+.+||+...+.....  ..|.....-..+-|....++.--.|+ +-+||.+...++..+.+-+.
T Consensus       638 ~d~lv~GD~~GNl~~WDlg~R~SRg~~d~p~~ra~~l~~~~ipG~~~~lvl~~d~-~~lwdtk~~~lV~siag~ds  712 (1062)
T KOG1912|consen  638 DDILVVGDVEGNLVVWDLGRRQSRGVRDSPDPRAHSLTFPQIPGDHTTLVLELDW-LPLWDTKADTLVLSIAGMDS  712 (1062)
T ss_pred             CCeeEeecccCceeEEecccccccCccCCCCchhhheecccCCCCceEEEEecCc-ceecccccceeeeeeccCCc
Confidence            458999999999999998653222211  11222222223333222233333333 66777666666665544433

>KOG2139|consensus

Probab=99.60  E-value=1.5e-13  Score=117.86  Aligned_cols=250  Identities=8%  Similarity=-0.017  Sum_probs=158.0

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .++.-++++  +.-..++++..|-+|++||-++ +....++  ....+.++  .+-|.       ....+++|...| |.
T Consensus        99 ~dlr~~aWh--qH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtcl--awRPl-------saselavgCr~g-Ic  165 (445)
T KOG2139|consen   99 IDLRGVAWH--QHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCL--AWRPL-------SASELAVGCRAG-IC  165 (445)
T ss_pred             cceeeEeec--hhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEE--EeccC-------Ccceeeeeecce-eE
Confidence            567788888  6666788889999999999776 4333333  45567777  56775       555778887555 99


Q ss_pred             eeeccce----e----------hhhhcCCCcceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEe
Q psy10942         81 YYETSAV----K----------ELYQHGLSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        81 ~wd~~~~----~----------~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +|.....    +          .+....+|-.|++|+|.+||..|++++. |..|+|||.+++           ..+...
T Consensus       166 iW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg-----------~~~pL~  234 (445)
T KOG2139|consen  166 IWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTG-----------QKIPLI  234 (445)
T ss_pred             EEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCC-----------Cccccc
Confidence            9976431    1          1222334469999999999999999885 678999999994           333222


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRD  223 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~  223 (537)
                      ....+.+.-+.|+ |++..++.++-+..    .                 ++|+..      ++..+.  ..     +  
T Consensus       235 ~~glgg~slLkwS-Pdgd~lfaAt~dav----f-----------------rlw~e~------q~wt~erw~l-----g--  279 (445)
T KOG2139|consen  235 PKGLGGFSLLKWS-PDGDVLFAATCDAV----F-----------------RLWQEN------QSWTKERWIL-----G--  279 (445)
T ss_pred             ccCCCceeeEEEc-CCCCEEEEecccce----e-----------------eeehhc------ccceecceec-----c--
Confidence            2334457889999 78888888888877    8                 999650      222222  22     2  


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                       .+.|...   .|+|+|++|+...... -+  ++.+...+.....         .+          .++......+-|+.
T Consensus       280 -sgrvqta---cWspcGsfLLf~~sgs-p~--lysl~f~~~~~~~---------~~----------~~~~k~~lliaDL~  333 (445)
T KOG2139|consen  280 -SGRVQTA---CWSPCGSFLLFACSGS-PR--LYSLTFDGEDSVF---------LR----------PQSIKRVLLIADLQ  333 (445)
T ss_pred             -CCceeee---eecCCCCEEEEEEcCC-ce--EEEEeecCCCccc---------cC----------cccceeeeeeccch
Confidence             4578888   9999998877554432 23  4454432211110         00          11111222233332


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK  342 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~  342 (537)
                      .-..     .....--.+++.+++|.|.|.+|++.-..+
T Consensus       334 e~ti-----~ag~~l~cgeaq~lawDpsGeyLav~fKg~  367 (445)
T KOG2139|consen  334 EVTI-----CAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ  367 (445)
T ss_pred             hhhh-----hcCcccccCccceeeECCCCCEEEEEEcCC
Confidence            2110     000011246789999999999999976544

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=5.3e-14  Score=134.75  Aligned_cols=237  Identities=15%  Similarity=0.052  Sum_probs=147.2

Q ss_pred             eEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         78 LLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      .|.++|.+...........+.+.+.+|||||+.||..+.   +..|.+|++.++           +. +.+....+.+..
T Consensus       180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G-----------~~-~~l~~~~~~~~~  247 (429)
T PRK03629        180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-----------AV-RQVASFPRHNGA  247 (429)
T ss_pred             eEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCC-----------Ce-EEccCCCCCcCC
Confidence            699999876554443445568999999999999987653   357999999873           22 222222333557


Q ss_pred             hhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEe
Q psy10942        155 IALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~  232 (537)
                      ++|+ |+++.|++... ++.  ..|                 .+||+       +++... +.     .+  ...+... 
T Consensus       248 ~~~S-PDG~~La~~~~~~g~--~~I-----------------~~~d~-------~tg~~~~lt-----~~--~~~~~~~-  292 (429)
T PRK03629        248 PAFS-PDGSKLAFALSKTGS--LNL-----------------YVMDL-------ASGQIRQVT-----DG--RSNNTEP-  292 (429)
T ss_pred             eEEC-CCCCEEEEEEcCCCC--cEE-----------------EEEEC-------CCCCEEEcc-----CC--CCCcCce-
Confidence            8899 78887776532 222  237                 77888       666555 54     44  4566778 


Q ss_pred             ccCcccCCCeeeeccCC-CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeee
Q psy10942        233 RGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNV  311 (537)
Q Consensus       233 ~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~  311 (537)
                        .|+|||+.|+..+.+ +...  +|.+                                         ++.++...   
T Consensus       293 --~wSPDG~~I~f~s~~~g~~~--Iy~~-----------------------------------------d~~~g~~~---  324 (429)
T PRK03629        293 --TWFPDSQNLAYTSDQAGRPQ--VYKV-----------------------------------------NINGGAPQ---  324 (429)
T ss_pred             --EECCCCCEEEEEeCCCCCce--EEEE-----------------------------------------ECCCCCeE---
Confidence              999999988766543 3333  4332                                         33322210   


Q ss_pred             ecccccccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeee
Q psy10942        312 LRGHKKGHEKDINCVTVSPNDKLLASGSLDK---TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV  388 (537)
Q Consensus       312 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  388 (537)
                         .+..+........|+|||++++..+.++   .|.+||+.                                 +++..
T Consensus       325 ---~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~---------------------------------~g~~~  368 (429)
T PRK03629        325 ---RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA---------------------------------TGGVQ  368 (429)
T ss_pred             ---EeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC---------------------------------CCCeE
Confidence               0111122345678999999988866432   34555554                                 22211


Q ss_pred             eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc---EEEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942        389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT---IKLWCLTDYVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~---i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                      . +....                  ......|+|||++|+..+.++.   +.++++ ++.....+.+|.+.+...+|+|-
T Consensus       369 ~-Lt~~~------------------~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        369 V-LTDTF------------------LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             E-eCCCC------------------CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCCC
Confidence            0 10000                  1223568999999999887764   667777 45566777778888999999873

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.59  E-value=1.5e-13  Score=115.60  Aligned_cols=105  Identities=16%  Similarity=0.186  Sum_probs=84.4

Q ss_pred             eeeEEEEcCCCCEEEEE--eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCee
Q psy10942        414 GVWFVNFSPLDRILISS--SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTC  488 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~  488 (537)
                      +|.+++|+|+|+.+|+.  ..++.|.+||++ ++.+..+.  ...++.+.|+|+|++|++++.+   |.|.+||.++.+.
T Consensus        61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~  137 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK  137 (194)
T ss_pred             ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence            68889999999887655  356799999996 66666664  4677899999999999998754   6699999998888


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC------CCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW------SPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~------dg~i~vW  537 (537)
                      +...+..  .+           +.+   +|||||++|+++..      |+.++||
T Consensus       138 i~~~~~~--~~-----------t~~---~WsPdGr~~~ta~t~~r~~~dng~~Iw  176 (194)
T PF08662_consen  138 ISTFEHS--DA-----------TDV---EWSPDGRYLATATTSPRLRVDNGFKIW  176 (194)
T ss_pred             eeccccC--cE-----------EEE---EEcCCCCEEEEEEeccceeccccEEEE
Confidence            8776432  35           677   99999999999865      6777776

>KOG1272|consensus

Probab=99.59  E-value=4.1e-15  Score=131.38  Aligned_cols=209  Identities=17%  Similarity=0.221  Sum_probs=164.1

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--  363 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--  363 (537)
                      +.++.|+..|.+-.+|..++.....+      .-...|.++.|..+.+++|++ ....+++||-.  +..+.++..+.  
T Consensus       142 rhlllgGrKGHlAa~Dw~t~~L~~Ei------~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~--GtElHClk~~~~v  212 (545)
T KOG1272|consen  142 RHLLLGGRKGHLAAFDWVTKKLHFEI------NVMETVRDVTFLHNEQFFAVA-QKKYVYVYDNN--GTELHCLKRHIRV  212 (545)
T ss_pred             cEEEecCCccceeeeecccceeeeee------ehhhhhhhhhhhcchHHHHhh-hhceEEEecCC--CcEEeehhhcCch
Confidence            68999999999999999998754333      224568899999888888877 45779999976  34444444433  


Q ss_pred             -------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        364 -------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       364 -------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                             ---+|++++..|.++.-|+.+|+.+..+....+                 .+..++-+|-+..+-+|..+|+|
T Consensus       213 ~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G-----------------~~~vm~qNP~NaVih~GhsnGtV  275 (545)
T KOG1272|consen  213 ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAG-----------------RTDVMKQNPYNAVIHLGHSNGTV  275 (545)
T ss_pred             hhhcccchhheeeecccCCceEEEeechhhhhHHHHccCC-----------------ccchhhcCCccceEEEcCCCceE
Confidence                   345778889999999999999999988877766                 44555566667788899999999


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccce
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ  516 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  516 (537)
                      .+|.....+++..+-.|.++|.++++.++|+|+||++.|..++|||++.-..+.++.. ..+.           ..+   
T Consensus       276 SlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a-----------~~l---  340 (545)
T KOG1272|consen  276 SLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPA-----------SNL---  340 (545)
T ss_pred             EecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCc-----------ccc---
Confidence            9999999999999999999999999999999999999999999999998776666544 2233           555   


Q ss_pred             eeecCCCEEEEEeCCCCEEeC
Q psy10942        517 LCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       517 ~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++|..|-+.  .+....|.||
T Consensus       341 s~SqkglLA--~~~G~~v~iw  359 (545)
T KOG1272|consen  341 SLSQKGLLA--LSYGDHVQIW  359 (545)
T ss_pred             cccccccee--eecCCeeeee
Confidence            787766433  3445567776

>KOG2321|consensus

Probab=99.57  E-value=6.5e-13  Score=120.85  Aligned_cols=186  Identities=14%  Similarity=0.197  Sum_probs=134.2

Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                      .++....|+-++++.+..     ...+....+.++++..++...+|++|+.+|.|..||.+ ....+..+.....     
T Consensus       150 ~~gsg~evYRlNLEqGrf-----L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR-~ksrv~~l~~~~~-----  218 (703)
T KOG2321|consen  150 LVGSGSEVYRLNLEQGRF-----LNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR-DKSRVGTLDAASS-----  218 (703)
T ss_pred             EeecCcceEEEEcccccc-----ccccccccccceeeeecCccceEEecccCceEEEecch-hhhhheeeecccc-----
Confidence            333445677778888765     44455556889999999999999999999999999998 4444444332211     


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS  449 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~  449 (537)
                                           +..+          |.+..  ...|+++.|+.+|-.+++|..+|.+.|||++..+++..
T Consensus       219 ---------------------v~s~----------pg~~~--~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~  265 (703)
T KOG2321|consen  219 ---------------------VNSH----------PGGDA--APSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV  265 (703)
T ss_pred             ---------------------cCCC----------ccccc--cCcceEEEecCCceeEEeeccCCcEEEEEcccCCceee
Confidence                                 0000          00000  00689999999999999999999999999999877665


Q ss_pred             ee-cCCcceEEEEEecC--CCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        450 LE-GHDASVLRCHFINK--GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       450 ~~-~~~~~v~~~~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      -. +..-+|..+.|.+.  ++.+++. ....++|||-.+|+....++.-. .+           ..+   ++-|++.+++
T Consensus       266 kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~-~l-----------ND~---C~~p~sGm~f  329 (703)
T KOG2321|consen  266 KDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTS-DL-----------NDF---CFVPGSGMFF  329 (703)
T ss_pred             cccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccC-Cc-----------Cce---eeecCCceEE
Confidence            43 23457889999775  4455554 44679999999999888776433 35           666   9999999999


Q ss_pred             EEeCCCCEE
Q psy10942        527 RGGWSPQVV  535 (537)
Q Consensus       527 s~~~dg~i~  535 (537)
                      +|-.++.+.
T Consensus       330 ~Ane~~~m~  338 (703)
T KOG2321|consen  330 TANESSKMH  338 (703)
T ss_pred             EecCCCcce
Confidence            998877654

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=3.8e-13  Score=129.05  Aligned_cols=241  Identities=9%  Similarity=-0.033  Sum_probs=148.0

Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      ..|.++|.++            ...+.+..+...+.+.+|+ |+++.|+..+.... ...|                 .+
T Consensus       176 ~~L~~~D~dG------------~~~~~l~~~~~~v~~p~wS-PDG~~la~~s~~~~-~~~I-----------------~~  224 (427)
T PRK02889        176 YQLQISDADG------------QNAQSALSSPEPIISPAWS-PDGTKLAYVSFESK-KPVV-----------------YV  224 (427)
T ss_pred             cEEEEECCCC------------CCceEeccCCCCcccceEc-CCCCEEEEEEccCC-CcEE-----------------EE
Confidence            3577777654            3344556677788999999 78888877664321 1347                 88


Q ss_pred             HHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      ||+       .+++.. +.     ..  .+.+...   +|+|||+.|+ +.+.++...  +|.++.              
T Consensus       225 ~dl-------~~g~~~~l~-----~~--~g~~~~~---~~SPDG~~la~~~~~~g~~~--Iy~~d~--------------  271 (427)
T PRK02889        225 HDL-------ATGRRRVVA-----NF--KGSNSAP---AWSPDGRTLAVALSRDGNSQ--IYTVNA--------------  271 (427)
T ss_pred             EEC-------CCCCEEEee-----cC--CCCccce---EECCCCCEEEEEEccCCCce--EEEEEC--------------
Confidence            888       776655 44     34  4456678   8999998886 455666655  554432              


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCce
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLK  354 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~  354 (537)
                                                 .++..      ..+..+........|+|||+.|+..+. ++...+|.+.....
T Consensus       272 ---------------------------~~~~~------~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g  318 (427)
T PRK02889        272 ---------------------------DGSGL------RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG  318 (427)
T ss_pred             ---------------------------CCCCc------EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC
Confidence                                       22210      111223333456789999998887654 45555655431111


Q ss_pred             eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942        355 LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       355 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  434 (537)
                      ....+...                              +.                   .....+|||||++|+..+.++
T Consensus       319 ~~~~lt~~------------------------------g~-------------------~~~~~~~SpDG~~Ia~~s~~~  349 (427)
T PRK02889        319 AAQRVTFT------------------------------GS-------------------YNTSPRISPDGKLLAYISRVG  349 (427)
T ss_pred             ceEEEecC------------------------------CC-------------------CcCceEECCCCCEEEEEEccC
Confidence            11111100                              00                   223467899999998776554


Q ss_pred             ---cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEecCCccceeccCCCCCC
Q psy10942        435 ---TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIRNSDSENDH  508 (537)
Q Consensus       435 ---~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~  508 (537)
                         .|.+||+.+++... +... .......|+|||++|+.++.++   .+.+.++ +++....+..+.+.+         
T Consensus       350 g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~---------  417 (427)
T PRK02889        350 GAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDV---------  417 (427)
T ss_pred             CcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCC---------
Confidence               59999998876543 3322 2346789999999998877654   3556666 566666666666666         


Q ss_pred             ccccccceeeecC
Q psy10942        509 KGFGLPRQLCSRN  521 (537)
Q Consensus       509 ~~~~~~~~~~s~~  521 (537)
                        ...   +|+|-
T Consensus       418 --~~p---~wsp~  425 (427)
T PRK02889        418 --REP---SWGPF  425 (427)
T ss_pred             --CCC---ccCCC
Confidence              666   88874

>KOG1240|consensus

Probab=99.56  E-value=5.6e-13  Score=131.72  Aligned_cols=204  Identities=14%  Similarity=0.125  Sum_probs=138.3

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC-ceee-----E-----------EE---EecCCCCEEEEEcCCCcEE
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG-LKLL-----N-----------VL---RGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-~~~~-----~-----------~~---~~~~~~~~l~~~~~d~~i~  378 (537)
                      -...+.++.+.+.++.+|+++.||.|++.++... .+..     +           .+   ..+.....++.+..-+.|.
T Consensus      1097 ~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv 1176 (1431)
T KOG1240|consen 1097 EGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIV 1176 (1431)
T ss_pred             cCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceE
Confidence            3567888899999999999999999999988731 1110     0           00   1111123778888899999


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-CCcce
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-HDASV  457 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v  457 (537)
                      .||++.......++....               .|.|++++.+|.+.+++.|...|.+.+||++-+.++..... +..++
T Consensus      1177 ~~D~r~~~~~w~lk~~~~---------------hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i 1241 (1431)
T KOG1240|consen 1177 SWDTRMRHDAWRLKNQLR---------------HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPI 1241 (1431)
T ss_pred             EecchhhhhHHhhhcCcc---------------ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCc
Confidence            999998765555433221               23789999999999999999999999999999888877752 45678


Q ss_pred             EEEEEecC---CCEEEEEe--CCCcEEEEECCCCeeEEEecCCcc-ceeccCCCC----CCccccccceeeecCCCEEEE
Q psy10942        458 LRCHFINK---GTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHAL-KIRNSDSEN----DHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       458 ~~~~~s~~---~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~-~i~~~~~~~----~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      +.+..+|-   ....++++  ..+.|.+|++.+|.+...+-..++ +........    ++...+...-++..-+..+.+
T Consensus      1242 ~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~lt 1321 (1431)
T KOG1240|consen 1242 RHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLT 1321 (1431)
T ss_pred             ceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeee
Confidence            88877763   34555554  467899999999977777655422 111110000    011111111145555678899


Q ss_pred             EeCCCCEEeC
Q psy10942        528 GGWSPQVVVY  537 (537)
Q Consensus       528 ~~~dg~i~vW  537 (537)
                      |+.|..||.|
T Consensus      1322 ggsd~kIR~w 1331 (1431)
T KOG1240|consen 1322 GGSDMKIRKW 1331 (1431)
T ss_pred             cCCccceeec
Confidence            9999999998

>KOG1354|consensus

Probab=99.55  E-value=1.3e-12  Score=111.44  Aligned_cols=251  Identities=14%  Similarity=0.200  Sum_probs=167.3

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCc-cccc-----------------ccccccceeeeeeCCcce
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHF-PLFG-----------------IFVPEAEHGAFYTGGTVE  286 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~v~  286 (537)
                      ...|.++   .|...|.+|++|..+|.+.  ++.-..... ....                 .....+..+..+......
T Consensus        25 adiis~v---ef~~~Ge~LatGdkgGRVv--~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a   99 (433)
T KOG1354|consen   25 ADIISAV---EFDHYGERLATGDKGGRVV--LFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLA   99 (433)
T ss_pred             hcceeeE---EeecccceEeecCCCCeEE--EeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCcc
Confidence            5678899   9999999999999999998  886554321 0000                 000111122222222226


Q ss_pred             EEEEEeCCCeEEEEECCCCceee------------------e-------------eecccccccCCCeEEEEEcCCCCEE
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLL------------------N-------------VLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~------------------~-------------~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      .++....|.+|++|.+.......                  .             .....-..|.--|+++.++.|...+
T Consensus       100 ~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~  179 (433)
T KOG1354|consen  100 EFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETF  179 (433)
T ss_pred             EEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceE
Confidence            77788889999999875432211                  0             0001124577789999999999988


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCC------------------CCEEEEEcCCCcEEEEECCCCeee----eeecc
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKK------------------GTQIVSTGADGLLKLWSIKTSTCV----STFDK  393 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~  393 (537)
                      +++ .|-.|.+|++.-..+........|.                  .+.++..+..|+|++.|++.....    +.++.
T Consensus       180 lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEe  258 (433)
T KOG1354|consen  180 LSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEE  258 (433)
T ss_pred             eec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcc
Confidence            876 5788999998855555444444332                  678888999999999999865322    12222


Q ss_pred             CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEEC-CCceeeeEeecCCc------------c---e
Q psy10942        394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCL-TDYVCLKSLEGHDA------------S---V  457 (537)
Q Consensus       394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~------------~---v  457 (537)
                      ...+...--|+.     +...|..+.|+++|+|+++-+. -+|++||+ ...+++.+++.|..            .   -
T Consensus       259 pedp~~rsffse-----iIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdK  332 (433)
T KOG1354|consen  259 PEDPSSRSFFSE-----IISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDK  332 (433)
T ss_pred             ccCCcchhhHHH-----HhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhhe
Confidence            222211111110     1126889999999999998654 68999999 45677777776642            1   2


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      ..++|+.++.+++||+..+.+++++...|.
T Consensus       333 Fec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  333 FECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             eEEEEcCCcceEecccccceEEEecCCCCc
Confidence            468899999999999999999999976553

>KOG2139|consensus

Probab=99.55  E-value=1.2e-12  Score=112.46  Aligned_cols=293  Identities=13%  Similarity=0.121  Sum_probs=172.8

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-chhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-FSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      .+..++|++.-..+|++..|..|++|+-..            .....++. ....|.+++|-|-..+.|++++..+    
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~kss------------t~pt~Lks~sQrnvtclawRPlsaselavgCr~g----  163 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS------------TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG----  163 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCC------------CCCceecchhhcceeEEEeccCCcceeeeeecce----
Confidence            688899999877899999999999999776            22223332 3446999999987788888888766    


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccc---cccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC-Cc
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQS---SSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME-PS  251 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~---~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d-~~  251 (537)
                       |                 .+|...........   +... .......||   .+|+++   +|.+||..+++++.+ ..
T Consensus       164 -I-----------------ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh---~pVtsm---qwn~dgt~l~tAS~gsss  219 (445)
T KOG2139|consen  164 -I-----------------CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH---NPVTSM---QWNEDGTILVTASFGSSS  219 (445)
T ss_pred             -e-----------------EEEEcCcccccccccccccccchhheeCCCC---ceeeEE---EEcCCCCEEeecccCcce
Confidence             6                 77765211111110   0000 111111244   789999   999999888877653 44


Q ss_pred             ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC
Q psy10942        252 TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN  331 (537)
Q Consensus       252 i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  331 (537)
                      |.  +|+.+.                                           +....     ......+.++-+.||||
T Consensus       220 i~--iWdpdt-------------------------------------------g~~~p-----L~~~glgg~slLkwSPd  249 (445)
T KOG2139|consen  220 IM--IWDPDT-------------------------------------------GQKIP-----LIPKGLGGFSLLKWSPD  249 (445)
T ss_pred             EE--EEcCCC-------------------------------------------CCccc-----ccccCCCceeeEEEcCC
Confidence            55  555544                                           43211     11123456888999999


Q ss_pred             CCEEEEEeCCCcEEEEEccCCce---------eeEEEEecCCCCEEEE-EcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGLK---------LLNVLRGHKKGTQIVS-TGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~~---------~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      +.+|+.+.-|+..++|+......         .++.--..+.|.+++. .+....  +|.+.....-..+.. ...+.++
T Consensus       250 gd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~--lysl~f~~~~~~~~~-~~~~k~~  326 (445)
T KOG2139|consen  250 GDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPR--LYSLTFDGEDSVFLR-PQSIKRV  326 (445)
T ss_pred             CCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCce--EEEEeecCCCccccC-cccceee
Confidence            99999999999999996552221         2333334455554433 333332  232221111111110 0111111


Q ss_pred             E--------EecCCCceEEeeeeEEEEcCCCCEEEEEeCCC--------cEEEEECCCceeeeEe-ec--CCcceEEEEE
Q psy10942        402 A--------ITKDENQIITGGVWFVNFSPLDRILISSSGDA--------TIKLWCLTDYVCLKSL-EG--HDASVLRCHF  462 (537)
Q Consensus       402 ~--------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~-~~--~~~~v~~~~~  462 (537)
                      .        -...++.+..+++.+++|+|.|.+||+....+        .|.+||...-..+.-. -+  .......+.|
T Consensus       327 lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF  406 (445)
T KOG2139|consen  327 LLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISF  406 (445)
T ss_pred             eeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEe
Confidence            1        11124566677899999999999999986543        3667777653332221 11  1112455677


Q ss_pred             ec---CCCEEEEEeCCCcEEEEEC
Q psy10942        463 IN---KGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       463 s~---~~~~l~s~~~dg~v~vwd~  483 (537)
                      +|   ++.+|..+=..|.+.-|++
T Consensus       407 ~pl~n~g~lLsiaWsTGriq~ypl  430 (445)
T KOG2139|consen  407 GPLKNEGRLLSIAWSTGRIQRYPL  430 (445)
T ss_pred             eecccCCcEEEEEeccCceEeeee
Confidence            76   5667777767777777765

>KOG1523|consensus

Probab=99.54  E-value=1.9e-13  Score=115.45  Aligned_cols=201  Identities=14%  Similarity=0.150  Sum_probs=146.6

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ..+|+|.   +|++|+..+|.+.....+.  |+.....+                                   .|.   
T Consensus        10 ~~pitch---Awn~drt~iAv~~~~~evh--iy~~~~~~-----------------------------------~w~---   46 (361)
T KOG1523|consen   10 LEPITCH---AWNSDRTQIAVSPNNHEVH--IYSMLGAD-----------------------------------LWE---   46 (361)
T ss_pred             cCceeee---eecCCCceEEeccCCceEE--EEEecCCC-----------------------------------Cce---
Confidence            5678888   9999988888887777777  66655421                                   011   


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                        .     ...+..|...|+.+.|+|..+.|++++.|..-++|....+.+-..++.                        
T Consensus        47 --~-----~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkptlv------------------------   95 (361)
T KOG1523|consen   47 --P-----AHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLV------------------------   95 (361)
T ss_pred             --e-----ceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecccee------------------------
Confidence              0     345678999999999999999999999999999999853333222111                        


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee----eEeecCCcceEEE
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL----KSLEGHDASVLRC  460 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~  460 (537)
                            +..++.                 ..+++.|+|.++.+|+|+....|.+|-++..+--    +.-+.+...|+++
T Consensus        96 ------LlRiNr-----------------AAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sl  152 (361)
T KOG1523|consen   96 ------LLRINR-----------------AATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSL  152 (361)
T ss_pred             ------EEEecc-----------------ceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeee
Confidence                  111111                 7788999999999999999999999987653221    1223466789999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECC-----C-------------CeeEEEecCCccceeccCCCCCCccccccceeeecCC
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIK-----T-------------STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~-----~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      .|+|++-+|++|+.|+..||+..-     .             |+++..+....+.+           ..+   .|+|+|
T Consensus       153 dWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwv-----------h~v---~fs~sG  218 (361)
T KOG1523|consen  153 DWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWV-----------HGV---LFSPSG  218 (361)
T ss_pred             eccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCce-----------eee---EeCCCC
Confidence            999999999999999999999641     1             22333333333445           667   999999


Q ss_pred             CEEEEEeCCCCEEe
Q psy10942        523 DCEYRGGWSPQVVV  536 (537)
Q Consensus       523 ~~l~s~~~dg~i~v  536 (537)
                      ..|+=.+.|..+.+
T Consensus       219 ~~lawv~Hds~v~~  232 (361)
T KOG1523|consen  219 NRLAWVGHDSTVSF  232 (361)
T ss_pred             CEeeEecCCCceEE
Confidence            99999999988754

>KOG2315|consensus

Probab=99.52  E-value=2.4e-11  Score=110.70  Aligned_cols=105  Identities=14%  Similarity=0.201  Sum_probs=84.1

Q ss_pred             eeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCee
Q psy10942        414 GVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTC  488 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~  488 (537)
                      +|.++.|+|+++.+++..  .-..+.|||++ +.++..+.  .++-+++-|+|.|++|+.++-+   |.+-|||+.+.++
T Consensus       272 PVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~  348 (566)
T KOG2315|consen  272 PVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL  348 (566)
T ss_pred             CceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence            899999999998776654  45689999986 45665554  5677889999999999988865   7899999999999


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC------CCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW------SPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~------dg~i~vW  537 (537)
                      +..+......             -+   .|+|||++++|+..      |+.++||
T Consensus       349 i~~~~a~~tt-------------~~---eW~PdGe~flTATTaPRlrvdNg~Kiw  387 (566)
T KOG2315|consen  349 IAKFKAANTT-------------VF---EWSPDGEYFLTATTAPRLRVDNGIKIW  387 (566)
T ss_pred             ccccccCCce-------------EE---EEcCCCcEEEEEeccccEEecCCeEEE
Confidence            8888765543             35   99999999999876      5666666

>KOG3881|consensus

Probab=99.51  E-value=3.4e-12  Score=110.90  Aligned_cols=196  Identities=12%  Similarity=0.125  Sum_probs=150.6

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---eee---------EEEEecCC-CCEEEEEcCC--CcEEEEEC
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL---KLL---------NVLRGHKK-GTQIVSTGAD--GLLKLWSI  382 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---~~~---------~~~~~~~~-~~~l~~~~~d--~~i~i~d~  382 (537)
                      ....+|..++.. |+ .|+++-.+|.+.+|....+.   ..+         ..+..++. ...+++|+..  ..+.+||+
T Consensus       103 l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdl  180 (412)
T KOG3881|consen  103 LGTKSIKGLKLA-DG-TLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDL  180 (412)
T ss_pred             cccccccchhhc-CC-EEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeec
Confidence            345667776664 34 67778889999999987321   122         22222333 4566779998  89999999


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcceEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDY-VCLKSLEGHDASVLR  459 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~  459 (537)
                      .+.+.+..-..-...-..+..        --.++++.|-+.  ...||+++.-+.+++||.+.+ +++..+.-...++++
T Consensus       181 e~~~qiw~aKNvpnD~L~LrV--------PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~  252 (412)
T KOG3881|consen  181 EQSKQIWSAKNVPNDRLGLRV--------PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISS  252 (412)
T ss_pred             ccceeeeeccCCCCcccccee--------eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCccee
Confidence            988766554332221111110        115778889887  889999999999999999874 567788877889999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        460 CHFINKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       460 ~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +...|+++++++|..-+.+..+|++.++.+.. +.+-.+.|           +++   ..+|.+++|+++|-|..|||+
T Consensus       253 ~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsi-----------rsi---h~hp~~~~las~GLDRyvRIh  317 (412)
T KOG3881|consen  253 TGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSI-----------RSI---HCHPTHPVLASCGLDRYVRIH  317 (412)
T ss_pred             eeecCCCcEEEEecccchhheecccCceeeccccCCccCCc-----------ceE---EEcCCCceEEeeccceeEEEe
Confidence            99999999999999999999999999998876 88888899           899   999999999999999999985

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=1.8e-12  Score=125.21  Aligned_cols=225  Identities=9%  Similarity=-0.038  Sum_probs=139.2

Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      ..|.++|.++            ...+.+..|...+.+.+|+ |+++.|+..+.... ...|                 .+
T Consensus       182 ~~l~~~d~dg------------~~~~~lt~~~~~v~~p~wS-pDG~~lay~s~~~g-~~~i-----------------~~  230 (435)
T PRK05137        182 KRLAIMDQDG------------ANVRYLTDGSSLVLTPRFS-PNRQEITYMSYANG-RPRV-----------------YL  230 (435)
T ss_pred             eEEEEECCCC------------CCcEEEecCCCCeEeeEEC-CCCCEEEEEEecCC-CCEE-----------------EE
Confidence            3688888865            3345677788889999999 68888877664321 1448                 88


Q ss_pred             HHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee-ccCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      ||+       .+++.. +.     .+  .+.+...   +|+|||+.|+. .+.++..                       
T Consensus       231 ~dl-------~~g~~~~l~-----~~--~g~~~~~---~~SPDG~~la~~~~~~g~~-----------------------  270 (435)
T PRK05137        231 LDL-------ETGQRELVG-----NF--PGMTFAP---RFSPDGRKVVMSLSQGGNT-----------------------  270 (435)
T ss_pred             EEC-------CCCcEEEee-----cC--CCcccCc---EECCCCCEEEEEEecCCCc-----------------------
Confidence            998       777655 55     56  6667788   99999988763 3333332                       


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEccCC
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DK--TVKVWSTTGG  352 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~--~i~i~d~~~~  352 (537)
                                          .|.+||+.++..      ..+..+........|+|||+.++..+. +|  .|+++|+. +
T Consensus       271 --------------------~Iy~~d~~~~~~------~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~-g  323 (435)
T PRK05137        271 --------------------DIYTMDLRSGTT------TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD-G  323 (435)
T ss_pred             --------------------eEEEEECCCCce------EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC-C
Confidence                                244445544432      112233444567899999998887763 22  34444544 1


Q ss_pred             ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      ... ..+...                                ..                 ......|+|||++|+....
T Consensus       324 ~~~-~~lt~~--------------------------------~~-----------------~~~~~~~SpdG~~ia~~~~  353 (435)
T PRK05137        324 SNP-RRISFG--------------------------------GG-----------------RYSTPVWSPRGDLIAFTKQ  353 (435)
T ss_pred             CCe-EEeecC--------------------------------CC-----------------cccCeEECCCCCEEEEEEc
Confidence            111 111100                                00                 3445678999998887664


Q ss_pred             C---CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC------CcEEEEECCCCeeEEEec
Q psy10942        433 D---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD------GLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       433 d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d------g~v~vwd~~~~~~~~~~~  493 (537)
                      +   ..|.+||+..+.. ..+. ....+..+.|+|||+.|+..+.+      ..++++|+..++. ..+.
T Consensus       354 ~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~  420 (435)
T PRK05137        354 GGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP  420 (435)
T ss_pred             CCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc
Confidence            3   3688888765443 3333 22346788999999998876543      2578888865544 3443

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=3.6e-13  Score=129.75  Aligned_cols=237  Identities=11%  Similarity=0.021  Sum_probs=143.9

Q ss_pred             ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                      ..|.+||...........+.+.+.+.+|+|||+.|+..+.+   ..|.+||+.++           +. ..+..+.+...
T Consensus       184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g-----------~~-~~l~~~~g~~~  251 (433)
T PRK04922        184 YALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATG-----------QR-ELVASFRGING  251 (433)
T ss_pred             EEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCC-----------CE-EEeccCCCCcc
Confidence            36899998654433333445689999999999999987743   46999999873           32 23333444456


Q ss_pred             hhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        154 DIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      +.+|+ |+++.+++.. .++.  ..|                 .+||+       .+++.. +.     .+  .......
T Consensus       252 ~~~~S-pDG~~l~~~~s~~g~--~~I-----------------y~~d~-------~~g~~~~lt-----~~--~~~~~~~  297 (433)
T PRK04922        252 APSFS-PDGRRLALTLSRDGN--PEI-----------------YVMDL-------GSRQLTRLT-----NH--FGIDTEP  297 (433)
T ss_pred             CceEC-CCCCEEEEEEeCCCC--ceE-----------------EEEEC-------CCCCeEECc-----cC--CCCccce
Confidence            78999 6777775543 3332  347                 88888       766655 55     55  5555677


Q ss_pred             eccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        232 ERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                         +|+|||++|+..+. ++...                                           |.++++.+++.. .
T Consensus       298 ---~~spDG~~l~f~sd~~g~~~-------------------------------------------iy~~dl~~g~~~-~  330 (433)
T PRK04922        298 ---TWAPDGKSIYFTSDRGGRPQ-------------------------------------------IYRVAASGGSAE-R  330 (433)
T ss_pred             ---EECCCCCEEEEEECCCCCce-------------------------------------------EEEEECCCCCeE-E
Confidence               89999998886653 23322                                           333333333211 0


Q ss_pred             eecccccccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        311 VLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      +     ..+......++|+|||+.++..+.++   .|.+||+. +.+.. .+.                           
T Consensus       331 l-----t~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~-~g~~~-~Lt---------------------------  376 (433)
T PRK04922        331 L-----TFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS-TGSVR-TLT---------------------------  376 (433)
T ss_pred             e-----ecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC-CCCeE-ECC---------------------------
Confidence            0     01112234689999999998765433   46666665 22111 110                           


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                          ...                   ......|+|||++++..+.+   +.|.++++.. .....+..+.+.+...+|+|
T Consensus       377 ----~~~-------------------~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g-~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        377 ----PGS-------------------LDESPSFAPNGSMVLYATREGGRGVLAAVSTDG-RVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             ----CCC-------------------CCCCceECCCCCEEEEEEecCCceEEEEEECCC-CceEEcccCCCCCCCCccCC
Confidence                000                   11234689999888776653   4577888754 44566665667778888876

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=1.2e-12  Score=126.40  Aligned_cols=237  Identities=12%  Similarity=0.031  Sum_probs=144.1

Q ss_pred             ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                      ..|.++|...........+.+.+.+.+|||||+.|+..+.   +..|.+||+.+           ++. +.+..+.+.+.
T Consensus       182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~-----------g~~-~~l~~~~g~~~  249 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLET-----------GQR-ELVGNFPGMTF  249 (435)
T ss_pred             eEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCC-----------CcE-EEeecCCCccc
Confidence            3788999855443333334468999999999999988764   46799999987           332 34555666678


Q ss_pred             hhhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        154 DIALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      ..+|+ |+++.|++... ++.  ..|                 .+||+       .++... +.     .+  .......
T Consensus       250 ~~~~S-PDG~~la~~~~~~g~--~~I-----------------y~~d~-------~~~~~~~Lt-----~~--~~~~~~~  295 (435)
T PRK05137        250 APRFS-PDGRKVVMSLSQGGN--TDI-----------------YTMDL-------RSGTTTRLT-----DS--PAIDTSP  295 (435)
T ss_pred             CcEEC-CCCCEEEEEEecCCC--ceE-----------------EEEEC-------CCCceEEcc-----CC--CCccCce
Confidence            88999 67777765433 222  235                 56677       666555 55     56  5556677


Q ss_pred             eccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        232 ERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                         .|+|||++++..+. ++.                                           ..|+++|+.++...  
T Consensus       296 ---~~spDG~~i~f~s~~~g~-------------------------------------------~~Iy~~d~~g~~~~--  327 (435)
T PRK05137        296 ---SYSPDGSQIVFESDRSGS-------------------------------------------PQLYVMNADGSNPR--  327 (435)
T ss_pred             ---eEcCCCCEEEEEECCCCC-------------------------------------------CeEEEEECCCCCeE--
Confidence               89999998886543 221                                           13445555443321  


Q ss_pred             eecccccccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        311 VLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                          .+..+...+....|+|||+.|+....++   .|.+||+. +.. ...+                            
T Consensus       328 ----~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~-~~~-~~~l----------------------------  373 (435)
T PRK05137        328 ----RISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD-GSG-ERIL----------------------------  373 (435)
T ss_pred             ----EeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC-CCc-eEec----------------------------
Confidence                1111233456678999999998876432   34455543 111 0100                            


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC------CcEEEEECCCceeeeEeecCCcceEEEE
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD------ATIKLWCLTDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~v~~~~  461 (537)
                          ... .                 .+....|+|||+.|+..+.+      ..+.++|+..+.. ..+. ..+.+...+
T Consensus       374 ----t~~-~-----------------~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~~p~  429 (435)
T PRK05137        374 ----TSG-F-----------------LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDASDPA  429 (435)
T ss_pred             ----cCC-C-----------------CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCccCcc
Confidence                000 0                 23446789999888775543      2578888866544 3444 244567778


Q ss_pred             EecC
Q psy10942        462 FINK  465 (537)
Q Consensus       462 ~s~~  465 (537)
                      |+|-
T Consensus       430 Wsp~  433 (435)
T PRK05137        430 WSPL  433 (435)
T ss_pred             cCCC
Confidence            8763

>KOG2321|consensus

Probab=99.50  E-value=2.5e-12  Score=117.10  Aligned_cols=276  Identities=11%  Similarity=0.112  Sum_probs=183.0

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      +.-.+++|.....|++||+....+-..-... +.|.-.-+|.|-..++.-..|.+|.+...-+           ......
T Consensus        63 GqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G-----------~hy~~R  131 (703)
T KOG2321|consen   63 GQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG-----------RHYRTR  131 (703)
T ss_pred             CcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcC-----------eeeeee
Confidence            4445667778899999999876553333322 4566666677877888888888887765443           222222


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +.   ..-..|+++.+.-..++++++..     |                 .-+++       +.++.+  +.     ..
T Consensus       132 IP---~~GRDm~y~~~scDly~~gsg~e-----v-----------------YRlNL-------EqGrfL~P~~-----~~  174 (703)
T KOG2321|consen  132 IP---KFGRDMKYHKPSCDLYLVGSGSE-----V-----------------YRLNL-------EQGRFLNPFE-----TD  174 (703)
T ss_pred             cC---cCCccccccCCCccEEEeecCcc-----e-----------------EEEEc-------cccccccccc-----cc
Confidence            22   12356777755555555555433     5                 55577       777766  44     44


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        .+.+.++   ..++...+|++|+.+|.+.  .||.+....                                +...++
T Consensus       175 --~~~lN~v---~in~~hgLla~Gt~~g~VE--fwDpR~ksr--------------------------------v~~l~~  215 (703)
T KOG2321|consen  175 --SGELNVV---SINEEHGLLACGTEDGVVE--FWDPRDKSR--------------------------------VGTLDA  215 (703)
T ss_pred             --cccceee---eecCccceEEecccCceEE--Eecchhhhh--------------------------------heeeec
Confidence              6788888   8899999999999999999  999887321                                111122


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                      ...-.     ..........|+++.|+.+|-.+++|+.+|.+.|||++. .+++..- .|..                  
T Consensus       216 ~~~v~-----s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa-~~pl~~k-dh~~------------------  270 (703)
T KOG2321|consen  216 ASSVN-----SHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRA-SKPLLVK-DHGY------------------  270 (703)
T ss_pred             ccccC-----CCccccccCcceEEEecCCceeEEeeccCCcEEEEEccc-CCceeec-ccCC------------------
Confidence            22100     011112234599999999999999999999999999993 3332211 1110                  


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRC  460 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~  460 (537)
                                  ..                 +|..+.|.+.  +..+++. ....++|||-.+|+....+.. ...++.+
T Consensus       271 ------------e~-----------------pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~  319 (703)
T KOG2321|consen  271 ------------EL-----------------PIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDF  319 (703)
T ss_pred             ------------cc-----------------ceeeecccccCCCceEEec-chHHhhhcccccCCceeeccc-cCCcCce
Confidence                        01                 5666666554  3445554 346899999999999988885 4559999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECC
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ++-|++.+++++-.+..+..|=+.
T Consensus       320 C~~p~sGm~f~Ane~~~m~~yyiP  343 (703)
T KOG2321|consen  320 CFVPGSGMFFTANESSKMHTYYIP  343 (703)
T ss_pred             eeecCCceEEEecCCCcceeEEcc
Confidence            999999999999888776665443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.49  E-value=4.8e-12  Score=106.47  Aligned_cols=117  Identities=18%  Similarity=0.277  Sum_probs=89.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        320 EKDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      .++|.+++|+|+|+.|++..  .++.|.+||++  .+.+..+..  .                                 
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~--~~~i~~~~~--~---------------------------------  101 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK--GKKIFSFGT--Q---------------------------------  101 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc--ccEeEeecC--C---------------------------------
Confidence            45699999999999876653  45678888886  222222211  1                                 


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                                      .+..+.|+|+|++|++++.   .|.|.+||.++.+.+...+ |. .++.++|+|||++|++++.
T Consensus       102 ----------------~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t  163 (194)
T PF08662_consen  102 ----------------PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATT  163 (194)
T ss_pred             ----------------CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEe
Confidence                            5677999999999999874   4679999999988888776 33 4789999999999998874


Q ss_pred             ------CCcEEEEECCCCeeEEEe
Q psy10942        475 ------DGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       475 ------dg~v~vwd~~~~~~~~~~  492 (537)
                            |+.++||+. +|+++...
T Consensus       164 ~~r~~~dng~~Iw~~-~G~~l~~~  186 (194)
T PF08662_consen  164 SPRLRVDNGFKIWSF-QGRLLYKK  186 (194)
T ss_pred             ccceeccccEEEEEe-cCeEeEec
Confidence                  788999998 57766554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.47  E-value=5.6e-10  Score=101.09  Aligned_cols=292  Identities=9%  Similarity=0.005  Sum_probs=179.9

Q ss_pred             ccCCcceEEEecCc-----ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEE-eC---------cc
Q psy10942         12 PQITSEFSVHCGRD-----KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLA-GG---------EK   76 (537)
Q Consensus        12 ~~~~~~~l~s~~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~   76 (537)
                      |..++++++.....     +.|.+.|.++++.+..++.......   +.+|        +++.+++ .+         .+
T Consensus         8 ~~~~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~---~~sp--------Dg~~lyva~~~~~R~~~G~~~   76 (352)
T TIGR02658         8 PASDARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP---VVAS--------DGSFFAHASTVYSRIARGKRT   76 (352)
T ss_pred             CCCCCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCce---eECC--------CCCEEEEEeccccccccCCCC
Confidence            33355666665443     8899999999999999986554443   2466        4444444 44         57


Q ss_pred             ceEEeeeccceehhhhcCCCcc--------eEEEEEeccccEEEEEe-C-CceEEEEecccccCcccccccccceeEEee
Q psy10942         77 SLLHYYETSAVKELYQHGLSSP--------LVRIVRSSVKRMYAVVT-A-DHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~--------v~~~~~s~~~~~la~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      ..|.+||+.+++.+.++.....        ...+++||||++|++.. . +..|.+.|+.+           .+.+.++.
T Consensus        77 d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~-----------~kvv~ei~  145 (352)
T TIGR02658        77 DYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG-----------KAFVRMMD  145 (352)
T ss_pred             CEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCC-----------CcEEEEEe
Confidence            8899999999999988886433        34889999999998876 3 68899999999           67776665


Q ss_pred             cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELK  226 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~  226 (537)
                      -            ++...++. +....    .                                                
T Consensus       146 v------------p~~~~vy~-t~e~~----~------------------------------------------------  160 (352)
T TIGR02658       146 V------------PDCYHIFP-TANDT----F------------------------------------------------  160 (352)
T ss_pred             C------------CCCcEEEE-ecCCc----c------------------------------------------------
Confidence            3            33333322 22111    0                                                


Q ss_pred             eEEEEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        227 TVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                      .+       .+.||..+. +-..+|...  .                                      .+..+++.+..
T Consensus       161 ~~-------~~~Dg~~~~v~~d~~g~~~--~--------------------------------------~~~~vf~~~~~  193 (352)
T TIGR02658       161 FM-------HCRDGSLAKVGYGTKGNPK--I--------------------------------------KPTEVFHPEDE  193 (352)
T ss_pred             EE-------EeecCceEEEEecCCCceE--E--------------------------------------eeeeeecCCcc
Confidence            01       122333322 111122211  0                                      01222222110


Q ss_pred             ceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                       .        +..  .+    .|.+ +|+++.+... |.|.+.|+.... .....                   .|.+-+
T Consensus       194 -~--------v~~--rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~-~~~~~-------------------~~~~~~  237 (352)
T TIGR02658       194 -Y--------LIN--HP----AYSNKSGRLVWPTYT-GKIFQIDLSSGD-AKFLP-------------------AIEAFT  237 (352)
T ss_pred             -c--------ccc--CC----ceEcCCCcEEEEecC-CeEEEEecCCCc-ceecc-------------------eeeecc
Confidence             0        001  11    3455 7877777666 999999976221 11100                   010000


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe----------CCCcEEEEECCCceeeeEeecCC
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS----------GDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                      ...           ..-.|.|.       ++.-++++|+++.+.+..          ..+.|.++|..+++.+..+.. .
T Consensus       238 ~~~-----------~~~~wrP~-------g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G  298 (352)
T TIGR02658       238 EAE-----------KADGWRPG-------GWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-G  298 (352)
T ss_pred             ccc-----------cccccCCC-------cceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-C
Confidence            000           00012222       344488999988887743          125799999999999998874 4


Q ss_pred             cceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEe
Q psy10942        455 ASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       455 ~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~  492 (537)
                      ..+..++++||++ +|++.. .++.|.++|..+++.++.+
T Consensus       299 ~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       299 HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            5789999999999 887666 5788999999999999887

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.46  E-value=4.1e-10  Score=100.69  Aligned_cols=165  Identities=11%  Similarity=0.015  Sum_probs=121.0

Q ss_pred             CCCEEEEEeCCCcEEEEEccCC-------ceeeEEEEecCCCCEEEEEcCCC-cEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        331 NDKLLASGSLDKTVKVWSTTGG-------LKLLNVLRGHKKGTQIVSTGADG-LLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       331 ~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      +|.+++..+. |...+.+...+       ..-++-.....+++-++.|..|| .+-++|..+++.......-.       
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg-------  402 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLG-------  402 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCCCeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCcc-------
Confidence            6778887776 55666655421       11133333444566888899988 89999999887544433322       


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC----cE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG----LL  478 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----~v  478 (537)
                                 .|.++..+|+|++++++.....|.+.|+.+++....-+...+-|+.+.|||+++++|-+--+|    .|
T Consensus       403 -----------~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~I  471 (668)
T COG4946         403 -----------NIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSI  471 (668)
T ss_pred             -----------ceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeE
Confidence                       788899999999999999999999999999987766666677899999999999999886665    58


Q ss_pred             EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      +++|+..++....... ...-           .+-   +|.||+++|.--+
T Consensus       472 klydm~~~Kiy~vTT~-ta~D-----------fsP---aFD~d~ryLYfLs  507 (668)
T COG4946         472 KLYDMDGGKIYDVTTP-TAYD-----------FSP---AFDPDGRYLYFLS  507 (668)
T ss_pred             EEEecCCCeEEEecCC-cccc-----------cCc---ccCCCCcEEEEEe
Confidence            9999988876654322 1111           455   9999999887543

>KOG2314|consensus

Probab=99.46  E-value=4.7e-11  Score=108.60  Aligned_cols=343  Identities=11%  Similarity=0.095  Sum_probs=196.4

Q ss_pred             EEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEecc
Q psy10942         28 LFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSV  107 (537)
Q Consensus        28 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~  107 (537)
                      ...|+...... ..+...+.-+.--+.++|        .+.||++-...| |.+|--++-..++++.+ ..|.-+.|||+
T Consensus       192 svfwN~~~n~p-~~ie~RenWTetyv~wSP--------~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~H-p~Vq~idfSP~  260 (698)
T KOG2314|consen  192 SVFWNSKFNEP-SLIEERENWTETYVRWSP--------KGTYLVTFHKQG-IALWGGESFDRIQRFYH-PGVQFIDFSPN  260 (698)
T ss_pred             EEEccccCCch-hhhhhhhcceeeeEEecC--------CceEEEEEeccc-eeeecCccHHHHHhccC-CCceeeecCCc
Confidence            44577544321 122223333333346788        678999998666 89998777777777776 56899999999


Q ss_pred             ccEEEEEeC-----------CceEEEEecccccCcccccccccceeEEeecchh--hh-hhhhcccCCCccEEEeeeccc
Q psy10942        108 KRMYAVVTA-----------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSD--EI-LDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       108 ~~~la~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~v-~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      .+||++-+.           ...++|||+.+           +.+.+.+....+  .+ .-..|| .|+.+++--+.+. 
T Consensus       261 EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t-----------G~lkrsF~~~~~~~~~WP~frWS-~DdKy~Arm~~~s-  327 (698)
T KOG2314|consen  261 EKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT-----------GLLKRSFPVIKSPYLKWPIFRWS-HDDKYFARMTGNS-  327 (698)
T ss_pred             cceEEEecCCccccCcccCCCceEEEEEccc-----------cchhcceeccCCCccccceEEec-cCCceeEEeccce-
Confidence            999999764           24699999999           566666665222  12 234688 7888887655543 


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                          |                 .|++.       .....+ .+    .-.  ...|...   .|+|.++.||        
T Consensus       328 ----i-----------------sIyEt-------psf~lld~K----slk--i~gIr~F---swsP~~~llA--------  362 (698)
T KOG2314|consen  328 ----I-----------------SIYET-------PSFMLLDKK----SLK--ISGIRDF---SWSPTSNLLA--------  362 (698)
T ss_pred             ----E-----------------EEEec-------Cceeeeccc----ccC--CccccCc---ccCCCcceEE--------
Confidence                6                 67766       443333 11    011  4567777   9999987777        


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                         .|.......+.                             .+.+-.+.+++.+.     ...-|.-.=..+.|-.+|
T Consensus       363 ---Ywtpe~~~~pa-----------------------------rvtL~evPs~~~iR-----t~nlfnVsDckLhWQk~g  405 (698)
T KOG2314|consen  363 ---YWTPETNNIPA-----------------------------RVTLMEVPSKREIR-----TKNLFNVSDCKLHWQKSG  405 (698)
T ss_pred             ---EEcccccCCcc-----------------------------eEEEEecCccceee-----eccceeeeccEEEeccCC
Confidence               66655533221                             22233333332211     111111111335566667


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      .+|+.--. .      .. ..+               +.+.-..+.|+.++....         ++..+.+..       
T Consensus       406 dyLcvkvd-R------~t-K~~---------------~~g~f~n~eIfrireKdI---------pve~velke-------  446 (698)
T KOG2314|consen  406 DYLCVKVD-R------HT-KSK---------------VKGQFSNLEIFRIREKDI---------PVEVVELKE-------  446 (698)
T ss_pred             cEEEEEEE-e------ec-ccc---------------ccceEeeEEEEEeeccCC---------Cceeeecch-------
Confidence            76665211 0      00 000               000001122333332211         111111110       


Q ss_pred             eeeeEEEEcCCCCEEEEEeC---CCcEEEEECCC----ceeeeEeecCCcceEEEEEecCCCEEEEEe---CCCcEEEEE
Q psy10942        413 GGVWFVNFSPLDRILISSSG---DATIKLWCLTD----YVCLKSLEGHDASVLRCHFINKGTQIVSTG---ADGLLKLWS  482 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~---~dg~v~vwd  482 (537)
                       .+...+|-|.|..+++-+.   ..++.+|..++    .+++..+..  ...+.+.|+|.|++++.+.   ..|.+.++|
T Consensus       447 -~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D  523 (698)
T KOG2314|consen  447 -SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYD  523 (698)
T ss_pred             -heeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEe
Confidence             5677788888877766554   35788888763    233444432  4568899999999998764   468899999


Q ss_pred             CCCCeeEEEe-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        483 IKTSTCVSTF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       483 ~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      +....+...- ..|. ..           +.+   .|.|.|+|+++++.-..
T Consensus       524 ~~~a~~k~~~~~eh~-~a-----------t~v---eWDPtGRYvvT~ss~wr  560 (698)
T KOG2314|consen  524 TDYADLKDTASPEHF-AA-----------TEV---EWDPTGRYVVTSSSSWR  560 (698)
T ss_pred             cchhhhhhccCcccc-cc-----------ccc---eECCCCCEEEEeeehhh
Confidence            8743332221 1222 22           556   99999999999876443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=3e-11  Score=116.05  Aligned_cols=197  Identities=12%  Similarity=0.055  Sum_probs=123.8

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCcee-eE-------EEEecC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKL-LN-------VLRGHK  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~-~~-------~~~~~~  363 (537)
                      ..|.++|.....      ...+..+...+.+.+|+|||+.|+..+.+   ..|++||+..+... +.       ....++
T Consensus       176 ~~L~~~D~dG~~------~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SP  249 (427)
T PRK02889        176 YQLQISDADGQN------AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSP  249 (427)
T ss_pred             cEEEEECCCCCC------ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECC
Confidence            467777875543      22234566788999999999999887643   35999999733221 11       234456


Q ss_pred             CCCEEE-EEcCCCcEEEEE--CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEE
Q psy10942        364 KGTQIV-STGADGLLKLWS--IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLW  439 (537)
Q Consensus       364 ~~~~l~-~~~~d~~i~i~d--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~  439 (537)
                      ++..++ +.+.++...+|.  +..+. ...+..+..                 ......|+|||+.|+..+. +|...+|
T Consensus       250 DG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~-----------------~~~~~~wSpDG~~l~f~s~~~g~~~Iy  311 (427)
T PRK02889        250 DGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSG-----------------IDTEPFFSPDGRSIYFTSDRGGAPQIY  311 (427)
T ss_pred             CCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCC-----------------CCcCeEEcCCCCEEEEEecCCCCcEEE
Confidence            777775 566777766664  44433 233322221                 2345679999998876654 4555666


Q ss_pred             E--CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        440 C--LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       440 d--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      .  +.+++.. .+..+........|+|||++|+..+.++   .|.+||+.+++... +... ...           ... 
T Consensus       312 ~~~~~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~-----------~~p-  376 (427)
T PRK02889        312 RMPASGGAAQ-RVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRD-----------ESP-  376 (427)
T ss_pred             EEECCCCceE-EEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCc-----------cCc-
Confidence            4  4444332 2222223345688999999999877654   59999998876543 3222 223           556 


Q ss_pred             ceeeecCCCEEEEEeCCC
Q psy10942        515 RQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~dg  532 (537)
                        .|+|||+.|+.++.++
T Consensus       377 --~~spdg~~l~~~~~~~  392 (427)
T PRK02889        377 --SFAPNGRYILYATQQG  392 (427)
T ss_pred             --eECCCCCEEEEEEecC
Confidence              9999999988776544

>KOG0974|consensus

Probab=99.45  E-value=4.3e-12  Score=123.74  Aligned_cols=183  Identities=19%  Similarity=0.295  Sum_probs=147.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE--------------EEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV--------------LRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------------~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      ...|....+..+.+.++.++.++.+.+||... ......              .....+.-++++|+.-+.|.+|+....
T Consensus        87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~-~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d  165 (967)
T KOG0974|consen   87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKN-SSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED  165 (967)
T ss_pred             cccccccchhhhcceEEEEEcCceEEEEeccc-CceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc
Confidence            34455566667788899999999999999873 222211              122234567888999999999998844


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee-EeecCCcceEEEEEec
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK-SLEGHDASVLRCHFIN  464 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~  464 (537)
                      +....+.+|.+                 .|.++.++.||+++++.+.|.++++|++.+.+... ..-+|...|..++|.|
T Consensus       166 n~p~~l~GHeG-----------------~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~  228 (967)
T KOG0974|consen  166 NKPIRLKGHEG-----------------SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLP  228 (967)
T ss_pred             CCcceecccCC-----------------ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEecc
Confidence            44445667766                 78888999999999999999999999999987766 6678999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc-ceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL-KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +  .+++++.|.+.++|+. +++.+..+.+|.. .+           +.+   +..++...++|++.|+.+++|
T Consensus       229 n--~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~i-----------w~~---~~~~~~~~~vT~g~Ds~lk~~  285 (967)
T KOG0974|consen  229 N--RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGI-----------WKI---AVPIGVIIKVTGGNDSTLKLW  285 (967)
T ss_pred             c--eeEEeccceEEEEEec-ccceehhhhhhhhcce-----------eEE---EEcCCceEEEeeccCcchhhh
Confidence            8  9999999999999976 5667778888865 45           777   999999999999999999987

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.44  E-value=4.9e-11  Score=107.42  Aligned_cols=346  Identities=11%  Similarity=0.034  Sum_probs=204.5

Q ss_pred             EEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEecc
Q psy10942         29 FTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSV  107 (537)
Q Consensus        29 ~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~  107 (537)
                      .+|+-.+...-..+. ...+....  .++|        .+.+++.....| |.+|.-+.+..+.++.+ ..|..+.|||.
T Consensus        15 ~f~~~~s~~~~~~~~~~~~p~~~~--~~SP--------~G~~l~~~~~~~-V~~~~g~~~~~l~~~~~-~~V~~~~fSP~   82 (561)
T COG5354          15 VFWNSQSEVIHTRFESENWPVAYV--SESP--------LGTYLFSEHAAG-VECWGGPSKAKLVRFRH-PDVKYLDFSPN   82 (561)
T ss_pred             EeecCccccccccccccCcchhhe--eecC--------cchheehhhccc-eEEccccchhheeeeec-CCceecccCcc
Confidence            446666655444444 34455555  6788        778888887666 89999888776666554 67999999999


Q ss_pred             ccEEEEEeCC---------------ceEEEEecccccCcccccccccceeEEeecchhh--hh-hhhcccCCCccEEEee
Q psy10942        108 KRMYAVVTAD---------------HNISLYRLNSETGLEERPNKILKFRKQFVGFSDE--IL-DIALLGEEDSHIVVAS  169 (537)
Q Consensus       108 ~~~la~~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~~l~~~~  169 (537)
                      ++||.+-+..               +.+.+||..+           +.++..+.+-..+  .. -+.|+ -++.+.+-..
T Consensus        83 ~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~s-----------g~iv~sf~~~~q~~~~Wp~~k~s-~~D~y~ARvv  150 (561)
T COG5354          83 EKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIAS-----------GMIVFSFNGISQPYLGWPVLKFS-IDDKYVARVV  150 (561)
T ss_pred             cceeeeeccCCccChhhccCCccccCceeEEeccC-----------ceeEeeccccCCcccccceeeee-ecchhhhhhc
Confidence            9999987653               3489999999           6777777765544  22 45566 5555554332


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                      ++ +    +                 .++++  .    ...... ++     .- ....|...   .++|.++       
T Consensus       151 ~~-s----l-----------------~i~e~--t----~n~~~~p~~-----~l-r~~gi~dF---sisP~~n-------  186 (561)
T COG5354         151 GS-S----L-----------------YIHEI--T----DNIEEHPFK-----NL-RPVGILDF---SISPEGN-------  186 (561)
T ss_pred             cC-e----E-----------------EEEec--C----CccccCchh-----hc-cccceeeE---EecCCCC-------
Confidence            22 2    4                 44443  0    111111 11     10 02446666   7777652       


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      ...+.  .|-.....                             ..+++++|.+..+..+...   .+.  ...=..+.|
T Consensus       187 ~~~la--~~tPEk~~-----------------------------kpa~~~i~sIp~~s~l~tk---~lf--k~~~~qLkW  230 (561)
T COG5354         187 HDELA--YWTPEKLN-----------------------------KPAMVRILSIPKNSVLVTK---NLF--KVSGVQLKW  230 (561)
T ss_pred             CceEE--EEccccCC-----------------------------CCcEEEEEEccCCCeeeee---eeE--eecccEEEE
Confidence            12245  77666532                             2467788887754432211   111  111245778


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      .+.|++|++--..      +.....            .+    -.+..+.+++++........ ...+            
T Consensus       231 ~~~g~~ll~l~~t------~~ksnK------------sy----fgesnLyl~~~~e~~i~V~~-~~~~------------  275 (561)
T COG5354         231 QVLGKYLLVLVMT------HTKSNK------------SY----FGESNLYLLRITERSIPVEK-DLKD------------  275 (561)
T ss_pred             ecCCceEEEEEEE------eeeccc------------ce----eccceEEEEeecccccceec-cccc------------
Confidence            8888776653210      110000            00    01223445554422211111 1122            


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEEC
Q psy10942        409 QIITGGVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSI  483 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~  483 (537)
                           +|...+|.|.++.+++.+  .+..+.++|++.. ....+  ....=+.+.|+|.+++++.++-|   |.+-+||.
T Consensus       276 -----pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~  347 (561)
T COG5354         276 -----PVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDP  347 (561)
T ss_pred             -----cceeeeecccCCceeEEecccccceeecccccc-eEEec--CCcccccccccCcccEEEEecCCccccceEEecc
Confidence                 778888888887766654  6778999999875 33333  34455678999999999998876   67999998


Q ss_pred             CCCeeEE-EecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC------CCCEEeC
Q psy10942        484 KTSTCVS-TFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW------SPQVVVY  537 (537)
Q Consensus       484 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~------dg~i~vW  537 (537)
                      ....... .+.+...             +-+   .|+||++++.+...      |..|+||
T Consensus       348 ~~rf~~~~~~~~~n~-------------s~~---~wspd~qF~~~~~ts~k~~~Dn~i~l~  392 (561)
T COG5354         348 AGRFKVAGAFNGLNT-------------SYC---DWSPDGQFYDTDTTSEKLRVDNSIKLW  392 (561)
T ss_pred             CCceEEEEEeecCCc-------------eEe---eccCCceEEEecCCCcccccCcceEEE
Confidence            7665444 5555443             234   89999999987644      5567666

>KOG1354|consensus

Probab=99.42  E-value=3.5e-12  Score=108.87  Aligned_cols=284  Identities=10%  Similarity=0.089  Sum_probs=165.7

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccce----e-ee-------------eccccccceeeeEeecCccccccC
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ----L-RS-------------YPAYESLETCAVFHLSDETESKSG   65 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~----~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~   65 (537)
                      -|+++.|.  ..|++|+||..+|.|.++.-+....    . ..             +...|.+..+  .+++.+      
T Consensus        27 iis~vef~--~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkI--rw~~~~------   96 (433)
T KOG1354|consen   27 IISAVEFD--HYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKI--RWLDDG------   96 (433)
T ss_pred             ceeeEEee--cccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhc--eecCCC------
Confidence            47889999  9999999999999999986432211    1 11             1233444445  556543      


Q ss_pred             CcEEEEEeCccceEEeeeccceehhhh---cC---CCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQ---HG---LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~---~~---~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                      +...++..+.|.+|++|.+........   +.   ..+.++++..      .+.+..|-.+.                 .
T Consensus        97 n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~------p~~~~~~~~ve-----------------a  153 (433)
T KOG1354|consen   97 NLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL------PVEGRHDLEVE-----------------A  153 (433)
T ss_pred             CccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeec------eeeccccceee-----------------e
Confidence            666777777799999998764322210   00   0112222221      11111111000                 1


Q ss_pred             ceeEEe-ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccc
Q psy10942        140 KFRKQF-VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNT  217 (537)
Q Consensus       140 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~  217 (537)
                      .+.+.+ ..|.--|+++.++ .|...++++..-+     |                 .+|++.   ...+....+ +++.
T Consensus       154 ~prRv~aNaHtyhiNSIS~N-sD~Et~lSADdLR-----I-----------------NLWnle---i~d~sFnIVDIKP~  207 (433)
T KOG1354|consen  154 SPRRVYANAHTYHINSISVN-SDKETFLSADDLR-----I-----------------NLWNLE---IIDQSFNIVDIKPA  207 (433)
T ss_pred             eeeeeccccceeEeeeeeec-CccceEeecccee-----e-----------------eecccc---ccCCceeEEEcccc
Confidence            112222 3466668999998 6666665554333     7                 889881   111112222 3311


Q ss_pred             ccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                      ....-  ..-|++.   .|+|.. +.++..+..|+|+  +-|++..   ..|                         |..
T Consensus       208 nmEeL--teVITsa---EFhp~~cn~f~YSSSKGtIr--LcDmR~~---aLC-------------------------d~h  252 (433)
T KOG1354|consen  208 NMEEL--TEVITSA---EFHPHHCNVFVYSSSKGTIR--LCDMRQS---ALC-------------------------DAH  252 (433)
T ss_pred             CHHHH--HHHHhhh---ccCHhHccEEEEecCCCcEE--Eeechhh---hhh-------------------------cch
Confidence            12222  4456777   788753 5677777778888  8777752   111                         111


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC------------
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK------------  364 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------  364 (537)
                      -+++........    ...+.+--..|..+.|+++|+++++-.. -+|++||+....+++.++..|..            
T Consensus       253 sKlfEepedp~~----rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD  327 (433)
T KOG1354|consen  253 SKLFEEPEDPSS----RSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYEND  327 (433)
T ss_pred             hhhhccccCCcc----hhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhcc
Confidence            122221111000    1223334467899999999999998543 68999999878888888888752            


Q ss_pred             -------------CCEEEEEcCCCcEEEEECCCCe
Q psy10942        365 -------------GTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       365 -------------~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                                   +.++++|+..+..++++...|.
T Consensus       328 ~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  328 AIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             chhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence                         5589999999999999976553

>KOG2314|consensus

Probab=99.42  E-value=7.6e-11  Score=107.26  Aligned_cols=332  Identities=11%  Similarity=0.084  Sum_probs=193.7

Q ss_pred             eeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc----------
Q psy10942          6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE----------   75 (537)
Q Consensus         6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   75 (537)
                      |-+.||  |-|.||+|--.-| |.+|--++...++.+.|. .+.-+  -++|        +.+||+|-+.          
T Consensus       214 tyv~wS--P~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp-~Vq~i--dfSP--------~EkYLVT~s~~p~~~~~~d~  279 (698)
T KOG2314|consen  214 TYVRWS--PKGTYLVTFHKQG-IALWGGESFDRIQRFYHP-GVQFI--DFSP--------NEKYLVTYSPEPIIVEEDDN  279 (698)
T ss_pred             eeEEec--CCceEEEEEeccc-eeeecCccHHHHHhccCC-Cceee--ecCC--------ccceEEEecCCccccCcccC
Confidence            457889  8999999999888 999999998888887643 23334  3477        7789998653          


Q ss_pred             -cceEEeeeccceehhhhcCCC----cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh
Q psy10942         76 -KSLLHYYETSAVKELYQHGLS----SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD  150 (537)
Q Consensus        76 -~~~i~~wd~~~~~~~~~~~~~----~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (537)
                       ...++|||+.+|...+.+...    -.-.-+.||.|++|+|--.. ..|.||+...           ..++..-.-.-.
T Consensus       280 e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtps-----------f~lld~Kslki~  347 (698)
T KOG2314|consen  280 EGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPS-----------FMLLDKKSLKIS  347 (698)
T ss_pred             CCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCc-----------eeeecccccCCc
Confidence             256999999999998887763    13345689999999998777 5689998776           444332222334


Q ss_pred             hhhhhhcccCCCccEEEeeeccc-cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEE
Q psy10942        151 EILDIALLGEEDSHIVVASNEYL-NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVT  229 (537)
Q Consensus       151 ~v~~~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~  229 (537)
                      .|....|+ |.++.|+.-+...+ .+.++                 .+-.+       .+.+.+ +.  ..-|  .-.=.
T Consensus       348 gIr~Fsws-P~~~llAYwtpe~~~~parv-----------------tL~ev-------Ps~~~i-Rt--~nlf--nVsDc  397 (698)
T KOG2314|consen  348 GIRDFSWS-PTSNLLAYWTPETNNIPARV-----------------TLMEV-------PSKREI-RT--KNLF--NVSDC  397 (698)
T ss_pred             cccCcccC-CCcceEEEEcccccCCcceE-----------------EEEec-------Ccccee-ee--ccce--eeecc
Confidence            58889999 56666655443222 00111                 11122       111111 10  0001  11111


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      .+   .|-.+|.+|+.--         =+                     |+...     +.+.-..+.|+.++......
T Consensus       398 kL---hWQk~gdyLcvkv---------dR---------------------~tK~~-----~~g~f~n~eIfrireKdIpv  439 (698)
T KOG2314|consen  398 KL---HWQKSGDYLCVKV---------DR---------------------HTKSK-----VKGQFSNLEIFRIREKDIPV  439 (698)
T ss_pred             EE---EeccCCcEEEEEE---------Ee---------------------ecccc-----ccceEeeEEEEEeeccCCCc
Confidence            22   3445555554211         00                     00000     01111245666666554322


Q ss_pred             eeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        310 NVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      ..     -.-...|...+|-|.|+.+++-+.+   .++.+|.++...                             ....
T Consensus       440 e~-----velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~-----------------------------~~~~  485 (698)
T KOG2314|consen  440 EV-----VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNI-----------------------------KKPS  485 (698)
T ss_pred             ee-----eecchheeeeeeccCCCeEEEEEccccccceeEEEeecCC-----------------------------Cchh
Confidence            11     2335678899999999988876543   334444444100                             0011


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe---CCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS---GDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                      .+..+...                   ..+.+.|+|.|++++.+.   ..|.+.++|+........-.......+.+.|.
T Consensus       486 lVk~~dk~-------------------~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWD  546 (698)
T KOG2314|consen  486 LVKELDKK-------------------FANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWD  546 (698)
T ss_pred             hhhhhccc-------------------ccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceEC
Confidence            12222110                   566788999999888764   56899999987422222221122346889999


Q ss_pred             cCCCEEEEEeC------CCcEEEEECC
Q psy10942        464 NKGTQIVSTGA------DGLLKLWSIK  484 (537)
Q Consensus       464 ~~~~~l~s~~~------dg~v~vwd~~  484 (537)
                      |.|+|+++++.      |.--++|+++
T Consensus       547 PtGRYvvT~ss~wrhk~d~GYri~tfq  573 (698)
T KOG2314|consen  547 PTGRYVVTSSSSWRHKVDNGYRIFTFQ  573 (698)
T ss_pred             CCCCEEEEeeehhhhccccceEEEEee
Confidence            99999999986      3445666653

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.39  E-value=1.7e-11  Score=118.79  Aligned_cols=176  Identities=13%  Similarity=0.025  Sum_probs=108.6

Q ss_pred             ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                      ..|.++|...............+...+|||||++||.+..+   ..|++||+.+           ++. ..+..+...+.
T Consensus       170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~-----------g~~-~~~~~~~~~~~  237 (417)
T TIGR02800       170 YELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLAT-----------GQR-EKVASFPGMNG  237 (417)
T ss_pred             ceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCC-----------CCE-EEeecCCCCcc
Confidence            35888887644433333344578899999999999987653   4799999987           332 23344555567


Q ss_pred             hhhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        154 DIALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      +++|+ ++++.|++... ++.  ..|                 .+||+       .++... +.     .+  .......
T Consensus       238 ~~~~s-pDg~~l~~~~~~~~~--~~i-----------------~~~d~-------~~~~~~~l~-----~~--~~~~~~~  283 (417)
T TIGR02800       238 APAFS-PDGSKLAVSLSKDGN--PDI-----------------YVMDL-------DGKQLTRLT-----NG--PGIDTEP  283 (417)
T ss_pred             ceEEC-CCCCEEEEEECCCCC--ccE-----------------EEEEC-------CCCCEEECC-----CC--CCCCCCE
Confidence            78999 67776665432 222  336                 66777       555444 44     44  4445566


Q ss_pred             eccCcccCCCeeeeccCC-CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        232 ERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                         .|+|||++|+..+.. +..                                           .|.++++.+++..  
T Consensus       284 ---~~s~dg~~l~~~s~~~g~~-------------------------------------------~iy~~d~~~~~~~--  315 (417)
T TIGR02800       284 ---SWSPDGKSIAFTSDRGGSP-------------------------------------------QIYMMDADGGEVR--  315 (417)
T ss_pred             ---EECCCCCEEEEEECCCCCc-------------------------------------------eEEEEECCCCCEE--
Confidence               789999887755432 221                                           2344444433211  


Q ss_pred             eecccccccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcc
Q psy10942        311 VLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---TVKVWSTT  350 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~i~d~~  350 (537)
                          .+..+...+..+.|+|+|++++.++.++   .|.+||+.
T Consensus       316 ----~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~  354 (417)
T TIGR02800       316 ----RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD  354 (417)
T ss_pred             ----EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence                1112234456788999999999887765   56666665

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.38  E-value=7e-11  Score=106.43  Aligned_cols=331  Identities=13%  Similarity=0.102  Sum_probs=199.9

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc-----
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS-----   77 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   77 (537)
                      +.++.+.+|  |.|.+|++....| |.+|+-.++..+..+++ ..+..+  -++|        +++||.+-...+     
T Consensus        33 ~p~~~~~~S--P~G~~l~~~~~~~-V~~~~g~~~~~l~~~~~-~~V~~~--~fSP--------~~kYL~tw~~~pi~~pe   98 (561)
T COG5354          33 WPVAYVSES--PLGTYLFSEHAAG-VECWGGPSKAKLVRFRH-PDVKYL--DFSP--------NEKYLVTWSREPIIEPE   98 (561)
T ss_pred             cchhheeec--Ccchheehhhccc-eEEccccchhheeeeec-CCceec--ccCc--------ccceeeeeccCCccChh
Confidence            457788899  8999999998888 99999988776666653 233444  3466        668888755433     


Q ss_pred             ----------eEEeeeccceehhhhcCCCc-c--eE-EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeE
Q psy10942         78 ----------LLHYYETSAVKELYQHGLSS-P--LV-RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        78 ----------~i~~wd~~~~~~~~~~~~~~-~--v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                                .+.+||..+|..+..+.... +  .. -+.|+-+.+|+|-... ..+.|+++ ++...       ....+
T Consensus        99 ~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~-~sl~i~e~-t~n~~-------~~p~~  169 (561)
T COG5354          99 IEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG-SSLYIHEI-TDNIE-------EHPFK  169 (561)
T ss_pred             hccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc-CeEEEEec-CCccc-------cCchh
Confidence                      49999999999988887653 2  33 6789999988776533 56999997 32110       11112


Q ss_pred             EeecchhhhhhhhcccC-CCccEEEeeecc-ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccc
Q psy10942        144 QFVGFSDEILDIALLGE-EDSHIVVASNEY-LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERL  220 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~  220 (537)
                      .++  ...+....|+|. +...|+.-+-.. ...+++                 ++|.+       .....+ .+  .  
T Consensus       170 ~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~-----------------~i~sI-------p~~s~l~tk--~--  219 (561)
T COG5354         170 NLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMV-----------------RILSI-------PKNSVLVTK--N--  219 (561)
T ss_pred             hcc--ccceeeEEecCCCCCceEEEEccccCCCCcEE-----------------EEEEc-------cCCCeeeee--e--
Confidence            222  234677778854 222333322221 123445                 66666       322222 11  0  


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      -.  ...=..+   .|.+.|++++.-...        +...+            .              +-.....++++
T Consensus       220 lf--k~~~~qL---kW~~~g~~ll~l~~t--------~~ksn------------K--------------syfgesnLyl~  260 (561)
T COG5354         220 LF--KVSGVQL---KWQVLGKYLLVLVMT--------HTKSN------------K--------------SYFGESNLYLL  260 (561)
T ss_pred             eE--eecccEE---EEecCCceEEEEEEE--------eeecc------------c--------------ceeccceEEEE
Confidence            00  1111234   566666665432110        11000            0              00113467788


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  378 (537)
                      ++.....      .......++|...+|.|.++.+++.+  .+..+.++|++ +. ....+...                
T Consensus       261 ~~~e~~i------~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr-~N-l~~~~Pe~----------------  316 (561)
T COG5354         261 RITERSI------PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR-GN-LRFYFPEQ----------------  316 (561)
T ss_pred             eeccccc------ceeccccccceeeeecccCCceeEEecccccceeecccc-cc-eEEecCCc----------------
Confidence            8774432      11225578999999999988777654  66778888887 21 11111110                


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeee-EeecCC
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLK-SLEGHD  454 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~-~~~~~~  454 (537)
                                                         .-..+.|+|.+++++.++-|   |.+.+||........ .+.+. 
T Consensus       317 -----------------------------------~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~-  360 (561)
T COG5354         317 -----------------------------------KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL-  360 (561)
T ss_pred             -----------------------------------ccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecC-
Confidence                                               23456789999999887654   789999987644433 56543 


Q ss_pred             cceEEEEEecCCCEEEEEeC------CCcEEEEECCCC
Q psy10942        455 ASVLRCHFINKGTQIVSTGA------DGLLKLWSIKTS  486 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~------dg~v~vwd~~~~  486 (537)
                       ...-+.|+||+.++.+...      |..+.|||+...
T Consensus       361 -n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~  397 (561)
T COG5354         361 -NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA  397 (561)
T ss_pred             -CceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence             3455789999999887653      788999998543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=4e-11  Score=116.14  Aligned_cols=230  Identities=10%  Similarity=-0.027  Sum_probs=132.5

Q ss_pred             eEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHH
Q psy10942        119 NISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTF  198 (537)
Q Consensus       119 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~w  198 (537)
                      .|.++|.++           .. .+.+..+...+...+|+ |+++.|+..+.... ...|                 .+|
T Consensus       180 ~l~~~d~~g-----------~~-~~~l~~~~~~~~~p~wS-pDG~~la~~s~~~~-~~~l-----------------~~~  228 (430)
T PRK00178        180 TLQRSDYDG-----------AR-AVTLLQSREPILSPRWS-PDGKRIAYVSFEQK-RPRI-----------------FVQ  228 (430)
T ss_pred             EEEEECCCC-----------CC-ceEEecCCCceeeeeEC-CCCCEEEEEEcCCC-CCEE-----------------EEE
Confidence            477778776           33 34555666778899999 77888876654321 1336                 777


Q ss_pred             HHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee-ccCCCcceeccccccCCCcccccccccccce
Q psy10942        199 ERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAEH  276 (537)
Q Consensus       199 d~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~  276 (537)
                      |+       .+++.. +.     ..  .+.+...   .|+|||+.|+. ...++.                         
T Consensus       229 ~l-------~~g~~~~l~-----~~--~g~~~~~---~~SpDG~~la~~~~~~g~-------------------------  266 (430)
T PRK00178        229 NL-------DTGRREQIT-----NF--EGLNGAP---AWSPDGSKLAFVLSKDGN-------------------------  266 (430)
T ss_pred             EC-------CCCCEEEcc-----CC--CCCcCCe---EECCCCCEEEEEEccCCC-------------------------
Confidence            87       666554 44     33  3445567   89999988874 333332                         


Q ss_pred             eeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEccCCc
Q psy10942        277 GAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DK--TVKVWSTTGGL  353 (537)
Q Consensus       277 ~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~--~i~i~d~~~~~  353 (537)
                                        ..|+++|+.++...      .+..+........|+|||+.++..+. ++  .|+++++. ++
T Consensus       267 ------------------~~Iy~~d~~~~~~~------~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~-~g  321 (430)
T PRK00178        267 ------------------PEIYVMDLASRQLS------RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN-GG  321 (430)
T ss_pred             ------------------ceEEEEECCCCCeE------EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC-CC
Confidence                              13445555544321      11223334456789999998876653 22  34444443 11


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                      +. ..+.                              +...                   ......|+|||++|+....+
T Consensus       322 ~~-~~lt------------------------------~~~~-------------------~~~~~~~Spdg~~i~~~~~~  351 (430)
T PRK00178        322 RA-ERVT------------------------------FVGN-------------------YNARPRLSADGKTLVMVHRQ  351 (430)
T ss_pred             CE-EEee------------------------------cCCC-------------------CccceEECCCCCEEEEEEcc
Confidence            11 1110                              0000                   12235688999888877643


Q ss_pred             -C--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCeeEEEecCCccce
Q psy10942        434 -A--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       434 -g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                       +  .|.++|+.+++... +. +........|+|||+.++..+.+   ..+.++++. +.....+..+.+.+
T Consensus       352 ~~~~~l~~~dl~tg~~~~-lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~  420 (430)
T PRK00178        352 DGNFHVAAQDLQRGSVRI-LT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEV  420 (430)
T ss_pred             CCceEEEEEECCCCCEEE-cc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCc
Confidence             2  58889998875433 32 12223356899999999877654   347777774 44445555555555

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.38  E-value=7.5e-09  Score=107.09  Aligned_cols=417  Identities=16%  Similarity=0.113  Sum_probs=218.8

Q ss_pred             eeeeeeeeccCCcceEEEecCcc--eEEEEEcCccc---eeeeeccc----cccceeeeEeecCccccccCCcEEEEEeC
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDK--VLFTWDLSSRK---QLRSYPAY----ESLETCAVFHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g--~v~iwd~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      .++..+|.+..|.-+++.+....  .|.+-......   .+..++..    ..-..+++.+++        +...++.+.
T Consensus        23 ~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~--------d~~~l~~~~   94 (928)
T PF04762_consen   23 PITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLA--------DSESLCIAL   94 (928)
T ss_pred             ccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEecc--------CCCcEEEEE
Confidence            45666777545555556654443  34444433332   22333211    122233446777        445566666


Q ss_pred             ccceEEee----eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEec----ccccCcccccccc--------
Q psy10942         75 EKSLLHYY----ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRL----NSETGLEERPNKI--------  138 (537)
Q Consensus        75 ~~~~i~~w----d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~----~~~~~~~~~~~~~--------  138 (537)
                      ++|.|.+.    +..+...-..-.....|.+++||||+..||.++.++++.+.+-    -...+........        
T Consensus        95 ~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGW  174 (928)
T PF04762_consen   95 ASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGW  174 (928)
T ss_pred             CCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeecc
Confidence            78888888    4443322222223368999999999999999999988876532    2211110000000        


Q ss_pred             cceeEEeec------------------------chhhhhhhhcccCCCccEEEeeecccc--CCcccceeecccCCCcch
Q psy10942        139 LKFRKQFVG------------------------FSDEILDIALLGEEDSHIVVASNEYLN--GGDLSGLVKLGANRSHNE  192 (537)
Q Consensus       139 ~~~~~~~~~------------------------~~~~v~~~~~~~~~~~~l~~~~~~~~~--~~~i~~~~~~~~~~~~~~  192 (537)
                      ++...+++|                        +.+.-..++|. .|+.++++.+-+...  .+.+              
T Consensus       175 GkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWR-GDG~yFAVss~~~~~~~~R~i--------------  239 (928)
T PF04762_consen  175 GKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWR-GDGEYFAVSSVEPETGSRRVI--------------  239 (928)
T ss_pred             CcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEEC-CCCcEEEEEEEEcCCCceeEE--------------
Confidence            000011111                        23334567787 788888877663331  2457              


Q ss_pred             hhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccC---CCcceeccccccCCCcccc-c
Q psy10942        193 WFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM---EPSTLEELEKRKTYHFPLF-G  268 (537)
Q Consensus       193 ~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~---d~~i~~~iw~~~~~~~~~~-~  268 (537)
                         ++|+-       + +...-...   .-  .+--.++   +|-|.|+++|+...   ...|.  +|..++...... .
T Consensus       240 ---RVy~R-------e-G~L~stSE---~v--~gLe~~l---~WrPsG~lIA~~q~~~~~~~Vv--FfErNGLrhgeF~l  298 (928)
T PF04762_consen  240 ---RVYSR-------E-GELQSTSE---PV--DGLEGAL---SWRPSGNLIASSQRLPDRHDVV--FFERNGLRHGEFTL  298 (928)
T ss_pred             ---EEECC-------C-ceEEeccc---cC--CCccCCc---cCCCCCCEEEEEEEcCCCcEEE--EEecCCcEeeeEec
Confidence               88886       4 33331100   11  2223467   99999999998654   34455  666555221111 1


Q ss_pred             cc---ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCC-CCEEEEEeCCCc
Q psy10942        269 IF---VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPN-DKLLASGSLDKT  343 (537)
Q Consensus       269 ~~---~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~d~~  343 (537)
                      .+   ......+.+..+.  ..|+....| .|.+|-..+..--.+.   .+. .....+..+.|+|. ...|...+.+|.
T Consensus       299 ~~~~~~~~v~~l~Wn~ds--~iLAv~~~~-~vqLWt~~NYHWYLKq---ei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~  372 (928)
T PF04762_consen  299 RFDPEEEKVIELAWNSDS--EILAVWLED-RVQLWTRSNYHWYLKQ---EIRFSSSESVNFVKWDPEKPLRLHVLTSNGQ  372 (928)
T ss_pred             CCCCCCceeeEEEECCCC--CEEEEEecC-CceEEEeeCCEEEEEE---EEEccCCCCCCceEECCCCCCEEEEEecCCc
Confidence            11   1112223333333  345554444 4999998876543322   222 12233555999994 456777777788


Q ss_pred             EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942        344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL  423 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~  423 (537)
                      +..++.. - .....-...+...-++..-...++.+-.++..-..     +...-..+.+.        ..|.+++|+++
T Consensus       373 ~~~~~~~-~-~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VP-----PPMs~~~l~~~--------~~v~~vaf~~~  437 (928)
T PF04762_consen  373 YEIYDFA-W-DVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVP-----PPMSSYELELP--------SPVNDVAFSPS  437 (928)
T ss_pred             EEEEEEE-E-EEEecCCCCccCceEEEEEeCCeEEEecccccCCC-----chHhceEEcCC--------CCcEEEEEeCC
Confidence            8777765 1 11111111111222333333344555554433110     00000111111        17899999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCcee--------eeEee----------cCCcceEEEEEecCCCEEEEEeCC---CcEEEEE
Q psy10942        424 DRILISSSGDATIKLWCLTDYVC--------LKSLE----------GHDASVLRCHFINKGTQIVSTGAD---GLLKLWS  482 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~----------~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd  482 (537)
                      +..+++-..||.|.+|.......        ...+.          .....+..++|..+..+++....+   ..+.+++
T Consensus       438 ~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  517 (928)
T PF04762_consen  438 NSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVD  517 (928)
T ss_pred             CCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEE
Confidence            98899999999999998543211        11111          123457888998887776666554   5688887


Q ss_pred             CCC
Q psy10942        483 IKT  485 (537)
Q Consensus       483 ~~~  485 (537)
                      ...
T Consensus       518 ~~~  520 (928)
T PF04762_consen  518 IDD  520 (928)
T ss_pred             ecc
Confidence            743

>KOG1409|consensus

Probab=99.38  E-value=1.4e-11  Score=105.26  Aligned_cols=332  Identities=14%  Similarity=0.173  Sum_probs=196.2

Q ss_pred             ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee-cchhhhhhhhcccCCCccE
Q psy10942         88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV-GFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l  165 (537)
                      ..++.++++ +.+.+...-|-..-+.+++.|.+++||--...          ++.-..+. ....+++++.+. .+...|
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds----------~q~wpsI~~~mP~~~~~~~y~-~e~~~L   83 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDS----------GQYWPSIYHYMPSPCSAMEYV-SESRRL   83 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccc----------cccCchhhhhCCCCceEeeee-ccceEE
Confidence            345566655 56777777787778999999999999954331          22222221 224457888888 666677


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      +++-..+.    +                 .-+.+  ...+ +....   ......|  ...+..+   -|+...+++++
T Consensus        84 ~vg~~ngt----v-----------------tefs~--sedf-nkm~~---~r~~~~h--~~~v~~~---if~~~~e~V~s  131 (404)
T KOG1409|consen   84 YVGQDNGT----V-----------------TEFAL--SEDF-NKMTF---LKDYLAH--QARVSAI---VFSLTHEWVLS  131 (404)
T ss_pred             EEEEecce----E-----------------EEEEh--hhhh-hhcch---hhhhhhh--hcceeeE---EecCCceeEEE
Confidence            66665554    4                 11111  0011 11111   1122278  8999999   99999999999


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeC-----CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-----GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE  320 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~  320 (537)
                      .+.|..+   .|........        +..+.....     ..+.+...|...|.|....+.......   ...+.+|.
T Consensus       132 ~~~dk~~---~~hc~e~~~~--------lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~---i~~~~~h~  197 (404)
T KOG1409|consen  132 TGKDKQF---AWHCTESGNR--------LGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQL---ITTFNGHT  197 (404)
T ss_pred             eccccce---EEEeeccCCc--------ccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCce---EEEEcCcc
Confidence            9999887   4554332111        111110000     111355566667777766655433211   44678999


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      +.+.+++|.|..+.|++|..|..+.+||+.........+.+|.+          -..+++++.||.|.+|+.+...... 
T Consensus       198 ~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~et-  276 (404)
T KOG1409|consen  198 GEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVET-  276 (404)
T ss_pred             cceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecC-
Confidence            99999999999999999999999999999855555555666654          5789999999999999987543211 


Q ss_pred             eccCCcceEEEEEecCC-CceE----------------------Eee-eeEEEEcCCCCEEEEEeCCCcEEEEE------
Q psy10942        391 FDKHALKIWTLAITKDE-NQII----------------------TGG-VWFVNFSPLDRILISSSGDATIKLWC------  440 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~-~~~~----------------------~~~-i~~~~~s~~~~~l~~~~~dg~i~i~d------  440 (537)
                            +-+-...+-+. .+.+                      .|. +...+-+....+-.. +..-.+++-|      
T Consensus       277 ------pewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~m-g~e~~vR~~~~c~~~i  349 (404)
T KOG1409|consen  277 ------PEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTM-GFEFSVRVCDSCYPTI  349 (404)
T ss_pred             ------ccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccc-cceeEEEEecccchhh
Confidence                  11111111000 0000                      000 111111111111111 1222344443      


Q ss_pred             --CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        441 --LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       441 --~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                        ... .++..+..-...|+.+.+...-.+|+|++.|..|+|||++.
T Consensus       350 ~~~~~-t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  350 KDEER-TPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             hcCCC-CccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence              221 23444433334589999988888999999999999999853

>KOG4547|consensus

Probab=99.37  E-value=1.5e-10  Score=106.35  Aligned_cols=189  Identities=16%  Similarity=0.186  Sum_probs=140.0

Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee---------C-Ccc---------------eEEEEE
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT---------G-GTV---------------ELLASG  291 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~v---------------~~l~~~  291 (537)
                      .|...++|....||.++  +|+...++.....  .| ...+.+..         . .+.               ..++-|
T Consensus         2 ~~~~~~~A~~~~~g~l~--iw~t~~~~~~~e~--~p-~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlg   76 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLR--IWDTAKNQLQQEF--AP-IASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLG   76 (541)
T ss_pred             CchhheEeecCCCCeEE--EEEccCceeeeee--cc-chhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEee
Confidence            35567999999999999  9999886432221  00 11111100         0 000               678889


Q ss_pred             eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEE
Q psy10942        292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVST  371 (537)
Q Consensus       292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~  371 (537)
                      ...|.|.+|+...++...++   .-..|.+.|.++.++.+-..|.+++.|+.+..|+.. ....++.....+.       
T Consensus        77 t~~g~v~~ys~~~g~it~~~---st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~-~~~~~~~~~~~~~-------  145 (541)
T KOG4547|consen   77 TPQGSVLLYSVAGGEITAKL---STDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEK-EKVIIRIWKEQKP-------  145 (541)
T ss_pred             cCCccEEEEEecCCeEEEEE---ecCCCCCcceeeecccccCceEecCCceeEEEEecc-cceeeeeeccCCC-------
Confidence            99999999999988765433   235788999999999888899999999999999988 4444444433332       


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                                                                .+.+++.+||+..+++++  +.|++||+++++.+..|.
T Consensus       146 ------------------------------------------~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ft  181 (541)
T KOG4547|consen  146 ------------------------------------------LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFT  181 (541)
T ss_pred             ------------------------------------------ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEec
Confidence                                                      677899999999999987  589999999999999999


Q ss_pred             cCCcceEEEEEecC-----CCEEEE-EeCCCcEEEEECCC
Q psy10942        452 GHDASVLRCHFINK-----GTQIVS-TGADGLLKLWSIKT  485 (537)
Q Consensus       452 ~~~~~v~~~~~s~~-----~~~l~s-~~~dg~v~vwd~~~  485 (537)
                      +|.++|+++.|-.+     |.++.+ ...+..+.+|-.+.
T Consensus       182 gh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  182 GHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             CCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            99999999999876     566554 44456678886543

>KOG4547|consensus

Probab=99.37  E-value=4.9e-11  Score=109.56  Aligned_cols=174  Identities=16%  Similarity=0.165  Sum_probs=140.1

Q ss_pred             CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC---------------------------------CCCEEEEEcCCCc
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK---------------------------------KGTQIVSTGADGL  376 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---------------------------------~~~~l~~~~~d~~  376 (537)
                      |-..++|....||.+++|+.. ..+....+....                                 +...++-|...|.
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~-~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~   81 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTA-KNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS   81 (541)
T ss_pred             chhheEeecCCCCeEEEEEcc-CceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence            456789999999999999987 333333222111                                 1356778888999


Q ss_pred             EEEEECCCCeeeeeec--cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942        377 LKLWSIKTSTCVSTFD--KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                      |.+|+...++....+.  .|..                 ++.++.++.+-..|.+++.|+.+..|+....+.+..++...
T Consensus        82 v~~ys~~~g~it~~~st~~h~~-----------------~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~  144 (541)
T KOG4547|consen   82 VLLYSVAGGEITAKLSTDKHYG-----------------NVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQK  144 (541)
T ss_pred             EEEEEecCCeEEEEEecCCCCC-----------------cceeeecccccCceEecCCceeEEEEecccceeeeeeccCC
Confidence            9999999999888776  3444                 67777778888899999999999999999999999999988


Q ss_pred             cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecC-----CCEEEEE-
Q psy10942        455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN-----SDCEYRG-  528 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~-----~~~l~s~-  528 (537)
                      ..+.+++.+||++.|++++.  .|++||+++.+.+..|.+|.++|           ..+   +|..+     |.++.++ 
T Consensus       145 ~~~~sl~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v-----------~t~---~f~~~~~g~~G~~vLssa  208 (541)
T KOG4547|consen  145 PLVSSLCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPV-----------RTL---SFTTLIDGIIGKYVLSSA  208 (541)
T ss_pred             CccceEEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcce-----------EEE---EEEEeccccccceeeecc
Confidence            89999999999999999865  79999999999999999999999           888   88877     6666553 


Q ss_pred             eCCCCEEeC
Q psy10942        529 GWSPQVVVY  537 (537)
Q Consensus       529 ~~dg~i~vW  537 (537)
                      ..+..+.+|
T Consensus       209 ~~~r~i~~w  217 (541)
T KOG4547|consen  209 AAERGITVW  217 (541)
T ss_pred             ccccceeEE
Confidence            444445444

>KOG1912|consensus

Probab=99.36  E-value=7.7e-11  Score=111.44  Aligned_cols=400  Identities=10%  Similarity=0.072  Sum_probs=232.6

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEecc------------ccEEEEEeCCceEEEEecccccCccccc
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSV------------KRMYAVVTADHNISLYRLNSETGLEERP  135 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~------------~~~la~~~~d~~i~iwd~~~~~~~~~~~  135 (537)
                      +++-|+ ...|.+-|..+.+.++.+..| ..|+.+.|.|-            .-.||++...|.|.+||...        
T Consensus        28 LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~--------   98 (1062)
T KOG1912|consen   28 LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVL--------   98 (1062)
T ss_pred             eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehh--------
Confidence            455554 556899999999999999977 58999999762            12577788889999999998        


Q ss_pred             ccccceeEEeecchhhhhhhhcccC--CC-ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc
Q psy10942        136 NKILKFRKQFVGFSDEILDIALLGE--ED-SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ  212 (537)
Q Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~~~~--~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~  212 (537)
                         ...+..+..|.+++..++|-+.  +. ..|++..+...    +                 .+|+.       .+++.
T Consensus        99 ---~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~----l-----------------vLwnt-------dtG~k  147 (1062)
T KOG1912|consen   99 ---ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSST----L-----------------VLWNT-------DTGEK  147 (1062)
T ss_pred             ---hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcE----E-----------------EEEEc-------cCCce
Confidence               6777888989999999999752  33 34444454444    7                 78887       77766


Q ss_pred             cccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCc---cccc--cccc--ccce-----ee-
Q psy10942        213 QKHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHF---PLFG--IFVP--EAEH-----GA-  278 (537)
Q Consensus       213 ~l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~---~~~~--~~~~--~~~~-----~~-  278 (537)
                      ..+.   ...  .....|+   .+.| |.+.+..-+..|.+.  +-+......   +...  ...+  ....     .. 
T Consensus       148 ~Wk~---~ys--~~iLs~f---~~DPfd~rh~~~l~s~g~vl--~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~  217 (1062)
T KOG1912|consen  148 FWKY---DYS--HEILSCF---RVDPFDSRHFCVLGSKGFVL--SCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATG  217 (1062)
T ss_pred             eecc---ccC--Ccceeee---eeCCCCcceEEEEccCceEE--EEeccCCCCCCCCceeEEEecCccchhhhhhhhhcc
Confidence            6210   022  3455567   6666 344454444445444  333222111   0000  0000  0000     00 


Q ss_pred             -eeeC--Ccc---------------eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC--CEEEEE
Q psy10942        279 -FYTG--GTV---------------ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND--KLLASG  338 (537)
Q Consensus       279 -~~~~--~~v---------------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~  338 (537)
                       .++.  .+.               +.++.....+.+.++|++-...+...     .-..+.+.-+.+-|++  ..|++.
T Consensus       218 ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vv-----pier~~akfv~vlP~~~rd~Lfcl  292 (1062)
T KOG1912|consen  218 NSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVV-----PIERGGAKFVDVLPDPRRDALFCL  292 (1062)
T ss_pred             ccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEE-----EeccCCcceeEeccCCCcceEEEE
Confidence             0000  000               33444445678999999877664433     2233445566677765  468999


Q ss_pred             eCCCcEEEEEccCC---------------ceeeEEEEecC------------CCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        339 SLDKTVKVWSTTGG---------------LKLLNVLRGHK------------KGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       339 ~~d~~i~i~d~~~~---------------~~~~~~~~~~~------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      ..||.+.+|--+..               +.....+..-.            ....++.--.+|...+|.+++++.-...
T Consensus       293 H~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~  372 (1062)
T KOG1912|consen  293 HSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDY  372 (1062)
T ss_pred             ecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCccc
Confidence            99999999975521               11111111111            1222333345677778887765422111


Q ss_pred             cc-------------CCcceE---EEEEecCCCc-----eEEe----eeeEEEEcCCC-------CEEEEEeCCCcEEEE
Q psy10942        392 DK-------------HALKIW---TLAITKDENQ-----IITG----GVWFVNFSPLD-------RILISSSGDATIKLW  439 (537)
Q Consensus       392 ~~-------------~~~~i~---~~~~~~~~~~-----~~~~----~i~~~~~s~~~-------~~l~~~~~dg~i~i~  439 (537)
                      ..             ....+.   -+..+.+|..     +...    ...-..-.|-+       .++|.|...|+|.++
T Consensus       373 ~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vv  452 (1062)
T KOG1912|consen  373 RSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVV  452 (1062)
T ss_pred             ccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEE
Confidence            11             000000   0111112100     0000    01111122222       268899999999999


Q ss_pred             ECCCceeeeEeecCCcceEEEEEecCCCEEEEEe---------CCCcEEEEECCCCeeE--EEecC-CccceeccCCCCC
Q psy10942        440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG---------ADGLLKLWSIKTSTCV--STFDK-HALKIRNSDSEND  507 (537)
Q Consensus       440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~---------~dg~v~vwd~~~~~~~--~~~~~-~~~~i~~~~~~~~  507 (537)
                      |+.++.....+..|...|.++.|-...+++-.+.         .-+.+.+-|+++|...  +.+++ ...+|        
T Consensus       453 dvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI--------  524 (1062)
T KOG1912|consen  453 DVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPI--------  524 (1062)
T ss_pred             EecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcc--------
Confidence            9999999999999999999999987655443222         1245778889888543  22222 34566        


Q ss_pred             CccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        508 HKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       508 ~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                         ..+   ..|..++||+..-.|.-+.+|
T Consensus       525 ---~~i---rvS~~~~yLai~Fr~~plEiw  548 (1062)
T KOG1912|consen  525 ---RAI---RVSSSGRYLAILFRREPLEIW  548 (1062)
T ss_pred             ---eee---eecccCceEEEEecccchHHH
Confidence               778   899999999998888777666

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.35  E-value=1.3e-10  Score=112.06  Aligned_cols=236  Identities=10%  Similarity=0.012  Sum_probs=136.7

Q ss_pred             eEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHH
Q psy10942        119 NISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTF  198 (537)
Q Consensus       119 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~w  198 (537)
                      .|.++|.++           .. .+.+..+...+.+..|+ |+++.|+..+.... ...|                 .+|
T Consensus       199 ~l~i~d~dG-----------~~-~~~l~~~~~~~~~p~wS-PDG~~La~~s~~~g-~~~L-----------------~~~  247 (448)
T PRK04792        199 QLMIADYDG-----------YN-EQMLLRSPEPLMSPAWS-PDGRKLAYVSFENR-KAEI-----------------FVQ  247 (448)
T ss_pred             EEEEEeCCC-----------CC-ceEeecCCCcccCceEC-CCCCEEEEEEecCC-CcEE-----------------EEE
Confidence            567777766           22 24555566778899999 78888877654321 1336                 777


Q ss_pred             HHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccce
Q psy10942        199 ERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAEH  276 (537)
Q Consensus       199 d~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~  276 (537)
                      |+       .+++.. +.     ..  .......   .|+|||+.|+.. +.++..                        
T Consensus       248 dl-------~tg~~~~lt-----~~--~g~~~~~---~wSPDG~~La~~~~~~g~~------------------------  286 (448)
T PRK04792        248 DI-------YTQVREKVT-----SF--PGINGAP---RFSPDGKKLALVLSKDGQP------------------------  286 (448)
T ss_pred             EC-------CCCCeEEec-----CC--CCCcCCe---eECCCCCEEEEEEeCCCCe------------------------
Confidence            77       665544 33     22  2334467   899999987743 333322                        


Q ss_pred             eeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEEccCCc
Q psy10942        277 GAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKT--VKVWSTTGGL  353 (537)
Q Consensus       277 ~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~--i~i~d~~~~~  353 (537)
                                         .|+++|+.+++.      ..+..+.......+|+|||+.++..+. ++.  |+++|+.   
T Consensus       287 -------------------~Iy~~dl~tg~~------~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~---  338 (448)
T PRK04792        287 -------------------EIYVVDIATKAL------TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA---  338 (448)
T ss_pred             -------------------EEEEEECCCCCe------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC---
Confidence                               345555555432      112223344567899999998877653 232  3333333   


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee-eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                                                    +++.... +...                   .....+|+|||++|+..+.
T Consensus       339 ------------------------------~g~~~~Lt~~g~-------------------~~~~~~~SpDG~~l~~~~~  369 (448)
T PRK04792        339 ------------------------------SGKVSRLTFEGE-------------------QNLGGSITPDGRSMIMVNR  369 (448)
T ss_pred             ------------------------------CCCEEEEecCCC-------------------CCcCeeECCCCCEEEEEEe
Confidence                                          2211110 0000                   1223578899988877654


Q ss_pred             -CC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC-C--cEEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942        433 -DA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-G--LLKLWSIKTSTCVSTFDKHALKIRNSDSEN  506 (537)
Q Consensus       433 -dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g--~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~  506 (537)
                       ++  .|.++|+.+++.. .+... .......|+|||++|+..+.+ +  .+++++. +|.....+..+.+.+       
T Consensus       370 ~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~-------  439 (448)
T PRK04792        370 TNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEV-------  439 (448)
T ss_pred             cCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCc-------
Confidence             33  4566788776543 23222 122345899999988876553 3  3777786 566667776665566       


Q ss_pred             CCccccccceeeec
Q psy10942        507 DHKGFGLPRQLCSR  520 (537)
Q Consensus       507 ~~~~~~~~~~~~s~  520 (537)
                          ...   +|||
T Consensus       440 ----~~p---~Wsp  446 (448)
T PRK04792        440 ----KSP---AWSP  446 (448)
T ss_pred             ----CCC---ccCC
Confidence                666   8887

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.32  E-value=5.1e-10  Score=106.95  Aligned_cols=93  Identities=11%  Similarity=-0.086  Sum_probs=62.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC---CCcEEEEECCCCe
Q psy10942        414 GVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA---DGLLKLWSIKTST  487 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---dg~v~vwd~~~~~  487 (537)
                      .+....|||||+.|+....+   ..|.+||+.+++.... ......+....|+|||+.|+..+.   ...|+++|+..++
T Consensus       328 ~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~L-t~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~  406 (428)
T PRK01029        328 NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQL-TTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKK  406 (428)
T ss_pred             CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEc-cCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            34557789999888876543   4699999988876443 323345678999999998875543   3568899998776


Q ss_pred             eEEEecCCccceeccCCCCCCccccccceeeecCC
Q psy10942        488 CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS  522 (537)
Q Consensus       488 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  522 (537)
                      ...... ..+.+           ...   +|+|-.
T Consensus       407 ~~~Lt~-~~g~~-----------~~p---~Ws~~~  426 (428)
T PRK01029        407 TRKIVI-GSGEK-----------RFP---SWGAFP  426 (428)
T ss_pred             EEEeec-CCCcc-----------cCc---eecCCC
Confidence            544432 33344           455   888754

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.30  E-value=1.3e-10  Score=112.09  Aligned_cols=122  Identities=10%  Similarity=-0.012  Sum_probs=76.9

Q ss_pred             eEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         78 LLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      .|.++|.............+.+.+..|||||+.|+..+.+   ..|.+||+.++           +. ..+....+....
T Consensus       199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg-----------~~-~~lt~~~g~~~~  266 (448)
T PRK04792        199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQ-----------VR-EKVTSFPGINGA  266 (448)
T ss_pred             EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCC-----------Ce-EEecCCCCCcCC
Confidence            5777787655443333445688999999999999887543   25888898873           22 222222333457


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEec
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~  233 (537)
                      .+|+ |+++.|++...... ...|                 .++|+       .+++.. +.     .+  .......  
T Consensus       267 ~~wS-PDG~~La~~~~~~g-~~~I-----------------y~~dl-------~tg~~~~lt-----~~--~~~~~~p--  311 (448)
T PRK04792        267 PRFS-PDGKKLALVLSKDG-QPEI-----------------YVVDI-------ATKALTRIT-----RH--RAIDTEP--  311 (448)
T ss_pred             eeEC-CCCCEEEEEEeCCC-CeEE-----------------EEEEC-------CCCCeEECc-----cC--CCCccce--
Confidence            7899 77787766433211 1236                 66677       655544 55     45  5556677  


Q ss_pred             cCcccCCCeeeecc
Q psy10942        234 GKTVKEEDLFPRQS  247 (537)
Q Consensus       234 ~~~s~~~~~l~~~~  247 (537)
                       .|+|||+.++..+
T Consensus       312 -~wSpDG~~I~f~s  324 (448)
T PRK04792        312 -SWHPDGKSLIFTS  324 (448)
T ss_pred             -EECCCCCEEEEEE
Confidence             8999998887544

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.30  E-value=1.6e-09  Score=104.89  Aligned_cols=197  Identities=12%  Similarity=0.012  Sum_probs=128.8

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCce-ee-------EEEEecC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLK-LL-------NVLRGHK  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~-~~-------~~~~~~~  363 (537)
                      ..|.++|......      ..+..+...+...+|+|||++|+.+..+   ..|++||+..+.. .+       ......+
T Consensus       170 ~~l~~~d~~g~~~------~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~sp  243 (417)
T TIGR02800       170 YELQVADYDGANP------QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSP  243 (417)
T ss_pred             ceEEEEcCCCCCC------EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECC
Confidence            4688888765432      2234456678899999999999887654   4799999974321 11       1233456


Q ss_pred             CCCEEE-EEcCCC--cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-C--cEE
Q psy10942        364 KGTQIV-STGADG--LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-A--TIK  437 (537)
Q Consensus       364 ~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~i~  437 (537)
                      +++.++ +.+.++  .|++||+.+++..... .+..                 ......|+||++.|+..+.. +  .|+
T Consensus       244 Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~-~~~~-----------------~~~~~~~s~dg~~l~~~s~~~g~~~iy  305 (417)
T TIGR02800       244 DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLT-NGPG-----------------IDTEPSWSPDGKSIAFTSDRGGSPQIY  305 (417)
T ss_pred             CCCEEEEEECCCCCccEEEEECCCCCEEECC-CCCC-----------------CCCCEEECCCCCEEEEEECCCCCceEE
Confidence            677665 444444  5888888876543222 2211                 22345788999888766543 3  588


Q ss_pred             EEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       438 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      ++|+.+++. ..+..+...+..+.|+|++++|+.++.++   .|.+||+.++.. ..+... ...           ... 
T Consensus       306 ~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~-----------~~p-  370 (417)
T TIGR02800       306 MMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLD-----------ESP-  370 (417)
T ss_pred             EEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCC-----------CCc-
Confidence            888877654 34444556677889999999999888776   789999887654 333222 123           455 


Q ss_pred             ceeeecCCCEEEEEeCCC
Q psy10942        515 RQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~dg  532 (537)
                        .|+|||+.|+.++.++
T Consensus       371 --~~spdg~~l~~~~~~~  386 (417)
T TIGR02800       371 --SFAPNGRMILYATTRG  386 (417)
T ss_pred             --eECCCCCEEEEEEeCC
Confidence              8999999888776654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.29  E-value=5.4e-09  Score=97.57  Aligned_cols=286  Identities=14%  Similarity=0.114  Sum_probs=161.2

Q ss_pred             ceEEeeec--cceeh--hhhcCCCcceEEEEEeccccEEEEEeC----CceEEEEecccccCcccccccccceeEEeecc
Q psy10942         77 SLLHYYET--SAVKE--LYQHGLSSPLVRIVRSSVKRMYAVVTA----DHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        77 ~~i~~wd~--~~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      +.|.+|++  ++++.  +...........++++|++++|.+...    ++.|..|++.....       ..+.+.+....
T Consensus        13 ~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g-------~L~~~~~~~~~   85 (345)
T PF10282_consen   13 GGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTG-------TLTLLNSVPSG   85 (345)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTT-------EEEEEEEEEES
T ss_pred             CcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcc-------eeEEeeeeccC
Confidence            67888887  44433  233333457788999999999999877    46899998876211       03344444433


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-ccc-c-ccccc------
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-SQQ-K-HNTER------  219 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-~~~-l-~~~~~------  219 (537)
                      ......++++ +++++|+++....   +.+                 .++++       ... ... . .....      
T Consensus        86 g~~p~~i~~~-~~g~~l~vany~~---g~v-----------------~v~~l-------~~~g~l~~~~~~~~~~g~g~~  137 (345)
T PF10282_consen   86 GSSPCHIAVD-PDGRFLYVANYGG---GSV-----------------SVFPL-------DDDGSLGEVVQTVRHEGSGPN  137 (345)
T ss_dssp             SSCEEEEEEC-TTSSEEEEEETTT---TEE-----------------EEEEE-------CTTSEEEEEEEEEESEEEESS
T ss_pred             CCCcEEEEEe-cCCCEEEEEEccC---CeE-----------------EEEEc-------cCCcccceeeeecccCCCCCc
Confidence            3344567888 7777777765322   336                 44544       221 111 0 00000      


Q ss_pred             --ccCCCcCeEEEEeccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        220 --LGRDELKTVTLLERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       220 --~~h~~~~~v~~~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                        ...  .....++   .++|+++++++... ...|.  +++++.                                   
T Consensus       138 ~~rq~--~~h~H~v---~~~pdg~~v~v~dlG~D~v~--~~~~~~-----------------------------------  175 (345)
T PF10282_consen  138 PDRQE--GPHPHQV---VFSPDGRFVYVPDLGADRVY--VYDIDD-----------------------------------  175 (345)
T ss_dssp             TTTTS--STCEEEE---EE-TTSSEEEEEETTTTEEE--EEEE-T-----------------------------------
T ss_pred             ccccc--cccceeE---EECCCCCEEEEEecCCCEEE--EEEEeC-----------------------------------
Confidence              011  3446788   89999988775432 12344  444433                                   


Q ss_pred             EEEEECCCCce-eeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEE---ecCCCCEEEEE
Q psy10942        297 VKVWSTTGGLK-LLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLR---GHKKGTQIVST  371 (537)
Q Consensus       297 i~i~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~---~~~~~~~l~~~  371 (537)
                              ... +... ..........-+.++|+|+++++++.. .++.|.++++......+..+.   ..+.       
T Consensus       176 --------~~~~l~~~-~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~-------  239 (345)
T PF10282_consen  176 --------DTGKLTPV-DSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE-------  239 (345)
T ss_dssp             --------TS-TEEEE-EEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET-------
T ss_pred             --------CCceEEEe-eccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc-------
Confidence                    220 0000 001112345578999999999887765 467788888872111111111   1000       


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCC--c--ee
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTD--Y--VC  446 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~--~--~~  446 (537)
                                        .+....                  ....++++|||++|.++. .++.|.+|++..  +  +.
T Consensus       240 ------------------~~~~~~------------------~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~  283 (345)
T PF10282_consen  240 ------------------GFTGEN------------------APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTL  283 (345)
T ss_dssp             ------------------TSCSSS------------------SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEE
T ss_pred             ------------------cccccC------------------CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEE
Confidence                              000000                  466788999999888776 457899999832  3  34


Q ss_pred             eeEeecCCcceEEEEEecCCCEEEEEeC-CCcEEEEEC--CCCeeEEE
Q psy10942        447 LKSLEGHDASVLRCHFINKGTQIVSTGA-DGLLKLWSI--KTSTCVST  491 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~--~~~~~~~~  491 (537)
                      +..+.......+.++++|+|++|+++.. ++.|.+|++  ++|.+...
T Consensus       284 ~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~  331 (345)
T PF10282_consen  284 VQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPV  331 (345)
T ss_dssp             EEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred             EEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEe
Confidence            4444444455799999999999998875 578999866  56765543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.29  E-value=1.6e-08  Score=88.16  Aligned_cols=296  Identities=12%  Similarity=0.092  Sum_probs=163.1

Q ss_pred             cceEEeeeccc----eehhhhcCCCcceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecc
Q psy10942         76 KSLLHYYETSA----VKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        76 ~~~i~~wd~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      +..|++|++.+    ...+......+.++-|+|+|+++.|.++-.+   |.|.-|.++...+.       ...+......
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~-------Lt~ln~~~~~   87 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR-------LTFLNRQTLP   87 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe-------EEEeeccccC
Confidence            45599999873    2345555566799999999999998888654   66777777652110       2333322222


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCC--CcC
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRD--ELK  226 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~--~~~  226 (537)
                      .....-++++ +++++++++....   |.| ...++... .      .+|..       .  +. +.......|.  +..
T Consensus        88 g~~p~yvsvd-~~g~~vf~AnY~~---g~v-~v~p~~~d-G------~l~~~-------v--~~-~~h~g~~p~~rQ~~~  145 (346)
T COG2706          88 GSPPCYVSVD-EDGRFVFVANYHS---GSV-SVYPLQAD-G------SLQPV-------V--QV-VKHTGSGPHERQESP  145 (346)
T ss_pred             CCCCeEEEEC-CCCCEEEEEEccC---ceE-EEEEcccC-C------ccccc-------e--ee-eecCCCCCCccccCC
Confidence            2233667787 6777777665433   334 11111111 1      11111       0  00 0000000110  011


Q ss_pred             eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942        227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      -+...   .+.|++++|++..-.           .                                 -.|.+|++..+.
T Consensus       146 h~H~a---~~tP~~~~l~v~DLG-----------~---------------------------------Dri~~y~~~dg~  178 (346)
T COG2706         146 HVHSA---NFTPDGRYLVVPDLG-----------T---------------------------------DRIFLYDLDDGK  178 (346)
T ss_pred             cccee---eeCCCCCEEEEeecC-----------C---------------------------------ceEEEEEcccCc
Confidence            26677   889999888865421           1                                 123334433222


Q ss_pred             eeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      ..... ...+ .....-+.|.|+|++++.+..++ +++|.+|........+..++.+..                     
T Consensus       179 L~~~~-~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~t---------------------  235 (346)
T COG2706         179 LTPAD-PAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDT---------------------  235 (346)
T ss_pred             ccccc-cccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeecc---------------------
Confidence            11110 1111 22345688999999998887664 788999998843233333332211                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCC--cee--eeEeecCCcceEEE
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTD--YVC--LKSLEGHDASVLRC  460 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~--~~~--~~~~~~~~~~v~~~  460 (537)
                       ....|.+..                  +...+..+|||++|.++.. ...|.+|.+..  +++  +.....+...-+..
T Consensus       236 -lP~dF~g~~------------------~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F  296 (346)
T COG2706         236 -LPEDFTGTN------------------WAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDF  296 (346)
T ss_pred             -CccccCCCC------------------ceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccc
Confidence             000011111                  5667889999999988754 34777887654  322  12222334446889


Q ss_pred             EEecCCCEEEEEeCC-CcEEEEECC--CCeeE
Q psy10942        461 HFINKGTQIVSTGAD-GLLKLWSIK--TSTCV  489 (537)
Q Consensus       461 ~~s~~~~~l~s~~~d-g~v~vwd~~--~~~~~  489 (537)
                      .|++++++|+++..+ ..|.+|..+  +|++-
T Consensus       297 ~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~  328 (346)
T COG2706         297 NINPSGRFLIAANQKSDNITVFERDKETGRLT  328 (346)
T ss_pred             eeCCCCCEEEEEccCCCcEEEEEEcCCCceEE
Confidence            999999999999875 458888653  55543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.28  E-value=2.1e-09  Score=102.37  Aligned_cols=252  Identities=11%  Similarity=0.031  Sum_probs=154.3

Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++..++.++.++.+.  .+|..+++.................. .  ..++.+..++.+..+|.++++...+..... ..
T Consensus       104 ~~~~v~v~~~~g~l~--ald~~tG~~~W~~~~~~~~~~~p~v~-~--~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~  177 (377)
T TIGR03300       104 DGGLVFVGTEKGEVI--ALDAEDGKELWRAKLSSEVLSPPLVA-N--GLVVVRTNDGRLTALDAATGERLWTYSRVT-PA  177 (377)
T ss_pred             cCCEEEEEcCCCEEE--EEECCCCcEeeeeccCceeecCCEEE-C--CEEEEECCCCeEEEEEcCCCceeeEEccCC-Cc
Confidence            466777888888888  88887754433221111110000000 1  467778889999999999887654431100 00


Q ss_pred             cC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----------------cC--CCCEEEEEcCCCcEE
Q psy10942        319 HE-KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----------------HK--KGTQIVSTGADGLLK  378 (537)
Q Consensus       319 ~~-~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------~~--~~~~l~~~~~d~~i~  378 (537)
                      .. ....+.... + ..++.+..++.+..+|+.++ +.+-....                 .+  .+..++.++.+|.+.
T Consensus       178 ~~~~~~~sp~~~-~-~~v~~~~~~g~v~ald~~tG-~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~  254 (377)
T TIGR03300       178 LTLRGSASPVIA-D-GGVLVGFAGGKLVALDLQTG-QPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVA  254 (377)
T ss_pred             eeecCCCCCEEE-C-CEEEEECCCCEEEEEEccCC-CEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEE
Confidence            00 000111122 2 46777888899999998733 33221110                 00  246778888899999


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc-ce
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA-SV  457 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v  457 (537)
                      .+|..+++.+.......                   ....  ..++..++.++.+|.+..+|..+++.+........ ..
T Consensus       255 a~d~~tG~~~W~~~~~~-------------------~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~  313 (377)
T TIGR03300       255 ALDLRSGRVLWKRDASS-------------------YQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQL  313 (377)
T ss_pred             EEECCCCcEEEeeccCC-------------------ccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCcc
Confidence            99999998766553211                   0111  12356777788899999999999988776632222 22


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+...  .+..|++++.+|.|+++|..+|+.+..++.+...+.          .+.   .+. + +.|+.++.||.|..|
T Consensus       314 ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~----------~sp---~~~-~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       314 TAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIA----------SPP---VVV-G-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             ccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccc----------cCC---EEE-C-CEEEEEeCCceEEEe
Confidence            22222  356899999999999999999999998887665440          222   332 3 358888999998754

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0309|consensus

Probab=99.27  E-value=7.2e-11  Score=111.01  Aligned_cols=296  Identities=16%  Similarity=0.188  Sum_probs=185.0

Q ss_pred             hhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc-hhhhhhhhcccCCCc-cEEEe
Q psy10942         91 YQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF-SDEILDIALLGEEDS-HIVVA  168 (537)
Q Consensus        91 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-~l~~~  168 (537)
                      ..++..+++.++..+|.|+-+|.++.-| +.+.|++..          ....+.+..- .-.|-.+.|+|.... +-++.
T Consensus        19 lsl~v~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p----------~~ppr~l~h~tpw~vad~qws~h~a~~~wiVs   87 (1081)
T KOG0309|consen   19 LSLKVDGGFNAVSINPSGRDIVLASRQG-LYIIDLDDP----------FTPPRWLHHITPWQVADVQWSPHPAKPYWIVS   87 (1081)
T ss_pred             eEEEecCcccceeeccccchhhhhhhcC-eEEEeccCC----------CCCceeeeccCcchhcceecccCCCCceeEEe
Confidence            3445557899999999999999999866 667788763          3333333322 224677788853322 23344


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC-Ceeeecc
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQS  247 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~  247 (537)
                      +...+    -                 .+|++.....  +..+..+.     ||  ...|+.+   .|.|.. ..+++++
T Consensus        88 ts~qk----a-----------------iiwnlA~ss~--~aIef~lh-----gh--sraitd~---n~~~q~pdVlatcs  134 (1081)
T KOG0309|consen   88 TSNQK----A-----------------IIWNLAKSSS--NAIEFVLH-----GH--SRAITDI---NFNPQHPDVLATCS  134 (1081)
T ss_pred             cCcch----h-----------------hhhhhhcCCc--cceEEEEe-----cC--ccceecc---ccCCCCCcceeecc
Confidence            44444    5                 7899822111  11222277     99  9999999   999865 5778899


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      .|-.+.  .|+++....                               -+..|+.-.                .....++
T Consensus       135 vdt~vh--~wd~rSp~~-------------------------------p~ys~~~w~----------------s~asqVk  165 (1081)
T KOG0309|consen  135 VDTYVH--AWDMRSPHR-------------------------------PFYSTSSWR----------------SAASQVK  165 (1081)
T ss_pred             ccccce--eeeccCCCc-------------------------------ceeeeeccc----------------ccCceee
Confidence            999999  999988422                               233333211                1234567


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-----------CCEEEEEcCCCcEEEEECCCCeeee-eeccCC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----------GTQIVSTGADGLLKLWSIKTSTCVS-TFDKHA  395 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~  395 (537)
                      |+.....+.+.+..+.|.+||++.+..++..++.|..           ...+.+.+.|++|+.||........ ......
T Consensus       166 wnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~  245 (1081)
T KOG0309|consen  166 WNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTN  245 (1081)
T ss_pred             ecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceecccc
Confidence            7764444444556678999999988888888887653           3567888999999999987653322 222334


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecCC--------
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKG--------  466 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~--------  466 (537)
                      .+++.-.+.|-+..      .++-+...+..+..-..+..-..|+..+ .++++.+.||.+.|....|-..+        
T Consensus       246 ~piw~~r~~Pfg~g------~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~  319 (1081)
T KOG0309|consen  246 FPIWRGRYLPFGEG------YCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDS  319 (1081)
T ss_pred             CcceeccccccCce------eEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCc
Confidence            45555555554421      1222222222111111222333344333 46899999999998877764322        


Q ss_pred             --CEEEEEeCCCcEEEEECCC
Q psy10942        467 --TQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       467 --~~l~s~~~dg~v~vwd~~~  485 (537)
                        -.|+|-+.|..+++|-+.+
T Consensus       320 rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  320 RDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             cceeEEEeecCCceEeeeccH
Confidence              2699999999999998753

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.27  E-value=4.3e-08  Score=91.58  Aligned_cols=223  Identities=13%  Similarity=0.122  Sum_probs=133.7

Q ss_pred             eEEEEEeC----CCeEEEEECCCC-ceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEE-
Q psy10942        286 ELLASGSL----DKTVKVWSTTGG-LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNV-  358 (537)
Q Consensus       286 ~~l~~~~~----d~~i~i~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~-  358 (537)
                      ++|.+...    ++.|..|++... ..+..+  ............++++|++++|+++. .+|.+.++++...+..... 
T Consensus        49 ~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~--~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~  126 (345)
T PF10282_consen   49 RRLYVVNEGSGDSGGVSSYRIDPDTGTLTLL--NSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVV  126 (345)
T ss_dssp             SEEEEEETTSSTTTEEEEEEEETTTTEEEEE--EEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEE
T ss_pred             CEEEEEEccccCCCCEEEEEECCCcceeEEe--eeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceee
Confidence            34555544    679999988775 222221  12222344567899999999998886 5899999999854433322 


Q ss_pred             ----------------------EEecCCCCEEEEEc-CCCcEEEEECCCCee-eeeeccCCcceEEEEEecCCCceEEee
Q psy10942        359 ----------------------LRGHKKGTQIVSTG-ADGLLKLWSIKTSTC-VSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       359 ----------------------~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                                            +...++++++++.. ....|.+|++..... +..       ...+.. |.+.     +
T Consensus       127 ~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~-------~~~~~~-~~G~-----G  193 (345)
T PF10282_consen  127 QTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTP-------VDSIKV-PPGS-----G  193 (345)
T ss_dssp             EEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEE-------EEEEEC-STTS-----S
T ss_pred             eecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEE-------eecccc-ccCC-----C
Confidence                                  22233456555543 345677777765431 111       111111 1111     6


Q ss_pred             eeEEEEcCCCCEEEEEeC-CCcEEEEECC--Cce--eeeEeecC------CcceEEEEEecCCCEEEEEeC-CCcEEEEE
Q psy10942        415 VWFVNFSPLDRILISSSG-DATIKLWCLT--DYV--CLKSLEGH------DASVLRCHFINKGTQIVSTGA-DGLLKLWS  482 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~--~~~~~~~~------~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd  482 (537)
                      ...++|+|+++++.+..+ ++.|.++++.  ++.  .+..+...      ......++++|||++|+++.. ++.|.+|+
T Consensus       194 PRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~  273 (345)
T PF10282_consen  194 PRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFD  273 (345)
T ss_dssp             EEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEE
T ss_pred             CcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEE
Confidence            788999999998877654 6789999988  332  23333211      125788999999999887764 67899999


Q ss_pred             CC--CCeeE--EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC-CCCEEeC
Q psy10942        483 IK--TSTCV--STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       483 ~~--~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~vW  537 (537)
                      ++  ++++.  ..+.......           +.+   +++|+|++|++++. ++.|.+|
T Consensus       274 ~d~~~g~l~~~~~~~~~G~~P-----------r~~---~~s~~g~~l~Va~~~s~~v~vf  319 (345)
T PF10282_consen  274 LDPATGTLTLVQTVPTGGKFP-----------RHF---AFSPDGRYLYVANQDSNTVSVF  319 (345)
T ss_dssp             ECTTTTTEEEEEEEEESSSSE-----------EEE---EE-TTSSEEEEEETTTTEEEEE
T ss_pred             EecCCCceEEEEEEeCCCCCc-----------cEE---EEeCCCCEEEEEecCCCeEEEE
Confidence            83  34332  2222212223           777   99999999998874 4556553

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.26  E-value=3.4e-09  Score=100.90  Aligned_cols=298  Identities=10%  Similarity=-0.013  Sum_probs=172.9

Q ss_pred             cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeeccc
Q psy10942        107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGA  186 (537)
Q Consensus       107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~  186 (537)
                      .+..+++++.++.|.-+|..+           ++.+-..............   ++..+++++.++.    +        
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~t-----------G~~~W~~~~~~~~~~~p~v---~~~~v~v~~~~g~----l--------  117 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAET-----------GKRLWRVDLDERLSGGVGA---DGGLVFVGTEKGE----V--------  117 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccC-----------CcEeeeecCCCCcccceEE---cCCEEEEEcCCCE----E--------
Confidence            356788888889999999888           4555444433221122222   3556666665554    6        


Q ss_pred             CCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccc
Q psy10942        187 NRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPL  266 (537)
Q Consensus       187 ~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~  266 (537)
                               ..+|.       .+++...+.    ..  ...+.+.   ... .+..++.+..++.+.  .+|..+++...
T Consensus       118 ---------~ald~-------~tG~~~W~~----~~--~~~~~~~---p~v-~~~~v~v~~~~g~l~--a~d~~tG~~~W  169 (377)
T TIGR03300       118 ---------IALDA-------EDGKELWRA----KL--SSEVLSP---PLV-ANGLVVVRTNDGRLT--ALDAATGERLW  169 (377)
T ss_pred             ---------EEEEC-------CCCcEeeee----cc--CceeecC---CEE-ECCEEEEECCCCeEE--EEEcCCCceee
Confidence                     66676       666665210    11  2222222   111 344666677788888  88887765433


Q ss_pred             ccccccccceeeeeeCCcc--eEEEEEeCCCeEEEEECCCCceeeeeecccccccC--CC---e-EEEEEcCCCCEEEEE
Q psy10942        267 FGIFVPEAEHGAFYTGGTV--ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE--KD---I-NCVTVSPNDKLLASG  338 (537)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~v--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~--~~---v-~~~~~s~~~~~l~~~  338 (537)
                      ......+...........+  ..++.+..++.+..+|..+++...........+..  ..   + ....+  .+..++++
T Consensus       170 ~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~  247 (377)
T TIGR03300       170 TYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAV  247 (377)
T ss_pred             EEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEE
Confidence            3221111111100000000  35777888899999999988764332110000000  00   0 11112  34578888


Q ss_pred             eCCCcEEEEEccCCceeeEEEEec------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        339 SLDKTVKVWSTTGGLKLLNVLRGH------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       339 ~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      +.+|.++.+|.. .++.+-.....      ..+..++.++.+|.+..+|..+++.+.........               
T Consensus       248 ~~~g~l~a~d~~-tG~~~W~~~~~~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~---------------  311 (377)
T TIGR03300       248 SYQGRVAALDLR-SGRVLWKRDASSYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR---------------  311 (377)
T ss_pred             EcCCEEEEEECC-CCcEEEeeccCCccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCC---------------
Confidence            889999999998 44443332211      12677888889999999999999877655321110               


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceE-EEEEecCCCEEEEEeCCCcEEEE
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVL-RCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                       ...+...  .+..+++++.+|.|+++|..+++.+..++.+...+. +..+. + ..|+.++.||.|+.+
T Consensus       312 -~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       312 -QLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             -ccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence             0111111  256888899999999999999999999886664433 33333 3 358888899988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=99.26  E-value=2e-09  Score=101.17  Aligned_cols=442  Identities=11%  Similarity=0.092  Sum_probs=240.2

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceee---------------eec-cccccceeeeEeecCccccccCCcE
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR---------------SYP-AYESLETCAVFHLSDETESKSGGKT   68 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   68 (537)
                      ..|+.|.  .+..+++.||.||.+++-.+.+...-.               ++. +.+.   +.++...+       +.+
T Consensus        17 L~c~~WN--ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~s---V~vvTWNe-------~~Q   84 (1189)
T KOG2041|consen   17 LHCAEWN--KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNAS---VMVVTWNE-------NNQ   84 (1189)
T ss_pred             EEEEEEc--ccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcce---EEEEEecc-------ccc
Confidence            5788999  899999999999999998875532111               111 1112   22233332       556


Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      .+-+...+|.|.+|-+-.|.-...+..+   ..|.+|.|..||+.++....||.|.+=.+++.          .-.-+.+
T Consensus        85 KLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN----------RIwgKeL  154 (1189)
T KOG2041|consen   85 KLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN----------RIWGKEL  154 (1189)
T ss_pred             cccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc----------eecchhc
Confidence            7888889999999999888766555443   58999999999999999999999988777762          1111233


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRD  223 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~  223 (537)
                      ++..  ...+.|+ +|...++.+-..+.    .                 .++|-.-+...+-...+.  .. ..+... 
T Consensus       155 kg~~--l~hv~ws-~D~~~~Lf~~ange----~-----------------hlydnqgnF~~Kl~~~c~Vn~t-g~~s~~-  208 (1189)
T KOG2041|consen  155 KGQL--LAHVLWS-EDLEQALFKKANGE----T-----------------HLYDNQGNFERKLEKDCEVNGT-GIFSNF-  208 (1189)
T ss_pred             chhe--ccceeec-ccHHHHHhhhcCCc----E-----------------EEecccccHHHhhhhceEEeee-eeecCC-
Confidence            3221  3466788 56555555555444    5                 555541110000111111  00 000011 


Q ss_pred             CcCeEEEEecc-----CcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC----
Q psy10942        224 ELKTVTLLERG-----KTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD----  294 (537)
Q Consensus       224 ~~~~v~~~~~~-----~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d----  294 (537)
                       ...|-.+.|.     ..-||...|+.+-.+|.+.  +.+-.+...|..........-..+...+  ..++.++.+    
T Consensus       209 -~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~Q--iMR~eND~~Pvv~dtgm~~vgakWnh~G--~vLAvcG~~~da~  283 (1189)
T KOG2041|consen  209 -PTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQ--IMRSENDPEPVVVDTGMKIVGAKWNHNG--AVLAVCGNDSDAD  283 (1189)
T ss_pred             -CccccceeeccCccccCCCCCCEEEEEEcCceeh--hhhhcCCCCCeEEecccEeecceecCCC--cEEEEccCccccc
Confidence             1123334111     1235888999999999988  8776664433221100001111111112  355555543    


Q ss_pred             -----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEE-----------------------
Q psy10942        295 -----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV-----------------------  346 (537)
Q Consensus       295 -----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i-----------------------  346 (537)
                           +.|.+|..-...      ...++.....|+++.|-..|-.++.+ .|+.|++                       
T Consensus       284 ~~~d~n~v~Fysp~G~i------~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyfanIRP~ykWgy~e~TvVy~y~~~  356 (1189)
T KOG2041|consen  284 EPTDSNKVHFYSPYGHI------VGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYFANIRPEYKWGYIEETVVYVYQKE  356 (1189)
T ss_pred             CccccceEEEeccchhh------eEEEecCCceeeeeEEcCCceEEEEE-ecceEEEEeecccceEEEeeeEEEEEEccC
Confidence                 245555443322      34445556778888887666554443 2344443                       


Q ss_pred             ---------EEccCCceeeEEEEec--------------------C----------------------------------
Q psy10942        347 ---------WSTTGGLKLLNVLRGH--------------------K----------------------------------  363 (537)
Q Consensus       347 ---------~d~~~~~~~~~~~~~~--------------------~----------------------------------  363 (537)
                               ||..+..+.++.....                    .                                  
T Consensus       357 e~p~y~i~Fwdtk~nek~vK~V~~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP  436 (1189)
T KOG2041|consen  357 ELPQYGIMFWDTKTNEKTVKTVTHFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRP  436 (1189)
T ss_pred             CCcceEEEEEecccChhhhhhhcceeehheecccEEEEeccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeee
Confidence                     4433221111111000                    0                                  


Q ss_pred             -----CCCEEEEEcCCCcEEEEECCCCeeeeeecc---CCcceEEEEEecCC----------CceE--EeeeeEEEEcCC
Q psy10942        364 -----KGTQIVSTGADGLLKLWSIKTSTCVSTFDK---HALKIWTLAITKDE----------NQII--TGGVWFVNFSPL  423 (537)
Q Consensus       364 -----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~----------~~~~--~~~i~~~~~s~~  423 (537)
                           .+..++.++ ...+.+|.....+....+.+   +...-......|.|          +.+.  ..+|.+++.+  
T Consensus       437 ~Fv~vn~~~vviAS-~e~~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~s--  513 (1189)
T KOG2041|consen  437 KFVCVNGICVVIAS-EERYFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCIS--  513 (1189)
T ss_pred             eEEEecceEEEEec-cccEEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCCCcceeeeec--
Confidence                 022333333 33466676554432222211   10000111122222          0110  1156666665  


Q ss_pred             CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC---CCeeEE-EecCCccce
Q psy10942        424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK---TSTCVS-TFDKHALKI  499 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~---~~~~~~-~~~~~~~~i  499 (537)
                      .++|..+-..|.|+-|.+.+.-....+. -...+++++.+-+...+|.-..-|.+.+.|+.   +|..+. .+......|
T Consensus       514 dk~l~vareSG~I~rySl~nv~l~n~y~-~n~~~y~~~lNCnstRlAiId~~gv~tf~dLd~d~~g~ql~~~~~~errDV  592 (1189)
T KOG2041|consen  514 DKFLMVARESGGIYRYSLNNVVLTNSYP-VNPSIYSIKLNCNSTRLAIIDLVGVVTFQDLDYDFDGDQLKLIYTSERRDV  592 (1189)
T ss_pred             ceEEEEEeccCceEEEEecceeeeeccc-cCchheeEeeccCcchhhhhhhhceeeeeecccccCcceeeeeehhhhhhh
Confidence            5689999999999999999876666554 34568888888888888888888888888775   344444 233333455


Q ss_pred             eccCCCCCCccccccceeeecCCCE
Q psy10942        500 RNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                                 +++   .|..|...
T Consensus       593 -----------Wd~---~Wa~dNp~  603 (1189)
T KOG2041|consen  593 -----------WDY---EWAQDNPN  603 (1189)
T ss_pred             -----------hhh---hhccCCch
Confidence                       666   67666543

>KOG1409|consensus

Probab=99.25  E-value=9.2e-10  Score=94.43  Aligned_cols=237  Identities=16%  Similarity=0.228  Sum_probs=160.3

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc---ccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG---IFVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                      ||  .+.++..   ..-|...-+++.+.|.+++  +|--.+..+-...   .+..+...+..+...  ..|+.|-..|++
T Consensus        22 G~--~d~vn~~---~l~~~e~gv~~~s~drtvr--v~lkrds~q~wpsI~~~mP~~~~~~~y~~e~--~~L~vg~~ngtv   92 (404)
T KOG1409|consen   22 GS--QDDVNAA---ILIPKEEGVISVSEDRTVR--VWLKRDSGQYWPSIYHYMPSPCSAMEYVSES--RRLYVGQDNGTV   92 (404)
T ss_pred             Cc--hhhhhhh---eeccCCCCeEEccccceee--eEEeccccccCchhhhhCCCCceEeeeeccc--eEEEEEEecceE
Confidence            88  8888877   7778888899999999999  9976664321111   111111222222221  688899999999


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe---cCCCC----EEEE
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG---HKKGT----QIVS  370 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~----~l~~  370 (537)
                      .-+.+...-..... .+....|...+..+-|+.....+++.+.|..+. |.....+..+.....   ..+..    +...
T Consensus        93 tefs~sedfnkm~~-~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~-~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fv  170 (404)
T KOG1409|consen   93 TEFALSEDFNKMTF-LKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFA-WHCTESGNRLGGYNFETPASALQFDALYAFV  170 (404)
T ss_pred             EEEEhhhhhhhcch-hhhhhhhhcceeeEEecCCceeEEEeccccceE-EEeeccCCcccceEeeccCCCCceeeEEEEe
Confidence            98876543332222 556678999999999999889999999887654 333212222211111   01111    3334


Q ss_pred             EcCCCcEEEEEC--CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce-ee
Q psy10942        371 TGADGLLKLWSI--KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV-CL  447 (537)
Q Consensus       371 ~~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~  447 (537)
                      |...|.+....+  ..-..+.++.+|..                 .+.+++|.|..+.|.+|..|..+.+||+.-.+ ..
T Consensus       171 Gd~~gqvt~lr~~~~~~~~i~~~~~h~~-----------------~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~  233 (404)
T KOG1409|consen  171 GDHSGQITMLKLEQNGCQLITTFNGHTG-----------------EVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA  233 (404)
T ss_pred             cccccceEEEEEeecCCceEEEEcCccc-----------------ceEEEEEcCCCcEEEeccccCceEEEeccCCccee
Confidence            444444444332  23344555555554                 78888999999999999999999999997543 45


Q ss_pred             eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       448 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      .++.+|...|..+..-+--+.|.+++.||.|.+|+.+.
T Consensus       234 ~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  234 YELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             eeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence            67788999999998888888999999999999999853

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=4.7e-09  Score=101.78  Aligned_cols=195  Identities=12%  Similarity=0.023  Sum_probs=122.6

Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCce-ee-------EEEEecCC
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLK-LL-------NVLRGHKK  364 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~-~~-------~~~~~~~~  364 (537)
                      .|.++|.++...      ..+..+...+....|+|||+.|+..+.+   ..|.+||+..+.. .+       .....+++
T Consensus       180 ~l~~~d~~g~~~------~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpD  253 (430)
T PRK00178        180 TLQRSDYDGARA------VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPD  253 (430)
T ss_pred             EEEEECCCCCCc------eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCC
Confidence            477778776542      2233456778999999999998876543   3688899873321 11       12345667


Q ss_pred             CCEEE-EEcCCC--cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C--CcEEE
Q psy10942        365 GTQIV-STGADG--LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D--ATIKL  438 (537)
Q Consensus       365 ~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d--g~i~i  438 (537)
                      |+.++ +...++  .|.++|+.+++... +..+..                 ......|+|||+.|+..+. +  ..|++
T Consensus       254 G~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~-----------------~~~~~~~spDg~~i~f~s~~~g~~~iy~  315 (430)
T PRK00178        254 GSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPA-----------------IDTEPFWGKDGRTLYFTSDRGGKPQIYK  315 (430)
T ss_pred             CCEEEEEEccCCCceEEEEECCCCCeEE-cccCCC-----------------CcCCeEECCCCCEEEEEECCCCCceEEE
Confidence            87776 444454  57888988775432 222221                 2344678899887776654 3  35777


Q ss_pred             EECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC-C--cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942        439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-G--LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g--~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                      +|+.+++... +...........|+|||++|+..+.+ +  .|.+||+.+++.. .+.. ....           ...  
T Consensus       316 ~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~-----------~~p--  379 (430)
T PRK00178        316 VNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLD-----------ESP--  379 (430)
T ss_pred             EECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCC-----------CCc--
Confidence            7887766433 22122233457899999999877653 3  4888999887643 3321 1122           345  


Q ss_pred             eeeecCCCEEEEEeCC
Q psy10942        516 QLCSRNSDCEYRGGWS  531 (537)
Q Consensus       516 ~~~s~~~~~l~s~~~d  531 (537)
                       .|+|||+.|+..+.+
T Consensus       380 -~~spdg~~i~~~~~~  394 (430)
T PRK00178        380 -SVAPNGTMLIYATRQ  394 (430)
T ss_pred             -eECCCCCEEEEEEec
Confidence             899999998766543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.18  E-value=2.6e-09  Score=95.70  Aligned_cols=179  Identities=9%  Similarity=-0.055  Sum_probs=122.9

Q ss_pred             eeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc-eEEeeecccee
Q psy10942         10 VIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS-LLHYYETSAVK   88 (537)
Q Consensus        10 ~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~wd~~~~~   88 (537)
                      |++ .+|++++..++.. ..|.+...+- ...+++...+.-..+..          +..-++.|..|| .|-++|..+++
T Consensus       327 fa~-~~Gd~ia~VSRGk-aFi~~~~~~~-~iqv~~~~~VrY~r~~~----------~~e~~vigt~dgD~l~iyd~~~~e  393 (668)
T COG4946         327 FAV-VNGDYIALVSRGK-AFIMRPWDGY-SIQVGKKGGVRYRRIQV----------DPEGDVIGTNDGDKLGIYDKDGGE  393 (668)
T ss_pred             hcc-CCCcEEEEEecCc-EEEECCCCCe-eEEcCCCCceEEEEEcc----------CCcceEEeccCCceEEEEecCCce
Confidence            443 4778888887754 5555533332 22333333343332222          223577777787 89999999998


Q ss_pred             hhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         89 ELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        89 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      .-+....-+.|.++..+|||++++++.....|.+.|+++           +.....-+...+-|+.+.|+ +++..++.+
T Consensus       394 ~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididn-----------gnv~~idkS~~~lItdf~~~-~nsr~iAYa  461 (668)
T COG4946         394 VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDN-----------GNVRLIDKSEYGLITDFDWH-PNSRWIAYA  461 (668)
T ss_pred             EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecC-----------CCeeEecccccceeEEEEEc-CCceeEEEe
Confidence            777777778999999999999999998888999999999           44444444556678999999 888898887


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                      --++--+..|                 +++|+       ..++.. ..     ..  ...=.+-   +|.||+++|..-+
T Consensus       462 fP~gy~tq~I-----------------klydm-------~~~Kiy~vT-----T~--ta~DfsP---aFD~d~ryLYfLs  507 (668)
T COG4946         462 FPEGYYTQSI-----------------KLYDM-------DGGKIYDVT-----TP--TAYDFSP---AFDPDGRYLYFLS  507 (668)
T ss_pred             cCcceeeeeE-----------------EEEec-------CCCeEEEec-----CC--cccccCc---ccCCCCcEEEEEe
Confidence            7665533446                 88888       665554 33     22  2333455   8899999887544

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.16  E-value=2.4e-07  Score=84.32  Aligned_cols=221  Identities=12%  Similarity=0.075  Sum_probs=134.2

Q ss_pred             CCCeEEEEECCCCceeeeeecccccc--cCCCeEEEEEcCCCCEEEEEe-C-CCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKG--HEKDINCVTVSPNDKLLASGS-L-DKTVKVWSTTGGLKLLNVLRGHKKGTQI  368 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~~~l  368 (537)
                      .+..|.+||..+.+...++.......  ....-..++++|||++|++.. . +..+.+.|+. ..+.+..+.. +++..+
T Consensus        75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~-~~kvv~ei~v-p~~~~v  152 (352)
T TIGR02658        75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE-GKAFVRMMDV-PDCYHI  152 (352)
T ss_pred             CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECC-CCcEEEEEeC-CCCcEE
Confidence            68999999999998765552211100  122335789999999999776 4 6899999999 7888887776 455666


Q ss_pred             EEEcCCCcEE-EEECCCCeeeeeeccCCcceEEE-EEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCC--
Q psy10942        369 VSTGADGLLK-LWSIKTSTCVSTFDKHALKIWTL-AITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTD--  443 (537)
Q Consensus       369 ~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~--  443 (537)
                      +..+.++... +-|-........-.+. ...... .+..+...+...+    .|++ +|+++.+..+ |.|.+.|+..  
T Consensus       153 y~t~e~~~~~~~~Dg~~~~v~~d~~g~-~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~  226 (352)
T TIGR02658       153 FPTANDTFFMHCRDGSLAKVGYGTKGN-PKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGD  226 (352)
T ss_pred             EEecCCccEEEeecCceEEEEecCCCc-eEEeeeeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCc
Confidence            5554433322 2222111100000000 001111 1122111111112    3455 7888877766 9999999643  


Q ss_pred             ---ceeeeEeec-------CCcceEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeeEEEecCCccceeccC
Q psy10942        444 ---YVCLKSLEG-------HDASVLRCHFINKGTQIVSTGA----------DGLLKLWSIKTSTCVSTFDKHALKIRNSD  503 (537)
Q Consensus       444 ---~~~~~~~~~-------~~~~v~~~~~s~~~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~i~~~~  503 (537)
                         .+....+..       ..+.+.-++++|+++.+++...          .+.|.++|..+++.+..+..-. .+    
T Consensus       227 ~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~-~~----  301 (352)
T TIGR02658       227 AKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH-EI----  301 (352)
T ss_pred             ceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC-ce----
Confidence               222222221       2233455999999999888532          2579999999999998886432 45    


Q ss_pred             CCCCCccccccceeeecCCC-EEEEEe-CCCCEEe
Q psy10942        504 SENDHKGFGLPRQLCSRNSD-CEYRGG-WSPQVVV  536 (537)
Q Consensus       504 ~~~~~~~~~~~~~~~s~~~~-~l~s~~-~dg~i~v  536 (537)
                             ..+   +++||++ +|++.. .++.|.+
T Consensus       302 -------~~i---avS~Dgkp~lyvtn~~s~~VsV  326 (352)
T TIGR02658       302 -------DSI---NVSQDAKPLLYALSTGDKTLYI  326 (352)
T ss_pred             -------eeE---EECCCCCeEEEEeCCCCCcEEE
Confidence                   788   9999999 888766 4666654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1064|consensus

Probab=99.16  E-value=3.2e-10  Score=116.82  Aligned_cols=215  Identities=14%  Similarity=0.233  Sum_probs=151.4

Q ss_pred             cceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy10942        274 AEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL  353 (537)
Q Consensus       274 ~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  353 (537)
                      .+.+..|...  .+.++|+.||.+++|....++.+...   . ......|+.+.|+.+|+.+..+..||.+.+|...  .
T Consensus      2211 v~r~~sHp~~--~~Yltgs~dgsv~~~~w~~~~~v~~~---r-t~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~--p 2282 (2439)
T KOG1064|consen 2211 VRRMTSHPSD--PYYLTGSQDGSVRMFEWGHGQQVVCF---R-TAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS--P 2282 (2439)
T ss_pred             eeeecCCCCC--ceEEecCCCceEEEEeccCCCeEEEe---e-ccCcchhhhhhhcccCCceeeeccCCceeecccC--C
Confidence            3444444432  58899999999999999888765432   1 2233889999999999999999999999999987  5


Q ss_pred             eeeEEEEecCC--------CCEEEEEc---CCCcEEEEECCCCe---eeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        354 KLLNVLRGHKK--------GTQIVSTG---ADGLLKLWSIKTST---CVSTFDKHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       354 ~~~~~~~~~~~--------~~~l~~~~---~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                      ++....+.|..        +..+++++   .++.+.+||..-..   .+.  ..|..                 +.++++
T Consensus      2283 k~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~-----------------gaT~l~ 2343 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDG-----------------GATVLA 2343 (2439)
T ss_pred             cceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCC-----------------CceEEE
Confidence            56666666654        23344433   46889999964321   122  33433                 889999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +-|..+.|++|+.+|.|++||++..++++.++.         +. ...++++++..|.++||++..-.+++.+......-
T Consensus      2344 ~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~ 2413 (2439)
T KOG1064|consen 2344 YAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQ 2413 (2439)
T ss_pred             EcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCchhhccc
Confidence            999999999999999999999998877777664         34 56789999999999999998887777765321110


Q ss_pred             eccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        500 RNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                       .. ..+.+  ..    .+--..+.|.+++.||+
T Consensus      2414 -gf-Fr~~g--~Q----~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2414 -GF-FRNIG--MQ----INVGQCNRIFSCGADGT 2439 (2439)
T ss_pred             -ch-hhhcC--ce----eeeccCceEEEecCCCC
Confidence             00 00000  11    23334567888888874

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.16  E-value=1.1e-08  Score=97.98  Aligned_cols=196  Identities=9%  Similarity=-0.086  Sum_probs=114.1

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE---EEEeCCC--cEEEEEccCCceeeE---------EEE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL---ASGSLDK--TVKVWSTTGGLKLLN---------VLR  360 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l---~~~~~d~--~i~i~d~~~~~~~~~---------~~~  360 (537)
                      ..|.+.|.++...      ..+......+..-+|+|||+.+   ++...++  .|++.++.. ++...         ...
T Consensus       165 ~~l~~~d~dG~~~------~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~-g~~~~lt~~~g~~~~p~  237 (428)
T PRK01029        165 GELWSVDYDGQNL------RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLEN-PAGKKILALQGNQLMPT  237 (428)
T ss_pred             ceEEEEcCCCCCc------eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCC-CCceEeecCCCCccceE
Confidence            4677777766543      2233344556788999999752   2444444  477778763 32211         123


Q ss_pred             ecCCCCEEEEEcC-CC----cEEEEECCCC---eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942        361 GHKKGTQIVSTGA-DG----LLKLWSIKTS---TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-  431 (537)
Q Consensus       361 ~~~~~~~l~~~~~-d~----~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  431 (537)
                      ..++|+.|+..+. +|    .+..|++..+   +..........                 .....+|+|||+.|+..+ 
T Consensus       238 wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~-----------------~~~~p~wSPDG~~Laf~s~  300 (428)
T PRK01029        238 FSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFG-----------------TQGNPSFSPDGTRLVFVSN  300 (428)
T ss_pred             ECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCC-----------------CcCCeEECCCCCEEEEEEC
Confidence            4466766665442 22    2333555442   11111111100                 234578999999887765 


Q ss_pred             CCCcEEEE--ECCC-ceeeeEeecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCeeEEEecCCccceeccCCC
Q psy10942        432 GDATIKLW--CLTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTCVSTFDKHALKIRNSDSE  505 (537)
Q Consensus       432 ~dg~i~i~--d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~  505 (537)
                      .+|...+|  ++.. +.....+..+...+....|||||+.|+..+.+   ..|.+||+.+++... +......+      
T Consensus       301 ~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~------  373 (428)
T PRK01029        301 KDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENK------  373 (428)
T ss_pred             CCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCc------
Confidence            35654455  4432 23344455455567889999999999877653   369999998887643 33223334      


Q ss_pred             CCCccccccceeeecCCCEEEEEe
Q psy10942        506 NDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       506 ~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                           ...   .|+|||+.|+...
T Consensus       374 -----~~p---~wSpDG~~L~f~~  389 (428)
T PRK01029        374 -----ESP---SWAIDSLHLVYSA  389 (428)
T ss_pred             -----cce---EECCCCCEEEEEE
Confidence                 556   9999999887543

>KOG1064|consensus

Probab=99.14  E-value=2.1e-10  Score=118.07  Aligned_cols=198  Identities=13%  Similarity=0.194  Sum_probs=141.8

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee-cchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ..|.+|.=.|...+.++|+.||.+++|....+           +.+..++ .....|+.+.|+ ..++...++.++++  
T Consensus      2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~-----------~~v~~~rt~g~s~vtr~~f~-~qGnk~~i~d~dg~-- 2274 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHG-----------QQVVCFRTAGNSRVTRSRFN-HQGNKFGIVDGDGD-- 2274 (2439)
T ss_pred             CceeeecCCCCCceEEecCCCceEEEEeccCC-----------CeEEEeeccCcchhhhhhhc-ccCCceeeeccCCc--
Confidence            56888888899999999999999999998873           3333333 334779999999 77787777777777  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                        +                 .+|..       ...-.. .+     .|  ......+   .|-.  ..+++++..     
T Consensus      2275 --l-----------------~l~q~-------~pk~~~s~q-----ch--nk~~~Df---~Fi~--s~~~tag~s----- 2311 (2439)
T KOG1064|consen 2275 --L-----------------SLWQA-------SPKPYTSWQ-----CH--NKALSDF---RFIG--SLLATAGRS----- 2311 (2439)
T ss_pred             --e-----------------eeccc-------CCcceeccc-----cC--Cccccce---eeee--hhhhccccC-----
Confidence              9                 99998       422222 33     66  6666666   5543  334433211     


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                                                           +.++.+.+||..-.....-  .  -..|.+.++++++.|..++
T Consensus      2312 -------------------------------------~d~~n~~lwDtl~~~~~s~--v--~~~H~~gaT~l~~~P~~ql 2350 (2439)
T KOG1064|consen 2312 -------------------------------------SDNRNVCLWDTLLPPMNSL--V--HTCHDGGATVLAYAPKHQL 2350 (2439)
T ss_pred             -------------------------------------CCCCcccchhcccCcccce--e--eeecCCCceEEEEcCcceE
Confidence                                                 1123444444322111110  1  1578999999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  393 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  393 (537)
                      |++|+.+|.|++||++ ..+.+..+..-....++++++..|.++||++.....+.++..
T Consensus      2351 lisggr~G~v~l~D~r-qrql~h~~~~~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2351 LISGGRKGEVCLFDIR-QRQLRHTFQALDTREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred             EEecCCcCcEEEeehH-HHHHHHHhhhhhhhheeeccCcccceEEEEccccchhhcCch
Confidence            9999999999999999 777766666544788999999999999999998877777654

>KOG0280|consensus

Probab=99.11  E-value=1.1e-08  Score=85.99  Aligned_cols=215  Identities=13%  Similarity=0.132  Sum_probs=134.6

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccC---CCeEEEEEcCCCCEEEEEeCCCcEEEEEcc-CCceeeEEEEecC
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE---KDINCVTVSPNDKLLASGSLDKTVKVWSTT-GGLKLLNVLRGHK  363 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~  363 (537)
                      ++-+...|.|.++..........  ...+....   ....++.|++.+..++++..+|.+.+-+.. ...+.++..+.|.
T Consensus        88 l~~a~a~G~i~~~r~~~~~ss~~--L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He  165 (339)
T KOG0280|consen   88 LLDAHARGQIQLYRNDEDESSVH--LRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHE  165 (339)
T ss_pred             eeeccccceEEEEeeccceeeee--ecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccc
Confidence            44455567788887654433211  11111111   124578899999999999999998855443 1112222333332


Q ss_pred             -----------CCCEEEEEcCCCcEEEEECC-CCeeeee-eccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEE
Q psy10942        364 -----------KGTQIVSTGADGLLKLWSIK-TSTCVST-FDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILIS  429 (537)
Q Consensus       364 -----------~~~~l~~~~~d~~i~i~d~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~  429 (537)
                                 +.+.+.+|+.|+.+..||++ .++.+.. .+.|..                 +|.++.-+| ...++++
T Consensus       166 ~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~-----------------GV~SI~ss~~~~~~I~T  228 (339)
T KOG0280|consen  166 FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTS-----------------GVVSIYSSPPKPTYIAT  228 (339)
T ss_pred             eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeec-----------------ceEEEecCCCCCceEEE
Confidence                       36889999999999999999 3333332 233333                 666776665 4789999


Q ss_pred             EeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecC--CCEEEEEeCCCcEEEEECCCCe-----eEEEecCCccceec
Q psy10942        430 SSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINK--GTQIVSTGADGLLKLWSIKTST-----CVSTFDKHALKIRN  501 (537)
Q Consensus       430 ~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~v~vwd~~~~~-----~~~~~~~~~~~i~~  501 (537)
                      |+.|..|++||.++ ++++..-. -.+.|..+.++|.  ++.|+++-..| .+|-+.+.+.     .......|.+-.  
T Consensus       229 GsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~--  304 (339)
T KOG0280|consen  229 GSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLC--  304 (339)
T ss_pred             eccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeecccccccee--
Confidence            99999999999985 66666555 3478999999994  34455555454 7777776543     223444565555  


Q ss_pred             cCCCCCCccccccceeeecCCCEEEEEe-CCCCEE-eC
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSDCEYRGG-WSPQVV-VY  537 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~i~-vW  537 (537)
                               ..-   .|......|||++ .|+.++ +|
T Consensus       305 ---------YG~---DWd~~~~~lATCsFYDk~~~~~W  330 (339)
T KOG0280|consen  305 ---------YGG---DWDSKDSFLATCSFYDKKIRQLW  330 (339)
T ss_pred             ---------ecc---ccccccceeeeeeccccceeeee
Confidence                     444   5644445678753 466654 55

>KOG4190|consensus

Probab=99.09  E-value=4.3e-10  Score=102.45  Aligned_cols=215  Identities=12%  Similarity=0.118  Sum_probs=148.7

Q ss_pred             ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                      ...+.||  ...|..+   +--.+.+-+++++.|++++  +|.+......                              
T Consensus       728 L~nf~GH--~~~iRai---~AidNENSFiSASkDKTVK--LWSik~EgD~------------------------------  770 (1034)
T KOG4190|consen  728 LCNFTGH--QEKIRAI---AAIDNENSFISASKDKTVK--LWSIKPEGDE------------------------------  770 (1034)
T ss_pred             eecccCc--HHHhHHH---HhcccccceeeccCCceEE--EEEeccccCc------------------------------
Confidence            3345588  7777777   6556667778888888888  8877663211                              


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC------------
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK------------  363 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------  363 (537)
                            ..+...     ..++..|..+|.++.|-.+-+++++  -||.|++||.- -+.++..+...+            
T Consensus       771 ------~~tsaC-----QfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlWDPF-igr~Laq~~dapk~~a~~~ikcl~  836 (1034)
T KOG4190|consen  771 ------IGTSAC-----QFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLWDPF-IGRLLAQMEDAPKEGAGGNIKCLE  836 (1034)
T ss_pred             ------ccccee-----eeEhhhccCcccceeeeeccceeee--ccCcceeeccc-ccchhHhhhcCcccCCCceeEecc
Confidence                  011111     4456789999999999998887776  47889999976 333333222211            


Q ss_pred             --CCCEEE-EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        364 --KGTQIV-STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       364 --~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                        +...++ -++...+++++|.+.++....++.-..+      -|++      -+.+++..|.|+.++.+-.+|.|.+.|
T Consensus       837 nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~------~Pna------~~R~iaVa~~GN~lAa~LSnGci~~LD  904 (1034)
T KOG4190|consen  837 NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP------GPNA------LTRAIAVADKGNKLAAALSNGCIAILD  904 (1034)
T ss_pred             cCcchheeeeccchhhheeeecccccceeeEEeccCC------CCch------heeEEEeccCcchhhHHhcCCcEEEEe
Confidence              122333 4478899999999988766555322111      1111      567888999999999999999999999


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEE-EECCCCeeEEEecC
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL-WSIKTSTCVSTFDK  494 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~v-wd~~~~~~~~~~~~  494 (537)
                      .++|+.+..++...-....++- |..+.|+....|.++.+ |...+|....+.+.
T Consensus       905 aR~G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhaldgimh~q~kp  958 (1034)
T KOG4190|consen  905 ARNGKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHALDGIMHLQDKP  958 (1034)
T ss_pred             cCCCceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhcCCeeeeccCC
Confidence            9999999888876666665553 55678888888999999 98877766555543

>KOG2041|consensus

Probab=99.08  E-value=6.8e-09  Score=97.78  Aligned_cols=278  Identities=12%  Similarity=0.016  Sum_probs=180.8

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc------ccccccceeeeeeCCcc--------eEEEE
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG------IFVPEAEHGAFYTGGTV--------ELLAS  290 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~------~~~~~~~~~~~~~~~~v--------~~l~~  290 (537)
                      .....|+   .|+....+++.|+.||.++  +-.+.+.......      ......+++.+|...-.        ..+-+
T Consensus        14 nvkL~c~---~WNke~gyIAcgG~dGlLK--VlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTt   88 (1189)
T KOG2041|consen   14 NVKLHCA---EWNKESGYIACGGADGLLK--VLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTT   88 (1189)
T ss_pred             CceEEEE---EEcccCCeEEeccccceeE--EEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccc
Confidence            4667899   9999999999999999999  8877664322111      01112445666665211        66778


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc--------CCceeeEEEEec
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT--------GGLKLLNVLRGH  362 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~~~~  362 (537)
                      ...+|.|.+|-+-.+......   .-....+.|.+|.|..||..++....||.|.+=.+.        -.+..+......
T Consensus        89 SDt~GlIiVWmlykgsW~EEM---iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws  165 (1189)
T KOG2041|consen   89 SDTSGLIIVWMLYKGSWCEEM---INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWS  165 (1189)
T ss_pred             cCCCceEEEEeeecccHHHHH---hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeec
Confidence            889999999998776542211   122345678999999999999999999888654444        233444445556


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE-EEEEecCCCceEEeeeeEEEE--------cCCCCEEEEEeCC
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW-TLAITKDENQIITGGVWFVNF--------SPLDRILISSSGD  433 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~i~~~~~--------s~~~~~l~~~~~d  433 (537)
                      ++...++.+-.+|.++++|-+..-..+ +.... .|. .-.++.-+.     .|..+.|        -||...|+++..+
T Consensus       166 ~D~~~~Lf~~ange~hlydnqgnF~~K-l~~~c-~Vn~tg~~s~~~~-----kia~i~w~~g~~~~v~pdrP~lavcy~n  238 (1189)
T KOG2041|consen  166 EDLEQALFKKANGETHLYDNQGNFERK-LEKDC-EVNGTGIFSNFPT-----KIAEIEWNTGPYQPVPPDRPRLAVCYAN  238 (1189)
T ss_pred             ccHHHHHhhhcCCcEEEecccccHHHh-hhhce-EEeeeeeecCCCc-----cccceeeccCccccCCCCCCEEEEEEcC
Confidence            666777777778999999876431110 00000 000 001111111     1222222        3688899999999


Q ss_pred             CcEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEEEEEeCC---------CcEEEEECCCCeeEEEecCCccceeccC
Q psy10942        434 ATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---------GLLKLWSIKTSTCVSTFDKHALKIRNSD  503 (537)
Q Consensus       434 g~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~~~~~i~~~~  503 (537)
                      |.+++..-.+ .+++..-.  .-.+....|+++|..||.++.|         +.|.+|.. -|+.+.+++.....|    
T Consensus       239 Gr~QiMR~eND~~Pvv~dt--gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~I----  311 (1189)
T KOG2041|consen  239 GRMQIMRSENDPEPVVVDT--GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCI----  311 (1189)
T ss_pred             ceehhhhhcCCCCCeEEec--ccEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCcee----
Confidence            9999875444 33332222  2568899999999999999864         35777764 688888898888888    


Q ss_pred             CCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        504 SENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       504 ~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                             +++   +|-..|-.+|.+ .|+.|.
T Consensus       312 -------t~l---sWEg~gLriA~A-vdsfiy  332 (1189)
T KOG2041|consen  312 -------TGL---SWEGTGLRIAIA-VDSFIY  332 (1189)
T ss_pred             -------eee---EEcCCceEEEEE-ecceEE
Confidence                   888   887777676655 355543

>KOG4532|consensus

Probab=99.04  E-value=8.1e-08  Score=79.92  Aligned_cols=230  Identities=12%  Similarity=0.028  Sum_probs=143.5

Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc--eEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV--ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      ...+||.|+.-|...  +|...+.+...... ........-|...+.  ..+..++.|.++++.+++.+....       
T Consensus        83 kc~~la~gG~~g~fd--~~~~~tn~~h~~~c-d~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~-------  152 (344)
T KOG4532|consen   83 KCVTLADGGASGQFD--LFACNTNDGHLYQC-DVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKF-------  152 (344)
T ss_pred             cccEEEeccccceee--eecccCcccceeee-cccccchhhhhhhcccccceeeccCCcceeEEEEecCcccc-------
Confidence            345888998999999  99988643321110 000111111111111  356677888888888887664321       


Q ss_pred             cccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        317 KGHEK--DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       317 ~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                      ..|..  .+.++++++|++++++.+....|..|.+....+.+..+...+.        .|                    
T Consensus       153 ~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t--------~D--------------------  204 (344)
T KOG4532|consen  153 AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT--------SD--------------------  204 (344)
T ss_pred             eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEeccc--------CC--------------------
Confidence            22322  3789999999999999999999999998754443332221111        00                    


Q ss_pred             CcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee-ee----EeecCCcceEEEEEecCCC--
Q psy10942        395 ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC-LK----SLEGHDASVLRCHFINKGT--  467 (537)
Q Consensus       395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~----~~~~~~~~v~~~~~s~~~~--  467 (537)
                                         .-.+..|+.....+|++..||++.|||++.... ..    +-..|.+.+..+.|++.|.  
T Consensus       205 -------------------~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lD  265 (344)
T KOG4532|consen  205 -------------------HGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLD  265 (344)
T ss_pred             -------------------CceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcce
Confidence                               345567888888999999999999999987332 22    2235889999999998554  


Q ss_pred             EEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        468 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       468 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                      +|...-.-+.+.+-|++++...+.+...++.-   ...+.+-...-   .|+.++.-+.+.+++
T Consensus       266 LLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~---~~~~tq~ifgt---~f~~~n~s~~v~~e~  323 (344)
T KOG4532|consen  266 LLFISEHFSRVHVVDTRNYVNHQVIVIPDDVE---RKHNTQHIFGT---NFNNENESNDVKNEL  323 (344)
T ss_pred             EEEEecCcceEEEEEcccCceeeEEecCcccc---ccccccccccc---cccCCCcccccccch
Confidence            44444445779999999987766654333220   00011111555   677777766665543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.04  E-value=6e-06  Score=86.04  Aligned_cols=201  Identities=12%  Similarity=0.017  Sum_probs=124.1

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEE----EcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTW----DLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iw----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      .|.++.|.  +|...++.+.++|.|.+.    +..+.+.-..-.....|.++  .|+|        |..+++.++.++.|
T Consensus        77 ~ivs~~yl--~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~--~WSP--------D~Ella~vT~~~~l  144 (928)
T PF04762_consen   77 KIVSFQYL--ADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAA--SWSP--------DEELLALVTGEGNL  144 (928)
T ss_pred             cEEEEEec--cCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEE--EECC--------CcCEEEEEeCCCEE
Confidence            58888899  788889999899999998    55444332222345677778  7899        66677776667776


Q ss_pred             Eeeecc----c-------------------eehhhhc---------------C----------CCcceEEEEEeccccEE
Q psy10942         80 HYYETS----A-------------------VKELYQH---------------G----------LSSPLVRIVRSSVKRMY  111 (537)
Q Consensus        80 ~~wd~~----~-------------------~~~~~~~---------------~----------~~~~v~~~~~s~~~~~l  111 (537)
                      .+-+-.    .                   |+.-..+               .          ..+.-..++|-.||+|+
T Consensus       145 ~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yF  224 (928)
T PF04762_consen  145 LLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYF  224 (928)
T ss_pred             EEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEE
Confidence            665320    0                   1110110               0          11245678899999999


Q ss_pred             EEEeC---C---ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecc
Q psy10942        112 AVVTA---D---HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLG  185 (537)
Q Consensus       112 a~~~~---d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~  185 (537)
                      |+.+-   .   ..++||+-++            .+..+-+.-.+--.+++|. |.++.+++.....+ ...|       
T Consensus       225 AVss~~~~~~~~R~iRVy~ReG------------~L~stSE~v~gLe~~l~Wr-PsG~lIA~~q~~~~-~~~V-------  283 (928)
T PF04762_consen  225 AVSSVEPETGSRRVIRVYSREG------------ELQSTSEPVDGLEGALSWR-PSGNLIASSQRLPD-RHDV-------  283 (928)
T ss_pred             EEEEEEcCCCceeEEEEECCCc------------eEEeccccCCCccCCccCC-CCCCEEEEEEEcCC-CcEE-------
Confidence            98874   2   5799999775            3333333223334578998 77787766654222 1123       


Q ss_pred             cCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCC
Q psy10942        186 ANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYH  263 (537)
Q Consensus       186 ~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~  263 (537)
                                .+|.-       +..+.- +.. ++...  ...|..+   .|++|+..||..-.|. |.  +|...+..
T Consensus       284 ----------vFfEr-------NGLrhgeF~l-~~~~~--~~~v~~l---~Wn~ds~iLAv~~~~~-vq--LWt~~NYH  336 (928)
T PF04762_consen  284 ----------VFFER-------NGLRHGEFTL-RFDPE--EEKVIEL---AWNSDSEILAVWLEDR-VQ--LWTRSNYH  336 (928)
T ss_pred             ----------EEEec-------CCcEeeeEec-CCCCC--CceeeEE---EECCCCCEEEEEecCC-ce--EEEeeCCE
Confidence                      33332       211111 110 00133  6789999   9999999999877655 88  99988753

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.01  E-value=2.3e-08  Score=84.83  Aligned_cols=247  Identities=15%  Similarity=0.158  Sum_probs=154.6

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccc-c--ccc---------------cccceeeeeeCCcce
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLF-G--IFV---------------PEAEHGAFYTGGTVE  286 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~-~--~~~---------------~~~~~~~~~~~~~v~  286 (537)
                      ...|+++   .|...|.|+++|...|.+.  ++.......-.. .  .++               ..+..+.........
T Consensus        26 ad~ItaV---efd~tg~YlatGDkgGRVv--lfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~  100 (460)
T COG5170          26 ADKITAV---EFDETGLYLATGDKGGRVV--LFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRN  100 (460)
T ss_pred             cceeeEE---EeccccceEeecCCCceEE--EeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcc
Confidence            5678999   9999999999999999998  887665321000 0  000               001111122222226


Q ss_pred             EEEEEeCCCeEEEEECCCCcee----------------------eeee---------------cc-cccccCCCeEEEEE
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKL----------------------LNVL---------------RG-HKKGHEKDINCVTV  328 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~----------------------~~~~---------------~~-~~~~~~~~v~~~~~  328 (537)
                      .++..+.|.+|++|.+......                      ..+.               .+ ....|.--|.++.|
T Consensus       101 hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~  180 (460)
T COG5170         101 HFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISF  180 (460)
T ss_pred             eEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeee
Confidence            7778888999999987543100                      0000               00 11456677899999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC-----------------C-CCEEEEEcCCCcEEEEECCCCeee--
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK-----------------K-GTQIVSTGADGLLKLWSIKTSTCV--  388 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------------~-~~~l~~~~~d~~i~i~d~~~~~~~--  388 (537)
                      ..|...++++ .|-.|.+|++.............|                 . ...+...+..|.|++-|++.....  
T Consensus       181 NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn  259 (460)
T COG5170         181 NSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDN  259 (460)
T ss_pred             cCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccC
Confidence            9888887775 577899999875444433333332                 2 567788888999999999854321  


Q ss_pred             --eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCC-----------
Q psy10942        389 --STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHD-----------  454 (537)
Q Consensus       389 --~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~-----------  454 (537)
                        ..+.....++.     .+.-.-+...|..+.|+++|+++++-+. -++++||.+. ..++.++.-|.           
T Consensus       260 ~~klfe~~~D~v~-----~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YE  333 (460)
T COG5170         260 SKKLFELTIDGVD-----VDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYE  333 (460)
T ss_pred             chhhhhhccCccc-----chhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhh
Confidence              11111111110     0000011226889999999999998765 5899999875 45666665443           


Q ss_pred             -cce---EEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        455 -ASV---LRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       455 -~~v---~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                       ..|   ..+.||.|.+.+.+|+..+..-+|-.
T Consensus       334 nDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~  366 (460)
T COG5170         334 NDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT  366 (460)
T ss_pred             ccceeeeEEEEecCCcccccccccccceeeecc
Confidence             222   35788999999999998887777753

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.99  E-value=2.5e-06  Score=74.75  Aligned_cols=226  Identities=9%  Similarity=0.091  Sum_probs=145.1

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCC-cee------------eE
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGG-LKL------------LN  357 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~-~~~------------~~  357 (537)
                      +.-|++|++.+..-...  ...+..+.+..+-|+|+|+.+.|+++..+   |.|--|.+... +.+            ..
T Consensus        15 s~gI~v~~ld~~~g~l~--~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~   92 (346)
T COG2706          15 SQGIYVFNLDTKTGELS--LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPC   92 (346)
T ss_pred             CCceEEEEEeCcccccc--hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCe
Confidence            56799999885443222  22234556778999999999999987654   66777766621 111            12


Q ss_pred             EEEecCCCCEEEEEcC-CCcEEEEECCC-Ceeee--eeccCCcc----------eEEEEEecCCCceEEe----------
Q psy10942        358 VLRGHKKGTQIVSTGA-DGLLKLWSIKT-STCVS--TFDKHALK----------IWTLAITKDENQIITG----------  413 (537)
Q Consensus       358 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~-~~~~~--~~~~~~~~----------i~~~~~~~~~~~~~~~----------  413 (537)
                      -+...+++++++++.. .|.|.++-++. |....  ....|...          +....++|+++.++..          
T Consensus        93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y  172 (346)
T COG2706          93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY  172 (346)
T ss_pred             EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence            3334456777777764 58899998865 32211  11122222          6677888999877752          


Q ss_pred             -------------------eeeEEEEcCCCCEEEEEeC-CCcEEEEECCCc-eeeeEeecC---------CcceEEEEEe
Q psy10942        414 -------------------GVWFVNFSPLDRILISSSG-DATIKLWCLTDY-VCLKSLEGH---------DASVLRCHFI  463 (537)
Q Consensus       414 -------------------~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~~~~---------~~~v~~~~~s  463 (537)
                                         +...|.|+|++++..+..+ +++|.+|..... ..+..++.+         ......|..+
T Consensus       173 ~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis  252 (346)
T COG2706         173 DLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHIS  252 (346)
T ss_pred             EcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEEC
Confidence                               4778999999999887765 789999998763 223333221         2346788999


Q ss_pred             cCCCEEEEEeC-CCcEEEEECCCC-eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942        464 NKGTQIVSTGA-DGLLKLWSIKTS-TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       464 ~~~~~l~s~~~-dg~v~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                      +||++|.++.. ...|.++.+... ..+........        ....++..   .|+++|++|++++.++
T Consensus       253 ~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~t--------eg~~PR~F---~i~~~g~~Liaa~q~s  312 (346)
T COG2706         253 PDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPT--------EGQFPRDF---NINPSGRFLIAANQKS  312 (346)
T ss_pred             CCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEecc--------CCcCCccc---eeCCCCCEEEEEccCC
Confidence            99999998754 346888877543 22222211111        01112777   9999999999988765

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.98  E-value=4.8e-07  Score=95.88  Aligned_cols=241  Identities=10%  Similarity=0.039  Sum_probs=141.0

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeeccccc---------ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCcee
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---------GHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKL  355 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~  355 (537)
                      ..+++-..++.|+++|..+... ...-.....         ..-.....++++++++.|+++.. ++.|+.+|+.. .. 
T Consensus       581 ~lyVaDs~n~rI~v~d~~G~~i-~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~-~~-  657 (1057)
T PLN02919        581 RLFISDSNHNRIVVTDLDGNFI-VQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN-ET-  657 (1057)
T ss_pred             eEEEEECCCCeEEEEeCCCCEE-EEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCC-CE-
Confidence            4666777788899999865432 111000000         11223578999998887766554 46788888762 22 


Q ss_pred             eEE---------------------------EEecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec-C
Q psy10942        356 LNV---------------------------LRGHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK-D  406 (537)
Q Consensus       356 ~~~---------------------------~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~  406 (537)
                      +..                           +..++ ++..+++...++.|++||..++... .+.+.....   .... .
T Consensus       658 V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~---~~~g~~  733 (1057)
T PLN02919        658 VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYER---NLNGSS  733 (1057)
T ss_pred             EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccc---cCCCCc
Confidence            211                           22233 3556677777889999998876543 221110000   0000 0


Q ss_pred             CCceEEeeeeEEEEcCCCCEEE-EEeCCCcEEEEECCCceeeeEeec-------------C--------CcceEEEEEec
Q psy10942        407 ENQIITGGVWFVNFSPLDRILI-SSSGDATIKLWCLTDYVCLKSLEG-------------H--------DASVLRCHFIN  464 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~-------------~--------~~~v~~~~~s~  464 (537)
                      ...........++++|+++.|+ +-..++.|++||+.++.......+             +        -.....+++++
T Consensus       734 ~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~  813 (1057)
T PLN02919        734 GTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAK  813 (1057)
T ss_pred             cccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeC
Confidence            0000012567799999998555 445678999999987543211100             0        11246899999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccc-eec--cCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK-IRN--SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-i~~--~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|.++++-+.++.|++||..++...... +.... ...  .....-..+..+   +++++|+++++-+.++.|++|
T Consensus       814 dG~LYVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GI---avd~dG~lyVaDt~Nn~Irvi  885 (1057)
T PLN02919        814 DGQIYVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGL---ALGENGRLFVADTNNSLIRYL  885 (1057)
T ss_pred             CCcEEEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEE---EEeCCCCEEEEECCCCEEEEE
Confidence            9998888888999999999887655332 21100 000  000001123667   999999988888888999886

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.94  E-value=2.2e-07  Score=98.39  Aligned_cols=75  Identities=11%  Similarity=0.022  Sum_probs=59.2

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee-------------cCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE-------------GHDASVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                      ....++++++|+++++-..++.|++||..++.......             +.-.....++++++|+++++-+.++.|++
T Consensus       805 ~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irv  884 (1057)
T PLN02919        805 HPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRY  884 (1057)
T ss_pred             CCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEE
Confidence            34568899999988888889999999998766543221             11224678999999998888889999999


Q ss_pred             EECCCCee
Q psy10942        481 WSIKTSTC  488 (537)
Q Consensus       481 wd~~~~~~  488 (537)
                      ||+.+++.
T Consensus       885 id~~~~~~  892 (1057)
T PLN02919        885 LDLNKGEA  892 (1057)
T ss_pred             EECCCCcc
Confidence            99988765

>KOG3914|consensus

Probab=98.91  E-value=1.8e-08  Score=88.71  Aligned_cols=152  Identities=23%  Similarity=0.278  Sum_probs=101.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---eeeEEEEecCCCCEEEEEcC------------CCcEEEEECCCCee
Q psy10942        323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGL---KLLNVLRGHKKGTQIVSTGA------------DGLLKLWSIKTSTC  387 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~  387 (537)
                      ...+..+|.++++|++..+....++++....   ++............+-....            ...+.+|....+.+
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~  144 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC  144 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence            3455667788888888887777777766333   22333322222222222222            23333333333222


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe-ecCCcceEEEEEecCC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-EGHDASVLRCHFINKG  466 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~  466 (537)
                       ..+-+|-.                 .++.++++||+++++++..|..|++-.+...-.+..+ -||..-|..++.-++ 
T Consensus       145 -~~~lGhvS-----------------ml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-  205 (390)
T KOG3914|consen  145 -EPILGHVS-----------------MLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-  205 (390)
T ss_pred             -chhhhhhh-----------------hhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-
Confidence             12223332                 6889999999999999999999999888776556555 469999999998766 


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        467 TQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      ..|+++|.|+++++||+.+|+++..+.
T Consensus       206 ~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  206 YLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             ceeeecCCCCcEEEEecccCCcccccc
Confidence            468999999999999999999886654

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.86  E-value=1.2e-08  Score=60.81  Aligned_cols=39  Identities=23%  Similarity=0.616  Sum_probs=37.2

Q ss_pred             ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      ++++.++++|.+.|++++|+|++.+|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            468899999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.86  E-value=2e-06  Score=82.38  Aligned_cols=310  Identities=9%  Similarity=0.015  Sum_probs=160.8

Q ss_pred             ccCCcceEEEecCcceEEEEEcCccceeeeecccccccee------eeEeecCccccccCCcEEEEEeCccceEEeeecc
Q psy10942         12 PQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETC------AVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS   85 (537)
Q Consensus        12 ~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~   85 (537)
                      |.-.+..++.++.+|.|.-+|.++|+.+-+.+........      .+...|.    .  .+..++.++.++.|..+|.+
T Consensus        65 Pvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~----v--~~~~v~v~~~~g~l~ald~~  138 (394)
T PRK11138         65 PAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVT----V--AGGKVYIGSEKGQVYALNAE  138 (394)
T ss_pred             cEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccE----E--ECCEEEEEcCCCEEEEEECC
Confidence            3345667888888899999999999988766533210000      0000000    0  12356667778999999999


Q ss_pred             ceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-hhcccC-CCc
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-IALLGE-EDS  163 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~-~~~  163 (537)
                      +|+.+.+....+.+.+--.-.+ ..+++++.++.+.-+|..+           ++.+-........... ..-+|- .++
T Consensus       139 tG~~~W~~~~~~~~~ssP~v~~-~~v~v~~~~g~l~ald~~t-----------G~~~W~~~~~~~~~~~~~~~sP~v~~~  206 (394)
T PRK11138        139 DGEVAWQTKVAGEALSRPVVSD-GLVLVHTSNGMLQALNESD-----------GAVKWTVNLDVPSLTLRGESAPATAFG  206 (394)
T ss_pred             CCCCcccccCCCceecCCEEEC-CEEEEECCCCEEEEEEccC-----------CCEeeeecCCCCcccccCCCCCEEECC
Confidence            9999988887654433211123 4566677889999999988           4555444322110000 000110 122


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCccc--CCC
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVK--EED  241 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~--~~~  241 (537)
                      .+++++.++.    +   ..+......     .+|..       +..... .     .+. ......+   ..+|  .+.
T Consensus       207 ~v~~~~~~g~----v---~a~d~~~G~-----~~W~~-------~~~~~~-~-----~~~-~~~~~~~---~~sP~v~~~  257 (394)
T PRK11138        207 GAIVGGDNGR----V---SAVLMEQGQ-----LIWQQ-------RISQPT-G-----ATE-IDRLVDV---DTTPVVVGG  257 (394)
T ss_pred             EEEEEcCCCE----E---EEEEccCCh-----hhhee-------ccccCC-C-----ccc-hhccccc---CCCcEEECC
Confidence            3444443332    3   011111111     34543       111100 0     000 0001111   1122  234


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      .++.++.++.+.  ..|..+++......... ..... ..+   ..++.++.+|.+..+|..+++...+. . .. .+ .
T Consensus       258 ~vy~~~~~g~l~--ald~~tG~~~W~~~~~~-~~~~~-~~~---~~vy~~~~~g~l~ald~~tG~~~W~~-~-~~-~~-~  326 (394)
T PRK11138        258 VVYALAYNGNLV--ALDLRSGQIVWKREYGS-VNDFA-VDG---GRIYLVDQNDRVYALDTRGGVELWSQ-S-DL-LH-R  326 (394)
T ss_pred             EEEEEEcCCeEE--EEECCCCCEEEeecCCC-ccCcE-EEC---CEEEEEcCCCeEEEEECCCCcEEEcc-c-cc-CC-C
Confidence            555566677777  77776654332221110 00000 000   46777888999999999988764432 1 01 11 1


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC---------CCCEEEEEcCCCcEEEEEC
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK---------KGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---------~~~~l~~~~~d~~i~i~d~  382 (537)
                      ...+..+  .+..++.++.||.++++|.. .++.+.......         .+..++.++.+|.+..++.
T Consensus       327 ~~~sp~v--~~g~l~v~~~~G~l~~ld~~-tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        327 LLTAPVL--YNGYLVVGDSEGYLHWINRE-DGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             cccCCEE--ECCEEEEEeCCCEEEEEECC-CCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence            1122222  24577888999999999998 555555444321         1457777788887776653

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.85  E-value=5.6e-07  Score=85.63  Aligned_cols=78  Identities=17%  Similarity=0.091  Sum_probs=47.7

Q ss_pred             EEcCCCCEEEEEeCC---------CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCC
Q psy10942        419 NFSPLDRILISSSGD---------ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTS  486 (537)
Q Consensus       419 ~~s~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~  486 (537)
                      .|||||++|+.....         ..|.+.|+.+++.. .+... .......|+|||+.|+..+.++   .+.+.++. |
T Consensus       325 ~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~-g  401 (419)
T PRK04043        325 SVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN-Y  401 (419)
T ss_pred             eECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecC-C
Confidence            577888777766543         36888898877643 33322 2334688999999887766432   36667774 4


Q ss_pred             eeEEEecCCccce
Q psy10942        487 TCVSTFDKHALKI  499 (537)
Q Consensus       487 ~~~~~~~~~~~~i  499 (537)
                      .....+....+.+
T Consensus       402 ~~~~~l~~~~g~~  414 (419)
T PRK04043        402 NKSFLFPLKVGKI  414 (419)
T ss_pred             CeeEEeecCCCcc
Confidence            4444454433444

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.83  E-value=2.8e-06  Score=81.26  Aligned_cols=220  Identities=7%  Similarity=-0.036  Sum_probs=123.5

Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc--eEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV--ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ..++.+..++.+.  .+|..+++.........+...........+  ..++.+..++.+..+|..+++...........+
T Consensus       161 ~~v~v~~~~g~l~--ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~  238 (394)
T PRK11138        161 GLVLVHTSNGMLQ--ALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTG  238 (394)
T ss_pred             CEEEEECCCCEEE--EEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCC
Confidence            3455556666666  666666543332211111100001011111  356777889999999998887543321100000


Q ss_pred             -cC-CCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCceeeEEEEec------CCCCEEEEEcCCCcEEEEECCCCeee
Q psy10942        319 -HE-KDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH------KKGTQIVSTGADGLLKLWSIKTSTCV  388 (537)
Q Consensus       319 -~~-~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~  388 (537)
                       +. .....+.-+|  .+..++.++.+|.+..+|..++ +.+-.....      ..+..++.++.+|.+..+|..+++.+
T Consensus       239 ~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG-~~~W~~~~~~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~  317 (394)
T PRK11138        239 ATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSG-QIVWKREYGSVNDFAVDGGRIYLVDQNDRVYALDTRGGVEL  317 (394)
T ss_pred             ccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCC-CEEEeecCCCccCcEEECCEEEEEcCCCeEEEEECCCCcEE
Confidence             00 0011111122  2456777778899999999844 332221111      12567788889999999999999876


Q ss_pred             eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE-EEEecCCC
Q psy10942        389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR-CHFINKGT  467 (537)
Q Consensus       389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~  467 (537)
                      .........                ...+...  .+.+++.++.+|.+..+|..+|+.+...+-....+.+ ..+  .+.
T Consensus       318 W~~~~~~~~----------------~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~  377 (394)
T PRK11138        318 WSQSDLLHR----------------LLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADD  377 (394)
T ss_pred             EcccccCCC----------------cccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECC
Confidence            544321110                0011111  1456788899999999999999998887654333332 222  244


Q ss_pred             EEEEEeCCCcEEEEEC
Q psy10942        468 QIVSTGADGLLKLWSI  483 (537)
Q Consensus       468 ~l~s~~~dg~v~vwd~  483 (537)
                      .|+.++.||.|+.++.
T Consensus       378 ~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        378 KLLIQARDGTVYAITR  393 (394)
T ss_pred             EEEEEeCCceEEEEeC
Confidence            7888899999888764

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.83  E-value=5.3e-06  Score=79.07  Aligned_cols=192  Identities=11%  Similarity=-0.082  Sum_probs=112.5

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE-EEEEeC---CCcEEEEEccCCceeeE---------EEEe
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL-LASGSL---DKTVKVWSTTGGLKLLN---------VLRG  361 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~---d~~i~i~d~~~~~~~~~---------~~~~  361 (537)
                      ..|.+-|.+.....      .+... +......|+|||+. ++..+.   +..|+++|+.+ ++...         ....
T Consensus       169 ~~l~~~d~dg~~~~------~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~t-g~~~~lt~~~g~~~~~~~  240 (419)
T PRK04043        169 SNIVLADYTLTYQK------VIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYT-GKKEKIASSQGMLVVSDV  240 (419)
T ss_pred             ceEEEECCCCCcee------EEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCC-CcEEEEecCCCcEEeeEE
Confidence            46666666555321      11122 36778999999984 554433   35688888873 32211         2234


Q ss_pred             cCCCCEEEE-EcCC--CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-C--c
Q psy10942        362 HKKGTQIVS-TGAD--GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-A--T  435 (537)
Q Consensus       362 ~~~~~~l~~-~~~d--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~  435 (537)
                      .++|..++. .+.+  ..|.++|+.+++... +..+..                 ......|+|||+.|+..+.. +  .
T Consensus       241 SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~-----------------~d~~p~~SPDG~~I~F~Sdr~g~~~  302 (419)
T PRK04043        241 SKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPG-----------------IDVNGNFVEDDKRIVFVSDRLGYPN  302 (419)
T ss_pred             CCCCCEEEEEEccCCCcEEEEEECCCCcEEE-cccCCC-----------------ccCccEECCCCCEEEEEECCCCCce
Confidence            566765543 3333  467777877765332 222211                 11234688888877766542 2  6


Q ss_pred             EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC---------CcEEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942        436 IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD---------GLLKLWSIKTSTCVSTFDKHALKIRNSDSEN  506 (537)
Q Consensus       436 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~  506 (537)
                      |.++|+.+++..+.... ..  ....|||||++|+..+..         ..|.+.|+.+++. ..+... ...       
T Consensus       303 Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~-------  370 (419)
T PRK04043        303 IFMKKLNSGSVEQVVFH-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVN-------  370 (419)
T ss_pred             EEEEECCCCCeEeCccC-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCc-------
Confidence            88888887766433321 11  124899999999877653         2578888877764 333322 122       


Q ss_pred             CCccccccceeeecCCCEEEEEeCC
Q psy10942        507 DHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       507 ~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                          ...   .|+|||+.|+....+
T Consensus       371 ----~~p---~~SPDG~~I~f~~~~  388 (419)
T PRK04043        371 ----QFP---RFSSDGGSIMFIKYL  388 (419)
T ss_pred             ----CCe---EECCCCCEEEEEEcc
Confidence                345   899999988765543

>KOG4649|consensus

Probab=98.82  E-value=7.8e-06  Score=68.25  Aligned_cols=134  Identities=10%  Similarity=0.016  Sum_probs=100.1

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL   95 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~   95 (537)
                      ..+++.|+..+.+.--|.++|+++-+......++.-+++ ..          .+++.|..+|.+++.+..+|++...+..
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vg----------dfVV~GCy~g~lYfl~~~tGs~~w~f~~   91 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VG----------DFVVLGCYSGGLYFLCVKTGSQIWNFVI   91 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-EC----------CEEEEEEccCcEEEEEecchhheeeeee
Confidence            357778889999999999999998877777777776544 22          3688899999999999999999888887


Q ss_pred             CcceEEEE-EeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942         96 SSPLVRIV-RSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        96 ~~~v~~~~-~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      .+.|.+-+ ..+++..+..++.|++....|..+           ...+...+-..+...+-+.. +.+..|.+++..+
T Consensus        92 ~~~vk~~a~~d~~~glIycgshd~~~yalD~~~-----------~~cVykskcgG~~f~sP~i~-~g~~sly~a~t~G  157 (354)
T KOG4649|consen   92 LETVKVRAQCDFDGGLIYCGSHDGNFYALDPKT-----------YGCVYKSKCGGGTFVSPVIA-PGDGSLYAAITAG  157 (354)
T ss_pred             hhhhccceEEcCCCceEEEecCCCcEEEecccc-----------cceEEecccCCceeccceec-CCCceEEEEeccc
Confidence            77665443 478999999999999999999998           66666655444433444455 4344454544433

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.82  E-value=7.6e-06  Score=72.57  Aligned_cols=206  Identities=14%  Similarity=0.040  Sum_probs=130.8

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------CC
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KG  365 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~  365 (537)
                      +|.|..+|..+++.+.+.-..  ..... ..+. ..+++..+++++.++.++.||.. .++.+-......        .+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~--~~~~~-~~~~-~~~~~~~v~~~~~~~~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~   76 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLG--PGIGG-PVAT-AVPDGGRVYVASGDGNLYALDAK-TGKVLWRFDLPGPISGAPVVDG   76 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECS--SSCSS-EEET-EEEETTEEEEEETTSEEEEEETT-TSEEEEEEECSSCGGSGEEEET
T ss_pred             CCEEEEEECCCCCEEEEEECC--CCCCC-ccce-EEEeCCEEEEEcCCCEEEEEECC-CCCEEEEeeccccccceeeecc
Confidence            688999999999876654111  11222 2211 23356678888899999999998 556655555422        25


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeee-ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTF-DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                      ..++.+..++.+..+|..+++.+... ........              .........++..++.+..++.|..+|.++|
T Consensus        77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG  142 (238)
T PF13360_consen   77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG--------------VRSSSSPAVDGDRLYVGTSSGKLVALDPKTG  142 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS--------------TB--SEEEEETTEEEEEETCSEEEEEETTTT
T ss_pred             cccccccceeeeEecccCCcceeeeeccccccccc--------------cccccCceEecCEEEEEeccCcEEEEecCCC
Confidence            67777778889999999999988774 32211000              0011112222677888888999999999999


Q ss_pred             eeeeEeecCCcce----------EEEEEecCCCEEEEEeCCCc-EEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        445 VCLKSLEGHDASV----------LRCHFINKGTQIVSTGADGL-LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       445 ~~~~~~~~~~~~v----------~~~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      +.+..........          ..-....++ .++.++.++. +.+ |+.+++.+....  ....           .. 
T Consensus       143 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~-----------~~-  206 (238)
T PF13360_consen  143 KLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGI-----------YS-  206 (238)
T ss_dssp             EEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-E-----------CE-
T ss_pred             cEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCc-----------cC-
Confidence            9988887644221          122222244 7777777886 555 999999664333  2222           22 


Q ss_pred             cceeeecCCCEEEEEeCCCCEEeC
Q psy10942        514 PRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                         ....++..|+.++.++.|..|
T Consensus       207 ---~~~~~~~~l~~~~~~~~l~~~  227 (238)
T PF13360_consen  207 ---LPSVDGGTLYVTSSDGRLYAL  227 (238)
T ss_dssp             ---CEECCCTEEEEEETTTEEEEE
T ss_pred             ---CceeeCCEEEEEeCCCEEEEE
Confidence               256788888888888887654

...

>KOG2695|consensus

Probab=98.81  E-value=3.1e-08  Score=85.36  Aligned_cols=156  Identities=20%  Similarity=0.249  Sum_probs=110.7

Q ss_pred             EEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942        289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI  368 (537)
Q Consensus       289 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l  368 (537)
                      ++.+.+..+-+-|++++..      ..+ ...+.|.++.|.-.++++..|+.+|.|..+|++...      .+       
T Consensus       228 fs~G~sqqv~L~nvetg~~------qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rn------qG-------  287 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ------QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRN------QG-------  287 (425)
T ss_pred             ecccccceeEEEEeecccc------ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecc------cC-------
Confidence            5556677788889888853      222 256778889998888999999999999999998320      00       


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCcee-
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVC-  446 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~-  446 (537)
                                     ++.+...+ .|..                 .++++..-. ++++|.+.+.+|+|++||++--++ 
T Consensus       288 ---------------~~~~a~rl-yh~S-----------------svtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~  334 (425)
T KOG2695|consen  288 ---------------NGWCAQRL-YHDS-----------------SVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCK  334 (425)
T ss_pred             ---------------CCcceEEE-EcCc-----------------chhhhhhhccccceEeeccCcCceeEeeehhhhcc
Confidence                           00111111 1111                 455554444 567888889999999999987666 


Q ss_pred             --eeEeecCCcceEEE--EEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc
Q psy10942        447 --LKSLEGHDASVLRC--HFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  497 (537)
Q Consensus       447 --~~~~~~~~~~v~~~--~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~  497 (537)
                        +..+++|-+.-.-+  ...+....++++++|...|||.++.|.++.+++....
T Consensus       335 ~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s  389 (425)
T KOG2695|consen  335 KSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYS  389 (425)
T ss_pred             cceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCc
Confidence              88899986654333  3456677899999999999999999999988865443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.81  E-value=6.2e-06  Score=70.11  Aligned_cols=167  Identities=15%  Similarity=0.258  Sum_probs=97.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-----------------------CCEEEEEcCCCc
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----------------------GTQIVSTGADGL  376 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------------------~~~l~~~~~d~~  376 (537)
                      ...-+.++||||+.+||.+...|+|+++|+. +... ..+.....                       ...+++-..+|.
T Consensus        43 ~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~-g~~l-f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~  120 (282)
T PF15492_consen   43 NPQWRKLAWSPDCTLLAYAESTGTIRVFDLM-GSEL-FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQ  120 (282)
T ss_pred             CchheEEEECCCCcEEEEEcCCCeEEEEecc-ccee-EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccce
Confidence            3445789999999999999999999999998 3222 22221110                       123334444444


Q ss_pred             EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----------CcEEEEECCCce
Q psy10942        377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----------ATIKLWCLTDYV  445 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~i~d~~~~~  445 (537)
                      ++-|-+..+..     .......+..+.+....    +|.++.++|..++|++|+..           .-+.-|.+-++.
T Consensus       121 L~Sy~vs~gt~-----q~y~e~hsfsf~~~yp~----Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~  191 (282)
T PF15492_consen  121 LRSYLVSVGTN-----QGYQENHSFSFSSHYPH----GINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDS  191 (282)
T ss_pred             eeeEEEEcccC-----CcceeeEEEEecccCCC----ceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCC
Confidence            44443321100     00011112222222111    67777777777777766531           124455432211


Q ss_pred             ee-----------------------eE-----e-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        446 CL-----------------------KS-----L-EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       446 ~~-----------------------~~-----~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      +.                       ..     . ......|..|..||||+.||+...+|.|.+|++.+-++.+.+..++
T Consensus       192 Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e  271 (282)
T PF15492_consen  192 PYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE  271 (282)
T ss_pred             CcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence            00                       00     0 1134568999999999999999999999999999888777766544


Q ss_pred             c
Q psy10942        497 L  497 (537)
Q Consensus       497 ~  497 (537)
                      .
T Consensus       272 q  272 (282)
T PF15492_consen  272 Q  272 (282)
T ss_pred             C
Confidence            3

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.80  E-value=4e-08  Score=83.45  Aligned_cols=274  Identities=13%  Similarity=0.099  Sum_probs=144.6

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccce--e----------------eeeccccccceeeeEeecCcccccc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ--L----------------RSYPAYESLETCAVFHLSDETESKS   64 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~   64 (537)
                      ..|+++.|-  ..|.||++|...|.|.++.-+....  .                +.+...+.+..+  -+...+     
T Consensus        27 d~ItaVefd--~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I--~w~~~t-----   97 (460)
T COG5170          27 DKITAVEFD--ETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAI--EWFDDT-----   97 (460)
T ss_pred             ceeeEEEec--cccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhhe--eeecCC-----
Confidence            468999999  8999999999999999997654321  1                112233344444  444432     


Q ss_pred             CCcEEEEEeCccceEEeeecccee--hhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         65 GGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        65 ~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                       +...++..+.|.+|++|.+-...  .+..-...+.++    +|-+.-|.+-   ..+++=.+...     .......+.
T Consensus        98 -~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~----~~~~g~~~s~---~~l~lprls~h-----d~iiaa~p~  164 (460)
T COG5170          98 -GRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFH----SPMGGPLTST---KELLLPRLSEH-----DEIIAAKPC  164 (460)
T ss_pred             -CcceEEEecCCceeeeeeeecccchhhhccccccccc----cccCCCcCCH---HHhhccccccc-----ceEEEeccc
Confidence             55666667779999999986532  222222111111    2222111000   01111000000     000000111


Q ss_pred             EEe-ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccc
Q psy10942        143 KQF-VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERL  220 (537)
Q Consensus       143 ~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~  220 (537)
                      +.. ..|.-.+.++.|+ .+...++++.. -.    |                 .+|++.   ........+ +++....
T Consensus       165 rvyaNaH~yhiNSiS~N-sD~et~lSaDd-Lr----I-----------------NLWnl~---i~D~sFnIVDiKP~nme  218 (460)
T COG5170         165 RVYANAHPYHINSISFN-SDKETLLSADD-LR----I-----------------NLWNLE---IIDGSFNIVDIKPHNME  218 (460)
T ss_pred             eeccccceeEeeeeeec-Cchheeeeccc-ee----e-----------------eecccc---ccCCceEEEeccCccHH
Confidence            111 3466668899998 66666655433 33    7                 889871   011111112 3311111


Q ss_pred             cCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      .-  ..-|++.   .|+|.. ..+...+..|.|+  +-|++..   ..|                         |..-++
T Consensus       219 eL--teVItSa---eFhp~~cn~fmYSsSkG~Ik--l~DlRq~---alc-------------------------dn~~kl  263 (460)
T COG5170         219 EL--TEVITSA---EFHPEMCNVFMYSSSKGEIK--LNDLRQS---ALC-------------------------DNSKKL  263 (460)
T ss_pred             HH--HHHHhhc---ccCHhHcceEEEecCCCcEE--ehhhhhh---hhc-------------------------cCchhh
Confidence            22  3456677   788754 4555566678888  7777652   111                         111112


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  364 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  364 (537)
                      +...-...-    ...+.+-...|..+.|+++|+++++-.. -++++||.+....++.++..|.+
T Consensus       264 fe~~~D~v~----~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~  323 (460)
T COG5170         264 FELTIDGVD----VDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCD  323 (460)
T ss_pred             hhhccCccc----chhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHH
Confidence            111110000    1223344567899999999999887544 67999999988888888877753

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.80  E-value=1e-06  Score=74.74  Aligned_cols=198  Identities=12%  Similarity=0.080  Sum_probs=107.7

Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc---------------eEEEE
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV---------------ELLAS  290 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------~~l~~  290 (537)
                      ..=..+   +||||+..||.+...|+|+  ++|+....    +...++.....+....++               ..|++
T Consensus        44 PQWRkl---~WSpD~tlLa~a~S~G~i~--vfdl~g~~----lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlv  114 (282)
T PF15492_consen   44 PQWRKL---AWSPDCTLLAYAESTGTIR--VFDLMGSE----LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLV  114 (282)
T ss_pred             chheEE---EECCCCcEEEEEcCCCeEE--EEecccce----eEEcCcccccCCccccceeeeEeeccccccccceeEEE
Confidence            334566   8999999999999999999  99988632    111111111111111111               35555


Q ss_pred             EeCCCeEEEEECCC--Cceeeeeecccc-cccCCCeEEEEEcCCCCEEEEEeCCC-----------cEEEEEccCCceee
Q psy10942        291 GSLDKTVKVWSTTG--GLKLLNVLRGHK-KGHEKDINCVTVSPNDKLLASGSLDK-----------TVKVWSTTGGLKLL  356 (537)
Q Consensus       291 ~~~d~~i~i~~~~~--~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~  356 (537)
                      -..+|.++-|-+..  .+.........+ ..+...|.++.++|..++|++|+...           -+..|.+-......
T Consensus       115 i~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyy  194 (282)
T PF15492_consen  115 INYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYY  194 (282)
T ss_pred             EeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcE
Confidence            66677777776532  111111111122 23467899999999999988876432           13344433221111


Q ss_pred             EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                      .......+ ..-.....   ..+|.+.+.+..........                 .|..|..||||+.||+...+|.|
T Consensus       195 k~v~~~~~-~~~~~~~~---~~~~~~~~~~~fs~~~~~~d-----------------~i~kmSlSPdg~~La~ih~sG~l  253 (282)
T PF15492_consen  195 KQVTSSED-DITASSKR---RGLLRIPSFKFFSRQGQEQD-----------------GIFKMSLSPDGSLLACIHFSGSL  253 (282)
T ss_pred             EEccccCc-cccccccc---cceeeccceeeeeccccCCC-----------------ceEEEEECCCCCEEEEEEcCCeE
Confidence            11111100 00000001   11222221111110000111                 78999999999999999999999


Q ss_pred             EEEECCCceeeeEeecC
Q psy10942        437 KLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~  453 (537)
                      .+|++.+.++.....-+
T Consensus       254 sLW~iPsL~~~~~W~~~  270 (282)
T PF15492_consen  254 SLWEIPSLRLQRSWKQD  270 (282)
T ss_pred             EEEecCcchhhcccchh
Confidence            99999987777666544

>KOG4190|consensus

Probab=98.78  E-value=1.7e-08  Score=92.34  Aligned_cols=277  Identities=12%  Similarity=0.126  Sum_probs=176.0

Q ss_pred             eEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccc
Q psy10942        142 RKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTER  219 (537)
Q Consensus       142 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~  219 (537)
                      +..+.||...|..++-. ++.+.+++++.++.    +                 ++|.+..+.....+..|+  +.    
T Consensus       728 L~nf~GH~~~iRai~Ai-dNENSFiSASkDKT----V-----------------KLWSik~EgD~~~tsaCQfTY~----  781 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAI-DNENSFISASKDKT----V-----------------KLWSIKPEGDEIGTSACQFTYQ----  781 (1034)
T ss_pred             eecccCcHHHhHHHHhc-ccccceeeccCCce----E-----------------EEEEeccccCccccceeeeEhh----
Confidence            45678999999999877 67777889998888    9                 999883333333444455  45    


Q ss_pred             ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC-C---cc-----eEE-E
Q psy10942        220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG-G---TV-----ELL-A  289 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~---~v-----~~l-~  289 (537)
                       .|  ..+|..+   .|-.+.++++++  ||.+.  +||.--+......      .....+.. +   ++     ..+ +
T Consensus       782 -aH--kk~i~~i---gfL~~lr~i~Sc--D~giH--lWDPFigr~Laq~------~dapk~~a~~~ikcl~nv~~~iliA  845 (1034)
T KOG4190|consen  782 -AH--KKPIHDI---GFLADLRSIASC--DGGIH--LWDPFIGRLLAQM------EDAPKEGAGGNIKCLENVDRHILIA  845 (1034)
T ss_pred             -hc--cCcccce---eeeeccceeeec--cCcce--eecccccchhHhh------hcCcccCCCceeEecccCcchheee
Confidence             89  9999999   999998888866  67899  9997653211111      00011111 1   11     233 3


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec-------
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH-------  362 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------  362 (537)
                      .++...+|+++|.+..+.........-.+..+.+++++..|.|+.++.+-.+|+|.+.|.+ .++.+...+.-       
T Consensus       846 gcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR-~G~vINswrpmecdllql  924 (1034)
T KOG4190|consen  846 GCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDAR-NGKVINSWRPMECDLLQL  924 (1034)
T ss_pred             eccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecC-CCceeccCCcccchhhhh
Confidence            4478899999999987765444333334556778999999999999999999999999999 66666544322       


Q ss_pred             --CCCCEEEEEcCCCcEEE-EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        363 --KKGTQIVSTGADGLLKL-WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW  439 (537)
Q Consensus       363 --~~~~~l~~~~~d~~i~i-~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~  439 (537)
                        +..+.++....|.++.+ |....+......+....+..          +         .-.-|.-|+++.....+.+|
T Consensus       925 aapsdq~L~~saldHslaVnWhaldgimh~q~kpppepah----------f---------lqsvgpSLV~a~~Gn~lgVY  985 (1034)
T KOG4190|consen  925 AAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAH----------F---------LQSVGPSLVTAQNGNILGVY  985 (1034)
T ss_pred             cCchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcchh----------h---------hhccCceeEEeccCcEEEEE
Confidence              23456666667777777 77666544433332221100          0         00113346666555556666


Q ss_pred             ECCC----ceeeeEee--cCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        440 CLTD----YVCLKSLE--GHDASVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       440 d~~~----~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                      .-..    ...+..++  ...+..++++--|-..-+..|...|.|.+
T Consensus       986 ad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen  986 ADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred             ecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence            3211    11111222  13456788888887677777888888765

>KOG4532|consensus

Probab=98.78  E-value=2.3e-07  Score=77.32  Aligned_cols=206  Identities=13%  Similarity=-0.000  Sum_probs=126.3

Q ss_pred             ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccC
Q psy10942        108 KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGAN  187 (537)
Q Consensus       108 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~  187 (537)
                      -.+||.|+.-|...+|...+.          ....+....|...|.-+.=.......+..++.+.+    +         
T Consensus        84 c~~la~gG~~g~fd~~~~~tn----------~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht----~---------  140 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTN----------DGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHT----G---------  140 (344)
T ss_pred             ccEEEeccccceeeeecccCc----------ccceeeecccccchhhhhhhcccccceeeccCCcc----e---------
Confidence            357999999999999999874          23333444444433222111122344567777776    5         


Q ss_pred             CCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccc
Q psy10942        188 RSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLF  267 (537)
Q Consensus       188 ~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~  267 (537)
                              ++.++       ..+.....     .|...-.+.++   ++++|++++++.+....+.  .+.++.......
T Consensus       141 --------k~~~~-------~~~s~~~~-----~h~~~~~~ns~---~~snd~~~~~~Vgds~~Vf--~y~id~~sey~~  195 (344)
T KOG4532|consen  141 --------KTMVV-------SGDSNKFA-----VHNQNLTQNSL---HYSNDPSWGSSVGDSRRVF--RYAIDDESEYIE  195 (344)
T ss_pred             --------eEEEE-------ecCcccce-----eeccccceeee---EEcCCCceEEEecCCCcce--EEEeCCccceee
Confidence                    55544       32222222     34102237788   9999999999999989998  888887543222


Q ss_pred             cccccccceeeeeeC--CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC--EEEEEeCCCc
Q psy10942        268 GIFVPEAEHGAFYTG--GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK--LLASGSLDKT  343 (537)
Q Consensus       268 ~~~~~~~~~~~~~~~--~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~d~~  343 (537)
                      .....+...-.+...  ..-..++++..||++.|||++....+..........|.+.++.+.|++.|.  +|+..-.-+.
T Consensus       196 ~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~  275 (344)
T KOG4532|consen  196 NIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSR  275 (344)
T ss_pred             eeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcce
Confidence            111100000000011  111689999999999999999877666554556677999999999998653  4454445577


Q ss_pred             EEEEEccCCceeeEEEEec
Q psy10942        344 VKVWSTTGGLKLLNVLRGH  362 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~  362 (537)
                      +.+.|++ .....+.+...
T Consensus       276 ~hv~D~R-~~~~~q~I~i~  293 (344)
T KOG4532|consen  276 VHVVDTR-NYVNHQVIVIP  293 (344)
T ss_pred             EEEEEcc-cCceeeEEecC
Confidence            8888888 44444444433

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.74  E-value=2.1e-05  Score=75.86  Aligned_cols=176  Identities=15%  Similarity=0.085  Sum_probs=107.7

Q ss_pred             eEEEEEcCCCCEEEEEeCC----CcEEEEEccCCceeeEEEEe------cCCCCEEEEEcCCCcEEEEECCC-----Cee
Q psy10942        323 INCVTVSPNDKLLASGSLD----KTVKVWSTTGGLKLLNVLRG------HKKGTQIVSTGADGLLKLWSIKT-----STC  387 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~------~~~~~~l~~~~~d~~i~i~d~~~-----~~~  387 (537)
                      ...++++|+|+++++.+.+    .++...+.. ....+..+..      .++|++...  .++.|.+.|..+     .+.
T Consensus       237 pd~v~~spdGk~afvTsyNsE~G~tl~em~a~-e~d~~vvfni~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v  313 (635)
T PRK02888        237 LDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAA-ERDWVVVFNIARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSAL  313 (635)
T ss_pred             cccceECCCCCEEEEeccCcccCcceeeeccc-cCceEEEEchHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcce
Confidence            3456788888888877532    223333332 1222222211      234555554  357788999887     344


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCcee------------eeEeecCC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVC------------LKSLEGHD  454 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~------------~~~~~~~~  454 (537)
                      +..+....                  ....+.++|||+++++++. +.++.++|+.+.+.            ..+.+--.
T Consensus       314 ~~yIPVGK------------------sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGl  375 (635)
T PRK02888        314 TRYVPVPK------------------NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGL  375 (635)
T ss_pred             EEEEECCC------------------CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCC
Confidence            44443333                  6678999999998887764 78999999987542            33333322


Q ss_pred             cceEEEEEecCCCEEEEEeCCCcEEEEECCC----------CeeEEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942        455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKT----------STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      + -...+|.++|+...|..-|..|..|++.+          ...+..+..|-.+-.....      .+=   .-.|||++
T Consensus       376 G-PLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~------~g~---t~~~dgk~  445 (635)
T PRK02888        376 G-PLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHAS------MGE---TKEADGKW  445 (635)
T ss_pred             C-cceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeec------CCC---cCCCCCCE
Confidence            3 35678999998888888999999999876          3455555555443311111      111   33678888


Q ss_pred             EEEEe
Q psy10942        525 EYRGG  529 (537)
Q Consensus       525 l~s~~  529 (537)
                      |++..
T Consensus       446 l~~~n  450 (635)
T PRK02888        446 LVSLN  450 (635)
T ss_pred             EEEcc
Confidence            88763

>KOG0280|consensus

Probab=98.74  E-value=1e-06  Score=74.51  Aligned_cols=109  Identities=17%  Similarity=0.252  Sum_probs=85.2

Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECC-CCeeEE
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIK-TSTCVS  490 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~-~~~~~~  490 (537)
                      ..++.|++.+..++++..+|.+.+-+......  ++.++.|..+..-..|+. +.+++.+|++|+.+..||++ .++.+.
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            45677888888899999999999776655443  448899999999999976 45688999999999999998 334443


Q ss_pred             E-ecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942        491 T-FDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       491 ~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~i~vW  537 (537)
                      . -+.|...|           .++   .-+| .+.+|+||+.|..|++|
T Consensus       204 ~n~kvH~~GV-----------~SI---~ss~~~~~~I~TGsYDe~i~~~  238 (339)
T KOG0280|consen  204 HNSKVHTSGV-----------VSI---YSSPPKPTYIATGSYDECIRVL  238 (339)
T ss_pred             ecceeeecce-----------EEE---ecCCCCCceEEEeccccceeee
Confidence            3 45677777           666   5554 57799999999999988

>KOG4714|consensus

Probab=98.72  E-value=1.5e-07  Score=78.07  Aligned_cols=190  Identities=18%  Similarity=0.241  Sum_probs=110.7

Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC----------CCCEEEEEc-----CCCcEEEEECCCCeeeeee
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------KGTQIVSTG-----ADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~l~~~~-----~d~~i~i~d~~~~~~~~~~  391 (537)
                      +.+-.++.+++++.||.+.+++.+........+....          .++.+.++.     .-+..+.|+++..+.+..-
T Consensus        96 ~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~  175 (319)
T KOG4714|consen   96 ACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS  175 (319)
T ss_pred             cccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccc
Confidence            3344567799999999999998773222222221111          122232221     1223344444433221111


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCce-eeeEeecCCcceEEEEEec-CCCE
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYV-CLKSLEGHDASVLRCHFIN-KGTQ  468 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~-~~~~  468 (537)
                      .....                 .+.+++-+|.. +.+++|+.||.+.+||.+... +...+..|+.++..+.|+| ++..
T Consensus       176 ~~~~~-----------------~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~  238 (319)
T KOG4714|consen  176 KKALD-----------------AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH  238 (319)
T ss_pred             ccccc-----------------cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh
Confidence            11111                 46677777754 567788899999999998753 3445678999999999999 6779


Q ss_pred             EEEEeCCCcEEEEECCCCeeEEE-e--cCCccc-----eec---cCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        469 IVSTGADGLLKLWSIKTSTCVST-F--DKHALK-----IRN---SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       469 l~s~~~dg~v~vwd~~~~~~~~~-~--~~~~~~-----i~~---~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      |+++++||.+..||..+ ..+.. .  ..+...     +..   ++.-......+++  .|.--|..|++|++-+.|.+
T Consensus       239 Lft~sedGslw~wdas~-~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~Sin--sfDV~g~~lVcgtd~eaIyl  314 (319)
T KOG4714|consen  239 LFTCSEDGSLWHWDAST-TFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSIN--SFDVLGPCLVCGTDAEAIYL  314 (319)
T ss_pred             eeEecCCCcEEEEcCCC-ceEEecCccccccccccCCcccceEeeeccccccceeee--eeeccCceEEeccccceEEE
Confidence            99999999999999754 33321 0  111111     100   0000111112222  55567889999998888776

>KOG0309|consensus

Probab=98.72  E-value=9.9e-08  Score=90.50  Aligned_cols=278  Identities=13%  Similarity=0.073  Sum_probs=175.5

Q ss_pred             eeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-ehhhhcCCC--cceEEEEEeccc--cEEEE
Q psy10942         39 LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV-KELYQHGLS--SPLVRIVRSSVK--RMYAV  113 (537)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~~--~~v~~~~~s~~~--~~la~  113 (537)
                      ...+....+..++  ...|        .++-++.++.-| +.+-|+... ...+-+.+.  =.|-.+.|||..  .+-++
T Consensus        18 slsl~v~~~~~a~--si~p--------~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiV   86 (1081)
T KOG0309|consen   18 SLSLKVDGGFNAV--SINP--------SGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIV   86 (1081)
T ss_pred             eeEEEecCcccce--eecc--------ccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEE
Confidence            3344455566666  4566        456677777666 556666543 222222222  257777887643  34445


Q ss_pred             EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942        114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW  193 (537)
Q Consensus       114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~  193 (537)
                      ......-.+|++.....        ......+.+|...|+.+.|.|.....+++++.+..    +               
T Consensus        87 sts~qkaiiwnlA~ss~--------~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~----v---------------  139 (1081)
T KOG0309|consen   87 STSNQKAIIWNLAKSSS--------NAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTY----V---------------  139 (1081)
T ss_pred             ecCcchhhhhhhhcCCc--------cceEEEEecCccceeccccCCCCCcceeecccccc----c---------------
Confidence            55556677999875321        45566788999999999999888888888888887    8               


Q ss_pred             hHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc
Q psy10942        194 FDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE  273 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~  273 (537)
                        ..||+       ++....+.  ....-  ......+   +|+.....+.+.+....+.  +|+.+.+..+        
T Consensus       140 --h~wd~-------rSp~~p~y--s~~~w--~s~asqV---kwnyk~p~vlasshg~~i~--vwd~r~gs~p--------  193 (1081)
T KOG0309|consen  140 --HAWDM-------RSPHRPFY--STSSW--RSAASQV---KWNYKDPNVLASSHGNDIF--VWDLRKGSTP--------  193 (1081)
T ss_pred             --eeeec-------cCCCccee--eeecc--cccCcee---eecccCcchhhhccCCceE--EEeccCCCcc--------
Confidence              99999       65554411  00022  3445566   7776555555566677899  9999987544        


Q ss_pred             cceeeeeeC--Ccc-------eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE--Ee---
Q psy10942        274 AEHGAFYTG--GTV-------ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS--GS---  339 (537)
Q Consensus       274 ~~~~~~~~~--~~v-------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~---  339 (537)
                      +..+.+|..  +.+       ..+.+.+.|++|+.||........+    .......+|..-.+.|-|.-.++  --   
T Consensus       194 l~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~----~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n  269 (1081)
T KOG0309|consen  194 LCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESK----RTVTTNFPIWRGRYLPFGEGYCIMPMVGGN  269 (1081)
T ss_pred             eEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccc----eeccccCcceeccccccCceeEeccccCCe
Confidence            344444433  222       6788999999999999876543221    11223445555566663332211  11   


Q ss_pred             ------CCCcEEEEEccCCceeeEEEEecCC--------------------CCEEEEEcCCCcEEEEECCC
Q psy10942        340 ------LDKTVKVWSTTGGLKLLNVLRGHKK--------------------GTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       340 ------~d~~i~i~d~~~~~~~~~~~~~~~~--------------------~~~l~~~~~d~~i~i~d~~~  384 (537)
                            -+.....|+......++..+.+|.+                    .-.|++-+.|.++++|-+.+
T Consensus       270 ~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  270 MVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             eeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence                  1222334555556778899999875                    34799999999999997753

>KOG3914|consensus

Probab=98.71  E-value=7.3e-08  Score=84.95  Aligned_cols=157  Identities=11%  Similarity=0.073  Sum_probs=112.3

Q ss_pred             eeeeccCCcceEEEecCcceEEEEEcCc----cceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFTWDLSS----RKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      +.++  +++++++.+..+....+.++..    -+++..........++.|+.-..       .....-.+|....+.+|.
T Consensus        68 ~~~s--~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~-------sv~v~dkagD~~~~di~s  138 (390)
T KOG3914|consen   68 VLTS--DSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDT-------SVLVADKAGDVYSFDILS  138 (390)
T ss_pred             cccC--CCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccc-------eEEEEeecCCceeeeeec
Confidence            4455  7888888887776665665543    23444455555556663322221       323344456677788888


Q ss_pred             ccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942         84 TSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS  163 (537)
Q Consensus        84 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  163 (537)
                      ..++...-.+.+-..++.+++|||++.|+++..|..|++-.+...          ...-.-.-||..-|..++.-+  +.
T Consensus       139 ~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~----------f~IesfclGH~eFVS~isl~~--~~  206 (390)
T KOG3914|consen  139 ADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT----------FVIESFCLGHKEFVSTISLTD--NY  206 (390)
T ss_pred             ccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc----------cchhhhccccHhheeeeeecc--Cc
Confidence            777777777777789999999999999999999999999887762          333344567999999999873  45


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ  213 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~  213 (537)
                      .|+++++|+.    +                 ++||+       .+++++
T Consensus       207 ~LlS~sGD~t----l-----------------r~Wd~-------~sgk~L  228 (390)
T KOG3914|consen  207 LLLSGSGDKT----L-----------------RLWDI-------TSGKLL  228 (390)
T ss_pred             eeeecCCCCc----E-----------------EEEec-------ccCCcc
Confidence            5788888877    9                 99999       888776

>KOG2066|consensus

Probab=98.67  E-value=1.6e-06  Score=83.56  Aligned_cols=171  Identities=16%  Similarity=0.174  Sum_probs=122.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe----cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG----HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  396 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  396 (537)
                      ..+.|++++  +++|+.|+.+|.+++++.... .  ...-.    ...|.++++++.||++.+..+-+.+...++..+. 
T Consensus        40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~--~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~r-  113 (846)
T KOG2066|consen   40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P--KTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKR-  113 (846)
T ss_pred             hHHHHHHhh--cceeeeccccceEEEEecCCc-c--cccccccccccCCceEEEecCCCcEEEeeccCCccceeEecCC-
Confidence            456777775  678999999999999998832 2  22222    3459999999999999999998888777766555 


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcCC-----CCEEEEEeCCCcEEEEECCC-c-eeeeEeecCCcceEEEEEecCCCEE
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSPL-----DRILISSSGDATIKLWCLTD-Y-VCLKSLEGHDASVLRCHFINKGTQI  469 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~~~dg~i~i~d~~~-~-~~~~~~~~~~~~v~~~~~s~~~~~l  469 (537)
                                       ++.+++++|+     .+.+++|+.-| +.++.-+- + +.-..+....++|.++.|.  |.++
T Consensus       114 -----------------piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lI  173 (846)
T KOG2066|consen  114 -----------------PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLI  173 (846)
T ss_pred             -----------------cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEE
Confidence                             7788888887     46888998888 77765321 1 1111355567899999995  5688


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        470 VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      |=++.+| |+|||..+++.+..++.....++     ++-.+-.+   .|.++.++++
T Consensus       174 AWand~G-v~vyd~~~~~~l~~i~~p~~~~R-----~e~fpphl---~W~~~~~LVI  221 (846)
T KOG2066|consen  174 AWANDDG-VKVYDTPTRQRLTNIPPPSQSVR-----PELFPPHL---HWQDEDRLVI  221 (846)
T ss_pred             EEecCCC-cEEEeccccceeeccCCCCCCCC-----cccCCCce---EecCCCeEEE
Confidence            8887776 99999999998887765554431     12122334   8887776554

>KOG0882|consensus

Probab=98.66  E-value=2.1e-07  Score=83.26  Aligned_cols=310  Identities=11%  Similarity=0.072  Sum_probs=183.6

Q ss_pred             CcEEEEEeCccceEEeeeccc--e-ehhhhcC-CCcceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSA--V-KELYQHG-LSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILK  140 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~--~-~~~~~~~-~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~  140 (537)
                      ...++++++.||.++.|--..  | +.+..+. +.+.|.+++.|.|+.++++.+. |..++++|+..           ..
T Consensus        19 ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn-----------~D   87 (558)
T KOG0882|consen   19 KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN-----------FD   87 (558)
T ss_pred             hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec-----------cc
Confidence            336999999999999997543  2 2233333 3368999999999999999777 99999999987           33


Q ss_pred             eeEEee--cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----c
Q psy10942        141 FRKQFV--GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----K  214 (537)
Q Consensus       141 ~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l  214 (537)
                      .+..++  ...+.+. ...++.+...+++.+...+  +.+                 .++|-       ....++    -
T Consensus        88 minmiKL~~lPg~a~-wv~skGd~~s~IAVs~~~s--g~i-----------------~VvD~-------~~d~~q~~~fk  140 (558)
T KOG0882|consen   88 MINMIKLVDLPGFAE-WVTSKGDKISLIAVSLFKS--GKI-----------------FVVDG-------FGDFCQDGYFK  140 (558)
T ss_pred             hhhhcccccCCCceE-EecCCCCeeeeEEeecccC--CCc-----------------EEECC-------cCCcCccceec
Confidence            332222  1111111 1122212222233333333  446                 66666       444433    2


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD  294 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d  294 (537)
                      .     -|  ..+|.++   .+++.+..+++....|.|.  -|.....-+..                            
T Consensus       141 k-----lH--~sPV~~i---~y~qa~Ds~vSiD~~gmVE--yWs~e~~~qfP----------------------------  180 (558)
T KOG0882|consen  141 K-----LH--FSPVKKI---RYNQAGDSAVSIDISGMVE--YWSAEGPFQFP----------------------------  180 (558)
T ss_pred             c-----cc--cCceEEE---EeeccccceeeccccceeE--eecCCCcccCc----------------------------
Confidence            3     57  8999999   9999999999999999999  99987511000                            


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                      ..=.-|.+.....+.     .+........++.|+|++..+.+-+.|..|++++.. +++.++.+...........-+  
T Consensus       181 r~~l~~~~K~eTdLy-----~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K-tGklvqeiDE~~t~~~~q~ks--  252 (558)
T KOG0882|consen  181 RTNLNFELKHETDLY-----GFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK-TGKLVQEIDEVLTDAQYQPKS--  252 (558)
T ss_pred             cccccccccccchhh-----cccccccCccceEEccccCcccccCcccEEEEEEec-cchhhhhhhccchhhhhcccc--
Confidence            001123333333221     112234557899999999999999999999999999 777776665433210000000  


Q ss_pred             CcEEEEECCCCe---eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        375 GLLKLWSIKTST---CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       375 ~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                       .+.+-++.-++   ..+.++.+..                .....+.|...+++|+.|+-=| |++.++.++.+.+.+.
T Consensus       253 -~y~l~~VelgRRmaverelek~~~----------------~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g  314 (558)
T KOG0882|consen  253 -PYGLMHVELGRRMAVERELEKHGS----------------TVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG  314 (558)
T ss_pred             -ccccceeehhhhhhHHhhHhhhcC----------------cccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence             11111111000   0111111111                1455678888889998887644 7888888877666553


Q ss_pred             cC---------------------------CcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        452 GH---------------------------DASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       452 ~~---------------------------~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                      ..                           .++.  +.+-+|..+++++-..+.++++
T Consensus       315 k~e~ir~~~~sl~q~~~k~~~~~~~~~a~~np~--~~~~~dpt~~c~a~kk~rfylf  369 (558)
T KOG0882|consen  315 KDEAIRFTRLSLYQGAQKSNLAALEVAASNNPL--LEFQKDPTIVCTAFKKNRFYLF  369 (558)
T ss_pred             cchhhhhhhHHHHhhhhhccchhhhhhhccCcc--cccCCCCeEEEeeeecceEEEE
Confidence            11                           1111  2255566667777777777777

>KOG4649|consensus

Probab=98.63  E-value=7.2e-05  Score=62.68  Aligned_cols=95  Identities=12%  Similarity=0.042  Sum_probs=70.3

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      .+.+++.++..+.+.--|..+|+...+......|.+-+.- -|++++.|...|.+++.+.++           +.....+
T Consensus        22 skT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~t-----------Gs~~w~f   89 (354)
T KOG4649|consen   22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKT-----------GSQIWNF   89 (354)
T ss_pred             CceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecc-----------hhheeee
Confidence            5678999999999999999999998887766666655554 567799999999999999999           5555555


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      ..... |.+-+-..++++.+..++.++.
T Consensus        90 ~~~~~-vk~~a~~d~~~glIycgshd~~  116 (354)
T KOG4649|consen   90 VILET-VKVRAQCDFDGGLIYCGSHDGN  116 (354)
T ss_pred             eehhh-hccceEEcCCCceEEEecCCCc
Confidence            54333 3322222256788888887776

>KOG0882|consensus

Probab=98.63  E-value=6.1e-07  Score=80.36  Aligned_cols=268  Identities=16%  Similarity=0.129  Sum_probs=171.4

Q ss_pred             chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCe
Q psy10942        148 FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKT  227 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~  227 (537)
                      |.+.|+.+.-  .-.+++..++-++.    +                 +.|-.       ....-.--...+..|  -..
T Consensus         8 hrd~i~hv~~--tka~fiiqASlDGh----~-----------------KFWkK-------s~isGvEfVKhFraH--L~~   55 (558)
T KOG0882|consen    8 HRDVITHVFP--TKAKFIIQASLDGH----K-----------------KFWKK-------SRISGVEFVKHFRAH--LGV   55 (558)
T ss_pred             ccceeeeEee--ehhheEEeeecchh----h-----------------hhcCC-------CCccceeehhhhHHH--HHH
Confidence            5554555433  34567778888777    8                 88865       321111000122278  888


Q ss_pred             EEEEeccCcccCCCeeeeccC-CCcceeccccccCCCcccccc--cccccceeeeeeCCcceEEEE-EeCCCeEEEEECC
Q psy10942        228 VTLLERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGI--FVPEAEHGAFYTGGTVELLAS-GSLDKTVKVWSTT  303 (537)
Q Consensus       228 v~~~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~l~~-~~~d~~i~i~~~~  303 (537)
                      |.++   +.+-++.++.+.+. |..++  ++++.+-.......  ..|....+....+..+..++. .-.++.+.++|-.
T Consensus        56 I~sl---~~S~dg~L~~Sv~d~Dhs~K--vfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~  130 (558)
T KOG0882|consen   56 ILSL---AVSYDGWLFRSVEDPDHSVK--VFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGF  130 (558)
T ss_pred             HHhh---hccccceeEeeccCccccee--EEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCc
Confidence            9999   99999999999777 99999  99988744321111  111111111111122234444 4466899999977


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee-EEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL-NVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                      ...+..   .....-|..+|.++.+++-+..+++....|.|.-|......+.. ..+.                   |.+
T Consensus       131 ~d~~q~---~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~-------------------~~~  188 (558)
T KOG0882|consen  131 GDFCQD---GYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLN-------------------FEL  188 (558)
T ss_pred             CCcCcc---ceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCcccccc-------------------ccc
Confidence            654321   23345689999999999999999999989999999987311111 1111                   122


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee-----------
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE-----------  451 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------  451 (537)
                      ....-+..+.....                 ...++.|+|++..+.+-+.|..|++++.++++.++.+.           
T Consensus       189 K~eTdLy~f~K~Kt-----------------~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~k  251 (558)
T KOG0882|consen  189 KHETDLYGFPKAKT-----------------EPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPK  251 (558)
T ss_pred             cccchhhccccccc-----------------CccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccc
Confidence            22222222211111                 56789999999999999999999999998877655442           


Q ss_pred             ---------------------cCCc-ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        452 ---------------------GHDA-SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       452 ---------------------~~~~-~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                                           .|.. .-+.+.|...+++|+-++-=| |++.++.+++..+.+
T Consensus       252 s~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~  313 (558)
T KOG0882|consen  252 SPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL  313 (558)
T ss_pred             cccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence                                 1111 235678888999999888776 899999999887766

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.62  E-value=0.00014  Score=64.65  Aligned_cols=210  Identities=13%  Similarity=0.013  Sum_probs=119.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEccCCceeeEEEEec--
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS-PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH--  362 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--  362 (537)
                      .++++-...+.|..|+..++....      ...  .....+++. +++ .|+.+..++ +.++|+. ..+........  
T Consensus        13 ~l~~~D~~~~~i~~~~~~~~~~~~------~~~--~~~~G~~~~~~~g-~l~v~~~~~-~~~~d~~-~g~~~~~~~~~~~   81 (246)
T PF08450_consen   13 RLYWVDIPGGRIYRVDPDTGEVEV------IDL--PGPNGMAFDRPDG-RLYVADSGG-IAVVDPD-TGKVTVLADLPDG   81 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEE------EES--SSEEEEEEECTTS-EEEEEETTC-EEEEETT-TTEEEEEEEEETT
T ss_pred             EEEEEEcCCCEEEEEECCCCeEEE------Eec--CCCceEEEEccCC-EEEEEEcCc-eEEEecC-CCcEEEEeeccCC
Confidence            356666678899999998876422      111  126778888 565 555555544 5666877 44433333331  


Q ss_pred             C-CCC--EEEEEcCCCcEEEEECCCCe-------eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE-Ee
Q psy10942        363 K-KGT--QIVSTGADGLLKLWSIKTST-------CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS-SS  431 (537)
Q Consensus       363 ~-~~~--~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~  431 (537)
                      . ...  .=+....+|.+.+=+.....       .+..+... ..+..+. ..      ....+.++|+|+++.|+. -+
T Consensus        82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~------~~~pNGi~~s~dg~~lyv~ds  153 (246)
T PF08450_consen   82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DG------LGFPNGIAFSPDGKTLYVADS  153 (246)
T ss_dssp             CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EE------ESSEEEEEEETTSSEEEEEET
T ss_pred             CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cC------cccccceEECCcchheeeccc
Confidence            1 101  11233444554444432211       01111111 1111110 00      014678999999987764 45


Q ss_pred             CCCcEEEEECCC--c-----eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCC
Q psy10942        432 GDATIKLWCLTD--Y-----VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDS  504 (537)
Q Consensus       432 ~dg~i~i~d~~~--~-----~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~  504 (537)
                      ..+.|..+++..  .     +....+....+..-.+++..+|++.++....+.|.+++.+ |+.+..+......+     
T Consensus       154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~-----  227 (246)
T PF08450_consen  154 FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRP-----  227 (246)
T ss_dssp             TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSE-----
T ss_pred             ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCE-----
Confidence            678899998853  2     1122222222347889999999988888889999999986 99888887664566     


Q ss_pred             CCCCccccccceee-ecCCCEEEEEe
Q psy10942        505 ENDHKGFGLPRQLC-SRNSDCEYRGG  529 (537)
Q Consensus       505 ~~~~~~~~~~~~~~-s~~~~~l~s~~  529 (537)
                            +++   +| .++.+.|+..+
T Consensus       228 ------t~~---~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  228 ------TNC---AFGGPDGKTLYVTT  244 (246)
T ss_dssp             ------EEE---EEESTTSSEEEEEE
T ss_pred             ------EEE---EEECCCCCEEEEEe
Confidence                  888   99 47777776544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4714|consensus

Probab=98.62  E-value=6.6e-07  Score=74.32  Aligned_cols=200  Identities=10%  Similarity=0.032  Sum_probs=113.1

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcce-----EEEEEeccccEEEEEeC-----CceEEEEecccccCccccccc
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPL-----VRIVRSSVKRMYAVVTA-----DHNISLYRLNSETGLEERPNK  137 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v-----~~~~~s~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~~  137 (537)
                      .-+++++.||.+.+.+.+.   +..+....++     .+..+...++.+.++.-     -+..+.|+++..         
T Consensus       102 t~V~~~~~dg~~~v~s~~~---~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~---------  169 (319)
T KOG4714|consen  102 NRVCIGYADGSLAVFSTDK---DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPI---------  169 (319)
T ss_pred             CceEecCCCceEEEEechH---HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccc---------
Confidence            5699999999999998776   2222222111     11222233444433221     123455655541         


Q ss_pred             ccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---c
Q psy10942        138 ILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---K  214 (537)
Q Consensus       138 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l  214 (537)
                        .....-......|.+++-+|...+.++.++.++.    +                 .+||.       +.....   +
T Consensus       170 --~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~----~-----------------~l~d~-------rn~~~p~S~l  219 (319)
T KOG4714|consen  170 --KTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGI----V-----------------GLWDA-------RNVAMPVSLL  219 (319)
T ss_pred             --ccccccccccccchhhhCCcccccEEEEecCCCe----E-----------------EEEEc-------ccccchHHHH
Confidence              1111111112238999999655555556666655    8                 88998       555333   6


Q ss_pred             cccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  293 (537)
                      +     .|  ..++..+   .|+| ++..|++++.||.+.  .|+..+.                        .|..+..
T Consensus       220 ~-----ah--k~~i~eV---~FHpk~p~~Lft~sedGslw--~wdas~~------------------------~l~i~~~  263 (319)
T KOG4714|consen  220 K-----AH--KAEIWEV---HFHPKNPEHLFTCSEDGSLW--HWDASTT------------------------FLSISNQ  263 (319)
T ss_pred             H-----Hh--hhhhhhe---eccCCCchheeEecCCCcEE--EEcCCCc------------------------eEEecCc
Confidence            6     99  9999999   9998 568999999999999  9998751                        2222222


Q ss_pred             CCeEEEEECCCCcee-eeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        294 DKTVKVWSTTGGLKL-LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS  348 (537)
Q Consensus       294 d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d  348 (537)
                      ...+..|=-....+. .++ ...+......|+++..  -|..|++|+.-+.|++++
T Consensus       264 ~s~~s~WLsgD~v~s~i~i-~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  264 ASVISSWLSGDPVKSRIEI-TSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             cccccccccCCcccceEee-eccccccceeeeeeec--cCceEEeccccceEEEec
Confidence            233344422111110 000 1122222334555444  477888888888888764

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.61  E-value=0.0001  Score=65.31  Aligned_cols=185  Identities=16%  Similarity=0.049  Sum_probs=116.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE-EEec-C
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV-LRGH-K  363 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~-~  363 (537)
                      ..+++++.++.+..||..+++...+...   .......  .  ..++..+++++.++.++.+|.. .++.+-. .... +
T Consensus        37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~---~~~~~~~--~--~~~~~~v~v~~~~~~l~~~d~~-tG~~~W~~~~~~~~  108 (238)
T PF13360_consen   37 GRVYVASGDGNLYALDAKTGKVLWRFDL---PGPISGA--P--VVDGGRVYVGTSDGSLYALDAK-TGKVLWSIYLTSSP  108 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSEEEEEEEC---SSCGGSG--E--EEETTEEEEEETTSEEEEEETT-TSCEEEEEEE-SSC
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEeec---cccccce--e--eecccccccccceeeeEecccC-Ccceeeeecccccc
Confidence            4677778999999999999987654411   1111111  1  2245566777788899999987 4444444 2222 1


Q ss_pred             ------------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce-EEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942        364 ------------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI-WTLAITKDENQIITGGVWFVNFSPLDRILISS  430 (537)
Q Consensus       364 ------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  430 (537)
                                  .+..++.+..++.+..+|+++|+.+.......... ..+..        ...+..-....++ .+..+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~v~~~  179 (238)
T PF13360_consen  109 PAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISS--------FSDINGSPVISDG-RVYVS  179 (238)
T ss_dssp             TCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEE--------ETTEEEEEECCTT-EEEEE
T ss_pred             ccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceee--------ecccccceEEECC-EEEEE
Confidence                        16778888889999999999999988776543221 00100        0012222222344 66666


Q ss_pred             eCCCc-EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        431 SGDAT-IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       431 ~~dg~-i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      ..++. +.+ |+.+++.+....  ...+.. ....++..|+.++.++.|..||+++|+.+.+
T Consensus       180 ~~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  180 SGDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             CCTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             cCCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence            77775 555 999998765333  222332 1456778888888999999999999997654

...

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.56  E-value=4.5e-05  Score=67.95  Aligned_cols=59  Identities=10%  Similarity=0.173  Sum_probs=45.0

Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEecC
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      .|.++|+.+++.+.++.. ..++.+|..+.+.+ +|++.+ .++.+.+||..+|+.++.++.
T Consensus       270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            478889999999999874 35688999999765 665554 578999999999999988864

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.55  E-value=2.8e-05  Score=69.18  Aligned_cols=236  Identities=13%  Similarity=0.033  Sum_probs=135.4

Q ss_pred             EEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccc
Q psy10942        101 RIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLS  179 (537)
Q Consensus       101 ~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~  179 (537)
                      +++|.+ ++.++++-...+.|..|+..++           ... .+....  ...+++..++ +.++++...+     + 
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~-----------~~~-~~~~~~--~~G~~~~~~~-g~l~v~~~~~-----~-   62 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTG-----------EVE-VIDLPG--PNGMAFDRPD-GRLYVADSGG-----I-   62 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTT-----------EEE-EEESSS--EEEEEEECTT-SEEEEEETTC-----E-
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCC-----------eEE-EEecCC--CceEEEEccC-CEEEEEEcCc-----e-
Confidence            577887 6777777667889999999882           222 222222  5666776334 5555655444     3 


Q ss_pred             ceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc-CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccc
Q psy10942        180 GLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG-RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELE  257 (537)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~-h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw  257 (537)
                                      .++|.       .+++.. +....... .  ......+   ++.|+|++.++........  ..
T Consensus        63 ----------------~~~d~-------~~g~~~~~~~~~~~~~~--~~~~ND~---~vd~~G~ly~t~~~~~~~~--~~  112 (246)
T PF08450_consen   63 ----------------AVVDP-------DTGKVTVLADLPDGGVP--FNRPNDV---AVDPDGNLYVTDSGGGGAS--GI  112 (246)
T ss_dssp             ----------------EEEET-------TTTEEEEEEEEETTCSC--TEEEEEE---EE-TTS-EEEEEECCBCTT--CG
T ss_pred             ----------------EEEec-------CCCcEEEEeeccCCCcc--cCCCceE---EEcCCCCEEEEecCCCccc--cc
Confidence                            34466       555444 22111012 3  5667788   8999998666655433222  00


Q ss_pred             cccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE
Q psy10942        258 KRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS  337 (537)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  337 (537)
                      +                                   .|.|..++.. ++.. .     ....-...+.|+|+|+++.|+.
T Consensus       113 ~-----------------------------------~g~v~~~~~~-~~~~-~-----~~~~~~~pNGi~~s~dg~~lyv  150 (246)
T PF08450_consen  113 D-----------------------------------PGSVYRIDPD-GKVT-V-----VADGLGFPNGIAFSPDGKTLYV  150 (246)
T ss_dssp             G-----------------------------------SEEEEEEETT-SEEE-E-----EEEEESSEEEEEEETTSSEEEE
T ss_pred             c-----------------------------------ccceEEECCC-CeEE-E-----EecCcccccceEECCcchheee
Confidence            0                                   0344445554 2211 1     1112234689999999997764


Q ss_pred             -EeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942        338 -GSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW  416 (537)
Q Consensus       338 -~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~  416 (537)
                       -+..+.|..+++......+.....                 +.++...         .                 +..-
T Consensus       151 ~ds~~~~i~~~~~~~~~~~~~~~~~-----------------~~~~~~~---------~-----------------g~pD  187 (246)
T PF08450_consen  151 ADSFNGRIWRFDLDADGGELSNRRV-----------------FIDFPGG---------P-----------------GYPD  187 (246)
T ss_dssp             EETTTTEEEEEEEETTTCCEEEEEE-----------------EEE-SSS---------S-----------------CEEE
T ss_pred             cccccceeEEEeccccccceeeeee-----------------EEEcCCC---------C-----------------cCCC
Confidence             456677888888632221111000                 0010000         0                 1456


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe-cCCCEEEEEe
Q psy10942        417 FVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI-NKGTQIVSTG  473 (537)
Q Consensus       417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~  473 (537)
                      .++++.+|++.++....+.|.+++.. ++.+..+......+++++|. ++.+.|+..+
T Consensus       188 G~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  188 GLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             EEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             cceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            78899999988888888999999987 88888887665689999995 5656665443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2695|consensus

Probab=98.52  E-value=2.9e-07  Score=79.54  Aligned_cols=111  Identities=16%  Similarity=0.304  Sum_probs=89.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-----eeeeEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCCCe
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDY-----VCLKSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      .|.++.|...++++..|..+|.|..+|++..     .+...+- |...|+++..-. ++++|.+.+.+|.|++||++--+
T Consensus       254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K  332 (425)
T KOG2695|consen  254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATK  332 (425)
T ss_pred             hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhh
Confidence            5777778888899999999999999999864     3444554 888999988766 77899999999999999998766


Q ss_pred             e---EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        488 C---VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       488 ~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +   +.++++|...-.         ..-+   -..+....++++++|-..|||
T Consensus       333 ~~~~V~qYeGHvN~~a---------~l~~---~v~~eeg~I~s~GdDcytRiW  373 (425)
T KOG2695|consen  333 CKKSVMQYEGHVNLSA---------YLPA---HVKEEEGSIFSVGDDCYTRIW  373 (425)
T ss_pred             cccceeeeeccccccc---------cccc---ccccccceEEEccCeeEEEEE
Confidence            6   888899876430         0222   457888899999999999999

>KOG1275|consensus

Probab=98.51  E-value=4.1e-06  Score=81.91  Aligned_cols=171  Identities=14%  Similarity=0.237  Sum_probs=125.3

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-  364 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-  364 (537)
                      ..++.|+....+..+|+.+.+...     ...-..+.|.-|..  +++.+.+|...|+|.+-|++ ..+.+..+..|.+ 
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r-----~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~-s~~~iht~~aHs~s  219 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETR-----TTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPN-SFETIHTFDAHSGS  219 (1118)
T ss_pred             cceeecchhhheeeeecccceeee-----eeeccCCceEEEEe--cCcEEEeecccceEEeecCC-cCceeeeeeccccc
Confidence            556677777778888988876422     22222234555544  68899999999999999999 8899999999976 


Q ss_pred             -------CCEEEEEcC---------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEE
Q psy10942        365 -------GTQIVSTGA---------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRIL  427 (537)
Q Consensus       365 -------~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l  427 (537)
                             |+.|++++.         |..|++||++..+.+.-+..+..                  ..-+.|.|. ...+
T Consensus       220 iSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~------------------P~flrf~Psl~t~~  281 (1118)
T KOG1275|consen  220 ISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG------------------PQFLRFHPSLTTRL  281 (1118)
T ss_pred             eeeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC------------------chhhhhcccccceE
Confidence                   888988875         45689999998877666555442                  233556665 3578


Q ss_pred             EEEeCCCcEEEEECC---Cce-eeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        428 ISSSGDATIKLWCLT---DYV-CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       428 ~~~~~dg~i~i~d~~---~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      ++.+..|...+-|..   +.. .+..+......+..+.+|+++..||.+..+|.|.+|.
T Consensus       282 ~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  282 AVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             EEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            888889999999943   321 1222233344589999999999999999999999997

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.50  E-value=1.8e-07  Score=55.64  Aligned_cols=38  Identities=24%  Similarity=0.366  Sum_probs=36.0

Q ss_pred             CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+++..+.+|...|           .++   +|+|++++|++++.|+.|++|
T Consensus         1 g~~~~~~~~h~~~i-----------~~i---~~~~~~~~~~s~~~D~~i~vw   38 (39)
T PF00400_consen    1 GKCVRTFRGHSSSI-----------NSI---AWSPDGNFLASGSSDGTIRVW   38 (39)
T ss_dssp             EEEEEEEESSSSSE-----------EEE---EEETTSSEEEEEETTSEEEEE
T ss_pred             CeEEEEEcCCCCcE-----------EEE---EEecccccceeeCCCCEEEEE
Confidence            46789999999999           999   999999999999999999998

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1275|consensus

Probab=98.42  E-value=5.4e-06  Score=81.15  Aligned_cols=172  Identities=17%  Similarity=0.159  Sum_probs=124.8

Q ss_pred             CCCEEEEEeCCCcEEEEEccCCceeeEEEEec--------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        331 NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH--------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       331 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      ++..++.|+-...+..+|++ +.+..+.....        .++..+.+|...|+|.+-|.++.+.+.++..|.+.+..  
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~-~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD--  222 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLN-TEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD--  222 (1118)
T ss_pred             CCcceeecchhhheeeeecc-cceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceee--
Confidence            34566777776777778887 44444433332        34678999999999999999999999999999885543  


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeC---------CCcEEEEECCCceeeeEeecCCcceEEEEEecC-CCEEEEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSG---------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINK-GTQIVST  472 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~  472 (537)
                                       |+-.|+.|++++.         |.-|++||++..+.+..+.-+.++ .-+.|.|. ...++++
T Consensus       223 -----------------fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~  284 (1118)
T KOG1275|consen  223 -----------------FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVT  284 (1118)
T ss_pred             -----------------eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEE
Confidence                             3344666776654         567899999988877777766555 55778884 4578889


Q ss_pred             eCCCcEEEEEC---CCCe-eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        473 GADGLLKLWSI---KTST-CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       473 ~~dg~v~vwd~---~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +..|...+-|.   .+.. -+..+......+           .++   ++|++++.||.+..+|.|.+|
T Consensus       285 S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i-----------~~f---DiSsn~~alafgd~~g~v~~w  339 (1118)
T KOG1275|consen  285 SQSGQFQFVDTATLSNPPAGVKMVNPNGSGI-----------SAF---DISSNGDALAFGDHEGHVNLW  339 (1118)
T ss_pred             ecccceeeccccccCCCccceeEEccCCCcc-----------eeE---EecCCCceEEEecccCcEeee
Confidence            99999999983   2221 112222222335           677   999999999999999999998

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.41  E-value=0.00011  Score=64.81  Aligned_cols=225  Identities=13%  Similarity=0.059  Sum_probs=125.9

Q ss_pred             CcEEEEEeCccce-EEeeeccceehhhhcCCCcc---eEEEEEeccccEEEEEeC-----CceEEEEecccccCcccccc
Q psy10942         66 GKTFVLAGGEKSL-LHYYETSAVKELYQHGLSSP---LVRIVRSSVKRMYAVVTA-----DHNISLYRLNSETGLEERPN  136 (537)
Q Consensus        66 ~~~~~~~~~~~~~-i~~wd~~~~~~~~~~~~~~~---v~~~~~s~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~  136 (537)
                      ....++.+-..|. ..+||..+++....+.....   ----.||+||++|++.-.     .|.|-|||...+        
T Consensus        16 ~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~--------   87 (305)
T PF07433_consen   16 RPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG--------   87 (305)
T ss_pred             CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC--------
Confidence            4456666655554 78899999988877765532   235689999999988533     578999999943        


Q ss_pred             cccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---
Q psy10942        137 KILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---  213 (537)
Q Consensus       137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---  213 (537)
                        .+.+.++..|.-..-.+.+. +++..|+++-+.-. +..=.|.-|++...-..+.  .+.|.       .+++.+   
T Consensus        88 --~~ri~E~~s~GIGPHel~l~-pDG~tLvVANGGI~-Thpd~GR~kLNl~tM~psL--~~ld~-------~sG~ll~q~  154 (305)
T PF07433_consen   88 --YRRIGEFPSHGIGPHELLLM-PDGETLVVANGGIE-THPDSGRAKLNLDTMQPSL--VYLDA-------RSGALLEQV  154 (305)
T ss_pred             --cEEEeEecCCCcChhhEEEc-CCCCEEEEEcCCCc-cCcccCceecChhhcCCce--EEEec-------CCCceeeee
Confidence              77788888877667788888 77777877654321 0000122222211111111  01122       233322   


Q ss_pred             -ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe
Q psy10942        214 -KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS  292 (537)
Q Consensus       214 -l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~  292 (537)
                       +.   ...|  ...|..+   ++.++|..++..-..|         .....                    ..+++.-.
T Consensus       155 ~Lp---~~~~--~lSiRHL---a~~~~G~V~~a~Q~qg---------~~~~~--------------------~PLva~~~  197 (305)
T PF07433_consen  155 ELP---PDLH--QLSIRHL---AVDGDGTVAFAMQYQG---------DPGDA--------------------PPLVALHR  197 (305)
T ss_pred             ecC---cccc--ccceeeE---EecCCCcEEEEEecCC---------CCCcc--------------------CCeEEEEc
Confidence             21   0134  5566666   6666664444322222         11100                    02334334


Q ss_pred             CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEE
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~  358 (537)
                      .++.+.........         .......+-+|++++++..+++.+ ..+.+.+||.. .+..+..
T Consensus       198 ~g~~~~~~~~p~~~---------~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~-tg~~~~~  254 (305)
T PF07433_consen  198 RGGALRLLPAPEEQ---------WRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAA-TGRLLGS  254 (305)
T ss_pred             CCCcceeccCChHH---------HHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECC-CCCEeec
Confidence            44445555544322         233456788999999998776555 56677888777 4444433

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.35  E-value=0.00035  Score=61.65  Aligned_cols=169  Identities=14%  Similarity=0.183  Sum_probs=104.0

Q ss_pred             EEEEEcC-CCCEEEEEeCCCc-EEEEEccCCceeeEEEEec------------CCCCEEEEEcC-----CCcEEEEECC-
Q psy10942        324 NCVTVSP-NDKLLASGSLDKT-VKVWSTTGGLKLLNVLRGH------------KKGTQIVSTGA-----DGLLKLWSIK-  383 (537)
Q Consensus       324 ~~~~~s~-~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~------------~~~~~l~~~~~-----d~~i~i~d~~-  383 (537)
                      ..++.+| .+..++.+-.-|. ..+||.. .++....+...            ++|.+|++.-.     .|.|-+||.. 
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~-~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCR-TGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcC-CCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            3566677 4555566655554 5667776 44444444332            34677766543     4678888887 


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEe-----------------------------------------------eee
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITG-----------------------------------------------GVW  416 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------------------------------~i~  416 (537)
                      +.+.+.++..+-.....+.+.|+++.++.+                                               .|.
T Consensus        87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR  166 (305)
T PF07433_consen   87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR  166 (305)
T ss_pred             CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence            556777777776666777777777655542                                               256


Q ss_pred             EEEEcCCCCEEEEEeCCCc-------EEEEECCCceeeeEee-------cCCcceEEEEEecCCCEEEEEe-CCCcEEEE
Q psy10942        417 FVNFSPLDRILISSSGDAT-------IKLWCLTDYVCLKSLE-------GHDASVLRCHFINKGTQIVSTG-ADGLLKLW  481 (537)
Q Consensus       417 ~~~~s~~~~~l~~~~~dg~-------i~i~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vw  481 (537)
                      .+++.++|..++..-..|.       |-+++.  ++.+..+.       .-.+.+-+|++++++.++++.+ .-+.+.+|
T Consensus       167 HLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~  244 (305)
T PF07433_consen  167 HLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW  244 (305)
T ss_pred             eEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence            6666666655554433321       222222  22222221       2345688999999998876555 56789999


Q ss_pred             ECCCCeeEEEecCC
Q psy10942        482 SIKTSTCVSTFDKH  495 (537)
Q Consensus       482 d~~~~~~~~~~~~~  495 (537)
                      |..+++.+....-.
T Consensus       245 d~~tg~~~~~~~l~  258 (305)
T PF07433_consen  245 DAATGRLLGSVPLP  258 (305)
T ss_pred             ECCCCCEeeccccC
Confidence            99999988776543

>KOG2114|consensus

Probab=98.32  E-value=0.00015  Score=71.00  Aligned_cols=204  Identities=12%  Similarity=0.109  Sum_probs=123.5

Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC---------cceEEEEEeCCC-----eEEEEE
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG---------TVELLASGSLDK-----TVKVWS  301 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~l~~~~~d~-----~i~i~~  301 (537)
                      +++.+..++.|+.+|.|.  +.+-.-..          ...+..+...         .-+++++.+.|+     .+++|+
T Consensus        31 ~~s~~~~vvigt~~G~V~--~Ln~s~~~----------~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~   98 (933)
T KOG2114|consen   31 CSSSTGSVVIGTADGRVV--ILNSSFQL----------IRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWD   98 (933)
T ss_pred             EcCCCceEEEeeccccEE--Eeccccee----------eehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEec
Confidence            488899999999999887  65544311          1222222221         004666666554     589999


Q ss_pred             CCCCcee-----e---eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-CceeeEEEEecCCCCEEEEEc
Q psy10942        302 TTGGLKL-----L---NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG-GLKLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       302 ~~~~~~~-----~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~l~~~~  372 (537)
                      ++..+..     .   +...........++.+++.+.+-+.+++|-.+|.|..+.=.- ..+-.+               
T Consensus        99 lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr---------------  163 (933)
T KOG2114|consen   99 LEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSR---------------  163 (933)
T ss_pred             ccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccc---------------
Confidence            8654211     1   111111222456788899998888899999999888774220 000000               


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee-eeEee
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC-LKSLE  451 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~  451 (537)
                                                  ..++..++.    +|+.+++..+++.++....-..|.+|.+....+ ...+.
T Consensus       164 ----------------------------~~~~~~~~~----pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld  211 (933)
T KOG2114|consen  164 ----------------------------QDYSHRGKE----PITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLD  211 (933)
T ss_pred             ----------------------------eeeeccCCC----CceeeEEecCCceeEEEEecceeEEEEecCCCcceeeec
Confidence                                        001111111    788888888887633333446899999885443 44477


Q ss_pred             cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec-CCccce
Q psy10942        452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD-KHALKI  499 (537)
Q Consensus       452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-~~~~~i  499 (537)
                      .|..+++|..|++....+++++.. .+.+|+.+....-..+. +|....
T Consensus       212 ~~G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~~cfaf~~g~kk~~  259 (933)
T KOG2114|consen  212 NNGISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRGPCFAFEVGEKKEM  259 (933)
T ss_pred             cCCccceeeecCCCCccEEEecCc-eEEEEcCCCcceeeeecCCCeEEE
Confidence            788889999998866645555444 59999987666556666 655433

>KOG1920|consensus

Probab=98.25  E-value=5.9e-05  Score=76.66  Aligned_cols=221  Identities=11%  Similarity=0.001  Sum_probs=125.0

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-  364 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-  364 (537)
                      +.++.+...|.|.+-|.++...      .....-...|.+++|+||++.++..+.++++.+-+-.  ..++.....+.+ 
T Consensus        81 ~~i~v~~~~G~iilvd~et~~~------eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~--f~~i~E~~L~~d~  152 (1265)
T KOG1920|consen   81 NSICVITALGDIILVDPETLEL------EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKD--FEPIAEKPLDADD  152 (1265)
T ss_pred             ceEEEEecCCcEEEEcccccce------eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecc--ccchhcccccccc
Confidence            3567777888899888877652      2233446789999999999999999988887765432  222211111111 


Q ss_pred             --CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-----CCCcEE
Q psy10942        365 --GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-----GDATIK  437 (537)
Q Consensus       365 --~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~i~  437 (537)
                        ....+.++....=.-+.-..++...     ...+....+.++-  -....-+++.|--||+++|+..     ....|+
T Consensus       153 ~~~sk~v~VGwGrkeTqfrgs~gr~~~-----~~~~~~ek~~~~~--~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir  225 (1265)
T KOG1920|consen  153 ERKSKFVNVGWGRKETQFRGSEGRQAA-----RQKIEKEKALEQI--EQDDHKTSISWRGDGEYFAVSFVESETGTRKIR  225 (1265)
T ss_pred             ccccccceecccccceeeecchhhhcc-----cccccccccccch--hhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence              1223333332211111111110000     0000000000000  0000345688999999999842     237899


Q ss_pred             EEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe---CCCcEEEEECCCCeeEEEec----CCccceeccCCCCCCcc
Q psy10942        438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG---ADGLLKLWSIKTSTCVSTFD----KHALKIRNSDSENDHKG  510 (537)
Q Consensus       438 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~---~dg~v~vwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~~  510 (537)
                      +||-. |.+-..-..-.+.-.+++|-|.|..+++-.   .|+.|.++.- +|-.-..+.    ....++           
T Consensus       226 V~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~v-----------  292 (1265)
T KOG1920|consen  226 VYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEV-----------  292 (1265)
T ss_pred             Eeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccch-----------
Confidence            99976 433333222333446799999999998764   3567999984 554333322    222235           


Q ss_pred             ccccceeeecCCCEEEE---EeCCCCEEeC
Q psy10942        511 FGLPRQLCSRNSDCEYR---GGWSPQVVVY  537 (537)
Q Consensus       511 ~~~~~~~~s~~~~~l~s---~~~dg~i~vW  537 (537)
                      ..+   +|+.++..||+   ......|++|
T Consensus       293 e~L---~Wns~sdiLAv~~~~~e~~~v~lw  319 (1265)
T KOG1920|consen  293 EEL---AWNSNSDILAVVTSNLENSLVQLW  319 (1265)
T ss_pred             hee---eecCCCCceeeeecccccceEEEE
Confidence            677   99999999997   4444448888

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.25  E-value=0.0014  Score=61.64  Aligned_cols=52  Identities=17%  Similarity=0.038  Sum_probs=40.1

Q ss_pred             ccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         75 EKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      ..+.+.+||+++++..........+....|||+|+++|.... +.|.+++..+
T Consensus        21 ~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~-~nly~~~~~~   72 (353)
T PF00930_consen   21 FKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD-NNLYLRDLAT   72 (353)
T ss_dssp             EEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET-TEEEEESSTT
T ss_pred             cceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEec-CceEEEECCC
Confidence            356799999998765544444578999999999999998764 7899998877

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1832|consensus

Probab=98.24  E-value=5e-07  Score=87.76  Aligned_cols=180  Identities=14%  Similarity=0.229  Sum_probs=130.3

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEecC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRGHK  363 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~  363 (537)
                      +.++.|+..|.|++|++.++..     ......|.++|+-+.-+.||..+++.+.-.  -..+|++.....+...+....
T Consensus      1114 ~hL~vG~~~Geik~~nv~sG~~-----e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed~ 1188 (1516)
T KOG1832|consen 1114 NHLAVGSHAGEIKIFNVSSGSM-----EESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDEDK 1188 (1516)
T ss_pred             ceEEeeeccceEEEEEccCccc-----cccccccccccccccccCCcceeeeeccccCchHHHhccccccCccccccccc
Confidence            7899999999999999999976     667789999999999999999887765443  367899987666666655433


Q ss_pred             C------CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEE
Q psy10942        364 K------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIK  437 (537)
Q Consensus       364 ~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~  437 (537)
                      .      ...-+.|+......+||+.++.++.++-.....   ..+          .-+...|+|+..+++   .||  .
T Consensus      1189 ~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~---~~y----------~~n~a~FsP~D~LIl---ndG--v 1250 (1516)
T KOG1832|consen 1189 AVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVT---SSY----------SNNLAHFSPCDTLIL---NDG--V 1250 (1516)
T ss_pred             eeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchh---hhh----------hccccccCCCcceEe---eCc--e
Confidence            2      233345566678899999999877764222110   000          235677999988776   455  4


Q ss_pred             EEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       438 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      +||.+..+.++.|...... ..-.|+|.|..++.-++     |||+++.++++....
T Consensus      1251 LWDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~ 1301 (1516)
T KOG1832|consen 1251 LWDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPS 1301 (1516)
T ss_pred             eeeeccHHHHhhhhhheec-ccccccCCCceEEeech-----hhhhHHHHHHhcCcc
Confidence            7999988878777654422 23469999999888664     999999887766543

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.21  E-value=0.00045  Score=67.95  Aligned_cols=109  Identities=13%  Similarity=0.144  Sum_probs=66.2

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccc-cce-eeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYES-LET-CAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY   91 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~   91 (537)
                      -.+..++.++.++.|.-.|.++|+.+-+.+.... ... ..++..+.   ... +...++.++.++.|..+|.++|+.+.
T Consensus        59 v~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~---~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W  134 (488)
T cd00216          59 VVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGV---AYW-DPRKVFFGTFDGRLVALDAETGKQVW  134 (488)
T ss_pred             EECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCc---EEc-cCCeEEEecCCCeEEEEECCCCCEee
Confidence            3455677788889999999999998877654332 100 00000000   000 21467777789999999999999988


Q ss_pred             hcCCCcc------eE-EEEEeccccEEEEEe---------CCceEEEEecccc
Q psy10942         92 QHGLSSP------LV-RIVRSSVKRMYAVVT---------ADHNISLYRLNSE  128 (537)
Q Consensus        92 ~~~~~~~------v~-~~~~s~~~~~la~~~---------~d~~i~iwd~~~~  128 (537)
                      +......      +. +..+. + ..+++++         .++.+.-+|..++
T Consensus       135 ~~~~~~~~~~~~~i~ssP~v~-~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG  185 (488)
T cd00216         135 KFGNNDQVPPGYTMTGAPTIV-K-KLVIIGSSGAEFFACGVRGALRAYDVETG  185 (488)
T ss_pred             eecCCCCcCcceEecCCCEEE-C-CEEEEeccccccccCCCCcEEEEEECCCC
Confidence            8775543      11 11222 2 3444443         3577888898883

The alignment model contains an 8-bladed beta-propeller.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.15  E-value=0.0029  Score=62.30  Aligned_cols=194  Identities=12%  Similarity=0.130  Sum_probs=107.3

Q ss_pred             CCCeEEEEECCCCceeeeeeccccc-----c---------cC-CCe-EEEEEcCCCCEEEEEeCCC--------------
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKK-----G---------HE-KDI-NCVTVSPNDKLLASGSLDK--------------  342 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~-----~---------~~-~~v-~~~~~s~~~~~l~~~~~d~--------------  342 (537)
                      .++.+..+|..+++...+.......     .         +. ..+ ...++.+.+..++.++.++              
T Consensus       173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~  252 (488)
T cd00216         173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDN  252 (488)
T ss_pred             CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCC
Confidence            3678999999998876543111000     0         00 011 1345555667788887665              


Q ss_pred             ----cEEEEEccCCceeeEEEE-ecC-------------------CC---CEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        343 ----TVKVWSTTGGLKLLNVLR-GHK-------------------KG---TQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       343 ----~i~i~d~~~~~~~~~~~~-~~~-------------------~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                          .+.-+|..+ ++..-... .+.                   ++   ..++.++.+|.+...|.++++.+.......
T Consensus       253 ~~~~~l~Ald~~t-G~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~  331 (488)
T cd00216         253 LYTDSIVALDADT-GKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE  331 (488)
T ss_pred             CceeeEEEEcCCC-CCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec
Confidence                688888873 33332221 110                   11   257788889999999999999887654321


Q ss_pred             cceEEEEEecCCCceEEeee-eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC--------cce--EEEEEec
Q psy10942        396 LKIWTLAITKDENQIITGGV-WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD--------ASV--LRCHFIN  464 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------~~v--~~~~~s~  464 (537)
                         ..+..+|  ..+..+.. ....+......+.....+|.+.-.|+.+++.+.+.....        .+.  ..+.  -
T Consensus       332 ---~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~  404 (488)
T cd00216         332 ---QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--T  404 (488)
T ss_pred             ---cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE--e
Confidence               0111222  11100000 000000000001111245778888888888777665321        111  1122  2


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      .+..|+.++.||.++.+|.++|+.+..++.
T Consensus       405 ~g~~v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         405 AGNLVFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence            456888999999999999999999988765

The alignment model contains an 8-bladed beta-propeller.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.11  E-value=0.0016  Score=58.32  Aligned_cols=109  Identities=8%  Similarity=0.042  Sum_probs=71.7

Q ss_pred             eeeeccCCcceEEEec----------CcceEEEEEcCccceeeeeccccc--ccee----eeEeecCccccccCCcEEEE
Q psy10942          8 FDVIPQITSEFSVHCG----------RDKVLFTWDLSSRKQLRSYPAYES--LETC----AVFHLSDETESKSGGKTFVL   71 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~----------~~g~v~iwd~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~   71 (537)
                      +..+  +|++.+++++          +.-.|.+||.++-+....+.....  ....    .+.+++        ++++++
T Consensus        41 ~~~s--pdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~--------dgk~~~  110 (342)
T PF06433_consen   41 VALS--PDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSA--------DGKFLY  110 (342)
T ss_dssp             EEE---TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-T--------TSSEEE
T ss_pred             eeEC--CCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEcc--------CCcEEE
Confidence            4566  8999888753          456799999999988885553322  2111    112233        555555


Q ss_pred             E--eCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccc
Q psy10942         72 A--GGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSE  128 (537)
Q Consensus        72 ~--~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~  128 (537)
                      +  .+....|.|-|++.++.+.++..++...-.-.-++  -+.+.+.||.+.-..++..
T Consensus       111 V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~--~F~~lC~DGsl~~v~Ld~~  167 (342)
T PF06433_consen  111 VQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNR--GFSMLCGDGSLLTVTLDAD  167 (342)
T ss_dssp             EEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETT--EEEEEETTSCEEEEEETST
T ss_pred             EEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCC--ceEEEecCCceEEEEECCC
Confidence            5  45566799999999999888887765544433333  3667788999999988863

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG3621|consensus

Probab=98.10  E-value=0.00016  Score=69.34  Aligned_cols=120  Identities=8%  Similarity=0.002  Sum_probs=81.6

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      +..|.--+++..+++++.|+.-|.+.+|+-.++          ........+..+.+...+.+ +++.++++++.++.  
T Consensus        33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~----------~~~~~~~~~~~~~~~~~~vs-~~e~lvAagt~~g~--   99 (726)
T KOG3621|consen   33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTG----------EMRKLKNEGATGITCVRSVS-SVEYLVAAGTASGR--   99 (726)
T ss_pred             cceEEEEEeecCCceEEEecccceEEEEecCch----------hhhcccccCccceEEEEEec-chhHhhhhhcCCce--
Confidence            345666677888999999999999999998874          22233333344445555566 56666666666555  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                        |                 .++.+       +.....   +-...-..|  ...|+++   +|++++..+++|...|.+
T Consensus       100 --V-----------------~v~ql-------~~~~p~~~~~~t~~d~~~--~~rVTal---~Ws~~~~k~ysGD~~Gkv  148 (726)
T KOG3621|consen  100 --V-----------------SVFQL-------NKELPRDLDYVTPCDKSH--KCRVTAL---EWSKNGMKLYSGDSQGKV  148 (726)
T ss_pred             --E-----------------Eeehh-------hccCCCcceeeccccccC--CceEEEE---EecccccEEeecCCCceE
Confidence              7                 66666       322111   110111247  8899999   999999999999999999


Q ss_pred             eeccccccC
Q psy10942        253 LEELEKRKT  261 (537)
Q Consensus       253 ~~~iw~~~~  261 (537)
                      .  .-.++.
T Consensus       149 ~--~~~L~s  155 (726)
T KOG3621|consen  149 V--LTELDS  155 (726)
T ss_pred             E--EEEech
Confidence            8  666665

>KOG1920|consensus

Probab=98.05  E-value=0.0028  Score=65.09  Aligned_cols=217  Identities=14%  Similarity=0.126  Sum_probs=120.6

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.|.++.|-.++..++.+..+|.|.+-|.++           .. ......-.+.|.+++|+ +|+..++.+++...   
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et-----------~~-~eivg~vd~GI~aaswS-~Dee~l~liT~~~t---  132 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPET-----------LE-LEIVGNVDNGISAASWS-PDEELLALITGRQT---  132 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccc-----------cc-eeeeeeccCceEEEeec-CCCcEEEEEeCCcE---
Confidence            5899999999999999999999999998887           22 22223335569999999 78888888887655   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhc----ccccc----------ccc-------ccccccC-------CCcCeE
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFK----QSSSQ----------QKH-------NTERLGR-------DELKTV  228 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~----~~~~~----------~l~-------~~~~~~h-------~~~~~v  228 (537)
                       +             -+|.+-|++.++....    +..+.          +++       ..+...+       ...+.=
T Consensus       133 -l-------------l~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~  198 (1265)
T KOG1920|consen  133 -L-------------LFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHK  198 (1265)
T ss_pred             -E-------------EEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCC
Confidence             4             0111222222211110    00000          000       0000000       001122


Q ss_pred             EEEeccCcccCCCeeee-----ccCCCcceeccccccCCCcccccccccccceeeeeeCCcc-eEEEEEeCCCeEEEEEC
Q psy10942        229 TLLERGKTVKEEDLFPR-----QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-ELLASGSLDKTVKVWST  302 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~-----~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~l~~~~~d~~i~i~~~  302 (537)
                      .++   .|--||+++|+     ....+.++  +|+.+..-.............+.+.+.++. ..+-.-..|+.|.+|..
T Consensus       199 ~~I---sWRgDg~~fAVs~~~~~~~~Rkir--V~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr  273 (1265)
T KOG1920|consen  199 TSI---SWRGDGEYFAVSFVESETGTRKIR--VYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER  273 (1265)
T ss_pred             ceE---EEccCCcEEEEEEEeccCCceeEE--EecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence            357   78889999997     33347899  999883111000000000112222222221 22222345668999987


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEE---EeCCCcEEEEEcc
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS---GSLDKTVKVWSTT  350 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~---~~~d~~i~i~d~~  350 (537)
                      ++-..-.-  .........++..++|+.++..|++   ......|++|-+.
T Consensus       274 NGL~hg~f--~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~  322 (1265)
T KOG1920|consen  274 NGLRHGEF--VLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTG  322 (1265)
T ss_pred             CCcccccc--ccCCcccccchheeeecCCCCceeeeecccccceEEEEEec
Confidence            76543211  1112223344899999999999988   4455559999887

>KOG2114|consensus

Probab=98.05  E-value=0.00066  Score=66.78  Aligned_cols=167  Identities=12%  Similarity=0.176  Sum_probs=101.5

Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-----------CCEEEEEcCCC-----cEEEEECCCCeeeee
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----------GTQIVSTGADG-----LLKLWSIKTSTCVST  390 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------~~~l~~~~~d~-----~i~i~d~~~~~~~~~  390 (537)
                      +|++.+..++.|+.+|.|.+++-.  .+.++.+..++.           ..++++.+.|+     .+++||+...+.-..
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s  107 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS  107 (933)
T ss_pred             EEcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence            367889999999999988887654  444444444433           35777777664     489999875431110


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC--C--ceeeeEeecCCcceEEEEEecCC
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT--D--YVCLKSLEGHDASVLRCHFINKG  466 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~--~--~~~~~~~~~~~~~v~~~~~s~~~  466 (537)
                          ..-+......+...-.-..++.+++.+.+-+.+|+|-.||.|..+.=.  .  +....-......+|+.+++..++
T Consensus       108 ----P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~  183 (933)
T KOG2114|consen  108 ----PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDG  183 (933)
T ss_pred             ----cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCC
Confidence                000100111110000001178889999999999999999999988421  1  22222222245789999999988


Q ss_pred             CEEEEEeCCCcEEEEECCCCe-eEEEecCCccce
Q psy10942        467 TQIVSTGADGLLKLWSIKTST-CVSTFDKHALKI  499 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~i  499 (537)
                      +.++-+.....|.+|.+.... ....+..|....
T Consensus       184 ~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~l  217 (933)
T KOG2114|consen  184 KSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISL  217 (933)
T ss_pred             ceeEEEEecceeEEEEecCCCcceeeeccCCccc
Confidence            874433445579999987433 244455565555

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.04  E-value=0.002  Score=56.10  Aligned_cols=203  Identities=14%  Similarity=0.103  Sum_probs=99.1

Q ss_pred             ccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecC-----------CCCEEEEEcCCCcEEEEECC
Q psy10942        316 KKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHK-----------KGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------~~~~l~~~~~d~~i~i~d~~  383 (537)
                      +.+-...+..++|+|+.+ ++++....+.|..++..  ++.++.+....           ++.++++.-.++.+.++++.
T Consensus        17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~--G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD--GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT----EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC--CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            344456699999999765 55556667777766654  56666665543           24455555557888888774


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---ceeeeEe--------ec
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---YVCLKSL--------EG  452 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~--------~~  452 (537)
                      .........  ...-..+.+...++.    ++..++|+|.++.|+.+-...-..+|.+..   ...+...        ..
T Consensus        95 ~~~~~~~~~--~~~~~~l~~~~~~N~----G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~  168 (248)
T PF06977_consen   95 DDTTSLDRA--DVQKISLGFPNKGNK----GFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKL  168 (248)
T ss_dssp             ---TT--EE--EEEEEE---S---SS------EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT-
T ss_pred             ccccccchh--hceEEecccccCCCc----ceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccc
Confidence            322110000  000011112211211    688899999988888887776677776653   1111111        11


Q ss_pred             CCcceEEEEEecC-CCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        453 HDASVLRCHFINK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       453 ~~~~v~~~~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                      ....+.+++++|. +.+++....+..|..+| .+|+.+..+.-..+.-  --...-.++-.|   +|.++|++.++ ++-
T Consensus       169 ~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~--gl~~~~~QpEGI---a~d~~G~LYIv-sEp  241 (248)
T PF06977_consen  169 FVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFH--GLSKDIPQPEGI---AFDPDGNLYIV-SEP  241 (248)
T ss_dssp             -SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGG--G-SS---SEEEE---EE-TT--EEEE-ETT
T ss_pred             eeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCccc--CcccccCCccEE---EECCCCCEEEE-cCC
Confidence            2345788999996 45566666778899999 5788776554322100  000011233667   99999966555 444


Q ss_pred             CC
Q psy10942        532 PQ  533 (537)
Q Consensus       532 g~  533 (537)
                      +.
T Consensus       242 Nl  243 (248)
T PF06977_consen  242 NL  243 (248)
T ss_dssp             TE
T ss_pred             ce
Confidence            43

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.04  E-value=0.0048  Score=60.98  Aligned_cols=110  Identities=8%  Similarity=0.013  Sum_probs=62.9

Q ss_pred             CcceEEEecCcceEEEEEcCccceeeeeccccc--ccee-eeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYES--LETC-AVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY   91 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~   91 (537)
                      .+..++.++.++.|.-.|.++|+.+-++....+  +... ........ -..  .+..++.++.++.|.-.|..+|+.+.
T Consensus        68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg-~av--~~~~v~v~t~dg~l~ALDa~TGk~~W  144 (527)
T TIGR03075        68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRG-VAL--YDGKVFFGTLDARLVALDAKTGKVVW  144 (527)
T ss_pred             ECCEEEEECCCCcEEEEECCCCceeeEecCCCCccccccccccccccc-ceE--ECCEEEEEcCCCEEEEEECCCCCEEe
Confidence            356777777788899999999998877653221  1110 00000000 000  11246667779999999999999987


Q ss_pred             hcCCCc-----ceEEEEEeccccEEEEEeC------CceEEEEecccc
Q psy10942         92 QHGLSS-----PLVRIVRSSVKRMYAVVTA------DHNISLYRLNSE  128 (537)
Q Consensus        92 ~~~~~~-----~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~  128 (537)
                      .....+     .+.+--.--++. ++++..      ++.|.-+|.+++
T Consensus       145 ~~~~~~~~~~~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG  191 (527)
T TIGR03075       145 SKKNGDYKAGYTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTG  191 (527)
T ss_pred             ecccccccccccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCC
Confidence            765421     111111111443 444432      578888888884

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1832|consensus

Probab=98.02  E-value=7.6e-06  Score=79.90  Aligned_cols=173  Identities=18%  Similarity=0.239  Sum_probs=117.8

Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCC--cEEEEEC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADG--LLKLWSI  382 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~--~i~i~d~  382 (537)
                      .+..|....+|++|+-+.+.|++|+..|.|+++++. .+........|..          |..+++.+.-.  -..+|++
T Consensus      1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~-sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVS-SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             hhhccccceeeEEeecCCceEEeeeccceEEEEEcc-CccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence            456778889999999999999999999999999998 5555555555543          44444433222  3456666


Q ss_pred             CC-CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe-ec---CCcce
Q psy10942        383 KT-STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-EG---HDASV  457 (537)
Q Consensus       383 ~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~---~~~~v  457 (537)
                      .+ +....+|.                     .-.++.|+...+.-+.|.......+||+.++.++.++ .+   ....-
T Consensus      1175 ~s~~~~~Hsf~---------------------ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~ 1233 (1516)
T KOG1832|consen 1175 SSTGGPRHSFD---------------------EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSN 1233 (1516)
T ss_pred             ccccCcccccc---------------------ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhc
Confidence            53 23333332                     3345677776666666666678899999998877763 22   12223


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      +...|+|+..+++   .||  .+||++..+.++.|......+           ..    .|+|.|..++.-+
T Consensus      1234 n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~-----------~G----~FHP~g~eVIINS 1285 (1516)
T KOG1832|consen 1234 NLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYG-----------GG----GFHPSGNEVIINS 1285 (1516)
T ss_pred             cccccCCCcceEe---eCc--eeeeeccHHHHhhhhhheecc-----------cc----cccCCCceEEeec
Confidence            6788999988777   466  589998888777776555444           33    4888888776544

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.01  E-value=0.001  Score=60.72  Aligned_cols=74  Identities=11%  Similarity=0.047  Sum_probs=32.7

Q ss_pred             eccceehhhhcCCCcce-E-----EEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeecch-hhh
Q psy10942         83 ETSAVKELYQHGLSSPL-V-----RIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVGFS-DEI  152 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v-~-----~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v  152 (537)
                      |..+|..+.++...... .     .=+|.+||+.|+.++.   ...+.+.|+.+           ++ +.+|..+. ...
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t-----------~~-i~QLTdg~g~~~   83 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLAT-----------GE-ITQLTDGPGDNT   83 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT------------E-EEE---SS-B-T
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEccc-----------CE-EEECccCCCCCc
Confidence            66677666666654321 1     2256789988777665   44677778888           34 44555443 334


Q ss_pred             hhhhcccCCCccEEEee
Q psy10942        153 LDIALLGEEDSHIVVAS  169 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~  169 (537)
                      .....+ ++++.++..-
T Consensus        84 ~g~~~s-~~~~~~~Yv~   99 (386)
T PF14583_consen   84 FGGFLS-PDDRALYYVK   99 (386)
T ss_dssp             TT-EE--TTSSEEEEEE
T ss_pred             cceEEe-cCCCeEEEEE
Confidence            456666 5556655443

>KOG1897|consensus

Probab=97.99  E-value=0.025  Score=57.21  Aligned_cols=384  Identities=10%  Similarity=0.035  Sum_probs=187.4

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE-eec
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ-FVG  147 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~  147 (537)
                      .++-...+ .|++++-.  ..+.....++.++..+.+.+...++.++.++.+...++..+           .+... -..
T Consensus       463 ~lvQvTs~-~iRl~ss~--~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~-----------~l~e~~~~~  528 (1096)
T KOG1897|consen  463 QLVQVTSN-SIRLVSSA--GLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDG-----------GLREVSHKE  528 (1096)
T ss_pred             eEEEEecc-cEEEEcch--hhhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeecc-----------ceeeeeehe
Confidence            34444433 37887755  45666666677777777888888888888787777777662           21111 112


Q ss_pred             chhhhhhhhcccC--CCc---cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccC
Q psy10942        148 FSDEILDIALLGE--EDS---HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGR  222 (537)
Q Consensus       148 ~~~~v~~~~~~~~--~~~---~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h  222 (537)
                      ....|.|+.++|-  +.+   .++++..+..  ..+                 ..+.        +....... ..+.+.
T Consensus       529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~--~~~-----------------l~~~--------pd~~~~~~-~~l~~~  580 (1096)
T KOG1897|consen  529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDI--SMI-----------------LTFL--------PDLILITH-EQLSGE  580 (1096)
T ss_pred             ecceeEEEecccCCCCCCcceEEEEEeecce--EEE-----------------EEEC--------CCcceeee-eccCCC
Confidence            3456888888853  222   5566555443  111                 0000        00110100 000011


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc----ccccccceeeeeeCCcceEEEEEeCCCeEE
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG----IFVPEAEHGAFYTGGTVELLASGSLDKTVK  298 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~  298 (537)
                      .-+..|.-.   .+-.|..+|.++..||.+.  .+.++.......-    .+......+.......-..+++ ..|+-..
T Consensus       581 ~iPRSIl~~---~~e~d~~yLlvalgdG~l~--~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa-~sdrP~v  654 (1096)
T KOG1897|consen  581 IIPRSILLT---TFEGDIHYLLVALGDGALL--YFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFA-LSDRPTV  654 (1096)
T ss_pred             ccchheeeE---EeeccceEEEEEcCCceEE--EEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEE-eCCCCEE
Confidence            003334444   5666788999999999988  6655543221111    0000011111111111123333 3344455


Q ss_pred             EEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc----------eeeEEEEecCCCCEE
Q psy10942        299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL----------KLLNVLRGHKKGTQI  368 (537)
Q Consensus       299 i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----------~~~~~~~~~~~~~~l  368 (537)
                      +|..+..-....+ ......|-.+..+-+   -...|+++. .+.+++..+..-+          ...+.+..++....+
T Consensus       655 iY~~n~kLv~spl-s~kev~~~c~f~s~a---~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~  729 (1096)
T KOG1897|consen  655 IYSSNGKLVYSPL-SLKEVNHMCPFNSDA---YPDSLASAN-GGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTF  729 (1096)
T ss_pred             EEecCCcEEEecc-chHHhhhhccccccc---CCceEEEec-CCceEEEEecchhhcceeeecCCCChhheEecccceEE
Confidence            5554433221111 111111211111111   122344443 3456666554211          111122222222222


Q ss_pred             EEEcC-----------C---CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeC-
Q psy10942        369 VSTGA-----------D---GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSG-  432 (537)
Q Consensus       369 ~~~~~-----------d---~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~-  432 (537)
                      .+.+.           .   ..++++|-++.+.+...+...   +..+          -.+.+..|..| +.++++|.. 
T Consensus       730 ~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~---~E~~----------~Si~s~~~~~d~~t~~vVGT~~  796 (1096)
T KOG1897|consen  730 GVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFER---NETA----------LSIISCKFTDDPNTYYVVGTGL  796 (1096)
T ss_pred             EEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccc---ccee----------eeeeeeeecCCCceEEEEEEEe
Confidence            22221           1   124455544444333222111   1110          14566667777 677777753 


Q ss_pred             ---------CCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceec
Q psy10942        433 ---------DATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRN  501 (537)
Q Consensus       433 ---------dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~  501 (537)
                               .|.|.+|.....+.+.....+  .+.+.++.-- +|++||.-  ...|++|+..+.+.++.-..+..++  
T Consensus       797 v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~--  871 (1096)
T KOG1897|consen  797 VYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGI--NQSVRLYEWTTERELRIECNISNPI--  871 (1096)
T ss_pred             eccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEec--CcEEEEEEccccceehhhhcccCCe--
Confidence                     477888877663333333222  3445544322 56677654  4579999998887777666777777  


Q ss_pred             cCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                               ..+   ...-.|..+++|+--+++.
T Consensus       872 ---------~aL---~l~v~gdeI~VgDlm~Sit  893 (1096)
T KOG1897|consen  872 ---------IAL---DLQVKGDEIAVGDLMRSIT  893 (1096)
T ss_pred             ---------EEE---EEEecCcEEEEeeccceEE
Confidence                     777   8888899999887666554

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.95  E-value=0.00053  Score=66.52  Aligned_cols=182  Identities=9%  Similarity=-0.004  Sum_probs=107.1

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  365 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  365 (537)
                      ..|.+|+..|.++++-+.+.+.+.++......    +-+.--++...+.++..+..|....|.=. .-..+....+.-+|
T Consensus        67 y~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~----~~~G~G~~~esk~~l~~~~~~~~~~~gD~-HHp~~s~t~g~ydG  141 (635)
T PRK02888         67 YGFWSGGHSGEVRILGLPSMRELMRIPVFNRD----SATGWGITNESKKVLGEGARGGKYLNGDT-HHPHMSFTDGTYDG  141 (635)
T ss_pred             EEEeeCCccceEEEEecCCcceEEEeeeecCC----CCcccCCchhHHHHhhccccCCcccCCCc-CCCcccccCCccce
Confidence            46888999999999999998876554221111    11111122222223322222222333211 12223333444567


Q ss_pred             CEEEEEcC-CCcEEEEECCCCeeeeeeccCC-cceEEEEE--ecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEE
Q psy10942        366 TQIVSTGA-DGLLKLWSIKTSTCVSTFDKHA-LKIWTLAI--TKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWC  440 (537)
Q Consensus       366 ~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d  440 (537)
                      ++++.-.. +..+-..++...++-+.++.+. ..+..+.+  .|...+++.+.-..+=++|||+.+...+ ..+.+.+.|
T Consensus       142 r~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID  221 (635)
T PRK02888        142 RYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVD  221 (635)
T ss_pred             eEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEE
Confidence            77777764 5667777777666544443222 22333333  3677777777777788899998765433 357788899


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEe
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG  473 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  473 (537)
                      ..+.+...++.--. ....+.++|+|+++++.+
T Consensus       222 ~etmeV~~qV~Vdg-npd~v~~spdGk~afvTs  253 (635)
T PRK02888        222 AETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTC  253 (635)
T ss_pred             CccceEEEEEEeCC-CcccceECCCCCEEEEec
Confidence            99888777766433 446778888988888775

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.91  E-value=0.00013  Score=68.69  Aligned_cols=74  Identities=19%  Similarity=0.305  Sum_probs=57.7

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      .....|.+++++|+...|+.|+.||+|.+||............   -                                 
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~---~---------------------------------  300 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAE---F---------------------------------  300 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeec---c---------------------------------
Confidence            5567899999999999999999999999999873211111000   0                                 


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                                      ..+.++|+|+|.++++|+..|.+.+||+.-
T Consensus       301 ----------------~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  301 ----------------IPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             ----------------cceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence                            457789999999999999999999999753

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.90  E-value=0.00094  Score=63.71  Aligned_cols=139  Identities=9%  Similarity=0.060  Sum_probs=75.4

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-----EecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-----RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      ........+.++|+|+++++ +.||.-.++... ..+....-     .... .+.+++-...++|.++.--..+....+.
T Consensus        30 ~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~-~~r~k~~G~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~  106 (443)
T PF04053_consen   30 SCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTAL-AWRNKAFGSGLSFVWSS-RNRYAVLESSSTIKIYKNFKNEVVKSIK  106 (443)
T ss_dssp             E-SS--SEEEE-TTSSEEEE-EETTEEEEEETT-TTEEEEEEE-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-TT----
T ss_pred             CCCcCCeeEEECCCCCEEEE-EcCCEEEEEEcc-CCcccccCceeEEEEec-CccEEEEECCCeEEEEEcCccccceEEc
Confidence            34455789999999999998 457888888754 22222211     1222 3445555556777775222221111222


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                      ...                  .+..+-.   |.+|+..+. +.|.+||..+++.+.++...  +|..+.|++++.+++..
T Consensus       107 ~~~------------------~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~  162 (443)
T PF04053_consen  107 LPF------------------SVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALV  162 (443)
T ss_dssp             -SS-------------------EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE
T ss_pred             CCc------------------ccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEE
Confidence            111                  1111211   777777655 48999999999999998743  48999999999999998


Q ss_pred             eCCCcEEEEECC
Q psy10942        473 GADGLLKLWSIK  484 (537)
Q Consensus       473 ~~dg~v~vwd~~  484 (537)
                      +.+ .+.|++..
T Consensus       163 t~~-~i~il~~~  173 (443)
T PF04053_consen  163 TKD-SIYILKYN  173 (443)
T ss_dssp             -S--SEEEEEE-
T ss_pred             eCC-eEEEEEec
Confidence            866 57887754

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG2066|consensus

Probab=97.90  E-value=0.00075  Score=65.89  Aligned_cols=176  Identities=14%  Similarity=0.163  Sum_probs=110.9

Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--CcceEEEEEeCCCeEEEEECC
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~d~~i~i~~~~  303 (537)
                      ..+.|+   +++  ++.|+-|+.+|.++  +.+.....           .....|..  ..-.++++|+.||+|.|..+.
T Consensus        40 D~is~~---av~--~~~~~~GtH~g~v~--~~~~~~~~-----------~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~  101 (846)
T KOG2066|consen   40 DAISCC---AVH--DKFFALGTHRGAVY--LTTCQGNP-----------KTNFDHSSSILEGEYVASCSDDGKVVIGSLF  101 (846)
T ss_pred             hHHHHH---Hhh--cceeeeccccceEE--EEecCCcc-----------cccccccccccCCceEEEecCCCcEEEeecc
Confidence            445555   554  56889999999999  88777631           11112211  111699999999999999988


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEEccC-----------CceeeEEEEecCCCCE
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPN-----DKLLASGSLDKTVKVWSTTG-----------GLKLLNVLRGHKKGTQ  367 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~~~~~d~~i~i~d~~~-----------~~~~~~~~~~~~~~~~  367 (537)
                      +.+..      .......++.+++++|+     .+.+++|+.-| +.++.-+-           ...++..+..+  |++
T Consensus       102 ~~~~~------~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~l  172 (846)
T KOG2066|consen  102 TDDEI------TQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNL  172 (846)
T ss_pred             CCccc------eeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcE
Confidence            87642      22345678999999997     56889998888 77765331           11112222221  445


Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      ++-+..+| |++||..+++.+..++.....+..-.           -...+.|.++.+ |+.| +..+|++..++
T Consensus       173 IAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~-----------fpphl~W~~~~~-LVIG-W~d~v~i~~I~  233 (846)
T KOG2066|consen  173 IAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPEL-----------FPPHLHWQDEDR-LVIG-WGDSVKICSIK  233 (846)
T ss_pred             EEEecCCC-cEEEeccccceeeccCCCCCCCCccc-----------CCCceEecCCCe-EEEe-cCCeEEEEEEe
Confidence            55555554 89999999988887766554332222           223466766654 4444 44578888776

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.89  E-value=0.014  Score=55.03  Aligned_cols=90  Identities=11%  Similarity=0.073  Sum_probs=48.6

Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE-----cCCCCEEEEEeCCCcEEEEECC
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF-----SPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~-----s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      ++....+..++++...+.+...+......                 ....+++     ...+..|++-..+|.|++|.+.
T Consensus       228 ~vVvvSe~~irv~~~~~~k~~~K~~~~~~-----------------~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP  290 (395)
T PF08596_consen  228 YVVVVSESDIRVFKPPKSKGAHKSFDDPF-----------------LCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLP  290 (395)
T ss_dssp             EEEEE-SSEEEEE-TT---EEEEE-SS-E-----------------EEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETT
T ss_pred             EEEEEcccceEEEeCCCCcccceeecccc-----------------ccceEEEEeecccCCceEEEEEECCCcEEEEECC
Confidence            44455567788888877766554432211                 1111222     2245578888899999999999


Q ss_pred             CceeeeEeecCC----cceEEEEEecCCCEEEEEeC
Q psy10942        443 DYVCLKSLEGHD----ASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       443 ~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~  474 (537)
                      ..+.+..++-..    ..+....++++|..++-.+.
T Consensus       291 ~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gp  326 (395)
T PF08596_consen  291 SLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGP  326 (395)
T ss_dssp             T--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SS
T ss_pred             CchHhhcccCCCccccccccccEECCCCCEEEEeCc
Confidence            988888776532    23556778888887766654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG3621|consensus

Probab=97.87  E-value=0.0011  Score=63.86  Aligned_cols=140  Identities=11%  Similarity=0.099  Sum_probs=91.3

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh---
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE---   89 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~---   89 (537)
                      ..+++++.|+.-|.|.+++-..++....-. ..+.+... ...++        +..+++.|+..|.|.++-+..+..   
T Consensus        43 st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~-~~vs~--------~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   43 ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCV-RSVSS--------VEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             cCCceEEEecccceEEEEecCchhhhcccccCccceEEE-EEecc--------hhHhhhhhcCCceEEeehhhccCCCcc
Confidence            456899999999999999976666554333 22333332 13344        667888889999999998766322   


Q ss_pred             --hhhcC--CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         90 --LYQHG--LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        90 --~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                        +....  +...|++++|++|+..+.+|...|.|..-.++..       ..-....+.+......|..+.+.   ..+|
T Consensus       114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~-------~~~~~~~q~il~~ds~IVQlD~~---q~~L  183 (726)
T KOG3621|consen  114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSR-------QAFLSKSQEILSEDSEIVQLDYL---QSYL  183 (726)
T ss_pred             eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechh-------hhhccccceeeccCcceEEeecc---ccee
Confidence              11111  2358999999999999999999999988777661       00022233344445566666665   5566


Q ss_pred             EEeeecc
Q psy10942        166 VVASNEY  172 (537)
Q Consensus       166 ~~~~~~~  172 (537)
                      ++++-.+
T Consensus       184 LVStl~r  190 (726)
T KOG3621|consen  184 LVSTLTR  190 (726)
T ss_pred             hHhhhhh
Confidence            5555444

>KOG3617|consensus

Probab=97.86  E-value=0.00017  Score=70.56  Aligned_cols=306  Identities=9%  Similarity=0.018  Sum_probs=154.6

Q ss_pred             EEEEEeccccEEEEEe----CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942        100 VRIVRSSVKRMYAVVT----ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus       100 ~~~~~s~~~~~la~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      +-..|.|...++|+++    ..|.|.||--.+            ++.+... ..-.+.++||+| ..-.  .+.+-..  
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfadtG------------EPqr~Vt-~P~hatSLCWHp-e~~v--La~gwe~--   80 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFADTG------------EPQRDVT-YPVHATSLCWHP-EEFV--LAQGWEM--   80 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEecCC------------CCCcccc-cceehhhhccCh-HHHH--Hhhcccc--
Confidence            3446778888887776    357888885333            2222111 111267899994 4333  3333333  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                      |.+                 .+|..       ++.+..  ..     .|  ..+|..+   .||++|..++++..-|.+.
T Consensus        81 g~~-----------------~v~~~-------~~~e~htv~~-----th--~a~i~~l---~wS~~G~~l~t~d~~g~v~  126 (1416)
T KOG3617|consen   81 GVS-----------------DVQKT-------NTTETHTVVE-----TH--PAPIQGL---DWSHDGTVLMTLDNPGSVH  126 (1416)
T ss_pred             cee-----------------EEEec-------CCceeeeecc-----CC--CCCceeE---EecCCCCeEEEcCCCceeE
Confidence            447                 77776       555444  44     68  9999999   9999999999999999999


Q ss_pred             eccccccCCCcc-cccccccccceeeee----eC------CcceEEEEEeCCCeEE-EEECCCCceeeeeecccccccCC
Q psy10942        254 EELEKRKTYHFP-LFGIFVPEAEHGAFY----TG------GTVELLASGSLDKTVK-VWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       254 ~~iw~~~~~~~~-~~~~~~~~~~~~~~~----~~------~~v~~l~~~~~d~~i~-i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                        +|........ ....+.........+    -.      ..+...++.+.+.-+- .++.+....     ... ..|  
T Consensus       127 --lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a-----~rs-~~k--  196 (1416)
T KOG3617|consen  127 --LWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLA-----ERS-DEK--  196 (1416)
T ss_pred             --EEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchh-----hcc-ccc--
Confidence              9998742111 111111111000000    00      0001112222222111 111110000     000 001  


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------CCCEEEEEcCCCcEEEEE-CCCCeee----
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KGTQIVSTGADGLLKLWS-IKTSTCV----  388 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~~~l~~~~~d~~i~i~d-~~~~~~~----  388 (537)
                           .=.|+|..++.++.+|+|+-.|-.  ++.........        ....++....+-++.++- ..+|...    
T Consensus       197 -----sgv~~g~~F~~~~~~GtVyyvdq~--g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~  269 (1416)
T KOG3617|consen  197 -----SGVPKGTEFLFAGKSGTVYYVDQN--GRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCA  269 (1416)
T ss_pred             -----cCCCCCcEEEEEcCCceEEEEcCC--CcEEEEEEccchHHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhh
Confidence                 114688889999999998887755  33333332222        222222222222222221 1222110    


Q ss_pred             eeeccCC-cceEEEEE-------ecCCC--ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE-CCC------ceeeeEee
Q psy10942        389 STFDKHA-LKIWTLAI-------TKDEN--QIITGGVWFVNFSPLDRILISSSGDATIKLWC-LTD------YVCLKSLE  451 (537)
Q Consensus       389 ~~~~~~~-~~i~~~~~-------~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d-~~~------~~~~~~~~  451 (537)
                      ..+.+.. .+--.++.       .|+.+  ......+.+++++..+..|+.|...|.+.+|- ..+      ++....++
T Consensus       270 vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~  349 (1416)
T KOG3617|consen  270 VKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLN  349 (1416)
T ss_pred             hhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceEEec
Confidence            0011000 00001111       11111  11122699999999999999999999999994 322      12334444


Q ss_pred             c---CCcceEEEEEecCCCEEEEEeC
Q psy10942        452 G---HDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       452 ~---~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                      +   -.+.|+.+.|.|-.+.++.-+.
T Consensus       350 ~~~e~~g~I~~i~Wg~~k~~~avn~~  375 (1416)
T KOG3617|consen  350 GKRESLGKISLIRWGPIKSTAAVNTE  375 (1416)
T ss_pred             CchhhccceEEEEeccccchhhhhhh
Confidence            3   3467999999996655555443

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.85  E-value=0.0016  Score=61.22  Aligned_cols=274  Identities=12%  Similarity=0.026  Sum_probs=131.0

Q ss_pred             eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC--
Q psy10942        227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG--  304 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~--  304 (537)
                      .|..+   .|.++...|+.+...|.+.  +|+....+...... .++...+...      .  ....++.-.+-|+..  
T Consensus         3 ~v~~v---s~a~~t~Elav~~~~GeVv--~~k~~~n~~~~~~~-~~~~~~~~~~------~--~~~~~~~~~l~di~~r~   68 (395)
T PF08596_consen    3 SVTHV---SFAPETLELAVGLESGEVV--LFKFGKNQNYGNRE-QPPDLDYNFR------R--FSLNNSPGKLTDISDRA   68 (395)
T ss_dssp             -EEEE---EEETTTTEEEEEETTS-EE--EEEEEE-------------------------S----GGGSS-SEEE-GGG-
T ss_pred             eEEEE---EecCCCceEEEEccCCcEE--EEEcccCCCCCccC-CCcccCcccc------c--ccccCCCcceEEehhhC
Confidence            47788   8999999999999999999  98877643211000 0000000000      0  000111122333322  


Q ss_pred             -Cc--eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe--------------------
Q psy10942        305 -GL--KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG--------------------  361 (537)
Q Consensus       305 -~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------------------  361 (537)
                       ..  .-... ...+....++|++++.| |=.+++.|+.+|.+.|.|++ +...+..-..                    
T Consensus        69 ~~~~~~gf~P-~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~R-GPavI~~~~i~~~~~~~~~~~~vt~ieF~v  145 (395)
T PF08596_consen   69 PPSLKEGFLP-LTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLR-GPAVIYNENIRESFLSKSSSSYVTSIEFSV  145 (395)
T ss_dssp             -TT-SEEEEE-EEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETT-TTEEEEEEEGGG--T-SS----EEEEEEEE
T ss_pred             CcccccccCc-hhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECC-CCeEEeeccccccccccccccCeeEEEEEE
Confidence             11  11111 22234457899999998 45599999999999999998 4444433221                    


Q ss_pred             ---cCC---CCEEEEEcCCCcEEEEECCC---Cee----eeeeccCCcceEEEE-EecCCCceEEeeeeEEE-EcC--CC
Q psy10942        362 ---HKK---GTQIVSTGADGLLKLWSIKT---STC----VSTFDKHALKIWTLA-ITKDENQIITGGVWFVN-FSP--LD  424 (537)
Q Consensus       362 ---~~~---~~~l~~~~~d~~i~i~d~~~---~~~----~~~~~~~~~~i~~~~-~~~~~~~~~~~~i~~~~-~s~--~~  424 (537)
                         ..+   .-.+++|+..|.+.+|.+.-   +..    ......+..++..+. ++.+....+......+. .++  .-
T Consensus       146 m~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i  225 (395)
T PF08596_consen  146 MTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISI  225 (395)
T ss_dssp             EE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT---
T ss_pred             EecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCc
Confidence               112   24678888889999887642   111    111113334444333 22222111110000000 000  01


Q ss_pred             CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe-----cCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc---
Q psy10942        425 RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI-----NKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA---  496 (537)
Q Consensus       425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~---  496 (537)
                      +-++....+..++++...+.+.........-....+.+-     ..+..|++-..+|.++++.+..-+.+..+.-+.   
T Consensus       226 ~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d  305 (395)
T PF08596_consen  226 PGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLD  305 (395)
T ss_dssp             -EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---
T ss_pred             CcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccc
Confidence            123334456789999998877766555332233444552     356678888999999999999988887776532   


Q ss_pred             -cceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        497 -LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       497 -~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                       ..+           ...   .++++|+.++-.+..
T Consensus       306 ~~~~-----------~~s---sis~~Gdi~~~~gps  327 (395)
T PF08596_consen  306 SRRL-----------SSS---SISRNGDIFYWTGPS  327 (395)
T ss_dssp             HHHH-----------TT----EE-TTS-EEEE-SSS
T ss_pred             cccc-----------ccc---EECCCCCEEEEeCcc
Confidence             122           344   889999987765543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.82  E-value=0.00012  Score=69.09  Aligned_cols=71  Identities=23%  Similarity=0.211  Sum_probs=60.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      .+.+.+++|+...++.|+.||.|.+||...+...  +....-..+.++|+|+|.++++|+..|.+.+||+.-.
T Consensus       261 ~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  261 QVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            7889999999999999999999999998775333  2234456789999999999999999999999998644

>KOG1645|consensus

Probab=97.81  E-value=0.0021  Score=57.66  Aligned_cols=92  Identities=3%  Similarity=-0.083  Sum_probs=68.6

Q ss_pred             EEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEec
Q psy10942         28 LFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSS  106 (537)
Q Consensus        28 v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~  106 (537)
                      ++..+..+.+....++ +...|..+  .++|.       +.-++..++.+..|++.|+++...+.....+..+.+++|.-
T Consensus       175 v~~l~~~~fkssq~lp~~g~~Irdl--afSp~-------~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDl  245 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDL--AFSPF-------NEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDL  245 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhh--ccCcc-------ccceeeeeccCceEEEEecccceeeeheeccCCceeeeecc
Confidence            4444444444444333 34455666  55775       44478888889999999999999999998889999999986


Q ss_pred             cc-cEEEEEeCCceEEEEecccc
Q psy10942        107 VK-RMYAVVTADHNISLYRLNSE  128 (537)
Q Consensus       107 ~~-~~la~~~~d~~i~iwd~~~~  128 (537)
                      |. .+|..|-.+|.|.|||+...
T Consensus       246 de~h~IYaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  246 DERHVIYAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             CCcceeEEeccCceEEEEEccCC
Confidence            65 46778888999999999874

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.79  E-value=0.0011  Score=48.45  Aligned_cols=102  Identities=8%  Similarity=0.009  Sum_probs=73.2

Q ss_pred             eeeeeeeccCC--cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQIT--SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~--~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      |++|++.....  .+.|+.|++|..|++|+-+  +.+..+...+.+..+  +.+.        . ..++.+-++|+|-+|
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L--~~~~--------~-~~F~Y~l~NGTVGvY   68 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDKVTSL--CSLG--------G-GRFAYALANGTVGVY   68 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccceEEE--EEcC--------C-CEEEEEecCCEEEEE
Confidence            77888874222  2689999999999999743  667788877777777  5565        3 457777889999999


Q ss_pred             eccceehhhhcCCCcceEEEEEec---ccc-EEEEEeCCceEE
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSS---VKR-MYAVVTADHNIS  121 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~---~~~-~la~~~~d~~i~  121 (537)
                      +-  ...+.+.+....+.++++..   ||. .|++|-.+|.|-
T Consensus        69 ~~--~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   69 DR--SQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eC--cceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            74  45566666555677777643   232 588888888764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.76  E-value=0.0055  Score=57.65  Aligned_cols=102  Identities=11%  Similarity=0.080  Sum_probs=62.6

Q ss_pred             CCcceEEEe---------cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942         14 ITSEFSVHC---------GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET   84 (537)
Q Consensus        14 ~~~~~l~s~---------~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~   84 (537)
                      ||+++++..         +..+.+.++|+++++.....+....+...  .++|        +++.++... ++.|.++++
T Consensus         2 ~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~--~~sP--------~g~~~~~v~-~~nly~~~~   70 (353)
T PF00930_consen    2 PDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDA--KWSP--------DGKYIAFVR-DNNLYLRDL   70 (353)
T ss_dssp             TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEE--EE-S--------SSTEEEEEE-TTEEEEESS
T ss_pred             CCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccc--eeec--------CCCeeEEEe-cCceEEEEC
Confidence            777777763         23567999999998766654444555556  6788        445555554 567999988


Q ss_pred             cceehhhhcC-CC-----------------cceEEEEEeccccEEEEEeCC-ceEEEEecc
Q psy10942         85 SAVKELYQHG-LS-----------------SPLVRIVRSSVKRMYAVVTAD-HNISLYRLN  126 (537)
Q Consensus        85 ~~~~~~~~~~-~~-----------------~~v~~~~~s~~~~~la~~~~d-~~i~iwd~~  126 (537)
                      .+++..+.-. +.                 +.-.++-||||+++||....| ..|..+.+.
T Consensus        71 ~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~  131 (353)
T PF00930_consen   71 ATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP  131 (353)
T ss_dssp             TTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE
T ss_pred             CCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEee
Confidence            7664332211 11                 234678899999999887654 445555443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.74  E-value=0.048  Score=54.10  Aligned_cols=62  Identities=11%  Similarity=0.086  Sum_probs=43.1

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      |.|.-+|+.+++.+...+.......+. ..-.+.+++.++.||.++.+|.++|+.+..++...
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~  502 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGS  502 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCC
Confidence            467788888888877765322111221 22245577778889999999999999998886543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG4640|consensus

Probab=97.71  E-value=0.0002  Score=67.83  Aligned_cols=77  Identities=10%  Similarity=0.190  Sum_probs=70.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceE-EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVL-RCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      .+..+.|+|.-.++|.+..+|.|-+..++ .+.+.++.-|...++ +++|.|||+.||.|-.||+|++.|+.++..+..
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            67889999999999999999999999988 788999987777777 999999999999999999999999999988766

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.68  E-value=0.041  Score=49.95  Aligned_cols=102  Identities=10%  Similarity=-0.030  Sum_probs=70.0

Q ss_pred             eeeEEEEcCCCCEEEEEeCC-CcEEEEECCC--c----ee-eeEeecCCcceEEEEEecCCCEEEEEeCCC-cEEEEECC
Q psy10942        414 GVWFVNFSPLDRILISSSGD-ATIKLWCLTD--Y----VC-LKSLEGHDASVLRCHFINKGTQIVSTGADG-LLKLWSIK  484 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~d-g~i~i~d~~~--~----~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-~v~vwd~~  484 (537)
                      .-+.++||||++.|..+... +.|.-|++..  +    +. ...+....+..-.++...+|.+.+++..+| .|.+|+.+
T Consensus       164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd  243 (307)
T COG3386         164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD  243 (307)
T ss_pred             ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence            45679999999888877654 7788887752  1    11 122222345567788888998886555554 89999987


Q ss_pred             CCeeEEEecCCccceeccCCCCCCccccccceee-ecCCCEEEEEeC
Q psy10942        485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC-SRNSDCEYRGGW  530 (537)
Q Consensus       485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-s~~~~~l~s~~~  530 (537)
                       |+++..+..+...+           +++   +| .|+.+.|+..+.
T Consensus       244 -G~l~~~i~lP~~~~-----------t~~---~FgG~~~~~L~iTs~  275 (307)
T COG3386         244 -GKLLGEIKLPVKRP-----------TNP---AFGGPDLNTLYITSA  275 (307)
T ss_pred             -CcEEEEEECCCCCC-----------ccc---eEeCCCcCEEEEEec
Confidence             99999888776566           666   77 455666655443

>smart00320 WD40 WD40 repeats

Probab=97.66  E-value=0.00016  Score=42.35  Aligned_cols=39  Identities=36%  Similarity=0.611  Sum_probs=34.6

Q ss_pred             ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      +++...+..|...|.++.|.+++.++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            356677788899999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1645|consensus

Probab=97.62  E-value=0.0014  Score=58.64  Aligned_cols=86  Identities=14%  Similarity=0.018  Sum_probs=65.8

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      ++....+.+|...|..++|+|.+.+.+.+++-+..    |                 ++.|+       ++..+.  .. 
T Consensus       183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nk----i-----------------ki~dl-------et~~~vssy~-  233 (463)
T KOG1645|consen  183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNK----I-----------------KIMDL-------ETSCVVSSYI-  233 (463)
T ss_pred             cchhhcccccchhhhhhccCccccceeeeeccCce----E-----------------EEEec-------ccceeeehee-
Confidence            44455677788899999999777777888888777    8                 88898       776666  22 


Q ss_pred             cccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcc
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFP  265 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~  265 (537)
                          .   ...+.++   +|.-|. .++..|...|.|.  ++|++..+.+
T Consensus       234 ----a---~~~~wSC---~wDlde~h~IYaGl~nG~Vl--vyD~R~~~~~  271 (463)
T KOG1645|consen  234 ----A---YNQIWSC---CWDLDERHVIYAGLQNGMVL--VYDMRQPEGP  271 (463)
T ss_pred             ----c---cCCceee---eeccCCcceeEEeccCceEE--EEEccCCCch
Confidence                3   3678888   787665 5677788899999  9999986543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.62  E-value=0.002  Score=61.29  Aligned_cols=140  Identities=15%  Similarity=0.107  Sum_probs=80.7

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcE--EEEEccCCceeeEEEEecCCCCEEEEE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTV--KVWSTTGGLKLLNVLRGHKKGTQIVST  371 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i--~i~d~~~~~~~~~~~~~~~~~~~l~~~  371 (537)
                      ..+.++++.+++.....      ...+.-...+|+|||+.|+... .||..  ++.|+. ... ...+.....       
T Consensus       218 ~~i~~~~l~~g~~~~i~------~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~-~~~-~~~Lt~~~g-------  282 (425)
T COG0823         218 PRIYYLDLNTGKRPVIL------NFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD-GKN-LPRLTNGFG-------  282 (425)
T ss_pred             ceEEEEeccCCccceee------ccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCC-CCc-ceecccCCc-------
Confidence            46889999888753221      2233345678999998877654 45554  444554 221 111111100       


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-C--cEEEEECCCceeee
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-A--TIKLWCLTDYVCLK  448 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~i~i~d~~~~~~~~  448 (537)
                                                                .-..-.|+|||++++..+.. |  .|.+++...... .
T Consensus       283 ------------------------------------------i~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~  319 (425)
T COG0823         283 ------------------------------------------INTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-T  319 (425)
T ss_pred             ------------------------------------------cccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-e
Confidence                                                      11234588888888877643 3  466667766554 3


Q ss_pred             EeecCCcceEEEEEecCCCEEEEEeCC-Cc--EEEEECCCCeeEEEe
Q psy10942        449 SLEGHDASVLRCHFINKGTQIVSTGAD-GL--LKLWSIKTSTCVSTF  492 (537)
Q Consensus       449 ~~~~~~~~v~~~~~s~~~~~l~s~~~d-g~--v~vwd~~~~~~~~~~  492 (537)
                      .+....+.-..-.|+|||++|+..+.. |.  |.+.|+.++..++.+
T Consensus       320 riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l  366 (425)
T COG0823         320 RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL  366 (425)
T ss_pred             EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence            333232222377899999999987753 44  666776666543333

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.59  E-value=0.077  Score=50.86  Aligned_cols=180  Identities=14%  Similarity=0.069  Sum_probs=91.7

Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee------eEEE---Ee-----
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL------LNVL---RG-----  361 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~------~~~~---~~-----  361 (537)
                      .|++|+...... ..+   .+.  .+.|.++.|+.+. .|++...||.++++|+. +...      +...   ..     
T Consensus        62 ~I~iys~sG~ll-~~i---~w~--~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~  133 (410)
T PF04841_consen   62 SIQIYSSSGKLL-SSI---PWD--SGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAI  133 (410)
T ss_pred             EEEEECCCCCEe-EEE---EEC--CCCEEEEEECCCC-eEEEEEcCCEEEEEeCC-CceeechhhhccccCccccccccc
Confidence            488998876643 221   122  2789999999865 45566789999999996 3320      0000   00     


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      ...+.-++.-..++.+.+..--... ....+.............+...     .+  ..++.+....+....++.+.+.+
T Consensus       134 ~~~~~GivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~-----~i--~~l~~~~~~~i~~~~g~~i~~i~  206 (410)
T PF04841_consen  134 WFYKNGIVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWT-----VI--PLLSSDRVVEILLANGETIYIID  206 (410)
T ss_pred             ccCCCCEEEECCCCeEEEEeCccccchhhccccCCCcccccccccccc-----cc--eEeecCcceEEEEecCCEEEEEE
Confidence            0001112333334443333211111 1111110000000000000000     01  33445555555555556666454


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      ....+.   +. ..+++..|+.||++++||.-..+|.+.+...+-.+.+..+..
T Consensus       207 ~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~  256 (410)
T PF04841_consen  207 ENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDT  256 (410)
T ss_pred             cccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeec
Confidence            333211   22 246799999999999999999999999988765555555543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.58  E-value=0.043  Score=47.68  Aligned_cols=185  Identities=15%  Similarity=0.137  Sum_probs=113.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCee
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      ..-...+.|..++.++-+.+.-|  .|+.+|+. +++........+.          +......-.++...+||..+.+.
T Consensus        44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~-tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~  122 (264)
T PF05096_consen   44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLE-TGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKK  122 (264)
T ss_dssp             T-EEEEEEEEETTEEEEEECSTTEEEEEEEETT-TSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred             cccCccEEecCCCEEEEeCCCCCcEEEEEEECC-CCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceE
Confidence            34567888877888888877666  68899998 6666666555543          33444555688999999999988


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEE
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHF  462 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~  462 (537)
                      +.++.-..                  .-+.++  .|++.|+.......++++|..+.+....+....     ..++.+.|
T Consensus       123 ~~~~~y~~------------------EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~  182 (264)
T PF05096_consen  123 IGTFPYPG------------------EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEY  182 (264)
T ss_dssp             EEEEE-SS------------------S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEE
T ss_pred             EEEEecCC------------------cceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEE
Confidence            88775442                  234444  456677777777899999998877776665332     23566777


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc--ce--eccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL--KI--RNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~--~i--~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      . +|...|=.=....|...|..+|+.+..+....-  .+  .........-.+.+   |+.|..+.|...|
T Consensus       183 i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGI---Ayd~~~~~l~vTG  249 (264)
T PF05096_consen  183 I-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGI---AYDPETDRLFVTG  249 (264)
T ss_dssp             E-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEE---EEETTTTEEEEEE
T ss_pred             E-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeE---eEeCCCCEEEEEe
Confidence            6 666666665667889999999998887642110  00  00000001111455   9998887776554

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.56  E-value=0.0049  Score=58.69  Aligned_cols=99  Identities=20%  Similarity=0.072  Sum_probs=62.8

Q ss_pred             eEEEEcCCCCEEEEEe-CCC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC-CCc--EEEEECCCCeeE
Q psy10942        416 WFVNFSPLDRILISSS-GDA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA-DGL--LKLWSIKTSTCV  489 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~--v~vwd~~~~~~~  489 (537)
                      ...+|+|||+.|+... .||  .|+++|+...+. ..+....+.-..-.|+|||+.|+-.+. .|.  |.+++.+.+.. 
T Consensus       241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~-~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-  318 (425)
T COG0823         241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNL-PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-  318 (425)
T ss_pred             CCccCCCCCCEEEEEECCCCCccEEEEcCCCCcc-eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-
Confidence            3456889988777554 455  466678877663 335433444447789999999987765 343  66677655544 


Q ss_pred             EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      ..+......-           ..-   .|||||++|+..+.
T Consensus       319 ~riT~~~~~~-----------~~p---~~SpdG~~i~~~~~  345 (425)
T COG0823         319 TRLTFSGGGN-----------SNP---VWSPDGDKIVFESS  345 (425)
T ss_pred             eEeeccCCCC-----------cCc---cCCCCCCEEEEEec
Confidence            3333332222           333   79999999987764

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.50  E-value=0.16  Score=52.35  Aligned_cols=118  Identities=10%  Similarity=0.094  Sum_probs=70.8

Q ss_pred             eccCCcceEEEecCcceEEEEEcCccceeeeeccccccce------e-eeEeecC--ccc------cccCCcEEEEEeCc
Q psy10942         11 IPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLET------C-AVFHLSD--ETE------SKSGGKTFVLAGGE   75 (537)
Q Consensus        11 ~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~------~-~~~~~~~--~~~------~~~~~~~~~~~~~~   75 (537)
                      .|.--+..++.++.++.|.-.|.++|+++=++........      | ++.+...  ...      ........++.++.
T Consensus       189 TPlvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~  268 (764)
T TIGR03074       189 TPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTS  268 (764)
T ss_pred             CCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecC
Confidence            3333466788888889999999999998887764333221      1 1122211  000      00012246777888


Q ss_pred             cceEEeeeccceehhhhcCCCcceE-------------EEEEec--cccEEEEEeC----------CceEEEEecccc
Q psy10942         76 KSLLHYYETSAVKELYQHGLSSPLV-------------RIVRSS--VKRMYAVVTA----------DHNISLYRLNSE  128 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~~~~~v~-------------~~~~s~--~~~~la~~~~----------d~~i~iwd~~~~  128 (537)
                      |+.|.-.|.++|+.+..+..++.|.             .+.-+|  .+..+++++.          +|.|+-+|..++
T Consensus       269 Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TG  346 (764)
T TIGR03074       269 DARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTG  346 (764)
T ss_pred             CCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCC
Confidence            9999999999999987765443321             111112  1334555542          578999999993

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.46  E-value=0.089  Score=48.51  Aligned_cols=123  Identities=11%  Similarity=0.014  Sum_probs=58.0

Q ss_pred             EcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc--eEEeeeccceehhhhcCCC-cceEEEEEeccc
Q psy10942         32 DLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS--LLHYYETSAVKELYQHGLS-SPLVRIVRSSVK  108 (537)
Q Consensus        32 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~  108 (537)
                      |..+|..+.++........-  .+.- +.+...++.++|+.+..+|  .+.+.|+.+++..+--.+. +.......+|++
T Consensus        16 D~~TG~~VtrLT~~~~~~h~--~YF~-~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~   92 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHR--LYFY-QNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDD   92 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE-----TT-S--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTS
T ss_pred             CCCCCceEEEecCCCCcccc--eeec-CCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCC
Confidence            67788777766533332221  1111 1122333556666655454  4777788888776555543 233356678988


Q ss_pred             cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942        109 RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus       109 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      +.++-......|+-.|+.+           ++....+.-..+.+-...|..+.+...+++
T Consensus        93 ~~~~Yv~~~~~l~~vdL~T-----------~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g  141 (386)
T PF14583_consen   93 RALYYVKNGRSLRRVDLDT-----------LEERVVYEVPDDWKGYGTWVANSDCTKLVG  141 (386)
T ss_dssp             SEEEEEETTTEEEEEETTT-------------EEEEEE--TTEEEEEEEEE-TTSSEEEE
T ss_pred             CeEEEEECCCeEEEEECCc-----------CcEEEEEECCcccccccceeeCCCccEEEE
Confidence            8887666667888899998           455455555555554455643333333333

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.45  E-value=0.042  Score=52.63  Aligned_cols=60  Identities=23%  Similarity=0.230  Sum_probs=41.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec--CCCCEEEEEcCCCcEEEE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH--KKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~l~~~~~d~~i~i~  380 (537)
                      .+++..|++||+++++|.-..+|.+.+.+.. -.+....+...  .....++-++.|.-+..|
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssD-f~~~~~e~~~~~~~~p~~~~WCG~dav~l~~  277 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSD-FSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW  277 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECc-ccceeEEeecCcCCCCcEEEEECCCcEEEEe
Confidence            4679999999999999999999999888766 33444444433  234455556665555555

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG1897|consensus

Probab=97.44  E-value=0.18  Score=51.48  Aligned_cols=68  Identities=12%  Similarity=0.094  Sum_probs=51.1

Q ss_pred             CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC--CCCeeEEEe
Q psy10942        423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI--KTSTCVSTF  492 (537)
Q Consensus       423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~--~~~~~~~~~  492 (537)
                      +|+++|.  -+..|++|++.+.+.++.-..|..++..+...-.+..+++|..-+++.+-..  ..|.....-
T Consensus       839 ngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evA  908 (1096)
T KOG1897|consen  839 NGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVA  908 (1096)
T ss_pred             CCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEee
Confidence            4556554  3468999999998777777778889999999999999999998887766544  344344433

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.42  E-value=0.019  Score=58.41  Aligned_cols=133  Identities=9%  Similarity=0.035  Sum_probs=86.5

Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcc-eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-eeee
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALK-IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-VCLK  448 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~  448 (537)
                      ......++-.|+..|+.+..+..+... +..+  .|+.+.        ....+  ..-+.|-.+..+..||.+-. ..+.
T Consensus       500 ~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~--~p~~K~--------aqlt~--e~tflGls~n~lfriDpR~~~~k~v  567 (794)
T PF08553_consen  500 PNNPNKLYKMDLERGKVVEEWKVHDDIPVVDI--APDSKF--------AQLTN--EQTFLGLSDNSLFRIDPRLSGNKLV  567 (794)
T ss_pred             CCCCCceEEEecCCCcEEEEeecCCCcceeEe--cccccc--------cccCC--CceEEEECCCceEEeccCCCCCcee
Confidence            345688999999999999999877643 2222  222110        00112  23455667788999998752 2221


Q ss_pred             Eeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE-EEecCCccceeccCCCCCCccccccceeeecCCC
Q psy10942        449 SLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD  523 (537)
Q Consensus       449 ~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~  523 (537)
                      .-..    ......|++-+.+| +||+|+.+|.||+||- .|+.- ..+.+-..+|           .+|   ..+.||+
T Consensus       568 ~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI-----------~~i---Dvt~DGk  631 (794)
T PF08553_consen  568 DSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPI-----------IGI---DVTADGK  631 (794)
T ss_pred             eccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCe-----------eEE---EecCCCc
Confidence            1111    23346777777666 7999999999999994 44332 3445656788           889   9999999


Q ss_pred             EEEEEeCC
Q psy10942        524 CEYRGGWS  531 (537)
Q Consensus       524 ~l~s~~~d  531 (537)
                      +|+..+..
T Consensus       632 wilaTc~t  639 (794)
T PF08553_consen  632 WILATCKT  639 (794)
T ss_pred             EEEEeecc
Confidence            99876643

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG3617|consensus

Probab=97.40  E-value=0.00022  Score=69.78  Aligned_cols=105  Identities=10%  Similarity=0.092  Sum_probs=84.2

Q ss_pred             EEEEcCCCCEEEEEeC----CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        417 FVNFSPLDRILISSSG----DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       417 ~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      -..|+|...++++++-    .|.|.||- .+|++..... ..-.+++++|+|..-.|+.+=.-|.+.+|...+.+.-...
T Consensus        20 i~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~   97 (1416)
T KOG3617|consen   20 ISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVV   97 (1416)
T ss_pred             ccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeec
Confidence            3567888888887763    57888884 4555544333 2234678999999888899988999999999888777777


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..|..+|           ..+   .||++|..|.|+..-|.|.+|
T Consensus        98 ~th~a~i-----------~~l---~wS~~G~~l~t~d~~g~v~lw  128 (1416)
T KOG3617|consen   98 ETHPAPI-----------QGL---DWSHDGTVLMTLDNPGSVHLW  128 (1416)
T ss_pred             cCCCCCc-----------eeE---EecCCCCeEEEcCCCceeEEE
Confidence            8899999           899   999999999999999999988

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.39  E-value=0.055  Score=51.02  Aligned_cols=93  Identities=12%  Similarity=0.185  Sum_probs=59.0

Q ss_pred             eeeeccCCcceEEEecCcceEEE---EEcCc-c--ceee------eecc--ccccceeeeEeecCcc---ccccCCcEEE
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFT---WDLSS-R--KQLR------SYPA--YESLETCAVFHLSDET---ESKSGGKTFV   70 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~i---wd~~~-~--~~~~------~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~   70 (537)
                      +..+  +++++|+.+..+..+.+   |+.+. +  ....      .+..  .|.|+++.+  +|-..   .....+...+
T Consensus         7 isls--~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~c--lpl~s~~~s~~~~dw~~I   82 (415)
T PF14655_consen    7 ISLS--PDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILC--LPLSSQKRSTGGPDWTCI   82 (415)
T ss_pred             EEec--CCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEE--EEeecccccCCCCCcEEE
Confidence            4556  89999999988776666   74421 1  1111      2222  256777733  44211   1123356899


Q ss_pred             EEeCccceEEeeeccceehhhhcC-CCcceEEEEEe
Q psy10942         71 LAGGEKSLLHYYETSAVKELYQHG-LSSPLVRIVRS  105 (537)
Q Consensus        71 ~~~~~~~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s  105 (537)
                      ++|..+|.|++|.. +|.++.... ++++|..+.+-
T Consensus        83 ~VG~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   83 AVGTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             EEEecccEEEEEec-cchHHHHHhcCccceEEEEec
Confidence            99999999999996 566655544 56799999884

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.34  E-value=0.004  Score=54.22  Aligned_cols=111  Identities=14%  Similarity=0.142  Sum_probs=71.7

Q ss_pred             eeeeeeeeccCC-cceEEEecCcceEEEEEcCccceeeeecc--ccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          4 CVTCFDVIPQIT-SEFSVHCGRDKVLFTWDLSSRKQLRSYPA--YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         4 ~V~~~~~~~~~~-~~~l~s~~~~g~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .++.|+|.  |+ +.++++..+.+.|...+. +|+.++.++.  ..-.+.+  .+..        ++.++++.-.++.|.
T Consensus        23 e~SGLTy~--pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI--~y~g--------~~~~vl~~Er~~~L~   89 (248)
T PF06977_consen   23 ELSGLTYN--PDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGI--TYLG--------NGRYVLSEERDQRLY   89 (248)
T ss_dssp             -EEEEEEE--TTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEE--EE-S--------TTEEEEEETTTTEEE
T ss_pred             CccccEEc--CCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeE--EEEC--------CCEEEEEEcCCCcEE
Confidence            48999999  65 456666788898988886 5888888773  3455666  5565        668888777789999


Q ss_pred             eeeccceeh------hh--hcC----CCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         81 YYETSAVKE------LY--QHG----LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        81 ~wd~~~~~~------~~--~~~----~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      +.++.....      ..  .+.    .+..+-.++|+|.++.|.++-...-..+|.+..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~  148 (248)
T PF06977_consen   90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNG  148 (248)
T ss_dssp             EEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred             EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcc
Confidence            998843221      11  111    224689999999988887777766677777764

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1008|consensus

Probab=97.33  E-value=9.3e-05  Score=70.02  Aligned_cols=207  Identities=15%  Similarity=0.149  Sum_probs=122.3

Q ss_pred             cceEEEEEecc--ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         97 SPLVRIVRSSV--KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      ..+.+++.+-+  ...+++|..+|.|-+-.+....         ..-.....+|....++++|++-|.+.|+++-....+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~h---------dSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrn  127 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPH---------DSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRN  127 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcc---------cccceecccccccccccccccccHHHHHhhhhhhcc
Confidence            45777776544  3468899999999998876621         112335567778899999997777888776554444


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc-CCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG-RDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~-h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                      ...+                 .|||+       .+.-.. .....+.+ -  .....++   +|-.+.+++.+|...+.+
T Consensus       128 ds~~-----------------~Iwdi-------~s~ltvPke~~~fs~~~--l~gqns~---cwlrd~klvlaGm~sr~~  178 (783)
T KOG1008|consen  128 DSSL-----------------KIWDI-------NSLLTVPKESPLFSSST--LDGQNSV---CWLRDTKLVLAGMTSRSV  178 (783)
T ss_pred             cCCc-----------------cceec-------ccccCCCcccccccccc--ccCcccc---ccccCcchhhcccccchh
Confidence            4456                 99999       544221 11001112 2  3445577   788888999999999999


Q ss_pred             eeccccccCCCcccccccccccceeeeeeC-----CcceEEEEEeCCCeEEEEEC-CCCceeeeeecccccccCCCeEEE
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTG-----GTVELLASGSLDKTVKVWST-TGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      .  +++++........     +.+ ..+.+     ...+++++-. ||.|.+||. ..-+.+..............+..+
T Consensus       179 ~--ifdlRqs~~~~~s-----vnT-k~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~  249 (783)
T KOG1008|consen  179 H--IFDLRQSLDSVSS-----VNT-KYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFAL  249 (783)
T ss_pred             h--hhhhhhhhhhhhh-----hhh-hhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeE
Confidence            9  9988742110000     000 01111     1114555544 999999993 332222111111111222358999


Q ss_pred             EEcCCCC-EEEEEe-CCCcEEEEEcc
Q psy10942        327 TVSPNDK-LLASGS-LDKTVKVWSTT  350 (537)
Q Consensus       327 ~~s~~~~-~l~~~~-~d~~i~i~d~~  350 (537)
                      +|.|... .+++.. ..++|+++|+.
T Consensus       250 aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  250 AYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             EeccCCcchhhhhccCcceEEEeccc
Confidence            9999432 344444 45788999876

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.27  E-value=0.033  Score=40.95  Aligned_cols=97  Identities=13%  Similarity=0.095  Sum_probs=64.5

Q ss_pred             EcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccc
Q psy10942        420 FSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  498 (537)
Q Consensus       420 ~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~  498 (537)
                      |..|| +.|++|+.|..|++|+-.  +.+.++.. .+.|++++-... ..++.+-.+|+|-+|+-  .+.+...+.... 
T Consensus        10 ~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~-   82 (111)
T PF14783_consen   10 FDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKSKNQ-   82 (111)
T ss_pred             cCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeeccCCC-
Confidence            33343 689999999999999854  56677764 456788877666 56888999999999985  334444443332 


Q ss_pred             eeccCCCCCCccccccceeeecC--C-CEEEEEeCCCCEEe
Q psy10942        499 IRNSDSENDHKGFGLPRQLCSRN--S-DCEYRGGWSPQVVV  536 (537)
Q Consensus       499 i~~~~~~~~~~~~~~~~~~~s~~--~-~~l~s~~~dg~i~v  536 (537)
                      +           .++.  .+..+  | .-|++|-.+|.|-+
T Consensus        83 ~-----------~~~~--~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   83 V-----------TSMA--FYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             e-----------EEEE--EEcCCCCCceEEEEEecCCeEEe
Confidence            3           4441  22222  2 26888888888743

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.24  E-value=0.022  Score=56.90  Aligned_cols=80  Identities=8%  Similarity=-0.010  Sum_probs=47.3

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEE---EECCCCeeEEE-----ec-CCccceeccCC
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL---WSIKTSTCVST-----FD-KHALKIRNSDS  504 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~v---wd~~~~~~~~~-----~~-~~~~~i~~~~~  504 (537)
                      +.+.+.++..++...   ...+.|..+.|||||..++... ++.|++   -....|+ ...     +. .-...+     
T Consensus       430 gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~-----  499 (591)
T PRK13616        430 GQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTA-----  499 (591)
T ss_pred             ceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEeecccCCcc-----
Confidence            445555665544433   2346799999999999998776 467776   4444554 111     11 111123     


Q ss_pred             CCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        505 ENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       505 ~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                            .++   .|..++.++ ++..++.
T Consensus       500 ------~~l---~W~~~~~L~-V~~~~~~  518 (591)
T PRK13616        500 ------VSL---DWRTGDSLV-VGRSDPE  518 (591)
T ss_pred             ------ccc---eEecCCEEE-EEecCCC
Confidence                  566   999999865 4444443

>KOG2079|consensus

Probab=97.22  E-value=0.00099  Score=67.33  Aligned_cols=99  Identities=12%  Similarity=0.144  Sum_probs=75.5

Q ss_pred             CCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceecc
Q psy10942        424 DRILISSSGDATIKLWCLTDY-VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNS  502 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~  502 (537)
                      +..++.|+..|.+...|.... .+...-..-.++|++++|+.+|+.++.|-.+|.|.+||..+++.++.+..|..+.   
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~---  175 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPV---  175 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCcc---
Confidence            446888888888888887652 1122222345789999999999999999999999999999999999998877766   


Q ss_pred             CCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        503 DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       503 ~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                              +++-.+.+..++..+.++..-|.
T Consensus       176 --------t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  176 --------TGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             --------ceEEEEEEeCCCcEEEEccCCCc
Confidence                    55533356666777778777775

>smart00320 WD40 WD40 repeats

Probab=97.18  E-value=0.00095  Score=38.77  Aligned_cols=38  Identities=8%  Similarity=0.072  Sum_probs=32.9

Q ss_pred             CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++++..+..|...+           .++   .|+++++++++++.|+.+++|
T Consensus         2 ~~~~~~~~~~~~~i-----------~~~---~~~~~~~~~~~~~~d~~~~~~   39 (40)
T smart00320        2 GELLKTLKGHTGPV-----------TSV---AFSPDGKYLASASDDGTIKLW   39 (40)
T ss_pred             cEEEEEEEecCCce-----------eEE---EECCCCCEEEEecCCCeEEEc
Confidence            35566777788888           888   999999999999999999998

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.16  E-value=0.21  Score=46.46  Aligned_cols=170  Identities=14%  Similarity=0.068  Sum_probs=91.4

Q ss_pred             CeEEEEECCCC-ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC---------
Q psy10942        295 KTVKVWSTTGG-LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---------  364 (537)
Q Consensus       295 ~~i~i~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---------  364 (537)
                      |.|.++++... ....++.........++|.+++-- +++ |+++. ++.|.+|++.........-..+..         
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~  138 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF  138 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE
T ss_pred             cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc
Confidence            88999999884 111111111223457889999876 444 44443 488999999844413333332221         


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-  443 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-  443 (537)
                      +++++.+.....+.++..+.         .......++-+....     .++++.|-++++.++.++.+|.+.++.... 
T Consensus       139 ~~~I~vgD~~~sv~~~~~~~---------~~~~l~~va~d~~~~-----~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~  204 (321)
T PF03178_consen  139 KNYILVGDAMKSVSLLRYDE---------ENNKLILVARDYQPR-----WVTAAEFLVDEDTIIVGDKDGNLFVLRYNPE  204 (321)
T ss_dssp             TTEEEEEESSSSEEEEEEET---------TTE-EEEEEEESS-B-----EEEEEEEE-SSSEEEEEETTSEEEEEEE-SS
T ss_pred             ccEEEEEEcccCEEEEEEEc---------cCCEEEEEEecCCCc-----cEEEEEEecCCcEEEEEcCCCeEEEEEECCC
Confidence            45666666666665553332         222222222222211     677888876667999999999999997752 


Q ss_pred             ------c--eeeeEeecC-CcceEEE---EEec--CC------CEEEEEeCCCcEEEE
Q psy10942        444 ------Y--VCLKSLEGH-DASVLRC---HFIN--KG------TQIVSTGADGLLKLW  481 (537)
Q Consensus       444 ------~--~~~~~~~~~-~~~v~~~---~~s~--~~------~~l~s~~~dg~v~vw  481 (537)
                            +  +......-| ...|+++   .+.|  .+      ..++.++.+|.|.+.
T Consensus       205 ~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  205 IPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             -SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             CcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence                  1  222222222 3457776   4444  12      247788889988744

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1008|consensus

Probab=97.15  E-value=0.00012  Score=69.26  Aligned_cols=175  Identities=16%  Similarity=0.220  Sum_probs=107.3

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEe----CCCcEEEEEccCCce-eeEE--
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGS----LDKTVKVWSTTGGLK-LLNV--  358 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----~d~~i~i~d~~~~~~-~~~~--  358 (537)
                      .++.|..+|.|-+-.........   .....+|..+.++++|++ |.+.||.|-    .|..+.|||+..... +...  
T Consensus        72 IlavG~atG~I~l~s~r~~hdSs---~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~  148 (783)
T KOG1008|consen   72 ILAVGSATGNISLLSVRHPHDSS---AEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPL  148 (783)
T ss_pred             hhhhccccCceEEeecCCccccc---ceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccc
Confidence            67788889999998876554321   234567788899999998 556677663    367899999984311 1111  


Q ss_pred             -----------EEecCCCCEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCC
Q psy10942        359 -----------LRGHKKGTQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDR  425 (537)
Q Consensus       359 -----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~  425 (537)
                                 +....+...+.+|.....+.++|++... ....+.                   +..+..+..+| .+.
T Consensus       149 fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn-------------------Tk~vqG~tVdp~~~n  209 (783)
T KOG1008|consen  149 FSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN-------------------TKYVQGITVDPFSPN  209 (783)
T ss_pred             cccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh-------------------hhhcccceecCCCCC
Confidence                       1111234556666666677777776321 111111                   11455566777 667


Q ss_pred             EEEEEeCCCcEEEEE-CCC-ceeeeEeecCC----cceEEEEEecCC-CEEEEEeCC-CcEEEEECC
Q psy10942        426 ILISSSGDATIKLWC-LTD-YVCLKSLEGHD----ASVLRCHFINKG-TQIVSTGAD-GLLKLWSIK  484 (537)
Q Consensus       426 ~l~~~~~dg~i~i~d-~~~-~~~~~~~~~~~----~~v~~~~~s~~~-~~l~s~~~d-g~v~vwd~~  484 (537)
                      |+++-. ||.|.+|| ..+ ..++..+....    ..+..++|+|.. ..+++...| ++|+.+++.
T Consensus       210 Y~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  210 YFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             ceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            777655 89999999 333 22333333222    248899999943 356666554 789999875

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.15  E-value=0.25  Score=47.08  Aligned_cols=171  Identities=13%  Similarity=0.081  Sum_probs=107.0

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEccCCceeeEEEEecC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL---DKTVKVWSTTGGLKLLNVLRGHK  363 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~  363 (537)
                      ..+....++.|.+.|..+........    .+  .....++++|+++.+.++..   ++.+.+.|.. ..+.......  
T Consensus        88 vyv~~~~~~~v~vid~~~~~~~~~~~----vG--~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~-t~~~~~~~~v--  158 (381)
T COG3391          88 VYVTTGDSNTVSVIDTATNTVLGSIP----VG--LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA-TNKVTATIPV--  158 (381)
T ss_pred             EEEecCCCCeEEEEcCcccceeeEee----ec--cCCceEEECCCCCEEEEEecccCCceEEEEeCC-CCeEEEEEec--
Confidence            44555556889999976665433221    11  14567889999887777655   4556666655 3333332111  


Q ss_pred             CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECC
Q psy10942        364 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLT  442 (537)
Q Consensus       364 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~  442 (537)
                                                    ...                 + ..++++|+|+.+.... .++.|.+.|..
T Consensus       159 ------------------------------G~~-----------------P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~  190 (381)
T COG3391         159 ------------------------------GNT-----------------P-TGVAVDPDGNKVYVTNSDDNTVSVIDTS  190 (381)
T ss_pred             ------------------------------CCC-----------------c-ceEEECCCCCeEEEEecCCCeEEEEeCC
Confidence                                          000                 3 5678889988666665 67899999977


Q ss_pred             Cceeee-E----eecCCcceEEEEEecCCCEEEEEeCC---CcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccc
Q psy10942        443 DYVCLK-S----LEGHDASVLRCHFINKGTQIVSTGAD---GLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       443 ~~~~~~-~----~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      ...... .    .... ..-..+.++|++.++......   +.+...|..++..... +.......           ..+
T Consensus       191 ~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~-----------~~v  258 (381)
T COG3391         191 GNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAP-----------RGV  258 (381)
T ss_pred             CcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCC-----------Cce
Confidence            655443 1    2212 234678999999977666544   5899999988877654 22111122           556


Q ss_pred             cceeeecCCCEEEEEe
Q psy10942        514 PRQLCSRNSDCEYRGG  529 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~  529 (537)
                         ..+|+|+.+.+..
T Consensus       259 ---~~~p~g~~~yv~~  271 (381)
T COG3391         259 ---AVDPAGKAAYVAN  271 (381)
T ss_pred             ---eECCCCCEEEEEe
Confidence               8999999988873

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.14  E-value=0.17  Score=45.85  Aligned_cols=57  Identities=23%  Similarity=0.225  Sum_probs=40.7

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      +.++.|..+| +.+++........+.      .+...|..+...|+-+.|++-+ |+.++++++.
T Consensus         8 ~~L~vGt~~G-l~~~~~~~~~~~~~i------~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~   64 (275)
T PF00780_consen    8 DRLLVGTEDG-LYVYDLSDPSKPTRI------LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLD   64 (275)
T ss_pred             CEEEEEECCC-EEEEEecCCccceeE------eecceEEEEEEecccCEEEEEc-CCccEEEEch
Confidence            4788888888 899998333322211      2233499999999888877765 5999999976

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2444|consensus

Probab=97.12  E-value=0.00064  Score=56.26  Aligned_cols=135  Identities=12%  Similarity=0.067  Sum_probs=86.6

Q ss_pred             EEEEeCCCcEEEEEccCCceeeEE-------EEecCCCCEEEEEcCCCcEEEEECCCCeee-eeeccCCcceEEEEEecC
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNV-------LRGHKKGTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIWTLAITKD  406 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~  406 (537)
                      +..-+.||.+.-++++......+.       +.....+..++.|+.+|.|.+|.....-.. ..+......         
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~---------  103 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEES---------  103 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhccccc---------
Confidence            444566777777776632111111       222334677889999999999987621111 111111111         


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-cceEEEEEecCCCEEEEE--eCCCcEEEEEC
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-ASVLRCHFINKGTQIVST--GADGLLKLWSI  483 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~--~~dg~v~vwd~  483 (537)
                             ....+.--.++.+..++..||.|+.|++.-.+.+.....|. .++.....+..+++++.+  |.|..++.|++
T Consensus       104 -------i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  104 -------IDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             -------ceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcch
Confidence                   11112222345678899999999999999888888777787 667777777778888888  88888999988


Q ss_pred             CC
Q psy10942        484 KT  485 (537)
Q Consensus       484 ~~  485 (537)
                      ..
T Consensus       177 e~  178 (238)
T KOG2444|consen  177 EK  178 (238)
T ss_pred             hh
Confidence            54

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.11  E-value=0.04  Score=49.95  Aligned_cols=135  Identities=17%  Similarity=0.179  Sum_probs=81.3

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh-
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ-   92 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~-   92 (537)
                      ..++.|+.|.++| |.+++.+.......+....++..+  ...|+        -+.+++-+ |+.|.++++........ 
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql--~vl~~--------~~~llvLs-d~~l~~~~L~~l~~~~~~   72 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQL--SVLPE--------LNLLLVLS-DGQLYVYDLDSLEPVSTS   72 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEE--EEecc--------cCEEEEEc-CCccEEEEchhhcccccc
Confidence            5678899999999 899998444334444334447777  55773        33444444 58999999887655441 


Q ss_pred             --------------cCCCcceEEEE---EeccccEEEEEeCCceEEEEecccccCccccccccc-ceeEEeecchhhhhh
Q psy10942         93 --------------HGLSSPLVRIV---RSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL-KFRKQFVGFSDEILD  154 (537)
Q Consensus        93 --------------~~~~~~v~~~~---~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~  154 (537)
                                    +.....+..++   -.....+|+++.. ..|.+|.+.....       .. ...+.+.- .+.+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~k-k~i~i~~~~~~~~-------~f~~~~ke~~l-p~~~~~  143 (275)
T PF00780_consen   73 APLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVK-KKILIYEWNDPRN-------SFSKLLKEISL-PDPPSS  143 (275)
T ss_pred             ccccccccccccccccccCCeeEEeeccccccceEEEEEEC-CEEEEEEEECCcc-------cccceeEEEEc-CCCcEE
Confidence                          22223455555   1233445655554 5899988876211       02 34445443 356888


Q ss_pred             hhcccCCCccEEEeeecc
Q psy10942        155 IALLGEEDSHIVVASNEY  172 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~  172 (537)
                      ++|.   ++.++++..++
T Consensus       144 i~~~---~~~i~v~~~~~  158 (275)
T PF00780_consen  144 IAFL---GNKICVGTSKG  158 (275)
T ss_pred             EEEe---CCEEEEEeCCc
Confidence            9998   56677776444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.08  E-value=0.25  Score=45.92  Aligned_cols=170  Identities=11%  Similarity=0.135  Sum_probs=92.5

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC----CCEEEEEeC----------CCcEEEEEccCC----cee-
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN----DKLLASGSL----------DKTVKVWSTTGG----LKL-  355 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~----------d~~i~i~d~~~~----~~~-  355 (537)
                      ..|++.|..+.+..... .-....+-..+..+.+..+    ..++++|+.          .|.|.++++...    .+. 
T Consensus         2 s~i~l~d~~~~~~~~~~-~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~   80 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSF-ELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK   80 (321)
T ss_dssp             -EEEEEETTTSSEEEEE-EEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred             cEEEEEeCCCCeEEEEE-ECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence            35778887776654332 1111122222334444432    467777653          288999999842    111 


Q ss_pred             -eEEEEecCC-------CCEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCE
Q psy10942        356 -LNVLRGHKK-------GTQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRI  426 (537)
Q Consensus       356 -~~~~~~~~~-------~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~  426 (537)
                       +........       +..++ ++.++.+.+|++...+ ....-..+. +.               .+.++..  .+++
T Consensus        81 ~i~~~~~~g~V~ai~~~~~~lv-~~~g~~l~v~~l~~~~~l~~~~~~~~-~~---------------~i~sl~~--~~~~  141 (321)
T PF03178_consen   81 LIHSTEVKGPVTAICSFNGRLV-VAVGNKLYVYDLDNSKTLLKKAFYDS-PF---------------YITSLSV--FKNY  141 (321)
T ss_dssp             EEEEEEESS-EEEEEEETTEEE-EEETTEEEEEEEETTSSEEEEEEE-B-SS---------------SEEEEEE--ETTE
T ss_pred             EEEEEeecCcceEhhhhCCEEE-EeecCEEEEEEccCcccchhhheecc-eE---------------EEEEEec--cccE
Confidence             111111111       33433 3335889999988777 222211111 00               2333333  3568


Q ss_pred             EEEEeCCCcEEEEECCC-ceeeeEee--cCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        427 LISSSGDATIKLWCLTD-YVCLKSLE--GHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       427 l~~~~~dg~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      +++|+....+.++.... ...+..+.  .....++++.|-++++.++.+..+|.+.++...
T Consensus       142 I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  142 ILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            99999888888875443 22233332  234558899998776799999999999999875

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG4640|consensus

Probab=97.05  E-value=0.0038  Score=59.57  Aligned_cols=94  Identities=17%  Similarity=0.199  Sum_probs=69.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      ...|.-+.|+|.-.++|.+..+|.+.+..++ .                        -|+|++..         +..   
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~------------------------qRlwtip~---------p~~---   62 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-W------------------------QRLWTIPI---------PGE---   62 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-c------------------------ceeEeccC---------CCC---
Confidence            3457788899988888888888888887776 1                        23444431         111   


Q ss_pred             EEEEecCCCceEEeeee-EEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee-cCCcceEEEEEec
Q psy10942        400 TLAITKDENQIITGGVW-FVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE-GHDASVLRCHFIN  464 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~  464 (537)
                                    .++ +++|.|||+.||+|-.||+|++.|..++..+.... .-...|.++.|++
T Consensus        63 --------------~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   63 --------------NVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             --------------ccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence                          344 89999999999999999999999999987776632 2345677888863

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.04  E-value=0.014  Score=59.22  Aligned_cols=128  Identities=13%  Similarity=0.052  Sum_probs=83.4

Q ss_pred             CCCcEEEEEccCCceeeEEEEecCC----------------CCEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEE
Q psy10942        340 LDKTVKVWSTTGGLKLLNVLRGHKK----------------GTQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLA  402 (537)
Q Consensus       340 ~d~~i~i~d~~~~~~~~~~~~~~~~----------------~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~  402 (537)
                      ....++-.|+. .++.+.....+.+                ....+.|-.++.+..||.+-.. .+..-..+       .
T Consensus       502 ~~~~ly~mDLe-~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k-------~  573 (794)
T PF08553_consen  502 NPNKLYKMDLE-RGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK-------Q  573 (794)
T ss_pred             CCCceEEEecC-CCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc-------c
Confidence            44667777887 6666665555443                3456777788889999988532 11100000       0


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      +...      ....|++-+.+| +||+|+.+|.|++||--..+....+.+-..+|..|..+.||++|++.+. ..+.+++
T Consensus       574 Y~~~------~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~  645 (794)
T PF08553_consen  574 YSSK------NNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLID  645 (794)
T ss_pred             cccC------CCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEE
Confidence            0000      145566666666 6899999999999995433333455677889999999999999887764 4566776


Q ss_pred             C
Q psy10942        483 I  483 (537)
Q Consensus       483 ~  483 (537)
                      .
T Consensus       646 t  646 (794)
T PF08553_consen  646 T  646 (794)
T ss_pred             E
Confidence            4

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.99  E-value=0.02  Score=49.77  Aligned_cols=150  Identities=10%  Similarity=0.112  Sum_probs=100.5

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      +..|+++.|+  |+.+.|++....+.-.+|=..+|+.++++|  .....+.+  .++.        +++++++--.++.+
T Consensus        85 ~~nvS~LTyn--p~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~I--eyig--------~n~fvi~dER~~~l  152 (316)
T COG3204          85 TANVSSLTYN--PDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETI--EYIG--------GNQFVIVDERDRAL  152 (316)
T ss_pred             cccccceeeC--CCcceEEEecCCCceEEEEecCCceEEEecccccCChhHe--EEec--------CCEEEEEehhcceE
Confidence            3458899999  888888888888878888788999999998  33444555  4555        66788887778888


Q ss_pred             EeeeccceehhhhcCC-----------CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc
Q psy10942         80 HYYETSAVKELYQHGL-----------SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      .+..+..+..+.....           +...-.+||.|....|.++-+.+-+.||.+......        -.......+
T Consensus       153 ~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~--------l~~~~~~~~  224 (316)
T COG3204         153 YLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSS--------LSVHASLDP  224 (316)
T ss_pred             EEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcc--------cccccccCc
Confidence            8887765533222211           346789999999999998888777888877653110        001111111


Q ss_pred             -------hhhhhhhhcccCCCccEEEeeec
Q psy10942        149 -------SDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus       149 -------~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                             -..|.++.|.+..+..|+....+
T Consensus       225 ~~~~~~f~~DvSgl~~~~~~~~LLVLS~ES  254 (316)
T COG3204         225 TADRDLFVLDVSGLEFNAITNSLLVLSDES  254 (316)
T ss_pred             ccccceEeeccccceecCCCCcEEEEecCC
Confidence                   22478888986666655554433

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.93  E-value=0.039  Score=52.94  Aligned_cols=134  Identities=15%  Similarity=0.124  Sum_probs=74.8

Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                      ...+.+..+|.+..+++ ..+|...++.........                      .|.....+|.+.++ +|+-..+
T Consensus        33 ~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~----------------------~G~g~~~vw~~~n~-yAv~~~~   88 (443)
T PF04053_consen   33 IYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA----------------------FGSGLSFVWSSRNR-YAVLESS   88 (443)
T ss_dssp             S--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE----------------------EEE-SEEEE-TSSE-EEEE-TT
T ss_pred             cCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc----------------------cCceeEEEEecCcc-EEEEECC
Confidence            33566777788888877 556667776633332211                      22556788888555 5666668


Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      +.|.++.--+.+....++.. ..+..+-.   |.+|...+.+ .|.+||.++++.++.+....  |           ..+
T Consensus        89 ~~I~I~kn~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~--v-----------k~V  150 (443)
T PF04053_consen   89 STIKIYKNFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSA--V-----------KYV  150 (443)
T ss_dssp             S-EEEEETTEE-TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--------------EEE
T ss_pred             CeEEEEEcCccccceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCC--C-----------cEE
Confidence            88999743233332344321 23444433   7777777655 79999999999999987543  5           666


Q ss_pred             cceeeecCCCEEEEEeCCC
Q psy10942        514 PRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~~dg  532 (537)
                         .|+++|++++-.+.+.
T Consensus       151 ---~Ws~~g~~val~t~~~  166 (443)
T PF04053_consen  151 ---IWSDDGELVALVTKDS  166 (443)
T ss_dssp             ---EE-TTSSEEEEE-S-S
T ss_pred             ---EEECCCCEEEEEeCCe
Confidence               9999999999887664

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.77  E-value=0.43  Score=49.37  Aligned_cols=204  Identities=11%  Similarity=0.071  Sum_probs=116.9

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccC----CCeEEEEEc----------------CCCCEEEEEeCCCcEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE----KDINCVTVS----------------PNDKLLASGSLDKTVK  345 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s----------------~~~~~l~~~~~d~~i~  345 (537)
                      ..++.++.++.|.-.|..+++.+.+.... .....    ...+.+++.                ..+..++.++.|+.+.
T Consensus       195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~-~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       195 DTLYLCTPHNKVIALDAATGKEKWKFDPK-LKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEEEcCC-CCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            56777888899999999999876654211 11100    011223322                1345788888899999


Q ss_pred             EEEccCCceeeEEEEe------------c----------C--CCCEEEEEcC----------CCcEEEEECCCCeeeeee
Q psy10942        346 VWSTTGGLKLLNVLRG------------H----------K--KGTQIVSTGA----------DGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       346 i~d~~~~~~~~~~~~~------------~----------~--~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~  391 (537)
                      -.|.. +++..-.+..            .          +  .+..++.++.          +|.|+-+|.++|+.+-.+
T Consensus       274 ALDA~-TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDAD-TGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECC-CCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            99988 4444432211            0          0  0455666642          688999999999998877


Q ss_pred             ccCCcceEEEEEecCCCceEEe--ee-eEEEEcCCCCEEEEEe------------------CCCcEEEEECCCceeeeEe
Q psy10942        392 DKHALKIWTLAITKDENQIITG--GV-WFVNFSPLDRILISSS------------------GDATIKLWCLTDYVCLKSL  450 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~--~i-~~~~~s~~~~~l~~~~------------------~dg~i~i~d~~~~~~~~~~  450 (537)
                      ..........  .+.+.....+  .+ ..++++++..++..+.                  ..+.|.-.|.++|+....+
T Consensus       353 ~~g~p~~~~~--~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~  430 (764)
T TIGR03074       353 DPGNPDPTAP--PAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVF  430 (764)
T ss_pred             ecCCCCcccC--CCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEe
Confidence            5321100000  0111111101  11 2344454444433322                  2355677788899988887


Q ss_pred             ecCCcceE---------EEEEec-CCC---EEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        451 EGHDASVL---------RCHFIN-KGT---QIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       451 ~~~~~~v~---------~~~~s~-~~~---~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      +.....+.         -+.+.. +|+   .++.++.+|.+++.|.++|+.+...+
T Consensus       431 Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~  486 (764)
T TIGR03074       431 QTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE  486 (764)
T ss_pred             cccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence            65221111         122322 553   78899999999999999999887653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.70  E-value=0.0042  Score=37.83  Aligned_cols=32  Identities=13%  Similarity=0.290  Sum_probs=28.8

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC  446 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~  446 (537)
                      .|..++|+|...+||.++.+|.|.++.+ +++.
T Consensus        13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   13 RVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             cEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            7889999999999999999999999998 5544

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.66  E-value=0.063  Score=46.69  Aligned_cols=109  Identities=11%  Similarity=0.050  Sum_probs=73.6

Q ss_pred             eeeeeeccCCcceEEEecCcc--eEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          6 TCFDVIPQITSEFSVHCGRDK--VLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         6 ~~~~~~~~~~~~~l~s~~~~g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      ..+.|.  .++.++-+.|.-|  .|+.+|+++|+.....+.....-+=++....        + ++..-.-.++...+||
T Consensus        48 QGL~~~--~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~--------d-~l~qLTWk~~~~f~yd  116 (264)
T PF05096_consen   48 QGLEFL--DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG--------D-KLYQLTWKEGTGFVYD  116 (264)
T ss_dssp             EEEEEE--ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET--------T-EEEEEESSSSEEEEEE
T ss_pred             ccEEec--CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC--------C-EEEEEEecCCeEEEEc
Confidence            456775  5778888887765  6999999999988877655544333334454        4 3444445588999999


Q ss_pred             ccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         84 TSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        84 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      ..+.+.+.++...+.=..++  .|++.|+.......|.++|..+
T Consensus       117 ~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~  158 (264)
T PF05096_consen  117 PNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPET  158 (264)
T ss_dssp             TTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT
T ss_pred             cccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcc
Confidence            99988888887665555554  6777777776667899999887

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.65  E-value=0.0072  Score=36.84  Aligned_cols=35  Identities=11%  Similarity=0.092  Sum_probs=30.6

Q ss_pred             CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        454 DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      ...|..++|+|...+||.++.+|.|.++.+ +++.+
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri   45 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI   45 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence            456999999999999999999999999998 66543

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.58  E-value=0.46  Score=41.69  Aligned_cols=198  Identities=14%  Similarity=0.126  Sum_probs=113.1

Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec-----------CCCCEEEEEcCCCcEEEEECCC
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH-----------KKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----------~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                      ..+-...+.++.|+|+.+.|++......-.++ +...++.++.+.-.           .++.++++--.++.+.++.+..
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVE-lt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~  159 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVE-LTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA  159 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEE-EecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence            34445569999999999998887766544443 44367777766533           2356666666778888877765


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee---eeEeecC-------C
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC---LKSLEGH-------D  454 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~-------~  454 (537)
                      ......+....   ..+.-.+..+    .+...++|+|..+.|..+-+-.-+.||.......   +.....+       -
T Consensus       160 ~t~~~~~~~~~---i~L~~~~k~N----~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~  232 (316)
T COG3204         160 DTTVISAKVQK---IPLGTTNKKN----KGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFV  232 (316)
T ss_pred             CccEEeccceE---EeccccCCCC----cCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEe
Confidence            53332222110   0011111111    1678899999999999888888788887653221   1111111       1


Q ss_pred             cceEEEEEec-CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        455 ASVLRCHFIN-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       455 ~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      ..|.++.|.+ .+.+|+-+.+++.+.-.|. .|+.+..+.-+.+.-  .-..+-+++-.+   +..++|.+-++
T Consensus       233 ~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~lsL~~g~~--gL~~dipqaEGi---amDd~g~lYIv  300 (316)
T COG3204         233 LDVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIELLSLTKGNH--GLSSDIPQAEGI---AMDDDGNLYIV  300 (316)
T ss_pred             eccccceecCCCCcEEEEecCCceEEEEec-CCCeeeeEEeccCCC--CCcccCCCccee---EECCCCCEEEE
Confidence            3467788887 4556666667777777776 555555443322210  001111233455   77777764443

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.52  E-value=0.25  Score=47.04  Aligned_cols=107  Identities=8%  Similarity=0.066  Sum_probs=73.1

Q ss_pred             eeeEEEEcCCCCEEEEEeC---CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCeeE
Q psy10942        414 GVWFVNFSPLDRILISSSG---DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTCV  489 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~  489 (537)
                      ....++++|+++.+.++..   ++.+.+.|..+.+.+.....-..+ ..++++|+|..++.+. .++.|.+.|.......
T Consensus       117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence            3456888999887777765   689999999998888886544445 8899999999776655 6889999997665554


Q ss_pred             EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                      . -.... .+     .....+..+   .++|+|..+++....
T Consensus       196 ~-~~~~~-~~-----~~~~~P~~i---~v~~~g~~~yV~~~~  227 (381)
T COG3391         196 R-GSVGS-LV-----GVGTGPAGI---AVDPDGNRVYVANDG  227 (381)
T ss_pred             c-ccccc-cc-----ccCCCCceE---EECCCCCEEEEEecc
Confidence            3 11000 00     001111456   899999988776443

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.51  E-value=0.78  Score=43.52  Aligned_cols=79  Identities=16%  Similarity=0.334  Sum_probs=58.6

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec---C-----------------CCEE-EEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN---K-----------------GTQI-VST  472 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~---~-----------------~~~l-~s~  472 (537)
                      .+.+++.+|++++.|+.+.-|.|.++|+.++..++.++|..+.=  +.|-.   .                 ..+| +-+
T Consensus       309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAq--c~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya  386 (415)
T PF14655_consen  309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQ--CGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA  386 (415)
T ss_pred             eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccce--EEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence            47889999999999998888999999999998888888765431  22211   1                 1123 345


Q ss_pred             eCCCcEEEEECCCCeeEEEecC
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      -.-|.|-||.+++|..+..+..
T Consensus       387 prRg~lEvW~~~~g~Rv~a~~v  408 (415)
T PF14655_consen  387 PRRGILEVWSMRQGPRVAAFNV  408 (415)
T ss_pred             ccCCeEEEEecCCCCEEEEEEe
Confidence            5678999999999988877653

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.50  E-value=0.17  Score=43.88  Aligned_cols=234  Identities=9%  Similarity=0.080  Sum_probs=121.0

Q ss_pred             ceehhhhcCCCcceEEEEEeccccE-EEEEeCCce-EEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRM-YAVVTADHN-ISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS  163 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  163 (537)
                      .|+.+.....+..-..|+|+|.-.. ++.+-.-|+ ..++|..+.......   ....-+.+-+|.      +|+ +++.
T Consensus        57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~---~s~~~RHfyGHG------vfs-~dG~  126 (366)
T COG3490          57 AGKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTL---VSQEGRHFYGHG------VFS-PDGR  126 (366)
T ss_pred             CCceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEE---ecccCceeeccc------ccC-CCCc
Confidence            4566666666677888999987654 666666565 568898873111000   011112334454      488 7787


Q ss_pred             cEEEeeeccc-cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCe
Q psy10942        164 HIVVASNEYL-NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDL  242 (537)
Q Consensus       164 ~l~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~  242 (537)
                      +|...-++.+ +.|.|                 -+||.       ...-..  ..++..|  .-.-..+   .+.+||+.
T Consensus       127 ~LYATEndfd~~rGVi-----------------GvYd~-------r~~fqr--vgE~~t~--GiGpHev---~lm~DGrt  175 (366)
T COG3490         127 LLYATENDFDPNRGVI-----------------GVYDA-------REGFQR--VGEFSTH--GIGPHEV---TLMADGRT  175 (366)
T ss_pred             EEEeecCCCCCCCceE-----------------EEEec-------ccccce--ecccccC--CcCccee---EEecCCcE
Confidence            7766555544 33455                 67777       322222  1122266  5556677   78899998


Q ss_pred             eeeccCCCcceeccc-cccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccc--cc
Q psy10942        243 FPRQSMEPSTLEELE-KRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--GH  319 (537)
Q Consensus       243 l~~~~~d~~i~~~iw-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~--~~  319 (537)
                      ++.+.  |-|.  .- +...  .                      .+-.-+...++.+.|..++..+.+.   .+.  .+
T Consensus       176 lvvan--GGIe--thpdfgR--~----------------------~lNldsMePSlvlld~atG~liekh---~Lp~~l~  224 (366)
T COG3490         176 LVVAN--GGIE--THPDFGR--T----------------------ELNLDSMEPSLVLLDAATGNLIEKH---TLPASLR  224 (366)
T ss_pred             EEEeC--Ccee--cccccCc--c----------------------ccchhhcCccEEEEeccccchhhhc---cCchhhh
Confidence            88654  3343  21 1110  0                      0001112234555565555443221   222  45


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCc----------------EEEEEccCC-----ceeeEEEEecCCCCEE-EEEcCCCcE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKT----------------VKVWSTTGG-----LKLLNVLRGHKKGTQI-VSTGADGLL  377 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~----------------i~i~d~~~~-----~~~~~~~~~~~~~~~l-~~~~~d~~i  377 (537)
                      ...|..++..+||..++-+-..|.                +...++...     ...+..+..+.+...+ ++.-..+..
T Consensus       225 ~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~  304 (366)
T COG3490         225 QLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRA  304 (366)
T ss_pred             hcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeE
Confidence            567888888888876665433321                111111100     0112223333333344 444455677


Q ss_pred             EEEECCCCeeeeee
Q psy10942        378 KLWSIKTSTCVSTF  391 (537)
Q Consensus       378 ~i~d~~~~~~~~~~  391 (537)
                      .+||..++..+...
T Consensus       305 vi~da~tG~vv~~a  318 (366)
T COG3490         305 VIWDAATGAVVSEA  318 (366)
T ss_pred             EEEEcCCCcEEecc
Confidence            88999999876554

>KOG2079|consensus

Probab=96.47  E-value=0.01  Score=60.44  Aligned_cols=68  Identities=22%  Similarity=0.472  Sum_probs=55.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE---ecCCCEEEEEeCCCcEEEEEC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF---INKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      ++++++|+.+|++++.|-.+|.|.+||...++.++.+..|..+.+++-+   ..++..+.++..-|.  +|++
T Consensus       132 ~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  132 PVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             cceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            8999999999999999999999999999999999998888777665544   345566777777675  5654

>KOG2395|consensus

Probab=96.42  E-value=0.059  Score=50.74  Aligned_cols=137  Identities=12%  Similarity=0.040  Sum_probs=89.3

Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc-e
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-V  445 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~  445 (537)
                      .+..+.....++-.|+..|+.+.....+.. |.-+.+.|+.+.-        .+.+.+  -+.|-.|..|.-||.+-. +
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~--------Ql~~e~--TlvGLs~n~vfriDpRv~~~  416 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFA--------QLTSEQ--TLVGLSDNSVFRIDPRVQGK  416 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchh--------cccccc--cEEeecCCceEEecccccCc
Confidence            444556667888889999999988887765 5555555554311        111222  234556788888987632 2


Q ss_pred             -eeeEeecCC----cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE-EEecCCccceeccCCCCCCccccccceeee
Q psy10942        446 -CLKSLEGHD----ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIRNSDSENDHKGFGLPRQLCS  519 (537)
Q Consensus       446 -~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  519 (537)
                       .+...++|.    ....|.+-..+| ++|+||.+|.||+||- .+..- ..+++-..+|           ..+   ..+
T Consensus       417 ~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I-----------~hV---dvt  480 (644)
T KOG2395|consen  417 NKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAI-----------KHV---DVT  480 (644)
T ss_pred             ceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCce-----------eeE---Eee
Confidence             333334442    234455544454 8999999999999996 44433 4556677788           888   999


Q ss_pred             cCCCEEEEEeC
Q psy10942        520 RNSDCEYRGGW  530 (537)
Q Consensus       520 ~~~~~l~s~~~  530 (537)
                      .||++|+..+.
T Consensus       481 adGKwil~Tc~  491 (644)
T KOG2395|consen  481 ADGKWILATCK  491 (644)
T ss_pred             ccCcEEEEecc
Confidence            99999876654

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.25  E-value=0.067  Score=53.56  Aligned_cols=105  Identities=14%  Similarity=0.036  Sum_probs=59.3

Q ss_pred             eeeEEEEcCCCCEEEEEe------CCC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC-CcEEEEECC
Q psy10942        414 GVWFVNFSPLDRILISSS------GDA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-GLLKLWSIK  484 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~------~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g~v~vwd~~  484 (537)
                      .+.+.+++|||+.++...      .|.  .|.+++.. +.......+  ...+.-.|+|||+.|++.... ..+++.+-.
T Consensus       351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~  427 (591)
T PRK13616        351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDP  427 (591)
T ss_pred             CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccC
Confidence            456677888887776655      233  45555642 222222232  237889999999888877543 223333322


Q ss_pred             CCeeEEEec--------CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        485 TSTCVSTFD--------KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       485 ~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ....+..+.        .....|           ..+   .|||||..|+... +|.|.|
T Consensus       428 ~~gql~~~~vd~ge~~~~~~g~I-----------ssl---~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        428 ATGQLARTPVDASAVASRVPGPI-----------SEL---QLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             CCceEEEEeccCchhhhccCCCc-----------CeE---EECCCCCEEEEEE-CCEEEE
Confidence            111222111        112345           777   9999999988765 455543

>KOG2444|consensus

Probab=96.24  E-value=0.019  Score=47.94  Aligned_cols=100  Identities=9%  Similarity=0.028  Sum_probs=66.9

Q ss_pred             CCEEEEEeCCCcEEEEECCCc-eeeeEeecCCcceEEEE-EecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc-ccee
Q psy10942        424 DRILISSSGDATIKLWCLTDY-VCLKSLEGHDASVLRCH-FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA-LKIR  500 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~-~~i~  500 (537)
                      +.-+++|+.+|.|++|+.... .....+..-...|.++. --.++.+..+++.||.||.|++.-++.+...-.|. .++ 
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~-  148 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG-  148 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc-
Confidence            456899999999999987631 11111111122232222 22345688899999999999999888887776676 444 


Q ss_pred             ccCCCCCCccccccceeeecCCCEEEEE--eCCCCEEeC
Q psy10942        501 NSDSENDHKGFGLPRQLCSRNSDCEYRG--GWSPQVVVY  537 (537)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~s~~~~~l~s~--~~dg~i~vW  537 (537)
                                ..+   ..+..++.|+.+  |.|..++.|
T Consensus       149 ----------e~~---ivv~sd~~i~~a~~S~d~~~k~W  174 (238)
T KOG2444|consen  149 ----------EEL---IVVGSDEFLKIADTSHDRVLKKW  174 (238)
T ss_pred             ----------cee---EEecCCceEEeeccccchhhhhc
Confidence                      444   566777788877  778877777

>KOG4499|consensus

Probab=96.23  E-value=0.61  Score=39.36  Aligned_cols=132  Identities=11%  Similarity=0.110  Sum_probs=77.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCC---------CcEEEEEccCCceeeEE-------EEecCC-CCEEEEEcCCCcEEEEE-
Q psy10942        320 EKDINCVTVSPNDKLLASGSLD---------KTVKVWSTTGGLKLLNV-------LRGHKK-GTQIVSTGADGLLKLWS-  381 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~-------~~~~~~-~~~l~~~~~d~~i~i~d-  381 (537)
                      ....+.-..+|+|++++-.-.|         |.++.|-....-+.+..       +....+ ..+.+.-+.+-+|.-|| 
T Consensus       108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dy  187 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDY  187 (310)
T ss_pred             hcccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeec
Confidence            4456677789999984432222         34455544322222111       111111 23445566677776676 


Q ss_pred             -CCCCee-----eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc
Q psy10942        382 -IKTSTC-----VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA  455 (537)
Q Consensus       382 -~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  455 (537)
                       ..+|..     +..++...   ..-..-|||          ++...+|.+.++.-..++|...|..+|+.+.+++-...
T Consensus       188 d~~tG~~snr~~i~dlrk~~---~~e~~~PDG----------m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~  254 (310)
T KOG4499|consen  188 DCPTGDLSNRKVIFDLRKSQ---PFESLEPDG----------MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTP  254 (310)
T ss_pred             CCCcccccCcceeEEeccCC---CcCCCCCCc----------ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCC
Confidence             555542     22221110   000112332          45566888888888889999999999999999998888


Q ss_pred             ceEEEEEec
Q psy10942        456 SVLRCHFIN  464 (537)
Q Consensus       456 ~v~~~~~s~  464 (537)
                      .|++++|-.
T Consensus       255 qitsccFgG  263 (310)
T KOG4499|consen  255 QITSCCFGG  263 (310)
T ss_pred             ceEEEEecC
Confidence            999999964

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=96.22  E-value=0.25  Score=37.81  Aligned_cols=114  Identities=11%  Similarity=0.136  Sum_probs=78.5

Q ss_pred             eeeeeeccCCcceEEEecCcceEEEEEcCc--------cceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc
Q psy10942          6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSS--------RKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS   77 (537)
Q Consensus         6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (537)
                      +.-.|.  .....|+.+...|.|.|.+...        ...+..+...+.+.+++.-.+.+     +.+...|+.++ ..
T Consensus         2 aiGkfD--G~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~-----~~~~D~LliGt-~t   73 (136)
T PF14781_consen    2 AIGKFD--GVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKP-----DDGRDCLLIGT-QT   73 (136)
T ss_pred             eEEEeC--CCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCC-----CCCcCEEEEec-cc
Confidence            444555  5556788888899999998763        34566777788888874433311     12445677777 55


Q ss_pred             eEEeeeccceehhhhcCCCcceEEEEEec---cccEEEEEeCCceEEEEeccc
Q psy10942         78 LLHYYETSAVKELYQHGLSSPLVRIVRSS---VKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~~~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~  127 (537)
                      .|-.||.+....+.....++.|.++.+-.   ...-|+..+.+-.|.=||.+.
T Consensus        74 ~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G  126 (136)
T PF14781_consen   74 SLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEG  126 (136)
T ss_pred             eEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCC
Confidence            59999999999888888888899888832   122355555557787788776

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.22  E-value=0.87  Score=41.49  Aligned_cols=70  Identities=11%  Similarity=0.048  Sum_probs=45.6

Q ss_pred             eeeEEEEcCCCCEEEEEeC-----------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC-CCcEEEE
Q psy10942        414 GVWFVNFSPLDRILISSSG-----------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA-DGLLKLW  481 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~vw  481 (537)
                      ..+.....|+|.+.+....           -|.++-+|. .+.....+..+-..-+.++||||++.|+.+.. .+.|.-|
T Consensus       112 r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~  190 (307)
T COG3386         112 RPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY  190 (307)
T ss_pred             CCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence            4556667777766554433           133444443 45666666665666789999999988887765 4778888


Q ss_pred             ECC
Q psy10942        482 SIK  484 (537)
Q Consensus       482 d~~  484 (537)
                      ++.
T Consensus       191 ~~d  193 (307)
T COG3386         191 DLD  193 (307)
T ss_pred             ecC
Confidence            775

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.18  E-value=0.72  Score=40.97  Aligned_cols=105  Identities=8%  Similarity=0.003  Sum_probs=62.0

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEE-CCCceee-eEeecC--CcceEEEEEecCCCEEEEEe---CCCcEEEEECC--
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWC-LTDYVCL-KSLEGH--DASVLRCHFINKGTQIVSTG---ADGLLKLWSIK--  484 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d-~~~~~~~-~~~~~~--~~~v~~~~~s~~~~~l~s~~---~dg~v~vwd~~--  484 (537)
                      .+....|++++...+....+...+++. ...+... ..+...  ...|..+.+||||..+|...   .++.|.+=-+.  
T Consensus        67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~  146 (253)
T PF10647_consen   67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD  146 (253)
T ss_pred             ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC
Confidence            455567888877777777666666663 2332221 112111  12799999999999988766   34666665442  


Q ss_pred             -CC------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942        485 -TS------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       485 -~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                       .+      ..+.........+           .++   +|.+++.+++.+...+
T Consensus       147 ~~g~~~~l~~~~~~~~~~~~~v-----------~~v---~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  147 GDGVPRRLTGPRRVAPPLLSDV-----------TDV---AWSDDSTLVVLGRSAG  187 (253)
T ss_pred             CCCCcceeccceEecccccCcc-----------eee---eecCCCEEEEEeCCCC
Confidence             22      1111111222344           677   9999999887765433

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG4441|consensus

Probab=95.99  E-value=0.72  Score=46.35  Aligned_cols=177  Identities=15%  Similarity=0.155  Sum_probs=91.0

Q ss_pred             eEEEEEeCC------CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCCc
Q psy10942        286 ELLASGSLD------KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGGL  353 (537)
Q Consensus       286 ~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~~  353 (537)
                      ..++.|+.+      ..+..||..++....   ...+. ....-.+++.. ++...++|+.|      .++..||.. ..
T Consensus       286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~---~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~-~~  359 (571)
T KOG4441|consen  286 KLVAVGGYNRQGQSLRSVECYDPKTNEWSS---LAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPR-TN  359 (571)
T ss_pred             eEEEECCCCCCCcccceeEEecCCcCcEee---cCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCC-CC
Confidence            456666666      468888888874322   11122 22223344444 56788888888      346677776 33


Q ss_pred             eeeEEEEec----------CCCCEEEEEcCCCc-----EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942        354 KLLNVLRGH----------KKGTQIVSTGADGL-----LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV  418 (537)
Q Consensus       354 ~~~~~~~~~----------~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~  418 (537)
                      +-...-...          -.|...++|+.||.     +..||..+.+-...-.-.. .                .-..-
T Consensus       360 ~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~-~----------------r~~~g  422 (571)
T KOG4441|consen  360 QWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT-R----------------RSGHG  422 (571)
T ss_pred             ceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCc-c----------------eeeeE
Confidence            222111111          12677788888863     5566666543221111100 0                11111


Q ss_pred             EEcCCCCEEEEEeCCC------cEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCCCc-----EEEEECCC
Q psy10942        419 NFSPLDRILISSSGDA------TIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGADGL-----LKLWSIKT  485 (537)
Q Consensus       419 ~~s~~~~~l~~~~~dg------~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-----v~vwd~~~  485 (537)
                      ...-+|++.++|+.++      ++..||..+.+-  +..+..-..... ++ .-++.+.+.||.|+.     |..||..+
T Consensus       423 v~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~  500 (571)
T KOG4441|consen  423 VAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGGFDGTSALSSVERYDPET  500 (571)
T ss_pred             EEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECCccCCCccceEEEEcCCC
Confidence            2223567777777554      567788766432  222221111111 22 236677888887763     66777766


Q ss_pred             Ce
Q psy10942        486 ST  487 (537)
Q Consensus       486 ~~  487 (537)
                      .+
T Consensus       501 ~~  502 (571)
T KOG4441|consen  501 NQ  502 (571)
T ss_pred             Cc
Confidence            54

>PHA02713 hypothetical protein; Provisional

Probab=95.83  E-value=0.35  Score=48.60  Aligned_cols=72  Identities=11%  Similarity=0.105  Sum_probs=41.7

Q ss_pred             CCCEEEEEeCC------CcEEEEECCC---ceeeeEeecCCcceEEEEEecCCCEEEEEeCCC--cEEEEECCCCeeEEE
Q psy10942        423 LDRILISSSGD------ATIKLWCLTD---YVCLKSLEGHDASVLRCHFINKGTQIVSTGADG--LLKLWSIKTSTCVST  491 (537)
Q Consensus       423 ~~~~l~~~~~d------g~i~i~d~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~  491 (537)
                      ++++.+.|+.+      ..+..||..+   +..+..+.........+.+  ++++.++|+.|+  .+-.||..+.+-...
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~  540 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI  540 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence            45666666653      2467888775   3444444432222222222  678888999888  677888777654433


Q ss_pred             ecCCc
Q psy10942        492 FDKHA  496 (537)
Q Consensus       492 ~~~~~  496 (537)
                      ...|.
T Consensus       541 ~~~~~  545 (557)
T PHA02713        541 CHQHS  545 (557)
T ss_pred             hhhcC
Confidence            33443

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=95.77  E-value=1.9  Score=41.09  Aligned_cols=139  Identities=15%  Similarity=0.145  Sum_probs=81.5

Q ss_pred             CcceEEEecCcceEEEEEcCccc-----eeeeeccccccceeeeEe-ecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRK-----QLRSYPAYESLETCAVFH-LSDETESKSGGKTFVLAGGEKSLLHYYETSAVK   88 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~   88 (537)
                      +...|+.|+..|.++|++.....     ++-+.....||..+.+-. .+.      .+...|++-. ...|.+|.+....
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~------~~~~~LaVLh-P~kl~vY~v~~~~  108 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSG------SEDLQLAVLH-PRKLSVYSVSLVD  108 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCC------CCcceEEEec-CCEEEEEEEEecC
Confidence            55799999999999999985543     333455667777764432 221      1334566655 5568888873211


Q ss_pred             ------------hhhhcCCCcceEEEEEec----c-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         89 ------------ELYQHGLSSPLVRIVRSS----V-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        89 ------------~~~~~~~~~~v~~~~~s~----~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                                  .+.+.........+..-|    . ..+|++=+-||.+.+++-+.           ....+.+.+ .--
T Consensus       109 g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~-----------~~f~~~lp~-~ll  176 (418)
T PF14727_consen  109 GTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES-----------FAFSRFLPD-FLL  176 (418)
T ss_pred             CCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc-----------EEEEEEcCC-CCC
Confidence                        111111112333333322    2 45788889999999999887           444445544 222


Q ss_pred             hhhhhcccCCCccEEEeeeccc
Q psy10942        152 ILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      ...++|. +..+.+++++.+..
T Consensus       177 PgPl~Y~-~~tDsfvt~sss~~  197 (418)
T PF14727_consen  177 PGPLCYC-PRTDSFVTASSSWT  197 (418)
T ss_pred             CcCeEEe-ecCCEEEEecCcee
Confidence            4567787 44455556665544

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.75  E-value=0.22  Score=48.32  Aligned_cols=102  Identities=14%  Similarity=0.091  Sum_probs=63.6

Q ss_pred             eeeEEEEcCCCCEEEEE-eCCC----cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC-----------c
Q psy10942        414 GVWFVNFSPLDRILISS-SGDA----TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG-----------L  477 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~-~~dg----~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----------~  477 (537)
                      .+....+|||++++|.+ +..|    .++++|+.+++.+...-.. .....+.|.++++.|+....+.           .
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            45567889999988866 3333    5999999999776533111 1123499999988776665433           3


Q ss_pred             EEEEECCCCeeE--EEecCCccc--eeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        478 LKLWSIKTSTCV--STFDKHALK--IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       478 v~vwd~~~~~~~--~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      |+.|++.+...-  -.++.....  .           ..+   ..++|+++|+....
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~-----------~~~---~~s~d~~~l~i~~~  246 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWF-----------VSV---SRSKDGRYLFISSS  246 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSE-----------EEE---EE-TTSSEEEEEEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEE-----------EEE---EecCcccEEEEEEE
Confidence            788888665322  333333222  2           456   88999999876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG2395|consensus

Probab=95.66  E-value=0.034  Score=52.24  Aligned_cols=134  Identities=11%  Similarity=0.049  Sum_probs=93.6

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccE--E-----EEEeCCceEEEEecccccCcccccccccc
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRM--Y-----AVVTADHNISLYRLNSETGLEERPNKILK  140 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~--l-----a~~~~d~~i~iwd~~~~~~~~~~~~~~~~  140 (537)
                      .++..++....|+-.|++.|+.+.+.+.+..|.-+.+.|+.+.  |     .+|-.|+.|.-||+.-..         ..
T Consensus       347 lil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~---------~~  417 (644)
T KOG2395|consen  347 LILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQG---------KN  417 (644)
T ss_pred             eEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccC---------cc
Confidence            3444556666788899999999999998888999999887643  2     345567888889987520         11


Q ss_pred             eeEEeecchh----hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--c
Q psy10942        141 FRKQFVGFSD----EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--K  214 (537)
Q Consensus       141 ~~~~~~~~~~----~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l  214 (537)
                      .+...++|.-    ...|.+-  ..++++++++.+++    |                 ++||.       -..+..  +
T Consensus       418 kl~~~q~kqy~~k~nFsc~aT--T~sG~IvvgS~~Gd----I-----------------RLYdr-------i~~~AKTAl  467 (644)
T KOG2395|consen  418 KLAVVQSKQYSTKNNFSCFAT--TESGYIVVGSLKGD----I-----------------RLYDR-------IGRRAKTAL  467 (644)
T ss_pred             eeeeeeccccccccccceeee--cCCceEEEeecCCc----E-----------------Eeehh-------hhhhhhhcc
Confidence            2333333321    2333332  45788999999988    9                 99997       333333  7


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCC
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP  250 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~  250 (537)
                      +     +-  ..+|..+   ..+.+|++++..+..-
T Consensus       468 P-----gL--G~~I~hV---dvtadGKwil~Tc~ty  493 (644)
T KOG2395|consen  468 P-----GL--GDAIKHV---DVTADGKWILATCKTY  493 (644)
T ss_pred             c-----cc--CCceeeE---EeeccCcEEEEecccE
Confidence            7     88  8999999   9999999988766543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.65  E-value=1.4  Score=38.61  Aligned_cols=92  Identities=13%  Similarity=0.166  Sum_probs=61.4

Q ss_pred             EEEEEcCCCc-EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----CcEEEEE
Q psy10942        367 QIVSTGADGL-LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----ATIKLWC  440 (537)
Q Consensus       367 ~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d  440 (537)
                      -++.+-.-|+ ..++|....+...++...+.           +.    -.-.-.|||||++|...-.|     |.|-+||
T Consensus        82 avafARrPGtf~~vfD~~~~~~pv~~~s~~~-----------RH----fyGHGvfs~dG~~LYATEndfd~~rGViGvYd  146 (366)
T COG3490          82 AVAFARRPGTFAMVFDPNGAQEPVTLVSQEG-----------RH----FYGHGVFSPDGRLLYATENDFDPNRGVIGVYD  146 (366)
T ss_pred             eEEEEecCCceEEEECCCCCcCcEEEecccC-----------ce----eecccccCCCCcEEEeecCCCCCCCceEEEEe
Confidence            3444444443 45677777766555433222           11    12234689999988876443     7899999


Q ss_pred             CCC-ceeeeEeecCCcceEEEEEecCCCEEEEEe
Q psy10942        441 LTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTG  473 (537)
Q Consensus       441 ~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  473 (537)
                      ... .+.+.++..|.-.-..+.+.+||+.|+.+.
T Consensus       147 ~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         147 AREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             cccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence            875 456777888877788999999999998774

>KOG1916|consensus

Probab=95.58  E-value=0.0067  Score=60.41  Aligned_cols=94  Identities=15%  Similarity=0.266  Sum_probs=58.8

Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-----CceeeeEeecCCcc-eEEEEEe
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-----DYVCLKSLEGHDAS-VLRCHFI  463 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~~-v~~~~~s  463 (537)
                      .+..|..++..+++-..+-..+.+      +||||..++.+..||.+++|.+.     ...++...+.|.+. -.|..|+
T Consensus       219 l~rsHs~~~~d~a~~~~g~~~l~~------lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~  292 (1283)
T KOG1916|consen  219 LFRSHSQRVTDMAFFAEGVLKLAS------LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCH  292 (1283)
T ss_pred             HHHhcCCCcccHHHHhhchhhhee------eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeec
Confidence            344577777777666665443332      89999999999999998888653     23456666777633 3333333


Q ss_pred             cCC---------CEEEEEeC-CCcEEEEECCCCeeE
Q psy10942        464 NKG---------TQIVSTGA-DGLLKLWSIKTSTCV  489 (537)
Q Consensus       464 ~~~---------~~l~s~~~-dg~v~vwd~~~~~~~  489 (537)
                      .+.         .+++++++ +..+++|.....+++
T Consensus       293 ~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  293 KQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             cccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            321         23444443 456899987666655

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.57  E-value=0.96  Score=42.89  Aligned_cols=60  Identities=12%  Similarity=0.039  Sum_probs=36.1

Q ss_pred             cceEEEEEecCCCEEEEEeCC-------------------CcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942        455 ASVLRCHFINKGTQIVSTGAD-------------------GLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~d-------------------g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                      .....++|.|||.+.++-+..                   |.|.-++...++....-.++. ..           ..+  
T Consensus       124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~r-np-----------~Gl--  189 (367)
T TIGR02604       124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQ-NP-----------YGH--  189 (367)
T ss_pred             ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCcC-CC-----------ccc--
Confidence            347789999999877755521                   334555554443322222222 12           677  


Q ss_pred             eeeecCCCEEEEEe
Q psy10942        516 QLCSRNSDCEYRGG  529 (537)
Q Consensus       516 ~~~s~~~~~l~s~~  529 (537)
                       +|+|+|+++++-.
T Consensus       190 -~~d~~G~l~~tdn  202 (367)
T TIGR02604       190 -SVDSWGDVFFCDN  202 (367)
T ss_pred             -eECCCCCEEEEcc
Confidence             9999999887644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PHA02713 hypothetical protein; Provisional

Probab=95.51  E-value=1.5  Score=44.13  Aligned_cols=85  Identities=8%  Similarity=0.111  Sum_probs=40.6

Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCCceee--EEEEe------
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGGLKLL--NVLRG------  361 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~~~~~--~~~~~------  361 (537)
                      .+..||..+.....   ...+...... .+++. -++..++.|+.+      ..+..||+.. ..-.  ..+..      
T Consensus       273 ~v~~yd~~~~~W~~---l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~-n~W~~~~~m~~~R~~~~  346 (557)
T PHA02713        273 CILVYNINTMEYSV---ISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIEN-KIHVELPPMIKNRCRFS  346 (557)
T ss_pred             CEEEEeCCCCeEEE---CCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCC-CeEeeCCCCcchhhcee
Confidence            56778887765321   1111111111 12222 266777777753      3467788763 2211  11110      


Q ss_pred             --cCCCCEEEEEcCCC-----cEEEEECCCCe
Q psy10942        362 --HKKGTQIVSTGADG-----LLKLWSIKTST  386 (537)
Q Consensus       362 --~~~~~~l~~~~~d~-----~i~i~d~~~~~  386 (537)
                        --++...+.|+.++     .+..||..+.+
T Consensus       347 ~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~  378 (557)
T PHA02713        347 LAVIDDTIYAIGGQNGTNVERTIECYTMGDDK  378 (557)
T ss_pred             EEEECCEEEEECCcCCCCCCceEEEEECCCCe
Confidence              01255566666553     36677776553

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=95.45  E-value=2.3  Score=40.02  Aligned_cols=224  Identities=10%  Similarity=0.007  Sum_probs=92.2

Q ss_pred             eEEEE-EeCCCeEEEEECCCCceeeeeecccccc---c----CCCeEEEEEcCCCCEEEEEeC--C----CcEEEEEccC
Q psy10942        286 ELLAS-GSLDKTVKVWSTTGGLKLLNVLRGHKKG---H----EKDINCVTVSPNDKLLASGSL--D----KTVKVWSTTG  351 (537)
Q Consensus       286 ~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~----~~~v~~~~~s~~~~~l~~~~~--d----~~i~i~d~~~  351 (537)
                      ++|+. |-..+.|++.|+.+.....++ .+.++.   +    -..-..+..-|+|+.++++-.  +    |.+.++|-+ 
T Consensus        88 r~Li~PgL~SsrIyviD~~~dPr~P~l-~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~-  165 (461)
T PF05694_consen   88 RYLILPGLRSSRIYVIDTKTDPRKPRL-HKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE-  165 (461)
T ss_dssp             -EEEEEBTTT--EEEEE--S-TTS-EE-EEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT-
T ss_pred             CcEEeeeeccCcEEEEECCCCCCCCce-EeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc-
Confidence            34444 447889999999854332222 111111   1    112233445678888887532  2    345566555 


Q ss_pred             CceeeEEE-------------EecCCCCEEEEEcC--------------------CCcEEEEECCCCeeeeeeccCCcc-
Q psy10942        352 GLKLLNVL-------------RGHKKGTQIVSTGA--------------------DGLLKLWSIKTSTCVSTFDKHALK-  397 (537)
Q Consensus       352 ~~~~~~~~-------------~~~~~~~~l~~~~~--------------------d~~i~i~d~~~~~~~~~~~~~~~~-  397 (537)
                      +.......             -.++..+.+++...                    ..++.+||+.+.+.++++.-.... 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            33333322             23344566666533                    357999999999999998755432 


Q ss_pred             -eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEE-ECCCce----eeeEeec-----------------C
Q psy10942        398 -IWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLW-CLTDYV----CLKSLEG-----------------H  453 (537)
Q Consensus       398 -i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~-d~~~~~----~~~~~~~-----------------~  453 (537)
                       ..++.+..+               |+..+=+++ .-.++|..| ....++    .+..+..                 -
T Consensus       246 ~pLEvRflH~---------------P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~  310 (461)
T PF05694_consen  246 MPLEVRFLHD---------------PDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAV  310 (461)
T ss_dssp             EEEEEEE-SS---------------TT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE
T ss_pred             ceEEEEecCC---------------CCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccC
Confidence             234444333               222222222 122333333 212221    1111111                 1


Q ss_pred             CcceEEEEEecCCCEEEEEeC-CCcEEEEECCCC---eeEEEecCC----ccceecc-CCCCCCccccccceeeecCCCE
Q psy10942        454 DASVLRCHFINKGTQIVSTGA-DGLLKLWSIKTS---TCVSTFDKH----ALKIRNS-DSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~---~~~~~~~~~----~~~i~~~-~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      ..-|+.|..|.|.++|..... +|.|+.||+...   ++..++.--    ....... .....+.+.-+   ..|.||+.
T Consensus       311 P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMv---qlS~DGkR  387 (461)
T PF05694_consen  311 PPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMV---QLSLDGKR  387 (461)
T ss_dssp             ------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----E---EE-TTSSE
T ss_pred             CCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeE---EEccCCeE
Confidence            244799999999999987664 899999999753   344332210    0000000 00111122344   88999999


Q ss_pred             EEEEe
Q psy10942        525 EYRGG  529 (537)
Q Consensus       525 l~s~~  529 (537)
                      |+..+
T Consensus       388 lYvTn  392 (461)
T PF05694_consen  388 LYVTN  392 (461)
T ss_dssp             EEEE-
T ss_pred             EEEEe
Confidence            87653

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG1898|consensus

Probab=95.22  E-value=4.7  Score=42.16  Aligned_cols=62  Identities=16%  Similarity=0.283  Sum_probs=41.5

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhc----CCCcceEEEEEeccc------cEEEEEeCCceEEEEeccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQH----GLSSPLVRIVRSSVK------RMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~----~~~~~v~~~~~s~~~------~~la~~~~d~~i~iwd~~~  127 (537)
                      +...++.+-..|.+..+.......+..+    .....|.|+++.++.      ++++.++.|++++++.+..
T Consensus       548 nr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p  619 (1205)
T KOG1898|consen  548 NRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDP  619 (1205)
T ss_pred             cceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecC
Confidence            4455666655676666655332222222    233578999998765      5799999999999999886

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.16  E-value=2.4  Score=38.46  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=54.1

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeE----eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKS----LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~----~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      .|..|.|+|++.+.+.+ ..|.|++=+.. ..+.-..    +....-.+..++|.+++...|+|+ .|.+ +...+.|+-
T Consensus       188 riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGkt  264 (302)
T PF14870_consen  188 RIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKT  264 (302)
T ss_dssp             -EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS
T ss_pred             eehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCcc
Confidence            78888899988776655 77888877722 2221111    111223478999999887777665 4433 445556665


Q ss_pred             EEEecCC---ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        489 VSTFDKH---ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       489 ~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      -+.-+.-   ....           +.+   .|.++.+-++. +.+|.|.=
T Consensus       265 W~~~~~~~~~~~n~-----------~~i---~f~~~~~gf~l-G~~G~ll~  300 (302)
T PF14870_consen  265 WQKDRVGENVPSNL-----------YRI---VFVNPDKGFVL-GQDGVLLR  300 (302)
T ss_dssp             -EE-GGGTTSSS--------------EE---EEEETTEEEEE--STTEEEE
T ss_pred             ceECccccCCCCce-----------EEE---EEcCCCceEEE-CCCcEEEE
Confidence            5444321   1223           555   88766555544 57887653

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=95.16  E-value=2.1  Score=37.72  Aligned_cols=95  Identities=11%  Similarity=0.009  Sum_probs=54.4

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhh---cCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQ---HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~---~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      .+.+.+.+..+.-|++.|+.+...-..   +...+--.+  +.-.|+++.++.-|.-+.+.|+.+.+.        .++.
T Consensus        95 se~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVadlddgfLivdvsdpss--------P~la  164 (370)
T COG5276          95 SEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPSS--------PQLA  164 (370)
T ss_pred             cccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEE--EEecCCEEEEeeccCcEEEEECCCCCC--------ceee
Confidence            445777777777799999876544332   222222333  344577887777566678899987422        2333


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      .++......-..++.+   +++-.++..++.
T Consensus       165 grya~~~~d~~~v~IS---Gn~AYvA~~d~G  192 (370)
T COG5276         165 GRYALPGGDTHDVAIS---GNYAYVAWRDGG  192 (370)
T ss_pred             eeeccCCCCceeEEEe---cCeEEEEEeCCC
Confidence            4444333333455665   555555555554

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=95.11  E-value=3.2  Score=39.59  Aligned_cols=59  Identities=8%  Similarity=0.053  Sum_probs=42.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      .++..-+.||.+.+|+-+.-.....+ ..  .-..   ..+.|.+.-..|++++.+..+..|...
T Consensus       146 ~~IcVQS~DG~L~~feqe~~~f~~~l-p~--~llP---gPl~Y~~~tDsfvt~sss~~l~~Yky~  204 (418)
T PF14727_consen  146 DFICVQSMDGSLSFFEQESFAFSRFL-PD--FLLP---GPLCYCPRTDSFVTASSSWTLECYKYQ  204 (418)
T ss_pred             eEEEEEecCceEEEEeCCcEEEEEEc-CC--CCCC---cCeEEeecCCEEEEecCceeEEEecHH
Confidence            78888999999999998765432211 11  1122   346788888899999988888888765

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.82  E-value=0.1  Score=30.75  Aligned_cols=33  Identities=15%  Similarity=0.243  Sum_probs=25.9

Q ss_pred             eeeeeeeeccCC-cceEEEecCcceEEEEEcCcc
Q psy10942          4 CVTCFDVIPQIT-SEFSVHCGRDKVLFTWDLSSR   36 (537)
Q Consensus         4 ~V~~~~~~~~~~-~~~l~s~~~~g~v~iwd~~~~   36 (537)
                      +|.++.|||.+. .++|+-+-..|.|.|+|+++.
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            589999996433 268888877899999999853

It contains a characteristic DLL sequence motif.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.64  E-value=0.54  Score=46.92  Aligned_cols=101  Identities=16%  Similarity=0.198  Sum_probs=63.1

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCC--CcceEEEEE--eccccEEEEEeCCceEEEEecccccCcccccccccceeE
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGL--SSPLVRIVR--SSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~--~~~v~~~~~--s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      +..++-+....+.|||...+....+...  ++.|..+.|  .|||+.+.+.+-.+.|.+|.-..-.-....|.  ...++
T Consensus        42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~--w~~i~  119 (631)
T PF12234_consen   42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPS--WAPIR  119 (631)
T ss_pred             cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcc--cceeE
Confidence            4455555566799999998876555444  689999999  58999888888888898885421000001111  22233


Q ss_pred             E--eecch-hhhhhhhcccCCCccEEEeeecc
Q psy10942        144 Q--FVGFS-DEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus       144 ~--~~~~~-~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      .  +..|+ .+|.+.+|. +++ .+++++++.
T Consensus       120 ~i~i~~~T~h~Igds~Wl-~~G-~LvV~sGNq  149 (631)
T PF12234_consen  120 KIDISSHTPHPIGDSIWL-KDG-TLVVGSGNQ  149 (631)
T ss_pred             EEEeecCCCCCccceeEe-cCC-eEEEEeCCE
Confidence            2  23444 568899998 444 555666554

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=94.61  E-value=4.1  Score=38.46  Aligned_cols=202  Identities=15%  Similarity=0.137  Sum_probs=81.6

Q ss_pred             CCCEEEEEe-CCCcEEEEEccCC---ceeeEE-----------------EEecCCCCEEEEEcC------CCcEEEEECC
Q psy10942        331 NDKLLASGS-LDKTVKVWSTTGG---LKLLNV-----------------LRGHKKGTQIVSTGA------DGLLKLWSIK  383 (537)
Q Consensus       331 ~~~~l~~~~-~d~~i~i~d~~~~---~~~~~~-----------------~~~~~~~~~l~~~~~------d~~i~i~d~~  383 (537)
                      +.++|+..+ ..+.|+++|+...   .+..+.                 ...-++|..++++-.      -|-+.++|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            456677766 6788999998732   122222                 223345767776532      2467788888


Q ss_pred             CCeeeeeeccCCc---ceEEEEEecCCCceEEeeeeE-----EEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-
Q psy10942        384 TSTCVSTFDKHAL---KIWTLAITKDENQIITGGVWF-----VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-  454 (537)
Q Consensus       384 ~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~i~~-----~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-  454 (537)
                      +.+.....+....   .-+.+-+.|..+.+++..-..     --|.|..  +..+.....+.+||+.+.+.++++.--. 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d--~~~~~yG~~l~vWD~~~r~~~Q~idLg~~  243 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPED--LEAGKYGHSLHVWDWSTRKLLQTIDLGEE  243 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTT--HHHH-S--EEEEEETTTTEEEEEEES-TT
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhH--hhcccccCeEEEEECCCCcEeeEEecCCC
Confidence            7777666654322   223344444444433321000     0011111  1111224589999999999999987433 


Q ss_pred             -cceEEEEEecC--CCEEEE-EeCCCcEEEE-ECCCCeeE--EEecCCccceeccCCCC--------CCccccccceeee
Q psy10942        455 -ASVLRCHFINK--GTQIVS-TGADGLLKLW-SIKTSTCV--STFDKHALKIRNSDSEN--------DHKGFGLPRQLCS  519 (537)
Q Consensus       455 -~~v~~~~~s~~--~~~l~s-~~~dg~v~vw-d~~~~~~~--~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~s  519 (537)
                       .....+.|..+  ..+=++ +.-..+|..| ..+.++-.  ..+.....++.......        ....+.+   ..|
T Consensus       244 g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI---~iS  320 (461)
T PF05694_consen  244 GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDI---LIS  320 (461)
T ss_dssp             EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------E---EE-
T ss_pred             CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeE---EEc
Confidence             23567888654  333332 2234444444 33444311  11111111110000000        1223667   999


Q ss_pred             cCCCEEEEEeC-CCCEEeC
Q psy10942        520 RNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       520 ~~~~~l~s~~~-dg~i~vW  537 (537)
                      .|.++|+.++. +|.||.|
T Consensus       321 lDDrfLYvs~W~~GdvrqY  339 (461)
T PF05694_consen  321 LDDRFLYVSNWLHGDVRQY  339 (461)
T ss_dssp             TTS-EEEEEETTTTEEEEE
T ss_pred             cCCCEEEEEcccCCcEEEE
Confidence            99999987654 7777754

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG4441|consensus

Probab=94.50  E-value=4.9  Score=40.58  Aligned_cols=178  Identities=15%  Similarity=0.153  Sum_probs=90.1

Q ss_pred             eEEEEEeCC------CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEEccCC-c
Q psy10942        286 ELLASGSLD------KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT-----VKVWSTTGG-L  353 (537)
Q Consensus       286 ~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-----i~i~d~~~~-~  353 (537)
                      ...++|+.|      .++..||..+.+-..   ...+...........+  +|...++|+.||.     +-.||.... .
T Consensus       334 ~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~---~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W  408 (571)
T KOG4441|consen  334 KLYVVGGYDSGSDRLSSVERYDPRTNQWTP---VAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKW  408 (571)
T ss_pred             EEEEEccccCCCcccceEEEecCCCCceec---cCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcc
Confidence            577888888      367788888776322   1122222222222222  6888899998864     566666521 0


Q ss_pred             eeeEEE--------EecCCCCEEEEEcCCC------cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        354 KLLNVL--------RGHKKGTQIVSTGADG------LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       354 ~~~~~~--------~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                      ..+..+        ...-++...++|+.++      ++..||..+++-...-.-...                 ....-.
T Consensus       409 ~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~-----------------R~~~g~  471 (571)
T KOG4441|consen  409 TPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTR-----------------RSGFGV  471 (571)
T ss_pred             cccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccc-----------------cccceE
Confidence            111101        1112366677777554      456677666543322111111                 000011


Q ss_pred             EcCCCCEEEEEeCCC-----cEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCCC-----cEEEEECCCCe
Q psy10942        420 FSPLDRILISSSGDA-----TIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGADG-----LLKLWSIKTST  487 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~vwd~~~~~  487 (537)
                      -.-++.+.+.|+.|+     +|..||..+.+....  .......+-...  -+++..++|+.||     +|..||..+.+
T Consensus       472 a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  472 AVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             EEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEE--ECCEEEEEecccCccccceeEEcCCCCCc
Confidence            222466777787766     377788776443322  222222222222  2566777888775     46667665544

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=94.42  E-value=3.8  Score=37.23  Aligned_cols=108  Identities=14%  Similarity=0.080  Sum_probs=55.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCC--ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTD--YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      .+..+..++||++++++.......-||--.  .++....  -...|.+|.|+|++.+.+.+ ..|.|++=+..  .....
T Consensus       146 s~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~--~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~--~~~~~  220 (302)
T PF14870_consen  146 SINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRN--SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP--DDGET  220 (302)
T ss_dssp             -EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T--TEEEE
T ss_pred             eeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccC--ccceehhceecCCCCEEEEe-CCcEEEEccCC--CCccc
Confidence            678888899999999887655556777432  2332222  35789999999998766644 88888877721  11223


Q ss_pred             ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV  534 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i  534 (537)
                      +..+..++    .........+   +|.+++...++|+ .|.+
T Consensus       221 w~~~~~~~----~~~~~~~ld~---a~~~~~~~wa~gg-~G~l  255 (302)
T PF14870_consen  221 WSEPIIPI----KTNGYGILDL---AYRPPNEIWAVGG-SGTL  255 (302)
T ss_dssp             E---B-TT----SS--S-EEEE---EESSSS-EEEEES-TT-E
T ss_pred             cccccCCc----ccCceeeEEE---EecCCCCEEEEeC-CccE
Confidence            22221111    0000011555   9999988777665 4444

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=94.22  E-value=1.3  Score=39.26  Aligned_cols=149  Identities=12%  Similarity=0.044  Sum_probs=76.9

Q ss_pred             eeeeeeeeccCCcceEEEec---CcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          4 CVTCFDVIPQITSEFSVHCG---RDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~---~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .+...+.+  +|++.++...   ....|.++.  .+...........+..-  .+.+        ++...+....+...+
T Consensus        25 ~~~s~AvS--~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~~~g~~l~~P--S~d~--------~g~~W~v~~~~~~~~   90 (253)
T PF10647_consen   25 DVTSPAVS--PDGSRVAAVSEGDGGRSLYVGP--AGGPVRPVLTGGSLTRP--SWDP--------DGWVWTVDDGSGGVR   90 (253)
T ss_pred             cccceEEC--CCCCeEEEEEEcCCCCEEEEEc--CCCcceeeccCCccccc--cccC--------CCCEEEEEcCCCceE
Confidence            46778888  7877666554   233455554  33333333223344444  3455        334444434444455


Q ss_pred             eee-ccceeh----hhhcCCCcceEEEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942         81 YYE-TSAVKE----LYQHGLSSPLVRIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI  152 (537)
Q Consensus        81 ~wd-~~~~~~----~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  152 (537)
                      ++. ..+++.    +......+.|.++++||||..+|....   ++.|.+=-+..+...  .+................+
T Consensus        91 ~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g--~~~~l~~~~~~~~~~~~~v  168 (253)
T PF10647_consen   91 VVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDG--VPRRLTGPRRVAPPLLSDV  168 (253)
T ss_pred             EEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCC--CcceeccceEecccccCcc
Confidence            553 333322    111111128999999999999888773   466777665532111  0111112222222334568


Q ss_pred             hhhhcccCCCccEEEee
Q psy10942        153 LDIALLGEEDSHIVVAS  169 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~  169 (537)
                      ..+.|. +++..++.+.
T Consensus       169 ~~v~W~-~~~~L~V~~~  184 (253)
T PF10647_consen  169 TDVAWS-DDSTLVVLGR  184 (253)
T ss_pred             eeeeec-CCCEEEEEeC
Confidence            999998 5555544443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.22  E-value=5.7  Score=38.49  Aligned_cols=245  Identities=13%  Similarity=0.038  Sum_probs=106.8

Q ss_pred             CcccCCCeeeec-----cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC----------CCeEEE
Q psy10942        235 KTVKEEDLFPRQ-----SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL----------DKTVKV  299 (537)
Q Consensus       235 ~~s~~~~~l~~~-----~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----------d~~i~i  299 (537)
                      .++|+|+++|.+     +....++  +.|+.++..............+.+..... .++.+...          ...|+.
T Consensus       130 ~~Spdg~~la~~~s~~G~e~~~l~--v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~-~~~y~~~~~~~~~~~~~~~~~v~~  206 (414)
T PF02897_consen  130 SVSPDGKRLAYSLSDGGSEWYTLR--VFDLETGKFLPDGIENPKFSSVSWSDDGK-GFFYTRFDEDQRTSDSGYPRQVYR  206 (414)
T ss_dssp             EETTTSSEEEEEEEETTSSEEEEE--EEETTTTEEEEEEEEEEESEEEEECTTSS-EEEEEECSTTTSS-CCGCCEEEEE
T ss_pred             eECCCCCEEEEEecCCCCceEEEE--EEECCCCcCcCCcccccccceEEEeCCCC-EEEEEEeCcccccccCCCCcEEEE
Confidence            789999998853     2234588  99998863211110000000011111111 23333322          234778


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCC---ceeeEEEEecCCCCEEEEEc
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGG---LKLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~---~~~~~~~~~~~~~~~l~~~~  372 (537)
                      |++.+......+ .............+..++|+++++.....    ..+++.++...   ......+.....+.......
T Consensus       207 ~~~gt~~~~d~l-vfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~  285 (414)
T PF02897_consen  207 HKLGTPQSEDEL-VFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDH  285 (414)
T ss_dssp             EETTS-GGG-EE-EEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEE
T ss_pred             EECCCChHhCee-EEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEc
Confidence            888776542111 11111112226788899999988764332    34777788742   23444444444333322222


Q ss_pred             CCCcEEEEEC---CCCeeeeeeccCCc--ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCC--cEEEEECCCc
Q psy10942        373 ADGLLKLWSI---KTSTCVSTFDKHAL--KIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDA--TIKLWCLTDY  444 (537)
Q Consensus       373 ~d~~i~i~d~---~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg--~i~i~d~~~~  444 (537)
                      ..+.+.+.--   ..++.+..-.....  ....+.+.+....    .+..+.  ..+.+|+.. ..++  .|+++++..+
T Consensus       286 ~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~----~l~~~~--~~~~~Lvl~~~~~~~~~l~v~~~~~~  359 (414)
T PF02897_consen  286 HGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDV----SLEDVS--LFKDYLVLSYRENGSSRLRVYDLDDG  359 (414)
T ss_dssp             ETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSE----EEEEEE--EETTEEEEEEEETTEEEEEEEETT-T
T ss_pred             cCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCce----eEEEEE--EECCEEEEEEEECCccEEEEEECCCC
Confidence            2333322211   11111111101110  1111222222211    122232  234444443 3443  5888999833


Q ss_pred             eeeeEeec-CCcceEEEEEecCCCEEE-EEeC---CCcEEEEECCCCeeE
Q psy10942        445 VCLKSLEG-HDASVLRCHFINKGTQIV-STGA---DGLLKLWSIKTSTCV  489 (537)
Q Consensus       445 ~~~~~~~~-~~~~v~~~~~s~~~~~l~-s~~~---dg~v~vwd~~~~~~~  489 (537)
                      .....+.. -.+.|..+...+++..+. +.+.   -++++.||+.+++..
T Consensus       360 ~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  360 KESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             cEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence            44444433 334456665556555443 2222   357889999888754

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.19  E-value=0.56  Score=45.34  Aligned_cols=117  Identities=10%  Similarity=0.028  Sum_probs=73.4

Q ss_pred             eeeeeeeeecc--CCcceEEEecCcceEEEEEcC-----ccceeee--ecccccc--ceeeeEeecCccccccCCcEEEE
Q psy10942          3 FCVTCFDVIPQ--ITSEFSVHCGRDKVLFTWDLS-----SRKQLRS--YPAYESL--ETCAVFHLSDETESKSGGKTFVL   71 (537)
Q Consensus         3 ~~V~~~~~~~~--~~~~~l~s~~~~g~v~iwd~~-----~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   71 (537)
                      +-|..+.|.|.  .+-..|++.-....|.+|.+.     +.+.+..  -...|++  ..-+++|.|        ....++
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP--------k~~iL~  128 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP--------KKAILT  128 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccC--------CCceEE
Confidence            45778888863  233467777788889999884     2333332  2233333  333458999        445666


Q ss_pred             EeCccceEEeeecc--ceehhhhcCCCcceEEEEEeccccEEEEEeC-CceEEEEeccc
Q psy10942         72 AGGEKSLLHYYETS--AVKELYQHGLSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNS  127 (537)
Q Consensus        72 ~~~~~~~i~~wd~~--~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~  127 (537)
                      +-.....=.+++..  +.+....++..+-|.|.+|.+||+.|+++-. .=.-++||-..
T Consensus       129 VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  129 VLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             EEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            55544433455543  3455566777789999999999998776643 33457787543

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.11  E-value=0.34  Score=28.63  Aligned_cols=31  Identities=26%  Similarity=0.403  Sum_probs=25.6

Q ss_pred             CCeEEEEEcCCC---CEEEEEeCCCcEEEEEccC
Q psy10942        321 KDINCVTVSPND---KLLASGSLDKTVKVWSTTG  351 (537)
Q Consensus       321 ~~v~~~~~s~~~---~~l~~~~~d~~i~i~d~~~  351 (537)
                      +.|+++.|+|+.   .+|+.+-.-|.+.++|++.
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            368999999854   4888888889999999983

It contains a characteristic DLL sequence motif.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.10  E-value=0.3  Score=42.09  Aligned_cols=61  Identities=13%  Similarity=0.097  Sum_probs=47.3

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhc---------------CCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQH---------------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~---------------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      ++.++++.+.+|.+++||+.+++.+...               .....|..+.++.+|.-|++-+ +|..+.|+.+-
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            5578999999999999999988764443               2335789999998988777655 47788888764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.07  E-value=3.4  Score=41.50  Aligned_cols=68  Identities=10%  Similarity=0.258  Sum_probs=44.2

Q ss_pred             eeeEEEE--cCCCCEEEEEeCCCcEEEEECC---------CceeeeEe--ecCC-cceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        414 GVWFVNF--SPLDRILISSSGDATIKLWCLT---------DYVCLKSL--EGHD-ASVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       414 ~i~~~~~--s~~~~~l~~~~~dg~i~i~d~~---------~~~~~~~~--~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                      .|.++.|  .|+++.+++.+....|.+|.-.         +..++..+  ..|. .+|.+..|.++|.+++.+  ++.+.
T Consensus        74 ~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlf  151 (631)
T PF12234_consen   74 PIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLF  151 (631)
T ss_pred             ceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEE
Confidence            4555554  4678888887888888888431         22333333  2333 578999999999666544  34688


Q ss_pred             EEEC
Q psy10942        480 LWSI  483 (537)
Q Consensus       480 vwd~  483 (537)
                      |+|-
T Consensus       152 v~dk  155 (631)
T PF12234_consen  152 VFDK  155 (631)
T ss_pred             EECC
Confidence            8864

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.01  E-value=3  Score=43.04  Aligned_cols=72  Identities=13%  Similarity=0.205  Sum_probs=50.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCC----------cee---eeEe--------ecCCcceEEEEEecC---CCEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTD----------YVC---LKSL--------EGHDASVLRCHFINK---GTQI  469 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~----------~~~---~~~~--------~~~~~~v~~~~~s~~---~~~l  469 (537)
                      .|..+.++|+|++++..+..| |.|..+..          ++.   .+++        ..+...|..+.|+|.   +.+|
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            688888999999888887754 44544432          111   1111        123456889999995   5899


Q ss_pred             EEEeCCCcEEEEECCCC
Q psy10942        470 VSTGADGLLKLWSIKTS  486 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~  486 (537)
                      +.-..|+++|+||+...
T Consensus       165 ~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  165 VVLTSDNTLRLYDISDP  181 (717)
T ss_pred             EEEecCCEEEEEecCCC
Confidence            99999999999999753

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PHA03098 kelch-like protein; Provisional

Probab=93.54  E-value=3.8  Score=41.32  Aligned_cols=63  Identities=16%  Similarity=0.134  Sum_probs=33.1

Q ss_pred             CCCEEEEEeCC--------CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        423 LDRILISSSGD--------ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       423 ~~~~l~~~~~d--------g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                      ++++.+.|+.+        ..+.+||..+.+-  +..+.........+.  .++++++.|+.+     +.+.+||..+.+
T Consensus       437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence            45566666532        2388888876432  222211111111222  266777777654     468888877653

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.54  E-value=1  Score=45.45  Aligned_cols=120  Identities=13%  Similarity=0.222  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCcEEEEECCCCe-eeeeeccCC-cceEEEEEecCCCceEEeeeeEEEEc--CCCCEEEEEeCCCcEEEE
Q psy10942        364 KGTQIVSTGADGLLKLWSIKTST-CVSTFDKHA-LKIWTLAITKDENQIITGGVWFVNFS--PLDRILISSSGDATIKLW  439 (537)
Q Consensus       364 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~-~~i~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~dg~i~i~  439 (537)
                      ....|+.+..||.|.+|...+-. .+....... .....+...|+-..-+....+.++++  ...++||+++....|.||
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            45566777777777777653210 000000000 00000222222222222368888988  788899999888888888


Q ss_pred             ECCCc--eeee-EeecCCcceEEEEEecCC---C---EEEEEeCCCcEEEEEC
Q psy10942        440 CLTDY--VCLK-SLEGHDASVLRCHFINKG---T---QIVSTGADGLLKLWSI  483 (537)
Q Consensus       440 d~~~~--~~~~-~~~~~~~~v~~~~~s~~~---~---~l~s~~~dg~v~vwd~  483 (537)
                      -....  +... .-..|...|-++.|-++.   .   .|++++-.|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            65431  1111 111255678999997743   2   7888889999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=92.96  E-value=6.2  Score=34.93  Aligned_cols=263  Identities=10%  Similarity=-0.020  Sum_probs=123.8

Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc----eEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV----ELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                      +++...+..+.-++  +.|+.+...+...-+-+.    .+. ..++    ++...+..|.-+.+.|+.+...+..  ...
T Consensus        96 e~yvyvad~ssGL~--IvDIS~P~sP~~~~~lnt----~gy-aygv~vsGn~aYVadlddgfLivdvsdpssP~l--agr  166 (370)
T COG5276          96 EEYVYVADWSSGLR--IVDISTPDSPTLIGFLNT----DGY-AYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQL--AGR  166 (370)
T ss_pred             ccEEEEEcCCCceE--EEeccCCCCcceeccccC----Cce-EEEEEecCCEEEEeeccCcEEEEECCCCCCcee--eee
Confidence            34666666667788  889888654433211110    000 0111    4566666566667788877654322  222


Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-CCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                      ..........++.|  |++-..+..|+-+.+.|+.....+...-..... +.+-+.. .+....+-+..++-.+......
T Consensus       167 ya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~v-sdnr~y~vvy~egvlivd~s~~  243 (370)
T COG5276         167 YALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSV-SDNRAYLVVYDEGVLIVDVSGP  243 (370)
T ss_pred             eccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEe-cCCeeEEEEcccceEEEecCCC
Confidence            33333334566665  778888889999999999854444333222222 2222222 2223333333333333222222


Q ss_pred             CcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee---eeEeecCCcceEEEEEecCCCEEEE
Q psy10942        395 ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC---LKSLEGHDASVLRCHFINKGTQIVS  471 (537)
Q Consensus       395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s  471 (537)
                      +.+-.--...+....    .++  .+.-.+++......+..+.+-|+.+..-   ...+......-..+..  .+.++..
T Consensus       244 ssp~~~gsyet~~p~----~~s--~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~yi  315 (370)
T COG5276         244 SSPTVFGSYETSNPV----SIS--TVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYI  315 (370)
T ss_pred             CCceEeeccccCCcc----ccc--ceecccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE--ecCeeEe
Confidence            211100011111100    122  2233355566666666666666654211   1111111111222322  2345555


Q ss_pred             EeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        472 TGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +..+ ...+-+....+......+....+           .+.   +.+-+.+.+.+...++.+.||
T Consensus       316 adkn-~g~vV~~s~~s~m~~~~g~~ti~-----------~s~---~v~~~~q~~y~~d~~~gl~i~  366 (370)
T COG5276         316 ADKN-TGAVVDASPPSMMDKRPGRPTIG-----------QSC---DVSVDTQIIYSTDYNGGLSII  366 (370)
T ss_pred             ccCC-ceEEEeCCChhhcccccCcceEe-----------eec---ceEEEeeEEEEeecCCCEEEE
Confidence            5444 44455554433333333333333           444   556677788888889888876

>PHA02790 Kelch-like protein; Provisional

Probab=92.64  E-value=10  Score=37.62  Aligned_cols=60  Identities=8%  Similarity=0.150  Sum_probs=30.8

Q ss_pred             CCCEEEEEeCCCcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        423 LDRILISSSGDATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       423 ~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                      ++++.+.|   |.+.+||..+.+-  +..+....... +++ .-+++..+.||.+     ..+..||..+++
T Consensus       407 ~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~-~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~  473 (480)
T PHA02790        407 GRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNP-ELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTYS  473 (480)
T ss_pred             CCEEEEEC---CceEEecCCCCcEeEcCCCCCCcccc-EEE-EECCEEEEECCcCCCcccceEEEEECCCCe
Confidence            45556665   3567888766432  22222111112 222 2366777777754     346667665543

>PRK10115 protease 2; Provisional

Probab=92.07  E-value=2.9  Score=43.30  Aligned_cols=79  Identities=10%  Similarity=-0.022  Sum_probs=50.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC------CcEEEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD------GLLKLWS  482 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d------g~v~vwd  482 (537)
                      .+..+.+|||+++|+.+...     ..|++.|+.+++.+...-....  ..++|++|++.|+....+      ..|+.++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            56677889999988876432     3588889988764322221211  469999998876655432      3578888


Q ss_pred             CCCC--eeEEEecC
Q psy10942        483 IKTS--TCVSTFDK  494 (537)
Q Consensus       483 ~~~~--~~~~~~~~  494 (537)
                      +.++  +....+..
T Consensus       206 lgt~~~~d~lv~~e  219 (686)
T PRK10115        206 IGTPASQDELVYEE  219 (686)
T ss_pred             CCCChhHCeEEEee
Confidence            8877  33334443

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=92.04  E-value=2.9  Score=40.36  Aligned_cols=53  Identities=9%  Similarity=0.105  Sum_probs=36.8

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCce--eeeEee-----cCCcceEEEEEecCC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYV--CLKSLE-----GHDASVLRCHFINKG  466 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~-----~~~~~v~~~~~s~~~  466 (537)
                      ..+.|+|.||+++|++--..|.|++++..++.  .+..+.     ...+....|+++|+-
T Consensus        31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            56789999999888776556999999865432  222111     125668999999873

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG4460|consensus

Probab=91.99  E-value=2.9  Score=40.04  Aligned_cols=76  Identities=12%  Similarity=0.151  Sum_probs=49.4

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEE---------CCCceeeeEee-----------cCCcceEEEEEecCC---CEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWC---------LTDYVCLKSLE-----------GHDASVLRCHFINKG---TQIV  470 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d---------~~~~~~~~~~~-----------~~~~~v~~~~~s~~~---~~l~  470 (537)
                      .|..+..++.|..++-.+.+|.+.++=         +++++..-..+           ...-.+...+|+|+.   ..|.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            567777888888888877777554432         12232221111           111236778999964   6788


Q ss_pred             EEeCCCcEEEEECCCCeeE
Q psy10942        471 STGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       471 s~~~dg~v~vwd~~~~~~~  489 (537)
                      .-+.|+.+|+||+.....+
T Consensus       185 iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  185 LLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEecCcEEEEEecCCcchh
Confidence            8889999999999765544

>KOG4499|consensus

Probab=91.93  E-value=7.2  Score=33.27  Aligned_cols=90  Identities=9%  Similarity=-0.057  Sum_probs=62.5

Q ss_pred             eEEEEcCCCCEEEEE-eCCCcEEEEE--CCCce-----eeeEeecC----CcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        416 WFVNFSPLDRILISS-SGDATIKLWC--LTDYV-----CLKSLEGH----DASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~-~~dg~i~i~d--~~~~~-----~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      +.++|+.+.+.+... +.+-.|.-||  ..+|.     .+..++..    .-..-.++...+|++.++.-..++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            457888777666544 4556776677  44442     23333321    111234566778888888888899999999


Q ss_pred             CCCeeEEEecCCccceeccCCCCCCccccccceeee
Q psy10942        484 KTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCS  519 (537)
Q Consensus       484 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  519 (537)
                      .+|+.+..+.-....+           +++   +|-
T Consensus       241 ~tGK~L~eiklPt~qi-----------tsc---cFg  262 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQI-----------TSC---CFG  262 (310)
T ss_pred             CCCcEEEEEEcCCCce-----------EEE---Eec
Confidence            9999999998888888           888   884

>KOG2377|consensus

Probab=91.90  E-value=4.2  Score=38.28  Aligned_cols=67  Identities=12%  Similarity=0.197  Sum_probs=47.3

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      ++|.++.||+|.+.||+--.+.+|.+++...++..       .+...+.+..+..|...+|+ . ..-++..+..+
T Consensus        67 G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~-------l~~~~~ck~k~~~IlGF~W~-~-s~e~A~i~~~G  133 (657)
T KOG2377|consen   67 GEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ-------LEYTQECKTKNANILGFCWT-S-STEIAFITDQG  133 (657)
T ss_pred             CceeEEEeccCcceEEEEecCceEEEEecCCCchh-------hHHHHHhccCcceeEEEEEe-c-CeeEEEEecCC
Confidence            69999999999999999999999999998653211       23333344445567888887 3 35566555544

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.90  E-value=1.5  Score=37.91  Aligned_cols=66  Identities=14%  Similarity=0.255  Sum_probs=50.3

Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCceeeeEe-------e-------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYVCLKSL-------E-------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~-------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      +..++++|++.+.+|.+++||+.+++.+..-       .       .....|..+.++.+|.-|++-+ +|..+.|+.+-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            4556888999999999999999987654432       1       2446688999998888777765 57889998754


Q ss_pred             C
Q psy10942        486 S  486 (537)
Q Consensus       486 ~  486 (537)
                      +
T Consensus        97 ~   97 (219)
T PF07569_consen   97 G   97 (219)
T ss_pred             c
Confidence            3

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PHA03098 kelch-like protein; Provisional

Probab=91.37  E-value=7.8  Score=39.13  Aligned_cols=63  Identities=13%  Similarity=0.073  Sum_probs=32.5

Q ss_pred             CCCEEEEEeCC------CcEEEEECCCceee--eEeecCCcceEEEEEecCCCEEEEEeCCC--------cEEEEECCCC
Q psy10942        423 LDRILISSSGD------ATIKLWCLTDYVCL--KSLEGHDASVLRCHFINKGTQIVSTGADG--------LLKLWSIKTS  486 (537)
Q Consensus       423 ~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--------~v~vwd~~~~  486 (537)
                      ++++.+.|+.+      ..+..||..+.+-.  ..+...... .+ +...+++.++.|+.++        .+.+||..++
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GC-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ce-EEEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            45666666632      45888998764322  221111111 11 2233566666666432        3788888765


Q ss_pred             e
Q psy10942        487 T  487 (537)
Q Consensus       487 ~  487 (537)
                      +
T Consensus       467 ~  467 (534)
T PHA03098        467 K  467 (534)
T ss_pred             c
Confidence            4

>KOG3630|consensus

Probab=91.29  E-value=2.1  Score=44.93  Aligned_cols=101  Identities=10%  Similarity=0.056  Sum_probs=63.6

Q ss_pred             eeEEEEcCCC-CEEEEEeCCCcEEEEECCCcee-eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        415 VWFVNFSPLD-RILISSSGDATIKLWCLTDYVC-LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       415 i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ..++.|.|.= ...++...|+.|++..+..... ...+. -....++++|+|.|+.++.|-..|++.-|.. +.+....+
T Consensus       158 ~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~i  235 (1405)
T KOG3630|consen  158 QLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEI  235 (1405)
T ss_pred             cccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeec-ccceeecc
Confidence            4456666653 2345556788888877654222 22222 3456899999999999999999999999875 45544444


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      ...  ++     +..++..+|   +|-..-.+|++
T Consensus       236 p~P--p~-----~e~yrvl~v---~Wl~t~eflvv  260 (1405)
T KOG3630|consen  236 PEP--PV-----EENYRVLSV---TWLSTQEFLVV  260 (1405)
T ss_pred             cCC--Cc-----CCCcceeEE---EEecceeEEEE
Confidence            322  11     112222666   88777777765

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=90.97  E-value=2.2  Score=39.67  Aligned_cols=50  Identities=18%  Similarity=0.195  Sum_probs=33.4

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee---eeEe----ecCCcceEEEEEecC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC---LKSL----EGHDASVLRCHFINK  465 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~----~~~~~~v~~~~~s~~  465 (537)
                      ..+.|+|.|||+++++ ...|.|++++ ..+..   +..+    .........++++|+
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            4578999999987775 5589999999 44433   2222    123456799999994

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=90.93  E-value=3.1  Score=39.06  Aligned_cols=162  Identities=14%  Similarity=0.116  Sum_probs=95.2

Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec-C---------------CCCEEEEEcCCCcEEE
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH-K---------------KGTQIVSTGADGLLKL  379 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~---------------~~~~l~~~~~d~~i~i  379 (537)
                      +......+..+-..|||+.++.-+. ..+.++++.+..-..+.+... +               .+..+.+.+.||-|.-
T Consensus       216 L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ  294 (733)
T COG4590         216 LSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQ  294 (733)
T ss_pred             cCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceee
Confidence            3344566788889999999988765 778888887433222222222 1               2667888899998877


Q ss_pred             E-ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceE
Q psy10942        380 W-SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVL  458 (537)
Q Consensus       380 ~-d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~  458 (537)
                      | |.+.+..     .|-..+....+.|.       .+..+.-..+.+-+++-+.+|++.++.....+.+..-. --..+.
T Consensus       295 WFdvr~~~~-----p~l~h~R~f~l~pa-------~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~  361 (733)
T COG4590         295 WFDVRRDGQ-----PHLNHIRNFKLAPA-------EVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQ  361 (733)
T ss_pred             eeeeecCCC-----CcceeeeccccCcc-------cceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcc
Confidence            6 5543321     11111111222221       22222222234566777788888887654433332222 223566


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        459 RCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      -+++||.+.+|++- ..|.++++.+++..+..++
T Consensus       362 ~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~Peisw  394 (733)
T COG4590         362 LVAMSPNQAYLLSE-DQGKIRLAQLENRNPEISW  394 (733)
T ss_pred             eeeeCcccchheee-cCCceEEEEecCCCCCccH
Confidence            78999999999875 3567999998876554443

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=90.90  E-value=8.6  Score=32.20  Aligned_cols=178  Identities=17%  Similarity=0.145  Sum_probs=94.0

Q ss_pred             EEEEcCCCCEEEEEeC--CCcEEEEEccCCceeeEEEEecCC----------CCEE-EEEcCCCcEEEEECCCCeeeeee
Q psy10942        325 CVTVSPNDKLLASGSL--DKTVKVWSTTGGLKLLNVLRGHKK----------GTQI-VSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l-~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      .+.+. +|+++.+.+.  ...|+.||+. +++.+......++          ++.+ .-.-.+|.-..+|.++.+++..+
T Consensus        50 GL~~~-~g~i~esTG~yg~S~ir~~~L~-~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~  127 (262)
T COG3823          50 GLEYL-DGHILESTGLYGFSKIRVSDLT-TGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRF  127 (262)
T ss_pred             ceeee-CCEEEEeccccccceeEEEecc-CceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccc
Confidence            34443 4556666543  3469999998 5555555444432          2333 33445777788888887777665


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec--CCc---ceEEEEEecCC
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG--HDA---SVLRCHFINKG  466 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~---~v~~~~~s~~~  466 (537)
                      .-..                  .-+.++  .|++-|..++...+++.-|.++.....++..  ...   .++.+.|- ||
T Consensus       128 ~y~G------------------eGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG  186 (262)
T COG3823         128 SYEG------------------EGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DG  186 (262)
T ss_pred             ccCC------------------cceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-cc
Confidence            4332                  222232  3444466666666777777665433333221  111   23344443 55


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEecCCccc-eeccCCCCCCccccccceeeecCCCEE-EEE
Q psy10942        467 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALK-IRNSDSENDHKGFGLPRQLCSRNSDCE-YRG  528 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~s~~~~~l-~s~  528 (537)
                      ...|-.=.+..|...+.++|+.+..+....-. -...+..+....+.+   ++-|++..+ ++|
T Consensus       187 ~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGI---A~~~~~~r~~iTG  247 (262)
T COG3823         187 ELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGI---AHDPQQDRFLITG  247 (262)
T ss_pred             EEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccce---eecCcCCeEEEec
Confidence            55555555566777777888777655432100 001111112222566   999998544 444

>KOG2377|consensus

Probab=90.88  E-value=8  Score=36.53  Aligned_cols=99  Identities=12%  Similarity=0.190  Sum_probs=66.6

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee----eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC-ee
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL----KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS-TC  488 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~-~~  488 (537)
                      +|.++.||+|.+.||+-..+..|.+++....+..    .+.+.....|....|+.+ .-+|..+..| +-+|..... +.
T Consensus        68 ~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrs  145 (657)
T KOG2377|consen   68 EIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRS  145 (657)
T ss_pred             ceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhh
Confidence            8999999999999999999999999998443322    223333456889999876 5566665555 666655332 23


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      ++..+.|.-.|           .-.   .|.++.+.+.-+
T Consensus       146 lRlVks~~~nv-----------nWy---~yc~et~v~LL~  171 (657)
T KOG2377|consen  146 LRLVKSHNLNV-----------NWY---MYCPETAVILLS  171 (657)
T ss_pred             hhhhhhcccCc-----------cEE---EEccccceEeee
Confidence            34445555556           555   677877755443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=90.88  E-value=12  Score=38.30  Aligned_cols=109  Identities=11%  Similarity=0.124  Sum_probs=66.2

Q ss_pred             eeeEEEEcC--CCCEEEEEeCCCcEEEEECCC-------c-------------eeeeEeecCCcceEEEEEe--cCCCEE
Q psy10942        414 GVWFVNFSP--LDRILISSSGDATIKLWCLTD-------Y-------------VCLKSLEGHDASVLRCHFI--NKGTQI  469 (537)
Q Consensus       414 ~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~-------~-------------~~~~~~~~~~~~v~~~~~s--~~~~~l  469 (537)
                      .|+.|....  +...|+.+..||.|.+|.+++       .             ++...+. -.....+++++  ...++|
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence            344444333  456889999999999996632       0             0122222 23468899998  778888


Q ss_pred             EEEeCCCcEEEEECCCCee-EEEec--CCccceeccCCCCCCccccccceeeecCC---C---EEEEEeCCCCEEeC
Q psy10942        470 VSTGADGLLKLWSIKTSTC-VSTFD--KHALKIRNSDSENDHKGFGLPRQLCSRNS---D---CEYRGGWSPQVVVY  537 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~~~-~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~s~~~---~---~l~s~~~dg~i~vW  537 (537)
                      |+++....|.||-...... ...-.  .|...|           -+|   +|-++.   .   .|+.++..|.+.+|
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNI-----------P~V---SFl~~~~d~~G~v~v~a~dI~G~v~~~  243 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNI-----------PNV---SFLDDDLDPNGHVKVVATDISGEVWTF  243 (717)
T ss_pred             EEecCCceEEEEEEeccccccccccccccccCC-----------Cee---EeecCCCCCccceEEEEEeccCcEEEE
Confidence            8888888888876543211 10100  122223           334   786654   2   77788999988764

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG1916|consensus

Probab=90.88  E-value=0.16  Score=51.31  Aligned_cols=76  Identities=14%  Similarity=0.223  Sum_probs=52.1

Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEE-----------EecCCCEEEEEeCCCcEEEEECC----
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH-----------FINKGTQIVSTGADGLLKLWSIK----  484 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~-----------~s~~~~~l~s~~~dg~v~vwd~~----  484 (537)
                      |-++.-++..+-.++.|++.+...... ..+.+|...++.++           .||||+.+|.++.||.+++|.+.    
T Consensus       191 ~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~  269 (1283)
T KOG1916|consen  191 IAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGK  269 (1283)
T ss_pred             cccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecc
Confidence            334556777888889998887765322 34455766555443           68999999999999999888753    


Q ss_pred             -CCeeEEEecCCc
Q psy10942        485 -TSTCVSTFDKHA  496 (537)
Q Consensus       485 -~~~~~~~~~~~~  496 (537)
                       .-.++...+.|+
T Consensus       270 ~~~rclhewkphd  282 (1283)
T KOG1916|consen  270 IVHRCLHEWKPHD  282 (1283)
T ss_pred             ccHhhhhccCCCC
Confidence             234445556666

>PRK13684 Ycf48-like protein; Provisional

Probab=90.68  E-value=14  Score=34.41  Aligned_cols=105  Identities=10%  Similarity=0.031  Sum_probs=57.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      .+.++.+.++++.++++ ..|.+.+=....+..-.....    -...+.++.+.|++..++ ++.+|.+. .....|+.-
T Consensus       216 ~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW  292 (334)
T PRK13684        216 RLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTW  292 (334)
T ss_pred             cceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCC
Confidence            67778888888877765 456654322333322221111    123478889999877555 55667554 445555544


Q ss_pred             EEecCCc---cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        490 STFDKHA---LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       490 ~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      ...+...   ...           +.+   .|..+++.+++ +..|.|.-
T Consensus       293 ~~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~-G~~G~il~  327 (334)
T PRK13684        293 EKDPVGEEVPSNF-----------YKI---VFLDPEKGFVL-GQRGVLLR  327 (334)
T ss_pred             eECCcCCCCCcce-----------EEE---EEeCCCceEEE-CCCceEEE
Confidence            4432211   123           455   77767666654 56777643

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=90.54  E-value=6.6  Score=30.30  Aligned_cols=67  Identities=10%  Similarity=0.034  Sum_probs=42.5

Q ss_pred             CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec---CCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN---KGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ...|+.|+. ..+..||+.....+..-+ -.+.|+++.+-.   ...-|+..+.+..|.-||.+-.+...+.
T Consensus        64 ~D~LliGt~-t~llaYDV~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV  133 (136)
T PF14781_consen   64 RDCLLIGTQ-TSLLAYDVENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV  133 (136)
T ss_pred             cCEEEEecc-ceEEEEEcccCchhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence            456777765 679999998766554333 336678777743   2234555556778888887655555443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=90.05  E-value=16  Score=34.02  Aligned_cols=59  Identities=12%  Similarity=0.059  Sum_probs=39.1

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK  345 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~  345 (537)
                      .+++..-..+.|....++........ ...+......+..+++.|||.++++...+|.|+
T Consensus       272 ~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  272 DLFVADYGGGRIWRLDLDEDGSVTEE-EEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEEETTTTEEEEEEEETTEEEEEE-EEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             cEEEecCCCCEEEEEeeecCCCccce-EEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence            45666666678888888655443222 223345555899999999999888888788774

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=89.70  E-value=1.2  Score=42.25  Aligned_cols=142  Identities=12%  Similarity=0.103  Sum_probs=82.4

Q ss_pred             CCcceEEE-ecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh
Q psy10942         14 ITSEFSVH-CGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ   92 (537)
Q Consensus        14 ~~~~~l~s-~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~   92 (537)
                      .|..+|+. +++...+.--|++.|+.+........+ .+  .+.|..--.+--....|+-.+..+..++=--..|..+..
T Consensus       477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vV--qy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v  553 (776)
T COG5167         477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VV--QYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV  553 (776)
T ss_pred             CCcceEEecCCCcccceeeecccceeeeEeecCCcc-ee--ecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence            34455544 455566888888889888877755554 22  234432111111334566666555444422223333332


Q ss_pred             cCCCcceEEEEEe----ccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         93 HGLSSPLVRIVRS----SVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        93 ~~~~~~v~~~~~s----~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      ....+.++.-.||    ....|+|+|+..|.|++||--.           ......+++....|..+..+ .++.++++.
T Consensus       554 ~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig-----------~rAKtalP~lG~aIk~idvt-a~Gk~ilaT  621 (776)
T COG5167         554 VESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIG-----------KRAKTALPGLGDAIKHIDVT-ANGKHILAT  621 (776)
T ss_pred             eeehhccccccccccccccCceEEEecCCCceeeehhhc-----------chhhhcCcccccceeeeEee-cCCcEEEEe
Confidence            2222333333333    2345999999999999999877           55566777777778888777 667776554


Q ss_pred             ee
Q psy10942        169 SN  170 (537)
Q Consensus       169 ~~  170 (537)
                      +.
T Consensus       622 Ck  623 (776)
T COG5167         622 CK  623 (776)
T ss_pred             ec
Confidence            43

>KOG1900|consensus

Probab=89.56  E-value=6.5  Score=42.36  Aligned_cols=69  Identities=16%  Similarity=0.234  Sum_probs=49.1

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEEC----CC---ce-----------------eeeEee-cCCcceEEEEEecCCCE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCL----TD---YV-----------------CLKSLE-GHDASVLRCHFINKGTQ  468 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~----~~---~~-----------------~~~~~~-~~~~~v~~~~~s~~~~~  468 (537)
                      .+.++....+|+.+.+|-. |  .+|.+    ..   ++                 .+..+. .+.++|..+......+.
T Consensus       180 ~V~~I~~t~nGRIF~~G~d-g--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~I  256 (1311)
T KOG1900|consen  180 SVNCITYTENGRIFFAGRD-G--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNI  256 (1311)
T ss_pred             eEEEEEeccCCcEEEeecC-C--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccce
Confidence            6778887888887777654 4  34433    11   00                 011223 46779999999998899


Q ss_pred             EEEEeCCCcEEEEECCC
Q psy10942        469 IVSTGADGLLKLWSIKT  485 (537)
Q Consensus       469 l~s~~~dg~v~vwd~~~  485 (537)
                      |.+-+..|+|++|++..
T Consensus       257 lY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  257 LYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             eeeeccCceEEEEEccC
Confidence            99999999999999965

>KOG1898|consensus

Probab=89.45  E-value=32  Score=36.53  Aligned_cols=84  Identities=13%  Similarity=0.199  Sum_probs=50.7

Q ss_pred             eeeeeeeeeccCCc----ceEEEecCcceEEEEEcCccceeeeec---cccccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942          3 FCVTCFDVIPQITS----EFSVHCGRDKVLFTWDLSSRKQLRSYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGE   75 (537)
Q Consensus         3 ~~V~~~~~~~~~~~----~~l~s~~~~g~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (537)
                      ..|.|+++.+.+.|    ++++.++.|+++++..+.-...+..+.   ...+..++.++-.+.. .-..-+..++.+|-.
T Consensus       583 ~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~ls~q~l~~~~~s~~iv~~~~~-~~~~~~~L~l~~GL~  661 (1205)
T KOG1898|consen  583 TDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQGLSSPPESLCIVEMEAT-GGTDVAQLYLLIGLR  661 (1205)
T ss_pred             eeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEccccccCCCccceEEEEeccc-CCccceeEEEEeccc
Confidence            46889999965533    579999999999999887655555443   4455566645444431 000001456777777


Q ss_pred             cceEEee--eccce
Q psy10942         76 KSLLHYY--ETSAV   87 (537)
Q Consensus        76 ~~~i~~w--d~~~~   87 (537)
                      +|.+.-.  |..+|
T Consensus       662 NGvllR~~id~v~G  675 (1205)
T KOG1898|consen  662 NGVLLRFVIDTVTG  675 (1205)
T ss_pred             ccEEEEEEeccccc
Confidence            7765433  33444

>KOG2280|consensus

Probab=89.41  E-value=27  Score=35.58  Aligned_cols=52  Identities=17%  Similarity=0.156  Sum_probs=38.6

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee--cCCcceEEEEEecCC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKG  466 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~  466 (537)
                      .+..+..||+.++|+--...|.|.+-+....+.+..+.  .|. +-..++|..+.
T Consensus       218 ~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~-~p~qm~Wcgnd  271 (829)
T KOG2280|consen  218 SVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHD-PPKQMAWCGND  271 (829)
T ss_pred             eEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCC-chHhceeecCC
Confidence            67889999999999999999999998887766665555  232 23367776554

>KOG2280|consensus

Probab=89.14  E-value=17  Score=36.84  Aligned_cols=40  Identities=18%  Similarity=0.209  Sum_probs=33.2

Q ss_pred             CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        454 DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      ...+..+..||+.++|+--..+|.|.+-+.+..+.+..+.
T Consensus       216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence            3567889999999999999999999999887776666654

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=88.99  E-value=1.7  Score=25.53  Aligned_cols=38  Identities=8%  Similarity=-0.074  Sum_probs=27.2

Q ss_pred             CCcceEEEe-cCcceEEEEEcCccceeeeecccccccee
Q psy10942         14 ITSEFSVHC-GRDKVLFTWDLSSRKQLRSYPAYESLETC   51 (537)
Q Consensus        14 ~~~~~l~s~-~~~g~v~iwd~~~~~~~~~~~~~~~~~~~   51 (537)
                      |++++|+++ ..++.|.++|..+++.+..++..+....+
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i   39 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGV   39 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceE
Confidence            456666665 45788999999999999888765444443

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=88.88  E-value=2.7  Score=24.59  Aligned_cols=40  Identities=10%  Similarity=0.087  Sum_probs=27.5

Q ss_pred             CCCCEEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942        422 PLDRILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       422 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~  462 (537)
                      |++++|+++. .++.|.++|..+++.+..+... .....++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence            4666666654 5789999999998888887753 33345544

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=88.72  E-value=4.1  Score=38.90  Aligned_cols=139  Identities=13%  Similarity=0.062  Sum_probs=88.8

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEecccc--------EEEEEeCCceEEEEecccccCccccccccc
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKR--------MYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~--------~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                      .++..++....++--|++-|+.+.....++.+ -+.|.|+.+        .|+ |-++..|.-.|..-.          +
T Consensus       481 li~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~----------g  548 (776)
T COG5167         481 LIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRAR----------G  548 (776)
T ss_pred             eEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEE-eecccceEEeccccc----------C
Confidence            34455677777888899999999999988877 788887542        343 444455554555432          2


Q ss_pred             ceeEEeecchhhhhhhhccc---CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--c
Q psy10942        140 KFRKQFVGFSDEILDIALLG---EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--K  214 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l  214 (537)
                      ..+.... ..+.++.-.|+.   ...+++++++..++    |                 ++||.       -..+..  +
T Consensus       549 NKi~v~e-sKdY~tKn~Fss~~tTesGyIa~as~kGD----i-----------------rLyDR-------ig~rAKtal  599 (776)
T COG5167         549 NKIKVVE-SKDYKTKNKFSSGMTTESGYIAAASRKGD----I-----------------RLYDR-------IGKRAKTAL  599 (776)
T ss_pred             Cceeeee-ehhccccccccccccccCceEEEecCCCc----e-----------------eeehh-------hcchhhhcC
Confidence            2121111 111222222321   35779999999888    9                 99997       333333  6


Q ss_pred             cccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccccc
Q psy10942        215 HNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRK  260 (537)
Q Consensus       215 ~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~  260 (537)
                      +     +.  ...|..+   ..+.+|+++++.+.. .+.  +-++.
T Consensus       600 P-----~l--G~aIk~i---dvta~Gk~ilaTCk~-yll--L~d~~  632 (776)
T COG5167         600 P-----GL--GDAIKHI---DVTANGKHILATCKN-YLL--LTDVP  632 (776)
T ss_pred             c-----cc--ccceeee---EeecCCcEEEEeecc-eEE--EEecc
Confidence            6     77  8889999   999999988877764 344  44544

>KOG1983|consensus

Probab=88.50  E-value=12  Score=40.51  Aligned_cols=26  Identities=23%  Similarity=0.532  Sum_probs=24.0

Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      ++++..++++..||.+.+||...+..
T Consensus       243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~  268 (993)
T KOG1983|consen  243 SRDGSHFVSYHTDGSYAFWDVSSGKL  268 (993)
T ss_pred             ccCCceEEEEEecCCEEeeecCCCce
Confidence            78899999999999999999988866

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=88.02  E-value=37  Score=35.44  Aligned_cols=30  Identities=27%  Similarity=0.498  Sum_probs=25.6

Q ss_pred             eeeEEEEcCC---CCEEEEEeCCCcEEEEECCC
Q psy10942        414 GVWFVNFSPL---DRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       414 ~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~  443 (537)
                      .|..+.|+|.   +..|++-..|+.+++||+..
T Consensus       148 ~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  148 EIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD  180 (717)
T ss_pred             eEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence            6778888886   57888889999999999975

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=87.81  E-value=2.8  Score=42.43  Aligned_cols=73  Identities=18%  Similarity=0.248  Sum_probs=44.6

Q ss_pred             CCCCEEEEEeCCCcEEEEECCC----ceeeeEe-----------ec-----------CCcceEEEEEec----CCCEEEE
Q psy10942        422 PLDRILISSSGDATIKLWCLTD----YVCLKSL-----------EG-----------HDASVLRCHFIN----KGTQIVS  471 (537)
Q Consensus       422 ~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~-----------~~-----------~~~~v~~~~~s~----~~~~l~s  471 (537)
                      ++...++.+..||.+.......    +......           .+           ....+..++.+.    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4556777778888887776553    1111111           00           112345566666    6789999


Q ss_pred             EeCCCcEEEEECCCCeeEEEecC
Q psy10942        472 TGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      .+.|+.+|+||+.+++++.....
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~~~  258 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATIDL  258 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEEET
T ss_pred             EeCCCeEEEEECCCCeEEEEecc
Confidence            99999999999999999776543

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=87.58  E-value=24  Score=32.83  Aligned_cols=161  Identities=11%  Similarity=0.087  Sum_probs=81.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCc------EEEEEccCCc---eeeE-----------------------EEEecCCCCE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKT------VKVWSTTGGL---KLLN-----------------------VLRGHKKGTQ  367 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~------i~i~d~~~~~---~~~~-----------------------~~~~~~~~~~  367 (537)
                      -+.+..+.+.|++..+++.+.+|.      +..+++....   ..+.                       .+....++.+
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            356788888876666777777777      6555554200   0000                       1111223455


Q ss_pred             EEEEcCC------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-----CC--
Q psy10942        368 IVSTGAD------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-----DA--  434 (537)
Q Consensus       368 l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----dg--  434 (537)
                      +++.-.+      ..|..++.. ++....+..+.......  ......-...+..+++++|+|+.|+++.+     |+  
T Consensus        99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~--~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~  175 (326)
T PF13449_consen   99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDA--NGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPR  175 (326)
T ss_pred             EEEeCCccCCCCCCEEEEECCC-CcccceEcccccccccc--CccccccCCCCeEEEEECCCCCEEEEEECccccCCCcc
Confidence            5555555      566666655 55444442211100000  00001111127889999999996666543     22  


Q ss_pred             c-------EEEE--ECCC-cee----eeEeec-----CCcceEEEEEecCCCEEEEEe-----CCCcEEEEEC
Q psy10942        435 T-------IKLW--CLTD-YVC----LKSLEG-----HDASVLRCHFINKGTQIVSTG-----ADGLLKLWSI  483 (537)
Q Consensus       435 ~-------i~i~--d~~~-~~~----~~~~~~-----~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~  483 (537)
                      .       ++++  |..+ ++.    ...+..     ....|..+.+-+++++|+.-=     ....++|+.+
T Consensus       176 ~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v  248 (326)
T PF13449_consen  176 ANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRV  248 (326)
T ss_pred             cccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEE
Confidence            1       4444  5443 222    222222     345688999999998776432     2344555544

>KOG3630|consensus

Probab=87.02  E-value=2.9  Score=44.02  Aligned_cols=108  Identities=12%  Similarity=-0.017  Sum_probs=65.5

Q ss_pred             eeeEEEEcCCCCEEEEEe--CCCcEEEEECCCcee-----eeEeecC------CcceEEEEEecCCC-EEEEEeCCCcEE
Q psy10942        414 GVWFVNFSPLDRILISSS--GDATIKLWCLTDYVC-----LKSLEGH------DASVLRCHFINKGT-QIVSTGADGLLK  479 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~-----~~~~~~~------~~~v~~~~~s~~~~-~l~s~~~dg~v~  479 (537)
                      .+..+...+|+...++..  .+-.|..||+++...     ...+..|      ..-..++.|.|.-. ..+....|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            566666777766555443  334788899876321     1222222      22356778888533 345666788898


Q ss_pred             EEECCCCeeE-EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        480 LWSIKTSTCV-STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       480 vwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +..+..-... ..+ .-....           +++   +|+|.|+.++.|-..|++.-
T Consensus       182 V~~~~~~~~~v~s~-p~t~~~-----------Tav---~WSprGKQl~iG~nnGt~vQ  224 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTSF-PVTNSQ-----------TAV---LWSPRGKQLFIGRNNGTEVQ  224 (1405)
T ss_pred             hhhhhhhhhhhccc-Ccccce-----------eeE---EeccccceeeEecCCCeEEE
Confidence            8876432211 111 112233           677   99999999999998888754

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=85.87  E-value=10  Score=31.82  Aligned_cols=102  Identities=10%  Similarity=0.086  Sum_probs=65.5

Q ss_pred             CcceEEEecC--cceEEEEEcCccceeeeeccc-cccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh
Q psy10942         15 TSEFSVHCGR--DKVLFTWDLSSRKQLRSYPAY-ESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY   91 (537)
Q Consensus        15 ~~~~l~s~~~--~g~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~   91 (537)
                      ++.++.+.|.  ...|++||+.+|+.+...+.. ..+-.=++.-+.        +.-+.++- .+|.-..+|..+.+++.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~g--------d~~y~LTw-~egvaf~~d~~t~~~lg  125 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLG--------DYFYQLTW-KEGVAFKYDADTLEELG  125 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeecc--------ceEEEEEe-ccceeEEEChHHhhhhc
Confidence            5677777765  345999999999998866533 111111122222        43444444 48888999999999998


Q ss_pred             hcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         92 QHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        92 ~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      ++...+.=..++  .|++.|..+....++++-|.++
T Consensus       126 ~~~y~GeGWgLt--~d~~~LimsdGsatL~frdP~t  159 (262)
T COG3823         126 RFSYEGEGWGLT--SDDKNLIMSDGSATLQFRDPKT  159 (262)
T ss_pred             ccccCCcceeee--cCCcceEeeCCceEEEecCHHH
Confidence            888776555443  4555566665555666666666

>PHA02790 Kelch-like protein; Provisional

Probab=85.79  E-value=39  Score=33.52  Aligned_cols=60  Identities=8%  Similarity=-0.015  Sum_probs=30.7

Q ss_pred             CCCEEEEEeCCC---cEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        423 LDRILISSSGDA---TIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       423 ~~~~l~~~~~dg---~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      +|++.+.|+.++   .+..||..+.+-..  .+......  ..+..-++++.+.|+   .+.+||.++++
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~--~~~~~~~~~IYv~GG---~~e~ydp~~~~  426 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK--SCALVFGRRLFLVGR---NAEFYCESSNT  426 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc--ceEEEECCEEEEECC---ceEEecCCCCc
Confidence            566667776543   46778876643222  11111111  112233555556653   56788886653

>KOG3616|consensus

Probab=85.73  E-value=34  Score=34.77  Aligned_cols=67  Identities=9%  Similarity=0.042  Sum_probs=45.8

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      +.++++.-+  |.+..++.+..||.|++++.....+.+.-....|-..+  ++...          -++++.+|..+--|
T Consensus        15 e~~~aiqsh--p~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nl--v~tnh----------gl~~~tsdrr~la~   80 (1636)
T KOG3616|consen   15 EFTTAIQSH--PGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENL--VFTNH----------GLVTATSDRRALAW   80 (1636)
T ss_pred             ceeeeeeec--CCCceEEEEecCCcEEEEeecccchhhhhhhcCCccce--eeecc----------ceEEEeccchhhee
Confidence            457788888  89999999999999999998776654433333444555  43442          25666666666666


Q ss_pred             e
Q psy10942         83 E   83 (537)
Q Consensus        83 d   83 (537)
                      .
T Consensus        81 ~   81 (1636)
T KOG3616|consen   81 K   81 (1636)
T ss_pred             e
Confidence            5

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=85.55  E-value=4.8  Score=23.15  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=19.6

Q ss_pred             CCcceEEEEEecCCCEEEEEeC-C--CcEEEE
Q psy10942        453 HDASVLRCHFINKGTQIVSTGA-D--GLLKLW  481 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~~l~s~~~-d--g~v~vw  481 (537)
                      ....-....|||||+.|+-++. +  |.-.||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            4456778999999998886554 4  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=85.53  E-value=25  Score=31.04  Aligned_cols=156  Identities=8%  Similarity=0.037  Sum_probs=85.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      -..++-.|||..-+++...+.|--.|.. +++....--+.....+.+..+.||...+-|.  +.-+..+......+....
T Consensus        64 p~dvapapdG~VWft~qg~gaiGhLdP~-tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~--~~aI~R~dpkt~evt~f~  140 (353)
T COG4257          64 PFDVAPAPDGAVWFTAQGTGAIGHLDPA-TGEVETYPLGSGASPHGIVVGPDGSAWITDT--GLAIGRLDPKTLEVTRFP  140 (353)
T ss_pred             ccccccCCCCceEEecCccccceecCCC-CCceEEEecCCCCCCceEEECCCCCeeEecC--cceeEEecCcccceEEee
Confidence            3567778888888887777777777776 3333332222233334455555655444443  224444444333333332


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                      +.-+   ...+......|++.|++.+++.. |.---.|-.. ..+..+.. ....-+.|+..|||...++.-.++.|-..
T Consensus       141 lp~~---~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiari  215 (353)
T COG4257         141 LPLE---HADANLETAVFDPWGNLWFTGQI-GAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARI  215 (353)
T ss_pred             cccc---cCCCcccceeeCCCccEEEeecc-ccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEc
Confidence            2211   11126778889999999888763 2111111111 12222222 22345778889999888877677777777


Q ss_pred             ECCCC
Q psy10942        482 SIKTS  486 (537)
Q Consensus       482 d~~~~  486 (537)
                      |..++
T Consensus       216 dp~~~  220 (353)
T COG4257         216 DPFAG  220 (353)
T ss_pred             ccccC
Confidence            76665

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=85.15  E-value=2.9  Score=35.31  Aligned_cols=43  Identities=9%  Similarity=0.141  Sum_probs=34.1

Q ss_pred             CccceEEeeecc--ceehhhhcCCCcceEEEEEeccccEEEEEeC
Q psy10942         74 GEKSLLHYYETS--AVKELYQHGLSSPLVRIVRSSVKRMYAVVTA  116 (537)
Q Consensus        74 ~~~~~i~~wd~~--~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~  116 (537)
                      .....|.+|++.  ..+.+.++..-+.|..++++..|+||++-=.
T Consensus        35 ~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   35 ASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             cCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEe
Confidence            445679999988  3445666666689999999999999998644

>KOG4460|consensus

Probab=84.64  E-value=11  Score=36.44  Aligned_cols=96  Identities=18%  Similarity=0.153  Sum_probs=57.5

Q ss_pred             CceeeeeeeeeccCCcceEEEecCcceEEEEEcC-ccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          1 VKFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLS-SRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         1 ~~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      |.|-|..+..+  +.|..++-.|.+| |.|..+. ..-.-..+...++...|  ...+-       + ..+++.+     
T Consensus       102 V~feV~~vl~s--~~GS~VaL~G~~G-i~vMeLp~rwG~~s~~eDgk~~v~C--Rt~~i-------~-~~~ftss-----  163 (741)
T KOG4460|consen  102 VLFEVYQVLLS--PTGSHVALIGIKG-LMVMELPKRWGKNSEFEDGKSTVNC--RTTPV-------A-ERFFTSS-----  163 (741)
T ss_pred             ceEEEEEEEec--CCCceEEEecCCe-eEEEEchhhcCccceecCCCceEEE--Eeecc-------c-ceeeccC-----
Confidence            46778888888  8888888888888 5555442 22222233333333334  22331       1 1222222     


Q ss_pred             EeeeccceehhhhcCCCcceEEEEEeccc---cEEEEEeCCceEEEEeccccc
Q psy10942         80 HYYETSAVKELYQHGLSSPLVRIVRSSVK---RMYAVVTADHNISLYRLNSET  129 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~~~v~~~~~s~~~---~~la~~~~d~~i~iwd~~~~~  129 (537)
                                     .+-.+..++|.|+.   ..|..-++|+.||+||+...+
T Consensus       164 ---------------~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~t  201 (741)
T KOG4460|consen  164 ---------------TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPT  201 (741)
T ss_pred             ---------------CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcc
Confidence                           11246677888875   567777889999999998843

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=84.58  E-value=36  Score=32.37  Aligned_cols=70  Identities=14%  Similarity=0.045  Sum_probs=46.8

Q ss_pred             CCCEEEEEeCCCcEEEEECCCceeeeEeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      +|+ ++.++.++.++.+|..+++.+....... ..+.......++ .+...+.++.+.-.+..+|+.+.....
T Consensus       111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~  181 (370)
T COG1520         111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYET  181 (370)
T ss_pred             CCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEec
Confidence            555 7778888989999998999988887655 112222222243 344444678888888888887766543

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=84.18  E-value=15  Score=34.80  Aligned_cols=68  Identities=15%  Similarity=0.013  Sum_probs=40.0

Q ss_pred             eeeEEEEcCCCCEEEEEe-----------CCC-cEEEEECCC--ce--eeeEeecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942        414 GVWFVNFSPLDRILISSS-----------GDA-TIKLWCLTD--YV--CLKSLEGHDASVLRCHFINKGTQIVSTGADGL  477 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~-----------~dg-~i~i~d~~~--~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  477 (537)
                      ....|+|.++|+++++-.           ..+ .|.+++-.+  ++  ....+.........+++.+++ +++ +.....
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i   92 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPDI   92 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCeE
Confidence            567789999999877643           223 677776543  22  223343333456889999998 444 444443


Q ss_pred             EEEEEC
Q psy10942        478 LKLWSI  483 (537)
Q Consensus       478 v~vwd~  483 (537)
                      .++.+.
T Consensus        93 ~~~~d~   98 (367)
T TIGR02604        93 LFLRDK   98 (367)
T ss_pred             EEEeCC
Confidence            334344

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=83.41  E-value=6.5  Score=37.03  Aligned_cols=105  Identities=14%  Similarity=0.128  Sum_probs=70.9

Q ss_pred             CCcceEEEecCcceEEEE-EcCcccee-----eeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce
Q psy10942         14 ITSEFSVHCGRDKVLFTW-DLSSRKQL-----RSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV   87 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iw-d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~   87 (537)
                      ..|..|+.+.+||.|.-| |...+...     +.++ ..+.+ ++ ...|++      +.+-++.-..+|.+.++...+.
T Consensus       278 ~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~-l~pa~-~~-~l~pe~------~rkgF~~l~~~G~L~~f~st~~  348 (733)
T COG4590         278 SGGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFK-LAPAE-VQ-FLLPET------NRKGFYSLYRNGTLQSFYSTSE  348 (733)
T ss_pred             hCceeEEEEcCCCceeeeeeeecCCCCcceeeeccc-cCccc-ce-eecccc------ccceEEEEcCCCceeeeecccC
Confidence            456678889999999887 55443221     1111 11111 11 234543      6677888999999999887766


Q ss_pred             ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccc
Q psy10942         88 KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSE  128 (537)
Q Consensus        88 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~  128 (537)
                      +.+.....-+.+.-+++||.+.+|++-. .|.++++.+++.
T Consensus       349 ~~lL~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr  388 (733)
T COG4590         349 KLLLFERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLENR  388 (733)
T ss_pred             cceehhhhhcCcceeeeCcccchheeec-CCceEEEEecCC
Confidence            6655555456788899999999998754 477999998873

>KOG2247|consensus

Probab=82.84  E-value=0.1  Score=48.86  Aligned_cols=144  Identities=14%  Similarity=0.157  Sum_probs=93.7

Q ss_pred             ceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEE-EeCCceEEEEeccc
Q psy10942         49 ETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAV-VTADHNISLYRLNS  127 (537)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~  127 (537)
                      ..+.+.+.|.       +.. ++.++.+..+..|| ..++.......++....|+|..++..+++ +-..+.+.+||+.+
T Consensus        36 ~pi~~~w~~e-------~~n-lavaca~tiv~~YD-~agq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~  106 (615)
T KOG2247|consen   36 GPIIHRWRPE-------GHN-LAVACANTIVIYYD-KAGQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNS  106 (615)
T ss_pred             ccceeeEecC-------CCc-eehhhhhhHHHhhh-hhcceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhh
Confidence            3444556664       434 77788899999999 45666667777788889999888887554 44567899999987


Q ss_pred             ccCcccccccccceeEEee-cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhh
Q psy10942        128 ETGLEERPNKILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKF  206 (537)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~  206 (537)
                      .           . ..++. +....-.-+.|+ +....++.+...+.    +                 .+++.      
T Consensus       107 e-----------y-tqqLE~gg~~s~sll~ws-Kg~~el~ig~~~gn----~-----------------viynh------  146 (615)
T KOG2247|consen  107 E-----------Y-TQQLESGGTSSKSLLAWS-KGTPELVIGNNAGN----I-----------------VIYNH------  146 (615)
T ss_pred             h-----------h-HHHHhccCcchHHHHhhc-cCCccccccccccc----e-----------------EEEec------
Confidence            3           1 11221 111112226788 66666666654444    7                 77776      


Q ss_pred             ccccccc-cccccccc-CCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        207 KQSSSQQ-KHNTERLG-RDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       207 ~~~~~~~-l~~~~~~~-h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                       .+.+.. ..     | |  ...+.++   ++.+.+ +.+.++.|..+.
T Consensus       147 -gtsR~iiv~-----Gkh--~RRgtq~---av~lEd-~vil~dcd~~L~  183 (615)
T KOG2247|consen  147 -GTSRRIIVM-----GKH--QRRGTQI---AVTLED-YVILCDCDNTLS  183 (615)
T ss_pred             -cchhhhhhh-----ccc--ccceeEE---Eecccc-eeeecCcHHHHH
Confidence             555444 44     5 8  8999999   898887 445555555554

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=82.39  E-value=16  Score=30.19  Aligned_cols=30  Identities=17%  Similarity=0.226  Sum_probs=22.7

Q ss_pred             eeeEEEEcCCC------CEEEEEeCCCcEEEEECCC
Q psy10942        414 GVWFVNFSPLD------RILISSSGDATIKLWCLTD  443 (537)
Q Consensus       414 ~i~~~~~s~~~------~~l~~~~~dg~i~i~d~~~  443 (537)
                      .+..++|||.|      -+|++-..++.|.||....
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            56677777743      3788888999999997653

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=82.20  E-value=55  Score=32.36  Aligned_cols=372  Identities=9%  Similarity=0.014  Sum_probs=0.0

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH   93 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~   93 (537)
                      .+..++-...++.-|-.-|......++.......-..+......        -...+.+++.|| +..||..+++.++..
T Consensus       130 ddaqllw~~~~~~gV~~~d~lg~~~v~~~r~ll~d~~V~aLv~D--------~~g~lWvgT~dG-L~~fd~~~gkalql~  200 (671)
T COG3292         130 DDAQLLWLHASVIGVDSADALGREAVKDVRPLLKDTPVVALVFD--------ANGRLWVGTPDG-LSYFDAGRGKALQLA  200 (671)
T ss_pred             chhhhhhhccccCCccccccchhhhccCccccccCccceeeeee--------ccCcEEEecCCc-ceEEccccceEEEcC


Q ss_pred             CCC--cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         94 GLS--SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        94 ~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      ..+  .+|..+..+-.| .|.+|+.+| +.+.+..+           .+..............+.-. +....+.+++..
T Consensus       201 s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G-----------~~~sn~~~~lp~~~I~ll~q-D~qG~lWiGTen  266 (671)
T COG3292         201 SPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEG-----------WRASNWGPMLPSGNILLLVQ-DAQGELWIGTEN  266 (671)
T ss_pred             CCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhh-----------ccccccCCCCcchheeeeec-ccCCCEEEeecc


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCc
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPS  251 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~  251 (537)
                      +     +                 .....       +.....+......-.  ...|.++   ....+| -+-+++.++.
T Consensus       267 G-----l-----------------~r~~l-------~rq~Lq~~~~~~~l~--~S~vnsL---~~D~dG-sLWv~t~~gi  311 (671)
T COG3292         267 G-----L-----------------WRTRL-------PRQGLQIPLSKMHLG--VSTVNSL---WLDTDG-SLWVGTYGGI  311 (671)
T ss_pred             c-----c-----------------eeEec-------CCCCccccccccCCc--cccccce---eeccCC-CEeeeccCce


Q ss_pred             ceeccccccCCCcccccccccccceeeeeeCCcc-------------eEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        252 TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-------------ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       252 i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++  +-.-+-            ............             ..+--...-|.+.+-+-.++...    ......
T Consensus       312 v~--~~~a~w------------~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v----~sv~q~  373 (671)
T COG3292         312 VR--YLTADW------------KRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELV----RSVHQL  373 (671)
T ss_pred             EE--Eecchh------------hheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEE----EEeeec


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-----------CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG-----------GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~-----------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      ....|+.+.+.. +..+-.++...-+..|+...           ....+..+-..++++ +..++.+|-++. +.+.++.
T Consensus       374 Rg~nit~~~~d~-~g~lWlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~-~pe~~~v  450 (671)
T COG3292         374 RGMNITTTLEDS-RGRLWLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR-DPESGRV  450 (671)
T ss_pred             cccccchhhhcc-CCcEEEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec-Cccccch


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~  467 (537)
                      ...+.........-            .+..+.+.|+|++-+..+.  .|..|+.........+......-+.. +--.+.
T Consensus       451 ~n~ln~~~~~l~~s------------~~~~lg~~~~g~Lw~a~g~--gva~~~sq~~~~~~~l~~~~q~qy~f-~~~~~d  515 (671)
T COG3292         451 LNLLNPGSHGLDGS------------RVEQLGLGPDGRLWLAAGS--GVAAWESQRRMFVPILDLTGQRQYSF-VPVGGD  515 (671)
T ss_pred             hcccccccCcCCcc------------hhhhhccCCCCceEEEecc--eeeeeccccceecccccccceeeEEE-EEccCc


Q ss_pred             EEEEEeCCCcEE
Q psy10942        468 QIVSTGADGLLK  479 (537)
Q Consensus       468 ~l~s~~~dg~v~  479 (537)
                      ++..+-.-|.++
T Consensus       516 ~vw~~~~Rg~vr  527 (671)
T COG3292         516 EVWVHRLRGLVR  527 (671)
T ss_pred             eEeeeeeceeee

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=81.49  E-value=42  Score=30.53  Aligned_cols=116  Identities=11%  Similarity=0.096  Sum_probs=64.5

Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceE-EEEEecCCCce-EEeeeeEEEEcC---CCCEEEEEeCCCcEEEEECCC
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIW-TLAITKDENQI-ITGGVWFVNFSP---LDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~-~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~  443 (537)
                      ++-...+-+.++|+.+++.-+....+...-. ...+.-.+..+ ...++..++.+|   +++.|....-.+ -++|.+++
T Consensus        82 ItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T  160 (287)
T PF03022_consen   82 ITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPT  160 (287)
T ss_dssp             EEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEH
T ss_pred             EeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEH
Confidence            3444456899999999987666654332221 01111122111 112467777766   777888776543 23443322


Q ss_pred             -----c---------eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        444 -----Y---------VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       444 -----~---------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                           .         +.+..+-........++++++|.++++--..+.|..|+..+
T Consensus       161 ~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~  216 (287)
T PF03022_consen  161 SVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDG  216 (287)
T ss_dssp             HHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTT
T ss_pred             HHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCC
Confidence                 0         11122211123566789999999888988999999999875

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=81.46  E-value=77  Score=33.59  Aligned_cols=68  Identities=19%  Similarity=0.131  Sum_probs=51.3

Q ss_pred             EeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe----ec---------------CCcceEEEEEecCCCEEEEE
Q psy10942        412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL----EG---------------HDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~---------------~~~~v~~~~~s~~~~~l~s~  472 (537)
                      .+.|.+++...-+.+++....||+|.++|-.+.+.+...    ..               +...+..++|||.+.-++.-
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~  338 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI  338 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence            346888888888889999999999999998876554443    10               11133458899999999998


Q ss_pred             eCCCcEE
Q psy10942        473 GADGLLK  479 (537)
Q Consensus       473 ~~dg~v~  479 (537)
                      ..+|.+.
T Consensus       339 ~~~~~~~  345 (753)
T PF11635_consen  339 DEDGKTK  345 (753)
T ss_pred             ecCCCce
Confidence            8888865

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>KOG0783|consensus

Probab=81.06  E-value=58  Score=33.81  Aligned_cols=194  Identities=12%  Similarity=0.071  Sum_probs=93.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe-----------------c------CCCCEEEEEcCCCcEE
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG-----------------H------KKGTQIVSTGADGLLK  378 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------~------~~~~~l~~~~~d~~i~  378 (537)
                      .|.+++.+.+..++++  .+|.|+-|-++... .+.....                 .      ..|..--.+-.+..|+
T Consensus       230 ~~~qisvs~~HslvLT--~~g~Vys~GlN~~h-qLG~~~~~~~~~~p~qI~a~r~kg~~~iIgvaAg~~hsVawt~~~VY  306 (1267)
T KOG0783|consen  230 KVIQISVSHTHSLVLT--KFGSVYSWGLNGSH-QLGLSNDELKKDDPIQITARRIKGFKQIIGVAAGKSHSVAWTDTDVY  306 (1267)
T ss_pred             ceEEEEeecceeEEEe--ecceEEEeecCccc-ccCCcCchhhcCchhhhhhHhhcchhhhhhhhcccceeeeeecceEE
Confidence            4788888877665554  78999999877321 1111110                 0      0133333444567799


Q ss_pred             EEECCCCeeeeeeccCCcceEEE-EEecCCCc---eEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTL-AITKDENQ---IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                      .|-++.|+.-  +..+...|+.. +..+-...   ++...--.+++...+..++.+.......-.+....+.+....+|-
T Consensus       307 ~wGlN~GQlG--i~~n~~~Vt~Pr~l~~~~~~v~~v~a~~~ATVc~~~~~~i~~~ady~~~k~~~n~~~lks~~V~gg~l  384 (1267)
T KOG0783|consen  307 SWGLNNGQLG--ISDNISVVTTPRRLAGLLSPVIHVVATTRATVCLLQNNSIIAFADYNQVKLPFNVDFLKSLKVTGGPL  384 (1267)
T ss_pred             EecccCceec--CCCCCceeecchhhcccccceEEEEecCccEEEEecCCcEEEEecccceecCcchhccceeEEecCcc
Confidence            9999888753  22222222111 11111000   000111223444455555555555444444555555555554443


Q ss_pred             cceE-EE-EEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942        455 ASVL-RC-HFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       455 ~~v~-~~-~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                      ..-+ .+ .-......|+.-..-|.|+.|+-.+... ...+-..-.+.        ....+   +|..  +.|+.++.||
T Consensus       385 ~~~~~~~~k~~a~~~kll~lte~g~Vy~w~s~ns~~-~~c~ftp~r~~--------~isdI---a~~~--N~~~~~t~dG  450 (1267)
T KOG0783|consen  385 SLTRFNVRKLLASENKLLVLTELGEVYEWDSKNSTR-TSCKFTPLRIF--------EISDI---AWTA--NSLILCTRDG  450 (1267)
T ss_pred             chhhhhhhhcchhhhheeeeccCCeEEEEecCCCce-eeeecccceee--------ehhhh---hhcc--ceEEEEecCc
Confidence            2211 00 0111233566667788999999655432 22222222220        00344   7766  4455566787


Q ss_pred             CE
Q psy10942        533 QV  534 (537)
Q Consensus       533 ~i  534 (537)
                      ..
T Consensus       451 c~  452 (1267)
T KOG0783|consen  451 CW  452 (1267)
T ss_pred             ce
Confidence            54

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	537
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-20
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-11
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-20
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-11
2h9l_A	329	Wdr5delta23 Length = 329		2e-20
2h9l_A	329	Wdr5delta23 Length = 329		1e-11
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		2e-20
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-11
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-20
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-11
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-20
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-11
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		3e-20
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		3e-11
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		3e-20
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-11
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		3e-20
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-11
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		3e-20
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-11
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		3e-20
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-11
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		3e-20
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-11
2g99_A	308	Structural Basis For The Specific Recognition Of Me		3e-20
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-11
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-20
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-11
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		4e-20
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-11
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		6e-20
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-12
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		7e-20
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-11
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-19
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-19
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-11
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		5e-17
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		5e-12
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		4e-14
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		2e-13
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		7e-07
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		3e-04
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		4e-13
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		4e-13
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		5e-13
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		5e-13
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		5e-12
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-04
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		5e-12
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		5e-12
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-04
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		4e-11
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		6e-11
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		6e-11
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		7e-11
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		7e-11
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		8e-11
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		9e-11
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-10
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-09
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		1e-08
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		2e-08
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		2e-08
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-08
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		7e-08
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		8e-08
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		1e-07
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		1e-07
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		5e-07
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		5e-07
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		6e-07
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-04
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		6e-07
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-04
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		7e-07
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-04
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		7e-07
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		9e-07
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		2e-04
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		9e-07
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		2e-04
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		2e-06
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		4e-06
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-04
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		9e-06
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		3e-05
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		6e-05
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		5e-04
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		7e-04

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 100 NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 155 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 208
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 209 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 258 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 43  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 100
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 101 ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHS 171

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 102 NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 156
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 157 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 210
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 211 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 259
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 260 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 302

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 45  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 102
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 103 ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 147
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 148 SGSFDESVRIWDVKTGKCLKTLPAHS 173

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 95  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 149
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 150 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 203
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 204 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 252
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 253 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 295

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 38  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 95
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 96  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 140
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 141 SGSFDESVRIWDVKTGKCLKTLPAHS 166

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 81  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 136 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 189
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 190 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 238
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 239 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
            G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N 
Sbjct: 23  AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN- 81
Query: 410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI 469
                           +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   I
Sbjct: 82  ----------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 125
Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHA 496
           VS   D  +++W +KT  C+ T   H+
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHS 152

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 81  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 136 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 189
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 190 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 238
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 239 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
            G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N 
Sbjct: 23  AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN- 81
Query: 410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI 469
                           +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   I
Sbjct: 82  ----------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 125
Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHA 496
           VS   D  +++W +KT  C+ T   H+
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHS 152

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 84  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 139 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 192
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 193 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 241
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 242 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 27  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 84
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 85  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 129
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 130 SGSFDESVRIWDVKTGKCLKTLPAHS 155

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 81  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 136 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 189
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 190 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 238
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 239 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
            G  K ++ ++    G  + ++ AD L+K+W         T   H L I  +A + D N 
Sbjct: 23  AGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN- 81
Query: 410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI 469
                           +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   I
Sbjct: 82  ----------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 125
Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHA 496
           VS   D  +++W +KT  C+ T   H+
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHS 152

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 84  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 139 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 192
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 193 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 241
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 242 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 27  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 84
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 85  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 129
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 130 SGSFDESVRIWDVKTGKCLKTLPAHS 155

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 83  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 137
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 138 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 191
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 192 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 240
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 241 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 283

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 26  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 83
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 84  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 128
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 129 SGSFDESVRIWDVKTGKCLKTLPAHS 154

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 79  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 133
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 134 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 187
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 188 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 236
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 237 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 279

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 22  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 79
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 80  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 124
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 125 SGSFDESVRIWDVKTGKCLKTLPAHS 150

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 78  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 132
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 133 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 186
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 187 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 235
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 236 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 21  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 78
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 79  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 123
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 124 SGSFDESVRIWDVKTGKCLKTLPAHS 149

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 84  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 139 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 192
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 193 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 241
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 242 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 27  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 84
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 85  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 129
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 130 SGSFDESVRIWDVKTGKCLKTLPAHS 155

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 74  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 129 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 182
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 183 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 231
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 232 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 274

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 17  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 74
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 75  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 119
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 120 SGSFDESVRIWDVKTGKCLKTLPAHS 145

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 77  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 131
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 132 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 185
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 186 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 233
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           +   C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 234 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 277

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 20  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 77
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 78  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 122
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 123 SGSFDESVRIWDVKTGKCLKTLPAHS 148

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 78  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 132
Query: 346 VWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           +W    G K L  L  H          + G+ IVS+  DGL ++W   +  C+ T     
Sbjct: 133 IWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 186
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
                  +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  
Sbjct: 187 -------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 235
Query: 456 SVLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               C F N     G  IVS   D L+ +W+++T   V     H
Sbjct: 236 EKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 21  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 78
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 79  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 123
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 124 SGSFDESVRIWDVKTGKCLKTLPAHS 149

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 146/357 (40%), Gaps = 49/357 (13%)
Query: 181 LVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE-----RLGRDELKTVTLLERGK 235
           + K  A    NE  DK +  +LE K+      QK   E        ++E  +   L + +
Sbjct: 30  VFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKR 89
Query: 236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAF----YTGGTVE----- 286
             KE    P +    S       R  +H P+F + V  +E        Y  G  E     
Sbjct: 90  DPKEWIPRPPEKYALSGHRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 287 ---------------LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN 331
                          LLAS S D T+K+W   G  + +  + GH    + +++ V++ PN
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG-FECIRTMHGH----DHNVSSVSIMPN 203
Query: 332 DKLLASGSLDKTVKVWST---------TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI 382
              + S S DKT+K+W           TG  + + ++R ++ GT I S   D  +++W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 383 KTSTCVSTFDKHALKI----WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
            T  C +   +H   +    W    +       TG     +  P    L+S S D TIK+
Sbjct: 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKM 322
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           W ++  +CL +L GHD  V    F + G  I+S   D  L++W  K   C+ T + H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL 427
           +VS   D  +K+W  +T     T   H                 T  V  ++F    ++L
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGH-----------------TDSVQDISFDHSGKLL 165
Query: 428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
            S S D TIKLW    + C++++ GHD +V     +  G  IVS   D  +K+W ++T  
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 488 CVSTFDKHALKIR 500
           CV TF  H   +R
Sbjct: 226 CVKTFTGHREWVR 238

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 81  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 346 VWSTTGGLKL---------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           +W    G+ L         ++ +  ++ G+ IVS+  DGL ++W   +  C+ T      
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------ 189
Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                 +  D+N  ++    FV FSP  + +++++ D T+KLW  +   CLK+  GH  +
Sbjct: 190 ------LIDDDNPPVS----FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KN 238
Query: 457 VLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
              C F N     G  IVS   D ++ +W+++T   V     H
Sbjct: 239 EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGH 281

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 24  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 81
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 82  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 126
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 127 SGSFDESVRIWDVKTGMCLKTLPAHS 152

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 110/230 (47%), Gaps = 34/230 (14%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
           AF   G  + +AS S DKTVK+W+  G  +LL  L     GH   +  V  SP+ + +AS
Sbjct: 23  AFSPDG--QTIASASDDKTVKLWNRNG--QLLQTL----TGHSSSVWGVAFSPDGQTIAS 74
Query: 338 GSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK 397
            S DKTVK+W+  G  +LL  L GH    + V+   DG          T  S  D   +K
Sbjct: 75  ASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDG---------QTIASASDDKTVK 123
Query: 398 IWTLAITKDEN----QIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
           +W      + N    Q +TG    VW V FSP  + + S+S D T+KLW     + L++L
Sbjct: 124 LW------NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTL 176
Query: 451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR 500
            GH +SV    F   G  I S   D  +KLW+ +    + T   H+  +R
Sbjct: 177 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVR 225

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 35/223 (15%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL S S DKT+K+W  + G K L  L    KGH   + C   +P   L+ SGS D++V+
Sbjct: 81  NLLVSASDDKTLKIWDVSSG-KCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 346 VWSTTGGLKL---------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           +W    G+ L         ++ +  ++ G+ IVS+  DGL ++W   +  C+ T      
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------ 189
Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
                 +  D+N  ++    FV FSP  + +++++ D  +KLW  +   CLK+  GH  +
Sbjct: 190 ------LIDDDNPPVS----FVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGH-KN 238
Query: 457 VLRCHFIN----KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
              C F N     G  IVS   D ++ +W+++T   V     H
Sbjct: 239 EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGH 281

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
           G  K ++ ++    G  + S+ AD L+K+W         T   H L I  +A + D N  
Sbjct: 24  GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-- 81
Query: 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470
                          +L+S+S D T+K+W ++   CLK+L+GH   V  C+F  +   IV
Sbjct: 82  ---------------LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 126
Query: 471 STGADGLLKLWSIKTSTCVSTFDKHA 496
           S   D  +++W +KT  C+ T   H+
Sbjct: 127 SGSFDESVRIWDVKTGMCLKTLPAHS 152

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 44/232 (18%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
           ++ SGS D+T+KVW+   G + ++ L GH       + C+ +  ++K + SGS D T++V
Sbjct: 171 IIISGSTDRTLKVWNAETG-ECIHTLYGHTS----TVRCMHL--HEKRVVSGSRDATLRV 223
Query: 347 WSTTGGLKLLNVLRGH--------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 398
           W    G + L+VL GH          G ++VS   D ++K+W  +T TC+ T   H  ++
Sbjct: 224 WDIETG-QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282
Query: 399 WTLAITKDENQIITGG------VWFVNFSPL-----------------DRILISSSGDAT 435
           ++L    D   +++G       VW V                      D IL+S + D+T
Sbjct: 283 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADST 340
Query: 436 IKLWCLTDYVCLKSLEGHD--ASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485
           +K+W +    CL++L+G +   S + C   NK   ++++  DG +KLW +KT
Sbjct: 341 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKT 391

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 351 GGLKLLNVLRGHKK---------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL 401
           G LK   VL+GH           G +IVS   D  LK+WS  T  C+ T   H       
Sbjct: 106 GELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH------- 158
Query: 402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH 461
                     TGGVW       D I+IS S D T+K+W      C+ +L GH ++V RC 
Sbjct: 159 ----------TGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCM 205
Query: 462 FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR 500
            +++  ++VS   D  L++W I+T  C+     H   +R
Sbjct: 206 HLHE-KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 273 EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND 332
           E   G +      + + SG  D T+K+W     L+   +L GH        + + +  ++
Sbjct: 131 ETSKGVYCLQYDDQKIVSGLRDNTIKIWDK-NTLECKRILTGHTG------SVLCLQYDE 183
Query: 333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392
           +++ +GS D TV+VW    G ++LN L  H           + +L L        V+   
Sbjct: 184 RVIITGSSDSTVRVWDVNTG-EMLNTLIHH----------CEAVLHL-RFNNGMMVTCSK 231
Query: 393 KHALKIWTLAITKD--ENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKS 449
             ++ +W +A   D    +++ G    VN    D + ++S+SGD TIK+W  +    +++
Sbjct: 232 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 291
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR 500
           L GH   +    + ++   +VS  +D  ++LW I+   C+   + H   +R
Sbjct: 292 LNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 340

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDK 342
           T   + SGS D TVK+W+      L        +GHE  + CV  +P D    ASG LD+
Sbjct: 108 TKPYVLSGSDDLTVKLWNWENNWALEQTF----EGHEHFVMCVAFNPKDPSTFASGCLDR 163
Query: 343 TVKVWSTTGGLKLLNVLRGHKKGTQIVS-----------TGADGL-LKLWSIKTSTCVST 390
           TVKVWS         +  G ++G   V            T +D L +K+W  +T +CV+T
Sbjct: 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
            + H                    V F  F P   I+IS S D T+K+W  + Y   K+L
Sbjct: 224 LEGHM-----------------SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDK 342
           T   + SGS D TVK+W+      L        +GHE  + CV  +P D    ASG LD+
Sbjct: 108 TKPYVLSGSDDLTVKLWNWENNWALEQTF----EGHEHFVMCVAFNPKDPSTFASGCLDR 163
Query: 343 TVKVWSTTGGLKLLNVLRGHKKGTQIVS-----------TGADGL-LKLWSIKTSTCVST 390
           TVKVWS         +  G ++G   V            T +D L +K+W  +T +CV+T
Sbjct: 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
            + H                    V F  F P   I+IS S D T+K+W  + Y   K+L
Sbjct: 224 LEGHM-----------------SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWS 348
           SGS D TVK+W+      L        +GHE  + CV  +P D    ASG LD+TVKVWS
Sbjct: 114 SGSDDLTVKLWNWENNWALEQTF----EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169
Query: 349 TTGGLKLLNVLRGHKKGTQIVS-----------TGADGL-LKLWSIKTSTCVSTFDKHAL 396
                    +  G ++G   V            T +D L +K+W  +T +CV+T + H  
Sbjct: 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-- 227
Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
                             V F  F P   I+IS S D T+K+W  + Y   K+L
Sbjct: 228 ---------------MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDK 342
           T   + SGS D TVK+W+      L        +GHE  + CV  +P D    ASG LD+
Sbjct: 108 TKPYVLSGSDDLTVKLWNWENNWALEQTF----EGHEHFVMCVAFNPKDPSTFASGCLDR 163
Query: 343 TVKVWSTTGGLKLLNVLRGHKKGTQIVS-----------TGADGL-LKLWSIKTSTCVST 390
           TVKVWS         +  G ++G   V            T +D L +K+W  +T +CV+T
Sbjct: 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
            + H                    V F  F P   I+IS S D T+K+W  + Y   K+L
Sbjct: 224 LEGHM-----------------SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 55/212 (25%)
Query: 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL 335
           H  F   G  + +AS   DKT++V+    G KLL++     K HE ++ C   S +D  +
Sbjct: 627 HACFSQDG--QRIASCGADKTLQVFKAETGEKLLDI-----KAHEDEVLCCAFSSDDSYI 679
Query: 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           A+ S DK VK+                                 W   T   V T+D+H+
Sbjct: 680 ATCSADKKVKI---------------------------------WDSATGKLVHTYDEHS 706
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
            ++     T   N ++               L + S D  +KLW L    C  ++ GH  
Sbjct: 707 EQVNCCHFTNKSNHLL---------------LATGSNDFFLKLWDLNQKECRNTMFGHTN 751
Query: 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
           SV  C F      + S  ADG L+LW ++++ 
Sbjct: 752 SVNHCRFSPDDELLASCSADGTLRLWDVRSAN 783

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
           + G +I S GAD  L+++  +T   +     H  ++   A + D++ I T          
Sbjct: 632 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT---------- 681
Query: 423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGA-DGLLKL 480
                   S D  +K+W       + + + H   V  CHF NK   ++ +TG+ D  LKL
Sbjct: 682 -------CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 734
Query: 481 WSIKTSTCVSTFDKH 495
           W +    C +T   H
Sbjct: 735 WDLNQKECRNTMFGH 749

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
           A+   GT  LLAS   D+ +++W T G   +   +    +GH++ +  V  SP    LAS
Sbjct: 23  AWNPAGT--LLASCGGDRRIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLAS 78
Query: 338 GSLDKTVKVWS-TTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
            S D T  +W       + +  L GH+   + V+    G L       +TC  + DK   
Sbjct: 79  ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL------LATC--SRDK--- 127
Query: 397 KIWTLAITK-DENQII------TGGVWFVNFSPLDRILISSSGDATIKLWCL--TDYVCL 447
            +W   + + DE + +      T  V  V + P   +L S+S D T+KL+     D+VC 
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC 187
Query: 448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481
            +LEGH+++V    F   G ++ S   D  +++W
Sbjct: 188 ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 55/212 (25%)
Query: 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL 335
           H  F   G  + +AS   DKT++V+    G KLL++     K HE ++ C   S +D  +
Sbjct: 620 HACFSQDG--QRIASCGADKTLQVFKAETGEKLLDI-----KAHEDEVLCCAFSSDDSYI 672
Query: 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
           A+ S DK VK+                                 W   T   V T+D+H+
Sbjct: 673 ATCSADKKVKI---------------------------------WDSATGKLVHTYDEHS 699
Query: 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA 455
            ++     T   N ++               L + S D  +KLW L    C  ++ GH  
Sbjct: 700 EQVNCCHFTNKSNHLL---------------LATGSNDFFLKLWDLNQKECRNTMFGHTN 744
Query: 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
           SV  C F      + S  ADG L+LW ++++ 
Sbjct: 745 SVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
           + G +I S GAD  L+++  +T   +     H  ++   A + D++ I T          
Sbjct: 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT---------- 674
Query: 423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGA-DGLLKL 480
                   S D  +K+W       + + + H   V  CHF NK   ++ +TG+ D  LKL
Sbjct: 675 -------CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727
Query: 481 WSIKTSTCVSTFDKH 495
           W +    C +T   H
Sbjct: 728 WDLNQKECRNTMFGH 742

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 287 LLASGSLDKTVKVWSTT-GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +LA+GS D+ +K+ S       L++VL   +  H+K I  V   P+  LLA+GS D TV 
Sbjct: 26  ILATGSTDRKIKLVSVKYDDFTLIDVL--DETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83
Query: 346 VWST------TGGLKLLNVLRGHKKGTQIVSTGADG-LLKLWSIKTSTCVSTFDKHALKI 398
           +W+       T  + LL ++ GH+   + V+   DG  L   S   S  +   D+   + 
Sbjct: 84  IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143
Query: 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW--CLTDYVCLKSLEGHDAS 456
             +++ ++ +Q +   +W     P + +L SSS D T+++W     D+ C+  L GH+ +
Sbjct: 144 ECISVLQEHSQDVKHVIWH----PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT 199
Query: 457 VLRCHF 462
           V    F
Sbjct: 200 VWSSDF 205

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 26  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 86  DKTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 144 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++     + T 
Sbjct: 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 26  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 86  DKTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 144 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++     + T 
Sbjct: 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 26  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 86  DKTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 144 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++     + T 
Sbjct: 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 20  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 79
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 80  DKTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 137
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 138 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKMVKAWNLNQFQIEAD 185
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++     + T 
Sbjct: 186 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 228

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 26  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 86  DKTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 144 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++     + T 
Sbjct: 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT 343
           T+ + AS SLD  +++W    G ++ ++  G       D   +  SP+ + LA+G+    
Sbjct: 91  TLPIAASSSLDAHIRLWDLENGKQIKSIDAG-----PVDAWTLAFSPDSQYLATGTHVGK 145
Query: 344 VKVWSTTGGLKLLNV-LRGH--------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394
           V ++    G K  ++  RG           G  + S   DG++ ++ I T   + T + H
Sbjct: 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 205
Query: 395 ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454
           A+ I +L                  FSP  ++L+++S D  IK++ +       +L GH 
Sbjct: 206 AMPIRSLT-----------------FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 248
Query: 455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
           + VL   F    T  VS+ +D  +K+W + T TCV TF  H  ++
Sbjct: 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV 293

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL 340
           + G   LL S S DKT+  W  TG  +   V     KGH   +   T++ +     S S 
Sbjct: 26  SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85
Query: 341 DKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTGADGLLKLWSIKTSTCVST 390
           DKT+++W    G +      GH          KK + I+S   D  +K+W+IK   C++T
Sbjct: 86  DKTLRLWDVATG-ETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVWTIK-GQCLAT 143
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKS 449
              H   +  + +  +E             +  D + I S+G D  +K W L  +     
Sbjct: 144 LLGHNDWVSQVRVVPNEK------------ADDDSVTIISAGNDKXVKAWNLNQFQIEAD 191
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492
             GH++++        GT I S G DG + LW++       T 
Sbjct: 192 FIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTL 234

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 285 VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
            +++ S S DK++ +W  T   K   V +    GH   +  V +S + +   SGS D  +
Sbjct: 395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454
Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
           ++W    G+     + GH K         D L   +S+     VS      +K+W   + 
Sbjct: 455 RLWDLAAGVSTRRFV-GHTK---------DVLSVAFSLDNRQIVSASRDRTIKLWN-TLG 503
Query: 405 KDENQIITGG------VWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
           + +  I  GG      V  V FSP  L   ++S+S D T+K+W L++     +L GH   
Sbjct: 504 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY 563
Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSI 483
           V        G+   S G DG++ LW +
Sbjct: 564 VSTVAVSPDGSLCASGGKDGVVLLWDL 590

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 64/246 (26%)
Query: 268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT 327
           G++  +  HG         +L SGS D+TV+VW    G    +V     +GH   + C+ 
Sbjct: 164 GVWALKYAHGG--------ILVSGSTDRTVRVWDIKKGC-CTHVF----EGHNSTVRCLD 210
Query: 328 V--SPNDKLLASGSLDKTVKVW----------------------STTGGLKLLNVLRGHK 363
           +    N K + +GS D T+ VW                      +       + VLRGH 
Sbjct: 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270
Query: 364 K--------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415
                    G  +VS   D  L +W +    C+     H  +I++     +  + I    
Sbjct: 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI---- 326
Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD 475
                        S+S D TI++W L +   + +L+GH A V      +K   +VS  AD
Sbjct: 327 -------------SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF--LVSAAAD 371
Query: 476 GLLKLW 481
           G ++ W
Sbjct: 372 GSIRGW 377

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           F P    LISSS D  +K+W + D    ++L GH A+V     I++G  ++S   DG ++
Sbjct: 144 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIR 203
Query: 480 LWSIKTSTCVSTFDKHALKIRNSDSENDHKG-------FGLPRQL 517
           LW   T T + TF++          EN H G        G  RQL
Sbjct: 204 LWECGTGTTIHTFNR---------KENPHDGVNSIALFVGTDRQL 239

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           F P    LISSS D  +K+W + D    ++L GH A+V     I++G  ++S   DG ++
Sbjct: 147 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIR 206
Query: 480 LWSIKTSTCVSTFDKHALKIRNSDSENDHKG-------FGLPRQL 517
           LW   T T + TF++          EN H G        G  RQL
Sbjct: 207 LWECGTGTTIHTFNR---------KENPHDGVNSIALFVGTDRQL 242

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 64/246 (26%)
Query: 268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT 327
           G++  +  HG         +L SGS D+TV+VW    G    +V     +GH   + C+ 
Sbjct: 164 GVWALKYAHGG--------ILVSGSTDRTVRVWDIKKGC-CTHVF----EGHNSTVRCLD 210
Query: 328 V--SPNDKLLASGSLDKTVKVW----------------------STTGGLKLLNVLRGHK 363
           +    N K + +GS D T+ VW                      +       + VLRGH 
Sbjct: 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHX 270
Query: 364 K--------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415
                    G  +VS   D  L +W +    C+     H  +I++     +  +      
Sbjct: 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKR------ 324
Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD 475
                       IS+S D TI++W L +     +L+GH A V      +K   +VS  AD
Sbjct: 325 -----------CISASXDTTIRIWDLENGELXYTLQGHTALVGLLRLSDKF--LVSAAAD 371
Query: 476 GLLKLW 481
           G ++ W
Sbjct: 372 GSIRGW 377

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +   SGS D T+++W  T G      +     GH KD+  V  S +++ + SGS DKT+K
Sbjct: 99  QFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGSRDKTIK 153
Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
           +W+T G  K       H +    V    +             VS      +K+W LA  K
Sbjct: 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNS-------SNPIIVSCGWDKLVKVWNLANCK 206
Query: 406 DENQII--TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI 463
            +   I  TG +  V  SP   +  S   D    LW L +   L +L+G D     C   
Sbjct: 207 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP 266
Query: 464 NKGTQIVSTGADGLLKLWSIK 484
           N+     +TG    +K+W ++
Sbjct: 267 NRYWLCAATGPS--IKIWDLE 285

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +   SGS D T+++W  T G      +     GH KD+  V  S +++ + SGS DKT+K
Sbjct: 76  QFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
           +W+T G  K       H +    V    +             VS      +K+W LA  K
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNS-------SNPIIVSCGWDKLVKVWNLANCK 183
Query: 406 DENQII--TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI 463
            +   I  TG +  V  SP   +  S   D    LW L +   L +L+G D     C   
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 464 NKGTQIVSTGADGLLKLWSIK 484
           N+     +TG    +K+W ++
Sbjct: 244 NRYWLCAATGPS--IKIWDLE 262

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT---GGLKLLNVLRGHKKG--------- 365
           GH +++  +  +P+ + LASG  D  V VW +    GG   L     H+           
Sbjct: 239 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 298
Query: 366 -TQIVSTG---ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
            + +++TG   +D  +++W++ +  C+S  D H+             Q+ +     + +S
Sbjct: 299 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-------------QVCS-----ILWS 340
Query: 422 PLDRILISSSGDATIKL--WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           P  + LIS  G A  +L  W       +  L+GH + VL       G  + S  AD  L+
Sbjct: 341 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 400
Query: 480 LW 481
           LW
Sbjct: 401 LW 402

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT---GGLKLLNVLRGHKKG--------- 365
           GH +++  +  +P+ + LASG  D  V VW +    GG   L     H+           
Sbjct: 228 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 287
Query: 366 -TQIVSTG---ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
            + +++TG   +D  +++W++ +  C+S  D H+             Q+ +     + +S
Sbjct: 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-------------QVCS-----ILWS 329
Query: 422 PLDRILISSSGDATIKL--WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           P  + LIS  G A  +L  W       +  L+GH + VL       G  + S  AD  L+
Sbjct: 330 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389
Query: 480 LW 481
           LW
Sbjct: 390 LW 391

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 318 GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT---GGLKLLNVLRGHKKG--------- 365
           GH +++  +  +P+ + LASG  D  V VW +    GG   L     H+           
Sbjct: 148 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 207
Query: 366 -TQIVSTG---ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
            + +++TG   +D  +++W++ +  C+S  D H+             Q+ +     + +S
Sbjct: 208 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-------------QVCS-----ILWS 249
Query: 422 PLDRILISSSGDATIKL--WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           P  + LIS  G A  +L  W       +  L+GH + VL       G  + S  AD  L+
Sbjct: 250 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 309
Query: 480 LW 481
           LW
Sbjct: 310 LW 311

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVW---------STTGGLKLLNVLRGHKKGTQ 367
           KGH   + C+    + + + S S D  V VW         + T     +        G  
Sbjct: 61  KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCA 120
Query: 368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL 427
           I   G D    ++ +       TFDK+      +A  K    + T  +   +F+  D  +
Sbjct: 121 IACGGLDNKCSVYPL-------TFDKNE----NMAAKKKSVAMHTNYLSACSFTNSDMQI 169
Query: 428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI--NKGTQIVSTGADGLLKLWSIKT 485
           +++SGD T  LW +     L+S  GH A VL         G   VS G D    +W +++
Sbjct: 170 LTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229
Query: 486 STCVSTFDKH 495
             CV  F+ H
Sbjct: 230 GQCVQAFETH 239

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305
            +++P    ++  R+T    L  I+       A + G    LL S S D  + +W +   
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIY-------AMHWGTDSRLLVSASQDGKLIIWDSYTT 87
Query: 306 LKLLNV-LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW---STTGGLKLLNVLRG 361
            K+  + LR         +     +P+   +A G LD    ++   +  G +++   L G
Sbjct: 88  NKVHAIPLRSSW------VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141
Query: 362 HK---------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412
           H             QIV++  D    LW I+T    +TF  H                 T
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH-----------------T 184
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +    F   G    + 
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 473 GADGLLKLWSIKTSTCVSTF 492
             D   +L+ ++    + T+
Sbjct: 245 SDDATCRLFDLRADQELMTY 264

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378
           H  D+  ++++P+ +L  SG+ D + K+W    G+       GH+     +    +G   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAF 241
Query: 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
                 +TC   FD  A +     +T   + II G +  V+FS   R+L++   D    +
Sbjct: 242 ATGSDDATC-RLFDLRADQ---ELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
           W          L GHD  V      + G  + +   D  LK+W+
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305
            +++P    ++  R+T    L  I+       A + G    LL S S D  + +W +   
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIY-------AMHWGTDSRLLVSASQDGKLIIWDSYTT 87
Query: 306 LKLLNV-LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW---STTGGLKLLNVLRG 361
            K+  + LR         +     +P+   +A G LD    ++   +  G +++   L G
Sbjct: 88  NKVHAIPLRSSW------VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141
Query: 362 HK---------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412
           H             QIV++  D    LW I+T    +TF  H                 T
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH-----------------T 184
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +    F   G    + 
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 473 GADGLLKLWSIKTSTCVSTF 492
             D   +L+ ++    + T+
Sbjct: 245 SDDATCRLFDLRADQELMTY 264

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378
           H  D+  ++++P+ +L  SG+ D + K+W    G+       GH+     +    +G   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAF 241
Query: 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
                 +TC   FD  A +     +T   + II G +  V+FS   R+L++   D    +
Sbjct: 242 ATGSDDATC-RLFDLRADQ---ELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
           W          L GHD  V      + G  + +   D  LK+W+
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305
            +++P    ++  R+T    L  I+       A + G    LL S S D  + +W +   
Sbjct: 46  NNIDPVGRIQMRTRRTLRGHLAKIY-------AMHWGTDSRLLVSASQDGKLIIWDSYTT 98
Query: 306 LKLLNV-LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW---STTGGLKLLNVLRG 361
            K+  + LR         +     +P+   +A G LD    ++   +  G +++   L G
Sbjct: 99  NKVHAIPLRSSW------VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 152
Query: 362 HK---------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412
           H             QIV++  D    LW I+T    +TF  H                 T
Sbjct: 153 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH-----------------T 195
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +    F   G    + 
Sbjct: 196 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 255
Query: 473 GADGLLKLWSIKTSTCVSTF 492
             D   +L+ ++    + T+
Sbjct: 256 SDDATCRLFDLRADQELMTY 275

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378
           H  D+  ++++P+ +L  SG+ D + K+W    G+       GH+     +    +G   
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAF 252
Query: 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
                 +TC   FD  A +     +T   + II G +  V+FS   R+L++   D    +
Sbjct: 253 ATGSDDATC-RLFDLRADQ---ELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNV 307
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
           W          L GHD  V      + G  + +   D  LK+W+
Sbjct: 308 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 351

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 55/292 (18%)
Query: 237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT 296
           V +  L  R S + +  ++ E   T   P   +++       F   G  + LA+G+ D+ 
Sbjct: 92  VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV---CFSPDG--KFLATGAEDRL 146
Query: 297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW--------- 347
           +++W      K++ +L    +GHE+DI  +   P+   L SGS D+TV++W         
Sbjct: 147 IRIWDIEN-RKIVMIL----QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 201
Query: 348 --STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
             S   G+  + V  G   G  I +   D  +++W  +T   V   D             
Sbjct: 202 TLSIEDGVTTVAVSPG--DGKYIAAGSLDRAVRVWDSETGFLVERLDS------------ 247
Query: 406 DENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDY------------VCLKSL 450
            EN+  TG    V+ V F+   + ++S S D ++KLW L +              C  + 
Sbjct: 248 -ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 306
Query: 451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNS 502
            GH   VL          I+S   D  +  W  K+   +     H    RNS
Sbjct: 307 IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH----RNS 354

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305
            +++P    ++  R+T    L  I+       A + G    LL S S D  + +W +   
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIY-------AMHWGTDSRLLLSASQDGKLIIWDSYTT 87
Query: 306 LKLLNV-LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW---STTGGLKLLNVLRG 361
            K+  + LR         +     +P+   +A G LD    ++   +  G +++   L G
Sbjct: 88  NKVHAIPLRSSW------VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141
Query: 362 HK---------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412
           H             QIV++  D    LW I+T    +TF  H                 T
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH-----------------T 184
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +    F   G    + 
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 473 GADGLLKLWSIKTSTCVSTF 492
             D   +L+ ++    + T+
Sbjct: 245 SDDATCRLFDLRADQELMTY 264

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378
           H  D+  ++++P+ +L  SG+ D + K+W    G+       GH+     +    +G   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAF 241
Query: 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
                 +TC   FD  A +     +T   + II G +  V+FS   R+L++   D    +
Sbjct: 242 ATGSDDATC-RLFDLRADQ---ELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
           W          L GHD  V      + G  + +   D  LK+W+
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305
            +++P    ++  R+T    L  I+       A + G    LL S S D  + +W +   
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIY-------AMHWGTDSRLLLSASQDGKLIIWDSYTT 87
Query: 306 LKLLNV-LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW---STTGGLKLLNVLRG 361
            K+  + LR         +     +P+   +A G LD    ++   +  G +++   L G
Sbjct: 88  NKVHAIPLRSSW------VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141
Query: 362 HK---------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412
           H             QIV++  D    LW I+T    +TF  H                 T
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH-----------------T 184
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +    F   G    + 
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 473 GADGLLKLWSIKTSTCVSTF 492
             D   +L+ ++    + T+
Sbjct: 245 SDDATCRLFDLRADQELMTY 264

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378
           H  D+  ++++P+ +L  SG+ D + K+W    G+       GH+     +    +G   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAF 241
Query: 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438
                 +TC   FD  A +     +T   + II G +  V+FS   R+L++   D    +
Sbjct: 242 ATGSDDATC-RLFDLRADQ---ELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
           W          L GHD  V      + G  + +   D  LK+W+
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--GHEKDINCVTVSPNDKLLASGSLDKTV 344
           +L SGS DKTV +W      +       HK   GH   ++ + +S  +    S S DKT+
Sbjct: 41  VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTL 100
Query: 345 KVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394
           ++W    G      + GH+             QI+S GA+  +KLW+I      S+ +K 
Sbjct: 101 RLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159
Query: 395 ALKIWT-----LAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS 449
               W        I K  N++           P      S   D  +K+W  T++    +
Sbjct: 160 NHSDWVSCVRYSPIMKSANKV----------QPFAPYFASVGWDGRLKVWN-TNFQIRYT 208
Query: 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483
            + H+++V        G  I + G D  L +W I
Sbjct: 209 FKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 28/149 (18%)
Query: 363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG------VW 416
             G   VS   D  L+LW+++   C   F  H   + ++A + D  QI++GG      VW
Sbjct: 77  NNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVW 136
Query: 417 --------------------FVNFSP-LDRILISSSG-DATIKLWCLTDYVCLKSLEGHD 454
                                V FSP LD  +I S G D  +K+W L     +  L+GH 
Sbjct: 137 NVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHT 196
Query: 455 ASVLRCHFINKGTQIVSTGADGLLKLWSI 483
             V        G+   S+  DG+ +LW +
Sbjct: 197 NYVTSVTVSPDGSLCASSDKDGVARLWDL 225

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
           +S+S D +++LW L +  C     GH   VL   F     QIVS G D  L++W++K   
Sbjct: 83  VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNVK-GE 141
Query: 488 CVSTFDKHA 496
           C+ T  + A
Sbjct: 142 CMHTLSRGA 150

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 52/217 (23%)
Query: 323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH----------KKGTQIVSTG 372
           + C+  S +   + +G  +  +++W+ TG L  LNVL  H          K GT I+S  
Sbjct: 111 VTCLAWSHDGNSIVTGVENGELRLWNKTGAL--LNVLNFHRAPIVSVKWNKDGTHIISMD 168
Query: 373 ADGLLKLWSIKTSTCVSTFD-------------------------------------KHA 395
            + +  LW++ + T +  F+                                     K A
Sbjct: 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGA 228
Query: 396 LKIWTLAITKDENQIIT--GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH 453
           + ++ +       ++I   G +  + F+  +++L+S+S D T+++W   +        GH
Sbjct: 229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH 288
Query: 454 DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490
             S++   ++    +++S   DG ++LWS+K +T ++
Sbjct: 289 SQSIVSASWVGD-DKVISCSMDGSVRLWSLKQNTLLA 324

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASG--SLDKTV 344
           LASG  D  V++W     +         K  H   +  V   P    LLA+G  ++DK +
Sbjct: 232 LASGGNDNVVQIWDARSSIPKFT-----KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286
Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST--FDKHALKIWTLA 402
             W+   G ++  V      G+Q+ S        +WS  +   +ST  F  + L IW+ +
Sbjct: 287 HFWNAATGARVNTV----DAGSQVTSL-------IWSPHSKEIMSTHGFPDNNLSIWSYS 335
Query: 403 ITKDENQIITGG----VWFVNFSPLDRILISSSGDATIKLWCLTD 443
            +    Q+        V +   SP  RIL +++ D  +K W + D
Sbjct: 336 SSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV-SPNDKLLASGSLDKTVKV 346
           L +GS D+T  +W  T G ++         GH  D+  +++ S N  +  SGS D TV++
Sbjct: 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232
Query: 347 WSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           W      + +    GH+           G +  +   DG  +L+ ++T         H L
Sbjct: 233 WDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG--------HQL 284
Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILIS--SSGDATIKLWCLTDYVC-LKSLEGH 453
           +++     +++N++    V  V FS   R+L +  S+GD  +    L + V  L +L+  
Sbjct: 285 QVYNREPDRNDNELPI--VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS 342
Query: 454 DASVLRCHFINKGTQIVSTGA-DGLLKLWSI 483
               + C  ++     + TG+ D  LK+W+ 
Sbjct: 343 HEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 67/168 (39%), Gaps = 38/168 (22%)
Query: 265 PLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN 324
           P F   + EA  G  +    + L  +G +DK V +                  GH   + 
Sbjct: 44  PKFMALIXEASGGGAFL--VLPLGKTGRVDKNVPL----------------VXGHTAPVL 85
Query: 325 CVTVSP-NDKLLASGSLDKTVKVWSTT-GGLKL-----LNVLRGHKKGTQIV-------- 369
            +   P ND ++ASGS D TV VW    GGL L     +  L GH K   IV        
Sbjct: 86  DIAWXPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN 145
Query: 370 ---STGADGLLKLWSIKTSTCVSTF--DKHALKIWTLAITKDENQIIT 412
              S G D ++ +W + T   V T   D H   I+++  ++D   I T
Sbjct: 146 VLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICT 193

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 318 GHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTT-GGLKL-----LNVLRGHKKGTQIV- 369
           GH   +  +   P ND ++ASGS D TV VW    GGL L     +  L GH K   IV 
Sbjct: 79  GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138
Query: 370 ----------STGADGLLKLWSIKTSTCVSTF--DKHALKIWTLAITKDENQIIT 412
                     S G D ++ +W + T   V T   D H   I+++  ++D   I T
Sbjct: 139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICT 193

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	537
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.98
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.98
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.98
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.98
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.98
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.98
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.98
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.96
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.94
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.93
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.92
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.92
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.91
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.89
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.88
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.87
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.87
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.87
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.86
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.84
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.84
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.84
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.83
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.82
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.82
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.82
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.82
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.82
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.81
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.79
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.79
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.79
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.78
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.77
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.76
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.75
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.74
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.72
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.7
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.66
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.64
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.64
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.62
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.61
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.6
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.59
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.59
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.59
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.58
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.58
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.57
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.56
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.55
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.55
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.53
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.53
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.52
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.52
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.51
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.49
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.48
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.48
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.44
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.43
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.43
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.43
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.42
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.38
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.36
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.35
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.35
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.35
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.33
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.31
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.28
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.28
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.27
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.25
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.24
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.24
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.23
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.23
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.23
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.22
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.22
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.2
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.19
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.16
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.15
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.15
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.14
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.13
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.11
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.02
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.02
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.0
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.0
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.95
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.95
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.93
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.92
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.92
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.91
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.91
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.91
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.86
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.86
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.85
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.85
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.81
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.78
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.74
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.74
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.72
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.71
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.7
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.67
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.64
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.61
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.55
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.54
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.53
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.52
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.48
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.47
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.46
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.44
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.28
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.23
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.21
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.21
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.2
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.19
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.11
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.09
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.06
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.03
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.95
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.95
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.93
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.87
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.87
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.83
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.75
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.74
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.73
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.71
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.7
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.69
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.67
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.57
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.5
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.5
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.49
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.45
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.44
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.43
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.31
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.31
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.3
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.29
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.16
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.14
3ott_A	758	Two-component system sensor histidine kinase; beta	97.06
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.05
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.04
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.99
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.79
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.78
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.74
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.71
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.66
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.54
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.48
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.39
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.39
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.3
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.1
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	95.94
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.87
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.84
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.72
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.71
3ott_A	758	Two-component system sensor histidine kinase; beta	95.71
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.69
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.68
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	95.6
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	95.56
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.37
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	95.33
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	95.26
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	95.24
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.0
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.0
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.96
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.93
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.67
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.58
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	94.57
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.03
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	93.66
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	92.95
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	92.72
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	92.67
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	92.06
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	91.82
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	90.53
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	86.55
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	86.12
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	82.41
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	80.89
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	80.25

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.2e-58  Score=468.10  Aligned_cols=447  Identities=22%  Similarity=0.292  Sum_probs=369.9

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|+|++|+  |||++|++++.|+.|+|||. ++++++.+. +..++.++  .++|        ++++|++++.|+.|++
T Consensus        17 ~~V~~~a~s--pdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l--~fsp--------dg~~las~~~d~~i~v   83 (577)
T 2ymu_A           17 SSVRGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV--AFSP--------DGQTIASASDDKTVKL   83 (577)
T ss_dssp             SCEEEEEEC--TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEE--EECT--------TSSEEEEEETTSCEEE
T ss_pred             CcEEEEEEC--CCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEE--EECC--------CCCEEEEEeCCCEEEE
Confidence            369999999  89999999999999999994 778888777 56677777  5688        6789999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcc----------------------------
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLE----------------------------  132 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~----------------------------  132 (537)
                      ||. +++.+..+..+ +.|.+++|+|++++|++++.|+.+++|+........                            
T Consensus        84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  162 (577)
T 2ymu_A           84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT  162 (577)
T ss_dssp             EET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred             EEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccc
Confidence            996 56667777655 588888888888888888888888777743210000                            


Q ss_pred             -------------------------ccc-----------------ccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942        133 -------------------------ERP-----------------NKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus       133 -------------------------~~~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                                               ..+                 ....+....+.+|...|.+++|+ +++..|++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~  241 (577)
T 2ymu_A          163 VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFS-PDGQTIASASD  241 (577)
T ss_dssp             EEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEEC-TTSSCEEEEET
T ss_pred             eeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEEC-CCCCEEEEEeC
Confidence                                     000                 01134566778899999999999 78888888887


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                      ++.    +                 ++||.       ...... +.     +|  ...|.++   +|+|+++.+++++.|
T Consensus       242 d~~----i-----------------~~w~~-------~~~~~~~~~-----~~--~~~v~~v---~~~~d~~~l~~~~~d  283 (577)
T 2ymu_A          242 DKT----V-----------------KLWNR-------NGQLLQTLT-----GH--SSSVNGV---AFRPDGQTIASASDD  283 (577)
T ss_dssp             TSC----E-----------------EEECT-------TSCEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETT
T ss_pred             CCE----E-----------------EEEeC-------CCCEEEEEe-----cC--CCCEEEE---EEcCCCCEEEEEeCC
Confidence            776    9                 99987       543333 66     89  9999999   999999999999999


Q ss_pred             CcceeccccccCCCcccccccccccceeeeeeC--C------cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--G------TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~------~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      +.++  +|+.....          ...+.+|..  .      .-..+++++.|+.|++||.....      ...+..|..
T Consensus       284 ~~i~--~w~~~~~~----------~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~------~~~~~~~~~  345 (577)
T 2ymu_A          284 KTVK--LWNRNGQL----------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH------LQTLTGHSS  345 (577)
T ss_dssp             SCEE--EEETTSCE----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE------EEEECCCSS
T ss_pred             CEEE--EEeCCCcE----------EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe------eEEEeCCCC
Confidence            9999  99976521          222233322  1      11589999999999999987654      334568899


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGG--------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  393 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  393 (537)
                      .|.+++|+|++++|++++.|+.+++||....        ...+..+...+++.++++++.|+.|++||. +++.+..+..
T Consensus       346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~  424 (577)
T 2ymu_A          346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG  424 (577)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC
T ss_pred             CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC
Confidence            9999999999999999999999999997521        122344455667899999999999999995 5778888999


Q ss_pred             CCcceEEEEEecCCCceEEe------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942        394 HALKIWTLAITKDENQIITG------------------------GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS  449 (537)
Q Consensus       394 ~~~~i~~~~~~~~~~~~~~~------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~  449 (537)
                      |...+.+++++|+++.++++                        .+.+++|+|++++|++++.|+.|++||. +++++..
T Consensus       425 ~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~  503 (577)
T 2ymu_A          425 HSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT  503 (577)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence            99999999999999988764                        4889999999999999999999999995 6788999


Q ss_pred             eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       450 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      +.+|...|++++|+|++++|++++.||.|++||. +++++..+.+|...|           +++   +|+|||++|+|++
T Consensus       504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v-----------~~~---~fs~dg~~l~s~~  568 (577)
T 2ymu_A          504 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-----------WGV---AFSPDGQTIASAS  568 (577)
T ss_dssp             EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE-----------EEE---EECTTSSCEEEEE
T ss_pred             EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCE-----------EEE---EEcCCCCEEEEEe
Confidence            9999999999999999999999999999999996 788999999999999           999   9999999999999


Q ss_pred             CCCCEEeC
Q psy10942        530 WSPQVVVY  537 (537)
Q Consensus       530 ~dg~i~vW  537 (537)
                      .|++|++|
T Consensus       569 ~D~~i~~W  576 (577)
T 2ymu_A          569 SDKTVKLW  576 (577)
T ss_dssp             TTSCEEEE
T ss_pred             CCCEEEEe
Confidence            99999999

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=5.3e-58  Score=464.09  Aligned_cols=449  Identities=11%  Similarity=0.116  Sum_probs=354.8

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccce--eeeec-cccccceeeeEeecCccccccCCcEEEEEeCcc---
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ--LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEK---   76 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   76 (537)
                      ..|++++|+  ||+++|++|+.||+|+|||+.+++.  ...++ +..++..+  .+.|        +++++++++.+   
T Consensus        60 ~~v~~~~~s--pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v--~fs~--------dg~~l~~~~~~~~~  127 (611)
T 1nr0_A           60 HQTTVAKTS--PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI--SWDS--------ESKRIAAVGEGRER  127 (611)
T ss_dssp             SCEEEEEEC--TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEE--EECT--------TSCEEEEEECCSSC
T ss_pred             CceEEEEEC--CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEE--EECC--------CCCEEEEEECCCCc
Confidence            469999999  8999999999999999999976543  33444 55677777  5688        55677776654   


Q ss_pred             -ceEEeeeccceehhhhcCCC-cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942         77 -SLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL  153 (537)
Q Consensus        77 -~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  153 (537)
                       +.|++||  .++.+..+..| +.|.+++|+|++. .|++++.|++|++||..+           .++...+.+|...|.
T Consensus       128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----------~~~~~~l~~H~~~V~  194 (611)
T 1nr0_A          128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----------FKFKSTFGEHTKFVH  194 (611)
T ss_dssp             SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----------BEEEEEECCCSSCEE
T ss_pred             eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----------CeEeeeeccccCceE
Confidence             5788888  45666667665 6999999999997 599999999999999887           678889999999999


Q ss_pred             hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc--cccccCCCcCeEE
Q psy10942        154 DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN--TERLGRDELKTVT  229 (537)
Q Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~--~~~~~h~~~~~v~  229 (537)
                      +++|+ |++++|++++.++.    |                 ++||.       .++++.  +..  ....+|  ...|.
T Consensus       195 ~v~fs-pdg~~las~s~D~~----i-----------------~lwd~-------~~g~~~~~~~~~~~~~~~h--~~~V~  243 (611)
T 1nr0_A          195 SVRYN-PDGSLFASTGGDGT----I-----------------VLYNG-------VDGTKTGVFEDDSLKNVAH--SGSVF  243 (611)
T ss_dssp             EEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTCCEEEECBCTTSSSCSS--SSCEE
T ss_pred             EEEEC-CCCCEEEEEECCCc----E-----------------EEEEC-------CCCcEeeeecccccccccc--CCCEE
Confidence            99999 78888888888877    9                 99998       666554  210  011279  99999


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccc--ceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEA--EHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      ++   +|+|++++|++++.|++++  +|++..+............  .......  .-..+++++.|+.+++|+...+..
T Consensus       244 ~v---~~spdg~~l~s~s~D~~v~--lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~  316 (611)
T 1nr0_A          244 GL---TWSPDGTKIASASADKTIK--IWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSI  316 (611)
T ss_dssp             EE---EECTTSSEEEEEETTSEEE--EEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEE
T ss_pred             EE---EECCCCCEEEEEeCCCeEE--EEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCc
Confidence            99   9999999999999999999  9999874321111000000  0000000  115789999999999999988764


Q ss_pred             eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-----------eEEEEecCCCCEEEEEcCCCc
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-----------LNVLRGHKKGTQIVSTGADGL  376 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-----------~~~~~~~~~~~~l~~~~~d~~  376 (537)
                           ...+.+|...|.+++|+|++++|++++.|+.|++||+.. ...           +..+...+ +..+++++.|+.
T Consensus       317 -----~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-~~~~~~~~~~h~~~v~~~~~s~-~~~l~s~s~d~~  389 (611)
T 1nr0_A          317 -----DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-GISNRVFPDVHATMITGIKTTS-KGDLFTVSWDDH  389 (611)
T ss_dssp             -----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEECSSCSCSSCEEEEEECT-TSCEEEEETTTE
T ss_pred             -----ceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-CceeeecccCCcceEEEEEECC-CCcEEEEEcCCc
Confidence                 344578999999999999999999999999999999983 332           23333333 457889999999


Q ss_pred             EEEEECCCCeee-----------------------------------------eeeccCCcceEEEEEecCCCceEEe--
Q psy10942        377 LKLWSIKTSTCV-----------------------------------------STFDKHALKIWTLAITKDENQIITG--  413 (537)
Q Consensus       377 i~i~d~~~~~~~-----------------------------------------~~~~~~~~~i~~~~~~~~~~~~~~~--  413 (537)
                      +++|+...+...                                         ..+ .+...+.+++++|+++.++++  
T Consensus       390 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~  468 (611)
T 1nr0_A          390 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQ  468 (611)
T ss_dssp             EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEET
T ss_pred             eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCC
Confidence            999997654211                                         011 134567889999999888764  


Q ss_pred             ------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeE--eecCCcceEEEEEecCC
Q psy10942        414 ------------------------GVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKS--LEGHDASVLRCHFINKG  466 (537)
Q Consensus       414 ------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~--~~~~~~~v~~~~~s~~~  466 (537)
                                              .|.+++|+||+++|++++.|+.|++||+.+ ++.+..  +.+|...|.+++|+||+
T Consensus       469 D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg  548 (611)
T 1nr0_A          469 DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN  548 (611)
T ss_dssp             TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred             CCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCC
Confidence                                    378899999999999999999999999987 666554  34599999999999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCe-eE-EEecCC-ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        467 TQIVSTGADGLLKLWSIKTST-CV-STFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~~~-~~-~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++||+++.|++|++||+.+++ .. ..+.+| ...|           .++   +|+|+++ |++++.|++|++|
T Consensus       549 ~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v-----------~~v---~fs~d~~-l~s~~~D~~i~lW  607 (611)
T 1nr0_A          549 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV-----------NSV---IWLNETT-IVSAGQDSNIKFW  607 (611)
T ss_dssp             SEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCE-----------EEE---EEEETTE-EEEEETTSCEEEE
T ss_pred             CEEEEEECCCcEEEEECCCcccccchhhccCcccCe-----------eEE---EEcCCCE-EEEecCCCCEEEE
Confidence            999999999999999998765 33 667789 7889           899   9999998 9999999999999

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3e-55  Score=443.97  Aligned_cols=445  Identities=16%  Similarity=0.165  Sum_probs=347.6

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      .+.+++|+  |||++|++++ ++.|++||+++++....+. +...+.++  .++|        +++++++++.|+.|++|
T Consensus        20 ~~~~~~~s--pdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~--~~sp--------dg~~lasg~~d~~v~lW   86 (611)
T 1nr0_A           20 TAVVLGNT--PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVA--KTSP--------SGYYCASGDVHGNVRIW   86 (611)
T ss_dssp             CCCCCEEC--TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEE--EECT--------TSSEEEEEETTSEEEEE
T ss_pred             ceeEEeeC--CCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEE--EECC--------CCcEEEEEeCCCCEEEe
Confidence            46788999  8999999987 4689999999988888776 56677777  5688        77999999999999999


Q ss_pred             eccceeh--hhhcC-CCcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         83 ETSAVKE--LYQHG-LSSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        83 d~~~~~~--~~~~~-~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      |+.+++.  ...+. +.+.|.+++|+||+++||+++.+    +.|++||.             ......+.+|...|.++
T Consensus        87 d~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-------------~~~~~~l~gh~~~v~~v  153 (611)
T 1nr0_A           87 DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-------------GTSNGNLTGQARAMNSV  153 (611)
T ss_dssp             ESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-------------CCBCBCCCCCSSCEEEE
T ss_pred             ECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-------------CCCcceecCCCCCceEE
Confidence            9975543  33444 34699999999999999998865    47888873             23456788999999999


Q ss_pred             hcccCCCc-cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEe
Q psy10942        156 ALLGEEDS-HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       156 ~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~  232 (537)
                      +|+ |++. .|++++.++.    +                 ++||.       .+.++.  +.     +|  ...|.++ 
T Consensus       154 ~f~-p~~~~~l~s~s~D~~----v-----------------~lwd~-------~~~~~~~~l~-----~H--~~~V~~v-  196 (611)
T 1nr0_A          154 DFK-PSRPFRIISGSDDNT----V-----------------AIFEG-------PPFKFKSTFG-----EH--TKFVHSV-  196 (611)
T ss_dssp             EEC-SSSSCEEEEEETTSC----E-----------------EEEET-------TTBEEEEEEC-----CC--SSCEEEE-
T ss_pred             EEC-CCCCeEEEEEeCCCe----E-----------------EEEEC-------CCCeEeeeec-----cc--cCceEEE-
Confidence            999 5554 5788887777    9                 99998       766655  67     99  9999999 


Q ss_pred             ccCcccCCCeeeeccCCCcceeccccccCCCcccccc--------cccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        233 RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI--------FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                        +|+|+|++|++++.|+.|+  +|+...+.......        ....+..+..++..  .+|++++.|++|++||+.+
T Consensus       197 --~fspdg~~las~s~D~~i~--lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg--~~l~s~s~D~~v~lWd~~~  270 (611)
T 1nr0_A          197 --RYNPDGSLFASTGGDGTIV--LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG--TKIASASADKTIKIWNVAT  270 (611)
T ss_dssp             --EECTTSSEEEEEETTSCEE--EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS--SEEEEEETTSEEEEEETTT
T ss_pred             --EECCCCCEEEEEECCCcEE--EEECCCCcEeeeeccccccccccCCCEEEEEECCCC--CEEEEEeCCCeEEEEeCCC
Confidence              9999999999999999999  99987753211110        00111112222211  6899999999999999998


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------eEEEEecCCCCEEEEEcCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------LNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~l~~~~~d  374 (537)
                      ++....+..  ...+...+..+.|  +++.+++++.|+.+++||.. ....          +..+..++++.++++++.|
T Consensus       271 ~~~~~~~~~--~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~-~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D  345 (611)
T 1nr0_A          271 LKVEKTIPV--GTRIEDQQLGIIW--TKQALVSISANGFINFVNPE-LGSIDQVRYGHNKAITALSSSADGKTLFSADAE  345 (611)
T ss_dssp             TEEEEEEEC--CSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CceeeeecC--CCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCC-CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            876543311  1223445666777  67889999999999999987 3333          4445556789999999999


Q ss_pred             CcEEEEECCCCeeeeee-ccCCcceEEEEEec--------------------------------------------CCCc
Q psy10942        375 GLLKLWSIKTSTCVSTF-DKHALKIWTLAITK--------------------------------------------DENQ  409 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~--------------------------------------------~~~~  409 (537)
                      ++|++||+.+++....+ ..|...+.++.+++                                            ++..
T Consensus       346 ~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~  425 (611)
T 1nr0_A          346 GHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI  425 (611)
T ss_dssp             SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC
T ss_pred             CcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcE
Confidence            99999999998876655 45666666655544                                            3322


Q ss_pred             eEE--------------------eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEeecCCcceEEEEEecCCC
Q psy10942        410 IIT--------------------GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       410 ~~~--------------------~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~  467 (537)
                      ++.                    ..+.+++|+||+++|++|+.|+.|++||+.+++.  +.. .+|...|++++|+|+++
T Consensus       426 ~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~  504 (611)
T 1nr0_A          426 AVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGA  504 (611)
T ss_dssp             EEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSS
T ss_pred             EEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCC
Confidence            211                    1357899999999999999999999999987643  334 67999999999999999


Q ss_pred             EEEEEeCCCcEEEEECCC-CeeEEE--ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        468 QIVSTGADGLLKLWSIKT-STCVST--FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       468 ~l~s~~~dg~v~vwd~~~-~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|++++.|++|++|++.+ ++++..  +.+|...|           .++   +|+|||++|++++.|++|+||
T Consensus       505 ~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V-----------~~v---~fspdg~~lasgs~D~~v~lW  563 (611)
T 1nr0_A          505 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV-----------ACV---SWSPDNVRLATGSLDNSVIVW  563 (611)
T ss_dssp             EEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred             EEEEEcCCCCEEEEEcCCCCceeeeeeeeecccce-----------eEE---EECCCCCEEEEEECCCcEEEE
Confidence            999999999999999987 666543  34499999           999   999999999999999999999

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=8.7e-52  Score=418.02  Aligned_cols=430  Identities=23%  Similarity=0.308  Sum_probs=340.9

Q ss_pred             eeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942         40 RSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTAD  117 (537)
Q Consensus        40 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d  117 (537)
                      +.+. |..+|.++  .++|        ++++|++++.|+.|++||. +++++.++..| +.|.+++|+||+++||+++.|
T Consensus        10 ~~L~GH~~~V~~~--a~sp--------dg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d   78 (577)
T 2ymu_A           10 NRLEAHSSSVRGV--AFSP--------DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD   78 (577)
T ss_dssp             EEECCCSSCEEEE--EECT--------TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eEECCCCCcEEEE--EECC--------CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCC
Confidence            3454 67788888  5688        7789999999999999995 67888888866 699999999999999999999


Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc----------------CCcc---
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN----------------GGDL---  178 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~----------------~~~i---  178 (537)
                      ++|+|||...            +.+..+.+|...|.+++|+ |++++|++++.++..                ...+   
T Consensus        79 ~~i~vWd~~~------------~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~  145 (577)
T 2ymu_A           79 KTVKLWNRNG------------QLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV  145 (577)
T ss_dssp             SCEEEEETTS------------CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred             CEEEEEECCC------------CEEEEEECCCCCEEEEEEC-CCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence            9999999644            6778899999999999999 788888877655430                0000   


Q ss_pred             --------------cceeeccc---------------------CCC-------cchhhHHHHHHHHHhhhccccccc-cc
Q psy10942        179 --------------SGLVKLGA---------------------NRS-------HNEWFDKTFERILEAKFKQSSSQQ-KH  215 (537)
Q Consensus       179 --------------~~~~~~~~---------------------~~~-------~~~~~~~~wd~~~~~~~~~~~~~~-l~  215 (537)
                                    .+.+.++.                     .+.       ..+...++||.       ...... +.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-------~~~~~~~~~  218 (577)
T 2ymu_A          146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-------NGQLLQTLT  218 (577)
T ss_dssp             EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-------TSCEEEEEE
T ss_pred             eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-------CCcEEEEEe
Confidence                          00000000                     000       00111255654       332222 55


Q ss_pred             ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                           +|  ...|.++   +|+|++++|++++.|+.++  +|+...............+..+......  ..+++++.|+
T Consensus       219 -----~~--~~~v~~~---~~s~dg~~l~~~~~d~~i~--~w~~~~~~~~~~~~~~~~v~~v~~~~d~--~~l~~~~~d~  284 (577)
T 2ymu_A          219 -----GH--SSSVRGV---AFSPDGQTIASASDDKTVK--LWNRNGQLLQTLTGHSSSVNGVAFRPDG--QTIASASDDK  284 (577)
T ss_dssp             -----CC--SSCEEEE---EECTTSSCEEEEETTSCEE--EECTTSCEEEEECCCSSCEEEEEECTTS--SEEEEEETTS
T ss_pred             -----cC--CCCEEEE---EECCCCCEEEEEeCCCEEE--EEeCCCCEEEEEecCCCCEEEEEEcCCC--CEEEEEeCCC
Confidence                 89  9999999   9999999999999999999  9997542110000001111112221111  5899999999


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------ceeeEEEEecCCCCE
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG--------LKLLNVLRGHKKGTQ  367 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~  367 (537)
                      .|++|+.....      ...+.+|...|.+++|+|+++.|++++.|+.|++||+...        ...+..+...+++..
T Consensus       285 ~i~~w~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~  358 (577)
T 2ymu_A          285 TVKLWNRNGQL------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQT  358 (577)
T ss_dssp             CEEEEETTSCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EEEEEeCCCcE------EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCE
Confidence            99999976543      3456789999999999999999999999999999998732        122345566778999


Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe------------------------eeeEEEEcCC
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG------------------------GVWFVNFSPL  423 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------------~i~~~~~s~~  423 (537)
                      +++++.|+.+++||. +++.+..+..|...+.+++++|+++.++++                        .+.+++|+|+
T Consensus       359 l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d  437 (577)
T 2ymu_A          359 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD  437 (577)
T ss_dssp             EEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTT
T ss_pred             EEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCC
Confidence            999999999999995 677888899999999999999999988864                        4889999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccC
Q psy10942        424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSD  503 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~  503 (537)
                      +++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++++..+.+|...|    
T Consensus       438 ~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v----  511 (577)
T 2ymu_A          438 DQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV----  511 (577)
T ss_dssp             SSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE----
T ss_pred             CCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE----
Confidence            999999999999999996 56788899999999999999999999999999999999995 788999999999999    


Q ss_pred             CCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        504 SENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       504 ~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                             +++   +|+||+++|++++.||.|+||
T Consensus       512 -------~~l---~~s~dg~~l~s~~~dg~v~lw  535 (577)
T 2ymu_A          512 -------RGV---AFSPDGQTIASASDDKTVKLW  535 (577)
T ss_dssp             -------EEE---EECTTSSCEEEEETTSEEEEE
T ss_pred             -------EEE---EEcCCCCEEEEEECcCEEEEE
Confidence                   999   999999999999999999998

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.8e-52  Score=459.63  Aligned_cols=459  Identities=18%  Similarity=0.231  Sum_probs=372.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|++++|+  +++++|++++.||.|++||+.+++.+..+. +...+..+  .+.|..      +..++++++.|+.|++
T Consensus       658 ~~v~~~~~s--~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~--~~~~~~------~~~~l~sg~~d~~v~v  727 (1249)
T 3sfz_A          658 DEVLCCAFS--SDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCC--HFTNKS------NHLLLATGSNDFFLKL  727 (1249)
T ss_dssp             SCEEEEEEC--TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECSSS------SCCEEEEEETTSCEEE
T ss_pred             CCEEEEEEe--cCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE--EEecCC------CceEEEEEeCCCeEEE
Confidence            468999999  899999999999999999999999999886 55567777  556642      5568999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCccccc-------------------------
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERP-------------------------  135 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~-------------------------  135 (537)
                      ||+.+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.++.......                         
T Consensus       728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  807 (1249)
T 3sfz_A          728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS  807 (1249)
T ss_dssp             EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred             EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence            999999988888765 699999999999999999999999999998742110000                         


Q ss_pred             ------------------ccccceeEE-eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHH
Q psy10942        136 ------------------NKILKFRKQ-FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK  196 (537)
Q Consensus       136 ------------------~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  196 (537)
                                        ......... ..+|...+.+++|+ +++..+++++.++.    +                 +
T Consensus       808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~~~~dg~----v-----------------~  865 (1249)
T 3sfz_A          808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS-PYDHLAVIALSQYC----V-----------------E  865 (1249)
T ss_dssp             TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC-SSTTEEEEECSSSC----E-----------------E
T ss_pred             CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc-CCCCEEEEEeCCCe----E-----------------E
Confidence                              000011111 12566777778887 66677777666655    7                 9


Q ss_pred             HHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc---
Q psy10942        197 TFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV---  271 (537)
Q Consensus       197 ~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~---  271 (537)
                      +||.       .++...  +.     +|  ...|.++   +|+|+++++++++.|+.++  +|++............   
T Consensus       866 vwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~spdg~~l~s~s~dg~v~--vw~~~~~~~~~~~~~~~~~  926 (1249)
T 3sfz_A          866 LWNI-------DSRLKVADCR-----GH--LSWVHGV---MFSPDGSSFLTASDDQTIR--VWETKKVCKNSAIVLKQEI  926 (1249)
T ss_dssp             EEET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEEHHHHHSCCSSSEEEEE
T ss_pred             EEEc-------CCCceeeecC-----CC--ccceEEE---EECCCCCEEEEEeCCCeEE--EEEccccceeeeeccccee
Confidence            9999       776666  66     99  9999999   9999999999999999999  9997642110000000   


Q ss_pred             -----------------------------------cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        272 -----------------------------------PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       272 -----------------------------------~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                                                         .....+...  ..-..+++|+.+|.|++|++.++..     ...+
T Consensus       927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--p~g~~l~~g~~~g~i~i~d~~~~~~-----~~~~  999 (1249)
T 3sfz_A          927 DVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLS--PHLEYVAFGDEDGAIKIIELPNNRV-----FSSG  999 (1249)
T ss_dssp             EEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEEC--TTSSEEEEEETTSCCEEEETTTTSC-----EEEC
T ss_pred             eEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEc--CCCCEEEEEcCCCCEEEEEcCCCce-----eeec
Confidence                                               000000000  1116899999999999999998875     3445


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee---------eEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL---------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      .+|...|.+++|+|++++|++++.||.|++||+.. ...         +..+...+ +..+++++.|+.+++||+.+++.
T Consensus      1000 ~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A         1000 VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT-GDYVFLQAHQETVKDFRLLQ-DSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp             CCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT-TEEECCBCCSSCEEEEEECS-SSEEEEEESSSEEEEEETTTTCC
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CceEEEecCCCcEEEEEEcC-CCcEEEEECCCcEEEEECCCCce
Confidence            68999999999999999999999999999999983 332         33344444 55788999999999999999999


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEe-------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITG-------------------------GVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      ...+..|...+.+++++|++..++++                         .|.+++|+|++++|++++.||.|++||+.
T Consensus      1078 ~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A         1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp             CEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESS
T ss_pred             eEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            99999999999999999999988865                         48999999999999999999999999999


Q ss_pred             CceeeeEe---------ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        443 DYVCLKSL---------EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       443 ~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      +++.+..+         .+|.+.|++++|+|++++|++++  |.|++||+.+++.+..+..|...+           .++
T Consensus      1158 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i-----------~~~ 1224 (1249)
T 3sfz_A         1158 DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNL-----------KKI 1224 (1249)
T ss_dssp             SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCC-----------CCC
T ss_pred             CCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcc-----------cEE
Confidence            98877765         67889999999999999999885  899999999999999999999889           899


Q ss_pred             cceeeecCCCEEEEEeCCCCEEeC
Q psy10942        514 PRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                         +|+||+++|++++.||.|++|
T Consensus      1225 ---~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A         1225 ---HVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp             ---EECSSSCCEEEECTTCCEEEE
T ss_pred             ---EECCCCCEEEEecCCcEEEEE
Confidence               999999999999999999998

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=8.8e-52  Score=454.15  Aligned_cols=453  Identities=16%  Similarity=0.167  Sum_probs=384.0

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|+|++|+  +++++|++|+.||+|++||+.+++.+..+. +...+.++  .++|        ++.++++++.|+.|++
T Consensus       616 ~~v~~~~~s--~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~--~~s~--------~~~~l~s~~~d~~v~v  683 (1249)
T 3sfz_A          616 DAVYHACFS--QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC--AFSS--------DDSYIATCSADKKVKI  683 (1249)
T ss_dssp             SCEEEEEEC--TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE--EECT--------TSSEEEEEETTSEEEE
T ss_pred             ccEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEE--EEec--------CCCEEEEEeCCCeEEE
Confidence            479999999  899999999999999999999999999887 56677777  5688        6689999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEec--cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSS--VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      ||+.+++.+..+..| +.|.+++|+|  ++.++++++.|+.|++||+.+           .+....+.+|.+.|.+++|+
T Consensus       684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----------~~~~~~~~~h~~~v~~~~~s  752 (1249)
T 3sfz_A          684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----------KECRNTMFGHTNSVNHCRFS  752 (1249)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----------SSEEEEECCCSSCEEEEEEC
T ss_pred             EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----------cchhheecCCCCCEEEEEEe
Confidence            999999998888755 6999999999  556899999999999999999           68888999999999999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc--------ccccCCCcCeE
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT--------ERLGRDELKTV  228 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~--------~~~~h~~~~~v  228 (537)
                       ++++.+++++.++.    |                 ++||+       .++...  +...        ....+  ...+
T Consensus       753 -p~~~~l~s~s~dg~----v-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v  801 (1249)
T 3sfz_A          753 -PDDELLASCSADGT----L-----------------RLWDV-------RSANERKSINVKRFFLSSEDPPEDV--EVIV  801 (1249)
T ss_dssp             -SSTTEEEEEESSSE----E-----------------EEEEG-------GGTEEEEEEECCCCC--------CC--CCCB
T ss_pred             -cCCCEEEEEECCCe----E-----------------EEEeC-------CCCcccceecccccccccCCccccc--cceE
Confidence             78888888888777    9                 99998       655443  1100        00122  3478


Q ss_pred             EEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc--cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942        229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI--FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      .++   +|+|+|+.+++++ ++.+.  +|+...+.......  ....+..+..+...  ..+++++.|+.|++|++.++.
T Consensus       802 ~~~---~~s~dg~~l~~~~-~~~v~--~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~v~vwd~~~~~  873 (1249)
T 3sfz_A          802 KCC---SWSADGDKIIVAA-KNKVL--LFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--HLAVIALSQYCVELWNIDSRL  873 (1249)
T ss_dssp             CCC---CBCTTSSEEEEEE-TTEEE--EEETTTCCEEEEEECSSSSCCCEEEECSST--TEEEEECSSSCEEEEETTTTE
T ss_pred             EEE---EECCCCCEEEEEc-CCcEE--EEEecCCCceeEEcCCCCCceEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCc
Confidence            889   9999999999887 67899  99998754221110  00111222222222  689999999999999999887


Q ss_pred             eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC----------------------------------
Q psy10942        307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG----------------------------------  352 (537)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----------------------------------  352 (537)
                      .     ...+.+|...|.+++|+|+++.|++++.|+.|++|++...                                  
T Consensus       874 ~-----~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  948 (1249)
T 3sfz_A          874 K-----VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL  948 (1249)
T ss_dssp             E-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEE
T ss_pred             e-----eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEE
Confidence            6     3445789999999999999999999999999999997520                                  


Q ss_pred             ------------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe-------
Q psy10942        353 ------------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG-------  413 (537)
Q Consensus       353 ------------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------  413 (537)
                                  ...+..+..++++.++++++.+|.|++||+.+++....+..|...|.+++++|++..++++       
T Consensus       949 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A          949 IAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp             EEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEE
T ss_pred             EecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence                        1124455667789999999999999999999999999999999999999999999998875       


Q ss_pred             -----------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942        414 -----------------GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       414 -----------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  476 (537)
                                       .+.+++|+|++ .+++++.|+.|++||+.+++....+.+|.+.|.+++|+|++++|++++.|+
T Consensus      1029 vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A         1029 VWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp             EEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS
T ss_pred             EEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC
Confidence                             37889999966 567888999999999999999999999999999999999999999999999


Q ss_pred             cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        477 LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       477 ~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .|++||+.+++++..+.+|...|           +++   +|+|||++|++++.||.|++|
T Consensus      1108 ~v~iwd~~~~~~~~~l~~h~~~v-----------~~~---~~s~dg~~lat~~~dg~i~vw 1154 (1249)
T 3sfz_A         1108 TAKIWSFDLLSPLHELKGHNGCV-----------RCS---AFSLDGILLATGDDNGEIRIW 1154 (1249)
T ss_dssp             CCCEECSSSSSCSBCCCCCSSCE-----------EEE---EECSSSSEEEEEETTSCCCEE
T ss_pred             cEEEEECCCcceeeeeccCCCcE-----------EEE---EECCCCCEEEEEeCCCEEEEE
Confidence            99999999999999999999999           999   999999999999999999998

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=9.7e-51  Score=413.79  Aligned_cols=446  Identities=14%  Similarity=0.104  Sum_probs=350.7

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCcc----ceeeeec-cccc-cceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSR----KQLRSYP-AYES-LETCAVFHLSDETESKSGGKTFVLAGGEK   76 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~----~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (537)
                      ..|++++|+  |++++|++++ ++.|++||++++    +.+..+. +... +.++  .+.|..      +++++++++.|
T Consensus        19 ~~v~~~~~s--pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~--~~sp~~------~~~~l~s~~~d   87 (615)
T 1pgu_A           19 NFTTHLSYD--PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTV--KFSPIK------GSQYLCSGDES   87 (615)
T ss_dssp             TCCCCCEEE--TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEE--EECSST------TCCEEEEEETT
T ss_pred             CceeEEEEC--CCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEE--EECcCC------CCCEEEEecCC
Confidence            468999999  8999999998 788999999998    7777776 5566 7777  557610      34789999999


Q ss_pred             ceEEeeeccce--------ehhhhcCC-CcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccccccccceeE
Q psy10942         77 SLLHYYETSAV--------KELYQHGL-SSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        77 ~~i~~wd~~~~--------~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      |.|++||+.++        +.+..+.. ...|.+++|+|++++|++++.+    +.|++||  .           .+...
T Consensus        88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~-----------~~~~~  154 (615)
T 1pgu_A           88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--S-----------GNSLG  154 (615)
T ss_dssp             SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--T-----------CCEEE
T ss_pred             CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--C-----------CCcce
Confidence            99999999855        55666653 4699999999999999999987    7888888  4           45678


Q ss_pred             EeecchhhhhhhhcccCCCc-cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc
Q psy10942        144 QFVGFSDEILDIALLGEEDS-HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL  220 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~  220 (537)
                      .+.+|...|.+++|+ +++. .+++++.++.    +                 ++||.       .+.+..  +.     
T Consensus       155 ~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~----v-----------------~vwd~-------~~~~~~~~~~-----  200 (615)
T 1pgu_A          155 EVSGHSQRINACHLK-QSRPMRSMTVGDDGS----V-----------------VFYQG-------PPFKFSASDR-----  200 (615)
T ss_dssp             ECCSCSSCEEEEEEC-SSSSCEEEEEETTTE----E-----------------EEEET-------TTBEEEEEEC-----
T ss_pred             eeecCCccEEEEEEC-CCCCcEEEEEeCCCc----E-----------------EEEeC-------CCcceeeeec-----
Confidence            889999999999999 5555 6777777766    9                 99998       777666  66     


Q ss_pred             cCCCcC---eEEEEeccCcccC-CCeeeeccCCCcceeccccccCCCccccc-----ccccccceeeeeeCCcceEEEEE
Q psy10942        221 GRDELK---TVTLLERGKTVKE-EDLFPRQSMEPSTLEELEKRKTYHFPLFG-----IFVPEAEHGAFYTGGTVELLASG  291 (537)
Q Consensus       221 ~h~~~~---~v~~~~~~~~s~~-~~~l~~~~~d~~i~~~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~l~~~  291 (537)
                      +|  ..   .|.++   +|+|+ +++|++++.|+.++  +|++..+......     ....++..+... .  -..++++
T Consensus       201 ~~--~~~~~~v~~~---~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~--~~~l~~~  270 (615)
T 1pgu_A          201 TH--HKQGSFVRDV---EFSPDSGEFVITVGSDRKIS--CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D--SQKFATV  270 (615)
T ss_dssp             SS--SCTTCCEEEE---EECSTTCCEEEEEETTCCEE--EEETTTCCEEEECCBTTBCCCSCEEEEEES-S--SSEEEEE
T ss_pred             cc--CCCCceEEEE---EECCCCCCEEEEEeCCCeEE--EEECCCCCEeEEecccccccCCceEEEEEc-C--CCEEEEE
Confidence            88  88   99999   99999 99999999999999  9999875432221     111122233333 2  2589999


Q ss_pred             eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------
Q psy10942        292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------  363 (537)
Q Consensus       292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------  363 (537)
                      +.|+.|++||+.+++....+ ......+...+.++.|+ +++++++++.|+.|++||+. ..+.+..+..|.        
T Consensus       271 ~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~-~~~~~~~~~~~~~~v~~~~~  347 (615)
T 1pgu_A          271 GADATIRVWDVTTSKCVQKW-TLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG-HDEVLKTISGHNKGITALTV  347 (615)
T ss_dssp             ETTSEEEEEETTTTEEEEEE-ECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT-EEEEEEEECCCSSCEEEEET
T ss_pred             cCCCcEEEEECCCCcEEEEE-cCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC-CCcEEEEEeCCCCCEEEEEe
Confidence            99999999999988765433 22212335778888886 89999999999999999998 455555544332        


Q ss_pred             ----------------------------------CCCEEEEEcCCCcEEEEECCC-------------------------
Q psy10942        364 ----------------------------------KGTQIVSTGADGLLKLWSIKT-------------------------  384 (537)
Q Consensus       364 ----------------------------------~~~~l~~~~~d~~i~i~d~~~-------------------------  384 (537)
                                                        ++..+++++.|+.+++||+.+                         
T Consensus       348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  427 (615)
T 1pgu_A          348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD  427 (615)
T ss_dssp             TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred             cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence                                              255666666777777666543                         


Q ss_pred             ---------CeeeeeeccCCcceEEEEEecCCCceEE---------------------------eeeeEEEEcCCCCEEE
Q psy10942        385 ---------STCVSTFDKHALKIWTLAITKDENQIIT---------------------------GGVWFVNFSPLDRILI  428 (537)
Q Consensus       385 ---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~i~~~~~s~~~~~l~  428 (537)
                               ++.+..+. +...+.+++++  +..+++                           +.+.+++|+|++++|+
T Consensus       428 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  504 (615)
T 1pgu_A          428 DLLILQSFTGDIIKSVR-LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA  504 (615)
T ss_dssp             EEEEEETTTCCEEEEEE-CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE
T ss_pred             ceEEEeccCCceeeecc-cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEE
Confidence                     22222222 33344444444  222221                           2588999999999999


Q ss_pred             EEeCCCcEEEEECCCceeeeEeec-CCcceEEEEEec----------CCCEEEEEeCCCcEEEEECCCC-eeEEEecCCc
Q psy10942        429 SSSGDATIKLWCLTDYVCLKSLEG-HDASVLRCHFIN----------KGTQIVSTGADGLLKLWSIKTS-TCVSTFDKHA  496 (537)
Q Consensus       429 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~s~~~dg~v~vwd~~~~-~~~~~~~~~~  496 (537)
                      +++.||.|++||+.+++.+..+.+ |...|++++|+|          ++++|++++.||.|++||+.++ +++..+.+|.
T Consensus       505 ~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~  584 (615)
T 1pgu_A          505 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK  584 (615)
T ss_dssp             EEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST
T ss_pred             EcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCc
Confidence            999999999999999999999988 999999999999          9999999999999999999998 8889999999


Q ss_pred             cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        497 LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       497 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..|           .++   +|+|+++ |++++.||.|++|
T Consensus       585 ~~v-----------~~l---~~s~~~~-l~s~~~d~~v~iw  610 (615)
T 1pgu_A          585 DGV-----------NNL---LWETPST-LVSSGADACIKRW  610 (615)
T ss_dssp             TCE-----------EEE---EEEETTE-EEEEETTSCEEEE
T ss_pred             cce-----------EEE---EEcCCCC-eEEecCCceEEEE
Confidence            999           999   9999999 9999999999999

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.1e-51  Score=425.62  Aligned_cols=438  Identities=9%  Similarity=0.021  Sum_probs=333.2

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ..|+|++|+  |++++|++|+.||.|++||..+++....+++..++..+  .+.|        + ++|++++.|+.|++|
T Consensus        18 ~~V~~lafs--pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l--~fsp--------g-~~L~S~s~D~~v~lW   84 (902)
T 2oaj_A           18 SKPIAAAFD--FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEM--RFVK--------G-IYLVVINAKDTVYVL   84 (902)
T ss_dssp             SCEEEEEEE--TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEE--EEET--------T-TEEEEEETTCEEEEE
T ss_pred             CCcEEEEEC--CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEE--EEcC--------C-CEEEEEECcCeEEEE
Confidence            469999999  89999999999999999999988887777777778888  5566        3 389999999999999


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee-----------EEeecchhh
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR-----------KQFVGFSDE  151 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  151 (537)
                      |+.+++.+..+.+++.|.+++|+|++++|++|+.||.|++||+.++           .+.           ..+.+|.+.
T Consensus        85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-----------~~~~~~i~~~~~~~~~~~~h~~~  153 (902)
T 2oaj_A           85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-----------QLSSFKLDNLQKSSFFPAARLSP  153 (902)
T ss_dssp             ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-----------EEEEEEECCHHHHHTCSSSCCCC
T ss_pred             ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-----------ccccceeccccccccccccCCCC
Confidence            9999998888887789999999999999999999999999999883           321           234678899


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc------------
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT------------  217 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~------------  217 (537)
                      |.+++|+|.+...+++++.++.                      .+||+       ++.++.  +...            
T Consensus       154 V~sl~~sp~~~~~l~~g~~dg~----------------------vlWd~-------~~~~~~~~~~~~~~~g~~~~~~~~  204 (902)
T 2oaj_A          154 IVSIQWNPRDIGTVLISYEYVT----------------------LTYSL-------VENEIKQSFIYELPPFAPGGDFSE  204 (902)
T ss_dssp             CCEEEEETTEEEEEEEECSSCE----------------------EEEET-------TTTEEEEEECCCBCTTCCCSTTCC
T ss_pred             eEEEEEccCCCCEEEEEeCCCc----------------------EEEEC-------CCCceEEEEecccCCcCCCccccc
Confidence            9999999545567777766654                      46887       655544  2200            


Q ss_pred             -ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-------------------cccccee
Q psy10942        218 -ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-------------------VPEAEHG  277 (537)
Q Consensus       218 -~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-------------------~~~~~~~  277 (537)
                       ...+|  ...|.++   +|+|+|++|++++.|+.|+  +||+..+.......+                   ..++..+
T Consensus       205 ~~~~~h--~~~V~~v---~fspdg~~lasgs~Dg~i~--lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v  277 (902)
T 2oaj_A          205 KTNEKR--TPKVIQS---LYHPNSLHIITIHEDNSLV--FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKV  277 (902)
T ss_dssp             CTTSCB--CCCEEEE---EECTTSSEEEEEETTCCEE--EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEE
T ss_pred             cccccc--CCCeEEE---EEcCCCCEEEEEECCCeEE--EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEE
Confidence             11245  6789999   9999999999999999999  999987543211000                   0012222


Q ss_pred             eeeeCC---cceEEEEEeCC-----CeEEEEECCC------------------Cceeeeeeccccc-ccCCCeEEEEEcC
Q psy10942        278 AFYTGG---TVELLASGSLD-----KTVKVWSTTG------------------GLKLLNVLRGHKK-GHEKDINCVTVSP  330 (537)
Q Consensus       278 ~~~~~~---~v~~l~~~~~d-----~~i~i~~~~~------------------~~~~~~~~~~~~~-~~~~~v~~~~~s~  330 (537)
                      .+....   .-..+++|+.+     ..+.+|++..                  .+.     ...+. .+...|.++.+.+
T Consensus       278 ~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~  352 (902)
T 2oaj_A          278 YWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ-----MKIFPLPTNVPIVNILPIP  352 (902)
T ss_dssp             EEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE-----EEEECCSSSSCEEEEEECC
T ss_pred             EEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc-----eEEEecCCCCceEEEEECC
Confidence            332211   11467777665     3788888421                  111     11111 3567888998866


Q ss_pred             ----------CCCEEEEEeCCCcEEEEEccCCcee----------------eEEE-------------------------
Q psy10942        331 ----------NDKLLASGSLDKTVKVWSTTGGLKL----------------LNVL-------------------------  359 (537)
Q Consensus       331 ----------~~~~l~~~~~d~~i~i~d~~~~~~~----------------~~~~-------------------------  359 (537)
                                +...+++++.|+.|++||+..+...                +..+                         
T Consensus       353 ~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~  432 (902)
T 2oaj_A          353 RQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK  432 (902)
T ss_dssp             SSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC
T ss_pred             CCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc
Confidence                      3447888999999999998632111                1111                         


Q ss_pred             ---------EecCCCCEEEEEcCCCcEEEEECCCCeeee--eec---------cCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        360 ---------RGHKKGTQIVSTGADGLLKLWSIKTSTCVS--TFD---------KHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       360 ---------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~---------~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                               ..++++..+++++.|++|++||+.+++...  .+.         +|..                 .|.+++
T Consensus       433 G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~-----------------~V~sva  495 (902)
T 2oaj_A          433 GGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL-----------------AVDKIS  495 (902)
T ss_dssp             CSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC-----------------CEEEEE
T ss_pred             CCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCC-----------------ceeEEE
Confidence                     113457899999999999999999874210  010         2222                 789999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCc---------------------------------------------eeeeEeecCC
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDY---------------------------------------------VCLKSLEGHD  454 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~---------------------------------------------~~~~~~~~~~  454 (537)
                      |+||+++||+|+.||+|++||+.++                                             +++..+.+|.
T Consensus       496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~  575 (902)
T 2oaj_A          496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK  575 (902)
T ss_dssp             EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred             ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence            9999999999999999999998765                                             3467888999


Q ss_pred             cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE-----Eec-CCccceeccCCCCCCccccccceeee-----cCC-
Q psy10942        455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS-----TFD-KHALKIRNSDSENDHKGFGLPRQLCS-----RNS-  522 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~-----~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s-----~~~-  522 (537)
                      +.|++++||||| +||+|+.|++|++||++++..+.     .+. +|...|           +++   +|+     ||| 
T Consensus       576 ~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V-----------~sv---~Fs~~~~~~Dg~  640 (902)
T 2oaj_A          576 GKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACV-----------TCI---EFVIMEYGDDGY  640 (902)
T ss_dssp             CSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCE-----------EEE---EEEEEECTTSSS
T ss_pred             CcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccce-----------EEE---EEEEEecCCCCC
Confidence            999999999999 99999999999999998887664     232 788889           999   999     886 


Q ss_pred             --CEEEEEeCCCCEEeC
Q psy10942        523 --DCEYRGGWSPQVVVY  537 (537)
Q Consensus       523 --~~l~s~~~dg~i~vW  537 (537)
                        ++|++++.|++|++|
T Consensus       641 ~~~~l~sgs~D~tv~~w  657 (902)
T 2oaj_A          641 SSILMVCGTDMGEVITY  657 (902)
T ss_dssp             EEEEEEEEETTSEEEEE
T ss_pred             cceEEEEEecCCcEEEE
Confidence              899999999999998

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.1e-45  Score=376.53  Aligned_cols=419  Identities=13%  Similarity=0.091  Sum_probs=332.3

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce----ehhhhcCCC-cc-eEEEEEec--cccEEEEEe
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV----KELYQHGLS-SP-LVRIVRSS--VKRMYAVVT  115 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~----~~~~~~~~~-~~-v~~~~~s~--~~~~la~~~  115 (537)
                      +...+..+  .++|        +++++++++ ++.|++||+.++    +.+..+..| +. |.+++|+|  ++++||+++
T Consensus        17 ~~~~v~~~--~~sp--------dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~   85 (615)
T 1pgu_A           17 QRNFTTHL--SYDP--------TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD   85 (615)
T ss_dssp             CTTCCCCC--EEET--------TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE
T ss_pred             ccCceeEE--EECC--------CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec
Confidence            44556666  6688        667888877 789999999998    888888766 57 99999999  999999999


Q ss_pred             CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhH
Q psy10942        116 ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFD  195 (537)
Q Consensus       116 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  195 (537)
                      .|+.|++||+.++..   ...........+..|...|.+++|+ ++++++++++.+.+..+.|                 
T Consensus        86 ~dg~v~vw~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~~~~~~v-----------------  144 (615)
T 1pgu_A           86 ESGKVIVWGWTFDKE---SNSVEVNVKSEFQVLAGPISDISWD-FEGRRLCVVGEGRDNFGVF-----------------  144 (615)
T ss_dssp             TTSEEEEEEEEEEGG---GTEEEEEEEEEEECCSSCEEEEEEC-TTSSEEEEEECCSSCSEEE-----------------
T ss_pred             CCCEEEEEeCCCCcc---cccccccccchhhcccccEEEEEEe-CCCCEEEEeccCCCCccEE-----------------
Confidence            999999999975200   0000146777888899999999999 7888888888764333448                 


Q ss_pred             HHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCccccccc-cc-
Q psy10942        196 KTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIF-VP-  272 (537)
Q Consensus       196 ~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-~~-  272 (537)
                      .+||.       ......+.     +|  ...|.++   +|+|+++ .+++++.|+.++  +|+............ .. 
T Consensus       145 ~~~d~-------~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~l~~~~~d~~v~--vwd~~~~~~~~~~~~~~~~  205 (615)
T 1pgu_A          145 ISWDS-------GNSLGEVS-----GH--SQRINAC---HLKQSRPMRSMTVGDDGSVV--FYQGPPFKFSASDRTHHKQ  205 (615)
T ss_dssp             EETTT-------CCEEEECC-----SC--SSCEEEE---EECSSSSCEEEEEETTTEEE--EEETTTBEEEEEECSSSCT
T ss_pred             EEEEC-------CCcceeee-----cC--CccEEEE---EECCCCCcEEEEEeCCCcEE--EEeCCCcceeeeecccCCC
Confidence            88886       44333377     89  9999999   9999998 799999999999  999877432211110 11 


Q ss_pred             --ccceeeeeeC-CcceEEEEEeCCCeEEEEECCCCceeeeeecccc-c---ccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy10942        273 --EAEHGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK-K---GHEKDINCVTVSPNDKLLASGSLDKTVK  345 (537)
Q Consensus       273 --~~~~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~  345 (537)
                        .+..+..+.. .  +++++++.|+.|++||+.+++...     .+ .   .|...|.+++|+ ++++|++++.|+.|+
T Consensus       206 ~~~v~~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~  277 (615)
T 1pgu_A          206 GSFVRDVEFSPDSG--EFVITVGSDRKISCFDGKSGEFLK-----YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR  277 (615)
T ss_dssp             TCCEEEEEECSTTC--CEEEEEETTCCEEEEETTTCCEEE-----ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred             CceEEEEEECCCCC--CEEEEEeCCCeEEEEECCCCCEeE-----EecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence              1233333333 2  589999999999999999887643     23 4   789999999999 999999999999999


Q ss_pred             EEEccCCceeeEEEEecC-------------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC------
Q psy10942        346 VWSTTGGLKLLNVLRGHK-------------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD------  406 (537)
Q Consensus       346 i~d~~~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------  406 (537)
                      +||+. ..+.+..+..+.             ++..+++++.++.|++||+.+++.+..+..|...+.++.+ |+      
T Consensus       278 ~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~  355 (615)
T 1pgu_A          278 VWDVT-TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSY  355 (615)
T ss_dssp             EEETT-TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEET
T ss_pred             EEECC-CCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECC
Confidence            99999 666676666552             5789999999999999999998888888777776666665 43      


Q ss_pred             ---------------------------CCceEEe------------------eeeEEEEcCC------------------
Q psy10942        407 ---------------------------ENQIITG------------------GVWFVNFSPL------------------  423 (537)
Q Consensus       407 ---------------------------~~~~~~~------------------~i~~~~~s~~------------------  423 (537)
                                                 +..++++                  .+..++++|+                  
T Consensus       356 dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  435 (615)
T 1pgu_A          356 DGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSF  435 (615)
T ss_dssp             TSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETT
T ss_pred             CCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEecc
Confidence                                       3333322                  1223333333                  


Q ss_pred             --------------------CCEEEEEeC-CCcEEEEECCCceee-eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        424 --------------------DRILISSSG-DATIKLWCLTDYVCL-KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       424 --------------------~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                                          +++|++++. |+.|++||+.+++.. ..+.+|...|++++|+|++++|++++.||.|++|
T Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw  515 (615)
T 1pgu_A          436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLY  515 (615)
T ss_dssp             TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEe
Confidence                                677888888 999999999887665 6777899999999999999999999999999999


Q ss_pred             ECCCCeeEEEecC-CccceeccCCCCCCccccccceeeec----------CCCEEEEEeCCCCEEeC
Q psy10942        482 SIKTSTCVSTFDK-HALKIRNSDSENDHKGFGLPRQLCSR----------NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       482 d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~s~----------~~~~l~s~~~dg~i~vW  537 (537)
                      |+.+++.+..+.+ |...|           +++   +|+|          ++++|++++.||.|++|
T Consensus       516 ~~~~~~~~~~~~~~h~~~v-----------~~~---~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw  568 (615)
T 1pgu_A          516 DLQSREVKTSRWAFRTSKI-----------NAI---SWKPAEKGANEEEIEEDLVATGSLDTNIFIY  568 (615)
T ss_dssp             ETTTTEEEECCSCCCSSCE-----------EEE---EECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred             eCCCCcceeEeecCCCCce-----------eEE---EEcCccccccccccCCCEEEEEcCCCcEEEE
Confidence            9999999999988 99999           999   9999          99999999999999998

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-46  Score=393.74  Aligned_cols=428  Identities=10%  Similarity=0.054  Sum_probs=304.9

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ..|++++|+  + +++|++++.|++|++||+++++.+..+.+...+.++  .+.|        ++.++++++.||.|++|
T Consensus        59 ~~V~~l~fs--p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v--~~sp--------~g~~l~sgs~dg~V~lw  125 (902)
T 2oaj_A           59 SAIKEMRFV--K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSI--DTDA--------SLDWMLIGLQNGSMIVY  125 (902)
T ss_dssp             CCEEEEEEE--T-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEE--ECCT--------TCSEEEEEETTSCEEEE
T ss_pred             CCEEEEEEc--C-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEE--EECC--------CCCEEEEEcCCCcEEEE
Confidence            469999999  5 679999999999999999999999888766677777  5678        67899999999999999


Q ss_pred             eccceehh-----------hhcC-CCcceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc-
Q psy10942         83 ETSAVKEL-----------YQHG-LSSPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF-  148 (537)
Q Consensus        83 d~~~~~~~-----------~~~~-~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-  148 (537)
                      |+.+++..           ..+. +.+.|.+++|+|+ +..|++++.|+.| +||+.+           .+..+.+.+| 
T Consensus       126 d~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-----------~~~~~~~~~~~  193 (902)
T 2oaj_A          126 DIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-----------NEIKQSFIYEL  193 (902)
T ss_dssp             ETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-----------TEEEEEECCCB
T ss_pred             ECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-----------CceEEEEeccc
Confidence            99887653           2233 3369999999996 5789999999999 999998           5666666655 


Q ss_pred             -----------------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc
Q psy10942        149 -----------------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS  211 (537)
Q Consensus       149 -----------------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~  211 (537)
                                       ...|.+++|+ |++.+|++++.++.    |                 ++||+       .+++
T Consensus       194 ~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~----i-----------------~lWd~-------~~g~  244 (902)
T 2oaj_A          194 PPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNS----L-----------------VFWDA-------NSGH  244 (902)
T ss_dssp             CTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCC----E-----------------EEEET-------TTCC
T ss_pred             CCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCe----E-----------------EEEEC-------CCCc
Confidence                             4679999999 77888988888877    9                 99999       7665


Q ss_pred             cc-cc-ccccc-------------cCCCcCeEEEEeccCcc----cCC-CeeeeccCCC-----cceeccccccCC----
Q psy10942        212 QQ-KH-NTERL-------------GRDELKTVTLLERGKTV----KEE-DLFPRQSMEP-----STLEELEKRKTY----  262 (537)
Q Consensus       212 ~~-l~-~~~~~-------------~h~~~~~v~~~~~~~~s----~~~-~~l~~~~~d~-----~i~~~iw~~~~~----  262 (537)
                      +. .. .....             .|  ...|.++   +|+    |++ .++++|+.+.     .+.  +|++...    
T Consensus       245 ~~~~r~l~~~~~~~~~~~~~~~~~~~--~~~V~~v---~w~~~~~pd~~~ll~sg~~~~~~~~~~v~--~~~~~~~~~~~  317 (902)
T 2oaj_A          245 MIMARTVFETEINVPQPDYIRDSSTN--AAKISKV---YWMCENNPEYTSLLISHKSISRGDNQSLT--MIDLGYTPRYS  317 (902)
T ss_dssp             EEEEECSSCSCTTSCCTTCCCCCSSC--CCEEEEE---EEEECSSTTEEEEEEEEECSTTSSCCCEE--EEEEEECCCGG
T ss_pred             EEEEEeecccccCCCCCcCCCCCccc--cCCeeEE---EEEecCCCCCCEEEEeCCCCCCCCCceEE--EEecCCCCCcc
Confidence            54 11 00000             14  5589999   885    443 5677776652     677  7774310    


Q ss_pred             --------------Cccccccc--ccccceeeeee--C------CcceEEEEEeCCCeEEEEECCCCceeeee--ecc--
Q psy10942        263 --------------HFPLFGIF--VPEAEHGAFYT--G------GTVELLASGSLDKTVKVWSTTGGLKLLNV--LRG--  314 (537)
Q Consensus       263 --------------~~~~~~~~--~~~~~~~~~~~--~------~~v~~l~~~~~d~~i~i~~~~~~~~~~~~--~~~--  314 (537)
                                    ........  ......+....  .      ..-..+++++.|+.|++|++.++......  ...  
T Consensus       318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l  397 (902)
T 2oaj_A          318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL  397 (902)
T ss_dssp             GCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred             ccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcc
Confidence                          00000000  00000111000  0      00126788889999999999766432210  001  


Q ss_pred             --------------------------------cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------
Q psy10942        315 --------------------------------HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL---------  353 (537)
Q Consensus       315 --------------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------  353 (537)
                                                      .+.+|...+.+++|+|++++|++|+.|++|++||+....         
T Consensus       398 ~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~  477 (902)
T 2oaj_A          398 SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV  477 (902)
T ss_dssp             TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred             cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe
Confidence                                            123444455556668999999999999999999986321         


Q ss_pred             -----------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee-----------------eccCCcc--------
Q psy10942        354 -----------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST-----------------FDKHALK--------  397 (537)
Q Consensus       354 -----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-----------------~~~~~~~--------  397 (537)
                                 ..+..+..++++.+|++++.||+|++||+.+++....                 +......        
T Consensus       478 ~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  557 (902)
T 2oaj_A          478 NLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRA  557 (902)
T ss_dssp             EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGC
T ss_pred             echhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccC
Confidence                       2366777888999999999999999999987632100                 0000000        


Q ss_pred             -------eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee-----Eee-cCCcceEEEEEe-
Q psy10942        398 -------IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK-----SLE-GHDASVLRCHFI-  463 (537)
Q Consensus       398 -------i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~-~~~~~v~~~~~s-  463 (537)
                             ...+..-..    ..+.|++++||||| +||+|+.|++|++||+.++..+.     .+. +|.+.|++++|+ 
T Consensus       558 ~~~~~~g~~~~~~l~~----h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~  632 (902)
T 2oaj_A          558 PTGVRQGFMPSTAVHA----NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVI  632 (902)
T ss_dssp             CTTCSEEEEEEEEECC----CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEE
T ss_pred             CCCCCCccceeEEEEc----CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEE
Confidence                   000110000    12389999999999 99999999999999998877654     333 889999999999 


Q ss_pred             ----cCC---CEEEEEeCCCcEEEEEC---CCCeeEEEecCCc
Q psy10942        464 ----NKG---TQIVSTGADGLLKLWSI---KTSTCVSTFDKHA  496 (537)
Q Consensus       464 ----~~~---~~l~s~~~dg~v~vwd~---~~~~~~~~~~~~~  496 (537)
                          |||   ++|++++.|++|++||+   .+|+....+.+|.
T Consensus       633 ~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~  675 (902)
T 2oaj_A          633 MEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDIT  675 (902)
T ss_dssp             EECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEE
T ss_pred             EecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCce
Confidence                885   89999999999999999   7888888888774

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=4.9e-45  Score=383.91  Aligned_cols=438  Identities=13%  Similarity=0.149  Sum_probs=339.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|+|++|+  |++.+|++++.+|.|++||+.+++.+..+. +..++..+  .++|        +++++++++.||.|++
T Consensus        14 ~~v~~i~~s--p~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~--~~s~--------~~~~l~~~~~dg~i~v   81 (814)
T 3mkq_A           14 DRVKGIDFH--PTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAG--KFIA--------RKNWIIVGSDDFRIRV   81 (814)
T ss_dssp             SCEEEEEEC--SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE--EEEG--------GGTEEEEEETTSEEEE
T ss_pred             CceEEEEEC--CCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEE--EEeC--------CCCEEEEEeCCCeEEE
Confidence            469999999  899999999999999999999999998887 56677777  6688        6789999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      ||+.+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.++          ......+.+|...|.+++|+|.
T Consensus        82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~----------~~~~~~~~~~~~~v~~~~~~p~  151 (814)
T 3mkq_A           82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----------WALEQTFEGHEHFVMCVAFNPK  151 (814)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT----------SEEEEEEECCSSCEEEEEEETT
T ss_pred             EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC----------ceEEEEEcCCCCcEEEEEEEcC
Confidence            999999998888755 68999999999999999999999999999883          3677888999999999999954


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      ++..+++++.++.    |                 ++||+       ......  +.    ..+  ...+.++   +|+|
T Consensus       152 ~~~~l~~~~~dg~----v-----------------~vwd~-------~~~~~~~~~~----~~~--~~~v~~~---~~~~  194 (814)
T 3mkq_A          152 DPSTFASGCLDRT----V-----------------KVWSL-------GQSTPNFTLT----TGQ--ERGVNYV---DYYP  194 (814)
T ss_dssp             EEEEEEEEETTSE----E-----------------EEEET-------TCSSCSEEEE----CCC--TTCCCEE---EECC
T ss_pred             CCCEEEEEeCCCe----E-----------------EEEEC-------CCCcceeEEe----cCC--CCCEEEE---EEEE
Confidence            7788888887777    9                 99998       665554  33    134  5889999   9998


Q ss_pred             --CCCeeeeccCCCcceeccccccCCCcccccc-cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        239 --EEDLFPRQSMEPSTLEELEKRKTYHFPLFGI-FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       239 --~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                        ++.++++++.|+.++  +|++..+....... ....+..+..+...  ..+++++.||.|++||..+++.     ...
T Consensus       195 ~~~~~~l~~~~~dg~i~--~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~-----~~~  265 (814)
T 3mkq_A          195 LPDKPYMITASDDLTIK--IWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKIWNSSTYKV-----EKT  265 (814)
T ss_dssp             STTCCEEEEECTTSEEE--EEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEETTTCSE-----EEE
T ss_pred             CCCCCEEEEEeCCCEEE--EEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcE-----EEE
Confidence              999999999999999  99998743211110 00112222222222  5899999999999999998876     344


Q ss_pred             ccccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc---EEE------EECCC
Q psy10942        316 KKGHEKDINCVTVSPNDK--LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL---LKL------WSIKT  384 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~---i~i------~d~~~  384 (537)
                      +..|...+.+++|+|+++  +++++ .++.+.+|++.. ...  .+...+++..+++++.+..   +..      |++..
T Consensus       266 ~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (814)
T 3mkq_A          266 LNVGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGN-DEP--TLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQ  341 (814)
T ss_dssp             ECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSC-CSC--CEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCS
T ss_pred             eecCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCC-CCc--eeEECCCCCEEEECcccccceeeeeeeccccccccc
Confidence            567888999999999987  35544 567789999873 222  2333455666666554432   111      22222


Q ss_pred             Ceee----eeeccCCcceEEEEEecCCCceEE-------------------eeeeEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy10942        385 STCV----STFDKHALKIWTLAITKDENQIIT-------------------GGVWFVNFSPLDRILISSSGDATIKLWCL  441 (537)
Q Consensus       385 ~~~~----~~~~~~~~~i~~~~~~~~~~~~~~-------------------~~i~~~~~s~~~~~l~~~~~dg~i~i~d~  441 (537)
                      +...    ..+..+...+.+++++|+++.++.                   +.+.+++|+|+++++++++.+|.|++|+ 
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~-  420 (814)
T 3mkq_A          342 DEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK-  420 (814)
T ss_dssp             SSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEE-
T ss_pred             CccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEE-
Confidence            2222    223445556777778887776664                   3577899999999999999999999996 


Q ss_pred             CCceeeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceee
Q psy10942        442 TDYVCLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC  518 (537)
Q Consensus       442 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  518 (537)
                             .+.+|...+.+++|+|++   ++|++++.|+.|++||+.+++.+..+..|...+                 +|
T Consensus       421 -------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v-----------------~~  476 (814)
T 3mkq_A          421 -------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDV-----------------IW  476 (814)
T ss_dssp             -------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEEEE-----------------EE
T ss_pred             -------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCCEE-----------------EE
Confidence                   345688889999999998   688999999999999999999999988776544                 99


Q ss_pred             ecCCCEEEEE------eCCCCEEeC
Q psy10942        519 SRNSDCEYRG------GWSPQVVVY  537 (537)
Q Consensus       519 s~~~~~l~s~------~~dg~i~vW  537 (537)
                      +|||++|+++      +.++.+.+|
T Consensus       477 s~dg~~la~~~~~~~~~~~~~~~~~  501 (814)
T 3mkq_A          477 SDNGELVMIVNTNSNGDEASGYTLL  501 (814)
T ss_dssp             CTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred             cCCCCEEEEEEcCcccCCceEEEEE
Confidence            9999999999      555555443

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5e-44  Score=343.75  Aligned_cols=296  Identities=22%  Similarity=0.310  Sum_probs=246.8

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.+.|.+++|+|++++|++|+.|++|++||+.+           ++....+.+|.+.|.+++|+ +++++|++++.++. 
T Consensus       107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~-----------~~~~~~l~~h~~~V~~v~~~-~~~~~l~sgs~D~~-  173 (410)
T 1vyh_C          107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-----------GDFERTLKGHTDSVQDISFD-HSGKLLASCSADMT-  173 (410)
T ss_dssp             CSSCEEEEEECSSSSEEEEEESSSCEEEEETTT-----------CCCCEEECCCSSCEEEEEEC-TTSSEEEEEETTSC-
T ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CcEEEEEeccCCcEEEEEEc-CCCCEEEEEeCCCe-
Confidence            347999999999999999999999999999999           67888999999999999999 77888888888877 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         |                 ++||+       .+.++.  +.     +|  ...|.++   +|+|++++|++++.|+.|
T Consensus       174 ---i-----------------~iwd~-------~~~~~~~~~~-----~h--~~~V~~v---~~~p~~~~l~s~s~D~~i  216 (410)
T 1vyh_C          174 ---I-----------------KLWDF-------QGFECIRTMH-----GH--DHNVSSV---SIMPNGDHIVSASRDKTI  216 (410)
T ss_dssp             ---C-----------------CEEET-------TSSCEEECCC-----CC--SSCEEEE---EECSSSSEEEEEETTSEE
T ss_pred             ---E-----------------EEEeC-------CCCceeEEEc-----CC--CCCEEEE---EEeCCCCEEEEEeCCCeE
Confidence               9                 99999       777766  77     99  9999999   999999999998888888


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      +  +|++..+                                           ..     ...+.+|...|.++.++|++
T Consensus       217 ~--~wd~~~~-------------------------------------------~~-----~~~~~~h~~~v~~~~~~~~g  246 (410)
T 1vyh_C          217 K--MWEVQTG-------------------------------------------YC-----VKTFTGHREWVRMVRPNQDG  246 (410)
T ss_dssp             E--EEETTTC-------------------------------------------CE-----EEEEECCSSCEEEEEECTTS
T ss_pred             E--EEECCCC-------------------------------------------cE-----EEEEeCCCccEEEEEECCCC
Confidence            8  8877652                                           11     12235688889999999999


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      ++|++++.|+.|++||+. .......+                                ..|...+.++.++|++.....
T Consensus       247 ~~l~s~s~D~~v~vwd~~-~~~~~~~~--------------------------------~~h~~~v~~~~~~~~~~~~~~  293 (410)
T 1vyh_C          247 TLIASCSNDQTVRVWVVA-TKECKAEL--------------------------------REHRHVVECISWAPESSYSSI  293 (410)
T ss_dssp             SEEEEEETTSCEEEEETT-TCCEEEEE--------------------------------CCCSSCEEEEEECCSCGGGGG
T ss_pred             CEEEEEcCCCeEEEEECC-CCceeeEe--------------------------------cCCCceEEEEEEcCcccccch
Confidence            999999999999999988 44433333                                344455555555554332110


Q ss_pred             e---eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        413 G---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       413 ~---~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      .   ........+.+.+|++|+.|+.|++||+.+++++..+.+|...|++++|+|++++|++++.|+.|++||+.+++++
T Consensus       294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~  373 (410)
T 1vyh_C          294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  373 (410)
T ss_dssp             GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             hhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence            0   0111122234789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..+.+|...|           +++   +|+|++++|++++.||.|+||
T Consensus       374 ~~~~~h~~~v-----------~~l---~~~~~~~~l~sgs~D~~i~vW  407 (410)
T 1vyh_C          374 KTLNAHEHFV-----------TSL---DFHKTAPYVVTGSVDQTVKVW  407 (410)
T ss_dssp             EEEECCSSCE-----------EEE---EECSSSSCEEEEETTSEEEEE
T ss_pred             EEEcCCCCcE-----------EEE---EEcCCCCEEEEEeCCCcEEEE
Confidence            9999999999           999   999999999999999999999

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.6e-43  Score=328.28  Aligned_cols=281  Identities=20%  Similarity=0.287  Sum_probs=242.6

Q ss_pred             CCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942         95 LSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus        95 ~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                      +.+.|.+++|+|+    +++|++|+.|++|++|++..+.         ......+.+|...|.+++|+ +++..+++++.
T Consensus        31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~---------~~~~~~l~gh~~~v~~~~~~-~~~~~l~s~s~  100 (321)
T 3ow8_A           31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER---------LDLQWSLEGHQLGVVSVDIS-HTLPIAASSSL  100 (321)
T ss_dssp             SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE---------EEEEEEECCCSSCEEEEEEC-SSSSEEEEEET
T ss_pred             CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC---------eeeeeeeccCCCCEEEEEEC-CCCCEEEEEeC
Confidence            4479999999985    6689999999999999998721         23456789999999999999 77788888887


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                      ++.    |                 ++||+       .+++..  +.     .|  ...+.++   +|+|++++|++++.
T Consensus       101 D~~----i-----------------~lWd~-------~~~~~~~~~~-----~~--~~~~~~~---~~spdg~~l~~g~~  142 (321)
T 3ow8_A          101 DAH----I-----------------RLWDL-------ENGKQIKSID-----AG--PVDAWTL---AFSPDSQYLATGTH  142 (321)
T ss_dssp             TSE----E-----------------EEEET-------TTTEEEEEEE-----CC--TTCCCCE---EECTTSSEEEEECT
T ss_pred             CCc----E-----------------EEEEC-------CCCCEEEEEe-----CC--CccEEEE---EECCCCCEEEEEcC
Confidence            777    9                 99999       777766  66     78  8889999   99999999999998


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      |+.++  +|++..+.                                           .     ...+..|...|.+++|
T Consensus       143 dg~v~--i~~~~~~~-------------------------------------------~-----~~~~~~~~~~v~~~~~  172 (321)
T 3ow8_A          143 VGKVN--IFGVESGK-------------------------------------------K-----EYSLDTRGKFILSIAY  172 (321)
T ss_dssp             TSEEE--EEETTTCS-------------------------------------------E-----EEEEECSSSCEEEEEE
T ss_pred             CCcEE--EEEcCCCc-------------------------------------------e-----eEEecCCCceEEEEEE
Confidence            88888  88876621                                           1     1112345677999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      +|++++|++++.|+.|++||+. ..+.+..+..|..                                            
T Consensus       173 spdg~~lasg~~dg~i~iwd~~-~~~~~~~~~~h~~--------------------------------------------  207 (321)
T 3ow8_A          173 SPDGKYLASGAIDGIINIFDIA-TGKLLHTLEGHAM--------------------------------------------  207 (321)
T ss_dssp             CTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSS--------------------------------------------
T ss_pred             CCCCCEEEEEcCCCeEEEEECC-CCcEEEEEcccCC--------------------------------------------
Confidence            9999999999999999999998 5555555554433                                            


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                           .|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.++++
T Consensus       208 -----~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~  282 (321)
T 3ow8_A          208 -----PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC  282 (321)
T ss_dssp             -----CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             -----ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence                 788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +..+.+|...|           .++   +|+|++++|++++.||.|+||
T Consensus       283 ~~~~~~h~~~v-----------~~v---~~s~~g~~l~s~~~d~~i~vw  317 (321)
T 3ow8_A          283 VHTFFDHQDQV-----------WGV---KYNGNGSKIVSVGDDQEIHIY  317 (321)
T ss_dssp             EEEECCCSSCE-----------EEE---EECTTSSEEEEEETTCCEEEE
T ss_pred             EEEEcCCCCcE-----------EEE---EECCCCCEEEEEeCCCeEEEE
Confidence            99999999999           999   999999999999999999998

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.9e-42  Score=328.35  Aligned_cols=308  Identities=14%  Similarity=0.187  Sum_probs=253.8

Q ss_pred             ceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         77 SLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      ..+..|+..+..+...+.+| +.|.+++|+|++++||+|+.|++|++||+.+           .+....+..|...|.++
T Consensus        46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~-----------~~~~~~~~~h~~~v~~~  114 (380)
T 3iz6_a           46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT-----------SQKTHAIKLHCPWVMEC  114 (380)
T ss_dssp             GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT-----------TEEEEEEECCCTTCCCC
T ss_pred             ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CccceEEecCCCCEEEE
Confidence            34567777777778888866 6999999999999999999999999999998           67888999999999999


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEE
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~  231 (537)
                      +|+ |+++++++++.++.    +                 ++||+       ......    .....+.+|  .+.|.++
T Consensus       115 ~~s-~~g~~las~~~d~~----v-----------------~iw~~-------~~~~~~~~~~~~~~~~~gh--~~~v~~~  163 (380)
T 3iz6_a          115 AFA-PNGQSVACGGLDSA----C-----------------SIFNL-------SSQADRDGNMPVSRVLTGH--KGYASSC  163 (380)
T ss_dssp             EEC-TTSSEEEECCSSSC----C-----------------EEEEC-------CCCSSCCCSSTTCCBCCCC--SSCCCCC
T ss_pred             EEC-CCCCEEEEeeCCCc----E-----------------EEEEC-------CCCccccCCccceeeccCC--CcceEEE
Confidence            999 78889988888777    9                 99988       432110    001122399  9999999


Q ss_pred             eccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        232 ERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       232 ~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                         .|+|++ ..|++++.|+.++  +||+..+.                                .+..+.         
T Consensus       164 ---~~~~~~~~~l~s~s~D~~i~--~wd~~~~~--------------------------------~~~~~~---------  197 (380)
T 3iz6_a          164 ---QYVPDQETRLITGSGDQTCV--LWDVTTGQ--------------------------------RISIFG---------  197 (380)
T ss_dssp             ---BCCSSSSSCEEEECTTSCEE--EECTTTCC--------------------------------EEEEEC---------
T ss_pred             ---EEecCCCCEEEEECCCCcEE--EEEcCCCc--------------------------------EEEEee---------
Confidence               999874 5688999999999  89887731                                111111         


Q ss_pred             eecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        311 VLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                        .....+|...|.+++|+| ++++|++|+.|+.|++||++.....+..+..|..                         
T Consensus       198 --~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~-------------------------  250 (380)
T 3iz6_a          198 --SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG-------------------------  250 (380)
T ss_dssp             --CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS-------------------------
T ss_pred             --cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC-------------------------
Confidence              112246889999999987 8899999999999999999744444444444433                         


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc-------ceEEEEE
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA-------SVLRCHF  462 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~v~~~~~  462 (537)
                                              .|.+++|+|++++|++|+.|++|++||+.+++.+..+..+..       .|++++|
T Consensus       251 ------------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  306 (380)
T 3iz6_a          251 ------------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAF  306 (380)
T ss_dssp             ------------------------CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEE
T ss_pred             ------------------------CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEE
Confidence                                    788999999999999999999999999999998888765432       4899999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCeeEEEe----cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTCVSTF----DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|++++|++++.||.|++||+.+++.+..+    .+|...|           .++   +|+|||++|++|+.||.|+||
T Consensus       307 s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v-----------~~l---~~s~dg~~l~sgs~D~~i~iW  371 (380)
T 3iz6_a          307 SISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI-----------SCL---GLSSDGSALCTGSWDKNLKIW  371 (380)
T ss_dssp             CSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC-----------CEE---EECSSSSEEEEECTTSCEEEE
T ss_pred             CCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce-----------EEE---EECCCCCEEEEeeCCCCEEEE
Confidence            999999999999999999999999988777    6788889           899   999999999999999999999

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.9e-42  Score=316.30  Aligned_cols=277  Identities=20%  Similarity=0.262  Sum_probs=238.2

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.|.+++|+|++++|++++.|+.|++||+.+           ...++.+..|...|.+++|+ +++++|++++.++.   
T Consensus        14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~s~d~~---   78 (304)
T 2ynn_A           14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYET-----------QVEVRSIQVTETPVRAGKFI-ARKNWIIVGSDDFR---   78 (304)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEE-GGGTEEEEEETTSE---
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCC-----------CceeEEeeccCCcEEEEEEe-CCCCEEEEECCCCE---
Confidence            6899999999999999999999999999998           67888999999999999999 78888988888877   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||+       .+++..  +.     +|  ...|.++   +|+|++++|++++.|+.|+ 
T Consensus        79 -i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~sgs~D~~v~-  122 (304)
T 2ynn_A           79 -I-----------------RVFNY-------NTGEKVVDFE-----AH--PDYIRSI---AVHPTKPYVLSGSDDLTVK-  122 (304)
T ss_dssp             -E-----------------EEEET-------TTCCEEEEEE-----CC--SSCEEEE---EECSSSSEEEEEETTSCEE-
T ss_pred             -E-----------------EEEEC-------CCCcEEEEEe-----CC--CCcEEEE---EEcCCCCEEEEECCCCeEE-
Confidence             9                 99999       877766  77     99  9999999   9999999999999999999 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCC
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDK  333 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~  333 (537)
                       +|++..+.                                           ..    ...+.+|...|.+++|+| ++.
T Consensus       123 -lWd~~~~~-------------------------------------------~~----~~~~~~h~~~v~~v~~~p~~~~  154 (304)
T 2ynn_A          123 -LWNWENNW-------------------------------------------AL----EQTFEGHEHFVMCVAFNPKDPS  154 (304)
T ss_dssp             -EEEGGGTT-------------------------------------------EE----EEEECCCCSCEEEEEECTTCTT
T ss_pred             -EEECCCCc-------------------------------------------ch----hhhhcccCCcEEEEEECCCCCC
Confidence             99887521                                           00    123457888999999999 678


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      .|++++.|+.|++||+.. ......+..+                               +..                 
T Consensus       155 ~l~sgs~D~~v~iwd~~~-~~~~~~~~~~-------------------------------~~~-----------------  185 (304)
T 2ynn_A          155 TFASGCLDRTVKVWSLGQ-STPNFTLTTG-------------------------------QER-----------------  185 (304)
T ss_dssp             EEEEEETTSEEEEEETTC-SSCSEEEECC-------------------------------CTT-----------------
T ss_pred             EEEEEeCCCeEEEEECCC-CCccceeccC-------------------------------CcC-----------------
Confidence            999999999999999973 2222222111                               111                 


Q ss_pred             eeeEEEEcC--CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        414 GVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       414 ~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      .+..+.|+|  ++++|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++++|++++.||+|++||+.+++++..
T Consensus       186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~  265 (304)
T 2ynn_A          186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT  265 (304)
T ss_dssp             CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence            566667765  778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCccceeccCCCCCCccccccceeeecCCC--EEEEEeCCCCEE
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSD--CEYRGGWSPQVV  535 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~--~l~s~~~dg~i~  535 (537)
                      +..|...+           +++   +|+|+++  +|++++.||.+.
T Consensus       266 ~~~~~~~~-----------~~~---~~~~~~~~~~~asg~~~g~~~  297 (304)
T 2ynn_A          266 LNVGLERS-----------WCI---ATHPTGRKNYIASGFDNGFTV  297 (304)
T ss_dssp             ECCSSSSE-----------EEE---EECTTCGGGCEEEEETTEEEE
T ss_pred             ccCCCccE-----------EEE---EECCCCCceEEEEecCCceEE
Confidence            99999999           889   9999886  588888877654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.1e-42  Score=325.78  Aligned_cols=311  Identities=12%  Similarity=0.102  Sum_probs=224.2

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC------CceEEEEecccccCccccccccccee
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA------DHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      +++.++.+.....|++.....   ..+...|.+++|||||++||+++.      |+.|++|+..++...       ....
T Consensus        18 ~~~~~~g~~~~~~w~~p~~~p---~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-------~~~~   87 (357)
T 4g56_B           18 LYFQSNGSSKGSAWGRPVTAP---ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-------ESLC   87 (357)
T ss_dssp             -------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-------GGGC
T ss_pred             eEEecCCCccccccCCCCCCc---ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-------eeEe
Confidence            344444467789998865432   234468999999999999999997      788999998763211       2334


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG  221 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~  221 (537)
                      ....+|...|.+++|+ +++ .+++++.++.    |                 ++||+       .+++.. .......+
T Consensus        88 ~~~~~~~~~V~~~~~s-~d~-~~l~~s~dg~----v-----------------~lWd~-------~~~~~~~~~~~~~~~  137 (357)
T 4g56_B           88 TAGVQTEAGVTDVAWV-SEK-GILVASDSGA----V-----------------ELWEI-------LEKESLLVNKFAKYE  137 (357)
T ss_dssp             SEEEECSSCEEEEEEE-TTT-EEEEEETTSC----E-----------------EEC---------------CCCCEEECC
T ss_pred             cccCCCCCCEEEEEEc-CCC-CEEEEECCCE----E-----------------EEeec-------cccceeEEEeeccCC
Confidence            4556788889999999 554 4556666665    9                 99999       666554 22223348


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                      |  ...|.++   +|+|++++|++++.|+.|+  +|++..+                                       
T Consensus       138 h--~~~V~~v---~~spdg~~l~sgs~dg~v~--iwd~~~~---------------------------------------  171 (357)
T 4g56_B          138 H--DDIVKTL---SVFSDGTQAVSGGKDFSVK--VWDLSQK---------------------------------------  171 (357)
T ss_dssp             C--SSCEEEE---EECSSSSEEEEEETTSCEE--EEETTTT---------------------------------------
T ss_pred             C--CCCEEEE---EECCCCCEEEEEeCCCeEE--EEECCCC---------------------------------------
Confidence            9  9999999   9999999999999888888  8877652                                       


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                          +.     ...+..|...|.+++|+|++. ++++++.|+.|++||++ ..+....+..                   
T Consensus       172 ----~~-----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~-~~~~~~~~~~-------------------  222 (357)
T 4g56_B          172 ----AV-----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR-KPKPATRIDF-------------------  222 (357)
T ss_dssp             ----EE-----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT-SSSCBCBCCC-------------------
T ss_pred             ----cE-----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC-CCceeeeeee-------------------
Confidence                11     223457888999999999875 78899999999999987 3322221111                   


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR  459 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~  459 (537)
                                 ..+..                 .+.+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++
T Consensus       223 -----------~~~~~-----------------~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~  274 (357)
T 4g56_B          223 -----------CASDT-----------------IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG  274 (357)
T ss_dssp             -----------TTCCS-----------------CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred             -----------ccccc-----------------cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence                       11111                 6788899987 468999999999999999999999999999999999


Q ss_pred             EEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942        460 CHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       460 ~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~i~vW  537 (537)
                      ++|+|++ ++||+++.|++|+|||+++++++..+ +|...|           +++   +|+| |+++|+|++.||+|++|
T Consensus       275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V-----------~~v---afsP~d~~~l~s~s~Dg~v~iW  339 (357)
T 4g56_B          275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFV-----------TGV---AWSPLDHSKFTTVGWDHKVLHH  339 (357)
T ss_dssp             EEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCE-----------EEE---EECSSSTTEEEEEETTSCEEEE
T ss_pred             EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCE-----------EEE---EEeCCCCCEEEEEcCCCeEEEE
Confidence            9999987 58999999999999999999887655 899999           999   9998 89999999999999998

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=6.4e-42  Score=320.87  Aligned_cols=284  Identities=17%  Similarity=0.228  Sum_probs=242.3

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      .+..+++.+|.+.|.+++|+ +++++|++++.++.    |                 ++||.       .+++..  +. 
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s-~d~~~l~s~s~Dg~----v-----------------~iWd~-------~~~~~~~~~~-   94 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWG-TDSRLLLSASQDGK----L-----------------IIWDS-------YTTNKVHAIP-   94 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEEE-
T ss_pred             chhheeecCCCCceEEEEEC-CCCCEEEEEeCCCc----E-----------------EEEEC-------CCCCcceEee-
Confidence            45678899999999999999 78889988888877    9                 99998       776665  66 


Q ss_pred             cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-----eEEE
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-----ELLA  289 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-----~~l~  289 (537)
                          .|  ...|.++   +|+|++++|++++.|+.++  +|++.........     ...+.+|..  .++     ..++
T Consensus        95 ----~~--~~~v~~~---~~s~~~~~l~s~~~d~~v~--iw~~~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~l~  158 (340)
T 1got_B           95 ----LR--SSWVMTC---AYAPSGNYVACGGLDNICS--IYNLKTREGNVRV-----SRELAGHTGYLSCCRFLDDNQIV  158 (340)
T ss_dssp             ----CS--SSCEEEE---EECTTSSEEEEEETTCEEE--EEETTTCSBSCEE-----EEEEECCSSCEEEEEEEETTEEE
T ss_pred             ----cC--CccEEEE---EECCCCCEEEEEeCCCeEE--EEECccCCCccee-----EEEecCCCccEEEEEECCCCcEE
Confidence                88  9999999   9999999999999999999  9999875332222     233444443  111     4689


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                      +++.|+.|++||+.+++.     ...+.+|...|.+++|+|+++++++++.|+.|++||++ .......+..|..     
T Consensus       159 s~s~d~~i~~wd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~-~~~~~~~~~~h~~-----  227 (340)
T 1got_B          159 TSSGDTTCALWDIETGQQ-----TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHES-----  227 (340)
T ss_dssp             EEETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCSEEEEECCCSS-----
T ss_pred             EEECCCcEEEEECCCCcE-----EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeeEEEEcCCcC-----
Confidence            999999999999998876     34457899999999999999999999999999999998 4444444444433     


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS  449 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~  449 (537)
                                                                  .|.+++|+|++++|++|+.||.|++||+++++.+..
T Consensus       228 --------------------------------------------~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~  263 (340)
T 1got_B          228 --------------------------------------------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT  263 (340)
T ss_dssp             --------------------------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             --------------------------------------------CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence                                                        788999999999999999999999999999888777


Q ss_pred             eec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        450 LEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       450 ~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      +..  +...|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|           .++   +|+|++++|++
T Consensus       264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v-----------~~~---~~s~dg~~l~s  329 (340)
T 1got_B          264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV-----------SCL---GVTDDGMAVAT  329 (340)
T ss_dssp             ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECTTSSCEEE
T ss_pred             EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcE-----------EEE---EEcCCCCEEEE
Confidence            753  23479999999999999999999999999999999999999999999           999   99999999999


Q ss_pred             EeCCCCEEeC
Q psy10942        528 GGWSPQVVVY  537 (537)
Q Consensus       528 ~~~dg~i~vW  537 (537)
                      ++.||.|+||
T Consensus       330 ~s~D~~i~iW  339 (340)
T 1got_B          330 GSWDSFLKIW  339 (340)
T ss_dssp             EETTSCEEEE
T ss_pred             EcCCccEEec
Confidence            9999999999

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=8.7e-41  Score=311.94  Aligned_cols=274  Identities=18%  Similarity=0.148  Sum_probs=217.4

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcc--------cccc----cccccceeeeeeCCcceEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFP--------LFGI----FVPEAEHGAFYTGGTVELL  288 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~v~~l  288 (537)
                      .|  ...|.++   +|+|||++|++++ |++++  +|+.......        ..+.    ....+..+.+..+   +.+
T Consensus        28 ~~--~~~v~~~---~fs~dG~~l~~~s-d~~~r--~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~l   96 (344)
T 4gqb_B           28 CM--ERQLEAA---RYRSDGALLLGAS-SLSGR--CWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE---RGI   96 (344)
T ss_dssp             SC--CSEEEEE---EECTTSCEEEEEE-CCSSS--CCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT---TEE
T ss_pred             cc--cCCEEEE---EECCCCCEEEEEe-CCceE--EeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC---CeE
Confidence            56  7789999   9999999999887 78899  9984321000        0000    0001111222222   578


Q ss_pred             EEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----
Q psy10942        289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----  364 (537)
Q Consensus       289 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----  364 (537)
                      ++++.||+|++||+.+++..... .....+|...|++++|+|++++|++|+.|+.|++||+. .++.+..+..|..    
T Consensus        97 ~~~s~dg~v~lWd~~~~~~~~~~-~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-~~~~~~~~~~h~~~V~~  174 (344)
T 4gqb_B           97 LVASDSGAVELWELDENETLIVS-KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-QQVVLSSYRAHAAQVTC  174 (344)
T ss_dssp             EEEETTSEEEEEEECTTSSCEEE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEE
T ss_pred             EEEECCCEEEEEeccCCCceeEe-eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCcCCceEE
Confidence            99999999999999988764433 44556899999999999999999999999999999999 6777777766643    


Q ss_pred             ------C-CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcE
Q psy10942        365 ------G-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATI  436 (537)
Q Consensus       365 ------~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i  436 (537)
                            + ..+++++.|++|++||+++++....+..+...               ..+.+++|+|+ +++|++|+.||.|
T Consensus       175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~---------------~~~~~~~~~p~~~~~l~sg~~dg~v  239 (344)
T 4gqb_B          175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG---------------YLPTSLAWHPQQSEVFVFGDENGTV  239 (344)
T ss_dssp             EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C---------------CCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             EEecCCCCCceeeeccccccccccccccceeeeeecceee---------------ccceeeeecCCCCcceEEeccCCcE
Confidence                  4 57899999999999999999888776433211               05778889885 5789999999999


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                      ++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||+.+++++ .+.+|...|           +++  
T Consensus       240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V-----------~~v--  305 (344)
T 4gqb_B          240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFV-----------RDA--  305 (344)
T ss_dssp             EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCE-----------EEE--
T ss_pred             EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCE-----------EEE--
Confidence            999999999999999999999999999997 58999999999999999988765 578999999           999  


Q ss_pred             eeeecCCC-EEEEEeCCCCEEeC
Q psy10942        516 QLCSRNSD-CEYRGGWSPQVVVY  537 (537)
Q Consensus       516 ~~~s~~~~-~l~s~~~dg~i~vW  537 (537)
                       +|+|+++ +|++++.||+|++|
T Consensus       306 -~~sp~~~~llas~s~D~~v~~w  327 (344)
T 4gqb_B          306 -TWSPLNHSLLTTVGWDHQVVHH  327 (344)
T ss_dssp             -EECSSSTTEEEEEETTSCEEEE
T ss_pred             -EEeCCCCeEEEEEcCCCeEEEE
Confidence             9999987 56789999999998

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5e-42  Score=329.84  Aligned_cols=301  Identities=17%  Similarity=0.294  Sum_probs=248.9

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +..++.++  .+.|        ++.++++++.|+.|++||+.+++.+..+..| +.|.+++|+|++++|++|+.|++|++
T Consensus       107 h~~~V~~~--~~~p--------~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i  176 (410)
T 1vyh_C          107 HRSPVTRV--IFHP--------VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL  176 (410)
T ss_dssp             CSSCEEEE--EECS--------SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred             cCCcEEEE--EEcC--------CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            44566666  5677        6689999999999999999999999888866 69999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||+.+           .+.+..+.+|...|.+++|+ |+++++++++.++.    |                 ++||+  
T Consensus       177 wd~~~-----------~~~~~~~~~h~~~V~~v~~~-p~~~~l~s~s~D~~----i-----------------~~wd~--  221 (410)
T 1vyh_C          177 WDFQG-----------FECIRTMHGHDHNVSSVSIM-PNGDHIVSASRDKT----I-----------------KMWEV--  221 (410)
T ss_dssp             EETTS-----------SCEEECCCCCSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------EEEET--
T ss_pred             EeCCC-----------CceeEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCe----E-----------------EEEEC--
Confidence            99998           78889999999999999999 77888888888777    9                 99999  


Q ss_pred             Hhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        203 EAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       203 ~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                           .++.+.  +.     +|  ...|.++   .++|+++++++++.|+.++  +|++...                  
T Consensus       222 -----~~~~~~~~~~-----~h--~~~v~~~---~~~~~g~~l~s~s~D~~v~--vwd~~~~------------------  266 (410)
T 1vyh_C          222 -----QTGYCVKTFT-----GH--REWVRMV---RPNQDGTLIASCSNDQTVR--VWVVATK------------------  266 (410)
T ss_dssp             -----TTCCEEEEEE-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTC------------------
T ss_pred             -----CCCcEEEEEe-----CC--CccEEEE---EECCCCCEEEEEcCCCeEE--EEECCCC------------------
Confidence                 887766  66     99  9999999   9999999999999988888  8887652                  


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  360 (537)
                                               ..     ...+..|...|.+++|+|++.+.......+.             ....
T Consensus       267 -------------------------~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~  303 (410)
T 1vyh_C          267 -------------------------EC-----KAELREHRHVVECISWAPESSYSSISEATGS-------------ETKK  303 (410)
T ss_dssp             -------------------------CE-----EEEECCCSSCEEEEEECCSCGGGGGGGCCSC-------------C---
T ss_pred             -------------------------ce-----eeEecCCCceEEEEEEcCcccccchhhhccc-------------cccc
Confidence                                     11     1223567888999999997643211111010             0011


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      ....+.++++++.|+.|++||+++++++..+.+|..                 .|.+++|+|++++|++|+.|+.|++||
T Consensus       304 ~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-----------------~v~~v~~~~~g~~l~s~s~D~~i~vwd  366 (410)
T 1vyh_C          304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-----------------WVRGVLFHSGGKFILSCADDKTLRVWD  366 (410)
T ss_dssp             ----CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-----------------CEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred             cCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC-----------------cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            122467888888888888888888888888877775                 788889999999999999999999999


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      +.+++++..+.+|...|++++|+|++++|++++.||+|++|+++
T Consensus       367 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             CTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             CCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999863

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.7e-41  Score=318.04  Aligned_cols=288  Identities=14%  Similarity=0.151  Sum_probs=239.1

Q ss_pred             hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         91 YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        91 ~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ..+.+| +.|.+++|+|++++||+++.|++|++||..+           .+....+..|...|.+++|+ |++..+++++
T Consensus        58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~-----------~~~~~~~~~~~~~v~~~~~s-p~g~~lasg~  125 (354)
T 2pbi_B           58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT-----------TNKEHAVTMPCTWVMACAYA-PSGCAIACGG  125 (354)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCEEEEEECSSSCCCEEEEC-TTSSEEEEES
T ss_pred             EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC-----------CCcceEEecCCCCEEEEEEC-CCCCEEEEee
Confidence            344444 6899999999999999999999999999988           67778888899999999999 7888888888


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      .++.    +                 ++|++       ......   .....+.+|  ...|.++   +|+|++..|+++
T Consensus       126 ~d~~----i-----------------~v~~~-------~~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~l~t~  172 (354)
T 2pbi_B          126 LDNK----C-----------------SVYPL-------TFDKNENMAAKKKSVAMH--TNYLSAC---SFTNSDMQILTA  172 (354)
T ss_dssp             TTSE----E-----------------EEEEC-------CCCTTCCSGGGCEEEEEC--SSCEEEE---EECSSSSEEEEE
T ss_pred             CCCC----E-----------------EEEEE-------eccccccccccceeeecc--CCcEEEE---EEeCCCCEEEEE
Confidence            7776    8                 88876       322110   111122289  9999999   999999988888


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.|++++  +||+..+                                           +.     ...+.+|...|.++
T Consensus       173 s~D~~v~--lwd~~~~-------------------------------------------~~-----~~~~~~h~~~v~~~  202 (354)
T 2pbi_B          173 SGDGTCA--LWDVESG-------------------------------------------QL-----LQSFHGHGADVLCL  202 (354)
T ss_dssp             ETTSEEE--EEETTTC-------------------------------------------CE-----EEEEECCSSCEEEE
T ss_pred             eCCCcEE--EEeCCCC-------------------------------------------eE-----EEEEcCCCCCeEEE
Confidence            8888888  7777652                                           11     12235788889999


Q ss_pred             EEcC--CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        327 TVSP--NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       327 ~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +|+|  ++++|++++.|+.|++||++ ..+.+..+..|..                                        
T Consensus       203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~-~~~~~~~~~~h~~----------------------------------------  241 (354)
T 2pbi_B          203 DLAPSETGNTFVSGGCDKKAMVWDMR-SGQCVQAFETHES----------------------------------------  241 (354)
T ss_dssp             EECCCSSCCEEEEEETTSCEEEEETT-TCCEEEEECCCSS----------------------------------------
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEECC-CCcEEEEecCCCC----------------------------------------
Confidence            9987  56899999999999999988 4455554444433                                        


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                               .|.+++|+|++++|++++.|+.|++||++.++.+..+..+  ...+.+++|+|++++|++++.|+.|++||
T Consensus       242 ---------~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd  312 (354)
T 2pbi_B          242 ---------DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD  312 (354)
T ss_dssp             ---------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ---------CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence                     7889999999999999999999999999998877776643  34689999999999999999999999999


Q ss_pred             CCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        483 IKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       483 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +.+++.+..+.+|...|           +++   +|+|||++|++++.||.|+||
T Consensus       313 ~~~~~~~~~l~~h~~~v-----------~~l---~~spdg~~l~sgs~D~~v~vW  353 (354)
T 2pbi_B          313 VLKGSRVSILFGHENRV-----------STL---RVSPDGTAFCSGSWDHTLRVW  353 (354)
T ss_dssp             TTTCSEEEEECCCSSCE-----------EEE---EECTTSSCEEEEETTSEEEEE
T ss_pred             CCCCceEEEEECCCCcE-----------EEE---EECCCCCEEEEEcCCCCEEec
Confidence            99999999999999999           999   999999999999999999999

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-41  Score=328.98  Aligned_cols=343  Identities=14%  Similarity=0.134  Sum_probs=263.9

Q ss_pred             cceEEeeeccceehhhh-cCCCcceEEEEEecccc-EEEEEeCCceEEEEec----ccccCcccccccccceeEEeec--
Q psy10942         76 KSLLHYYETSAVKELYQ-HGLSSPLVRIVRSSVKR-MYAVVTADHNISLYRL----NSETGLEERPNKILKFRKQFVG--  147 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~-~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~~~~~--  147 (537)
                      ...+.+|++........ ..+.+.|.+++|+|+++ +||+++.|+.|++||+    .++...     ........+..  
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~   98 (425)
T 1r5m_A           24 NSIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-----WKLTIIAELRHPF   98 (425)
T ss_dssp             ----------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-----EEEEEEEEEECCC
T ss_pred             ccccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-----ccccccccccccc
Confidence            34456777765443322 23337999999999999 9999999999999999    763100     00002333333  


Q ss_pred             --------chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc
Q psy10942        148 --------FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE  218 (537)
Q Consensus       148 --------~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~  218 (537)
                              |.+.|.+++|+ +++++|++++.++.    |                 ++||.       ...... +.   
T Consensus        99 ~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~i~~~-------~~~~~~~~~---  146 (425)
T 1r5m_A           99 ALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGE----L-----------------RLWNK-------TGALLNVLN---  146 (425)
T ss_dssp             CCC------CBCEEEEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TSCEEEEEC---
T ss_pred             cccccccCCCCceEEEEEc-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCeeeecc---
Confidence                    67789999999 68888888887776    9                 99985       444333 67   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc----------------cceeeeeeC
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE----------------AEHGAFYTG  282 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~----------------~~~~~~~~~  282 (537)
                        +|  ...|.++   +|+|++++|++++.|+.++  +|++..+...........                ...+.....
T Consensus       147 --~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (425)
T 1r5m_A          147 --FH--RAPIVSV---KWNKDGTHIISMDVENVTI--LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD  217 (425)
T ss_dssp             --CC--CSCEEEE---EECTTSSEEEEEETTCCEE--EEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred             --CC--CccEEEE---EECCCCCEEEEEecCCeEE--EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence              89  9999999   9999999999999999999  999987532221111000                111122222


Q ss_pred             CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942        283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH  362 (537)
Q Consensus       283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  362 (537)
                         ..+++++.++.|++||+.+++.     ...+..|...|.+++|+|++++|++++.|+.|++||+. ..+.+..+..|
T Consensus       218 ---~~~~~~~~~g~i~~~d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~  288 (425)
T 1r5m_A          218 ---DKFVIPGPKGAIFVYQITEKTP-----TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG-NGNSQNCFYGH  288 (425)
T ss_dssp             ---TEEEEECGGGCEEEEETTCSSC-----SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS-SBSCSEEECCC
T ss_pred             ---CEEEEEcCCCeEEEEEcCCCce-----eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCccceEecCC
Confidence               5789999999999999998765     34456889999999999999999999999999999988 44444443333


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      ..                                                 .+.+++|+|++ ++++++.|+.|++||+.
T Consensus       289 ~~-------------------------------------------------~i~~~~~~~~~-~l~~~~~d~~i~i~d~~  318 (425)
T 1r5m_A          289 SQ-------------------------------------------------SIVSASWVGDD-KVISCSMDGSVRLWSLK  318 (425)
T ss_dssp             SS-------------------------------------------------CEEEEEEETTT-EEEEEETTSEEEEEETT
T ss_pred             Cc-------------------------------------------------cEEEEEECCCC-EEEEEeCCCcEEEEECC
Confidence            22                                                 78889999999 99999999999999999


Q ss_pred             CceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe--------------------eEEEecCCcc--cee
Q psy10942        443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST--------------------CVSTFDKHAL--KIR  500 (537)
Q Consensus       443 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~--------------------~~~~~~~~~~--~i~  500 (537)
                      +++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++                    .+..+..|..  .| 
T Consensus       319 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-  397 (425)
T 1r5m_A          319 QNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI-  397 (425)
T ss_dssp             TTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCE-
T ss_pred             CCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCce-
Confidence            999999999999999999999999999999999999999999888                    8899999976  88 


Q ss_pred             ccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        501 NSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                .++   +|+|++++|++++.||.|++|
T Consensus       398 ----------~~~---~~s~~~~~l~~~~~dg~i~iw  421 (425)
T 1r5m_A          398 ----------FDL---SWNCAGNKISVAYSLQEGSVV  421 (425)
T ss_dssp             ----------EEE---EECTTSSEEEEEESSSCCEEE
T ss_pred             ----------EEE---EccCCCceEEEEecCceEEEE
Confidence                      888   999999999999999999998

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.3e-41  Score=311.30  Aligned_cols=285  Identities=19%  Similarity=0.244  Sum_probs=239.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh--hhhcCCC-cceEEEEEeccccEEEEEeCCceE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE--LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNI  120 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i  120 (537)
                      +.+++.++  .+.|.    ...++.++++++.|+.|++||+.+++.  ...+.+| ..|.+++|+|++.++++++.|++|
T Consensus        31 H~~~V~~v--~~~~~----~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i  104 (321)
T 3ow8_A           31 HDDAIWSV--AWGTN----KKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI  104 (321)
T ss_dssp             SSSCEEEE--EEC-----------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred             CCCcEEEE--EEecC----CCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence            66778888  45652    111456899999999999999987653  3445555 689999999999999999999999


Q ss_pred             EEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHH
Q psy10942        121 SLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFER  200 (537)
Q Consensus       121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~  200 (537)
                      ++||+.+           ++.+..+..|...+.+++|+ |++++|++++.++.    +                 ++|++
T Consensus       105 ~lWd~~~-----------~~~~~~~~~~~~~~~~~~~s-pdg~~l~~g~~dg~----v-----------------~i~~~  151 (321)
T 3ow8_A          105 RLWDLEN-----------GKQIKSIDAGPVDAWTLAFS-PDSQYLATGTHVGK----V-----------------NIFGV  151 (321)
T ss_dssp             EEEETTT-----------TEEEEEEECCTTCCCCEEEC-TTSSEEEEECTTSE----E-----------------EEEET
T ss_pred             EEEECCC-----------CCEEEEEeCCCccEEEEEEC-CCCCEEEEEcCCCc----E-----------------EEEEc
Confidence            9999998           67888899999999999999 78888888887776    9                 99999


Q ss_pred             HHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceee
Q psy10942        201 ILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGA  278 (537)
Q Consensus       201 ~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~  278 (537)
                             ++++..  +.     .|  ...|.++   +|+|++++|++++.|+.|+  +||+..+                
T Consensus       152 -------~~~~~~~~~~-----~~--~~~v~~~---~~spdg~~lasg~~dg~i~--iwd~~~~----------------  196 (321)
T 3ow8_A          152 -------ESGKKEYSLD-----TR--GKFILSI---AYSPDGKYLASGAIDGIIN--IFDIATG----------------  196 (321)
T ss_dssp             -------TTCSEEEEEE-----CS--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTT----------------
T ss_pred             -------CCCceeEEec-----CC--CceEEEE---EECCCCCEEEEEcCCCeEE--EEECCCC----------------
Confidence                   766665  66     78  8899999   9999999999999888888  8877652                


Q ss_pred             eeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE
Q psy10942        279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       279 ~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  358 (537)
                                                 +.     ...+.+|..+|.+++|+|++++|++++.|+.|++||++ .......
T Consensus       197 ---------------------------~~-----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~-~~~~~~~  243 (321)
T 3ow8_A          197 ---------------------------KL-----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGT  243 (321)
T ss_dssp             ---------------------------EE-----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT-TCCEEEE
T ss_pred             ---------------------------cE-----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC-CcceeEE
Confidence                                       11     12235688889999999999999999999999999998 4455554


Q ss_pred             EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL  438 (537)
Q Consensus       359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i  438 (537)
                      +..|..                                                 .|.+++|+|++++|++++.|+.|++
T Consensus       244 ~~~h~~-------------------------------------------------~v~~~~~sp~~~~l~s~s~D~~v~i  274 (321)
T 3ow8_A          244 LSGHAS-------------------------------------------------WVLNVAFCPDDTHFVSSSSDKSVKV  274 (321)
T ss_dssp             ECCCSS-------------------------------------------------CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             EcCCCC-------------------------------------------------ceEEEEECCCCCEEEEEeCCCcEEE
Confidence            444433                                                 7889999999999999999999999


Q ss_pred             EECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ||+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||..
T Consensus       275 wd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          275 WDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             EeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999999999999999999999999999999999963

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.6e-42  Score=331.72  Aligned_cols=348  Identities=13%  Similarity=0.145  Sum_probs=262.8

Q ss_pred             cccceeeeEeecCccccccCCcEEEEEe----------CccceEEeeecccee---hhhhcCCCcceEEEEEeccccEEE
Q psy10942         46 ESLETCAVFHLSDETESKSGGKTFVLAG----------GEKSLLHYYETSAVK---ELYQHGLSSPLVRIVRSSVKRMYA  112 (537)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~wd~~~~~---~~~~~~~~~~v~~~~~s~~~~~la  112 (537)
                      +.+..+  .++|.       +..+++++          +.|+.|++||+.+++   .+..+.+.+.|.+++|+|++++|+
T Consensus        13 ~~v~~~--~~sp~-------g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~   83 (416)
T 2pm9_A           13 SRTATF--AWSHD-------KIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIA   83 (416)
T ss_dssp             EESCBC--CBCSS-------SSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEE
T ss_pred             hhcceE--eeCCC-------CCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEE
Confidence            345556  56784       44589999          889999999999886   455566668999999999999999


Q ss_pred             EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcch
Q psy10942        113 VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNE  192 (537)
Q Consensus       113 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~  192 (537)
                      +++.|+.|++||+.+...       ..+....+.+|...|.+++|+|.++.++++++.++.    |              
T Consensus        84 ~~~~dg~v~vw~~~~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~----v--------------  138 (416)
T 2pm9_A           84 GALDNGSLELYSTNEANN-------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE----I--------------  138 (416)
T ss_dssp             EEESSSCEEEECCSSTTS-------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC----E--------------
T ss_pred             EEccCCeEEEeecccccc-------cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe----E--------------
Confidence            999999999999987211       034778889999999999999544788888887776    9              


Q ss_pred             hhHHHHHHHHHhhhccccc------ccccccccccCCCcCeEEEEeccCcccC-CCeeeeccCCCcceeccccccCCCcc
Q psy10942        193 WFDKTFERILEAKFKQSSS------QQKHNTERLGRDELKTVTLLERGKTVKE-EDLFPRQSMEPSTLEELEKRKTYHFP  265 (537)
Q Consensus       193 ~~~~~wd~~~~~~~~~~~~------~~l~~~~~~~h~~~~~v~~~~~~~~s~~-~~~l~~~~~d~~i~~~iw~~~~~~~~  265 (537)
                         ++||+       .+.+      ..+......+|  ...|.++   +|+|+ +.+|++++.|+.++  +|++....  
T Consensus       139 ---~iwd~-------~~~~~~~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~~l~~~~~dg~v~--iwd~~~~~--  199 (416)
T 2pm9_A          139 ---FIWDM-------NKCTESPSNYTPLTPGQSMSS--VDEVISL---AWNQSLAHVFASAGSSNFAS--IWDLKAKK--  199 (416)
T ss_dssp             ---EBCBT-------TTTSSCTTTCCCBCCCCSCCS--SCCCCEE---EECSSCTTEEEEESSSSCEE--EEETTTTE--
T ss_pred             ---EEEEC-------CCCccccccccccccccccCC--CCCeeEE---EeCCCCCcEEEEEcCCCCEE--EEECCCCC--
Confidence               99999       6655      22221222378  8999999   99999 68899999999999  99887631  


Q ss_pred             cccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCC--
Q psy10942        266 LFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDK--  342 (537)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~--  342 (537)
                                                    .+..+...          ....+|...|.+++|+|++ .++++++.|+  
T Consensus       200 ------------------------------~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  239 (416)
T 2pm9_A          200 ------------------------------EVIHLSYT----------SPNSGIKQQLSVVEWHPKNSTRVATATGSDND  239 (416)
T ss_dssp             ------------------------------EEEEECCC----------CCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred             ------------------------------cceEEecc----------ccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence                                          01111111          1113457889999999997 6899999998  


Q ss_pred             -cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942        343 -TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS  421 (537)
Q Consensus       343 -~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s  421 (537)
                       .|++||++....++..+.                               ..|..                 .+.+++|+
T Consensus       240 ~~i~~~d~~~~~~~~~~~~-------------------------------~~~~~-----------------~v~~~~~s  271 (416)
T 2pm9_A          240 PSILIWDLRNANTPLQTLN-------------------------------QGHQK-----------------GILSLDWC  271 (416)
T ss_dssp             CCCCEEETTSTTSCSBCCC-------------------------------SCCSS-----------------CEEEEEEC
T ss_pred             ceEEEEeCCCCCCCcEEee-------------------------------cCccC-----------------ceeEEEeC
Confidence             999999884323322222                               03332                 78889999


Q ss_pred             C-CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecC-----
Q psy10942        422 P-LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDK-----  494 (537)
Q Consensus       422 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~-----  494 (537)
                      | ++++|++++.|+.|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.......     
T Consensus       272 ~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~  351 (416)
T 2pm9_A          272 HQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ  351 (416)
T ss_dssp             SSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred             CCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence            9 89999999999999999999999999999999999999999998 8999999999999999987654332211     


Q ss_pred             ---------------CccceeccCC----CCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        495 ---------------HALKIRNSDS----ENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       495 ---------------~~~~i~~~~~----~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                     |...+.....    .......++   +|+|||++|++++.|+.|+||
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~dg~~la~~~~d~~v~~w  410 (416)
T 2pm9_A          352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAA---HWAFGGKLVQITPDGKGVSIT  410 (416)
T ss_dssp             ---------------CCSCCCSSCCCCCSTTCCCSCCC---EEETTTEEECBCTTSSCBCCB
T ss_pred             cCCcccccccccccccccccccccccCCccccCCccce---EEeeCCeEEEEeCCCCeEEEE
Confidence                           1111100000    001111466   999999999999999999999

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.7e-40  Score=349.26  Aligned_cols=398  Identities=13%  Similarity=0.154  Sum_probs=307.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +...+.++  .++|        +++++++++.+|.|++||+.+++.+..+..+ +.|.+++|+|++++||+++.|+.|++
T Consensus        12 h~~~v~~i--~~sp--------~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v   81 (814)
T 3mkq_A           12 RSDRVKGI--DFHP--------TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV   81 (814)
T ss_dssp             ECSCEEEE--EECS--------SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred             CCCceEEE--EECC--------CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence            55667777  6688        6789999999999999999999988888755 69999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||+.+           ++.+..+.+|.+.|.+++|+ +++..|++++.++.    |                 ++||+  
T Consensus        82 w~~~~-----------~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~vw~~--  126 (814)
T 3mkq_A           82 FNYNT-----------GEKVVDFEAHPDYIRSIAVH-PTKPYVLSGSDDLT----V-----------------KLWNW--  126 (814)
T ss_dssp             EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------EEEEG--
T ss_pred             EECCC-----------CcEEEEEecCCCCEEEEEEe-CCCCEEEEEcCCCE----E-----------------EEEEC--
Confidence            99998           68888999999999999999 78888888887776    9                 99998  


Q ss_pred             Hhhhcccc-ccc--ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccc--cccce
Q psy10942        203 EAKFKQSS-SQQ--KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEH  276 (537)
Q Consensus       203 ~~~~~~~~-~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~  276 (537)
                           .+. ...  +.     +|  ...|.++   +|+| +++.+++++.||.++  +|++............  .....
T Consensus       127 -----~~~~~~~~~~~-----~~--~~~v~~~---~~~p~~~~~l~~~~~dg~v~--vwd~~~~~~~~~~~~~~~~~v~~  189 (814)
T 3mkq_A          127 -----ENNWALEQTFE-----GH--EHFVMCV---AFNPKDPSTFASGCLDRTVK--VWSLGQSTPNFTLTTGQERGVNY  189 (814)
T ss_dssp             -----GGTSEEEEEEE-----CC--SSCEEEE---EEETTEEEEEEEEETTSEEE--EEETTCSSCSEEEECCCTTCCCE
T ss_pred             -----CCCceEEEEEc-----CC--CCcEEEE---EEEcCCCCEEEEEeCCCeEE--EEECCCCcceeEEecCCCCCEEE
Confidence                 665 322  66     89  9999999   9999 889999999999999  9999775432221111  12223


Q ss_pred             eeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee
Q psy10942        277 GAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL  356 (537)
Q Consensus       277 ~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~  356 (537)
                      +..+....-..+++++.||.|++||+.+++.     ...+..|...|.+++|+|+++++++++.||.|++||+. ..+.+
T Consensus       190 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~~  263 (814)
T 3mkq_A          190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSC-----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS-TYKVE  263 (814)
T ss_dssp             EEECCSTTCCEEEEECTTSEEEEEETTTTEE-----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCSEE
T ss_pred             EEEEECCCCCEEEEEeCCCEEEEEECCCCcE-----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCcEE
Confidence            3333311226899999999999999998875     34456789999999999999999999999999999998 44444


Q ss_pred             EEE----------EecCCCCE-EEEEcCCCcEEEEECCCCeeeeeeccCCcceEE------------EEEe-----cCCC
Q psy10942        357 NVL----------RGHKKGTQ-IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT------------LAIT-----KDEN  408 (537)
Q Consensus       357 ~~~----------~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~------------~~~~-----~~~~  408 (537)
                      ..+          ..++++.. +++.+.++.+.+|++........+......+..            ....     ..+.
T Consensus       264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (814)
T 3mkq_A          264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDE  343 (814)
T ss_dssp             EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSS
T ss_pred             EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCc
Confidence            443          44555543 355556777899998766544433322111110            0000     0000


Q ss_pred             ce---------EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        409 QI---------ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       409 ~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                      .+         ....+.+++|+|+|+++++++ ++.+.+|++......     +.+.+.+++|+|+++++++++.+|.|+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~  417 (814)
T 3mkq_A          344 PLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIK  417 (814)
T ss_dssp             CBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEE
T ss_pred             cceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEE
Confidence            00         011478999999999999998 899999998764432     346788999999999999999999999


Q ss_pred             EEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCC---CEEEEEeCCCCEEeC
Q psy10942        480 LWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS---DCEYRGGWSPQVVVY  537 (537)
Q Consensus       480 vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~---~~l~s~~~dg~i~vW  537 (537)
                      +|+        .+.+|...+           ..+   +|+|++   ++|++++.|+.|++|
T Consensus       418 l~~--------~~~~~~~~v-----------~~~---~~s~dg~~~~~l~~~~~d~~v~~~  456 (814)
T 3mkq_A          418 YYK--------NFKEVTSWS-----------VPM---HSAIDRLFSGALLGVKSDGFVYFF  456 (814)
T ss_dssp             EEE--------TTEECTTCC-----------CCC---SSCCCEEECSSSEEEEETTEEEEE
T ss_pred             EEE--------CCCCccceE-----------EcC---CcCccceecceEEEEecCCEEEEE
Confidence            996        334567777           888   999999   688999999999998

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.7e-41  Score=323.03  Aligned_cols=324  Identities=14%  Similarity=0.174  Sum_probs=257.4

Q ss_pred             cceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEE
Q psy10942         25 DKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRI  102 (537)
Q Consensus        25 ~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~  102 (537)
                      +..+..|+.......+.+. +..++.++  .+.|        ++++|++++.|+.|++||+.+++.+..+..| ..|.++
T Consensus        45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~--~~sp--------~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~  114 (380)
T 3iz6_a           45 GRTAVSFNPTDLVCCRTLQGHSGKVYSL--DWTP--------EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMEC  114 (380)
T ss_dssp             GGGCCCCCCCCCEEEEEECCCSSCEEEE--EECT--------TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred             cccccccccceeEEeecccccccEEEEE--EEcC--------CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEE
Confidence            3445567777777777776 56677877  5688        6689999999999999999999988888766 689999


Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccccee
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV  182 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~  182 (537)
                      +|+|+|++||+++.|+.+++||+.+...    ........+.+.+|.+.|.+++|.|.++..|++++.++.    |    
T Consensus       115 ~~s~~g~~las~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~----i----  182 (380)
T 3iz6_a          115 AFAPNGQSVACGGLDSACSIFNLSSQAD----RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT----C----  182 (380)
T ss_dssp             EECTTSSEEEECCSSSCCEEEECCCCSS----CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC----E----
T ss_pred             EECCCCCEEEEeeCCCcEEEEECCCCcc----ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc----E----
Confidence            9999999999999999999999976311    111134556788999999999999666777888888777    9    


Q ss_pred             ecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccc
Q psy10942        183 KLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKR  259 (537)
Q Consensus       183 ~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~  259 (537)
                                   ++||+       .+++..  +......+|  ...|.++   +|++ ++++|++|+.|+.|+  +||+
T Consensus       183 -------------~~wd~-------~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~~l~sgs~D~~v~--~wd~  235 (380)
T 3iz6_a          183 -------------VLWDV-------TTGQRISIFGSEFPSGH--TADVLSL---SINSLNANMFISGSCDTTVR--LWDL  235 (380)
T ss_dssp             -------------EEECT-------TTCCEEEEECCCSSSSC--CSCEEEE---EECSSSCCEEEEEETTSCEE--EEET
T ss_pred             -------------EEEEc-------CCCcEEEEeecccCCCC--ccCeEEE---EeecCCCCEEEEEECCCeEE--EEEC
Confidence                         99999       777665  322222488  8999999   8876 778888888888888  7777


Q ss_pred             cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe
Q psy10942        260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS  339 (537)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  339 (537)
                      ....                                          ..     ...+.+|...|.+++|+|++++|++++
T Consensus       236 ~~~~------------------------------------------~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s  268 (380)
T 3iz6_a          236 RITS------------------------------------------RA-----VRTYHGHEGDINSVKFFPDGQRFGTGS  268 (380)
T ss_dssp             TTTC------------------------------------------CC-----CEEECCCSSCCCEEEECTTSSEEEEEC
T ss_pred             CCCC------------------------------------------cc-----eEEECCcCCCeEEEEEecCCCeEEEEc
Confidence            5410                                          11     223467889999999999999999999


Q ss_pred             CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        340 LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       340 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                      .|++|++||++ ....+..+..++..                         ...+.                 ..+.+++
T Consensus       269 ~D~~i~lwd~~-~~~~~~~~~~~~~~-------------------------~~~~~-----------------~~v~~~~  305 (380)
T 3iz6_a          269 DDGTCRLFDMR-TGHQLQVYNREPDR-------------------------NDNEL-----------------PIVTSVA  305 (380)
T ss_dssp             SSSCEEEEETT-TTEEEEEECCCCSS-------------------------SCCSS-----------------CSCSEEE
T ss_pred             CCCeEEEEECC-CCcEEEEecccccc-------------------------ccccc-----------------CceEEEE
Confidence            99999999999 55555554433220                         00000                 0578899


Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCceeeeEe----ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYVCLKSL----EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      |+|++++|++|+.||.|++||+.+++.+..+    .+|.+.|++++|+|++++|++|+.|++|++|++...+
T Consensus       306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            9999999999999999999999998888777    6799999999999999999999999999999987653

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2.5e-40  Score=310.04  Aligned_cols=288  Identities=20%  Similarity=0.285  Sum_probs=239.9

Q ss_pred             eeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942         40 RSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTAD  117 (537)
Q Consensus        40 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d  117 (537)
                      ..+. +..++.++  .+.|        +++++++++.||.|++||+.+++.+..+..+ ..|.+++|+|++++||+++.|
T Consensus        49 ~~l~gH~~~v~~~--~~s~--------d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  118 (340)
T 1got_B           49 RTLRGHLAKIYAM--HWGT--------DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD  118 (340)
T ss_dssp             EEECCCSSCEEEE--EECT--------TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeecCCCCceEEE--EECC--------CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence            3444 55677777  5577        6789999999999999999999888877755 589999999999999999999


Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      +.|++|++.+...       .......+.+|.+.|.++.|+ +++ .+++++.++.    |                 ++
T Consensus       119 ~~v~iw~~~~~~~-------~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~d~~----i-----------------~~  168 (340)
T 1got_B          119 NICSIYNLKTREG-------NVRVSRELAGHTGYLSCCRFL-DDN-QIVTSSGDTT----C-----------------AL  168 (340)
T ss_dssp             CEEEEEETTTCSB-------SCEEEEEEECCSSCEEEEEEE-ETT-EEEEEETTSC----E-----------------EE
T ss_pred             CeEEEEECccCCC-------cceeEEEecCCCccEEEEEEC-CCC-cEEEEECCCc----E-----------------EE
Confidence            9999999987311       134567888999999999998 444 4777777766    9                 99


Q ss_pred             HHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      ||+       ++++..  +.     +|  ...|.++   +|+|+++++++++.|+.++  +||+..+             
T Consensus       169 wd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~sg~~d~~v~--~wd~~~~-------------  216 (340)
T 1got_B          169 WDI-------ETGQQTTTFT-----GH--TGDVMSL---SLAPDTRLFVSGACDASAK--LWDVREG-------------  216 (340)
T ss_dssp             EET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTC-------------
T ss_pred             EEC-------CCCcEEEEEc-----CC--CCceEEE---EECCCCCEEEEEeCCCcEE--EEECCCC-------------
Confidence            999       777766  66     99  9999999   9999999999999998888  8887652             


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL  355 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  355 (537)
                                                    ..     ...+.+|...|.+++|+|++++|++++.|+.|++||++ ..+.
T Consensus       217 ------------------------------~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~-~~~~  260 (340)
T 1got_B          217 ------------------------------MC-----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR-ADQE  260 (340)
T ss_dssp             ------------------------------SE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEE
T ss_pred             ------------------------------ee-----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC-CCcE
Confidence                                          11     12235688899999999999999999999999999998 4443


Q ss_pred             eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942        356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT  435 (537)
Q Consensus       356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  435 (537)
                      +..+..+.                              +..                 .+.+++|+|++++|++|+.|+.
T Consensus       261 ~~~~~~~~------------------------------~~~-----------------~v~~~~~s~~g~~l~~g~~d~~  293 (340)
T 1got_B          261 LMTYSHDN------------------------------IIC-----------------GITSVSFSKSGRLLLAGYDDFN  293 (340)
T ss_dssp             EEEECCTT------------------------------CCS-----------------CEEEEEECTTSSEEEEEETTSE
T ss_pred             EEEEccCC------------------------------ccc-----------------ceEEEEECCCCCEEEEECCCCe
Confidence            33322110                              000                 6889999999999999999999


Q ss_pred             EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        436 IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       436 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      |++||+.+++.+..+.+|.+.|.+++|+|++.+|++++.|+.|++||
T Consensus       294 i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            99999999999999999999999999999999999999999999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-40  Score=319.89  Aligned_cols=317  Identities=12%  Similarity=0.085  Sum_probs=261.9

Q ss_pred             eeeeeeeeeccCCcc-eEEEecCcceEEEEEc----Cccc------eeeeecc-----------ccccceeeeEeecCcc
Q psy10942          3 FCVTCFDVIPQITSE-FSVHCGRDKVLFTWDL----SSRK------QLRSYPA-----------YESLETCAVFHLSDET   60 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~-~l~s~~~~g~v~iwd~----~~~~------~~~~~~~-----------~~~~~~~~~~~~~~~~   60 (537)
                      ..|+|++|+  |+++ +|++++.||.|++||+    .+++      ....+..           ...+..+  .+.|   
T Consensus        46 ~~v~~~~~s--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~---  118 (425)
T 1r5m_A           46 DNIVSSTWN--PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL--AWSH---  118 (425)
T ss_dssp             SCCSEEEEC--SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE--EECT---
T ss_pred             CceEEEEEC--CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE--EEcC---
Confidence            468999999  8888 9999999999999999    8888      4444443           3356666  5677   


Q ss_pred             ccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         61 ESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                           ++.+|++++.+|.|++|| .+++.+..+..+ ..|.+++|+|++++|++++.|+.|++||+.+           .
T Consensus       119 -----~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----------~  181 (425)
T 1r5m_A          119 -----DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS-----------G  181 (425)
T ss_dssp             -----TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT-----------T
T ss_pred             -----CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC-----------C
Confidence                 668999999999999999 667777777754 6999999999999999999999999999998           6


Q ss_pred             ceeEEeecchhh---------------hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHh
Q psy10942        140 KFRKQFVGFSDE---------------ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEA  204 (537)
Q Consensus       140 ~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~  204 (537)
                      +....+..+...               +.+++|+| + ..+++++.++.    |                 ++||+    
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~----i-----------------~~~d~----  234 (425)
T 1r5m_A          182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGA----I-----------------FVYQI----  234 (425)
T ss_dssp             EEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGC----E-----------------EEEET----
T ss_pred             cEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCe----E-----------------EEEEc----
Confidence            777888877776               99999984 4 45777777766    9                 99999    


Q ss_pred             hhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC
Q psy10942        205 KFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG  282 (537)
Q Consensus       205 ~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~  282 (537)
                         .+.+..  +.     +|  ...|.++   +|+|++++|++++.|+.++  +|++....                   
T Consensus       235 ---~~~~~~~~~~-----~~--~~~i~~~---~~~~~~~~l~~~~~d~~i~--i~d~~~~~-------------------  280 (425)
T 1r5m_A          235 ---TEKTPTGKLI-----GH--HGPISVL---EFNDTNKLLLSASDDGTLR--IWHGGNGN-------------------  280 (425)
T ss_dssp             ---TCSSCSEEEC-----CC--SSCEEEE---EEETTTTEEEEEETTSCEE--EECSSSBS-------------------
T ss_pred             ---CCCceeeeec-----cC--CCceEEE---EECCCCCEEEEEcCCCEEE--EEECCCCc-------------------
Confidence               766655  66     89  9999999   9999999999999999999  88877621                   


Q ss_pred             CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942        283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH  362 (537)
Q Consensus       283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  362 (537)
                                              .     ...+..|...|.+++|+|++ ++++++.|+.|++||+. ..+.+..+..|
T Consensus       281 ------------------------~-----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~~~~~~  329 (425)
T 1r5m_A          281 ------------------------S-----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLK-QNTLLALSIVD  329 (425)
T ss_dssp             ------------------------C-----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETT-TTEEEEEEECT
T ss_pred             ------------------------c-----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECC-CCcEeEecccC
Confidence                                    1     12234577889999999999 99999999999999998 55555555544


Q ss_pred             CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      ..                                                 .+.+++|+|++++|++++.||.|++||+.
T Consensus       330 ~~-------------------------------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~~~~  360 (425)
T 1r5m_A          330 GV-------------------------------------------------PIFAGRISQDGQKYAVAFMDGQVNVYDLK  360 (425)
T ss_dssp             TC-------------------------------------------------CEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred             Cc-------------------------------------------------cEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence            33                                                 78899999999999999999999999999


Q ss_pred             Cce--------------------eeeEeecCCc--ceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        443 DYV--------------------CLKSLEGHDA--SVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       443 ~~~--------------------~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      +++                    ++..+.+|..  .|++++|+|++++|++++.||.|++|+++
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          361 KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             HHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             CCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            888                    8899999976  99999999999999999999999999985

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-40  Score=310.81  Aligned_cols=289  Identities=16%  Similarity=0.195  Sum_probs=231.9

Q ss_pred             ehhhhcCCC-c-ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccce--e-EEeecchhhhhhhhcccCCC
Q psy10942         88 KELYQHGLS-S-PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKF--R-KQFVGFSDEILDIALLGEED  162 (537)
Q Consensus        88 ~~~~~~~~~-~-~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~-~~~~~~~~~v~~~~~~~~~~  162 (537)
                      +++.++..| + .|.+++|+|+|++||+++.|++|+|||+.+           ...  . ....+|...|.+++|+ |++
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~-----------~~~~~~~~~~~~h~~~v~~~~~s-p~g   73 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEG-----------DSWICKSVLSEGHQRTVRKVAWS-PCG   73 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEET-----------TEEEEEEEECSSCSSCEEEEEEC-TTS
T ss_pred             EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCC-----------CcceeeeeeccccCCcEEEEEEC-CCC
Confidence            344555555 4 899999999999999999999999999987           332  1 2336899999999999 788


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      ++|++++.++.    +                 ++|+.       ....  +.  +.     +|  ...|.++   +|+|
T Consensus        74 ~~l~s~s~D~~----v-----------------~iw~~-------~~~~~~~~~~~~-----~h--~~~v~~v---~~sp  115 (345)
T 3fm0_A           74 NYLASASFDAT----T-----------------CIWKK-------NQDDFECVTTLE-----GH--ENEVKSV---AWAP  115 (345)
T ss_dssp             SEEEEEETTSC----E-----------------EEEEE-------CCC-EEEEEEEC-----CC--SSCEEEE---EECT
T ss_pred             CEEEEEECCCc----E-----------------EEEEc-------cCCCeEEEEEcc-----CC--CCCceEE---EEeC
Confidence            89998888877    9                 99988       5543  22  66     99  9999999   9999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++++|++++.|+.++  +|++.....                                ..        .     ...+..
T Consensus       116 ~~~~l~s~s~D~~v~--iwd~~~~~~--------------------------------~~--------~-----~~~~~~  148 (345)
T 3fm0_A          116 SGNLLATCSRDKSVW--VWEVDEEDE--------------------------------YE--------C-----VSVLNS  148 (345)
T ss_dssp             TSSEEEEEETTSCEE--EEEECTTSC--------------------------------EE--------E-----EEEECC
T ss_pred             CCCEEEEEECCCeEE--EEECCCCCC--------------------------------eE--------E-----EEEecC
Confidence            999999999999999  999876310                                00        0     122456


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce--eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK--LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  396 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  396 (537)
                      |...|.+++|+|++++|++++.|+.|++||.. ...  ....+.                                +|..
T Consensus       149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~~~~--------------------------------~h~~  195 (345)
T 3fm0_A          149 HTQDVKHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCATLE--------------------------------GHES  195 (345)
T ss_dssp             CCSCEEEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEEEEC--------------------------------CCSS
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEEEec--------------------------------CCCC
Confidence            88899999999999999999999999999987 332  122233                                3332


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---------------ceeeeEeec-CCcceEEE
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---------------YVCLKSLEG-HDASVLRC  460 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------------~~~~~~~~~-~~~~v~~~  460 (537)
                                       .|.+++|+|++++|++++.|+.|++||...               .+++..+.+ |...|.++
T Consensus       196 -----------------~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v  258 (345)
T 3fm0_A          196 -----------------TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDI  258 (345)
T ss_dssp             -----------------CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEE
T ss_pred             -----------------ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEE
Confidence                             788999999999999999999999999632               234445555 88899999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECCCCe---------eEEEecCCccceeccCCCCCCccccccceeeecCCC-EEEEEeC
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIKTST---------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD-CEYRGGW  530 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~-~l~s~~~  530 (537)
                      +|+|++..|++++.|+.|++|+...+.         ......+|...|           .++   +|+|++. +||+++.
T Consensus       259 ~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V-----------~~v---~~~p~~~~~laS~s~  324 (345)
T 3fm0_A          259 AWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV-----------NCV---AWNPKEPGLLASCSD  324 (345)
T ss_dssp             EECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE-----------EEE---EECSSSTTEEEEEET
T ss_pred             EEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE-----------eEe---EEeCCCceEEEEcCC
Confidence            999999999999999999999986542         122346888889           899   9999984 9999999


Q ss_pred             CCCEEeC
Q psy10942        531 SPQVVVY  537 (537)
Q Consensus       531 dg~i~vW  537 (537)
                      ||.|++|
T Consensus       325 Dg~v~~W  331 (345)
T 3fm0_A          325 DGEVAFW  331 (345)
T ss_dssp             TSCEEEE
T ss_pred             CCcEEEE
Confidence            9999999

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=9.9e-40  Score=302.96  Aligned_cols=286  Identities=17%  Similarity=0.202  Sum_probs=230.0

Q ss_pred             hhhcCCC-cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         90 LYQHGLS-SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      ..++.+| +.|.+++|+|++ ++|++++.|++|++|++.+..      ......+..+.+|...|.+++|+ +++.++++
T Consensus        10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~------~~~~~~~~~~~~h~~~v~~~~~s-~dg~~l~s   82 (319)
T 3frx_A           10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDD------QKFGVPVRSFKGHSHIVQDCTLT-ADGAYALS   82 (319)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEET------TEEEEEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred             EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCC------ccccccceEEeCCcccEEEEEEC-CCCCEEEE
Confidence            3445555 689999999965 799999999999999997621      11134567899999999999999 78889999


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++.++.    |                 ++||+       .+++..  +.     +|  ...|.++   +|+|++++|++
T Consensus        83 ~s~D~~----v-----------------~~wd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~s  124 (319)
T 3frx_A           83 ASWDKT----L-----------------RLWDV-------ATGETYQRFV-----GH--KSDVMSV---DIDKKASMIIS  124 (319)
T ss_dssp             EETTSE----E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECTTSCEEEE
T ss_pred             EeCCCE----E-----------------EEEEC-------CCCCeeEEEc-----cC--CCcEEEE---EEcCCCCEEEE
Confidence            888877    9                 99999       877766  77     99  9999999   99999999999


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      ++.|+.++  +|++...                                            .     ...+.+|...|.+
T Consensus       125 ~s~D~~i~--vwd~~~~--------------------------------------------~-----~~~~~~h~~~v~~  153 (319)
T 3frx_A          125 GSRDKTIK--VWTIKGQ--------------------------------------------C-----LATLLGHNDWVSQ  153 (319)
T ss_dssp             EETTSCEE--EEETTSC--------------------------------------------E-----EEEECCCSSCEEE
T ss_pred             EeCCCeEE--EEECCCC--------------------------------------------e-----EEEEeccCCcEEE
Confidence            99999998  8887541                                            0     1123467888999


Q ss_pred             EEEcCCC------CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        326 VTVSPND------KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       326 ~~~s~~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      ++|+|.+      ..+++++.|+.|++||++ ..+                                ....+.+|..   
T Consensus       154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~--------------------------------~~~~~~~h~~---  197 (319)
T 3frx_A          154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN-QFQ--------------------------------IEADFIGHNS---  197 (319)
T ss_dssp             EEECCC------CCEEEEEETTSCEEEEETT-TTE--------------------------------EEEEECCCCS---
T ss_pred             EEEccCCCCCCCccEEEEEeCCCEEEEEECC-cch--------------------------------hheeecCCCC---
Confidence            9999854      356666666666666665 333                                3333444443   


Q ss_pred             EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                                    .|.+++|+|++++|++++.||.|++||+.+++.+..+..+ ..|.+++|+|++.+|++++.+ .++
T Consensus       198 --------------~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~  261 (319)
T 3frx_A          198 --------------NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIK  261 (319)
T ss_dssp             --------------CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEE
T ss_pred             --------------cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcE
Confidence                          7888999999999999999999999999999999998854 679999999999999988765 499


Q ss_pred             EEECCCCeeEEEecCC--------ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        480 LWSIKTSTCVSTFDKH--------ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       480 vwd~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +|++..+..+..+..+        ...+           .++   +|+|||++|++++.||.|+||
T Consensus       262 v~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~spdg~~l~sg~~Dg~i~vW  313 (319)
T 3frx_A          262 VFSLDPQYLVDDLRPEFAGYSKAAEPHA-----------VSL---AWSADGQTLFAGYTDNVIRVW  313 (319)
T ss_dssp             EEEETTEEEEEEECCCCTTCCGGGCCCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred             EEEeCcCeeeeccCccccccccCcCcce-----------eEE---EECCCCCEEEEeecCceEEEE
Confidence            9999888877776543        3344           677   999999999999999999999

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=8.5e-40  Score=303.19  Aligned_cols=284  Identities=22%  Similarity=0.309  Sum_probs=240.5

Q ss_pred             hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         91 YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        91 ~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ..+..| +.|.+++|+|++++||+++.|+.|++|+..+           .+....+.+|...|.+++|+ +++++|++++
T Consensus        17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~   84 (312)
T 4ery_A           17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----------GKFEKTISGHKLGISDVAWS-SDSNLLVSAS   84 (312)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------CCEEEEECCCSSCEEEEEEC-TTSSEEEEEE
T ss_pred             EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-----------cccchhhccCCCceEEEEEc-CCCCEEEEEC
Confidence            334444 6899999999999999999999999999988           67788899999999999999 7888888888


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                      .++.    |                 ++||+       +++++.  +.     +|  ...|.++   +|+|++++|++++
T Consensus        85 ~d~~----i-----------------~vwd~-------~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~s~~  126 (312)
T 4ery_A           85 DDKT----L-----------------KIWDV-------SSGKCLKTLK-----GH--SNYVFCC---NFNPQSNLIVSGS  126 (312)
T ss_dssp             TTSE----E-----------------EEEET-------TTCCEEEEEE-----CC--SSCEEEE---EECSSSSEEEEEE
T ss_pred             CCCE----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCCEEEE---EEcCCCCEEEEEe
Confidence            8777    9                 99999       777766  67     89  9999999   9999999999999


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      .|+.++  +|++..+                                           +.     ...+..|..+|.+++
T Consensus       127 ~d~~i~--iwd~~~~-------------------------------------------~~-----~~~~~~~~~~v~~~~  156 (312)
T 4ery_A          127 FDESVR--IWDVKTG-------------------------------------------KC-----LKTLPAHSDPVSAVH  156 (312)
T ss_dssp             TTSCEE--EEETTTC-------------------------------------------CE-----EEEECCCSSCEEEEE
T ss_pred             CCCcEE--EEECCCC-------------------------------------------EE-----EEEecCCCCcEEEEE
Confidence            888888  8887652                                           11     112346778899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      |+|++++|++++.|+.|++||+. ..+.+..+..+                               +..           
T Consensus       157 ~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~-------------------------------~~~-----------  193 (312)
T 4ery_A          157 FNRDGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDD-------------------------------DNP-----------  193 (312)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETT-TCCEEEEECCS-------------------------------SCC-----------
T ss_pred             EcCCCCEEEEEeCCCcEEEEECC-CCceeeEEecc-------------------------------CCC-----------
Confidence            99999999999999999999998 43333322111                               111           


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE--EEEe-cCCCEEEEEeCCCcEEEEECC
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR--CHFI-NKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~s-~~~~~l~s~~~dg~v~vwd~~  484 (537)
                            .+..++|+|++++|++++.|+.|++||+.+++.+..+.+|...+..  ..++ +++.+|++++.||.|++||+.
T Consensus       194 ------~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~  267 (312)
T 4ery_A          194 ------PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ  267 (312)
T ss_dssp             ------CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred             ------ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence                  6788999999999999999999999999999999999988765432  3344 678899999999999999999


Q ss_pred             CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe--CCCCEEeC
Q psy10942        485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG--WSPQVVVY  537 (537)
Q Consensus       485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~--~dg~i~vW  537 (537)
                      +++.+..+.+|...|           .++   +|+|++++|++++  .|+.|++|
T Consensus       268 ~~~~~~~~~~h~~~v-----------~~~---~~~p~~~~l~s~~~~~d~~i~~W  308 (312)
T 4ery_A          268 TKEIVQKLQGHTDVV-----------IST---ACHPTENIIASAALENDKTIKLW  308 (312)
T ss_dssp             TCCEEEEECCCSSCE-----------EEE---EECSSSSEEEEEECTTTCCEEEE
T ss_pred             CchhhhhhhccCCcE-----------EEE---eecCcCCceEEEEccCCccEEEe
Confidence            999999999999999           999   9999999999987  69999999

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=8.1e-40  Score=316.94  Aligned_cols=347  Identities=12%  Similarity=0.120  Sum_probs=269.4

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET   84 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~   84 (537)
                      +++++|+  |++++|++++.||.|++||+.+++....+... .+..+. .+.|        ++.++++++.|+.|++||+
T Consensus        59 ~~~~~~s--~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~-~~~~--------~~~~l~~~~~dg~i~iwd~  126 (420)
T 3vl1_A           59 GKGNTFE--KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVD-TAKL--------QMRRFILGTTEGDIKVLDS  126 (420)
T ss_dssp             CTTCEEE--EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEE-EECS--------SSCEEEEEETTSCEEEECT
T ss_pred             ccceeee--ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEE-EEec--------CCCEEEEEECCCCEEEEeC
Confidence            5689999  89999999999999999999998877766544 222221 2344        6789999999999999999


Q ss_pred             cceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942         85 SAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS  163 (537)
Q Consensus        85 ~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  163 (537)
                      .+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.+           .+.+..+.+|...|.+++|+ ++++
T Consensus       127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~  194 (420)
T 3vl1_A          127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-----------GSNPRTLIGHRATVTDIAII-DRGR  194 (420)
T ss_dssp             TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCCCEEEECCSSCEEEEEEE-TTTT
T ss_pred             CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------CcCceEEcCCCCcEEEEEEc-CCCC
Confidence            999988887544 7999999999999999999999999999998           67788899999999999999 7788


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      .|++++.++.    |                 ++||+       .+++..........|  ...+.++   ++.|++...
T Consensus       195 ~l~s~~~d~~----v-----------------~iwd~-------~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~~  241 (420)
T 3vl1_A          195 NVLSASLDGT----I-----------------RLWEC-------GTGTTIHTFNRKENP--HDGVNSI---ALFVGTDRQ  241 (420)
T ss_dssp             EEEEEETTSC----E-----------------EEEET-------TTTEEEEEECBTTBT--TCCEEEE---EEEECCCSS
T ss_pred             EEEEEcCCCc----E-----------------EEeEC-------CCCceeEEeecCCCC--CCCccEE---EEecCCcce
Confidence            8888887777    9                 99999       777665221122246  7888998   887776544


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                      +.......+.                      .+..+...  ..+++++.||.|++||+.+++.....    ...|...|
T Consensus       242 ~~~~~~~~v~----------------------~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v  293 (420)
T 3vl1_A          242 LHEISTSKKN----------------------NLEFGTYG--KYVIAGHVSGVITVHNVFSKEQTIQL----PSKFTCSC  293 (420)
T ss_dssp             CGGGCCCCCC----------------------TTCSSCTT--EEEEEEETTSCEEEEETTTCCEEEEE----CCTTSSCE
T ss_pred             eeecccCccc----------------------ceEEcCCC--CEEEEEcCCCeEEEEECCCCceeEEc----ccccCCCc
Confidence            3222222221                      11111111  57899999999999999988764332    34688899


Q ss_pred             EEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        324 NCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       324 ~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      .+++|+|+++ +|++++.||.|++||++....++..+..+..                               .      
T Consensus       294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------------~------  336 (420)
T 3vl1_A          294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG-------------------------------T------  336 (420)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT-------------------------------S------
T ss_pred             eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC-------------------------------C------
Confidence            9999999999 9999999999999999854454555554322                               1      


Q ss_pred             EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---------eeeeEeecCCcceEEEEEecCCC---EEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---------VCLKSLEGHDASVLRCHFINKGT---QIV  470 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~s~~~~---~l~  470 (537)
                                 .+.++.+ +++++|++++.|+.|++|++...         .....+..|.+.|.+++|+|+++   .|+
T Consensus       337 -----------~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~  404 (420)
T 3vl1_A          337 -----------PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL  404 (420)
T ss_dssp             -----------CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE
T ss_pred             -----------CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE
Confidence                       5566644 57789999999999999998763         22334567888999999999999   788


Q ss_pred             EEeCCCcEEEEECCC
Q psy10942        471 STGADGLLKLWSIKT  485 (537)
Q Consensus       471 s~~~dg~v~vwd~~~  485 (537)
                      +++.+|.+.+|++++
T Consensus       405 a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          405 EVGKNNFCALYNLSN  419 (420)
T ss_dssp             EEETTTEEEEEESCC
T ss_pred             EEcCCceEEEEeccC
Confidence            888899999999864

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.3e-40  Score=308.08  Aligned_cols=301  Identities=16%  Similarity=0.117  Sum_probs=220.3

Q ss_pred             EEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942         79 LHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL  158 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  158 (537)
                      .+.|++......   .....|.+++|+|||++|++++ |+++++||.....-.................|...|.+++|+
T Consensus        16 ~r~w~~~~~~~~---~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s   91 (344)
T 4gqb_B           16 AREWNLPPNAPA---CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV   91 (344)
T ss_dssp             -------CCSCS---SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE
T ss_pred             ccccCCCCCCcc---cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe
Confidence            466776554322   2335799999999999998877 667888874320000000000012222333456679999999


Q ss_pred             cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc
Q psy10942        159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV  237 (537)
Q Consensus       159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s  237 (537)
                      | + +.+++++.++.    |                 ++||+       .+++.. .......+|  ...|.++   +|+
T Consensus        92 ~-d-~~l~~~s~dg~----v-----------------~lWd~-------~~~~~~~~~~~~~~~H--~~~V~~v---~~s  136 (344)
T 4gqb_B           92 G-E-RGILVASDSGA----V-----------------ELWEL-------DENETLIVSKFCKYEH--DDIVSTV---SVL  136 (344)
T ss_dssp             T-T-TEEEEEETTSE----E-----------------EEEEE-------CTTSSCEEEEEEEECC--SSCEEEE---EEC
T ss_pred             C-C-CeEEEEECCCE----E-----------------EEEec-------cCCCceeEeeccccCC--CCCEEEE---EEC
Confidence            4 4 56778877776    9                 99999       777655 222233489  9999999   999


Q ss_pred             cCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccc
Q psy10942        238 KEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK  317 (537)
Q Consensus       238 ~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~  317 (537)
                      |+|++|++|+.|+.|+  +|++.++                                           +.     ...+.
T Consensus       137 pdg~~l~sgs~d~~i~--iwd~~~~-------------------------------------------~~-----~~~~~  166 (344)
T 4gqb_B          137 SSGTQAVSGSKDICIK--VWDLAQQ-------------------------------------------VV-----LSSYR  166 (344)
T ss_dssp             TTSSEEEEEETTSCEE--EEETTTT-------------------------------------------EE-----EEEEC
T ss_pred             CCCCEEEEEeCCCeEE--EEECCCC-------------------------------------------cE-----EEEEc
Confidence            9999999999988888  8877652                                           11     22346


Q ss_pred             ccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcee------------eEEEEecC-CCCEEEEEcCCCcEEEEECC
Q psy10942        318 GHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKL------------LNVLRGHK-KGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~------------~~~~~~~~-~~~~l~~~~~d~~i~i~d~~  383 (537)
                      +|...|.+++|+|++ .+|++++.|+.|++||++. .+.            +..+..++ ++.++++++.|++|++||++
T Consensus       167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~  245 (344)
T 4gqb_B          167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK  245 (344)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred             CcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence            789999999999988 4789999999999999983 332            23344454 46788999999999999999


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~  462 (537)
                      +++++..+..|..                 .|.+++|+|++ ++|++|+.|++|++||+.+++++ .+.+|.+.|++++|
T Consensus       246 ~~~~~~~~~~h~~-----------------~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~  307 (344)
T 4gqb_B          246 STSCVLSSAVHSQ-----------------CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATW  307 (344)
T ss_dssp             C--CCEEEECCSS-----------------CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEE
T ss_pred             CCcEEEEEcCCCC-----------------CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEE
Confidence            9999999998887                 67788888887 57999999999999999988754 57889999999999


Q ss_pred             ecCCC-EEEEEeCCCcEEEEECCCCe
Q psy10942        463 INKGT-QIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       463 s~~~~-~l~s~~~dg~v~vwd~~~~~  487 (537)
                      +|+++ +|++++.|++|++|++.+..
T Consensus       308 sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          308 SPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             CSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             eCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            99876 67799999999999997654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-39  Score=304.49  Aligned_cols=296  Identities=20%  Similarity=0.205  Sum_probs=220.4

Q ss_pred             hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ec-chhhhhhhhcccCCCccE
Q psy10942         89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VG-FSDEILDIALLGEEDSHI  165 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l  165 (537)
                      ++..+..| +.|.+++|+|+  +||+++.|+.|++||+..+.         ......+ .+ |...|.+++|+ |++++|
T Consensus         6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~---------~~~~~~~~~~~h~~~v~~v~~s-p~~~~l   73 (330)
T 2hes_X            6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD---------FTLIDVLDETAHKKAIRSVAWR-PHTSLL   73 (330)
T ss_dssp             EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC---------CEEEEEECTTCCCSCEEEEEEC-TTSSEE
T ss_pred             cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC---------eEEEEEEecCCccCCEEEEEEC-CCCCEE
Confidence            34445544 68999999998  99999999999999998621         2344555 44 99999999999 678888


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      ++++.++.    |                 ++||...........+..  +.     +|  ...|.++   +|+|++++|
T Consensus        74 as~s~D~~----v-----------------~iw~~~~~~~~~~~~~~~~~~~-----~h--~~~V~~v---~~sp~g~~l  122 (330)
T 2hes_X           74 AAGSFDST----V-----------------SIWAKEESADRTFEMDLLAIIE-----GH--ENEVKGV---AWSNDGYYL  122 (330)
T ss_dssp             EEEETTSC----E-----------------EEEEC-------CCCEEEEEEC-----------CEEEE---EECTTSCEE
T ss_pred             EEEeCCCc----E-----------------EEEEcccCcCccccceeEEEEc-----CC--CCcEEEE---EECCCCCEE
Confidence            88887777    9                 999871100000011222  55     99  9999999   999999999


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                      ++++.|+.++  +|++......                                       .+.     ...+.+|...|
T Consensus       123 as~s~D~~v~--iwd~~~~~~~---------------------------------------~~~-----~~~~~~h~~~v  156 (330)
T 2hes_X          123 ATCSRDKSVW--IWETDESGEE---------------------------------------YEC-----ISVLQEHSQDV  156 (330)
T ss_dssp             EEEETTSCEE--EEECCTTCCC---------------------------------------CEE-----EEEECCCSSCE
T ss_pred             EEEeCCCEEE--EEeccCCCCC---------------------------------------eEE-----EEEeccCCCce
Confidence            9999999999  9998542100                                       000     22345788999


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGL-KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA  402 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  402 (537)
                      .+++|+|++++|++++.|+.|++||..... +++..+..                                |..      
T Consensus       157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~--------------------------------h~~------  198 (330)
T 2hes_X          157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG--------------------------------HEG------  198 (330)
T ss_dssp             EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC--------------------------------CSS------
T ss_pred             EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC--------------------------------CCC------
Confidence            999999999999999999999999987321 23333333                                333      


Q ss_pred             EecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCc--------eeeeEeec-CCcceEEEEEecCCCEEEE
Q psy10942        403 ITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDY--------VCLKSLEG-HDASVLRCHFINKGTQIVS  471 (537)
Q Consensus       403 ~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~-~~~~v~~~~~s~~~~~l~s  471 (537)
                                 .|.+++|+|+  +.+|++++.|++|++||+..+        .....+.. |...|.+++|++++ +|++
T Consensus       199 -----------~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s  266 (330)
T 2hes_X          199 -----------TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIAS  266 (330)
T ss_dssp             -----------CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEE
T ss_pred             -----------cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEE
Confidence                       7788888888  678999999999999998764        34555555 89999999999765 8999


Q ss_pred             EeCCCcEEEEECCCCe--eEEE-ecCCcc-ceeccCCCCCCccccccceeeec--CCCEEEEEeCCCCEEeC
Q psy10942        472 TGADGLLKLWSIKTST--CVST-FDKHAL-KIRNSDSENDHKGFGLPRQLCSR--NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~~--~~~~-~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~--~~~~l~s~~~dg~i~vW  537 (537)
                      ++.||.|++||..+++  .... +.+|.. .|           .++   +|+|  ++++|++++.||.|+||
T Consensus       267 ~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v-----------~~v---~~~~~~~~~~las~s~Dg~v~~W  324 (330)
T 2hes_X          267 VGADGVLAVYEEVDGEWKVFAKRALCHGVYEI-----------NVV---KWLELNGKTILATGGDDGIVNFW  324 (330)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEESCTTTTSCE-----------EEE---EEC-----CCEEEEETTSEEEEE
T ss_pred             EeCCCEEEEEEcCCCceEEEeccccccccceE-----------EEE---EEecCCCceEEEEecCCCcEEEE
Confidence            9999999999998774  3333 356776 77           888   9999  78999999999999998

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.8e-39  Score=297.00  Aligned_cols=282  Identities=18%  Similarity=0.209  Sum_probs=235.2

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +.+.+.++  .++|        +++++++++.||.|++||+++++.+..+..+ ..|.+++|+|++++|++++.|+.|++
T Consensus        12 h~~~V~~~--~fsp--------~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v   81 (304)
T 2ynn_A           12 RSDRVKGI--DFHP--------TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV   81 (304)
T ss_dssp             ECSCEEEE--EECS--------SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred             CCCceEEE--EECC--------CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence            55677778  5688        6789999999999999999999988888765 58999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||+.+           ++.+..+.+|.+.|.+++|+ |++.++++++.++.    |                 ++||+  
T Consensus        82 wd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~sgs~D~~----v-----------------~lWd~--  126 (304)
T 2ynn_A           82 FNYNT-----------GEKVVDFEAHPDYIRSIAVH-PTKPYVLSGSDDLT----V-----------------KLWNW--  126 (304)
T ss_dssp             EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEEG--
T ss_pred             EECCC-----------CcEEEEEeCCCCcEEEEEEc-CCCCEEEEECCCCe----E-----------------EEEEC--
Confidence            99999           68888999999999999999 77888888888777    9                 99999  


Q ss_pred             Hhhhccccccc---ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceee
Q psy10942        203 EAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGA  278 (537)
Q Consensus       203 ~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~  278 (537)
                           ++....   +.     +|  ...|.++   +|+| ++.+|++|+.|+.|+  +|++.....              
T Consensus       127 -----~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~~~l~sgs~D~~v~--iwd~~~~~~--------------  175 (304)
T 2ynn_A          127 -----ENNWALEQTFE-----GH--EHFVMCV---AFNPKDPSTFASGCLDRTVK--VWSLGQSTP--------------  175 (304)
T ss_dssp             -----GGTTEEEEEEC-----CC--CSCEEEE---EECTTCTTEEEEEETTSEEE--EEETTCSSC--------------
T ss_pred             -----CCCcchhhhhc-----cc--CCcEEEE---EECCCCCCEEEEEeCCCeEE--EEECCCCCc--------------
Confidence                 655332   66     99  9999999   9999 578899999998888  888765210              


Q ss_pred             eeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCceee
Q psy10942        279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKLL  356 (537)
Q Consensus       279 ~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~  356 (537)
                                                   .    ......|...+..+.|+|  ++++|++++.|+.|++||++ ..+.+
T Consensus       176 -----------------------------~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~-~~~~~  221 (304)
T 2ynn_A          176 -----------------------------N----FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ-TKSCV  221 (304)
T ss_dssp             -----------------------------S----EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT-TTEEE
T ss_pred             -----------------------------c----ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC-CCccc
Confidence                                         0    001124556788888876  67789999999999999988 55666


Q ss_pred             EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                      ..+..|..                                                 .+.+++|+|++++|++|+.||.|
T Consensus       222 ~~~~~h~~-------------------------------------------------~v~~~~~~p~~~~l~s~s~Dg~i  252 (304)
T 2ynn_A          222 ATLEGHMS-------------------------------------------------NVSFAVFHPTLPIIISGSEDGTL  252 (304)
T ss_dssp             EEEECCSS-------------------------------------------------CEEEEEECSSSSEEEEEETTSCE
T ss_pred             eeeCCCCC-------------------------------------------------CEEEEEECCCCCEEEEEcCCCeE
Confidence            66665544                                                 78889999999999999999999


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCC--EEEEEeCCCcEEEEECCC
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGT--QIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~v~vwd~~~  485 (537)
                      ++||+.+++.+..+..|...+.+++|+|++.  ++++++.|| +.+|++.+
T Consensus       253 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          253 KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             EEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred             EEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence            9999999999999999999999999999875  577777665 77888754

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-41  Score=323.90  Aligned_cols=337  Identities=14%  Similarity=0.137  Sum_probs=260.1

Q ss_pred             eeeeeeeeccCCcc-eEEEe----------cCcceEEEEEcCccc---eeeeeccccccceeeeEeecCccccccCCcEE
Q psy10942          4 CVTCFDVIPQITSE-FSVHC----------GRDKVLFTWDLSSRK---QLRSYPAYESLETCAVFHLSDETESKSGGKTF   69 (537)
Q Consensus         4 ~V~~~~~~~~~~~~-~l~s~----------~~~g~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (537)
                      .|++++|+  |+++ +|+++          +.|+.|++||+.+++   .+..+.+...+..+  .+.|        ++.+
T Consensus        14 ~v~~~~~s--p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~--~~s~--------~~~~   81 (416)
T 2pm9_A           14 RTATFAWS--HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDL--DWSH--------NNKI   81 (416)
T ss_dssp             ESCBCCBC--SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEE--EECS--------SSSC
T ss_pred             hcceEeeC--CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEE--EECC--------CCCe
Confidence            68999999  7876 99999          889999999999886   45556667777777  5677        6689


Q ss_pred             EEEeCccceEEeeeccc----eehhhhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeE
Q psy10942         70 VLAGGEKSLLHYYETSA----VKELYQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        70 ~~~~~~~~~i~~wd~~~----~~~~~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      |++++.||.|++||+.+    .+.+..+..| +.|.+++|+|+ +++|++++.|+.|++||+.+....... . ......
T Consensus        82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~-~~~~~~  159 (416)
T 2pm9_A           82 IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN-Y-TPLTPG  159 (416)
T ss_dssp             EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT-C-CCBCCC
T ss_pred             EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc-c-cccccc
Confidence            99999999999999987    3466666644 69999999998 899999999999999999884210000 0 011223


Q ss_pred             EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cc-ccccc
Q psy10942        144 QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KH-NTERL  220 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~-~~~~~  220 (537)
                      .+.+|...|.+++|+|.++..+++++.++.    |                 ++||+       .+.+..  +. .....
T Consensus       160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----v-----------------~iwd~-------~~~~~~~~~~~~~~~~  211 (416)
T 2pm9_A          160 QSMSSVDEVISLAWNQSLAHVFASAGSSNF----A-----------------SIWDL-------KAKKEVIHLSYTSPNS  211 (416)
T ss_dssp             CSCCSSCCCCEEEECSSCTTEEEEESSSSC----E-----------------EEEET-------TTTEEEEEECCCCCSS
T ss_pred             cccCCCCCeeEEEeCCCCCcEEEEEcCCCC----E-----------------EEEEC-------CCCCcceEEecccccc
Confidence            346788899999999544677777777766    9                 99999       766655  32 01112


Q ss_pred             cCCCcCeEEEEeccCcccCC-CeeeeccCCC---cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEP---STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~---~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                      +|  ...|.++   +|+|++ .++++++.|+   .|+  +|++....                                 
T Consensus       212 ~~--~~~v~~~---~~~~~~~~~l~~~~~d~~~~~i~--~~d~~~~~---------------------------------  251 (416)
T 2pm9_A          212 GI--KQQLSVV---EWHPKNSTRVATATGSDNDPSIL--IWDLRNAN---------------------------------  251 (416)
T ss_dssp             CC--CCCEEEE---EECSSCTTEEEEEECCSSSCCCC--EEETTSTT---------------------------------
T ss_pred             cc--CCceEEE---EECCCCCCEEEEEECCCCCceEE--EEeCCCCC---------------------------------
Confidence            45  6789999   999997 5788888887   788  77776521                                 


Q ss_pred             EEEEECCCCceeeeeeccccc-ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                               ..     ...+. +|...|.+++|+| ++++|++++.|+.|++||+. ..+.+..+..|..          
T Consensus       252 ---------~~-----~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~-~~~~~~~~~~~~~----------  306 (416)
T 2pm9_A          252 ---------TP-----LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE-SAEQLSQFPARGN----------  306 (416)
T ss_dssp             ---------SC-----SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS-SCCEEEEEECSSS----------
T ss_pred             ---------CC-----cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC-CCccceeecCCCC----------
Confidence                     00     22334 6888999999999 99999999999999999998 5555555555443          


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeec-
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEG-  452 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-  452 (537)
                                                             .+.+++|+|++ ++|++++.|+.|++||+.+.+....... 
T Consensus       307 ---------------------------------------~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~  347 (416)
T 2pm9_A          307 ---------------------------------------WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQET  347 (416)
T ss_dssp             ---------------------------------------CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---
T ss_pred             ---------------------------------------ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccc
Confidence                                                   78889999998 8999999999999999987654332211 


Q ss_pred             ----------------------------------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        453 ----------------------------------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       453 ----------------------------------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                                                        |..++.+++|+|+|++|++++.|+.|+||++.+.
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          348 ETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             -------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             cccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence                                              5677889999999999999999999999998764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.7e-39  Score=310.73  Aligned_cols=288  Identities=18%  Similarity=0.251  Sum_probs=231.4

Q ss_pred             hhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh------------------hh
Q psy10942         91 YQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD------------------EI  152 (537)
Q Consensus        91 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v  152 (537)
                      ..+.+.+.|.+++|+|||++||+++ ++.+++|++.+           ++.+..+..|..                  .|
T Consensus        59 ~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~-----------g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v  126 (393)
T 1erj_A           59 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-----------GSLVARLSDDSAANKDPENLNTSSSPSSDLYI  126 (393)
T ss_dssp             EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-----------CCEEEEECC-----------------CCCCBE
T ss_pred             EecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecC-----------CCEEEEecCccccccccccccccccCCCceeE
Confidence            3345667999999999999999976 68899999988           555666655432                  38


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEE
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTL  230 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~  230 (537)
                      .+++|+ +++++|++++.++.    |                 ++||+       .+++..  +.     +|  ...|.+
T Consensus       127 ~~v~~s-~dg~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~h--~~~v~~  170 (393)
T 1erj_A          127 RSVCFS-PDGKFLATGAEDRL----I-----------------RIWDI-------ENRKIVMILQ-----GH--EQDIYS  170 (393)
T ss_dssp             EEEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEE
T ss_pred             EEEEEC-CCCCEEEEEcCCCe----E-----------------EEEEC-------CCCcEEEEEc-----cC--CCCEEE
Confidence            899999 78888988887777    9                 99999       777665  77     99  999999


Q ss_pred             EeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        231 LERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                      +   +|+|++++|++++.|+.++  +|++..+.                                           ....
T Consensus       171 ~---~~~p~~~~l~s~s~d~~v~--iwd~~~~~-------------------------------------------~~~~  202 (393)
T 1erj_A          171 L---DYFPSGDKLVSGSGDRTVR--IWDLRTGQ-------------------------------------------CSLT  202 (393)
T ss_dssp             E---EECTTSSEEEEEETTSEEE--EEETTTTE-------------------------------------------EEEE
T ss_pred             E---EEcCCCCEEEEecCCCcEE--EEECCCCe-------------------------------------------eEEE
Confidence            9   9999999999999998888  88877621                                           1000


Q ss_pred             eecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        311 VLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                            ..+...+.+++|+| ++++|++++.|+.|++||+. ....+..+....                         .
T Consensus       203 ------~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~-~~~~~~~~~~~~-------------------------~  250 (393)
T 1erj_A          203 ------LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-TGFLVERLDSEN-------------------------E  250 (393)
T ss_dssp             ------EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT-TCCEEEEEC-----------------------------
T ss_pred             ------EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEeecccc-------------------------c
Confidence                  01345689999999 89999999999999999998 444444332110                         0


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc------------eeeeEeecCCcce
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY------------VCLKSLEGHDASV  457 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~v  457 (537)
                      ...+|..                 .|.+++|+|++++|++|+.|+.|++||+.+.            .+...+.+|...|
T Consensus       251 ~~~~h~~-----------------~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  313 (393)
T 1erj_A          251 SGTGHKD-----------------SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV  313 (393)
T ss_dssp             --CCCSS-----------------CEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCE
T ss_pred             CCCCCCC-----------------CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcE
Confidence            0112332                 7889999999999999999999999998753            3456788999999


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeec------CCCEEEEEeCC
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR------NSDCEYRGGWS  531 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~------~~~~l~s~~~d  531 (537)
                      .+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|           .++   +|++      ++++|++++.|
T Consensus       314 ~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v-----------~~v---~~~~~~~~~p~~~~l~sgs~D  379 (393)
T 1erj_A          314 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV-----------ISV---AVANGSSLGPEYNVFATGSGD  379 (393)
T ss_dssp             EEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECSSCTTCTTCEEEEEEETT
T ss_pred             EEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCE-----------EEE---EecCCcCcCCCCCEEEEECCC
Confidence            999999999999999999999999999999999999999999           888   8765      78999999999


Q ss_pred             CCEEeC
Q psy10942        532 PQVVVY  537 (537)
Q Consensus       532 g~i~vW  537 (537)
                      |.|+||
T Consensus       380 g~i~iW  385 (393)
T 1erj_A          380 CKARIW  385 (393)
T ss_dssp             SEEEEE
T ss_pred             CcEEEC
Confidence            999999

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3e-39  Score=304.06  Aligned_cols=292  Identities=17%  Similarity=0.212  Sum_probs=238.0

Q ss_pred             eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeC
Q psy10942         39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTA  116 (537)
Q Consensus        39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~  116 (537)
                      .+.+. +..++.++  .+.|        ++.+|++++.|+.|++||..+++....+..+ ..|.+++|+|+|++||+++.
T Consensus        57 ~~~l~gH~~~V~~~--~~s~--------d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~  126 (354)
T 2pbi_B           57 RRTLKGHGNKVLCM--DWCK--------DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL  126 (354)
T ss_dssp             EEEEECCSSCEEEE--EECT--------TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST
T ss_pred             EEEecCCCCeEEEE--EECC--------CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence            34444 56677777  5577        6689999999999999999988877776655 58999999999999999999


Q ss_pred             CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHH
Q psy10942        117 DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK  196 (537)
Q Consensus       117 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  196 (537)
                      |+.+++|++.....     .........+.+|...|.+++|+ +++..|++++.++.    |                 +
T Consensus       127 d~~i~v~~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~t~s~D~~----v-----------------~  179 (354)
T 2pbi_B          127 DNKCSVYPLTFDKN-----ENMAAKKKSVAMHTNYLSACSFT-NSDMQILTASGDGT----C-----------------A  179 (354)
T ss_dssp             TSEEEEEECCCCTT-----CCSGGGCEEEEECSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------E
T ss_pred             CCCEEEEEEecccc-----ccccccceeeeccCCcEEEEEEe-CCCCEEEEEeCCCc----E-----------------E
Confidence            99999999875311     11124556788899999999999 77788888888877    9                 9


Q ss_pred             HHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc--CCCeeeeccCCCcceeccccccCCCccccccccc
Q psy10942        197 TFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK--EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP  272 (537)
Q Consensus       197 ~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~--~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~  272 (537)
                      +||+       ++++..  +.     +|  ...|.++   +++|  ++++|++++.|+.++  +||+..           
T Consensus       180 lwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~g~~l~sgs~Dg~v~--~wd~~~-----------  229 (354)
T 2pbi_B          180 LWDV-------ESGQLLQSFH-----GH--GADVLCL---DLAPSETGNTFVSGGCDKKAM--VWDMRS-----------  229 (354)
T ss_dssp             EEET-------TTCCEEEEEE-----CC--SSCEEEE---EECCCSSCCEEEEEETTSCEE--EEETTT-----------
T ss_pred             EEeC-------CCCeEEEEEc-----CC--CCCeEEE---EEEeCCCCCEEEEEeCCCeEE--EEECCC-----------
Confidence            9999       877766  77     99  9999999   8876  467788777777777  777655           


Q ss_pred             ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy10942        273 EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG  352 (537)
Q Consensus       273 ~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  352 (537)
                                                      ++.     ...+..|...|.+++|+|++++|++++.|+.|++||++ .
T Consensus       230 --------------------------------~~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~-~  271 (354)
T 2pbi_B          230 --------------------------------GQC-----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR-A  271 (354)
T ss_dssp             --------------------------------CCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-T
T ss_pred             --------------------------------CcE-----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC-C
Confidence                                            222     22235688899999999999999999999999999998 4


Q ss_pred             ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      ...+..+..+.                              +..                 .+.+++|+|++++|++|+.
T Consensus       272 ~~~~~~~~~~~------------------------------~~~-----------------~~~~~~~s~~g~~l~~g~~  304 (354)
T 2pbi_B          272 DREVAIYSKES------------------------------IIF-----------------GASSVDFSLSGRLLFAGYN  304 (354)
T ss_dssp             TEEEEEECCTT------------------------------CCS-----------------CEEEEEECTTSSEEEEEET
T ss_pred             CcEEEEEcCCC------------------------------ccc-----------------ceeEEEEeCCCCEEEEEEC
Confidence            33332222111                              000                 6788999999999999999


Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      |+.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.|++|++|+
T Consensus       305 d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          305 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             CCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999999999999999999999999999999996

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=8.7e-39  Score=296.62  Aligned_cols=293  Identities=16%  Similarity=0.262  Sum_probs=231.0

Q ss_pred             eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-----ehhhhcCCC-cceEEEEEeccccEE
Q psy10942         39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV-----KELYQHGLS-SPLVRIVRSSVKRMY  111 (537)
Q Consensus        39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~-----~~~~~~~~~-~~v~~~~~s~~~~~l  111 (537)
                      ..++. |..++..+  .+.|.       +..++++++.|+.|++||+...     ..+..+..| ..|.+++|+|++++|
T Consensus        10 ~~~l~gH~~~V~~l--~~~~~-------~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l   80 (319)
T 3frx_A           10 RGTLEGHNGWVTSL--ATSAG-------QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA   80 (319)
T ss_dssp             EEEECCCSSCEEEE--EECSS-------CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             EEEEccccceEEEE--EccCC-------CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE
Confidence            33444 55667777  55774       4579999999999999998753     345566655 699999999999999


Q ss_pred             EEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcc
Q psy10942        112 AVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHN  191 (537)
Q Consensus       112 a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~  191 (537)
                      ++++.|++|++||+.+           ++....+.+|...|.+++|+ +++.++++++.++.    |             
T Consensus        81 ~s~s~D~~v~~wd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~D~~----i-------------  131 (319)
T 3frx_A           81 LSASWDKTLRLWDVAT-----------GETYQRFVGHKSDVMSVDID-KKASMIISGSRDKT----I-------------  131 (319)
T ss_dssp             EEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSCEEEEEETTSC----E-------------
T ss_pred             EEEeCCCEEEEEECCC-----------CCeeEEEccCCCcEEEEEEc-CCCCEEEEEeCCCe----E-------------
Confidence            9999999999999999           78888999999999999999 78888888888877    9             


Q ss_pred             hhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942        192 EWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF  270 (537)
Q Consensus       192 ~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~  270 (537)
                          ++||+       +..... +.     +|  ...|.++   .++|....               +...         
T Consensus       132 ----~vwd~-------~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~---------------~~~~---------  166 (319)
T 3frx_A          132 ----KVWTI-------KGQCLATLL-----GH--NDWVSQV---RVVPNEKA---------------DDDS---------  166 (319)
T ss_dssp             ----EEEET-------TSCEEEEEC-----CC--SSCEEEE---EECCC---------------------C---------
T ss_pred             ----EEEEC-------CCCeEEEEe-----cc--CCcEEEE---EEccCCCC---------------CCCc---------
Confidence                99998       644333 66     89  9999999   88875431               0000         


Q ss_pred             ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                                     ..+++++.|+.|++||+.+.+.     ...+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       167 ---------------~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~  226 (319)
T 3frx_A          167 ---------------VTIISAGNDKMVKAWNLNQFQI-----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA  226 (319)
T ss_dssp             ---------------CEEEEEETTSCEEEEETTTTEE-----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             ---------------cEEEEEeCCCEEEEEECCcchh-----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence                           1455666666666666665543     23456899999999999999999999999999999998


Q ss_pred             CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942        351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS  430 (537)
Q Consensus       351 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  430 (537)
                       ..+.+..+..+ .                                                 .+.+++|+|++.+|+++
T Consensus       227 -~~~~~~~~~~~-~-------------------------------------------------~v~~~~~sp~~~~la~~  255 (319)
T 3frx_A          227 -AKKAMYTLSAQ-D-------------------------------------------------EVFSLAFSPNRYWLAAA  255 (319)
T ss_dssp             -TTEEEEEEECC-S-------------------------------------------------CEEEEEECSSSSEEEEE
T ss_pred             -CCcEEEEecCC-C-------------------------------------------------cEEEEEEcCCCCEEEEE
Confidence             55554444322 1                                                 78889999999999988


Q ss_pred             eCCCcEEEEECCCceeeeEeec--------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        431 SGDATIKLWCLTDYVCLKSLEG--------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       431 ~~dg~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      +. +.+++|++..+..+..+..        |...+.+++|+|||++|++++.||.|++||+.++
T Consensus       256 ~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          256 TA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             ET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             cC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            76 4599999998777666542        4567899999999999999999999999998664

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-39  Score=302.69  Aligned_cols=320  Identities=15%  Similarity=0.224  Sum_probs=234.1

Q ss_pred             ceeeeec-ccc-ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh---h-cCCCcceEEEEEeccccE
Q psy10942         37 KQLRSYP-AYE-SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY---Q-HGLSSPLVRIVRSSVKRM  110 (537)
Q Consensus        37 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~---~-~~~~~~v~~~~~s~~~~~  110 (537)
                      +++.+++ +.+ .+..+  .++|        ++.+|++++.|+.|++||+.+++...   . ..+.+.|.+++|+|++++
T Consensus         6 ~~~~~~~~h~~~~v~~l--~~sp--------~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~   75 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFL--AWNP--------AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY   75 (345)
T ss_dssp             EEEEEECCSTTSCEEEE--EECT--------TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSE
T ss_pred             EEeeeecCCCCCcEEEE--EECC--------CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCE
Confidence            4455555 333 45556  5688        67899999999999999998875322   1 234478999999999999


Q ss_pred             EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCc
Q psy10942        111 YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSH  190 (537)
Q Consensus       111 la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~  190 (537)
                      ||+++.|+++++||+..+.         .+.+..+.+|...|.+++|+ |++++|++++.++.    |            
T Consensus        76 l~s~s~D~~v~iw~~~~~~---------~~~~~~~~~h~~~v~~v~~s-p~~~~l~s~s~D~~----v------------  129 (345)
T 3fm0_A           76 LASASFDATTCIWKKNQDD---------FECVTTLEGHENEVKSVAWA-PSGNLLATCSRDKS----V------------  129 (345)
T ss_dssp             EEEEETTSCEEEEEECCC----------EEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSC----E------------
T ss_pred             EEEEECCCcEEEEEccCCC---------eEEEEEccCCCCCceEEEEe-CCCCEEEEEECCCe----E------------
Confidence            9999999999999987621         35678899999999999999 78889988888877    9            


Q ss_pred             chhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942        191 NEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF  270 (537)
Q Consensus       191 ~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~  270 (537)
                           ++||+       ...........+.+|  ...|.++   +|+|++++|++++.|+.++  +|+......      
T Consensus       130 -----~iwd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~~p~~~~l~s~s~d~~i~--~w~~~~~~~------  184 (345)
T 3fm0_A          130 -----WVWEV-------DEEDEYECVSVLNSH--TQDVKHV---VWHPSQELLASASYDDTVK--LYREEEDDW------  184 (345)
T ss_dssp             -----EEEEE-------CTTSCEEEEEEECCC--CSCEEEE---EECSSSSCEEEEETTSCEE--EEEEETTEE------
T ss_pred             -----EEEEC-------CCCCCeEEEEEecCc--CCCeEEE---EECCCCCEEEEEeCCCcEE--EEEecCCCE------
Confidence                 99998       554321001112289  9999999   9999999999999999999  998765210      


Q ss_pred             ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                                                +.              ...+.+|...|.+++|+|++++|++++.|+.|++|+..
T Consensus       185 --------------------------~~--------------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~  224 (345)
T 3fm0_A          185 --------------------------VC--------------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY  224 (345)
T ss_dssp             --------------------------EE--------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             --------------------------EE--------------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence                                      00              12345788999999999999999999999999999975


Q ss_pred             CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942        351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS  429 (537)
Q Consensus       351 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  429 (537)
                      .......          +.....+.        ..+++..+.+ |..                 .|.+++|+|++..|++
T Consensus       225 ~~~~~~~----------~~~~~~~~--------~~~~~~~~~~~h~~-----------------~v~~v~~~~~~~~l~s  269 (345)
T 3fm0_A          225 LPGNEQG----------VACSGSDP--------SWKCICTLSGFHSR-----------------TIYDIAWCQLTGALAT  269 (345)
T ss_dssp             CTTCTTC----------CCCC---C--------EEEEEEEECSSCSS-----------------CEEEEEECTTTCCEEE
T ss_pred             cCCCCcc----------ceeeccCC--------ccceeEEecCCCCC-----------------cEEEEEEecCCCEEEE
Confidence            2211100          00000000        0112222222 222                 7888999999999999


Q ss_pred             EeCCCcEEEEECCCce---------eeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        430 SSGDATIKLWCLTDYV---------CLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       430 ~~~dg~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ++.|+.|++|+.....         ......+|...|++++|+|++ .+||+++.||+|++|++.+++....+
T Consensus       270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred             EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence            9999999999986532         122335799999999999987 59999999999999999888765544

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=4.4e-39  Score=303.15  Aligned_cols=314  Identities=12%  Similarity=0.104  Sum_probs=220.9

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc------cceEEeeeccce
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE------KSLLHYYETSAV   87 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~wd~~~~   87 (537)
                      .++.++ .++.+.....|++....+.   .+...+.++  .++|        ++.+|++++.      |+.|++|+..++
T Consensus        15 ~~~~~~-~~~g~~~~~~w~~p~~~p~---~H~~~V~~v--~fSp--------DG~~las~s~d~~~~wd~~v~~~~~~~~   80 (357)
T 4g56_B           15 TENLYF-QSNGSSKGSAWGRPVTAPA---CMEVQIGAV--RYRR--------DGALLLAASSLSSRTWGGSIWVFKDPEG   80 (357)
T ss_dssp             -----------------------------CCCSEEEEE--EECS--------SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred             ccceEE-ecCCCccccccCCCCCCcc---cccCCEEEE--EECC--------CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence            344443 4444556788987543321   245667777  5688        7799999987      788999998887


Q ss_pred             ehhhhc-----CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942         88 KELYQH-----GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED  162 (537)
Q Consensus        88 ~~~~~~-----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (537)
                      .....+     .+.+.|.+++|+|++++| +++.|++|+|||+.+++..       ........+|...|.+++|+ |++
T Consensus        81 ~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~-------~~~~~~~~~h~~~V~~v~~s-pdg  151 (357)
T 4g56_B           81 APNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESL-------LVNKFAKYEHDDIVKTLSVF-SDG  151 (357)
T ss_dssp             --CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSCEEEC---------------CCCCEEECCCSSCEEEEEEC-SSS
T ss_pred             CcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeecccccee-------EEEeeccCCCCCCEEEEEEC-CCC
Confidence            655443     344689999999998755 5678999999999884211       11223456899999999999 788


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE  240 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~  240 (537)
                      ++|++++.++.    |                 ++||+       ++++..  +.     +|  ...|.++   +|+|++
T Consensus       152 ~~l~sgs~dg~----v-----------------~iwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~s~~~  193 (357)
T 4g56_B          152 TQAVSGGKDFS----V-----------------KVWDL-------SQKAVLKSYN-----AH--SSEVNCV---AACPGK  193 (357)
T ss_dssp             SEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTC
T ss_pred             CEEEEEeCCCe----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCCEEEE---EEccCC
Confidence            88988888777    9                 99999       877766  77     99  9999999   999987


Q ss_pred             C-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        241 D-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       241 ~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      . ++++++.|+.|+  +||+..+...                                           .   ......|
T Consensus       194 ~~~~~s~~~dg~v~--~wd~~~~~~~-------------------------------------------~---~~~~~~~  225 (357)
T 4g56_B          194 DTIFLSCGEDGRIL--LWDTRKPKPA-------------------------------------------T---RIDFCAS  225 (357)
T ss_dssp             SSCEEEEETTSCEE--ECCTTSSSCB-------------------------------------------C---BCCCTTC
T ss_pred             CceeeeeccCCceE--EEECCCCcee-------------------------------------------e---eeeeccc
Confidence            5 678888888888  8887763210                                           0   1122346


Q ss_pred             CCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        320 EKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       320 ~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      ...+.+++|+|+ +.+|++|+.|+.|++||++ ..+.+..+..|..                                  
T Consensus       226 ~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-~~~~~~~~~~~~~----------------------------------  270 (357)
T 4g56_B          226 DTIPTSVTWHPEKDDTFACGDETGNVSLVNIK-NPDSAQTSAVHSQ----------------------------------  270 (357)
T ss_dssp             CSCEEEEEECTTSTTEEEEEESSSCEEEEESS-CGGGCEEECCCSS----------------------------------
T ss_pred             cccccchhhhhcccceEEEeecccceeEEECC-CCcEeEEEeccce----------------------------------
Confidence            677999999997 4688899999999999988 5555555544433                                  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CCCEEEEEeCCC
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADG  476 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg  476 (537)
                                     .|.+++|+|++ ++|++|+.|++|++||+++++.+..+ +|.+.|++++|+| ++++|++++.||
T Consensus       271 ---------------~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg  334 (357)
T 4g56_B          271 ---------------NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDH  334 (357)
T ss_dssp             ---------------CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred             ---------------eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCC
Confidence                           78889999987 68999999999999999998877665 6999999999998 799999999999


Q ss_pred             cEEEEECCCCe
Q psy10942        477 LLKLWSIKTST  487 (537)
Q Consensus       477 ~v~vwd~~~~~  487 (537)
                      +|++|++.+..
T Consensus       335 ~v~iW~~~~~~  345 (357)
T 4g56_B          335 KVLHHHLPSEG  345 (357)
T ss_dssp             CEEEEECC---
T ss_pred             eEEEEECCCCC
Confidence            99999997643

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.8e-38  Score=297.95  Aligned_cols=312  Identities=14%  Similarity=0.191  Sum_probs=254.6

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.|.+++|+|||++++++..++.+..|....           ........+|...|.+++|+ ++++++++++ ++.   
T Consensus        10 ~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~-dg~---   73 (337)
T 1gxr_A           10 KPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----------HARQINTLNHGEVVCAVTIS-NPTRHVYTGG-KGC---   73 (337)
T ss_dssp             EECCEEEECSSSCEEECCCCTTSSSSTTCCS-----------EEEEEEEECCSSCCCEEEEC-SSSSEEEEEC-BSE---
T ss_pred             CceeEEEECCCCCEEEeecCCCcEeccccCC-----------ccccceeccCCCceEEEEEe-cCCcEEEEcC-CCe---
Confidence            5789999999999999988877777776555           33334445799999999999 7788887776 655   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       +                 ++||+       .+....  +......+|  ...|.++   +|+|++++|++++.|+.++ 
T Consensus        74 -i-----------------~iw~~-------~~~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~-  122 (337)
T 1gxr_A           74 -V-----------------KVWDI-------SHPGNKSPVSQLDCLNR--DNYIRSC---KLLPDGCTLIVGGEASTLS-  122 (337)
T ss_dssp             -E-----------------EEEET-------TSTTCCSCSEEEECSCT--TSBEEEE---EECTTSSEEEEEESSSEEE-
T ss_pred             -E-----------------EEEEC-------CCCCceeeeecccccCC--CCcEEEE---EEcCCCCEEEEEcCCCcEE-
Confidence             9                 99998       655433  221122268  8999999   9999999999998888888 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|++.....                                         ..     ...+..|...|.+++|+|++++
T Consensus       123 -~~d~~~~~~-----------------------------------------~~-----~~~~~~~~~~i~~~~~~~~~~~  155 (337)
T 1gxr_A          123 -IWDLAAPTP-----------------------------------------RI-----KAELTSSAPACYALAISPDSKV  155 (337)
T ss_dssp             -EEECCCC-------------------------------------------EE-----EEEEECSSSCEEEEEECTTSSE
T ss_pred             -EEECCCCCc-----------------------------------------ce-----eeecccCCCceEEEEECCCCCE
Confidence             888766210                                         00     1223467788999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEE----------EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNV----------LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +++++.|+.|++||++ ..+.+..          +..++++..+++++.|+.|++||+++++.+..+....         
T Consensus       156 l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---------  225 (337)
T 1gxr_A          156 CFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS---------  225 (337)
T ss_dssp             EEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---------
T ss_pred             EEEEeCCCcEEEEeCC-CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC---------
Confidence            9999999999999998 4444444          4445678999999999999999999998777664322         


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                               .+.+++|+|+++++++++.++.|++||+.+++. ..+..|...|.+++|+|++++|++++.||.|++||+.
T Consensus       226 ---------~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  295 (337)
T 1gxr_A          226 ---------QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             ---------CEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             ---------ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence                     788899999999999999999999999998765 4667799999999999999999999999999999999


Q ss_pred             CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++.+.. ..|...+           .++   +|+|++++|++++.||.|++|
T Consensus       296 ~~~~~~~-~~~~~~v-----------~~~---~~s~~~~~l~~~~~dg~i~iw  333 (337)
T 1gxr_A          296 YGASIFQ-SKESSSV-----------LSC---DISVDDKYIVTGSGDKKATVY  333 (337)
T ss_dssp             TCCEEEE-EECSSCE-----------EEE---EECTTSCEEEEEETTSCEEEE
T ss_pred             CCeEEEE-ecCCCcE-----------EEE---EECCCCCEEEEecCCCeEEEE
Confidence            9988754 3567778           888   999999999999999999998

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2.9e-39  Score=313.01  Aligned_cols=330  Identities=12%  Similarity=0.053  Sum_probs=257.0

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +++++++++.|+.|++||+.+++....+..+..+....|+|++++||+++.|+.|++||+.+           .+....+
T Consensus        67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----------~~~~~~~  135 (420)
T 3vl1_A           67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNF-----------NLQREID  135 (420)
T ss_dssp             EETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTS-----------CEEEEET
T ss_pred             cCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCC-----------cceeeec
Confidence            66889999999999999999999988888877777778899999999999999999999998           6777788


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRD  223 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~  223 (537)
                      .+|...|.+++|+ +++++|++++.++.    |                 ++||+       .+++..  +.     +| 
T Consensus       136 ~~h~~~v~~~~~~-~~~~~l~s~s~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~h-  180 (420)
T 3vl1_A          136 QAHVSEITKLKFF-PSGEALISSSQDMQ----L-----------------KIWSV-------KDGSNPRTLI-----GH-  180 (420)
T ss_dssp             TSSSSCEEEEEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TTCCCCEEEE-----CC-
T ss_pred             ccccCccEEEEEC-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCcCceEEc-----CC-
Confidence            8999999999999 67888888888777    9                 99999       777666  66     89 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--CcceEEEEEeCCCeEEEEE
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~d~~i~i~~  301 (537)
                       ...|.++   +|+|++++|++++.|+.++  +|++..+.    +     ...+..+..  ..+..+..         ..
T Consensus       181 -~~~v~~~---~~~~~~~~l~s~~~d~~v~--iwd~~~~~----~-----~~~~~~~~~~~~~v~~~~~---------~~  236 (420)
T 3vl1_A          181 -RATVTDI---AIIDRGRNVLSASLDGTIR--LWECGTGT----T-----IHTFNRKENPHDGVNSIAL---------FV  236 (420)
T ss_dssp             -SSCEEEE---EEETTTTEEEEEETTSCEE--EEETTTTE----E-----EEEECBTTBTTCCEEEEEE---------EE
T ss_pred             -CCcEEEE---EEcCCCCEEEEEcCCCcEE--EeECCCCc----e-----eEEeecCCCCCCCccEEEE---------ec
Confidence             9999999   9999999999999999999  99998742    1     222222211  11111111         10


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                       ...       ......+...+.+++|+|++++|++++.||.|++||++ ..+.+..+..                    
T Consensus       237 -~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~--------------------  287 (420)
T 3vl1_A          237 -GTD-------RQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF-SKEQTIQLPS--------------------  287 (420)
T ss_dssp             -CCC-------SSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT-TCCEEEEECC--------------------
T ss_pred             -CCc-------ceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC-CCceeEEccc--------------------
Confidence             111       11223456778888889999899999888888888887 3332222211                    


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCCce-eeeEeec-CCcceE
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTDYV-CLKSLEG-HDASVL  458 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~-~~~~v~  458 (537)
                                 .|..                 .+.+++|+|+++ +|++|+.||.|++||+.+++ ++..+.. |...|.
T Consensus       288 -----------~~~~-----------------~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~  339 (420)
T 3vl1_A          288 -----------KFTC-----------------SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN  339 (420)
T ss_dssp             -----------TTSS-----------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred             -----------ccCC-----------------CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence                       1221                 788999999998 99999999999999999864 4777777 566777


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEECCCCe---------eEEEecCCccceeccCCCCCCccccccceeeecCCC---EEE
Q psy10942        459 RCHFINKGTQIVSTGADGLLKLWSIKTST---------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD---CEY  526 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~l~  526 (537)
                      ++. ++++++|++++.|+.|++|++...+         ....+..|...+           .++   +|+|+++   .|+
T Consensus       340 ~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~~g~l~  404 (420)
T 3vl1_A          340 NVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV-----------SQF---CYVSDDESNGEVL  404 (420)
T ss_dssp             EEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC-----------CEE---EEECCSSSSCEEE
T ss_pred             EEE-eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcce-----------EEE---EEccCCCCcceEE
Confidence            775 5578899999999999999987632         223445666777           888   9999999   788


Q ss_pred             EEeCCCCEEeC
Q psy10942        527 RGGWSPQVVVY  537 (537)
Q Consensus       527 s~~~dg~i~vW  537 (537)
                      +++.+|.+.+|
T Consensus       405 a~g~~g~~~~~  415 (420)
T 3vl1_A          405 EVGKNNFCALY  415 (420)
T ss_dssp             EEETTTEEEEE
T ss_pred             EEcCCceEEEE
Confidence            88889999988

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.3e-38  Score=298.97  Aligned_cols=290  Identities=16%  Similarity=0.186  Sum_probs=222.6

Q ss_pred             hhhcCCC-cceEEEEE-----ec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942         90 LYQHGLS-SPLVRIVR-----SS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED  162 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~-----s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (537)
                      ...+.+| +.|.+++|     ++ ++++||+|+.|++|++||+.....    ..........+.+|...|.+++|+ +++
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~----~~~~~~~~~~l~~h~~~V~~~~~~-~~~   88 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQ----NGYFGIPHKALTGHNHFVSDLALS-QEN   88 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCC----SSBSEEEEEEECCCSSCEEEEEEC-SST
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCc----ccccccccchhccCCCceEEEEEC-CCC
Confidence            3344444 68999999     76 999999999999999999976311    011134567889999999999999 788


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE  240 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~  240 (537)
                      .++++++.++.    |                 ++||+       ++++..  +.     +|  ...|.++   +|+|++
T Consensus        89 ~~l~s~s~D~~----v-----------------~lwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~sp~~  130 (343)
T 2xzm_R           89 CFAISSSWDKT----L-----------------RLWDL-------RTGTTYKRFV-----GH--QSEVYSV---AFSPDN  130 (343)
T ss_dssp             TEEEEEETTSE----E-----------------EEEET-------TSSCEEEEEE-----CC--CSCEEEE---EECSST
T ss_pred             CEEEEEcCCCc----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCcEEEE---EECCCC
Confidence            88888887777    9                 99999       777765  67     99  9999999   999999


Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE  320 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~  320 (537)
                      ++|++++.|+.|+  +|++....                                 .  ..           ......|.
T Consensus       131 ~~l~s~~~d~~i~--~wd~~~~~---------------------------------~--~~-----------~~~~~~~~  162 (343)
T 2xzm_R          131 RQILSAGAEREIK--LWNILGEC---------------------------------K--FS-----------SAEKENHS  162 (343)
T ss_dssp             TEEEEEETTSCEE--EEESSSCE---------------------------------E--EE-----------CCTTTSCS
T ss_pred             CEEEEEcCCCEEE--EEeccCCc---------------------------------e--ee-----------eecccCCC
Confidence            9999999999999  99876410                                 0  00           11123678


Q ss_pred             CCeEEEEEcCCC----------CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        321 KDINCVTVSPND----------KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       321 ~~v~~~~~s~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      ..|.+++|+|++          .+|++++.|+.|++||..  ..                                ....
T Consensus       163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~--------------------------------~~~~  208 (343)
T 2xzm_R          163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQ--------------------------------IRYT  208 (343)
T ss_dssp             SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TE--------------------------------EEEE
T ss_pred             ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--Cc--------------------------------eeEE
Confidence            889999999986          456666666666666632  22                                2333


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEE
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQI  469 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l  469 (537)
                      +..|..                 .|.+++|+|++++|++|+.||.|++||+.. ......+. +...|.+++|+|++.++
T Consensus       209 ~~~h~~-----------------~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l  270 (343)
T 2xzm_R          209 FKAHES-----------------NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWV  270 (343)
T ss_dssp             EECCSS-----------------CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEE
T ss_pred             EcCccc-----------------cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEE
Confidence            333433                 788999999999999999999999999954 44444443 55679999999999887


Q ss_pred             EEEeCCCcEEEEECCCCeeEE--Eec-----------CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        470 VSTGADGLLKLWSIKTSTCVS--TFD-----------KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +++ .|+.|++|++.+++...  .+.           +|...+           .++   +|+|+|++|++|+.||.|++
T Consensus       271 a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~sp~g~~l~sg~~Dg~v~~  335 (343)
T 2xzm_R          271 AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC-----------TSL---AWNALGKKLFAGFTDGVIRT  335 (343)
T ss_dssp             EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE-----------EEE---EECSSSCCEEEEETTSEEEE
T ss_pred             EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce-----------EEE---EECCCCCeEEEecCCceEEE
Confidence            755 57789999998776543  443           455666           788   99999999999999999999


Q ss_pred             C
Q psy10942        537 Y  537 (537)
Q Consensus       537 W  537 (537)
                      |
T Consensus       336 w  336 (343)
T 2xzm_R          336 F  336 (343)
T ss_dssp             E
T ss_pred             E
Confidence            8

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.1e-38  Score=303.10  Aligned_cols=316  Identities=16%  Similarity=0.224  Sum_probs=244.5

Q ss_pred             EEEEEcCccce-----eeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCc-----
Q psy10942         28 LFTWDLSSRKQ-----LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSS-----   97 (537)
Q Consensus        28 v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~-----   97 (537)
                      ..+|+....+.     .+.+.+...+.++  .++|        +++++++++ ++.+++|++.+++.+..+..+.     
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v--~fsp--------dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~  110 (393)
T 1erj_A           42 YILYNPALPREIDVELHKSLDHTSVVCCV--KFSN--------DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD  110 (393)
T ss_dssp             EEEECTTSCCCEEEEEEEEEECSSCCCEE--EECT--------TSSEEEEEC-BSCEEEEETTTCCEEEEECC-------
T ss_pred             EEEECCCCCcccCceeEEecCCCCEEEEE--EECC--------CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccc
Confidence            44676554332     2344566777777  5688        668888877 7889999999988876665431     


Q ss_pred             --------------ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942         98 --------------PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS  163 (537)
Q Consensus        98 --------------~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  163 (537)
                                    .|.+++|+|+|++||+++.|+.|++||+.+           .+....+.+|...|.+++|+ +++.
T Consensus       111 ~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~-p~~~  178 (393)
T 1erj_A          111 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN-----------RKIVMILQGHEQDIYSLDYF-PSGD  178 (393)
T ss_dssp             ----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT-----------TEEEEEECCCSSCEEEEEEC-TTSS
T ss_pred             cccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCC-----------CcEEEEEccCCCCEEEEEEc-CCCC
Confidence                          499999999999999999999999999998           68888999999999999999 7888


Q ss_pred             cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc-CCC
Q psy10942        164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK-EED  241 (537)
Q Consensus       164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~-~~~  241 (537)
                      .|++++.++.    |                 ++||+       .++++. ..     .+  ...+.++   +|+| +++
T Consensus       179 ~l~s~s~d~~----v-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~  220 (393)
T 1erj_A          179 KLVSGSGDRT----V-----------------RIWDL-------RTGQCSLTL-----SI--EDGVTTV---AVSPGDGK  220 (393)
T ss_dssp             EEEEEETTSE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EECSTTCC
T ss_pred             EEEEecCCCc----E-----------------EEEEC-------CCCeeEEEE-----Ec--CCCcEEE---EEECCCCC
Confidence            8888888777    9                 99999       777766 33     45  6789999   9999 899


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      +|++++.|+.++  +|++..+..                                +...+..         .....+|..
T Consensus       221 ~l~~~s~d~~v~--iwd~~~~~~--------------------------------~~~~~~~---------~~~~~~h~~  257 (393)
T 1erj_A          221 YIAAGSLDRAVR--VWDSETGFL--------------------------------VERLDSE---------NESGTGHKD  257 (393)
T ss_dssp             EEEEEETTSCEE--EEETTTCCE--------------------------------EEEEC---------------CCCSS
T ss_pred             EEEEEcCCCcEE--EEECCCCcE--------------------------------EEeeccc---------ccCCCCCCC
Confidence            999999999999  999876310                                1111100         112357889


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      .|.+++|+|++++|++++.|+.|++||+... ........                    ...+.+...+.+|..     
T Consensus       258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~-~~~~~~~~--------------------~~~~~~~~~~~~h~~-----  311 (393)
T 1erj_A          258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA-NNKSDSKT--------------------PNSGTCEVTYIGHKD-----  311 (393)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEEC------------------------------------CEEEEEECCSS-----
T ss_pred             CEEEEEECCCCCEEEEEeCCCEEEEEECCCC-CCcccccC--------------------CCCCcceEEEecccC-----
Confidence            9999999999999999999999999999832 21111110                    011233344445554     


Q ss_pred             EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec------CCCEEEEEeCC
Q psy10942        402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN------KGTQIVSTGAD  475 (537)
Q Consensus       402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~s~~~d  475 (537)
                                  .|.+++|+|++++|++|+.|+.|++||+.+++++..+.+|.+.|.+++|++      ++++|++++.|
T Consensus       312 ------------~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D  379 (393)
T 1erj_A          312 ------------FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD  379 (393)
T ss_dssp             ------------CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred             ------------cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCC
Confidence                        678889999999999999999999999999999999999999999999986      68899999999


Q ss_pred             CcEEEEECCC
Q psy10942        476 GLLKLWSIKT  485 (537)
Q Consensus       476 g~v~vwd~~~  485 (537)
                      |+|++|++..
T Consensus       380 g~i~iW~~~~  389 (393)
T 1erj_A          380 CKARIWKYKK  389 (393)
T ss_dssp             SEEEEEEEEE
T ss_pred             CcEEECcccc
Confidence            9999999754

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2.8e-38  Score=296.59  Aligned_cols=317  Identities=12%  Similarity=0.115  Sum_probs=257.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCc-cceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS-RKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|.+++|+  |||++++++..++.+..|+... .+.+....+.+++..+  .+.|        +++++++++ +|.|++
T Consensus        10 ~~v~~~~~s--~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~l~~~~-dg~i~i   76 (337)
T 1gxr_A           10 KPAYSFHVT--ADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAV--TISN--------PTRHVYTGG-KGCVKV   76 (337)
T ss_dssp             EECCEEEEC--SSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEE--EECS--------SSSEEEEEC-BSEEEE
T ss_pred             CceeEEEEC--CCCCEEEeecCCCcEeccccCCccccceeccCCCceEEE--EEec--------CCcEEEEcC-CCeEEE
Confidence            368899999  8999999988777676765544 4555566788888888  5677        668899998 999999


Q ss_pred             eeccceehhhhc------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         82 YETSAVKELYQH------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        82 wd~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      ||+.+++....+      .+...|.+++|+|++++|++++.|+.|++||+.+++         ......+..|...+.++
T Consensus        77 w~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---------~~~~~~~~~~~~~i~~~  147 (337)
T 1gxr_A           77 WDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT---------PRIKAELTSSAPACYAL  147 (337)
T ss_dssp             EETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEE
T ss_pred             EECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC---------cceeeecccCCCceEEE
Confidence            999887644333      345799999999999999999999999999998831         22566788899999999


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~  233 (537)
                      +|+ ++++.+++++.++.    +                 ++||+       ++++..  +.     +|  ...|.++  
T Consensus       148 ~~~-~~~~~l~~~~~dg~----v-----------------~~~d~-------~~~~~~~~~~-----~~--~~~i~~~--  189 (337)
T 1gxr_A          148 AIS-PDSKVCFSCCSDGN----I-----------------AVWDL-------HNQTLVRQFQ-----GH--TDGASCI--  189 (337)
T ss_dssp             EEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE--
T ss_pred             EEC-CCCCEEEEEeCCCc----E-----------------EEEeC-------CCCceeeeee-----cc--cCceEEE--
Confidence            999 67888888877766    9                 99999       776655  66     89  9999999  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                       +|+|++++|++++.|+.++  +|++...                                           +....   
T Consensus       190 -~~~~~~~~l~~~~~dg~i~--~~d~~~~-------------------------------------------~~~~~---  220 (337)
T 1gxr_A          190 -DISNDGTKLWTGGLDNTVR--SWDLREG-------------------------------------------RQLQQ---  220 (337)
T ss_dssp             -EECTTSSEEEEEETTSEEE--EEETTTT-------------------------------------------EEEEE---
T ss_pred             -EECCCCCEEEEEecCCcEE--EEECCCC-------------------------------------------ceEee---
Confidence             9999999999988888888  8877662                                           11100   


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  393 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  393 (537)
                         ..+...+.+++|+|+++++++++.|+.|++||+.. .+. ..+..                                
T Consensus       221 ---~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~-~~~-~~~~~--------------------------------  263 (337)
T 1gxr_A          221 ---HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK-PDK-YQLHL--------------------------------  263 (337)
T ss_dssp             ---EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-SCE-EEECC--------------------------------
T ss_pred             ---ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CCe-EEEcC--------------------------------
Confidence               12456789999999999999999999999999983 221 11222                                


Q ss_pred             CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe
Q psy10942        394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG  473 (537)
Q Consensus       394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  473 (537)
                      |..                 .+.+++|+|++++|++++.||.|++||+.+++.+.... |...|.+++|+|++++|++++
T Consensus       264 ~~~-----------------~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~  325 (337)
T 1gxr_A          264 HES-----------------CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGS  325 (337)
T ss_dssp             CSS-----------------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEE
T ss_pred             Ccc-----------------ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEec
Confidence            221                 78899999999999999999999999999988875544 888999999999999999999


Q ss_pred             CCCcEEEEEC
Q psy10942        474 ADGLLKLWSI  483 (537)
Q Consensus       474 ~dg~v~vwd~  483 (537)
                      .||.|++|++
T Consensus       326 ~dg~i~iw~~  335 (337)
T 1gxr_A          326 GDKKATVYEV  335 (337)
T ss_dssp             TTSCEEEEEE
T ss_pred             CCCeEEEEEE
Confidence            9999999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=3e-37  Score=289.99  Aligned_cols=295  Identities=18%  Similarity=0.216  Sum_probs=235.6

Q ss_pred             eccceehhhhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         83 ETSAVKELYQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        83 d~~~~~~~~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      ..++.++..++++| +.|++++|+|+ +++||+|+.|++|+|||+...+.      ....+.+.+.+|...|.+++|+ +
T Consensus        24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~------~~~~~~~~l~~h~~~V~~~~~s-~   96 (340)
T 4aow_A           24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET------NYGIPQRALRGHSHFVSDVVIS-S   96 (340)
T ss_dssp             --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS------CSEEEEEEECCCSSCEEEEEEC-T
T ss_pred             cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc------ccceeeEEEeCCCCCEEEEEEC-C
Confidence            34555566678766 69999999998 68999999999999999987321      1134567889999999999999 7


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      ++++|++++.++.    +                 ++|+.       ......  ..     .+  ...+...   .+++
T Consensus        97 dg~~l~s~~~d~~----i-----------------~~~~~-------~~~~~~~~~~-----~~--~~~~~~~---~~~~  138 (340)
T 4aow_A           97 DGQFALSGSWDGT----L-----------------RLWDL-------TTGTTTRRFV-----GH--TKDVLSV---AFSS  138 (340)
T ss_dssp             TSSEEEEEETTSE----E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECT
T ss_pred             CCCEEEEEccccc----c-----------------eEEee-------cccceeeeec-----CC--CCceeEE---EEee
Confidence            8889988888777    8                 88888       555544  44     56  6778888   8889


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++++|++++.|+.++  +|+.....                                           ..    ......
T Consensus       139 ~~~~l~s~s~d~~~~--~~d~~~~~-------------------------------------------~~----~~~~~~  169 (340)
T 4aow_A          139 DNRQIVSGSRDKTIK--LWNTLGVC-------------------------------------------KY----TVQDES  169 (340)
T ss_dssp             TSSCEEEEETTSCEE--EECTTSCE-------------------------------------------EE----EECSSS
T ss_pred             cCccceeecCCCeEE--EEEeCCCc-------------------------------------------eE----EEEecc
Confidence            999999998888888  88876521                                           00    112346


Q ss_pred             cCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942        319 HEKDINCVTVSPND--KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  396 (537)
Q Consensus       319 ~~~~v~~~~~s~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  396 (537)
                      |...+..++|++++  .++++++.|+.|++||+. ..+.+..+..|..                                
T Consensus       170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~-~~~~~~~~~~h~~--------------------------------  216 (340)
T 4aow_A          170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKTNHIGHTG--------------------------------  216 (340)
T ss_dssp             CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TTEEEEEECCCSS--------------------------------
T ss_pred             ccCcccceEEccCCCCcEEEEEcCCCEEEEEECC-CCceeeEecCCCC--------------------------------
Confidence            78889999998864  567888888888888888 5555555544443                                


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  476 (537)
                                       .|.+++|+|++++|++|+.|+.|++||+.+.+.+..+..+ ..|.+++|+|++.+ ++++.|+
T Consensus       217 -----------------~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~-~~~~~d~  277 (340)
T 4aow_A          217 -----------------YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYW-LCAATGP  277 (340)
T ss_dssp             -----------------CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSE-EEEEETT
T ss_pred             -----------------cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCce-eeccCCC
Confidence                             7889999999999999999999999999999999988854 67999999998765 5566799


Q ss_pred             cEEEEECCCCeeEEEec---------CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        477 LLKLWSIKTSTCVSTFD---------KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       477 ~v~vwd~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .|++||++++..+..+.         +|...|           +++   +|+|||++|++|+.||.|+||
T Consensus       278 ~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~l---~~s~dg~~l~sgs~Dg~v~iW  333 (340)
T 4aow_A          278 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQC-----------TSL---AWSADGQTLFAGYTDNLVRVW  333 (340)
T ss_dssp             EEEEEETTTTEEEEEECCC-------CCCCCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred             EEEEEECCCCeEEEeccccceeeeccCCCCCE-----------EEE---EECCCCCEEEEEeCCCEEEEE
Confidence            99999999988777664         456667           888   999999999999999999999

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=7.8e-38  Score=293.65  Aligned_cols=307  Identities=17%  Similarity=0.205  Sum_probs=230.4

Q ss_pred             eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-------ehhhhcCCC-cceEEEEEecccc
Q psy10942         39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV-------KELYQHGLS-SPLVRIVRSSVKR  109 (537)
Q Consensus        39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~-------~~~~~~~~~-~~v~~~~~s~~~~  109 (537)
                      ...+. +...+..+.|.+.+.    .+.++.+|++++.|+.|++||+.+.       .....+..| ..|.+++|+|++.
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~----~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~   89 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQK----ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC   89 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSS----TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred             eeeeccchhhhhheeeEEEee----cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence            33444 556677773322210    0116689999999999999999753       344555555 6899999999999


Q ss_pred             EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCC
Q psy10942        110 MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRS  189 (537)
Q Consensus       110 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~  189 (537)
                      +|++++.|++|++||+.+           ++....+.+|...|.+++|+ |++++|++++.++.    |           
T Consensus        90 ~l~s~s~D~~v~lwd~~~-----------~~~~~~~~~h~~~v~~v~~s-p~~~~l~s~~~d~~----i-----------  142 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRT-----------GTTYKRFVGHQSEVYSVAFS-PDNRQILSAGAERE----I-----------  142 (343)
T ss_dssp             EEEEEETTSEEEEEETTS-----------SCEEEEEECCCSCEEEEEEC-SSTTEEEEEETTSC----E-----------
T ss_pred             EEEEEcCCCcEEEEECCC-----------CcEEEEEcCCCCcEEEEEEC-CCCCEEEEEcCCCE----E-----------
Confidence            999999999999999998           67888999999999999999 78888888887777    9           


Q ss_pred             cchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc
Q psy10942        190 HNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI  269 (537)
Q Consensus       190 ~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~  269 (537)
                            ++||+       .... ........+|  ...|.++   +|+|++....        .  + ....        
T Consensus       143 ------~~wd~-------~~~~-~~~~~~~~~~--~~~v~~~---~~~~~~~~~~--------~--~-~~~~--------  184 (343)
T 2xzm_R          143 ------KLWNI-------LGEC-KFSSAEKENH--SDWVSCV---RYSPIMKSAN--------K--V-QPFA--------  184 (343)
T ss_dssp             ------EEEES-------SSCE-EEECCTTTSC--SSCEEEE---EECCCCCSCS--------C--C-CSSC--------
T ss_pred             ------EEEec-------cCCc-eeeeecccCC--Cceeeee---eecccccccc--------c--c-CCCC--------
Confidence                  99998       5322 2111122378  8999999   9999864211        1  0 0000        


Q ss_pred             cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942        270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST  349 (537)
Q Consensus       270 ~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~  349 (537)
                                      .++++++.|+.|++||... ..     ...+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus       185 ----------------~~l~s~~~d~~i~iwd~~~-~~-----~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~  242 (343)
T 2xzm_R          185 ----------------PYFASVGWDGRLKVWNTNF-QI-----RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI  242 (343)
T ss_dssp             ----------------CEEEEEETTSEEEEEETTT-EE-----EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred             ----------------CEEEEEcCCCEEEEEcCCC-ce-----eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence                            3688888999999999432 22     3345789999999999999999999999999999999


Q ss_pred             cCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942        350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS  429 (537)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  429 (537)
                      .........+. +.                                .                 .+.+++|+|+++++++
T Consensus       243 ~~~~~~~~~~~-~~--------------------------------~-----------------~v~~v~~sp~~~~la~  272 (343)
T 2xzm_R          243 LNLTYPQREFD-AG--------------------------------S-----------------TINQIAFNPKLQWVAV  272 (343)
T ss_dssp             SCCSSCSEEEE-CS--------------------------------S-----------------CEEEEEECSSSCEEEE
T ss_pred             CCCcccceeec-CC--------------------------------C-----------------cEEEEEECCCCCEEEE
Confidence            52322222111 00                                0                 6788999999988876


Q ss_pred             EeCCCcEEEEECCCceeee--Eee-----------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        430 SSGDATIKLWCLTDYVCLK--SLE-----------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       430 ~~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      + .|+.|++||+.+++...  .+.           +|...|.+++|+|++++|++|+.||.|++|++++++
T Consensus       273 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          273 G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA  342 (343)
T ss_dssp             E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred             E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence            5 57889999998765443  333           678889999999999999999999999999987653

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-37  Score=293.90  Aligned_cols=290  Identities=14%  Similarity=0.084  Sum_probs=248.2

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.+.|.+++|+|++++|++++.|+.|++||+.+           .+.+..+.+|...|.+++|+ +++++|++++.++. 
T Consensus        31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~-   97 (369)
T 3zwl_B           31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN-----------GERLGTLDGHTGTIWSIDVD-CFTKYCVTGSADYS-   97 (369)
T ss_dssp             CSSCEEEEEECTTSCEEEEEESSSCEEEEETTT-----------CCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTTE-
T ss_pred             eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-----------chhhhhhhhcCCcEEEEEEc-CCCCEEEEEeCCCe-
Confidence            346899999999999999999999999999998           78889999999999999999 68888888887777 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC----
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME----  249 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d----  249 (537)
                         |                 ++||+       .+++.. ..     .+  ...|.++   +|+|+++++++++.+    
T Consensus        98 ---i-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~~~~~~  140 (369)
T 3zwl_B           98 ---I-----------------KLWDV-------SNGQCVATW-----KS--PVPVKRV---EFSPCGNYFLAILDNVMKN  140 (369)
T ss_dssp             ---E-----------------EEEET-------TTCCEEEEE-----EC--SSCEEEE---EECTTSSEEEEEECCBTTB
T ss_pred             ---E-----------------EEEEC-------CCCcEEEEe-----ec--CCCeEEE---EEccCCCEEEEecCCccCC
Confidence               9                 99999       777776 33     47  7899999   999999999999998    


Q ss_pred             -CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC--CeEEE
Q psy10942        250 -PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK--DINCV  326 (537)
Q Consensus       250 -~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~v~~~  326 (537)
                       +.+.  +|++........                             +.....   ..     ...+..|..  .+.++
T Consensus       141 ~g~i~--~~d~~~~~~~~~-----------------------------~~~~~~---~~-----~~~~~~~~~~~~~~~~  181 (369)
T 3zwl_B          141 PGSIN--IYEIERDSATHE-----------------------------LTKVSE---EP-----IHKIITHEGLDAATVA  181 (369)
T ss_dssp             CCEEE--EEEEEECTTTCC-----------------------------EEEECS---SC-----SEEEECCTTCCCEEEE
T ss_pred             CCEEE--EEEecCCcccee-----------------------------eccccc---ce-----eeeccCCcCccceeEE
Confidence             9999  999887422110                             111110   01     112234444  89999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD  406 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  406 (537)
                      +|+|++++|++++.||.|++||+......+..+..|..                                          
T Consensus       182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------------------------------  219 (369)
T 3zwl_B          182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK------------------------------------------  219 (369)
T ss_dssp             EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS------------------------------------------
T ss_pred             EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC------------------------------------------
Confidence            99999999999999999999999844566666655543                                          


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC----------
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG----------  476 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------  476 (537)
                             .+.+++|+|++++|++++.|+.|++||+.+++.+..+. +...+..++|+|+++++++++.++          
T Consensus       220 -------~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  291 (369)
T 3zwl_B          220 -------SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN  291 (369)
T ss_dssp             -------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred             -------ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence                   88899999999999999999999999999999998888 778899999999999999999988          


Q ss_pred             ----cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        477 ----LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       477 ----~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                          .+++||..+++.+..+.+|...|           .++   +|+|++++|++++.||.|+||
T Consensus       292 ~~~~~i~~~d~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~s~~~dg~v~iw  342 (369)
T 3zwl_B          292 EGKFEARFYHKIFEEEIGRVQGHFGPL-----------NTV---AISPQGTSYASGGEDGFIRLH  342 (369)
T ss_dssp             ---CEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECTTSSEEEEEETTSEEEEE
T ss_pred             CCcceeEEEecCCCcchhheecccCcE-----------EEE---EECCCCCEEEEEcCCCeEEEE
Confidence                89999999999999999999999           999   999999999999999999998

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=4.8e-37  Score=284.63  Aligned_cols=285  Identities=16%  Similarity=0.226  Sum_probs=237.6

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL  122 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i  122 (537)
                      +..++..+  .+.|        +++++++++.|+.|++|++.+++....+..| ..|.+++|+|++++|++++.|+.|++
T Consensus        22 h~~~v~~~--~~s~--------~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v   91 (312)
T 4ery_A           22 HTKAVSSV--KFSP--------NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI   91 (312)
T ss_dssp             CSSCEEEE--EECT--------TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             cCCcEEEE--EECC--------CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence            55677777  5678        6689999999999999999999888888765 68999999999999999999999999


Q ss_pred             EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942        123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL  202 (537)
Q Consensus       123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~  202 (537)
                      ||+.+           .+.+..+.+|...|.+++|+ ++++++++++.++.    |                 ++||+  
T Consensus        92 wd~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~d~~----i-----------------~iwd~--  136 (312)
T 4ery_A           92 WDVSS-----------GKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDES----V-----------------RIWDV--  136 (312)
T ss_dssp             EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEET--
T ss_pred             EECCC-----------CcEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCc----E-----------------EEEEC--
Confidence            99998           68888999999999999999 77888888887777    9                 99999  


Q ss_pred             Hhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        203 EAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       203 ~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                           ++++..  +.     .|  ..+|.++   +|+|++++|++++.|+.++  +|++..+.                 
T Consensus       137 -----~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--~wd~~~~~-----------------  182 (312)
T 4ery_A          137 -----KTGKCLKTLP-----AH--SDPVSAV---HFNRDGSLIVSSSYDGLCR--IWDTASGQ-----------------  182 (312)
T ss_dssp             -----TTCCEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTCC-----------------
T ss_pred             -----CCCEEEEEec-----CC--CCcEEEE---EEcCCCCEEEEEeCCCcEE--EEECCCCc-----------------
Confidence                 777665  66     89  9999999   9999999999999999988  88877621                 


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  360 (537)
                                                ..    ......+...+..++|+|++++|++++.|+.|++||+. ..+.+..+.
T Consensus       183 --------------------------~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~  231 (312)
T 4ery_A          183 --------------------------CL----KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYT  231 (312)
T ss_dssp             --------------------------EE----EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT-TTEEEEEEC
T ss_pred             --------------------------ee----eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEEEE
Confidence                                      10    00112345678999999999999999999999999998 556555555


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                      .|...                                ..              .+......+++++|++|+.||.|++||
T Consensus       232 ~~~~~--------------------------------~~--------------~~~~~~~~~~~~~l~sg~~dg~i~vwd  265 (312)
T 4ery_A          232 GHKNE--------------------------------KY--------------CIFANFSVTGGKWIVSGSEDNLVYIWN  265 (312)
T ss_dssp             SSCCS--------------------------------SS--------------CCCEEEECSSSCEEEECCTTSCEEEEE
T ss_pred             ecCCc--------------------------------eE--------------EEEEEEEeCCCcEEEEECCCCEEEEEE
Confidence            44321                                00              122223346788999999999999999


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIK  484 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~  484 (537)
                      +.+++.+..+.+|...|.+++|+|++++|++++  .|+.|++|+.+
T Consensus       266 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          266 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             CCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            999999999999999999999999999999997  69999999864

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-37  Score=287.92  Aligned_cols=305  Identities=15%  Similarity=0.195  Sum_probs=219.9

Q ss_pred             ccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce--ehhhhc--C-CCcceEEEEEeccc
Q psy10942         35 SRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV--KELYQH--G-LSSPLVRIVRSSVK  108 (537)
Q Consensus        35 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~--~~~~~~--~-~~~~v~~~~~s~~~  108 (537)
                      +.++++.+. +.+++.++  .+.|        +  +|++++.|+.|++||+.++  +.+..+  . +.+.|.+++|+|++
T Consensus         3 ~~~~~~~~~~h~~~v~~~--~~s~--------~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~   70 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSF--DFSQ--------G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT   70 (330)
T ss_dssp             CCEEEEEEECCSSCEEEE--EEET--------T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS
T ss_pred             ccccceeeccCCCceeee--ccCC--------C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC
Confidence            344555555 55667777  4455        4  8999999999999999875  334434  2 44689999999999


Q ss_pred             cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCC
Q psy10942        109 RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANR  188 (537)
Q Consensus       109 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~  188 (537)
                      ++||+++.|++|++||+.....    .....+....+.+|...|.+++|+ |++++|++++.++.    |          
T Consensus        71 ~~las~s~D~~v~iw~~~~~~~----~~~~~~~~~~~~~h~~~V~~v~~s-p~g~~las~s~D~~----v----------  131 (330)
T 2hes_X           71 SLLAAGSFDSTVSIWAKEESAD----RTFEMDLLAIIEGHENEVKGVAWS-NDGYYLATCSRDKS----V----------  131 (330)
T ss_dssp             SEEEEEETTSCEEEEEC-----------CCCEEEEEEC----CEEEEEEC-TTSCEEEEEETTSC----E----------
T ss_pred             CEEEEEeCCCcEEEEEcccCcC----ccccceeEEEEcCCCCcEEEEEEC-CCCCEEEEEeCCCE----E----------
Confidence            9999999999999999864210    001145677889999999999999 78889988888877    9          


Q ss_pred             CcchhhHHHHHHHHHhhhcccc----ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCC
Q psy10942        189 SHNEWFDKTFERILEAKFKQSS----SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTY  262 (537)
Q Consensus       189 ~~~~~~~~~wd~~~~~~~~~~~----~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~  262 (537)
                             ++||+       ...    ++.  +.     +|  ...|.++   +|+|++++|++++.|+.|+  +|+...+
T Consensus       132 -------~iwd~-------~~~~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~~l~s~s~D~~i~--iW~~~~~  185 (330)
T 2hes_X          132 -------WIWET-------DESGEEYECISVLQ-----EH--SQDVKHV---IWHPSEALLASSSYDDTVR--IWKDYDD  185 (330)
T ss_dssp             -------EEEEC-------CTTCCCCEEEEEEC-----CC--SSCEEEE---EECSSSSEEEEEETTSCEE--EEEEETT
T ss_pred             -------EEEec-------cCCCCCeEEEEEec-----cC--CCceEEE---EECCCCCEEEEEcCCCeEE--EEECCCC
Confidence                   99998       432    222  55     89  9999999   9999999999999999999  9987652


Q ss_pred             CcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeC
Q psy10942        263 HFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSL  340 (537)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~  340 (537)
                      .                                         .+.     ...+.+|...|.+++|+|+  +.+|++++.
T Consensus       186 ~-----------------------------------------~~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~  219 (330)
T 2hes_X          186 D-----------------------------------------WEC-----VAVLNGHEGTVWSSDFDKTEGVFRLCSGSD  219 (330)
T ss_dssp             E-----------------------------------------EEE-----EEEECCCSSCEEEEEECCSSSSCEEEEEET
T ss_pred             C-----------------------------------------eeE-----EEEccCCCCcEEEEEecCCCCeeEEEEEeC
Confidence            0                                         000     2234678899999999998  778999999


Q ss_pred             CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        341 DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       341 d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                      |++|++||+.....         ...           ..|     .....+.. |..                 .|.+++
T Consensus       220 D~~v~iw~~~~~~~---------~~~-----------~~~-----~~~~~~~~~h~~-----------------~v~~v~  257 (330)
T 2hes_X          220 DSTVRVWKYMGDDE---------DDQ-----------QEW-----VCEAILPDVHKR-----------------QVYNVA  257 (330)
T ss_dssp             TSCEEEEEEEEECT---------TSC-----------EEE-----EEEEECCSCCSS-----------------CEEEEE
T ss_pred             CCeEEEEEecCCCc---------ccc-----------cee-----EEeeeccccccc-----------------ceEEEE
Confidence            99999999872110         000           000     11112222 333                 678888


Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCce--eeeE-eecCCc-ceEEEEEec--CCCEEEEEeCCCcEEEEECCC
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYV--CLKS-LEGHDA-SVLRCHFIN--KGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~-~~~~~~-~v~~~~~s~--~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      |++++ +|++++.||.|++||..+++  .... +.+|.. .|.+++|+|  ++++|++++.||+|++||+++
T Consensus       258 ~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          258 WGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             ECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            88665 78999999999999998764  3333 356877 899999999  789999999999999999864

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-38  Score=311.66  Aligned_cols=345  Identities=8%  Similarity=0.021  Sum_probs=233.0

Q ss_pred             eeeeeeeeeccCCc-------ceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942          3 FCVTCFDVIPQITS-------EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE   75 (537)
Q Consensus         3 ~~V~~~~~~~~~~~-------~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (537)
                      ..|.+++|+|.+++       ++|++++.++..                 .       ...|        +..++++++.
T Consensus       134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------~-------~~~~--------~~~~laS~s~  181 (524)
T 2j04_B          134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------E-------PLNE--------HLEMFDKEKH  181 (524)
T ss_dssp             C--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------------------------
T ss_pred             CceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------C-------ccch--------hhhhhccCCC
Confidence            46889999965422       788888765420                 0       0134        6678999999


Q ss_pred             cceEEeeeccceehh----hhcCC-CcceEEEEEecc------ccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         76 KSLLHYYETSAVKEL----YQHGL-SSPLVRIVRSSV------KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~----~~~~~-~~~v~~~~~s~~------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      |+.|++||+.+++..    ..+.+ .+.|.+++|+|+      +.+||+++.|++|++||+.++................
T Consensus       182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~  261 (524)
T 2j04_B          182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT  261 (524)
T ss_dssp             CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred             CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence            999999999887642    22333 368999999997      5799999999999999998742110000011223457


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---cccccccc
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLG  221 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~  221 (537)
                      +.+|...|.+++|++ + +.|++++.++.    |                 ++||+       +++...   +.     +
T Consensus       262 l~~h~~~v~sv~~s~-~-~~lasgs~Dgt----V-----------------~lWD~-------~~~~~~~~~~~-----~  306 (524)
T 2j04_B          262 LSLADSLITTFDFLS-P-TTVVCGFKNGF----V-----------------AEFDL-------TDPEVPSFYDQ-----V  306 (524)
T ss_dssp             ECCTTTCEEEEEESS-S-SEEEEEETTSE----E-----------------EEEET-------TBCSSCSEEEE-----C
T ss_pred             EEcCCCCEEEEEecC-C-CeEEEEeCCCE----E-----------------EEEEC-------CCCCCceEEee-----c
Confidence            889999999999994 3 47888887777    9                 99999       765332   56     9


Q ss_pred             CCCcCeEEEEeccC--cccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEE
Q psy10942        222 RDELKTVTLLERGK--TVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVK  298 (537)
Q Consensus       222 h~~~~~v~~~~~~~--~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~  298 (537)
                      |  ...|.++   +  |+|++ .+|++++.|++++  +||+....    +     ...                      
T Consensus       307 H--~~~V~sv---~~~~s~~g~~~laS~S~D~tvk--lWD~~~~~----~-----~~~----------------------  348 (524)
T 2j04_B          307 H--DSYILSV---STAYSDFEDTVVSTVAVDGYFY--IFNPKDIA----T-----TKT----------------------  348 (524)
T ss_dssp             S--SSCEEEE---EEECCTTSCCEEEEEETTSEEE--EECGGGHH----H-----HCE----------------------
T ss_pred             c--cccEEEE---EEEcCCCCCeEEEEeccCCeEE--EEECCCCC----c-----ccc----------------------
Confidence            9  9999998   5  67887 8899999999999  99987631    1     000                      


Q ss_pred             EEECCCCceeeeeecccccccC--CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942        299 VWSTTGGLKLLNVLRGHKKGHE--KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL  376 (537)
Q Consensus       299 i~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~  376 (537)
                                       +.+|.  ..|.+++|+|+++.+++++.|++|++||++ ....+..+..|..            
T Consensus       349 -----------------~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~-~~~~~~~l~gH~~------------  398 (524)
T 2j04_B          349 -----------------TVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR-AAFAVHPLVSRET------------  398 (524)
T ss_dssp             -----------------EEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT-CTTCCEEEEECSS------------
T ss_pred             -----------------cccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc-ccccceeeecCCC------------
Confidence                             11121  247789999999999999999999999998 4444455555554            


Q ss_pred             EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec----
Q psy10942        377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG----  452 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----  452 (537)
                                                           .|++++|+|++++|++|+.|++|++||+... .+..++.    
T Consensus       399 -------------------------------------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~  440 (524)
T 2j04_B          399 -------------------------------------TITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSAT  440 (524)
T ss_dssp             -------------------------------------CEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------
T ss_pred             -------------------------------------ceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccc
Confidence                                                 8899999999999999999999999998653 2222221    


Q ss_pred             -CCcceEEEEEecCCCEEEEEeCCCcEEEEECC-CCeeEEEecCCccceeccCCCCCCccccccceeeecCCC---EEEE
Q psy10942        453 -HDASVLRCHFINKGTQIVSTGADGLLKLWSIK-TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD---CEYR  527 (537)
Q Consensus       453 -~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~l~s  527 (537)
                       +...+.+++|+|+++.+. ...  .+++|+.. ++.++..+.+|...|           .++   +|+|+++   +||+
T Consensus       441 ~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V-----------~~V---afsp~~~~~~~lAs  503 (524)
T 2j04_B          441 QKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINI-----------TCT---KWNETSAGGKCYAF  503 (524)
T ss_dssp             CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSC-----------CCE---EECCSTTTTTEEEE
T ss_pred             eeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceE-----------EEE---ECCCCCCccHHHHh
Confidence             112477999999998553 322  23444433 577888999999999           999   9999965   9999


Q ss_pred             EeCCCCEEeC
Q psy10942        528 GGWSPQVVVY  537 (537)
Q Consensus       528 ~~~dg~i~vW  537 (537)
                      |+.||.||||
T Consensus       504 g~~~g~vrlw  513 (524)
T 2j04_B          504 SNSAGLLTLE  513 (524)
T ss_dssp             ECTTSEEEEE
T ss_pred             hccCceEEEE
Confidence            9999999998

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=4.5e-36  Score=281.93  Aligned_cols=293  Identities=19%  Similarity=0.269  Sum_probs=227.0

Q ss_pred             Cccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----hhhhcCCC-cceEEEEEec
Q psy10942         34 SSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----ELYQHGLS-SPLVRIVRSS  106 (537)
Q Consensus        34 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~~-~~v~~~~~s~  106 (537)
                      ++.++..++. |...|.++  .+.|.       ++++|++++.|+.|++||+.+++     ....+..| +.|.+++|+|
T Consensus        26 ~~~~l~~tL~GH~~~V~~v--~~sp~-------~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~   96 (340)
T 4aow_A           26 EQMTLRGTLKGHNGWVTQI--ATTPQ-------FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS   96 (340)
T ss_dssp             CEEEEEEEECCCSSCEEEE--EECTT-------CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT
T ss_pred             CceEEEEEECCccCCEEEE--EEeCC-------CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC
Confidence            3444555666 67778888  56885       56799999999999999997654     34455554 6999999999


Q ss_pred             cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeeccc
Q psy10942        107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGA  186 (537)
Q Consensus       107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~  186 (537)
                      ++++|++++.|+.|++|+...           .........+...+..+.++ +++..+++++.++.    +        
T Consensus        97 dg~~l~s~~~d~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d~~----~--------  152 (340)
T 4aow_A           97 DGQFALSGSWDGTLRLWDLTT-----------GTTTRRFVGHTKDVLSVAFS-SDNRQIVSGSRDKT----I--------  152 (340)
T ss_dssp             TSSEEEEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSC----E--------
T ss_pred             CCCEEEEEcccccceEEeecc-----------cceeeeecCCCCceeEEEEe-ecCccceeecCCCe----E--------
Confidence            999999999999999999998           56677777777778888888 77888888887776    8        


Q ss_pred             CCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCC--CeeeeccCCCcceeccccccC
Q psy10942        187 NRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEE--DLFPRQSMEPSTLEELEKRKT  261 (537)
Q Consensus       187 ~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~~~~~d~~i~~~iw~~~~  261 (537)
                               ++||.       ......   +.     +|  ...+..+   +|++++  .+++++               
T Consensus       153 ---------~~~d~-------~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~~~~s~---------------  191 (340)
T 4aow_A          153 ---------KLWNT-------LGVCKYTVQDE-----SH--SEWVSCV---RFSPNSSNPIIVSC---------------  191 (340)
T ss_dssp             ---------EEECT-------TSCEEEEECSS-----SC--SSCEEEE---EECSCSSSCEEEEE---------------
T ss_pred             ---------EEEEe-------CCCceEEEEec-----cc--cCcccce---EEccCCCCcEEEEE---------------
Confidence                     99998       544333   44     78  8888888   777654  233444               


Q ss_pred             CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC
Q psy10942        262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD  341 (537)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  341 (537)
                                                    +.|+.|++||+.+.+.     ...+.+|...|++++|+|++++|++++.|
T Consensus       192 ------------------------------~~d~~i~i~d~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~s~D  236 (340)
T 4aow_A          192 ------------------------------GWDKLVKVWNLANCKL-----KTNHIGHTGYLNTVTVSPDGSLCASGGKD  236 (340)
T ss_dssp             ------------------------------ETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ------------------------------cCCCEEEEEECCCCce-----eeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence                                          4455555555555543     23346788999999999999999999999


Q ss_pred             CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942        342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS  421 (537)
Q Consensus       342 ~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s  421 (537)
                      +.|++||+. ..+.+..+..+.                                                  .+.+++|+
T Consensus       237 g~i~iwd~~-~~~~~~~~~~~~--------------------------------------------------~v~~~~~~  265 (340)
T 4aow_A          237 GQAMLWDLN-EGKHLYTLDGGD--------------------------------------------------IINALCFS  265 (340)
T ss_dssp             CEEEEEETT-TTEEEEEEECSS--------------------------------------------------CEEEEEEC
T ss_pred             CeEEEEEec-cCceeeeecCCc--------------------------------------------------eEEeeecC
Confidence            999999998 555544443221                                                  67788899


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCceeeeEee---------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        422 PLDRILISSSGDATIKLWCLTDYVCLKSLE---------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      |++.+++ ++.|+.|++||++++..+..+.         +|...|++++|+|++++|++|+.||.|+|||+++|+
T Consensus       266 ~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          266 PNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             SSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             CCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            9877554 5568999999999877766553         678899999999999999999999999999999885

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=7.2e-37  Score=291.18  Aligned_cols=298  Identities=13%  Similarity=0.102  Sum_probs=237.9

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccc--eeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILK--FRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      +.+.|.+++|+|++++||+++.|+.|++||+.+           .+  ....+.+|...|.+++|+ ++++++++++.++
T Consensus         7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~~dg   74 (372)
T 1k8k_C            7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG-----------NKWVQVHELKEHNGQVTGVDWA-PDSNRIVTCGTDR   74 (372)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEET-----------TEEEEEEEEECCSSCEEEEEEE-TTTTEEEEEETTS
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----------CcEEeeeeecCCCCcccEEEEe-CCCCEEEEEcCCC
Confidence            346899999999999999999999999999998           44  788899999999999999 6888888888776


Q ss_pred             ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        173 LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       173 ~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                      .    |                 ++||+       .+.+..    +.     .|  ...|.++   +|+|++++|++++.
T Consensus        75 ~----i-----------------~vwd~-------~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~  116 (372)
T 1k8k_C           75 N----A-----------------YVWTL-------KGRTWKPTLVIL-----RI--NRAARCV---RWAPNEKKFAVGSG  116 (372)
T ss_dssp             C----E-----------------EEEEE-------ETTEEEEEEECC-----CC--SSCEEEE---EECTTSSEEEEEET
T ss_pred             e----E-----------------EEEEC-------CCCeeeeeEEee-----cC--CCceeEE---EECCCCCEEEEEeC
Confidence            6    9                 99998       666533    35     78  8999999   99999999999999


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      |+.++  +|++......                                .+        .    ......|...|.+++|
T Consensus       117 d~~v~--i~d~~~~~~~--------------------------------~~--------~----~~~~~~~~~~i~~~~~  150 (372)
T 1k8k_C          117 SRVIS--ICYFEQENDW--------------------------------WV--------C----KHIKKPIRSTVLSLDW  150 (372)
T ss_dssp             TSSEE--EEEEETTTTE--------------------------------EE--------E----EEECTTCCSCEEEEEE
T ss_pred             CCEEE--EEEecCCCcc--------------------------------ee--------e----eeeecccCCCeeEEEE
Confidence            99999  9988773210                                00        0    1122467888999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE--ECCCCeeeeeeccCCcceEEEEEecC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW--SIKTSTCVSTFDKHALKIWTLAITKD  406 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~  406 (537)
                      +|++++|++++.|+.|++||+........     +.            ...|  ....++.+..+..|..          
T Consensus       151 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-----~~------------~~~~~~~~~~~~~~~~~~~~~~----------  203 (372)
T 1k8k_C          151 HPNSVLLAAGSCDFKCRIFSAYIKEVEER-----PA------------PTPWGSKMPFGELMFESSSSCG----------  203 (372)
T ss_dssp             CTTSSEEEEEETTSCEEEEECCCTTTSCC-----CC------------CBTTBSCCCTTCEEEECCCCSS----------
T ss_pred             cCCCCEEEEEcCCCCEEEEEccccccccc-----cc------------ccccccccchhhheEecCCCCC----------
Confidence            99999999999999999999862110000     00            0000  1223455555555544          


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC-
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT-  485 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~-  485 (537)
                             .+.+++|+|++++|++++.|+.|++||+.+++++..+..|...|.+++|+|++++|+++ .|+.|++|++.+ 
T Consensus       204 -------~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~  275 (372)
T 1k8k_C          204 -------WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSA  275 (372)
T ss_dssp             -------CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETT
T ss_pred             -------eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCc
Confidence                   78889999999999999999999999999999999999999999999999999988877 899999999987 


Q ss_pred             -Cee--E------------------------------------EEe-cCCccceeccCCCCCCccccccceeee-cCC--
Q psy10942        486 -STC--V------------------------------------STF-DKHALKIRNSDSENDHKGFGLPRQLCS-RNS--  522 (537)
Q Consensus       486 -~~~--~------------------------------------~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s-~~~--  522 (537)
                       ++.  +                                    ..+ .+|...|           +++   +|+ ++|  
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~---~~~~~~g~~  341 (372)
T 1k8k_C          276 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV-----------SQI---SVLSGGKAK  341 (372)
T ss_dssp             TTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE-----------EEE---EEEESTTTS
T ss_pred             CceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc-----------cee---EEecCCCcc
Confidence             421  0                                    222 3777777           888   866 666  


Q ss_pred             -CEEEEEeCCCCEEeC
Q psy10942        523 -DCEYRGGWSPQVVVY  537 (537)
Q Consensus       523 -~~l~s~~~dg~i~vW  537 (537)
                       ++|++++.||.|++|
T Consensus       342 ~~~l~s~~~Dg~i~~W  357 (372)
T 1k8k_C          342 CSQFCTTGMDGGMSIW  357 (372)
T ss_dssp             CSEEEEEETTSEEEEE
T ss_pred             eeeEEEecCCCceEEE
Confidence             999999999999999

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=3.4e-37  Score=294.48  Aligned_cols=293  Identities=14%  Similarity=0.083  Sum_probs=229.1

Q ss_pred             eeeccceehhhhcCCC-cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhh
Q psy10942         81 YYETSAVKELYQHGLS-SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIA  156 (537)
Q Consensus        81 ~wd~~~~~~~~~~~~~-~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~  156 (537)
                      +|++.+.+....+..| +.|.+++|+|++ ++||+++.|+.|++||+.+           .+....+.  +|...|.+++
T Consensus        57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~~~~~h~~~v~~~~  125 (383)
T 3ei3_B           57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV-----------QNKTSFIQGMGPGDAITGMK  125 (383)
T ss_dssp             HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS-----------TTCEEEECCCSTTCBEEEEE
T ss_pred             cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC-----------cccceeeecCCcCCceeEEE
Confidence            4444555555555544 699999999999 9999999999999999998           45555554  6999999999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccC
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGK  235 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~  235 (537)
                      |+|.+++.+++++.++.    |                 ++||+       ...... +.  ...+|  ...|.++   +
T Consensus       126 ~~~~~~~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~--~~~~~--~~~v~~~---~  170 (383)
T 3ei3_B          126 FNQFNTNQLFVSSIRGA----T-----------------TLRDF-------SGSVIQVFA--KTDSW--DYWYCCV---D  170 (383)
T ss_dssp             EETTEEEEEEEEETTTE----E-----------------EEEET-------TSCEEEEEE--CCCCS--SCCEEEE---E
T ss_pred             eCCCCCCEEEEEeCCCE----E-----------------EEEEC-------CCCceEEEe--ccCCC--CCCeEEE---E
Confidence            99547788888887777    9                 99999       643333 32  11145  5889999   9


Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                      |+|++++|++++.|+.++  +|++...                                            .     ...
T Consensus       171 ~~~~~~~l~~~~~d~~i~--i~d~~~~--------------------------------------------~-----~~~  199 (383)
T 3ei3_B          171 VSVSRQMLATGDSTGRLL--LLGLDGH--------------------------------------------E-----IFK  199 (383)
T ss_dssp             EETTTTEEEEEETTSEEE--EEETTSC--------------------------------------------E-----EEE
T ss_pred             ECCCCCEEEEECCCCCEE--EEECCCC--------------------------------------------E-----EEE
Confidence            999999999998888888  8877320                                            1     122


Q ss_pred             ccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCC---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        316 KKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      +..|...|.+++|+|+++ +|++++.|+.|++||++..   ...+..+ .|..                           
T Consensus       200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~---------------------------  251 (383)
T 3ei3_B          200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK---------------------------  251 (383)
T ss_dssp             EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS---------------------------
T ss_pred             eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC---------------------------
Confidence            346888999999999999 9999999999999999832   2222222 2221                           


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEeecCC----------------
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSLEGHD----------------  454 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------  454 (537)
                                            .+.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|.                
T Consensus       252 ----------------------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  309 (383)
T 3ei3_B          252 ----------------------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHP  309 (383)
T ss_dssp             ----------------------CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECS
T ss_pred             ----------------------ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccC
Confidence                                  789999999 99999999999999999999988877777553                


Q ss_pred             -cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC--ccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        455 -ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH--ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       455 -~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                       ..+..++|+|++++  +++.|+.|++||+.+++++..+.+|  ...+           ..+   +|+|++++|++++ |
T Consensus       310 ~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~-----------~~~---~~s~~g~~l~s~s-d  372 (383)
T 3ei3_B          310 MYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGII-----------SLN---KFSPTGDVLASGM-G  372 (383)
T ss_dssp             SSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCC-----------CEE---EECTTSSEEEEEE-T
T ss_pred             CCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceE-----------EEE---EEecCccEEEEec-C
Confidence             23444666666665  6778999999999999999999874  4566           677   9999999999997 9


Q ss_pred             CCEEeC
Q psy10942        532 PQVVVY  537 (537)
Q Consensus       532 g~i~vW  537 (537)
                      |.|+||
T Consensus       373 ~~i~iw  378 (383)
T 3ei3_B          373 FNILIW  378 (383)
T ss_dssp             TEEEEE
T ss_pred             CcEEEE
Confidence            999998

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.9e-36  Score=293.90  Aligned_cols=305  Identities=21%  Similarity=0.346  Sum_probs=242.0

Q ss_pred             hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         90 LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      ...+..| +.+.. +++++|++|++++.|+.|++||+.+           ++....+.+|...|.+++|+   ++.++++
T Consensus       111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~-----------~~~~~~~~~h~~~v~~~~~~---~~~l~s~  175 (445)
T 2ovr_B          111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT-----------GKCLRTLVGHTGGVWSSQMR---DNIIISG  175 (445)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT-----------CCEEEECCCCSSCEEEEEEE---TTEEEEE
T ss_pred             eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCC-----------CcEEEEEcCCCCCEEEEEec---CCEEEEE
Confidence            3444444 34433 3666799999999999999999998           78889999999999999997   5678888


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      +.++.    |                 ++||+       .+++..  +.     +|  ...|.++   .++  ++.++++
T Consensus       176 ~~dg~----i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~--~~~l~s~  215 (445)
T 2ovr_B          176 STDRT----L-----------------KVWNA-------ETGECIHTLY-----GH--TSTVRCM---HLH--EKRVVSG  215 (445)
T ss_dssp             ETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EEE--TTEEEEE
T ss_pred             eCCCe----E-----------------EEEEC-------CcCcEEEEEC-----CC--CCcEEEE---Eec--CCEEEEE
Confidence            77766    9                 99999       777766  66     89  9999999   763  4567777


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.|+.++  +|++..                                           ++.     ...+.+|...|.++
T Consensus       216 s~dg~i~--~wd~~~-------------------------------------------~~~-----~~~~~~~~~~v~~~  245 (445)
T 2ovr_B          216 SRDATLR--VWDIET-------------------------------------------GQC-----LHVLMGHVAAVRCV  245 (445)
T ss_dssp             ETTSEEE--EEESSS-------------------------------------------CCE-----EEEEECCSSCEEEE
T ss_pred             eCCCEEE--EEECCC-------------------------------------------CcE-----EEEEcCCcccEEEE
Confidence            7766666  666654                                           222     12234577778888


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      +|  +++++++++.|+.|++||+. ..+.+..+..|.        ++..+++++.|+.|++||+++++.+..+..|..  
T Consensus       246 ~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--  320 (445)
T 2ovr_B          246 QY--DGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--  320 (445)
T ss_dssp             EE--CSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCS--
T ss_pred             EE--CCCEEEEEcCCCEEEEEECC-CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc--
Confidence            87  67788888888888888887 555555555443        367788888888888888888888888777765  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceEEEEEecCCCEEEEEeCC
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                                     .+.++.+  +++++++++.||.|++||+.+++.+..+..   |...|++++|+  +++|++++.|
T Consensus       321 ---------------~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d  381 (445)
T 2ovr_B          321 ---------------LTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDD  381 (445)
T ss_dssp             ---------------CEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETT
T ss_pred             ---------------cEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCC
Confidence                           3444444  466899999999999999999999999986   88899999995  5799999999


Q ss_pred             CcEEEEECCCCeeEEEe-----cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC----EEeC
Q psy10942        476 GLLKLWSIKTSTCVSTF-----DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ----VVVY  537 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~----i~vW  537 (537)
                      |.|++||+.+++.+..+     .+|...|           +++   +|+|++.+|++++.||.    |.||
T Consensus       382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~la~~~~dg~~~~~l~v~  438 (445)
T 2ovr_B          382 GTVKLWDLKTGEFIRNLVTLESGGSGGVV-----------WRI---RASNTKLVCAVGSRNGTEETKLLVL  438 (445)
T ss_dssp             SEEEEEETTTCCEEEEEEECTTGGGTCEE-----------EEE---EECSSEEEEEEECSSSSSCCEEEEE
T ss_pred             CeEEEEECCCCceeeeeeccccCCCCceE-----------EEE---EecCCEEEEEEcccCCCCccEEEEE
Confidence            99999999999999888     4677788           888   99999999999999998    8776

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.1e-36  Score=310.05  Aligned_cols=295  Identities=20%  Similarity=0.239  Sum_probs=233.0

Q ss_pred             CcceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         96 SSPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        96 ~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      .+.|++++|+|++ ++|++|+.|++|++||+.....      ......+.+.+|...|.+++|+ +++++|++++.++. 
T Consensus       382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~------~~~~~~~~~~~h~~~v~~v~~s-~~g~~l~sgs~Dg~-  453 (694)
T 3dm0_A          382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK------AYGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGE-  453 (694)
T ss_dssp             SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT------CSCEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSE-
T ss_pred             CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc------ccccccceecCCCCcEEEEEEC-CCCCEEEEEeCCCc-
Confidence            3689999999875 6899999999999999976311      1134567889999999999999 78889988888877 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         |                 ++||+       .++...  +.     +|  ...|.++   +|+|++++|++++.|++|
T Consensus       454 ---v-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~s~~~~~l~s~s~D~~i  496 (694)
T 3dm0_A          454 ---L-----------------RLWDL-------AAGVSTRRFV-----GH--TKDVLSV---AFSLDNRQIVSASRDRTI  496 (694)
T ss_dssp             ---E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECTTSSCEEEEETTSCE
T ss_pred             ---E-----------------EEEEC-------CCCcceeEEe-----CC--CCCEEEE---EEeCCCCEEEEEeCCCEE
Confidence               9                 99999       777665  67     99  9999999   999999999999999999


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      +  +|+.....                                ..   .+          .....+|...|.+++|+|++
T Consensus       497 ~--iwd~~~~~--------------------------------~~---~~----------~~~~~~h~~~v~~~~~~~~~  529 (694)
T 3dm0_A          497 K--LWNTLGEC--------------------------------KY---TI----------SEGGEGHRDWVSCVRFSPNT  529 (694)
T ss_dssp             E--EECTTSCE--------------------------------EE---EE----------CSSTTSCSSCEEEEEECSCS
T ss_pred             E--EEECCCCc--------------------------------ce---ee----------ccCCCCCCCcEEEEEEeCCC
Confidence            9  99875410                                00   00          11234688899999999986


Q ss_pred             --CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce
Q psy10942        333 --KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI  410 (537)
Q Consensus       333 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  410 (537)
                        ..|++++.|+.|++||++ ..+....+..|..                                              
T Consensus       530 ~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~h~~----------------------------------------------  562 (694)
T 3dm0_A          530 LQPTIVSASWDKTVKVWNLS-NCKLRSTLAGHTG----------------------------------------------  562 (694)
T ss_dssp             SSCEEEEEETTSCEEEEETT-TCCEEEEECCCSS----------------------------------------------
T ss_pred             CcceEEEEeCCCeEEEEECC-CCcEEEEEcCCCC----------------------------------------------
Confidence              578999999999999987 4444444444433                                              


Q ss_pred             EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                         .|.+++|+|++++|++|+.||.|++||+.+++.+..+.. ...|.+++|+|++.+|++++ |+.|++||+++++.+.
T Consensus       563 ---~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~  637 (694)
T 3dm0_A          563 ---YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE  637 (694)
T ss_dssp             ---CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             ---CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence               788999999999999999999999999999999888874 56799999999998888776 5569999999999988


Q ss_pred             EecCCccceeccCC-----C---CCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        491 TFDKHALKIRNSDS-----E---NDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       491 ~~~~~~~~i~~~~~-----~---~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+..+.........     .   .....+++   +|||||++|++++.||.|+||
T Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~spdg~~l~sgs~Dg~i~iW  689 (694)
T 3dm0_A          638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSL---NWSADGSTLFSGYTDGVIRVW  689 (694)
T ss_dssp             EECCCCC----------------CCCCEEEE---EECTTSSEEEEEETTSEEEEE
T ss_pred             hhccccccccccccccccccCCceeEEeeeE---EEcCCCCEEEEEcCCCeEEEE
Confidence            87654321100000     0   00001455   999999999999999999999

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3.7e-36  Score=288.92  Aligned_cols=298  Identities=14%  Similarity=0.136  Sum_probs=239.0

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC----C---ccEEE
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE----D---SHIVV  167 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~---~~l~~  167 (537)
                      +.+.|.+++|+|  ++|++++.|+.|++||+.+...     ..+......+.+|...|.+++|+ ++    +   .+|++
T Consensus        15 h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~g~~~~~l~s   86 (397)
T 1sq9_A           15 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHKSGLHHVDVL-QAIERDAFELCLVAT   86 (397)
T ss_dssp             SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT-----CCGGGGEEEEECCTTCEEEEEEE-EEEETTTEEEEEEEE
T ss_pred             hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc-----ccCCCcceEEecCCCcEEEEEEe-cccccCCccccEEEE
Confidence            336999999999  7999999999999999998310     11123678888999999999999 55    7   78888


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-----c--ccccccccCCCc-----CeEEEEeccC
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-----Q--KHNTERLGRDEL-----KTVTLLERGK  235 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-----~--l~~~~~~~h~~~-----~~v~~~~~~~  235 (537)
                      ++.++.    |                 ++||+       .+.+.     .  +.     +|  .     ..|.++   +
T Consensus        87 ~~~dg~----i-----------------~iw~~-------~~~~~~~~~~~~~~~-----~~--~~~~~~~~v~~~---~  128 (397)
T 1sq9_A           87 TSFSGD----L-----------------LFYRI-------TREDETKKVIFEKLD-----LL--DSDMKKHSFWAL---K  128 (397)
T ss_dssp             EETTSC----E-----------------EEEEE-------EECTTTCCEEEEEEC-----CS--CTTGGGSCEEEE---E
T ss_pred             EcCCCC----E-----------------EEEEc-------cCCcccccccceeec-----cc--ccccCCCcEEEE---E
Confidence            877766    9                 99999       76664     3  44     66  5     889999   9


Q ss_pred             cc----cCCCe-eeeccCCCcceeccccccCCCcc--cccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942        236 TV----KEEDL-FPRQSMEPSTLEELEKRKTYHFP--LFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL  308 (537)
Q Consensus       236 ~s----~~~~~-l~~~~~d~~i~~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~  308 (537)
                      |+    |++++ |++++.|+.++  +|++......  ...     .. +..      ...+.+.                
T Consensus       129 ~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~-----~~-~~~------~~~~~~~----------------  178 (397)
T 1sq9_A          129 WGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLT-----LN-WSP------TLELQGT----------------  178 (397)
T ss_dssp             EECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTT-----TC-CCC------EEEEEEE----------------
T ss_pred             EeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccce-----ee-ccC------cceeeee----------------
Confidence            99    99999 99999999999  9998872110  000     00 000      0000000                


Q ss_pred             eeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe---c---CCCCEEEEEcCCCcEEEEEC
Q psy10942        309 LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG---H---KKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~---~~~~~l~~~~~d~~i~i~d~  382 (537)
                          ......|...|.+++|+|++ +|++++.|+.|++||++ ..+.+..+..   |   ..                  
T Consensus       179 ----~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~h~~~~~------------------  234 (397)
T 1sq9_A          179 ----VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS-TLRPLYNFESQHSMINNSN------------------  234 (397)
T ss_dssp             ----ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT-TTEEEEEEECCC---CCCC------------------
T ss_pred             ----eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC-CCceeEEEeccccccccCC------------------
Confidence                01124578889999999999 99999999999999998 5566655554   3   22                  


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeeeEeec-------
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLKSLEG-------  452 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~-------  452 (537)
                                                     .+.+++|+|++++|++++.|   +.|++||+.+++.+..+.+       
T Consensus       235 -------------------------------~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~  283 (397)
T 1sq9_A          235 -------------------------------SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA  283 (397)
T ss_dssp             -------------------------------CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred             -------------------------------ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc
Confidence                                           78999999999999999999   9999999999999999998       


Q ss_pred             ------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec------CC---------------ccceeccCCC
Q psy10942        453 ------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD------KH---------------ALKIRNSDSE  505 (537)
Q Consensus       453 ------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~------~~---------------~~~i~~~~~~  505 (537)
                            |...|.+++|+|++++|++++.||.|++||+.+++.+..+.      +|               ...|      
T Consensus       284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v------  357 (397)
T 1sq9_A          284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV------  357 (397)
T ss_dssp             --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE------
T ss_pred             cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCce------
Confidence                  99999999999999999999999999999999999999999      77               7778      


Q ss_pred             CCCccccccceeeecCC----------CEEEEEeCCCCEEeC
Q psy10942        506 NDHKGFGLPRQLCSRNS----------DCEYRGGWSPQVVVY  537 (537)
Q Consensus       506 ~~~~~~~~~~~~~s~~~----------~~l~s~~~dg~i~vW  537 (537)
                           .++   +|+|++          ++|++++.||.|++|
T Consensus       358 -----~~~---~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw  391 (397)
T 1sq9_A          358 -----FDV---KFLKKGWRSGMGADLNESLCCVCLDRSIRWF  391 (397)
T ss_dssp             -----EEE---EEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred             -----eEE---EeccccccccccccccceEEEecCCCcEEEE
Confidence                 888   999999          799999999999998

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.4e-35  Score=290.95  Aligned_cols=317  Identities=19%  Similarity=0.185  Sum_probs=248.2

Q ss_pred             hcCCC-cc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         92 QHGLS-SP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        92 ~~~~~-~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      .+..| +. +.++.+  ++++|++|+.|+.|++||+.+           .+.+..+.+|.+.|.+++|+ +++ .+++++
T Consensus       116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~-----------~~~~~~~~~h~~~V~~l~~~-~~~-~l~s~s  180 (464)
T 3v7d_B          116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN-----------KKFLLQLSGHDGGVWALKYA-HGG-ILVSGS  180 (464)
T ss_dssp             EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-----------TEEEEEECCCSSCEEEEEEC-STT-EEEEEE
T ss_pred             EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC-----------CcEEEEEeCCCcCEEEEEEc-CCC-EEEEEe
Confidence            34444 34 455554  678999999999999999998           78889999999999999998 444 777777


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcc--cCCCeeee
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTV--KEEDLFPR  245 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s--~~~~~l~~  245 (537)
                      .++.    |                 ++||+       +++++.  +.     +|  ...|.++   +|+  ++++++++
T Consensus       181 ~dg~----i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~l---~~~~~~~~~~l~s  222 (464)
T 3v7d_B          181 TDRT----V-----------------RVWDI-------KKGCCTHVFE-----GH--NSTVRCL---DIVEYKNIKYIVT  222 (464)
T ss_dssp             TTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EEEESSSCEEEEE
T ss_pred             CCCC----E-----------------EEEEC-------CCCcEEEEEC-----CC--CCccEEE---EEecCCCCCEEEE
Confidence            7766    9                 99999       777766  66     89  9999999   888  57899999


Q ss_pred             ccCCCcceeccccccCCCccccccccc--------------ccceeeeeeCC--cc----eEEEEEeCCCeEEEEECCCC
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVP--------------EAEHGAFYTGG--TV----ELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~--------------~~~~~~~~~~~--~v----~~l~~~~~d~~i~i~~~~~~  305 (537)
                      ++.|+.++  +|++.............              ....+.+|...  ++    +.+++++.|+.|++||+.++
T Consensus       223 ~s~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~  300 (464)
T 3v7d_B          223 GSRDNTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM  300 (464)
T ss_dssp             EETTSCEE--EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred             EcCCCcEE--EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            99999999  99998754221100000              01122223221  11    68999999999999999988


Q ss_pred             ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      +..     ..+.+|...|.+++|+|+++++++++.|+.|++||+. ..+.+..+..|..                     
T Consensus       301 ~~~-----~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~---------------------  353 (464)
T 3v7d_B          301 KCL-----YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NGELMYTLQGHTA---------------------  353 (464)
T ss_dssp             EEE-----EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECCCSS---------------------
T ss_pred             cEE-----EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCcEEEEEeCCCC---------------------
Confidence            763     4457899999999999999999999999999999998 5555555544433                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                                                  .+.+++|+  +++|++++.||.|++||+.+++...... |...+..++|+|+
T Consensus       354 ----------------------------~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~  402 (464)
T 3v7d_B          354 ----------------------------LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVS  402 (464)
T ss_dssp             ----------------------------CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEEC
T ss_pred             ----------------------------cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeC
Confidence                                        67777776  4799999999999999999987766665 6677888999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        466 GTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       466 ~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++|++++ ||.|++||+++++.+.. +..|...|           .++   +|+ +..++++++.||.+.+|
T Consensus       403 ~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v-----------~~v---~~~-~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          403 DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI-----------WSV---NFK-GKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE-----------EEE---EEE-TTEEEEEEEETTEEEEE
T ss_pred             CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE-----------EEE---Eec-CCEEEEEEEeCCeEEEE
Confidence            99999998 89999999999999886 66788888           888   997 44455566677776654

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.9e-35  Score=279.09  Aligned_cols=299  Identities=13%  Similarity=0.079  Sum_probs=203.6

Q ss_pred             cceEEEEEeccccEEEEEeC-------CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         97 SPLVRIVRSSVKRMYAVVTA-------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      -+|.+++|+||+++||+|+.       ++.|++|++........... .......+.+|...|.+++++   ++.++++.
T Consensus        15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~-~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~   90 (365)
T 4h5i_A           15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQF-HILSEFALEDNDDSPTAIDAS---KGIILVGC   90 (365)
T ss_dssp             SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHE-EEEEEEECCTTSCCCCEEEEE---TTEEEEEC
T ss_pred             CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeee-eeeeEEEccCCCCceEEEEeC---CCEEEEEE
Confidence            47999999999999999875       34699999986422110000 011122466788888887765   55666666


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc----cccccc------ccccccccCCCcCeEEEEeccCcccC
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK----QSSSQQ------KHNTERLGRDELKTVTLLERGKTVKE  239 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~----~~~~~~------l~~~~~~~h~~~~~v~~~~~~~~s~~  239 (537)
                      .+..    .                 ++|+.......+    ......      ........+  ...+.++   +|+||
T Consensus        91 ~~~~----~-----------------~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v---~fSpD  144 (365)
T 4h5i_A           91 NENS----T-----------------KITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNA--DDYTKLV---YISRE  144 (365)
T ss_dssp             CCCH----H-----------------HHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCT--TCCEEEE---EECTT
T ss_pred             CCCc----c-----------------EEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCc--ccCEEEE---EEcCC
Confidence            5554    5                 555540000000    111100      000011133  4557777   78888


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      |+++++++                                           ++.|++|++||+++++....     + .|
T Consensus       145 g~~la~as-------------------------------------------~~~d~~i~iwd~~~~~~~~~-----~-~~  175 (365)
T 4h5i_A          145 GTVAAIAS-------------------------------------------SKVPAIMRIIDPSDLTEKFE-----I-ET  175 (365)
T ss_dssp             SSCEEEEE-------------------------------------------SCSSCEEEEEETTTTEEEEE-----E-EC
T ss_pred             CCEEEEEE-------------------------------------------CCCCCEEEEeECCCCcEEEE-----e-CC
Confidence            87765322                                           22344455555555443221     1 36


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      ...|.+++|+|||+++++++.+ .+.+|+...........                               ...|..   
T Consensus       176 ~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~-------------------------------~~~~~~---  220 (365)
T 4h5i_A          176 RGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT-------------------------------DFDKNW---  220 (365)
T ss_dssp             SSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC-------------------------------CCCTTE---
T ss_pred             CCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee-------------------------------cCCCCC---
Confidence            6789999999999999998855 46666665232221111                               111221   


Q ss_pred             EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC----cEEEEECCCcee----eeEeecCCcceEEEEEecCCCEEEE
Q psy10942        400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDA----TIKLWCLTDYVC----LKSLEGHDASVLRCHFINKGTQIVS  471 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s  471 (537)
                                    .+.+++|+|+++++++++.|+    .+++|++.....    ...+.+|...|++++|+|||++||+
T Consensus       221 --------------~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las  286 (365)
T 4h5i_A          221 --------------SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL  286 (365)
T ss_dssp             --------------EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred             --------------CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence                          688899999999999998887    688898876543    4567789999999999999999999


Q ss_pred             EeCCCcEEEEECCCCeeEEEe-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        472 TGADGLLKLWSIKTSTCVSTF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       472 ~~~dg~v~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+.|++|+|||+++++++..+ .+|...|           +++   +|||||++|||++.|++||||
T Consensus       287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~V-----------~~v---~fSpdg~~laS~S~D~tvrvw  339 (365)
T 4h5i_A          287 ASNDNSIALVKLKDLSMSKIFKQAHSFAI-----------TEV---TISPDSTYVASVSAANTIHII  339 (365)
T ss_dssp             EETTSCEEEEETTTTEEEEEETTSSSSCE-----------EEE---EECTTSCEEEEEETTSEEEEE
T ss_pred             EcCCCEEEEEECCCCcEEEEecCcccCCE-----------EEE---EECCCCCEEEEEeCCCeEEEE
Confidence            999999999999999999875 7899999           999   999999999999999999998

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.1e-35  Score=289.73  Aligned_cols=292  Identities=19%  Similarity=0.293  Sum_probs=242.8

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      ++.++++++.||.|++||+.+++.+..+..| +.|.+++|+  +++|++++.|+.|++||+.+           ++....
T Consensus       128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~-----------~~~~~~  194 (445)
T 2ovr_B          128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET-----------GECIHT  194 (445)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-----------TEEEEE
T ss_pred             cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc-----------CcEEEE
Confidence            4468999999999999999999999888866 689999997  56899999999999999998           688889


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +.+|...|.+++|+   ++.+++++.++.    |                 ++||+       .+++..  +.     +|
T Consensus       195 ~~~h~~~v~~~~~~---~~~l~s~s~dg~----i-----------------~~wd~-------~~~~~~~~~~-----~~  238 (445)
T 2ovr_B          195 LYGHTSTVRCMHLH---EKRVVSGSRDAT----L-----------------RVWDI-------ETGQCLHVLM-----GH  238 (445)
T ss_dssp             ECCCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEES-------SSCCEEEEEE-----CC
T ss_pred             ECCCCCcEEEEEec---CCEEEEEeCCCE----E-----------------EEEEC-------CCCcEEEEEc-----CC
Confidence            99999999999997   566888887777    9                 99999       777766  66     89


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...|.++   ++  +++++++++.|+.++  +|++..+                                        
T Consensus       239 --~~~v~~~---~~--~~~~l~~~~~dg~i~--iwd~~~~----------------------------------------  269 (445)
T 2ovr_B          239 --VAAVRCV---QY--DGRRVVSGAYDFMVK--VWDPETE----------------------------------------  269 (445)
T ss_dssp             --SSCEEEE---EE--CSSCEEEEETTSCEE--EEEGGGT----------------------------------------
T ss_pred             --cccEEEE---EE--CCCEEEEEcCCCEEE--EEECCCC----------------------------------------
Confidence              9999999   77  677888888888888  7776652                                        


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC--------CCEEEEEcCC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIVSTGAD  374 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~l~~~~~d  374 (537)
                         +.     ...+..|...|.+++|  +++++++++.|+.|++||+. ..+.+..+..|..        +..+++++.|
T Consensus       270 ---~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  338 (445)
T 2ovr_B          270 ---TC-----LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE-TGNCIHTLTGHQSLTSGMELKDNILVSGNAD  338 (445)
T ss_dssp             ---EE-----EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT-TCCEEEEECCCCSCEEEEEEETTEEEEEETT
T ss_pred             ---cE-----eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC-CCCEEEEEcCCcccEEEEEEeCCEEEEEeCC
Confidence               11     1223456777888888  67888888888899999888 5566666655543        6788888889


Q ss_pred             CcEEEEECCCCeeeeeecc---CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe-
Q psy10942        375 GLLKLWSIKTSTCVSTFDK---HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-  450 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-  450 (537)
                      |.|++||+++++.+..+..   |..                 .|.+++|+  +++|++|+.||.|++||+.+++.+..+ 
T Consensus       339 g~i~vwd~~~~~~~~~~~~~~~~~~-----------------~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~  399 (445)
T 2ovr_B          339 STVKIWDIKTGQCLQTLQGPNKHQS-----------------AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV  399 (445)
T ss_dssp             SCEEEEETTTCCEEEEECSTTSCSS-----------------CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEECCCCcEEEEEccCCCCCC-----------------CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence            9999999988888877765   443                 67777775  579999999999999999999998888 


Q ss_pred             ----ecCCcceEEEEEecCCCEEEEEeCCCc----EEEEECCC
Q psy10942        451 ----EGHDASVLRCHFINKGTQIVSTGADGL----LKLWSIKT  485 (537)
Q Consensus       451 ----~~~~~~v~~~~~s~~~~~l~s~~~dg~----v~vwd~~~  485 (537)
                          .+|.+.|.+++|+|++.+|++++.||+    |.+||++.
T Consensus       400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence                468889999999999999999999998    99999864

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-35  Score=278.97  Aligned_cols=301  Identities=13%  Similarity=0.150  Sum_probs=242.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|++++|+  +++++|++++.||.|++||+.+++.+..+. +...+..+  .+.|        ++.++++++.|+.|++
T Consensus        33 ~~v~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~l~s~~~dg~i~i  100 (369)
T 3zwl_B           33 RPLTQVKYN--KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSI--DVDC--------FTKYCVTGSADYSIKL  100 (369)
T ss_dssp             SCEEEEEEC--TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEE--EECT--------TSSEEEEEETTTEEEE
T ss_pred             ceEEEEEEc--CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEE--EEcC--------CCCEEEEEeCCCeEEE
Confidence            469999999  899999999999999999999999999887 56677777  5677        6689999999999999


Q ss_pred             eeccceehhhhcCCCcceEEEEEeccccEEEEEeCC-----ceEEEEecccccCcccccccccceeEEeecchhhhhhhh
Q psy10942         82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD-----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIA  156 (537)
Q Consensus        82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  156 (537)
                      ||+.+++.+..+.....|.+++|+|++++|++++.+     +.|++||+...           .....+..         
T Consensus       101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~-----------~~~~~~~~---------  160 (369)
T 3zwl_B          101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD-----------SATHELTK---------  160 (369)
T ss_dssp             EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC-----------TTTCCEEE---------
T ss_pred             EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC-----------ccceeecc---------
Confidence            999999999888888899999999999999999998     99999999872           21111110         


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCc
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                                  .....    +                                 ..+.     .|.....+.++   +|
T Consensus       161 ------------~~~~~----~---------------------------------~~~~-----~~~~~~~~~~~---~~  183 (369)
T 3zwl_B          161 ------------VSEEP----I---------------------------------HKII-----THEGLDAATVA---GW  183 (369)
T ss_dssp             ------------ECSSC----S---------------------------------EEEE-----CCTTCCCEEEE---EE
T ss_pred             ------------cccce----e---------------------------------eecc-----CCcCccceeEE---EE
Confidence                        00000    1                                 0012     34003389999   99


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      +|++++|++++.|+.|+  +|++...                                          ...     ...+
T Consensus       184 ~~~~~~l~~~~~dg~i~--i~d~~~~------------------------------------------~~~-----~~~~  214 (369)
T 3zwl_B          184 STKGKYIIAGHKDGKIS--KYDVSNN------------------------------------------YEY-----VDSI  214 (369)
T ss_dssp             CGGGCEEEEEETTSEEE--EEETTTT------------------------------------------TEE-----EEEE
T ss_pred             cCCCCEEEEEcCCCEEE--EEECCCC------------------------------------------cEe-----EEEE
Confidence            99999999888888888  7777651                                          111     2223


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942        317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  396 (537)
Q Consensus       317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  396 (537)
                      ..|...|.+++|+|++++|++++.|+.|++||+. ..+.+..+. +..                                
T Consensus       215 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~-~~~--------------------------------  260 (369)
T 3zwl_B          215 DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS-TLQVLKKYE-TDC--------------------------------  260 (369)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEE-CSS--------------------------------
T ss_pred             ecCCCceeEEEECCCCCEEEEecCCceEEEEECC-CCceeeeec-CCC--------------------------------
Confidence            4577889999999999999999999999999998 444444433 111                                


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC--------------cEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA--------------TIKLWCLTDYVCLKSLEGHDASVLRCHF  462 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~  462 (537)
                                       .+..++|+|+++++++++.++              .+++||+.+++.+..+.+|...|++++|
T Consensus       261 -----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~  323 (369)
T 3zwl_B          261 -----------------PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAI  323 (369)
T ss_dssp             -----------------CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred             -----------------CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEE
Confidence                             778899999999999999888              8999999999999999999999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      +|++++|++++.||.|++|+++++.....+
T Consensus       324 s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~  353 (369)
T 3zwl_B          324 SPQGTSYASGGEDGFIRLHHFEKSYFDFKY  353 (369)
T ss_dssp             CTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred             CCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence            999999999999999999999876544443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=3.9e-36  Score=289.85  Aligned_cols=335  Identities=17%  Similarity=0.146  Sum_probs=229.9

Q ss_pred             ccceEEeeeccceehhhhcCCC-cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEe-------
Q psy10942         75 EKSLLHYYETSAVKELYQHGLS-SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-------  145 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-------  145 (537)
                      .++.+++|+++.++....+..| +.|.+++|+| ++++||+++.||.|++||+.++           .....+       
T Consensus        21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-----------~~~~~~~~~~~~~   89 (408)
T 4a11_B           21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENS-----------SRQSYYTCKAVCS   89 (408)
T ss_dssp             HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCC-----------SSSSCEEECEEEE
T ss_pred             ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCC-----------cccceEecccccc
Confidence            3566899999988887777755 6999999999 9999999999999999999984           222222       


Q ss_pred             ------ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc
Q psy10942        146 ------VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE  218 (537)
Q Consensus       146 ------~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~  218 (537)
                            .+|...|.+++|+|.++..+++++.++.    |                 ++||+       .+++.. ..   
T Consensus        90 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~---  138 (408)
T 4a11_B           90 IGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT----L-----------------KVWDT-------NTLQTADVF---  138 (408)
T ss_dssp             ECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE----E-----------------EEEET-------TTTEEEEEE---
T ss_pred             ccccccccCCCcEEEEEEccCCCcEEEEEeCCCe----E-----------------EEeeC-------CCCccceec---
Confidence                  2588999999999557778888877777    9                 99999       777666 33   


Q ss_pred             cccCCCcCeEEEEeccCccc---CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        219 RLGRDELKTVTLLERGKTVK---EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~---~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                        .+  ...+.++   .++|   ++.++++++.|+.++  +|++..                                  
T Consensus       139 --~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~--~~d~~~----------------------------------  175 (408)
T 4a11_B          139 --NF--EETVYSH---HMSPVSTKHCLVAVGTRGPKVQ--LCDLKS----------------------------------  175 (408)
T ss_dssp             --EC--SSCEEEE---EECSSCSSCCEEEEEESSSSEE--EEESSS----------------------------------
T ss_pred             --cC--CCceeee---EeecCCCCCcEEEEEcCCCeEE--EEeCCC----------------------------------
Confidence              45  6778888   6665   344666666666666  555544                                  


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCC----------------------
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG----------------------  352 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~----------------------  352 (537)
                               ++.     ...+..|...|.+++|+|+++ +|++++.||.|++||++..                      
T Consensus       176 ---------~~~-----~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (408)
T 4a11_B          176 ---------GSC-----SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN  241 (408)
T ss_dssp             ---------SCC-----CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred             ---------cce-----eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccc
Confidence                     322     223456888899999999988 5889999999999998532                      


Q ss_pred             ---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942        353 ---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS  429 (537)
Q Consensus       353 ---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  429 (537)
                         ...+..+..++++.++++++.|+.|++||+.+++....+..+.....     ..       .+........+..+++
T Consensus       242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~  309 (408)
T 4a11_B          242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS-----KK-------GLKFTVSCGCSSEFVF  309 (408)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC-----SS-------CCCCEECCSSSSCEEE
T ss_pred             ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccc-----cc-------cceeEEecCCCceEEE
Confidence               23466777788899999999999999999998876655433221100     00       1111222233455667


Q ss_pred             EeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCc
Q psy10942        430 SSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHK  509 (537)
Q Consensus       430 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~  509 (537)
                      ++.++.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.+++.+.....+....          
T Consensus       310 ~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~----------  379 (408)
T 4a11_B          310 VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKS----------  379 (408)
T ss_dssp             EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred             EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEecc----------
Confidence            7788999999999999999999999999999999999999999999999999999988776554433222          


Q ss_pred             cccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942        510 GFGLPRQLCSR-NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       510 ~~~~~~~~~s~-~~~~l~s~~~dg~i~vW  537 (537)
                             .+.+ ....+.+.+.|+.+++|
T Consensus       380 -------~~~~~~~~~~~~~~~~~~~~~W  401 (408)
T 4a11_B          380 -------QLNPAFEDAWSSSDEEGGTSAW  401 (408)
T ss_dssp             -----------------------------
T ss_pred             -------ccccccceeecccCccCceeec
Confidence                   3333 33345567789999998

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-35  Score=274.15  Aligned_cols=277  Identities=18%  Similarity=0.229  Sum_probs=228.8

Q ss_pred             ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      +.+..+..| +.|.+++| |++++|++++.||.|++||+.+           .+....+..|...|.+++|+ +++..++
T Consensus         9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~   75 (313)
T 3odt_A            9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD-----------QWLGTVVYTGQGFLNSVCYD-SEKELLL   75 (313)
T ss_dssp             EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS-----------SEEEEEEEECSSCEEEEEEE-TTTTEEE
T ss_pred             HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC-----------CEEEEEeecCCccEEEEEEC-CCCCEEE
Confidence            455566655 69999999 9999999999999999999988           67888899999999999999 7888888


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---cc--ccccccccCCCcCeEEEEeccCcccCCC
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---QQ--KHNTERLGRDELKTVTLLERGKTVKEED  241 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~  241 (537)
                      +++.++.    +                 ++|++       ....   ..  +.     +|  ...|.++   +|  +++
T Consensus        76 ~~~~dg~----i-----------------~~~~~-------~~~~~~~~~~~~~-----~~--~~~i~~~---~~--~~~  115 (313)
T 3odt_A           76 FGGKDTM----I-----------------NGVPL-------FATSGEDPLYTLI-----GH--QGNVCSL---SF--QDG  115 (313)
T ss_dssp             EEETTSC----E-----------------EEEET-------TCCTTSCC-CEEC-----CC--SSCEEEE---EE--ETT
T ss_pred             EecCCCe----E-----------------EEEEe-------eecCCCCcccchh-----hc--ccCEEEE---Ee--cCC
Confidence            8887776    8                 88887       3332   22  55     88  8999999   77  566


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      ++++++.|+.++  +|+..                                             ..     ...+..|..
T Consensus       116 ~l~~~~~d~~i~--~~d~~---------------------------------------------~~-----~~~~~~~~~  143 (313)
T 3odt_A          116 VVISGSWDKTAK--VWKEG---------------------------------------------SL-----VYNLQAHNA  143 (313)
T ss_dssp             EEEEEETTSEEE--EEETT---------------------------------------------EE-----EEEEECCSS
T ss_pred             EEEEEeCCCCEE--EEcCC---------------------------------------------cE-----EEecccCCC
Confidence            777777777777  66611                                             11     222346788


Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942        322 DINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT  400 (537)
Q Consensus       322 ~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~  400 (537)
                      .+.+++|+| +++++++++.|+.|++||..   +....+...                               +..    
T Consensus       144 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------------------------------~~~----  185 (313)
T 3odt_A          144 SVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGI-------------------------------HND----  185 (313)
T ss_dssp             CEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSS-------------------------------CSS----
T ss_pred             ceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEecc-------------------------------Ccc----
Confidence            899999988 89999999999999999943   333333220                               111    


Q ss_pred             EEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        401 LAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                                   .+.+++|+|++. +++++.||.|++||+.+++++..+.+|...|++++|+|++ .|++++.||.|++
T Consensus       186 -------------~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~i  250 (313)
T 3odt_A          186 -------------VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRI  250 (313)
T ss_dssp             -------------CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEE
T ss_pred             -------------cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEE
Confidence                         788899999988 8999999999999999999999999999999999999999 5899999999999


Q ss_pred             EECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        481 WSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       481 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ||+.+++++..+..|...+           .++   +|+|+++ +++++.||.|++|
T Consensus       251 wd~~~~~~~~~~~~~~~~i-----------~~~---~~~~~~~-~~~~~~dg~i~iw  292 (313)
T 3odt_A          251 WSKENGSLKQVITLPAISI-----------WSV---DCMSNGD-IIVGSSDNLVRIF  292 (313)
T ss_dssp             ECTTTCCEEEEEECSSSCE-----------EEE---EECTTSC-EEEEETTSCEEEE
T ss_pred             EECCCCceeEEEeccCceE-----------EEE---EEccCCC-EEEEeCCCcEEEE
Confidence            9999999999999999999           999   9999998 5678999999998

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.4e-36  Score=286.80  Aligned_cols=311  Identities=12%  Similarity=0.053  Sum_probs=239.7

Q ss_pred             EcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC---CCcceEEEEEec-
Q psy10942         32 DLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG---LSSPLVRIVRSS-  106 (537)
Q Consensus        32 d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~---~~~~v~~~~~s~-  106 (537)
                      ++++.+....+. +...+.++  .+.|.       +..++++++.|+.|++||+.+++....+.   +.+.|.+++|+| 
T Consensus        59 ~~~~~~~~~~~~~h~~~v~~~--~~~~~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~  129 (383)
T 3ei3_B           59 SLKSYKLHRTASPFDRRVTSL--EWHPT-------HPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF  129 (383)
T ss_dssp             HHTTCEEEEEECCCSSCEEEE--EECSS-------CTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT
T ss_pred             cccccceEEeccCCCCCEEEE--EECCC-------CCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC
Confidence            334445555444 45666777  56773       33799999999999999999887766655   447999999999 


Q ss_pred             cccEEEEEeCCceEEEEecccccCcccccccccceeEEeec---chhhhhhhhcccCCCccEEEeeeccccCCcccceee
Q psy10942        107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG---FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVK  183 (537)
Q Consensus       107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~  183 (537)
                      ++++|++++.|+.|++||+.+            .....+..   |...|.+++|+ +++..+++++.++.    |     
T Consensus       130 ~~~~l~s~~~d~~i~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----i-----  187 (383)
T 3ei3_B          130 NTNQLFVSSIRGATTLRDFSG------------SVIQVFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGR----L-----  187 (383)
T ss_dssp             EEEEEEEEETTTEEEEEETTS------------CEEEEEECCCCSSCCEEEEEEE-TTTTEEEEEETTSE----E-----
T ss_pred             CCCEEEEEeCCCEEEEEECCC------------CceEEEeccCCCCCCeEEEEEC-CCCCEEEEECCCCC----E-----
Confidence            789999999999999999986            23334443   44779999999 78888888887777    9     


Q ss_pred             cccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccC
Q psy10942        184 LGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKT  261 (537)
Q Consensus       184 ~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~  261 (537)
                                  ++||+       ...... +.     +|  ...|.++   +|+|+++ ++++++.|+.|+  +|++..
T Consensus       188 ------------~i~d~-------~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~~l~s~~~d~~i~--iwd~~~  236 (383)
T 3ei3_B          188 ------------LLLGL-------DGHEIFKEK-----LH--KAKVTHA---EFNPRCDWLMATSSVDATVK--LWDLRN  236 (383)
T ss_dssp             ------------EEEET-------TSCEEEEEE-----CS--SSCEEEE---EECSSCTTEEEEEETTSEEE--EEEGGG
T ss_pred             ------------EEEEC-------CCCEEEEec-----cC--CCcEEEE---EECCCCCCEEEEEeCCCEEE--EEeCCC
Confidence                        99998       544333 67     89  9999999   9999998 899999999999  998876


Q ss_pred             CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeC
Q psy10942        262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSL  340 (537)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~  340 (537)
                      ....                                       ...     ... ..|...|.+++|+| ++++|++++.
T Consensus       237 ~~~~---------------------------------------~~~-----~~~-~~~~~~v~~~~~s~~~~~~l~~~~~  271 (383)
T 3ei3_B          237 IKDK---------------------------------------NSY-----IAE-MPHEKPVNAAYFNPTDSTKLLTTDQ  271 (383)
T ss_dssp             CCST---------------------------------------TCE-----EEE-EECSSCEEEEEECTTTSCEEEEEES
T ss_pred             CCcc---------------------------------------cce-----EEE-ecCCCceEEEEEcCCCCCEEEEEcC
Confidence            3210                                       111     111 14778899999999 9999999999


Q ss_pred             CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE
Q psy10942        341 DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF  420 (537)
Q Consensus       341 d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~  420 (537)
                      |+.|++||+. .......+..|...                         ...+...+. ..++|++      .+..++|
T Consensus       272 d~~i~iwd~~-~~~~~~~~~~~~~~-------------------------~~~~~~~~~-~~~~p~~------~~~~~~~  318 (383)
T 3ei3_B          272 RNEIRVYSSY-DWSKPDQIIIHPHR-------------------------QFQHLTPIK-ATWHPMY------DLIVAGR  318 (383)
T ss_dssp             SSEEEEEETT-BTTSCSEEEECCBC-------------------------CCTTSCCCC-CEECSSS------SEEEEEC
T ss_pred             CCcEEEEECC-CCcccccccccccc-------------------------ccccccceE-EeccCCC------CceEEEe
Confidence            9999999998 44444555544320                         111223333 3566666      5666889


Q ss_pred             cCCCCEEEEEeCCCcEEEEECCCceeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      +|++++  +++.|+.|++||+.+++.+..+.+  |...+..++|+|++++|++++ |+.|++||+++
T Consensus       319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            999988  888999999999999999999987  456778889999999999997 99999999864

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=9.8e-36  Score=287.56  Aligned_cols=282  Identities=15%  Similarity=0.191  Sum_probs=219.0

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCC--C-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGL--S-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~--~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      ++|++|. |+.|++||..+|+.+..+..  + +.|++++|+|+|++||+|+.|+.|++||+.+           ++.++.
T Consensus       117 n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~-----------~~~~~~  184 (420)
T 4gga_A          117 NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-----------QKRLRN  184 (420)
T ss_dssp             SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------TEEEEE
T ss_pred             CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC-----------CcEEEE
Confidence            3666654 99999999999988766543  2 5799999999999999999999999999999           788999


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---cccccccc
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLG  221 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~  221 (537)
                      +.+|...+.+++++   +..+++++.++.    +                 ++||.       ......   +.     +
T Consensus       185 ~~~h~~~v~~~s~~---~~~l~sgs~d~~----i-----------------~~~d~-------~~~~~~~~~~~-----~  228 (420)
T 4gga_A          185 MTSHSARVGSLSWN---SYILSSGSRSGH----I-----------------HHHDV-------RVAEHHVATLS-----G  228 (420)
T ss_dssp             ECCCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----C
T ss_pred             EeCCCCceEEEeeC---CCEEEEEeCCCc----e-----------------eEeee-------cccceeeEEec-----c
Confidence            99999999988776   567777777766    8                 88887       544333   56     8


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                      |  ...+..+   .++|+++++++++.|+.++  +|+...+......                                 
T Consensus       229 h--~~~~~~~---~~~~~g~~l~s~~~D~~v~--i~~~~~~~~~~~~---------------------------------  268 (420)
T 4gga_A          229 H--SQEVCGL---RWAPDGRHLASGGNDNLVN--VWPSAPGEGGWVP---------------------------------  268 (420)
T ss_dssp             C--SSCEEEE---EECTTSSEEEEEETTSCEE--EEESSCCSSCSCC---------------------------------
T ss_pred             c--ccceeee---eecCCCCeeeeeeccccce--EEeecccccccee---------------------------------
Confidence            9  9999999   9999999999999999999  9988763211000                                 


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEE--eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASG--SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  378 (537)
                                 ......|...|.+++|+|++. +++++  +.|+.|++||+. .......+.                  
T Consensus       269 -----------~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~-t~~~~~~~~------------------  318 (420)
T 4gga_A          269 -----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSAVD------------------  318 (420)
T ss_dssp             -----------SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT-TTEEEEEEE------------------
T ss_pred             -----------eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC-ccccceeec------------------
Confidence                       223356788999999999654 44443  357777777776 444443333                  


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcc
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDAS  456 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~  456 (537)
                                    .+.                  .+.++.|+|+++.+++++  .|+.|++||+.+++++.++.+|.+.
T Consensus       319 --------------~~~------------------~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~  366 (420)
T 4gga_A          319 --------------AHS------------------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR  366 (420)
T ss_dssp             --------------CSS------------------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred             --------------ccc------------------ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence                          222                  677888999999888765  6899999999999999999999999


Q ss_pred             eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       457 v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      |++++|+|+|++|+||+.|++|+|||+.+..+....+.+....
T Consensus       367 V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~  409 (420)
T 4gga_A          367 VLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASA  409 (420)
T ss_dssp             EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred             EEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence            9999999999999999999999999998776666555554433

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.5e-37  Score=291.17  Aligned_cols=257  Identities=16%  Similarity=0.132  Sum_probs=195.7

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc--ceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL--KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.|.+++|+|++++||+++.|+.|++||+.+           .  +....+.+|...|.+++|+ +++++|++++.++. 
T Consensus        12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~-----------~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~d~~-   78 (377)
T 3dwl_C           12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDG-----------NGWKHARTFSDHDKIVTCVDWA-PKSNRIVTCSQDRN-   78 (377)
T ss_dssp             SCCSCCEECSSSSEEECCCSSSCBCEEEEET-----------TEEEECCCBCCCSSCEEEEEEC-TTTCCEEEEETTSS-
T ss_pred             CcEEEEEECCCCCEEEEecCCCEEEEEEccC-----------CceEEEEEEecCCceEEEEEEe-CCCCEEEEEeCCCe-
Confidence            5799999999999999999999999999998           4  6778889999999999999 77889988887777 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---cc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---QQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                         |                 ++||+       .++.   ..  +.     +|  ...|.++   +|+|++++|++++.|
T Consensus        79 ---v-----------------~vwd~-------~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~d  121 (377)
T 3dwl_C           79 ---A-----------------YVYEK-------RPDGTWKQTLVLL-----RL--NRAATFV---RWSPNEDKFAVGSGA  121 (377)
T ss_dssp             ---E-----------------EEC-------------CCCCEEECC-----CC--SSCEEEE---ECCTTSSCCEEEESS
T ss_pred             ---E-----------------EEEEc-------CCCCceeeeeEec-----cc--CCceEEE---EECCCCCEEEEEecC
Confidence               9                 99999       6655   22  55     89  9999999   999999999999999


Q ss_pred             CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc-cCCCeEEEEE
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG-HEKDINCVTV  328 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~  328 (537)
                      +.++  +|++......                                   .     .     ...+.. |...|.+++|
T Consensus       122 ~~i~--iwd~~~~~~~-----------------------------------~-----~-----~~~~~~~h~~~v~~~~~  154 (377)
T 3dwl_C          122 RVIS--VCYFEQENDW-----------------------------------W-----V-----SKHLKRPLRSTILSLDW  154 (377)
T ss_dssp             SCEE--ECCC-----C-----------------------------------C-----C-----CEEECSSCCSCEEEEEE
T ss_pred             CeEE--EEEECCcccc-----------------------------------e-----e-----eeEeecccCCCeEEEEE
Confidence            9999  9998773100                                   0     0     112233 8889999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      +|++++|++++.|+.|++||+... ...........+.              .+..++++..+ .|..            
T Consensus       155 ~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~~------------  206 (377)
T 3dwl_C          155 HPNNVLLAAGCADRKAYVLSAYVR-DVDAKPEASVWGS--------------RLPFNTVCAEY-PSGG------------  206 (377)
T ss_dssp             CTTSSEEEEEESSSCEEEEEECCS-SCC-CCCSCSSCS--------------CCCEEEEEECC-CCSS------------
T ss_pred             cCCCCEEEEEeCCCEEEEEEEEec-ccCCCcccccccc--------------ccchhhhhhcc-cCCc------------
Confidence            999999999999999999999622 1110000000000              00122333344 4443            


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                           .+.+++|+|++++|++++.||.|++||+.+++.    +..+.+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus       207 -----~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          207 -----WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             -----SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             -----eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence                 788899999999999999999999999999877    88899999999999999999999998766655 77654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.8e-34  Score=277.18  Aligned_cols=314  Identities=13%  Similarity=0.148  Sum_probs=233.3

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccc------eeeeec-cccccceeeeEeecCccccccCC----c---E
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK------QLRSYP-AYESLETCAVFHLSDETESKSGG----K---T   68 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~---~   68 (537)
                      ..|+|++|+  +  ++|++++.||.|++||+++++      .+..+. +..++..+  .+.|        +    +   .
T Consensus        17 ~~i~~~~~~--~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~~g~~~~   82 (397)
T 1sq9_A           17 ADIFSVSAC--N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV--DVLQ--------AIERDAFELC   82 (397)
T ss_dssp             SCEEEEEEC--S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEE--EEEE--------EEETTTEEEE
T ss_pred             cCeEEEEec--C--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEE--EEec--------ccccCCcccc
Confidence            479999999  5  799999999999999999988      555554 56677777  5566        5    7   8


Q ss_pred             EEEEeCccceEEeeeccceeh-----hhhcCCC------cceEEEEEe----ccccE-EEEEeCCceEEEEecccccCcc
Q psy10942         69 FVLAGGEKSLLHYYETSAVKE-----LYQHGLS------SPLVRIVRS----SVKRM-YAVVTADHNISLYRLNSETGLE  132 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~-----~~~~~~~------~~v~~~~~s----~~~~~-la~~~~d~~i~iwd~~~~~~~~  132 (537)
                      ++++++.|+.|++||+.+++.     +..+..+      +.|.+++|+    |++++ |++++.|+.|++||+.+.    
T Consensus        83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----  158 (397)
T 1sq9_A           83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF----  158 (397)
T ss_dssp             EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS----
T ss_pred             EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc----
Confidence            999999999999999999887     7777766      799999999    99999 999999999999999871    


Q ss_pred             cccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc
Q psy10942        133 ERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ  212 (537)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~  212 (537)
                             ..       ...-..+.|.| ... + .+.        +                                 .
T Consensus       159 -------~~-------~~~~~~~~~~~-~~~-~-~~~--------~---------------------------------~  180 (397)
T 1sq9_A          159 -------AD-------ESNSLTLNWSP-TLE-L-QGT--------V---------------------------------E  180 (397)
T ss_dssp             -------SS-------HHHHTTTCCCC-EEE-E-EEE--------E---------------------------------C
T ss_pred             -------cc-------ccccceeeccC-cce-e-eee--------e---------------------------------c
Confidence                   11       01112222431 111 1 000        0                                 0


Q ss_pred             cccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe
Q psy10942        213 QKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS  292 (537)
Q Consensus       213 ~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~  292 (537)
                      ...     .|  ...|.++   +|+|++ ++++++.|+.++  +|++....                             
T Consensus       181 ~~~-----~~--~~~i~~~---~~~~~~-~l~~~~~dg~i~--i~d~~~~~-----------------------------  218 (397)
T 1sq9_A          181 SPM-----TP--SQFATSV---DISERG-LIATGFNNGTVQ--ISELSTLR-----------------------------  218 (397)
T ss_dssp             CSS-----SS--CCCCCEE---EECTTS-EEEEECTTSEEE--EEETTTTE-----------------------------
T ss_pred             ccc-----CC--CCCceEE---EECCCc-eEEEEeCCCcEE--EEECCCCc-----------------------------
Confidence            012     57  8889999   999999 999999999888  88887621                             


Q ss_pred             CCCeEEEEECCCCceeeeeeccccccc---CCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCceeeEEEEecCCCC
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGH---EKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGT  366 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~  366 (537)
                         .+..+..             ...|   ...|.+++|+|++++|++++.|   +.|++||+. ..+.+..+.......
T Consensus       219 ---~~~~~~~-------------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~-~~~~~~~~~~~~~~~  281 (397)
T 1sq9_A          219 ---PLYNFES-------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE-FGERIGSLSVPTHSS  281 (397)
T ss_dssp             ---EEEEEEC-------------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT-TCCEEEEECBC----
T ss_pred             ---eeEEEec-------------cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC-CCcccceeccCcccc
Confidence               0111110             0126   7889999999999999999999   999999998 555555554311100


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC  446 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~  446 (537)
                      .                   .......|..                 .+.+++|+|++++|++++.||.|++||+.+++.
T Consensus       282 ~-------------------~~~~~~~~~~-----------------~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  325 (397)
T 1sq9_A          282 Q-------------------ASLGEFAHSS-----------------WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER  325 (397)
T ss_dssp             -----------------------CCBSBSS-----------------CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred             c-------------------ccccccccCC-----------------cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence            0                   0000001222                 788999999999999999999999999999999


Q ss_pred             eeEee------cC---------------CcceEEEEEecCC----------CEEEEEeCCCcEEEEECCCCe
Q psy10942        447 LKSLE------GH---------------DASVLRCHFINKG----------TQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       447 ~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      +..+.      +|               ...|++++|+|++          ++|++++.||.|++|++++|+
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            99999      88               9999999999998          799999999999999998764

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=4.5e-35  Score=277.09  Aligned_cols=287  Identities=11%  Similarity=0.135  Sum_probs=222.8

Q ss_pred             CCcceEEEEEeccccEE-EEEeC---CceEEEEecccccCcccccccccceeE-EeecchhhhhhhhcccCC--CccEEE
Q psy10942         95 LSSPLVRIVRSSVKRMY-AVVTA---DHNISLYRLNSETGLEERPNKILKFRK-QFVGFSDEILDIALLGEE--DSHIVV  167 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~l-a~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~~l~~  167 (537)
                      +.+.|.+++|+|++..+ ++++.   |+.|++||+.+           .+... ...+|...|.+++|+|..  +..+++
T Consensus        17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~   85 (357)
T 3i2n_A           17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH-----------GDLKLLREIEKAKPIKCGTFGATSLQQRYLAT   85 (357)
T ss_dssp             CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS-----------SSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred             CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC-----------CcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence            44689999999999655 55555   89999999998           34333 334788899999999532  688888


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc--ccccccccCCCcCeEEEEecc---CcccCCC
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ--KHNTERLGRDELKTVTLLERG---KTVKEED  241 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~--l~~~~~~~h~~~~~v~~~~~~---~~s~~~~  241 (537)
                      ++.++.    |                 ++||+       .+.+ ..  +.     +|  ...|.++.+.   +|+|+++
T Consensus        86 ~~~dg~----i-----------------~iwd~-------~~~~~~~~~~~-----~~--~~~v~~~~~~~~~~~s~~~~  130 (357)
T 3i2n_A           86 GDFGGN----L-----------------HIWNL-------EAPEMPVYSVK-----GH--KEIINAIDGIGGLGIGEGAP  130 (357)
T ss_dssp             EETTSC----E-----------------EEECT-------TSCSSCSEEEC-----CC--SSCEEEEEEESGGGCC-CCC
T ss_pred             ecCCCe----E-----------------EEEeC-------CCCCccEEEEE-----ec--ccceEEEeeccccccCCCcc
Confidence            887777    9                 99999       7666 33  66     89  9999999432   3578888


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      +|++++.|+.++  +|++......                               +..+...            ...+..
T Consensus       131 ~l~~~~~d~~i~--vwd~~~~~~~-------------------------------~~~~~~~------------~~~~~~  165 (357)
T 3i2n_A          131 EIVTGSRDGTVK--VWDPRQKDDP-------------------------------VANMEPV------------QGENKR  165 (357)
T ss_dssp             EEEEEETTSCEE--EECTTSCSSC-------------------------------SEEECCC------------TTSCCC
T ss_pred             EEEEEeCCCeEE--EEeCCCCCCc-------------------------------ceecccc------------CCCCCC
Confidence            899888888888  8888763210                               1111111            111234


Q ss_pred             CeEEEE----EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        322 DINCVT----VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       322 ~v~~~~----~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      .+.+++    |+|++++|++++.|+.|++||++ ..+... ...+..                                 
T Consensus       166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~-~~~~~~---------------------------------  210 (357)
T 3i2n_A          166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR-NMALRW-ETNIKN---------------------------------  210 (357)
T ss_dssp             CEEEEEEECCCC-CCCEEEEEETTSEEEEEETT-TTEEEE-EEECSS---------------------------------
T ss_pred             ceEEEEEEeccCCCCCEEEEEccCCeEEEEECc-cCceee-ecCCCC---------------------------------
Confidence            678887    78899999999999999999998 433322 122222                                 


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcC---CCCEEEEEeCCCcEEEEECCCceeeeEee-----cCCcceEEEEEecCCC-E
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSP---LDRILISSSGDATIKLWCLTDYVCLKSLE-----GHDASVLRCHFINKGT-Q  468 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~s~~~~-~  468 (537)
                                      .+.+++|+|   ++++|++++.||.|++||+.+++....+.     +|...|++++|+|+++ +
T Consensus       211 ----------------~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  274 (357)
T 3i2n_A          211 ----------------GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNREL  274 (357)
T ss_dssp             ----------------CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred             ----------------ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcE
Confidence                            788899999   89999999999999999999877666555     8999999999999998 8


Q ss_pred             EEEEeCCCcEEEEECCCC-------------------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE-EE
Q psy10942        469 IVSTGADGLLKLWSIKTS-------------------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY-RG  528 (537)
Q Consensus       469 l~s~~~dg~v~vwd~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~-s~  528 (537)
                      |++++.||.|++||++++                   +.+..+.+|...|           .++   +|+|++++|+ ++
T Consensus       275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~~s~  340 (357)
T 3i2n_A          275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI-----------SSL---DWSPDKRGLCVCS  340 (357)
T ss_dssp             EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE-----------EEE---EECSSSTTEEEEE
T ss_pred             EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe-----------eEE---EEcCCCCeEEEEe
Confidence            999999999999998754                   4677888999999           999   9999999998 89


Q ss_pred             eCCCCEEeC
Q psy10942        529 GWSPQVVVY  537 (537)
Q Consensus       529 ~~dg~i~vW  537 (537)
                      +.||.|+||
T Consensus       341 ~~d~~i~iw  349 (357)
T 3i2n_A          341 SFDQTVRVL  349 (357)
T ss_dssp             ETTSEEEEE
T ss_pred             cCCCcEEEE
Confidence            999999998

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-36  Score=296.46  Aligned_cols=311  Identities=11%  Similarity=0.084  Sum_probs=234.9

Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGL  181 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~  181 (537)
                      .|+|+++.+++++      .|+..            ++++..+ .+|.+.|.+++|+|.++.+|++++.++.    |   
T Consensus        34 ~f~~~~~~~~~~~------~w~~~------------g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~----v---   88 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGNLR------------GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGV----I---   88 (437)
T ss_dssp             GGCCCCCCCCCCC------GGGCC------------CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSE----E---
T ss_pred             hcCCccccccccc------ccccc------------ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCce----E---
Confidence            3688888887655      37744            4677778 8899999999999328889988887777    9   


Q ss_pred             eecccCCCcchhhHHHHHHHHHhhhccc---ccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccc
Q psy10942        182 VKLGANRSHNEWFDKTFERILEAKFKQS---SSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEK  258 (537)
Q Consensus       182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~---~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~  258 (537)
                                    ++||+       .+   .... ......+|  ...|.++   +|+|++++|++++.|+.|+  +|+
T Consensus        89 --------------~vwd~-------~~~~~~~~~-~~~~~~~h--~~~v~~~---~~~~~~~~l~s~s~dg~i~--vwd  139 (437)
T 3gre_A           89 --------------KIWNL-------KEIIVGEVY-SSSLTYDC--SSTVTQI---TMIPNFDAFAVSSKDGQII--VLK  139 (437)
T ss_dssp             --------------EEEEH-------HHHHTTCCC-SCSEEEEC--SSCEEEE---EECTTSSEEEEEETTSEEE--EEE
T ss_pred             --------------EEeEC-------cccccCccc-ceeeeccC--CCCEEEE---EEeCCCCEEEEEeCCCEEE--EEE
Confidence                          99998       43   2211 00011168  9999999   9999999999999999999  999


Q ss_pred             cc---CCCcccccccccccceeeeee--------------CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc--c
Q psy10942        259 RK---TYHFPLFGIFVPEAEHGAFYT--------------GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--H  319 (537)
Q Consensus       259 ~~---~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~  319 (537)
                      +.   .+...... ....+..+..+.              ...-..+++++.|+.|++||+.+++....     +..  |
T Consensus       140 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-----~~~~~h  213 (437)
T 3gre_A          140 VNHYQQESEVKFL-NCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI-----IENSPR  213 (437)
T ss_dssp             EEEEEETTEEEEE-EEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE-----EECCGG
T ss_pred             eccccCCceeecc-ccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE-----EccCCC
Confidence            95   22111000 000111222111              01126899999999999999999876433     344  8


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      ...|++++|+|++++|++++.||.|++||++ ..+.+..+..                               .+..   
T Consensus       214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-------------------------------~~~~---  258 (437)
T 3gre_A          214 HGAVSSICIDEECCVLILGTTRGIIDIWDIR-FNVLIRSWSF-------------------------------GDHA---  258 (437)
T ss_dssp             GCCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEEBC-------------------------------TTCE---
T ss_pred             CCceEEEEECCCCCEEEEEcCCCeEEEEEcC-CccEEEEEec-------------------------------CCCC---
Confidence            8999999999999999999999999999998 4554444331                               1222   


Q ss_pred             EEEEecCCCceEEeeeeEEE----EcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-----------------------
Q psy10942        400 TLAITKDENQIITGGVWFVN----FSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-----------------------  452 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~----~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----------------------  452 (537)
                                    .|.+++    |+|++++|++++.||.|++||+.+++.+..+.+                       
T Consensus       259 --------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  324 (437)
T 3gre_A          259 --------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC  324 (437)
T ss_dssp             --------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred             --------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence                          556664    445788999999999999999999988877764                       


Q ss_pred             ---CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC-----------------------------------
Q psy10942        453 ---HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-----------------------------------  494 (537)
Q Consensus       453 ---~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-----------------------------------  494 (537)
                         |...|++++|+ ++++|++++.|+.|++||+.+++....+.+                                   
T Consensus       325 ~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (437)
T 3gre_A          325 GIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS  403 (437)
T ss_dssp             CCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred             ccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence               44568889999 778999999999999999999988887776                                   


Q ss_pred             --CccceeccCCCCCCccccccceeeecC--CCEEEEEeCCCCEEeC
Q psy10942        495 --HALKIRNSDSENDHKGFGLPRQLCSRN--SDCEYRGGWSPQVVVY  537 (537)
Q Consensus       495 --~~~~i~~~~~~~~~~~~~~~~~~~s~~--~~~l~s~~~dg~i~vW  537 (537)
                        |...|           .++   +|+++  +.+|++++.||.|+||
T Consensus       404 ~~h~~~I-----------~~i---~~~~~~~~~~l~s~~~dG~I~iw  436 (437)
T 3gre_A          404 LYHHDII-----------NSI---STCEVDETPLLVACDNSGLIGIF  436 (437)
T ss_dssp             ---CCCE-----------EEE---EEEESSSSEEEEEEETTSCEEEE
T ss_pred             cccccce-----------eeE---eeeccCCceEEEEEcCCceEEEe
Confidence              45555           777   99998  8899999999999998

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2.1e-35  Score=278.70  Aligned_cols=299  Identities=12%  Similarity=0.096  Sum_probs=203.5

Q ss_pred             CceeeeeeeeeccCCcceEEEecC-------cceEEEEEcCccceee----------eec-cccccceeeeEeecCcc-c
Q psy10942          1 VKFCVTCFDVIPQITSEFSVHCGR-------DKVLFTWDLSSRKQLR----------SYP-AYESLETCAVFHLSDET-E   61 (537)
Q Consensus         1 ~~~~V~~~~~~~~~~~~~l~s~~~-------~g~v~iwd~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~-~   61 (537)
                      +.++|.|++|+  ||+++|++||.       ++.|++|++..+....          .+. +...+.++++  .+... .
T Consensus        13 ~g~PV~sv~fs--~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~   88 (365)
T 4h5i_A           13 VGYPAYGAKFL--NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILV   88 (365)
T ss_dssp             CSSCEEEEEEE--ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEE
T ss_pred             CCCCEEEEEEe--CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEE
Confidence            35789999999  89999999864       3369999987654321          111 1222333311  11000 0


Q ss_pred             cccCCcEEEEEeCccceEEeeeccceehh----hhc------CCCcceEEEEEeccccEEEEEe--CCceEEEEeccccc
Q psy10942         62 SKSGGKTFVLAGGEKSLLHYYETSAVKEL----YQH------GLSSPLVRIVRSSVKRMYAVVT--ADHNISLYRLNSET  129 (537)
Q Consensus        62 ~~~~~~~~~~~~~~~~~i~~wd~~~~~~~----~~~------~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~  129 (537)
                      ..+.+...+++++.++.+++|++.+....    ...      .....+.+++|||||++||+++  .|++|+|||+.+  
T Consensus        89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--  166 (365)
T 4h5i_A           89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--  166 (365)
T ss_dssp             ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--
T ss_pred             EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--
Confidence            00001222333456788999998754321    111      1124689999999999987665  689999999998  


Q ss_pred             CcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc
Q psy10942        130 GLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS  209 (537)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~  209 (537)
                               .+.+..+. |...|.+++|+ |+++++++++.+.     +                 .+|+.       .+
T Consensus       167 ---------~~~~~~~~-~~~~V~~v~fs-pdg~~l~s~s~~~-----~-----------------~~~~~-------~~  206 (365)
T 4h5i_A          167 ---------LTEKFEIE-TRGEVKDLHFS-TDGKVVAYITGSS-----L-----------------EVIST-------VT  206 (365)
T ss_dssp             ---------TEEEEEEE-CSSCCCEEEEC-TTSSEEEEECSSC-----E-----------------EEEET-------TT
T ss_pred             ---------CcEEEEeC-CCCceEEEEEc-cCCceEEecccee-----E-----------------EEEEe-------cc
Confidence                     67777775 66779999999 7888888877544     4                 55655       44


Q ss_pred             ccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEE
Q psy10942        210 SSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLA  289 (537)
Q Consensus       210 ~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~  289 (537)
                      +..... ....+|  ...|.++   +|+|+++++++++.|+...                                    
T Consensus       207 ~~~~~~-~~~~~~--~~~v~~v---~fspdg~~l~~~s~d~~~~------------------------------------  244 (365)
T 4h5i_A          207 GSCIAR-KTDFDK--NWSLSKI---NFIADDTVLIAASLKKGKG------------------------------------  244 (365)
T ss_dssp             CCEEEE-ECCCCT--TEEEEEE---EEEETTEEEEEEEESSSCC------------------------------------
T ss_pred             Ccceee-eecCCC--CCCEEEE---EEcCCCCEEEEEecCCcce------------------------------------
Confidence            443310 111278  8899999   9999999999988776422                                    


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-EecCCCCEE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-RGHKKGTQI  368 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~l  368 (537)
                           ..++.|+.......... ...+.+|...|++++|+|||++|++|+.|++|+|||+. ..+++..+ .+|..    
T Consensus       245 -----~~i~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~-~~~~~~~~~~gH~~----  313 (365)
T 4h5i_A          245 -----IVLTKISIKSGNTSVLR-SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK-DLSMSKIFKQAHSF----  313 (365)
T ss_dssp             -----EEEEEEEEETTEEEEEE-EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEETTSSSS----
T ss_pred             -----eEEeecccccceeccee-eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC-CCcEEEEecCcccC----
Confidence                 01233333332221111 23456788899999999999999999999999999998 55555443 34443    


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                                                                   .|++++|+|||++||+|+.|++|+|||++.
T Consensus       314 ---------------------------------------------~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          314 ---------------------------------------------AITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             ---------------------------------------------CEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             ---------------------------------------------CEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence                                                         899999999999999999999999999964

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.5e-35  Score=287.50  Aligned_cols=285  Identities=13%  Similarity=0.093  Sum_probs=217.3

Q ss_pred             cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ..|++++|+| ++++||+|+.||.|+|||+.++.         ......+.+|.+.|.+++|+|.++++|++++.++.  
T Consensus       120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~---------~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~--  188 (435)
T 4e54_B          120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD---------KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT--  188 (435)
T ss_dssp             SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS---------CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC--
T ss_pred             CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC---------ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE--
Confidence            4799999999 56789999999999999998731         23344567899999999999667888888888777  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                        |                 ++||+       ++.... +.  ....+  ...+.++   +|+|++++|++|+.||.|+ 
T Consensus       189 --v-----------------~iwd~-------~~~~~~~~~--~~~~~--~~~~~~~---~~~~~~~~l~~g~~dg~i~-  234 (435)
T 4e54_B          189 --T-----------------RLQDF-------KGNILRVFA--SSDTI--NIWFCSL---DVSASSRMVVTGDNVGNVI-  234 (435)
T ss_dssp             --E-----------------EEEET-------TSCEEEEEE--CCSSC--SCCCCCE---EEETTTTEEEEECSSSBEE-
T ss_pred             --E-----------------EEeec-------cCCceeEEe--ccCCC--CccEEEE---EECCCCCEEEEEeCCCcEe-
Confidence              9                 99999       655444 22  00123  4567888   8999999998888888888 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-  333 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-  333 (537)
                       +|++...                                           .      ...+.+|...|.+++|+|++. 
T Consensus       235 -~wd~~~~-------------------------------------------~------~~~~~~h~~~v~~v~~~p~~~~  264 (435)
T 4e54_B          235 -LLNMDGK-------------------------------------------E------LWNLRMHKKKVTHVALNPCCDW  264 (435)
T ss_dssp             -EEESSSC-------------------------------------------B------CCCSBCCSSCEEEEEECTTCSS
T ss_pred             -eeccCcc-------------------------------------------e------eEEEecccceEEeeeecCCCce
Confidence             7776541                                           1      223457889999999999876 


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      +|++++.|+.|++||++.. +...                             .+.....|..                 
T Consensus       265 ~~~s~s~d~~v~iwd~~~~-~~~~-----------------------------~~~~~~~h~~-----------------  297 (435)
T 4e54_B          265 FLATASVDQTVKIWDLRQV-RGKA-----------------------------SFLYSLPHRH-----------------  297 (435)
T ss_dssp             EEEEEETTSBCCEEETTTC-CSSS-----------------------------CCSBCCBCSS-----------------
T ss_pred             EEEEecCcceeeEEecccc-cccc-----------------------------eEEEeeeccc-----------------
Confidence            7888999999999998732 1110                             0111122333                 


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc------ceEEEEEecCCCEEEEEeC------------C
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA------SVLRCHFINKGTQIVSTGA------------D  475 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~~~------------d  475 (537)
                      .|.+++|+|++++|++++.||.|++||+.+++....+..|..      .+....|+|++.++++++.            +
T Consensus       298 ~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  377 (435)
T 4e54_B          298 PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYEL  377 (435)
T ss_dssp             CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCC
T ss_pred             cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCC
Confidence            788899999999999999999999999999888777766643      2345678888777777642            3


Q ss_pred             CcEEEEECCCCeeEEEec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        476 GLLKLWSIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +.|++||..+++.+..+. +|...|           .++  .+|+|+|++|++|+ |+.|+||
T Consensus       378 ~~i~iwd~~~g~~~~~l~~~~~~~v-----------~s~--~~fspdg~~lasg~-d~~i~iW  426 (435)
T 4e54_B          378 RTIDVFDGNSGKMMCQLYDPESSGI-----------SSL--NEFNPMGDTLASAM-GYHILIW  426 (435)
T ss_dssp             CCEEEECSSSCCEEEEECCSSCCCC-----------CCE--EEECTTSSCEEEEC-SSEEEEC
T ss_pred             CEEEEEECCCCcEEEEEeCCCCCcE-----------EEE--EEECCCCCEEEEEc-CCcEEEE
Confidence            579999999999988875 567777           655  15999999999876 8899999

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8.7e-36  Score=283.00  Aligned_cols=324  Identities=14%  Similarity=0.178  Sum_probs=238.9

Q ss_pred             eeeeeeeeecc--CCcceEEEecCcceEEEEEcCccceeeeec------cccccceeeeEeecCccccccCCcEEEEEeC
Q psy10942          3 FCVTCFDVIPQ--ITSEFSVHCGRDKVLFTWDLSSRKQLRSYP------AYESLETCAVFHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         3 ~~V~~~~~~~~--~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      ..|++++|+|.  .....+++++.++.|++||+.+++.+..+.      +.+.+..+  .+.|..    ..++.++++++
T Consensus        19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~----~~~~~~l~~~~   92 (366)
T 3k26_A           19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTC--AWTYDS----NTSHPLLAVAG   92 (366)
T ss_dssp             SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEE--EEEECT----TTCCEEEEEEE
T ss_pred             CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEE--EeccCC----CCCCCEEEEec
Confidence            47999999953  134556666667799999999988877665      23456666  556631    11268999999


Q ss_pred             ccceEEeeeccceehhhhcCC-CcceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEe---ecch
Q psy10942         75 EKSLLHYYETSAVKELYQHGL-SSPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF---VGFS  149 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~  149 (537)
                      .||.|++||+.+++.+..+.. .+.|.+++|+| ++++|++++.|+.|++||+.+           .+....+   .+|.
T Consensus        93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~~~~~~~~  161 (366)
T 3k26_A           93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-----------DTLVAIFGGVEGHR  161 (366)
T ss_dssp             TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-----------TEEEEEECSTTSCS
T ss_pred             CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-----------CeEEEEeccccccc
Confidence            999999999999998888874 47999999999 999999999999999999998           5667776   6788


Q ss_pred             hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCe
Q psy10942        150 DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKT  227 (537)
Q Consensus       150 ~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~  227 (537)
                      ..|.+++|+ +++..+++++.++.    |                 ++||+       .+.+..  +.     .      
T Consensus       162 ~~v~~~~~~-~~~~~l~~~~~dg~----i-----------------~i~d~-------~~~~~~~~~~-----~------  201 (366)
T 3k26_A          162 DEVLSADYD-LLGEKIMSCGMDHS----L-----------------KLWRI-------NSKRMMNAIK-----E------  201 (366)
T ss_dssp             SCEEEEEEC-TTSSEEEEEETTSC----E-----------------EEEES-------CSHHHHHHHH-----H------
T ss_pred             CceeEEEEC-CCCCEEEEecCCCC----E-----------------EEEEC-------CCCccccccc-----e------
Confidence            889999999 67778888777666    8                 88888       655544  22     1      


Q ss_pred             EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                        .+   .++|++..+..........                                                    . 
T Consensus       202 --~~---~~~~~~~~~~~~~~~~~~~----------------------------------------------------~-  223 (366)
T 3k26_A          202 --SY---DYNPNKTNRPFISQKIHFP----------------------------------------------------D-  223 (366)
T ss_dssp             --HH---TCCGGGCSSCCCCEEECCC----------------------------------------------------S-
T ss_pred             --eE---EecCCCCcccccceeeccC----------------------------------------------------c-
Confidence              23   6667665443322110000                                                    0 


Q ss_pred             eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                           ......|...|.+++|+  ++++++++.|+.|++||+.........+..+..                   ....
T Consensus       224 -----~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------------~~~~  277 (366)
T 3k26_A          224 -----FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSES-------------------NVTI  277 (366)
T ss_dssp             -----EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCC-------------------CEEE
T ss_pred             -----cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCc-------------------chhe
Confidence                 11224578889999998  779999999999999999843322211111110                   0122


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCcee----eeEeecC--CcceEE
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDYVC----LKSLEGH--DASVLR  459 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~--~~~v~~  459 (537)
                      +..+..|..                 .+.+++|+|+  +++|++++.||.|++||+.++++    ...+.+|  ...|++
T Consensus       278 ~~~~~~~~~-----------------~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~  340 (366)
T 3k26_A          278 LGRFDYSQC-----------------DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ  340 (366)
T ss_dssp             EEEEECSSC-----------------CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEE
T ss_pred             eccccccCC-----------------cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEE
Confidence            233333433                 6777888888  99999999999999999998753    4477777  789999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        460 CHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       460 ~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ++|+|++++|++++.||.|++||+.
T Consensus       341 ~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          341 TSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             EEeCCCCCeEEEEeCCCEEEEEEec
Confidence            9999999999999999999999985

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=4.6e-35  Score=301.31  Aligned_cols=285  Identities=18%  Similarity=0.242  Sum_probs=222.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----hhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----ELYQHGLS-SPLVRIVRSSVKRMYAVVTAD  117 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~~-~~v~~~~~s~~~~~la~~~~d  117 (537)
                      |...+.++  .+.|.       +..+|++++.|+.|++||+.+..     ....+..| ..|.+++|+|++++|++++.|
T Consensus       381 H~~~V~~v--~~~~~-------~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D  451 (694)
T 3dm0_A          381 HTDMVTAI--ATPID-------NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD  451 (694)
T ss_dssp             CSSCEEEE--ECCTT-------CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCceeEEE--EecCC-------CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence            56667777  55664       56799999999999999997643     23444444 689999999999999999999


Q ss_pred             ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942        118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT  197 (537)
Q Consensus       118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  197 (537)
                      ++|++||+.+           ....+.+.+|...|.+++|+ +++++|++++.++.    |                 ++
T Consensus       452 g~v~vwd~~~-----------~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~D~~----i-----------------~i  498 (694)
T 3dm0_A          452 GELRLWDLAA-----------GVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRT----I-----------------KL  498 (694)
T ss_dssp             SEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSC----E-----------------EE
T ss_pred             CcEEEEECCC-----------CcceeEEeCCCCCEEEEEEe-CCCCEEEEEeCCCE----E-----------------EE
Confidence            9999999998           67888999999999999999 78889998888877    9                 99


Q ss_pred             HHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC--CeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942        198 FERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE--DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       198 wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                      ||.       .............+|  ...|.++   +|+|++  ..+++++.|+.|+  +|++..              
T Consensus       499 wd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~~~l~s~s~d~~v~--vwd~~~--------------  550 (694)
T 3dm0_A          499 WNT-------LGECKYTISEGGEGH--RDWVSCV---RFSPNTLQPTIVSASWDKTVK--VWNLSN--------------  550 (694)
T ss_dssp             ECT-------TSCEEEEECSSTTSC--SSCEEEE---EECSCSSSCEEEEEETTSCEE--EEETTT--------------
T ss_pred             EEC-------CCCcceeeccCCCCC--CCcEEEE---EEeCCCCcceEEEEeCCCeEE--EEECCC--------------
Confidence            997       433222111112278  8999999   999986  4566666666666  665544              


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL  355 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  355 (537)
                                                   .+.     ...+.+|...|++++|+|++++|++++.|+.|++||+. ..+.
T Consensus       551 -----------------------------~~~-----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~-~~~~  595 (694)
T 3dm0_A          551 -----------------------------CKL-----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA-EGKK  595 (694)
T ss_dssp             -----------------------------CCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT-TTEE
T ss_pred             -----------------------------CcE-----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCce
Confidence                                         322     23346789999999999999999999999999999998 4333


Q ss_pred             eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942        356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT  435 (537)
Q Consensus       356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  435 (537)
                      +..+.                                .+.                  .+.+++|+|++.++++++ ++.
T Consensus       596 ~~~~~--------------------------------~~~------------------~v~~~~~sp~~~~l~~~~-~~~  624 (694)
T 3dm0_A          596 LYSLE--------------------------------ANS------------------VIHALCFSPNRYWLCAAT-EHG  624 (694)
T ss_dssp             EECCB--------------------------------CSS------------------CEEEEEECSSSSEEEEEE-TTE
T ss_pred             EEEec--------------------------------CCC------------------cEEEEEEcCCCcEEEEEc-CCC
Confidence            32221                                111                  678899999998888776 566


Q ss_pred             EEEEECCCceeeeEeecCC-------------------cceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        436 IKLWCLTDYVCLKSLEGHD-------------------ASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       436 i~i~d~~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      |++||+.+++.+..+..+.                   ..+++++|+|++++|++|+.||.|++|++.
T Consensus       625 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          625 IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             EEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             EEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            9999999998887765332                   137899999999999999999999999985

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=9.7e-36  Score=287.10  Aligned_cols=348  Identities=13%  Similarity=0.139  Sum_probs=242.3

Q ss_pred             CcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC--------
Q psy10942         24 RDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG--------   94 (537)
Q Consensus        24 ~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~--------   94 (537)
                      .++.+++|+++.++....+. +..++.++  .+.|.       ++.++++++.||.|++||+.+++....+.        
T Consensus        21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~--~~s~~-------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~   91 (408)
T 4a11_B           21 AESTRRVLGLELNKDRDVERIHGGGINTL--DIEPV-------EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIG   91 (408)
T ss_dssp             HHHHHHHHTEEECTTEEECCCCSSCEEEE--EECTT-------TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEEC
T ss_pred             ccCcceeeccccCcceeeeeccCCcEEEE--EEecC-------CCCEEEEEcCCCeEEEEECCCCcccceEecccccccc
Confidence            34568889988887777666 66778888  56774       55799999999999999999887766654        


Q ss_pred             ------CCcceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC--CCccE
Q psy10942         95 ------LSSPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE--EDSHI  165 (537)
Q Consensus        95 ------~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l  165 (537)
                            +.+.|.+++|+| ++++|++++.|+.|++||+.+           .+....+. +...+.+++|+|.  ++..+
T Consensus        92 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  159 (408)
T 4a11_B           92 RDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-----------LQTADVFN-FEETVYSHHMSPVSTKHCLV  159 (408)
T ss_dssp             TTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT-----------TEEEEEEE-CSSCEEEEEECSSCSSCCEE
T ss_pred             ccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC-----------Cccceecc-CCCceeeeEeecCCCCCcEE
Confidence                  557999999999 778999999999999999998           56666665 6667888888843  33477


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCe-
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDL-  242 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~-  242 (537)
                      ++++.++.    |                 ++||+       .+++..  +.     +|  ...|.++   +|+|++++ 
T Consensus       160 ~~~~~~~~----v-----------------~~~d~-------~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l  201 (408)
T 4a11_B          160 AVGTRGPK----V-----------------QLCDL-------KSGSCSHILQ-----GH--RQEILAV---SWSPRYDYI  201 (408)
T ss_dssp             EEEESSSS----E-----------------EEEES-------SSSCCCEEEC-----CC--CSCEEEE---EECSSCTTE
T ss_pred             EEEcCCCe----E-----------------EEEeC-------CCcceeeeec-----CC--CCcEEEE---EECCCCCcE
Confidence            77776666    9                 99999       777665  66     89  9999999   99999985 


Q ss_pred             eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCC
Q psy10942        243 FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKD  322 (537)
Q Consensus       243 l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~  322 (537)
                      +++++.||.++  +|++......                               +..++.......... ......|...
T Consensus       202 l~~~~~dg~i~--i~d~~~~~~~-------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~  247 (408)
T 4a11_B          202 LATASADSRVK--LWDVRRASGC-------------------------------LITLDQHNGKKSQAV-ESANTAHNGK  247 (408)
T ss_dssp             EEEEETTSCEE--EEETTCSSCC-------------------------------SEECCTTTTCSCCCT-TTSSCSCSSC
T ss_pred             EEEEcCCCcEE--EEECCCCCcc-------------------------------cccccccccccceee-ccccccccCc
Confidence            88999999999  9999874321                               111111111111111 3344678999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE---------------ecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR---------------GHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      |.+++|+|++++|++++.|+.|++||+... +......               ....+..++.++.++.|++||+.+++.
T Consensus       248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~  326 (408)
T 4a11_B          248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNG-ENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ  326 (408)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTC-CBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred             eeEEEEcCCCCEEEEecCCCeEEEEECCCC-ccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence            999999999999999999999999999843 3222111               112256677788899999999999999


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KG  466 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~  466 (537)
                      +..+..|..                 .|.+++|+|++++|++++.||.|++||+.+++++.....+...   ..+.+ ..
T Consensus       327 ~~~~~~~~~-----------------~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~  386 (408)
T 4a11_B          327 ITMLKGHYK-----------------TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFE  386 (408)
T ss_dssp             EEEECCCSS-----------------CEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred             eeeeccCCC-----------------eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccc
Confidence            999988876                 7888889999999999999999999999998877665533222   23333 33


Q ss_pred             CEEEEEeCCCcEEEEECCC
Q psy10942        467 TQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~  485 (537)
                      ..+.+.+.++.+++|+...
T Consensus       387 ~~~~~~~~~~~~~~W~~~~  405 (408)
T 4a11_B          387 DAWSSSDEEGGTSAWSHPQ  405 (408)
T ss_dssp             -------------------
T ss_pred             eeecccCccCceeecCCcc
Confidence            4556677899999998653

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=6e-35  Score=285.15  Aligned_cols=324  Identities=9%  Similarity=0.139  Sum_probs=230.5

Q ss_pred             cCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch------------hhhhhhhcccC
Q psy10942         93 HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS------------DEILDIALLGE  160 (537)
Q Consensus        93 ~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~  160 (537)
                      +...+.|.+++|+|+|++||+|+.||.|+|||+.++...........+....+.+|.            ..|.+++|+ +
T Consensus        25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~-~  103 (447)
T 3dw8_B           25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL-P  103 (447)
T ss_dssp             CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC-C
T ss_pred             ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc-C
Confidence            444579999999999999999999999999999874211111112233678889998            889999999 4


Q ss_pred             CC--ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---------------------cc--
Q psy10942        161 ED--SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---------------------KH--  215 (537)
Q Consensus       161 ~~--~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---------------------l~--  215 (537)
                      ++  ..+++++.++.    |                 ++||+       ......                     +.  
T Consensus       104 ~~~~~~l~s~s~d~~----i-----------------~iw~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  155 (447)
T 3dw8_B          104 QKNAAQFLLSTNDKT----I-----------------KLWKI-------SERDKRPEGYNLKEEDGRYRDPTTVTTLRVP  155 (447)
T ss_dssp             CCSSSEEEEEECSSC----E-----------------EEEEE-------EEEEEEEECCSCC--------CCCCCSCCCC
T ss_pred             CCCcceEEEeCCCCe----E-----------------EEEec-------ccccCCcceecccCccccccCcccccceEec
Confidence            54  67888877766    9                 89988       443221                     00  


Q ss_pred             --------------ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942        216 --------------NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT  281 (537)
Q Consensus       216 --------------~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~  281 (537)
                                    .....+|  ...|.++   +|+|++++|+++ .|+.|+  +|++....                  
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~l~s~-~d~~i~--iwd~~~~~------------------  209 (447)
T 3dw8_B          156 VFRPMDLMVEASPRRIFANAH--TYHINSI---SINSDYETYLSA-DDLRIN--LWHLEITD------------------  209 (447)
T ss_dssp             EEEEEEEEEEEEEEEEECSCC--SSCCCEE---EECTTSSEEEEE-CSSEEE--EEETTEEE------------------
T ss_pred             cccchheeeeccceEEeccCC--CcceEEE---EEcCCCCEEEEe-CCCeEE--EEECCCCC------------------
Confidence                          0012378  8999999   999999999998 799999  99987421                  


Q ss_pred             CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcee----e
Q psy10942        282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKL----L  356 (537)
Q Consensus       282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~----~  356 (537)
                                   ..+.+++...         ..+..|...|.+++|+|++ ++|++++.||.|++||++ ..+.    +
T Consensus       210 -------------~~~~~~~~~~---------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~  266 (447)
T 3dw8_B          210 -------------RSFNIVDIKP---------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR-ASALCDRHS  266 (447)
T ss_dssp             -------------EEEEEEECCC---------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT-TCSSSCTTC
T ss_pred             -------------ceeeeeeccc---------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc-CCcccccee
Confidence                         1122333321         2356889999999999998 999999999999999998 3332    3


Q ss_pred             EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                      ..+..|...                    .....+..|..                 .+.+++|+|++++|++++. +.|
T Consensus       267 ~~~~~~~~~--------------------~~~~~~~~~~~-----------------~v~~~~~s~~g~~l~~~~~-~~v  308 (447)
T 3dw8_B          267 KLFEEPEDP--------------------SNRSFFSEIIS-----------------SISDVKFSHSGRYMMTRDY-LSV  308 (447)
T ss_dssp             EEECCC-------------------------CCHHHHHTT-----------------CEEEEEECTTSSEEEEEES-SEE
T ss_pred             eEeccCCCc--------------------cccccccccCc-----------------eEEEEEECCCCCEEEEeeC-CeE
Confidence            444433220                    00011112222                 7889999999999999999 999


Q ss_pred             EEEECCC-ceeeeEeecCCcc---------------eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee
Q psy10942        437 KLWCLTD-YVCLKSLEGHDAS---------------VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR  500 (537)
Q Consensus       437 ~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~  500 (537)
                      ++||+.+ ++++..+.+|...               +..++|+|++++|++++.||.|++||+.+++.+ .+..|..+..
T Consensus       309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~  387 (447)
T 3dw8_B          309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNK  387 (447)
T ss_dssp             EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCC
T ss_pred             EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccc
Confidence            9999997 8889999988642               234999999999999999999999999998876 4444432211


Q ss_pred             cc----------------------CCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        501 NS----------------------DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       501 ~~----------------------~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..                      ..........+   +|+|++++||+++.++ +.+|
T Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~p~~~~la~~~~~~-~~~~  442 (447)
T 3dw8_B          388 PRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT---AWHPKENIIAVATTNN-LYIF  442 (447)
T ss_dssp             TTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE---EECSSSSEEEEECSSC-EEEE
T ss_pred             cccccCCccccccCCcccccccccccccCCceeEE---EECCCCCEEEEEecce-eeee
Confidence            00                      00111122456   9999999999998776 5554

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=5.4e-35  Score=276.53  Aligned_cols=292  Identities=13%  Similarity=0.135  Sum_probs=221.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCc---cceEEeeeccceehhhh--cCCCcceEEEEEecc---ccEEEEEe
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGE---KSLLHYYETSAVKELYQ--HGLSSPLVRIVRSSV---KRMYAVVT  115 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s~~---~~~la~~~  115 (537)
                      +...+.++  .+.|.       +..++++++.   |+.|++||+.+++....  ..+.+.|.+++|+|+   +++|++++
T Consensus        17 h~~~v~~~--~~~p~-------~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~   87 (357)
T 3i2n_A           17 FNYTVFDC--KWVPC-------SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD   87 (357)
T ss_dssp             CSSCEEEE--EECTT-------SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred             CCCceEEE--EEcCC-------CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence            56677777  66885       5467777876   99999999998876433  345579999999999   69999999


Q ss_pred             CCceEEEEecccccCcccccccccc-eeEEeecchhhhhhh------hcccCCCccEEEeeeccccCCcccceeecccCC
Q psy10942        116 ADHNISLYRLNSETGLEERPNKILK-FRKQFVGFSDEILDI------ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANR  188 (537)
Q Consensus       116 ~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~------~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~  188 (537)
                      .|+.|++||+.+           .+ ....+.+|...|.++      +|+ ++++.|++++.++.    |          
T Consensus        88 ~dg~i~iwd~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~s-~~~~~l~~~~~d~~----i----------  141 (357)
T 3i2n_A           88 FGGNLHIWNLEA-----------PEMPVYSVKGHKEIINAIDGIGGLGIG-EGAPEIVTGSRDGT----V----------  141 (357)
T ss_dssp             TTSCEEEECTTS-----------CSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSC----E----------
T ss_pred             CCCeEEEEeCCC-----------CCccEEEEEecccceEEEeeccccccC-CCccEEEEEeCCCe----E----------
Confidence            999999999998           44 778889999999998      556 67888888887776    9          


Q ss_pred             CcchhhHHHHHHHHHhhhcccccc-c--ccccccccCCC--cCeEEEEeccC----cccCCCeeeeccCCCcceeccccc
Q psy10942        189 SHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRDE--LKTVTLLERGK----TVKEEDLFPRQSMEPSTLEELEKR  259 (537)
Q Consensus       189 ~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~~--~~~v~~~~~~~----~s~~~~~l~~~~~d~~i~~~iw~~  259 (537)
                             ++||+       ..... .  +.     .|..  ...+.++   +    |+|+++++++++.|+.++  +|++
T Consensus       142 -------~vwd~-------~~~~~~~~~~~-----~~~~~~~~~v~~~---~~~~~~~~~~~~l~~~~~d~~i~--i~d~  197 (357)
T 3i2n_A          142 -------KVWDP-------RQKDDPVANME-----PVQGENKRDCWTV---AFGNAYNQEERVVCAGYDNGDIK--LFDL  197 (357)
T ss_dssp             -------EEECT-------TSCSSCSEEEC-----CCTTSCCCCEEEE---EEECCCC-CCCEEEEEETTSEEE--EEET
T ss_pred             -------EEEeC-------CCCCCcceecc-----ccCCCCCCceEEE---EEEeccCCCCCEEEEEccCCeEE--EEEC
Confidence                   99999       66652 2  33     3300  2377777   6    677887777777777777  6666


Q ss_pred             cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC---CCCEEE
Q psy10942        260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP---NDKLLA  336 (537)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~  336 (537)
                      ..                                           ++..      ....|...|.+++|+|   ++++|+
T Consensus       198 ~~-------------------------------------------~~~~------~~~~~~~~v~~~~~~~~~~~~~~l~  228 (357)
T 3i2n_A          198 RN-------------------------------------------MALR------WETNIKNGVCSLEFDRKDISMNKLV  228 (357)
T ss_dssp             TT-------------------------------------------TEEE------EEEECSSCEEEEEESCSSSSCCEEE
T ss_pred             cc-------------------------------------------Ccee------eecCCCCceEEEEcCCCCCCCCEEE
Confidence            55                                           2211      1135677899999999   999999


Q ss_pred             EEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942        337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW  416 (537)
Q Consensus       337 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~  416 (537)
                      +++.||.|++||++ ..+....+..                           ..+..|..                 .+.
T Consensus       229 ~~~~dg~i~i~d~~-~~~~~~~~~~---------------------------~~~~~~~~-----------------~v~  263 (357)
T 3i2n_A          229 ATSLEGKFHVFDMR-TQHPTKGFAS---------------------------VSEKAHKS-----------------TVW  263 (357)
T ss_dssp             EEESTTEEEEEEEE-EEETTTEEEE---------------------------EEEECCSS-----------------CEE
T ss_pred             EECCCCeEEEEeCc-CCCcccceee---------------------------eccCCCcC-----------------CEE
Confidence            99999999999998 3332222210                           01112322                 788


Q ss_pred             EEEEcCCCC-EEEEEeCCCcEEEEECCCc-------------------eeeeEeecCCcceEEEEEecCCCEEE-EEeCC
Q psy10942        417 FVNFSPLDR-ILISSSGDATIKLWCLTDY-------------------VCLKSLEGHDASVLRCHFINKGTQIV-STGAD  475 (537)
Q Consensus       417 ~~~~s~~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d  475 (537)
                      +++|+|+++ +|++++.||.|++||+..+                   +.+..+.+|...|++++|+|++++|+ +++.|
T Consensus       264 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d  343 (357)
T 3i2n_A          264 QVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD  343 (357)
T ss_dssp             EEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             EEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC
Confidence            899999988 8999999999999998753                   46778889999999999999999998 89999


Q ss_pred             CcEEEEECCCCee
Q psy10942        476 GLLKLWSIKTSTC  488 (537)
Q Consensus       476 g~v~vwd~~~~~~  488 (537)
                      |.|++||+.+.+.
T Consensus       344 ~~i~iw~~~~~~~  356 (357)
T 3i2n_A          344 QTVRVLIVTKLNK  356 (357)
T ss_dssp             SEEEEEEECC---
T ss_pred             CcEEEEECCCccc
Confidence            9999999987654

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=5.4e-34  Score=261.60  Aligned_cols=251  Identities=16%  Similarity=0.107  Sum_probs=186.1

Q ss_pred             ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Cc--------ceEEE
Q psy10942        220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GT--------VELLA  289 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------v~~l~  289 (537)
                      .+|  ...|.++   +|+|+|++|++++.|+.|+  +|++.....  .+     ...+.+|..  .+        -.+|+
T Consensus         6 ~~h--~~~V~~~---~~s~~g~~las~s~D~~v~--iw~~~~~~~--~~-----~~~l~gH~~~V~~v~~s~~~~g~~l~   71 (297)
T 2pm7_B            6 NAH--NEMIHDA---VMDYYGKRMATCSSDKTIK--IFEVEGETH--KL-----IDTLTGHEGPVWRVDWAHPKFGTILA   71 (297)
T ss_dssp             CSC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEEBCSSCB--CC-----CEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred             cCC--cCceEEE---EECCCCCEEEEEeCCCEEE--EEecCCCCc--EE-----EEEEccccCCeEEEEecCCCcCCEEE
Confidence            499  9999999   9999999999999999999  999875321  11     333444433  11        15899


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCC
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGT  366 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~  366 (537)
                      +++.|++|++||+.++....   ...+..|...|.+++|+|+  +++|++++.|+.|++||++..... ...        
T Consensus        72 s~s~D~~v~iWd~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~--------  140 (297)
T 2pm7_B           72 SCSYDGKVMIWKEENGRWSQ---IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII--------  140 (297)
T ss_dssp             EEETTTEEEEEEBSSSCBCC---CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE--------
T ss_pred             EEcCCCEEEEEEcCCCceEE---EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee--------
Confidence            99999999999998764211   2345679999999999997  889999999999999999832111 112        


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce-
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV-  445 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-  445 (537)
                                              +..|...+.+++|+|+.....    ..-...+++++|++|+.|+.|++||+.+++ 
T Consensus       141 ------------------------~~~h~~~v~~~~~~p~~~~~~----~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~  192 (297)
T 2pm7_B          141 ------------------------IDAHAIGVNSASWAPATIEED----GEHNGTKESRKFVTGGADNLVKIWKYNSDAQ  192 (297)
T ss_dssp             ------------------------EECCSSCEEEEEECCCC----------------CCEEEEEETTSCEEEEEEETTTT
T ss_pred             ------------------------eecccCccceEeecCCccccc----ccCCCCCCcceEEEEcCCCcEEEEEEcCCCc
Confidence                                    233444444444444321100    000011236799999999999999998755 


Q ss_pred             ---eeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCe---eEEEe--cCCccceeccCCCCCCcccccc
Q psy10942        446 ---CLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTST---CVSTF--DKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       446 ---~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~---~~~~~--~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                         ....+.+|...|.+++|+|++   .+|++++.|++|++||++++.   ....+  ..|...+           .++ 
T Consensus       193 ~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v-----------~~~-  260 (297)
T 2pm7_B          193 TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-----------WRA-  260 (297)
T ss_dssp             EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE-----------EEE-
T ss_pred             eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE-----------EEE-
Confidence               667889999999999999984   899999999999999987643   12233  4567778           888 


Q ss_pred             ceeeecCCCEEEEEeCCCCEEeC
Q psy10942        515 RQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                        +|+|++++|++++.||.|+||
T Consensus       261 --~~s~~g~~las~~~D~~v~lw  281 (297)
T 2pm7_B          261 --SWSLSGNVLALSGGDNKVTLW  281 (297)
T ss_dssp             --EECSSSCCEEEEETTSCEEEE
T ss_pred             --EECCCCCEEEEEcCCCcEEEE
Confidence              999999999999999999998

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.9e-36  Score=291.26  Aligned_cols=323  Identities=14%  Similarity=0.146  Sum_probs=236.3

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeee-c-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccc---ee
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSY-P-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSA---VK   88 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~---~~   88 (537)
                      +++..+++++      .|+ .+++++..+ . +..++.++  .+.|.       ++.++++++.||.|++||+.+   +.
T Consensus        37 ~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~--~~s~~-------~~~~l~s~s~dg~v~vwd~~~~~~~~  100 (437)
T 3gre_A           37 PIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSS--AVSPG-------ETPYLITGSDQGVIKIWNLKEIIVGE  100 (437)
T ss_dssp             CCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEE--EEECS-------SSCEEEEEETTSEEEEEEHHHHHTTC
T ss_pred             Cccccccccc------ccc-ccceEEeeeccCCCCceEEE--EECCC-------CCCEEEEecCCceEEEeECcccccCc
Confidence            6777777765      387 567888877 4 45778888  55773       457999999999999999987   43


Q ss_pred             ---hhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc------------hhhhh
Q psy10942         89 ---ELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF------------SDEIL  153 (537)
Q Consensus        89 ---~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~  153 (537)
                         ....+.+.+.|.+++|+|++++|++++.|+.|++||+.....        ++....+.+|            ...+.
T Consensus       101 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~  172 (437)
T 3gre_A          101 VYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ--------ESEVKFLNCECIRKINLKNFGKNEYAV  172 (437)
T ss_dssp             CCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE--------TTEEEEEEEEEEEEEEGGGGSSCCCEE
T ss_pred             ccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC--------CceeeccccceeEEEEccCcccccCce
Confidence               233334557999999999999999999999999999962100        3444444443            22233


Q ss_pred             hhh--cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc--CCCcCe
Q psy10942        154 DIA--LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG--RDELKT  227 (537)
Q Consensus       154 ~~~--~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~--h~~~~~  227 (537)
                      ++.  ++ +++..+++++.++.    |                 ++||+       ++++..  +.     +  |  ...
T Consensus       173 ~~~~~~~-~~~~~l~~~~~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~~~h--~~~  216 (437)
T 3gre_A          173 RMRAFVN-EEKSLLVALTNLSR----V-----------------IIFDI-------RTLERLQIIE-----NSPR--HGA  216 (437)
T ss_dssp             EEEEEEC-SSCEEEEEEETTSE----E-----------------EEEET-------TTCCEEEEEE-----CCGG--GCC
T ss_pred             EEEEEEc-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCeeeEEEc-----cCCC--CCc
Confidence            333  22 56778888887777    9                 99999       777766  55     5  8  899


Q ss_pred             EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      |.++   +|+|++++|++++.||.|+  +||+..+.                                .+..+.      
T Consensus       217 v~~~---~~s~~~~~l~s~~~dg~i~--iwd~~~~~--------------------------------~~~~~~------  253 (437)
T 3gre_A          217 VSSI---CIDEECCVLILGTTRGIID--IWDIRFNV--------------------------------LIRSWS------  253 (437)
T ss_dssp             EEEE---EECTTSCEEEEEETTSCEE--EEETTTTE--------------------------------EEEEEB------
T ss_pred             eEEE---EECCCCCEEEEEcCCCeEE--EEEcCCcc--------------------------------EEEEEe------
Confidence            9999   9999999999999998888  88877621                                011111      


Q ss_pred             eeeeecccccccCCCeEEEEEc----CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVS----PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                               ..|...|.+++|+    |++++|++++.|+.|++||+. ..+.+..+..|..                   
T Consensus       254 ---------~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~-------------------  304 (437)
T 3gre_A          254 ---------FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV-KGHCQYAFINSDE-------------------  304 (437)
T ss_dssp             ---------CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT-TTEEEEEEESSSS-------------------
T ss_pred             ---------cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC-CCcEEEEEEcCCC-------------------
Confidence                     1455678999665    467789999999999999998 6666666665543                   


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCce---------EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec--
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQI---------ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG--  452 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--  452 (537)
                                   .+..+.++|++..+         ..+.|.+++|+ ++++|++|+.|+.|++||+.+++....+.+  
T Consensus       305 -------------~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~  370 (437)
T 3gre_A          305 -------------QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPS  370 (437)
T ss_dssp             -------------CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred             -------------CCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence                         11111122211000         11268889999 778999999999999999999887776665  


Q ss_pred             -----------------------------------CCcceEEEEEecC--CCEEEEEeCCCcEEEEE
Q psy10942        453 -----------------------------------HDASVLRCHFINK--GTQIVSTGADGLLKLWS  482 (537)
Q Consensus       453 -----------------------------------~~~~v~~~~~s~~--~~~l~s~~~dg~v~vwd  482 (537)
                                                         |.+.|++++|+++  +.+|++++.||.|+||+
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                                               8889999999998  78999999999999995

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.4e-35  Score=281.60  Aligned_cols=305  Identities=15%  Similarity=0.159  Sum_probs=228.3

Q ss_pred             CCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-----chhhhhhhhcccCC---C
Q psy10942         95 LSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-----FSDEILDIALLGEE---D  162 (537)
Q Consensus        95 ~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~---~  162 (537)
                      +.+.|.+++|+|+    ...+++++.++.|++||+.+           .+.+..+..     |...|.+++|+|..   +
T Consensus        17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   85 (366)
T 3k26_A           17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-----------QGEIRLLQSYVDADADENFYTCAWTYDSNTSH   85 (366)
T ss_dssp             TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-----------GGCEEEEEEEECSCTTCCEEEEEEEECTTTCC
T ss_pred             CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-----------CcEEEeeeeccccCCCCcEEEEEeccCCCCCC
Confidence            4479999999984    44566666677999999998           455555554     44679999999432   4


Q ss_pred             ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc-C
Q psy10942        163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK-E  239 (537)
Q Consensus       163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~  239 (537)
                      .+|++++.++.    |                 ++||+       .+++..  +.     +|  ...|.++   +|+| +
T Consensus        86 ~~l~~~~~dg~----i-----------------~v~d~-------~~~~~~~~~~-----~~--~~~i~~~---~~~~~~  127 (366)
T 3k26_A           86 PLLAVAGSRGI----I-----------------RIINP-------ITMQCIKHYV-----GH--GNAINEL---KFHPRD  127 (366)
T ss_dssp             EEEEEEETTCE----E-----------------EEECT-------TTCCEEEEEE-----SC--CSCEEEE---EECSSC
T ss_pred             CEEEEecCCCE----E-----------------EEEEc-------hhceEeeeec-----CC--CCcEEEE---EECCCC
Confidence            57888877766    9                 99999       777666  66     89  9999999   9999 8


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      +++|++++.|+.|+  +|++..+.                                           ....  ...+..|
T Consensus       128 ~~~l~s~~~dg~i~--iwd~~~~~-------------------------------------------~~~~--~~~~~~~  160 (366)
T 3k26_A          128 PNLLLSVSKDHALR--LWNIQTDT-------------------------------------------LVAI--FGGVEGH  160 (366)
T ss_dssp             TTEEEEEETTSCEE--EEETTTTE-------------------------------------------EEEE--ECSTTSC
T ss_pred             CCEEEEEeCCCeEE--EEEeecCe-------------------------------------------EEEE--ecccccc
Confidence            89999999888888  88876621                                           1000  1112568


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe----cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG----HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      ...|.+++|+|++++|++++.|+.|++||++ ..+....+..    .+++..+......    .    ..........|.
T Consensus       161 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~  231 (366)
T 3k26_A          161 RDEVLSADYDLLGEKIMSCGMDHSLKLWRIN-SKRMMNAIKESYDYNPNKTNRPFISQK----I----HFPDFSTRDIHR  231 (366)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEESC-SHHHHHHHHHHHTCCGGGCSSCCCCEE----E----CCCSEEECSSCS
T ss_pred             cCceeEEEECCCCCEEEEecCCCCEEEEECC-CCccccccceeEEecCCCCccccccee----e----ccCccccccCCc
Confidence            8899999999999999999999999999998 3333222211    0110000000000    0    000111222233


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce--------------eeeEeecCCcceEEEE
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV--------------CLKSLEGHDASVLRCH  461 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~v~~~~  461 (537)
                      .                 .|.+++|+  ++++++++.|+.|++||+.+++              .+..+..|...|++++
T Consensus       232 ~-----------------~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  292 (366)
T 3k26_A          232 N-----------------YVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR  292 (366)
T ss_dssp             S-----------------CCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC
T ss_pred             c-----------------eEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE
Confidence            3                 67888888  6799999999999999998763              4788889999999999


Q ss_pred             EecC--CCEEEEEeCCCcEEEEECCCCe----eEEEecCC--ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        462 FINK--GTQIVSTGADGLLKLWSIKTST----CVSTFDKH--ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       462 ~s~~--~~~l~s~~~dg~v~vwd~~~~~----~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      |+|+  +++|++++.||.|++||+.+++    ....+.+|  ...|           .++   +|+|++++|++++.||.
T Consensus       293 ~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~s~~~dg~  358 (366)
T 3k26_A          293 FSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAI-----------RQT---SFSRDSSILIAVCDDAS  358 (366)
T ss_dssp             CEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCE-----------EEE---EECTTSSEEEEEETTSE
T ss_pred             EcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCce-----------EEE---EeCCCCCeEEEEeCCCE
Confidence            9999  9999999999999999999875    44477777  6788           888   99999999999999999


Q ss_pred             EEeC
Q psy10942        534 VVVY  537 (537)
Q Consensus       534 i~vW  537 (537)
                      |++|
T Consensus       359 i~iw  362 (366)
T 3k26_A          359 IWRW  362 (366)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9998

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-36  Score=292.62  Aligned_cols=319  Identities=10%  Similarity=0.063  Sum_probs=214.6

Q ss_pred             CCcceEEEecCcceEEEEEcCccceee----eec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLR----SYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK   88 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~   88 (537)
                      |+++.|++++.|++|+|||+++++...    .+. +...+..+  .++|..  ..++++.+|++++.||.|++||+.+++
T Consensus       171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v--~wsp~~--~~~~~~~~LAs~s~DgtvrlWd~~~~~  246 (524)
T 2j04_B          171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL--KWHEGC--HAPHLVGCLSFVSQEGTINFLEIIDNA  246 (524)
T ss_dssp             -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE--EECSSC--CCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred             hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE--EECCCC--CCCCCCceEEEEecCCeEEEEEcCCCc
Confidence            678899999999999999998876532    233 24556667  567731  011235799999999999999998764


Q ss_pred             hh-----------hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh-
Q psy10942         89 EL-----------YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI-  155 (537)
Q Consensus        89 ~~-----------~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-  155 (537)
                      ..           ..+..+ ..|.+++|+|++ .||+|+.||+|++||+.++          ......+.+|...|.++ 
T Consensus       247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~----------~~~~~~~~~H~~~V~sv~  315 (524)
T 2j04_B          247 TDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDP----------EVPSFYDQVHDSYILSVS  315 (524)
T ss_dssp             SSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBC----------SSCSEEEECSSSCEEEEE
T ss_pred             cccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCC----------CCceEEeecccccEEEEE
Confidence            32           233433 689999999875 7999999999999999873          24456788999999999 


Q ss_pred             -hcccCCC-ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC--eEE
Q psy10942        156 -ALLGEED-SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK--TVT  229 (537)
Q Consensus       156 -~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~--~v~  229 (537)
                       +|+ +++ ..|++++.++.    |                 ++||+       ++.++.  +.     +|  ..  .|.
T Consensus       316 ~~~s-~~g~~~laS~S~D~t----v-----------------klWD~-------~~~~~~~~~~-----~~--~~~~~v~  359 (524)
T 2j04_B          316 TAYS-DFEDTVVSTVAVDGY----F-----------------YIFNP-------KDIATTKTTV-----SR--FRGSNLV  359 (524)
T ss_dssp             EECC-TTSCCEEEEEETTSE----E-----------------EEECG-------GGHHHHCEEE-----EE--CSCCSCC
T ss_pred             EEcC-CCCCeEEEEeccCCe----E-----------------EEEEC-------CCCCcccccc-----cc--cccCccc
Confidence             465 665 77888888777    9                 99999       766655  44     66  43  578


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      ++   +|+|+++.+++++.|++++  +|++...                                           ..  
T Consensus       360 ~v---~fsp~~~~l~s~~~d~tv~--lwd~~~~-------------------------------------------~~--  389 (524)
T 2j04_B          360 PV---VYCPQIYSYIYSDGASSLR--AVPSRAA-------------------------------------------FA--  389 (524)
T ss_dssp             CE---EEETTTTEEEEECSSSEEE--EEETTCT-------------------------------------------TC--
T ss_pred             ce---EeCCCcCeEEEeCCCCcEE--EEECccc-------------------------------------------cc--
Confidence            89   9999998888888888787  7776652                                           11  


Q ss_pred             eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        310 NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                         ...+.+|.+.|++++|+|++++|++|+.|++|++||+. .. .+........        ..               
T Consensus       390 ---~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~-~~-~~~~~~~~~~--------~~---------------  441 (524)
T 2j04_B          390 ---VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA-RR-LLHGIKNSSA--------TQ---------------  441 (524)
T ss_dssp             ---CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC-SS-TTTCC--------------C---------------
T ss_pred             ---ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech-Hh-hccccccCcc--------ce---------------
Confidence               12234688999999999999999999999999999986 21 1110000000        00               


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEEEEEecCCC-
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLRCHFINKGT-  467 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~-  467 (537)
                          +..                 .+.+++|+|+++.+.. ..  ...+|+.. ++..+..+.+|...|.+++|+|++. 
T Consensus       442 ----~~~-----------------~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~  497 (524)
T 2j04_B          442 ----KSL-----------------RLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAG  497 (524)
T ss_dssp             ----CCC-----------------EEEECBCCSSSCEEEE-CC--CCCCCC-------------CCCSCCCEEECCSTTT
T ss_pred             ----eee-----------------EEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecCCCceEEEEECCCCCCc
Confidence                000                 4567778888875532 22  23344433 4677888999999999999999954 


Q ss_pred             --EEEEEeCCCcEEEEECCC
Q psy10942        468 --QIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       468 --~l~s~~~dg~v~vwd~~~  485 (537)
                        .+|+|+.||.|+||+++-
T Consensus       498 ~~~lAsg~~~g~vrlw~l~~  517 (524)
T 2j04_B          498 GKCYAFSNSAGLLTLEYLSL  517 (524)
T ss_dssp             TTEEEEECTTSEEEEEECSC
T ss_pred             cHHHHhhccCceEEEEEccc
Confidence              999999999999999853

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=6.6e-34  Score=279.07  Aligned_cols=316  Identities=14%  Similarity=0.166  Sum_probs=245.8

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      ++|+.|.    +++|++|+.||.|++||+++++.+..+. +..++.++  .+.|        ++ ++++++.||.|++||
T Consensus       125 ~~~~~~~----~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l--~~~~--------~~-~l~s~s~dg~i~vwd  189 (464)
T 3v7d_B          125 ITCLQFE----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL--KYAH--------GG-ILVSGSTDRTVRVWD  189 (464)
T ss_dssp             EEEEEEE----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE--EECS--------TT-EEEEEETTSCEEEEE
T ss_pred             EEEEEEC----CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEE--EEcC--------CC-EEEEEeCCCCEEEEE
Confidence            4565554    4699999999999999999999999887 66677777  5566        43 899999999999999


Q ss_pred             ccceehhhhcCCC-cceEEEEEe--ccccEEEEEeCCceEEEEecccccCccc------------ccccccceeEEeecc
Q psy10942         84 TSAVKELYQHGLS-SPLVRIVRS--SVKRMYAVVTADHNISLYRLNSETGLEE------------RPNKILKFRKQFVGF  148 (537)
Q Consensus        84 ~~~~~~~~~~~~~-~~v~~~~~s--~~~~~la~~~~d~~i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~  148 (537)
                      +.+++.+..+..| +.|.+++|+  +++++|++++.|+.|++||+.+......            .+.........+.+|
T Consensus       190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (464)
T 3v7d_B          190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  269 (464)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred             CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence            9999999888855 799999998  5889999999999999999987432210            011111236677888


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK  226 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~  226 (537)
                      ...+.++.   ++++.+++++.++.    |                 ++||+       .+++..  +.     +|  ..
T Consensus       270 ~~~v~~~~---~~~~~l~~~~~d~~----i-----------------~vwd~-------~~~~~~~~~~-----~~--~~  311 (464)
T 3v7d_B          270 MASVRTVS---GHGNIVVSGSYDNT----L-----------------IVWDV-------AQMKCLYILS-----GH--TD  311 (464)
T ss_dssp             SSCEEEEE---EETTEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SS
T ss_pred             cceEEEEc---CCCCEEEEEeCCCe----E-----------------EEEEC-------CCCcEEEEec-----CC--CC
Confidence            88887763   55788888887777    9                 99999       777766  66     89  99


Q ss_pred             eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942        227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      .|.++   +|+|+++++++++.|+.|+  +|++..+                                           +
T Consensus       312 ~v~~~---~~~~~~~~l~sg~~dg~i~--vwd~~~~-------------------------------------------~  343 (464)
T 3v7d_B          312 RIYST---IYDHERKRCISASMDTTIR--IWDLENG-------------------------------------------E  343 (464)
T ss_dssp             CEEEE---EEETTTTEEEEEETTSCEE--EEETTTT-------------------------------------------E
T ss_pred             CEEEE---EEcCCCCEEEEEeCCCcEE--EEECCCC-------------------------------------------c
Confidence            99999   9999999999998888888  8877652                                           1


Q ss_pred             eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      .     ...+.+|...|.+++|+  +++|++++.||.|++||+.. ........ +..                      
T Consensus       344 ~-----~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~----------------------  392 (464)
T 3v7d_B          344 L-----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTN----------------------  392 (464)
T ss_dssp             E-----EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTT----------------------
T ss_pred             E-----EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCC----------------------
Confidence            1     22335688899999997  57999999999999999983 22221111 111                      


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-eecCCcceEEEEEecC
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LEGHDASVLRCHFINK  465 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~  465 (537)
                                                 .+..++|+|+++++++++ ||.|++||+.+++.+.. +..|...|.+++|+ +
T Consensus       393 ---------------------------~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~  443 (464)
T 3v7d_B          393 ---------------------------LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-G  443 (464)
T ss_dssp             ---------------------------CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-T
T ss_pred             ---------------------------CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-C
Confidence                                       556678899999999998 89999999999998876 66788999999998 3


Q ss_pred             CCEEEEEeCCCcEEEE
Q psy10942        466 GTQIVSTGADGLLKLW  481 (537)
Q Consensus       466 ~~~l~s~~~dg~v~vw  481 (537)
                      ..++++++.||.+.+|
T Consensus       444 ~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          444 KTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             TEEEEEEEETTEEEEE
T ss_pred             CEEEEEEEeCCeEEEE
Confidence            3455566667765544

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.9e-35  Score=278.49  Aligned_cols=304  Identities=14%  Similarity=0.089  Sum_probs=234.8

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCC-cceEEEEEeccccEEEEEeCCceE
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNI  120 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i  120 (537)
                      +.+++.++  .+.|        +++++++++.++.|++||+.+++  .+..+..| +.|.+++|+|++++|++++.|+.|
T Consensus         7 ~~~~i~~~--~~s~--------~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i   76 (372)
T 1k8k_C            7 LVEPISCH--AWNK--------DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA   76 (372)
T ss_dssp             CSSCCCEE--EECT--------TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             cCCCeEEE--EECC--------CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence            45677777  5677        66899999999999999999987  77777644 699999999999999999999999


Q ss_pred             EEEecccccCccccccccccee--EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHH
Q psy10942        121 SLYRLNSETGLEERPNKILKFR--KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTF  198 (537)
Q Consensus       121 ~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~w  198 (537)
                      ++||+.+           .+..  ..+..|...|.+++|+ ++++++++++.++.    +                 ++|
T Consensus        77 ~vwd~~~-----------~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----v-----------------~i~  123 (372)
T 1k8k_C           77 YVWTLKG-----------RTWKPTLVILRINRAARCVRWA-PNEKKFAVGSGSRV----I-----------------SIC  123 (372)
T ss_dssp             EEEEEET-----------TEEEEEEECCCCSSCEEEEEEC-TTSSEEEEEETTSS----E-----------------EEE
T ss_pred             EEEECCC-----------CeeeeeEEeecCCCceeEEEEC-CCCCEEEEEeCCCE----E-----------------EEE
Confidence            9999987           3433  3446788899999999 77888888887776    9                 999


Q ss_pred             HHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee
Q psy10942        199 ERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG  277 (537)
Q Consensus       199 d~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~  277 (537)
                      |+       ...... .......+|  ...|.++   +|+|++++|++++.|+.++  +|++.........     .   
T Consensus       124 d~-------~~~~~~~~~~~~~~~~--~~~i~~~---~~~~~~~~l~~~~~dg~i~--~~d~~~~~~~~~~-----~---  181 (372)
T 1k8k_C          124 YF-------EQENDWWVCKHIKKPI--RSTVLSL---DWHPNSVLLAAGSCDFKCR--IFSAYIKEVEERP-----A---  181 (372)
T ss_dssp             EE-------ETTTTEEEEEEECTTC--CSCEEEE---EECTTSSEEEEEETTSCEE--EEECCCTTTSCCC-----C---
T ss_pred             Ee-------cCCCcceeeeeeeccc--CCCeeEE---EEcCCCCEEEEEcCCCCEE--EEEcccccccccc-----c---
Confidence            98       655421 111111278  8999999   9999999999999999999  9998653211100     0   


Q ss_pred             eeeeCCcceEEEEEeCCCeEEEEE--CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942        278 AFYTGGTVELLASGSLDKTVKVWS--TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL  355 (537)
Q Consensus       278 ~~~~~~~v~~l~~~~~d~~i~i~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  355 (537)
                                         ...|.  ...++.     ...+..|...|.+++|+|++++|++++.|+.|++||+. ..+.
T Consensus       182 -------------------~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~  236 (372)
T 1k8k_C          182 -------------------PTPWGSKMPFGEL-----MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-KKMA  236 (372)
T ss_dssp             -------------------CBTTBSCCCTTCE-----EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-GTTE
T ss_pred             -------------------ccccccccchhhh-----eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC-CCce
Confidence                               00011  112222     23345788999999999999999999999999999998 4555


Q ss_pred             eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942        356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT  435 (537)
Q Consensus       356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  435 (537)
                      +..+..|..                                                 .+.+++|+|++++++++ .|+.
T Consensus       237 ~~~~~~~~~-------------------------------------------------~v~~~~~~~~~~~l~~~-~d~~  266 (372)
T 1k8k_C          237 VATLASETL-------------------------------------------------PLLAVTFITESSLVAAG-HDCF  266 (372)
T ss_dssp             EEEEECSSC-------------------------------------------------CEEEEEEEETTEEEEEE-TTSS
T ss_pred             eEEEccCCC-------------------------------------------------CeEEEEEecCCCEEEEE-eCCe
Confidence            555554433                                                 78889999999988888 8999


Q ss_pred             EEEEECCC--cee--e------------------------------------eEe-ecCCcceEEEEEe-cCC---CEEE
Q psy10942        436 IKLWCLTD--YVC--L------------------------------------KSL-EGHDASVLRCHFI-NKG---TQIV  470 (537)
Q Consensus       436 i~i~d~~~--~~~--~------------------------------------~~~-~~~~~~v~~~~~s-~~~---~~l~  470 (537)
                      |++|++.+  ++.  +                                    ..+ .+|...|++++|+ +++   ++|+
T Consensus       267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~  346 (372)
T 1k8k_C          267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC  346 (372)
T ss_dssp             CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred             EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence            99999987  421  0                                    223 4899999999976 566   9999


Q ss_pred             EEeCCCcEEEEECCCCe
Q psy10942        471 STGADGLLKLWSIKTST  487 (537)
Q Consensus       471 s~~~dg~v~vwd~~~~~  487 (537)
                      +++.||.|++|++.+++
T Consensus       347 s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          347 TTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             EEETTSEEEEEEHHHHH
T ss_pred             EecCCCceEEEEecChh
Confidence            99999999999987654

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-34  Score=267.58  Aligned_cols=292  Identities=15%  Similarity=0.155  Sum_probs=233.6

Q ss_pred             ceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC-CcceEEEEEeccccEEEEE
Q psy10942         37 KQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL-SSPLVRIVRSSVKRMYAVV  114 (537)
Q Consensus        37 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~  114 (537)
                      +.++.+. +..++.++  .+ |        ++.++++++.||.|++||+.+++....+.. .+.|.+++|+|++++|+++
T Consensus         9 ~~~~~l~~h~~~v~~~--~~-~--------~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~   77 (313)
T 3odt_A            9 QLSATLKGHDQDVRDV--VA-V--------DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFG   77 (313)
T ss_dssp             EEEEEECCCSSCEEEE--EE-E--------ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred             HHHHHhhCCCCCcEEE--Ee-c--------CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEe
Confidence            5555565 55667777  44 5        456899999999999999998887776664 4799999999999999999


Q ss_pred             eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhh
Q psy10942        115 TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWF  194 (537)
Q Consensus       115 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  194 (537)
                      +.|+.|++|++.....        .+....+.+|...|.+++|.   ++.+++++.++.    +                
T Consensus        78 ~~dg~i~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~----i----------------  126 (313)
T 3odt_A           78 GKDTMINGVPLFATSG--------EDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKT----A----------------  126 (313)
T ss_dssp             ETTSCEEEEETTCCTT--------SCC-CEECCCSSCEEEEEEE---TTEEEEEETTSE----E----------------
T ss_pred             cCCCeEEEEEeeecCC--------CCcccchhhcccCEEEEEec---CCEEEEEeCCCC----E----------------
Confidence            9999999999876311        35567888999999999995   667888887776    9                


Q ss_pred             HHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccc
Q psy10942        195 DKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE  273 (537)
Q Consensus       195 ~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~  273 (537)
                       ++||.       ......+.     .|  ...+.++   .++| +++++++++.|+.++  +|+...            
T Consensus       127 -~~~d~-------~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~l~~~~~d~~i~--i~d~~~------------  174 (313)
T 3odt_A          127 -KVWKE-------GSLVYNLQ-----AH--NASVWDA---KVVSFSENKFLTASADKTIK--LWQNDK------------  174 (313)
T ss_dssp             -EEEET-------TEEEEEEE-----CC--SSCEEEE---EEEETTTTEEEEEETTSCEE--EEETTE------------
T ss_pred             -EEEcC-------CcEEEecc-----cC--CCceeEE---EEccCCCCEEEEEECCCCEE--EEecCc------------
Confidence             99985       44434466     88  9999999   8888 888888888888888  887322            


Q ss_pred             cceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy10942        274 AEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL  353 (537)
Q Consensus       274 ~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  353 (537)
                                            .+.               .....|...+.+++|+|++. +++++.|+.|++||++ ..
T Consensus       175 ----------------------~~~---------------~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~-~~  215 (313)
T 3odt_A          175 ----------------------VIK---------------TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH-TG  215 (313)
T ss_dssp             ----------------------EEE---------------EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT-TC
T ss_pred             ----------------------eEE---------------EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC-ch
Confidence                                  000               01122678899999999998 8999999999999998 55


Q ss_pred             eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                      +.+..+..|..                                                 .+.+++|+|++ .|++++.|
T Consensus       216 ~~~~~~~~~~~-------------------------------------------------~i~~~~~~~~~-~l~~~~~d  245 (313)
T 3odt_A          216 DVLRTYEGHES-------------------------------------------------FVYCIKLLPNG-DIVSCGED  245 (313)
T ss_dssp             CEEEEEECCSS-------------------------------------------------CEEEEEECTTS-CEEEEETT
T ss_pred             hhhhhhhcCCc-------------------------------------------------eEEEEEEecCC-CEEEEecC
Confidence            55555554433                                                 78899999999 58899999


Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      |.|++||+.+++++..+..|...|.+++|+|+++ +++++.||.|++||+++++.....
T Consensus       246 g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~  303 (313)
T 3odt_A          246 RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED  303 (313)
T ss_dssp             SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred             CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence            9999999999999999999999999999999998 667999999999999887765443

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1e-33  Score=263.18  Aligned_cols=269  Identities=14%  Similarity=0.192  Sum_probs=210.2

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +|+++ .|+.|++||+.+++++..+..+   ..|.+++|+|++++||+|+.|++|++||+.+           ++.+..+
T Consensus        38 ~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-----------~~~~~~~  105 (318)
T 4ggc_A           38 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-----------QKRLRNM  105 (318)
T ss_dssp             EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------TEEEEEE
T ss_pred             EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC-----------ceeEEEe
Confidence            56655 5999999999999987766532   5799999999999999999999999999999           7888999


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGR  222 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h  222 (537)
                      .+|...+.++.+.   +..+++++.++.    +                 ++|+.       ......   +.     +|
T Consensus       106 ~~h~~~~~~~~~~---~~~l~s~~~~~~----~-----------------~~~~~-------~~~~~~~~~~~-----~~  149 (318)
T 4ggc_A          106 TSHSARVGSLSWN---SYILSSGSRSGH----I-----------------HHHDV-------RVAEHHVATLS-----GH  149 (318)
T ss_dssp             ECCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----CC
T ss_pred             cCccceEEEeecC---CCEEEEEecCCc----e-----------------Eeeec-------CCCceeEEEEc-----Cc
Confidence            9999877766554   567777776665    7                 66766       443332   55     89


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...+..+   .++++++++++++.|+.++  +|++..+......                                  
T Consensus       150 --~~~~~~~---~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~----------------------------------  188 (318)
T 4ggc_A          150 --SQEVCGL---RWAPDGRHLASGGNDNLVN--VWPSAPGEGGWVP----------------------------------  188 (318)
T ss_dssp             --SSCEEEE---EECTTSSEEEEEETTSCEE--EEESSCBTTBSCC----------------------------------
T ss_pred             --cCceEEE---EEcCCCCEEEEEecCccee--EEECCCCcccccc----------------------------------
Confidence              9999999   9999999999999999999  9988763211000                                  


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEE---EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEE
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL---ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKL  379 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l---~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i  379 (537)
                                ......+...|.+++++|++..+   ++++.++.|++||.. ......... +                 
T Consensus       189 ----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~-~~~~~~~~~-~-----------------  239 (318)
T 4ggc_A          189 ----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSAVD-A-----------------  239 (318)
T ss_dssp             ----------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT-TCCEEEEEE-C-----------------
T ss_pred             ----------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc-ccccccccc-c-----------------
Confidence                      12234566789999999876533   345567778888876 322222211 1                 


Q ss_pred             EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcce
Q psy10942        380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDASV  457 (537)
Q Consensus       380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v  457 (537)
                                    ..                  .+..+.|+|+++.+++++  .|+.|++||+.+++++.++.+|.+.|
T Consensus       240 --------------~~------------------~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V  287 (318)
T 4ggc_A          240 --------------HS------------------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV  287 (318)
T ss_dssp             --------------SS------------------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred             --------------ee------------------eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence                          11                  677788889888887765  78999999999999999999999999


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        458 LRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      ++++|+|++++|++++.||+|+|||+.+..
T Consensus       288 ~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          288 LSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             EEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            999999999999999999999999987643

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.4e-33  Score=272.41  Aligned_cols=276  Identities=18%  Similarity=0.269  Sum_probs=220.2

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ....|+||+++ +||+|. |++|+|||..+           ++..+.+.  +|...|++++|+ +++++|++++.++.  
T Consensus       107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~t-----------g~~~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~--  170 (420)
T 4gga_A          107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAE--  170 (420)
T ss_dssp             TCBCEEECTTS-EEEEEE-TTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSC--
T ss_pred             cceeEEECCCC-EEEEEe-CCEEEEEECCC-----------CCEEEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCe--
Confidence            46679999864 777765 89999999999           56666554  677789999999 78899999888877  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                        |                 ++||+       +++++.  +.     +|  ...+.++   ++  ++..+++|+.|+.++
T Consensus       171 --v-----------------~iWd~-------~~~~~~~~~~-----~h--~~~v~~~---s~--~~~~l~sgs~d~~i~  212 (420)
T 4gga_A          171 --V-----------------QLWDV-------QQQKRLRNMT-----SH--SARVGSL---SW--NSYILSSGSRSGHIH  212 (420)
T ss_dssp             --E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EE--ETTEEEEEETTSEEE
T ss_pred             --E-----------------EEEEc-------CCCcEEEEEe-----CC--CCceEEE---ee--CCCEEEEEeCCCcee
Confidence              9                 99999       877776  66     89  8888888   54  456777777777777


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +|+....                                           ...    ...+.+|...+..+.++|+++
T Consensus       213 --~~d~~~~-------------------------------------------~~~----~~~~~~h~~~~~~~~~~~~g~  243 (420)
T 4gga_A          213 --HHDVRVA-------------------------------------------EHH----VATLSGHSQEVCGLRWAPDGR  243 (420)
T ss_dssp             --EEETTSS-------------------------------------------SCE----EEEEECCSSCEEEEEECTTSS
T ss_pred             --Eeeeccc-------------------------------------------cee----eEEecccccceeeeeecCCCC
Confidence              7765542                                           111    223457888999999999999


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      ++++++.|+.+++|+........                             ..+.....+..                 
T Consensus       244 ~l~s~~~D~~v~i~~~~~~~~~~-----------------------------~~~~~~~~~~~-----------------  277 (420)
T 4gga_A          244 HLASGGNDNLVNVWPSAPGEGGW-----------------------------VPLQTFTQHQG-----------------  277 (420)
T ss_dssp             EEEEEETTSCEEEEESSCCSSCS-----------------------------CCSEEECCCSS-----------------
T ss_pred             eeeeeeccccceEEeeccccccc-----------------------------eeeeeecccCC-----------------
Confidence            99999999999999987322110                             11122223333                 


Q ss_pred             eeeEEEEcCCC-CEEEEE--eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCee
Q psy10942        414 GVWFVNFSPLD-RILISS--SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTC  488 (537)
Q Consensus       414 ~i~~~~~s~~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~  488 (537)
                      .|.+++|+|++ .+++++  +.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++++  .|+.|+|||+.++++
T Consensus       278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~  356 (420)
T 4gga_A          278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK  356 (420)
T ss_dssp             CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred             ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence            67777787765 455554  57999999999999999988855 5689999999999998775  689999999999999


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +..+.+|...|           +++   +|+|||++|+||+.|++|+||
T Consensus       357 v~~l~gH~~~V-----------~~l---~~spdg~~l~S~s~D~tvriW  391 (420)
T 4gga_A          357 VAELKGHTSRV-----------LSL---TMSPDGATVASAAADETLRLW  391 (420)
T ss_dssp             EEEECCCSSCE-----------EEE---EECTTSSCEEEEETTTEEEEE
T ss_pred             EEEEcCCCCCE-----------EEE---EEcCCCCEEEEEecCCeEEEE
Confidence            99999999999           999   999999999999999999999

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=1.3e-32  Score=245.69  Aligned_cols=292  Identities=11%  Similarity=0.103  Sum_probs=204.4

Q ss_pred             ceEEEEEeccc-c--EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         98 PLVRIVRSSVK-R--MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        98 ~v~~~~~s~~~-~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      .+.++.|-..| +  .++++++ ..|++|+...+        ...+.++++..|+.+|..++|.|..-+.+.++-  +. 
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~-  108 (356)
T 2w18_A           41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDA--------WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL--GN-  108 (356)
T ss_dssp             EEEEEEEC----CEEEEEEEES-SEEEEEEESSS--------SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--CS-
T ss_pred             EEeeeeeccCCCCccEEEEecc-ceEEEcccCCC--------ccceeeEEEeccCceeEEEEEcCcccceeeeee--cc-
Confidence            45566664333 2  4667766 67999999982        113889999999999999999954444443332  11 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC----CCeeeeccCCC
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE----EDLFPRQSMEP  250 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~----~~~l~~~~~d~  250 (537)
                         +                                           +  ...|.++   +++|+    ++++++++.+ 
T Consensus       109 ---~-------------------------------------------~--~~~v~sl---a~spd~~~~~~~l~s~g~~-  136 (356)
T 2w18_A          109 ---L-------------------------------------------E--IREIRAL---FCSSDDESEKQVLLKSGNI-  136 (356)
T ss_dssp             ---S-------------------------------------------S--EEEEEEE---CC------CCEEEEEEEEE-
T ss_pred             ---c-------------------------------------------c--ccceEEE---EECCCccccccEEEeCCCe-
Confidence               2                                           2  6779999   99999    9999998744 


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe--CCCeEEEEECCC-CceeeeeecccccccCCCeEEEE
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS--LDKTVKVWSTTG-GLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~d~~i~i~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                       ++  +|++.++                       +.+.+++  .|+.|++|++.. ++.     ...+..|...++.++
T Consensus       137 -~~--v~~l~~g-----------------------~lv~ss~~g~d~~V~~~~~s~dG~~-----~~s~~~~~~~v~~l~  185 (356)
T 2w18_A          137 -KA--VLGLTKR-----------------------RLVSSSGTLSDQQVEVMTFAEDGGG-----KENQFLMPPEETILT  185 (356)
T ss_dssp             -EE--EEEETTT-----------------------EEEEEESSSTTCEEEEEEECTTSCE-----EEEEEECCCSSCEEE
T ss_pred             -EE--EEecCCC-----------------------cEEEecccCCCCcEEEEEECCCCce-----eeeeccCCCceeeEE
Confidence             77  8887552                       2344433  599999999944 543     334568888899999


Q ss_pred             EcC---CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        328 VSP---NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       328 ~s~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      |+|   ++.+|++++.|++|++||+. .++.+..+..|..                             +...+.+++|+
T Consensus       186 fs~~~g~~~~LaSgS~D~TIkIWDl~-TGk~l~tL~g~~~-----------------------------~v~~v~~vafS  235 (356)
T 2w18_A          186 FAEVQGMQEALLGTTIMNNIVIWNLK-TGQLLKKMHIDDS-----------------------------YQASVCHKAYS  235 (356)
T ss_dssp             EEEEETSTTEEEEEETTSEEEEEETT-TCCEEEEEECCC--------------------------------CCCEEEEEE
T ss_pred             eeccCCCCceEEEecCCCcEEEEECC-CCcEEEEEcCCCc-----------------------------ceeeeEEEEEC
Confidence            999   77999999999999999998 6667776654321                             11234455566


Q ss_pred             cCCCceEEeeeeEEEEc-CC-CCEEEEEeCCCcEEEEECCCceeeeEe-----ecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942        405 KDENQIITGGVWFVNFS-PL-DRILISSSGDATIKLWCLTDYVCLKSL-----EGHDASVLRCHFINKGTQIVSTGADGL  477 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s-~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~~~dg~  477 (537)
                      |++..+++       ++ ++ ...+++|+.|++|++||..+++.+..+     .+|...+.+..++  +.++|+++.|++
T Consensus       236 pdG~~lvs-------~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT  306 (356)
T 2w18_A          236 EMGLLFIV-------LSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGT  306 (356)
T ss_dssp             ETTEEEEE-------EC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSC
T ss_pred             CCCCEEEE-------eccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCc
Confidence            65443322       11 11 124678999999999999999887765     3676665555544  789999999999


Q ss_pred             EEEEECCCCeeEEEecCCccceeccCCCCCCccc-cccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        478 LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF-GLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       478 v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+|||+.+++++.++.+|...+           . .+   +|||||++|++|+.|++|+||
T Consensus       307 IkIWDl~tGk~l~tL~gH~~~v-----------vs~v---afSPDG~~LaSGS~D~TIklW  353 (356)
T 2w18_A          307 IAIWDLLLGQCTALLPPVSDQH-----------WSFV---KWSGTDSHLLAGQKDGNIFVY  353 (356)
T ss_dssp             EEEEETTTCSEEEEECCC--CC-----------CCEE---EECSSSSEEEEECTTSCEEEE
T ss_pred             EEEEECCCCcEEEEecCCCCCe-----------EEEE---EECCCCCEEEEEECCCcEEEe
Confidence            9999999999999999998766           4 47   999999999999999999999

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.6e-34  Score=274.19  Aligned_cols=272  Identities=15%  Similarity=0.187  Sum_probs=216.6

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCC--CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGL--SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~--~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      .+++++.++.|++||+.+++....+..  .+.|.+++|+|++++|++++.||.|++||+.+           .+.+..+.
T Consensus       105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~-----------~~~~~~~~  173 (401)
T 4aez_A          105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES-----------QTKLRTMA  173 (401)
T ss_dssp             SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------CCEEEEEC
T ss_pred             CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC-----------CeEEEEec
Confidence            477788899999999999987766654  46899999999999999999999999999998           68888999


Q ss_pred             cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-c--ccccccccCC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRD  223 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~  223 (537)
                      +|...|.+++|+   ++.+++++.++.    |                 ++||+       ..... .  +.     +| 
T Consensus       174 ~~~~~v~~~~~~---~~~l~~~~~dg~----i-----------------~i~d~-------~~~~~~~~~~~-----~~-  216 (401)
T 4aez_A          174 GHQARVGCLSWN---RHVLSSGSRSGA----I-----------------HHHDV-------RIANHQIGTLQ-----GH-  216 (401)
T ss_dssp             CCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----CC-
T ss_pred             CCCCceEEEEEC---CCEEEEEcCCCC----E-----------------EEEec-------ccCcceeeEEc-----CC-
Confidence            999999999996   567888777766    9                 99999       63332 2  66     89 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                       ...|.++   +|+|++++|++++.|+.++  +|++...                                         
T Consensus       217 -~~~v~~~---~~~~~~~~l~s~~~d~~v~--iwd~~~~-----------------------------------------  249 (401)
T 4aez_A          217 -SSEVCGL---AWRSDGLQLASGGNDNVVQ--IWDARSS-----------------------------------------  249 (401)
T ss_dssp             -SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTCS-----------------------------------------
T ss_pred             -CCCeeEE---EEcCCCCEEEEEeCCCeEE--EccCCCC-----------------------------------------
Confidence             9999999   9999999999999888888  8887652                                         


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                        ..     ...+..|...|.+++|+|++. ++++++  .|+.|++||+. ..+.+..+.. ..                
T Consensus       250 --~~-----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~-~~~~~~~~~~-~~----------------  304 (401)
T 4aez_A          250 --IP-----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA-TGARVNTVDA-GS----------------  304 (401)
T ss_dssp             --SE-----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT-TCCEEEEEEC-SS----------------
T ss_pred             --Cc-----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC-CCCEEEEEeC-CC----------------
Confidence              11     112346788899999999764 555554  68889999887 4444443321 11                


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE--eCCCcEEEEECCCceee--eEeecCCcc
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS--SGDATIKLWCLTDYVCL--KSLEGHDAS  456 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~d~~~~~~~--~~~~~~~~~  456 (537)
                                                       .+.+++|+|++++++++  +.||.|++||+.+++..  ..+.+|...
T Consensus       305 ---------------------------------~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~  351 (401)
T 4aez_A          305 ---------------------------------QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR  351 (401)
T ss_dssp             ---------------------------------CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred             ---------------------------------cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence                                             78889999999999995  48999999999985544  457789999


Q ss_pred             eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       457 v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      |.+++|+|++++|++++.||.|++|++.+++.+....
T Consensus       352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          352 VLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             CCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence            9999999999999999999999999999988776543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=9.8e-35  Score=281.80  Aligned_cols=284  Identities=13%  Similarity=0.073  Sum_probs=211.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec---cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      ..|+||+|+| .++++|++|+.||.|+|||+.+++....+.   +..+|.++  .+.|.       ++.+|++++.||.|
T Consensus       120 ~~V~~l~~~P-~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l--~f~p~-------~~~~l~s~s~D~~v  189 (435)
T 4e54_B          120 RRATSLAWHP-THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGL--KFNPL-------NTNQFYASSMEGTT  189 (435)
T ss_dssp             SCEEEEEECS-SCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEE--EECSS-------CTTEEEEECSSSCE
T ss_pred             CCEEEEEEeC-CCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEE--EEeCC-------CCCEEEEEeCCCEE
Confidence            3599999995 366799999999999999998876554333   66788888  56875       66799999999999


Q ss_pred             EeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhh
Q psy10942         80 HYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIA  156 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  156 (537)
                      ++||++++........+   ..+.+++|+|++++|++|+.|+.|++||+.+            +.+..+.+|...|.+++
T Consensus       190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------------~~~~~~~~h~~~v~~v~  257 (435)
T 4e54_B          190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------------KELWNLRMHKKKVTHVA  257 (435)
T ss_dssp             EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------------CBCCCSBCCSSCEEEEE
T ss_pred             EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------------ceeEEEecccceEEeee
Confidence            99999876543333332   3688999999999999999999999999876            44567889999999999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCc
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                      |+|.....+++++.++.    |                 ++||+       ...+.........+|  ...|.++   +|
T Consensus       258 ~~p~~~~~~~s~s~d~~----v-----------------~iwd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~  304 (435)
T 4e54_B          258 LNPCCDWFLATASVDQT----V-----------------KIWDL-------RQVRGKASFLYSLPH--RHPVNAA---CF  304 (435)
T ss_dssp             ECTTCSSEEEEEETTSB----C-----------------CEEET-------TTCCSSSCCSBCCBC--SSCEEEC---CB
T ss_pred             ecCCCceEEEEecCcce----e-----------------eEEec-------ccccccceEEEeeec--cccccce---eE
Confidence            99544456667776766    9                 99998       665543111122389  9999999   99


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccc-----cc--eeeeeeCCcceEEEEE------------eCCCeE
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE-----AE--HGAFYTGGTVELLASG------------SLDKTV  297 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~v~~l~~~------------~~d~~i  297 (537)
                      +|+|++|++++.|+.|+  +|++..............     ..  ....+...  ..++++            ..++.|
T Consensus       305 spdg~~l~s~~~D~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~i  380 (435)
T 4e54_B          305 SPDGARLLTTDQKSEIR--VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRY--NLIVVGRYPDPNFKSCTPYELRTI  380 (435)
T ss_dssp             CTTSSEEEEEESSSCEE--EEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSS--SCEEEECCCCTTSCCSSTTCCCCE
T ss_pred             CCCCCeeEEEcCCCEEE--EEECCCCccceEEecccccccccceeEEEEEcCCC--CEEEEEEcCCCCeEEEEecCCCEE
Confidence            99999999999999999  999987543221100000     00  00111111  223333            244689


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEE-EEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCV-TVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      ++||..+++....    ...+|...|.++ +|+|+|++|++|+ |+.|++|+++
T Consensus       381 ~iwd~~~g~~~~~----l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~  429 (435)
T 4e54_B          381 DVFDGNSGKMMCQ----LYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ  429 (435)
T ss_dssp             EEECSSSCCEEEE----ECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred             EEEECCCCcEEEE----EeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence            9999999876432    245688888887 6999999999876 7899999998

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=7.9e-34  Score=260.50  Aligned_cols=258  Identities=17%  Similarity=0.216  Sum_probs=191.0

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~  173 (537)
                      +.+.|.+++|+|+|++||+++.|++|+|||+.+..         .+.+..+.+|.+.|.+++|+++ +++.|++++.++.
T Consensus         8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~---------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~   78 (297)
T 2pm7_B            8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK   78 (297)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC---------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred             CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC---------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence            34689999999999999999999999999997521         3567889999999999999854 4678888888777


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--c--ccccccccCCCcCeEEEEeccCcccC--CCeeeecc
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--Q--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQS  247 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~  247 (537)
                          |                 ++||+       ++++.  .  +.     +|  ...|.++   +|+|+  +.+|++++
T Consensus        79 ----v-----------------~iWd~-------~~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~g~~l~s~s  120 (297)
T 2pm7_B           79 ----V-----------------MIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEYGPMLLVAS  120 (297)
T ss_dssp             ----E-----------------EEEEB-------SSSCBCCCEEEC-----CC--SSCEEEE---EECCGGGCSEEEEEE
T ss_pred             ----E-----------------EEEEc-------CCCceEEEEEee-----cC--CCceeEE---EeCcCCCCcEEEEEE
Confidence                9                 99998       66532  2  45     89  9999999   99997  78888888


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      .|+.++  +|++......                                         .     ...+.+|...|.+++
T Consensus       121 ~d~~v~--~wd~~~~~~~-----------------------------------------~-----~~~~~~h~~~v~~~~  152 (297)
T 2pm7_B          121 SDGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAHAIGVNSAS  152 (297)
T ss_dssp             TTSEEE--EEEBCSSSCB-----------------------------------------C-----CEEEECCSSCEEEEE
T ss_pred             CCCcEE--EEEecCCCce-----------------------------------------e-----eeeeecccCccceEe
Confidence            888888  8887652100                                         0     112356888899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe----eeeeeccCCcceEEEEE
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST----CVSTFDKHALKIWTLAI  403 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~  403 (537)
                      |+|++..-     ++.               .....++.++++++.|++|++||+++++    ....+.+|..       
T Consensus       153 ~~p~~~~~-----~~~---------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~-------  205 (297)
T 2pm7_B          153 WAPATIEE-----DGE---------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-------  205 (297)
T ss_dssp             ECCCC--------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-------
T ss_pred             ecCCcccc-----ccc---------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-------
Confidence            99974210     000               0001224455556666666666555443    3445556655       


Q ss_pred             ecCCCceEEeeeeEEEEcCCC---CEEEEEeCCCcEEEEECCCce---eeeEe--ecCCcceEEEEEecCCCEEEEEeCC
Q psy10942        404 TKDENQIITGGVWFVNFSPLD---RILISSSGDATIKLWCLTDYV---CLKSL--EGHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                                .|.+++|+|++   ++|++++.|++|++||+.+..   ....+  ..|...|.+++|+|++++||+++.|
T Consensus       206 ----------~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D  275 (297)
T 2pm7_B          206 ----------WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD  275 (297)
T ss_dssp             ----------CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred             ----------ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence                      67788888874   899999999999999987642   11223  4678899999999999999999999


Q ss_pred             CcEEEEECC
Q psy10942        476 GLLKLWSIK  484 (537)
Q Consensus       476 g~v~vwd~~  484 (537)
                      +.|++|+..
T Consensus       276 ~~v~lw~~~  284 (297)
T 2pm7_B          276 NKVTLWKEN  284 (297)
T ss_dssp             SCEEEEEEC
T ss_pred             CcEEEEEEC
Confidence            999999976

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-33  Score=271.50  Aligned_cols=272  Identities=16%  Similarity=0.195  Sum_probs=219.1

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-chhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-FSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      .+.+++|++  ..+++++.|+.|++||+.+           ++....+.. |...|.+++|+ +++.+|++++.++.   
T Consensus        95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~-----------~~~~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~---  157 (401)
T 4aez_A           95 YLNLLDWSN--LNVVAVALERNVYVWNADS-----------GSVSALAETDESTYVASVKWS-HDGSFLSVGLGNGL---  157 (401)
T ss_dssp             TCBCEEECT--TSEEEEEETTEEEEEETTT-----------CCEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTSC---
T ss_pred             eEEEEeecC--CCEEEEECCCeEEEeeCCC-----------CcEeEeeecCCCCCEEEEEEC-CCCCEEEEECCCCe---
Confidence            355566665  4577888999999999998           566666655 78889999999 68888888887776   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||+       .+++..  +.     +|  ...|.++   +|  +++++++++.|+.++ 
T Consensus       158 -i-----------------~iwd~-------~~~~~~~~~~-----~~--~~~v~~~---~~--~~~~l~~~~~dg~i~-  199 (401)
T 4aez_A          158 -V-----------------DIYDV-------ESQTKLRTMA-----GH--QARVGCL---SW--NRHVLSSGSRSGAIH-  199 (401)
T ss_dssp             -E-----------------EEEET-------TTCCEEEEEC-----CC--SSCEEEE---EE--ETTEEEEEETTSEEE-
T ss_pred             -E-----------------EEEEC-------cCCeEEEEec-----CC--CCceEEE---EE--CCCEEEEEcCCCCEE-
Confidence             9                 99999       776665  66     89  9999999   77  456777777777777 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|++...                                           ...    ...+..|...|.+++|+|++++
T Consensus       200 -i~d~~~~-------------------------------------------~~~----~~~~~~~~~~v~~~~~~~~~~~  231 (401)
T 4aez_A          200 -HHDVRIA-------------------------------------------NHQ----IGTLQGHSSEVCGLAWRSDGLQ  231 (401)
T ss_dssp             -EEETTSS-------------------------------------------SCE----EEEEECCSSCEEEEEECTTSSE
T ss_pred             -EEecccC-------------------------------------------cce----eeEEcCCCCCeeEEEEcCCCCE
Confidence             7776541                                           111    2234578899999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      |++++.|+.|++||+. ....+..+..|..                                                 .
T Consensus       232 l~s~~~d~~v~iwd~~-~~~~~~~~~~~~~-------------------------------------------------~  261 (401)
T 4aez_A          232 LASGGNDNVVQIWDAR-SSIPKFTKTNHNA-------------------------------------------------A  261 (401)
T ss_dssp             EEEEETTSCEEEEETT-CSSEEEEECCCSS-------------------------------------------------C
T ss_pred             EEEEeCCCeEEEccCC-CCCccEEecCCcc-------------------------------------------------e
Confidence            9999999999999998 4444444333332                                                 7


Q ss_pred             eeEEEEcCCC-CEEEEEe--CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeE
Q psy10942        415 VWFVNFSPLD-RILISSS--GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTCV  489 (537)
Q Consensus       415 i~~~~~s~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~  489 (537)
                      +.+++|+|++ .++++++  .|+.|++||+.+++++..+. +...|.+++|+|++++|++++  .||.|++||+.+++..
T Consensus       262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~  340 (401)
T 4aez_A          262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT  340 (401)
T ss_dssp             CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred             EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce
Confidence            8888899976 5666655  69999999999999998887 667899999999999999954  8999999999987655


Q ss_pred             EE--ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        490 ST--FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       490 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..  +.+|...|           .++   +|+|++++|++++.||.|++|
T Consensus       341 ~~~~~~~h~~~v-----------~~~---~~s~dg~~l~s~~~dg~i~iw  376 (401)
T 4aez_A          341 KQVDIPAHDTRV-----------LYS---ALSPDGRILSTAASDENLKFW  376 (401)
T ss_dssp             EEEEEECCSSCC-----------CEE---EECTTSSEEEEECTTSEEEEE
T ss_pred             eEEEecCCCCCE-----------EEE---EECCCCCEEEEEeCCCcEEEE
Confidence            44  67899999           899   999999999999999999998

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.6e-34  Score=275.41  Aligned_cols=299  Identities=12%  Similarity=0.081  Sum_probs=214.8

Q ss_pred             ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce--ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEE
Q psy10942         45 YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV--KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNIS  121 (537)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~--~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~  121 (537)
                      ..++.++  .+.|        +++++++++.|+.|++||+.++  +.+..+..| +.|.+++|+|++++|++++.|+.|+
T Consensus        11 ~~~v~~~--~~s~--------~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~   80 (377)
T 3dwl_C           11 PKPSYEH--AFNS--------QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY   80 (377)
T ss_dssp             SSCCSCC--EECS--------SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred             CCcEEEE--EECC--------CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence            4567777  5688        6689999999999999999988  778888765 6999999999999999999999999


Q ss_pred             EEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       122 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                      +||+.++.        .......+.+|...|.+++|+ ++++.|++++.++.    |                 ++||+ 
T Consensus        81 vwd~~~~~--------~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----i-----------------~iwd~-  129 (377)
T 3dwl_C           81 VYEKRPDG--------TWKQTLVLLRLNRAATFVRWS-PNEDKFAVGSGARV----I-----------------SVCYF-  129 (377)
T ss_dssp             EC--------------CCCCEEECCCCSSCEEEEECC-TTSSCCEEEESSSC----E-----------------EECCC-
T ss_pred             EEEcCCCC--------ceeeeeEecccCCceEEEEEC-CCCCEEEEEecCCe----E-----------------EEEEE-
Confidence            99999831        012566778899999999999 68888888888777    9                 99998 


Q ss_pred             HHhhhcccccc---c--cccccccc-CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942        202 LEAKFKQSSSQ---Q--KHNTERLG-RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE  275 (537)
Q Consensus       202 ~~~~~~~~~~~---~--l~~~~~~~-h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~  275 (537)
                            ...+.   .  +.     + |  ...|.++   +|+|++++|++++.|+.++  +|++.........     ..
T Consensus       130 ------~~~~~~~~~~~~~-----~~h--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~~~~~~~-----~~  186 (377)
T 3dwl_C          130 ------EQENDWWVSKHLK-----RPL--RSTILSL---DWHPNNVLLAAGCADRKAY--VLSAYVRDVDAKP-----EA  186 (377)
T ss_dssp             -----------CCCCEEEC-----SSC--CSCEEEE---EECTTSSEEEEEESSSCEE--EEEECCSSCC-CC-----CS
T ss_pred             ------CCcccceeeeEee-----ccc--CCCeEEE---EEcCCCCEEEEEeCCCEEE--EEEEEecccCCCc-----cc
Confidence                  66552   2  44     6 9  9999999   9999999999999999999  9999763211110     00


Q ss_pred             eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942        276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL  355 (537)
Q Consensus       276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  355 (537)
                                            ..|....  ..... ...+ .|...|.+++|+|++++|++++.|+.|++||+.....+
T Consensus       187 ----------------------~~~~~~~--~~~~~-~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~  240 (377)
T 3dwl_C          187 ----------------------SVWGSRL--PFNTV-CAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP  240 (377)
T ss_dssp             ----------------------CSSCSCC--CEEEE-EECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred             ----------------------ccccccc--chhhh-hhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence                                  0000000  00111 2233 78999999999999999999999999999999833221


Q ss_pred             ---eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        356 ---LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       356 ---~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                         +..+..                                |..                 .+.+++|+|++++|++++.
T Consensus       241 ~~~~~~~~~--------------------------------~~~-----------------~v~~~~~s~~~~~l~~~~~  271 (377)
T 3dwl_C          241 PRALITVKL--------------------------------SQL-----------------PLRSLLWANESAIVAAGYN  271 (377)
T ss_dssp             EEECCCEEC--------------------------------SSS-----------------CEEEEEEEETTEEEEEESS
T ss_pred             ceeeEeecC--------------------------------CCC-----------------ceEEEEEcCCCCEEEEEcC
Confidence               223333                                322                 6778888888888888876


Q ss_pred             CCcEEEEECCCce--ee----------------------------------eE----------------eecCCcceEEE
Q psy10942        433 DATIKLWCLTDYV--CL----------------------------------KS----------------LEGHDASVLRC  460 (537)
Q Consensus       433 dg~i~i~d~~~~~--~~----------------------------------~~----------------~~~~~~~v~~~  460 (537)
                      ++.+ +|+.....  ..                                  ..                ...|.+.|+++
T Consensus       272 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~  350 (377)
T 3dwl_C          272 YSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATL  350 (377)
T ss_dssp             SSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEE
T ss_pred             CcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEE
Confidence            6555 66554111  00                                  00                11389999999


Q ss_pred             EEecC-CC---EEEEEeCCCcEEEEEC
Q psy10942        461 HFINK-GT---QIVSTGADGLLKLWSI  483 (537)
Q Consensus       461 ~~s~~-~~---~l~s~~~dg~v~vwd~  483 (537)
                      ++.+. +.   .|+|++.||.|++||+
T Consensus       351 ~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          351 RPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             EEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             eccCCCCCceEEEEeecCCCcEEEecC
Confidence            97664 33   6999999999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-35  Score=279.75  Aligned_cols=319  Identities=12%  Similarity=0.041  Sum_probs=238.7

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      +..|.+++|+  |||++++|++.|++|+  |.+.++.+.  .+...+..+  .++|        ++       .++.+.+
T Consensus        15 ~~~v~sv~~S--pDG~~iASas~D~TV~--d~~~~~~l~--gh~~~v~~V--~FsP--------dg-------~~~~~~~   71 (588)
T 2j04_A           15 EDWKNNLTWA--RDGTLYLTTFPDISIG--QPKYAKDIN--CNSKNLFHV--KEFP--------LE-------FENKLDF   71 (588)
T ss_dssp             SSSSCCEEEC--TTSCEEEECSSSEEEE--EECCCSCCS--SBGGGTEEE--EEEC--------CC-------CCCTTTT
T ss_pred             hccEEEEEEC--CCCCEEEEEcCCceee--cccccceec--CCCccEEEE--EECC--------CC-------CcceEEE
Confidence            3468999999  8999999999999999  766665442  245556666  5588        33       3454555


Q ss_pred             eeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhh
Q psy10942         82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIA  156 (537)
Q Consensus        82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~  156 (537)
                      |+.+. ..+..+.+.+.|.+++|||||++||+++.||.|++||.++             ++..+. |..     .+.+++
T Consensus        72 ~~~~~-~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-------------~l~~l~-~~~~~~~~sv~sva  136 (588)
T 2j04_A           72 ELAQQ-NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-------------MLTNLD-SKGNLSSRTYHCFE  136 (588)
T ss_dssp             SCCCS-SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-------------EEEECC-CSSCSTTTCEEEEE
T ss_pred             EeCCC-ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-------------eeeecc-CCCccccccEEEEE
Confidence            54332 2344444567899999999999999999999999999433             455556 554     489999


Q ss_pred             cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--------c-ccccccccCCCcCe
Q psy10942        157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--------Q-KHNTERLGRDELKT  227 (537)
Q Consensus       157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--------~-l~~~~~~~h~~~~~  227 (537)
                      |+ |++++|++++.++.    |                 ++||+       ..+..        . ++ ....+|  ...
T Consensus       137 fS-PDG~~LAsgs~DGt----V-----------------kIWd~-------~~~~l~~~~~i~l~ti~-~~~~gh--~~~  184 (588)
T 2j04_A          137 WN-PIESSIVVGNEDGE----L-----------------QFFSI-------RKNSENTPEFYFESSIR-LSDAGS--KDW  184 (588)
T ss_dssp             EC-SSSSCEEEEETTSE----E-----------------EEEEC-------CCCTTTCCCCEEEEEEE-CSCTTC--CCC
T ss_pred             Ec-CCCCEEEEEcCCCE----E-----------------EEEEC-------CCCccccccceeeeeee-cccccc--ccc
Confidence            99 89999999998887    9                 99999       66643        1 21 011378  899


Q ss_pred             EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      |.++   +|+|+|  +++++.|+.++  +|++..+...                                      +  .
T Consensus       185 V~sV---awSPdg--Laass~D~tVr--lWd~~~~~~~--------------------------------------~--~  217 (588)
T 2j04_A          185 VTHI---VWYEDV--LVAALSNNSVF--SMTVSASSHQ--------------------------------------P--V  217 (588)
T ss_dssp             EEEE---EEETTE--EEEEETTCCEE--EECCCSSSSC--------------------------------------C--C
T ss_pred             EEEE---EEcCCc--EEEEeCCCeEE--EEECCCCccc--------------------------------------c--c
Confidence            9999   999999  78888899999  8888763100                                      0  0


Q ss_pred             eeeeecccc-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        308 LLNVLRGHK-KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       308 ~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                           ...+ .+|...|.+++|+  ++.|++++ ++.|++||+. +.+......+|..                      
T Consensus       218 -----~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~-~~~~~~~~~gh~~----------------------  266 (588)
T 2j04_A          218 -----SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLK-NYSISSLKTGSLE----------------------  266 (588)
T ss_dssp             -----EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETT-TTEEEEEECSCCS----------------------
T ss_pred             -----eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECC-CCeEEEEEcCCCc----------------------
Confidence                 1112 3577889999999  68899887 6999999998 4443222223443                      


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEE--cCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNF--SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                                                 .+..++|  +|++..+++++.||+ ++|...                .++++|
T Consensus       267 ---------------------------~V~~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~sp  302 (588)
T 2j04_A          267 ---------------------------NFHIIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTA  302 (588)
T ss_dssp             ---------------------------CCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEEEC
T ss_pred             ---------------------------eEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECC
Confidence                                       7888999  999999999999999 999876                266999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      |+..+++.  |+++++|+...+. +..+++ ...|           .++   +|||||+.+|+++.
T Consensus       303 d~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I-----------~~v---a~SPdG~~lA~~~~  350 (588)
T 2j04_A          303 DNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVI-----------HGI---SLSPDGYSIAIVYD  350 (588)
T ss_dssp             CCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEE-----------EEE---EECTTSSEEEEEEE
T ss_pred             CceEEEEc--CCEEEEEECCCCc-eeeecc-ceEE-----------EEE---EECCCCCEEEEEEe
Confidence            99888875  9999999975444 445544 6677           888   99999999998864

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=2.6e-33  Score=263.29  Aligned_cols=283  Identities=13%  Similarity=0.120  Sum_probs=225.5

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc-cEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS-HIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~~~~  173 (537)
                      +.+.|.+++|+|++++|++++.|+.|++||+.++..        ......+.+|...|.+++|+ ++++ ++++++.++.
T Consensus        10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~--------~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~   80 (342)
T 1yfq_A           10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSLRYKHPLLCCNFI-DNTDLQIYVGTVQGE   80 (342)
T ss_dssp             CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------EEEEEEEEECSSCEEEEEEE-ESSSEEEEEEETTSC
T ss_pred             CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc--------cccceeeeecCCceEEEEEC-CCCCcEEEEEcCCCe
Confidence            346899999999999999999999999999988311        12345666899999999999 6778 8888887766


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-c-cccccccc--CCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q-KHNTERLG--RDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~-l~~~~~~~--h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                          |                 ++||+       ..... . +.     +  |  ...|.++   +|+| ++++++++.|
T Consensus        81 ----i-----------------~~wd~-------~~~~~~~~~~-----~~~~--~~~v~~l---~~~~-~~~l~s~~~d  121 (342)
T 1yfq_A           81 ----I-----------------LKVDL-------IGSPSFQALT-----NNEA--NLGICRI---CKYG-DDKLIAASWD  121 (342)
T ss_dssp             ----E-----------------EEECS-------SSSSSEEECB-----SCCC--CSCEEEE---EEET-TTEEEEEETT
T ss_pred             ----E-----------------EEEEe-------ccCCceEecc-----ccCC--CCceEEE---EeCC-CCEEEEEcCC
Confidence                9                 99986       22222 2 55     7  9  9999999   9999 9999999999


Q ss_pred             CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS  329 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  329 (537)
                      +.++  +|++......                              .+.. .   .+.     ...+. |...|.+++|+
T Consensus       122 ~~i~--iwd~~~~~~~------------------------------~~~~-~---~~~-----~~~~~-~~~~v~~~~~~  159 (342)
T 1yfq_A          122 GLIE--VIDPRNYGDG------------------------------VIAV-K---NLN-----SNNTK-VKNKIFTMDTN  159 (342)
T ss_dssp             SEEE--EECHHHHTTB------------------------------CEEE-E---ESC-----SSSSS-SCCCEEEEEEC
T ss_pred             CeEE--EEcccccccc------------------------------cccc-c---CCe-----eeEEe-eCCceEEEEec
Confidence            9999  9998752100                              0000 0   000     11222 77889999999


Q ss_pred             CCCCEEEEEeCCCcEEEEEccC-CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTG-GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      |++  +++++.|+.|++||++. ..........                               .+..            
T Consensus       160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------------------~~~~------------  194 (342)
T 1yfq_A          160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-------------------------------GLKY------------  194 (342)
T ss_dssp             SSE--EEEEESTTEEEEEESSCCTTCCCEEEEC-------------------------------SCSS------------
T ss_pred             CCc--EEEEeCCCeEEEEECCccccccceeeec-------------------------------CCCC------------
Confidence            887  89999999999999984 2221111111                               1111            


Q ss_pred             ceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCc------eeeeEeecCCc---------ceEEEEEecCCCEEEEE
Q psy10942        409 QIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDY------VCLKSLEGHDA---------SVLRCHFINKGTQIVST  472 (537)
Q Consensus       409 ~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~  472 (537)
                           .+.+++|+| +++++++++.||.|++|++...      +....+..|..         .|.+++|+|++++|+++
T Consensus       195 -----~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  269 (342)
T 1yfq_A          195 -----QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA  269 (342)
T ss_dssp             -----CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred             -----ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence                 788899999 9999999999999999999886      77888888865         99999999999999999


Q ss_pred             eCCCcEEEEECCCCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      +.||.|++||+.+++.+..+.+| ...|           .++   +  |++++|++++.||.
T Consensus       270 ~~dg~i~vwd~~~~~~~~~~~~~h~~~v-----------~~~---~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          270 GSDGIISCWNLQTRKKIKNFAKFNEDSV-----------VKI---A--CSDNILCLATSDDT  315 (342)
T ss_dssp             ETTSCEEEEETTTTEEEEECCCCSSSEE-----------EEE---E--ECSSEEEEEEECTH
T ss_pred             cCCceEEEEcCccHhHhhhhhcccCCCc-----------eEe---c--CCCCeEEEEecCCc
Confidence            99999999999999999999998 9999           888   7  99999999999997

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=8.6e-34  Score=262.63  Aligned_cols=263  Identities=14%  Similarity=0.184  Sum_probs=198.7

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~  173 (537)
                      +.+.|.+++|+|+|++||+++.|++|++||+.++.         ...+..+.+|.+.|.+++|+++ +++.|++++.++.
T Consensus        12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~---------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~   82 (316)
T 3bg1_A           12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG---------QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK   82 (316)
T ss_dssp             --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE---------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred             ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC---------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence            34789999999999999999999999999998720         2356789999999999999854 4788888888777


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--c--ccccccccCCCcCeEEEEeccCcccC--CCeeeecc
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--Q--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQS  247 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~  247 (537)
                          |                 ++||+       +++..  .  +.     +|  ...|.++   +|+|+  +.+|++++
T Consensus        83 ----v-----------------~iWd~-------~~~~~~~~~~~~-----~h--~~~V~~v---~~~p~~~g~~lasgs  124 (316)
T 3bg1_A           83 ----V-----------------IIWRE-------ENGTWEKSHEHA-----GH--DSSVNSV---CWAPHDYGLILACGS  124 (316)
T ss_dssp             ----E-----------------EEECC-------SSSCCCEEEEEC-----CC--SSCCCEE---EECCTTTCSCEEEEC
T ss_pred             ----E-----------------EEEEC-------CCCcceEEEEcc-----CC--CCceEEE---EECCCCCCcEEEEEc
Confidence                9                 99999       66532  2  55     89  9999999   99998  78899999


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT  327 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (537)
                      .|+.++  +|++....                                .   |+.          ...+..|...|.+++
T Consensus       125 ~D~~i~--lwd~~~~~--------------------------------~---~~~----------~~~~~~h~~~v~~~~  157 (316)
T 3bg1_A          125 SDGAIS--LLTYTGEG--------------------------------Q---WEV----------KKINNAHTIGCNAVS  157 (316)
T ss_dssp             SSSCEE--EEEECSSS--------------------------------C---EEE----------CCBTTSSSSCBCCCE
T ss_pred             CCCCEE--EEecCCCC--------------------------------C---cce----------eeeeccccCCcceEE
Confidence            999999  88876521                                0   000          223456788899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC---eeeeeeccCCcceEEEEEe
Q psy10942        328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS---TCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~  404 (537)
                      |+|+...       +.+  .+.. ..      .....+.++++++.|++|++||++..   +.+..+.+|..        
T Consensus       158 ~~~~~~~-------~~~--~~~~-~~------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~--------  213 (316)
T 3bg1_A          158 WAPAVVP-------GSL--IDHP-SG------QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD--------  213 (316)
T ss_dssp             ECCCCCC---------------C-CS------CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS--------
T ss_pred             EccccCC-------ccc--cccc-cc------cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC--------
Confidence            9997420       000  0000 00      00122467888888888888888654   45566777776        


Q ss_pred             cCCCceEEeeeeEEEEcCCC----CEEEEEeCCCcEEEEECCCc---e-eeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942        405 KDENQIITGGVWFVNFSPLD----RILISSSGDATIKLWCLTDY---V-CLKSLEGHDASVLRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~d~~~~---~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  476 (537)
                               .|.+++|+|++    ++|++++.|++|++|++.+.   + ....+..|...|.+++|+|++++||+++.|+
T Consensus       214 ---------~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~  284 (316)
T 3bg1_A          214 ---------WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN  284 (316)
T ss_dssp             ---------CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred             ---------ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence                     66777777775    79999999999999998762   1 2345567899999999999999999999999


Q ss_pred             cEEEEECC
Q psy10942        477 LLKLWSIK  484 (537)
Q Consensus       477 ~v~vwd~~  484 (537)
                      .|++|+..
T Consensus       285 ~v~lw~~~  292 (316)
T 3bg1_A          285 KVTLWKES  292 (316)
T ss_dssp             CEEEEEEC
T ss_pred             eEEEEEEC
Confidence            99999975

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=8.6e-33  Score=256.94  Aligned_cols=275  Identities=18%  Similarity=0.247  Sum_probs=213.9

Q ss_pred             eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         99 LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        99 v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ...|+||+++ +||+| .|++|+|||+.+           +++++.+.  +|...|.+++|+ ++++++++++.++.   
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~t-----------g~~~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~---   90 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAE---   90 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSE---
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCC-----------CCEEEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCc---
Confidence            4678999987 77765 589999999999           66666654  577789999999 78889998888877   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||+       +++++.  +.     +|  ...+.++     ++++..+++++.++.++ 
T Consensus        91 -v-----------------~iw~~-------~~~~~~~~~~-----~h--~~~~~~~-----~~~~~~l~s~~~~~~~~-  132 (318)
T 4ggc_A           91 -V-----------------QLWDV-------QQQKRLRNMT-----SH--SARVGSL-----SWNSYILSSGSRSGHIH-  132 (318)
T ss_dssp             -E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE-----EEETTEEEEEETTSEEE-
T ss_pred             -E-----------------EEeec-------CCceeEEEec-----Cc--cceEEEe-----ecCCCEEEEEecCCceE-
Confidence             9                 99999       877776  66     88  7777666     44556777777777666 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|+...                                           ....    ...+.+|...+..+.+++++++
T Consensus       133 -~~~~~~-------------------------------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~  164 (318)
T 4ggc_A          133 -HHDVRV-------------------------------------------AEHH----VATLSGHSQEVCGLRWAPDGRH  164 (318)
T ss_dssp             -EEETTS-------------------------------------------SSCE----EEEEECCSSCEEEEEECTTSSE
T ss_pred             -eeecCC-------------------------------------------Ccee----EEEEcCccCceEEEEEcCCCCE
Confidence             665544                                           2111    2234578888999999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      |++++.|+.|++||+.......                             ........+..                 .
T Consensus       165 l~s~~~d~~i~iwd~~~~~~~~-----------------------------~~~~~~~~~~~-----------------~  198 (318)
T 4ggc_A          165 LASGGNDNLVNVWPSAPGEGGW-----------------------------VPLQTFTQHQG-----------------A  198 (318)
T ss_dssp             EEEEETTSCEEEEESSCBTTBS-----------------------------CCSEEECCCCS-----------------C
T ss_pred             EEEEecCcceeEEECCCCcccc-----------------------------cceeeecccCC-----------------c
Confidence            9999999999999998321110                             01111122222                 5


Q ss_pred             eeEEEEcCCCCE---EEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeE
Q psy10942        415 VWFVNFSPLDRI---LISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTCV  489 (537)
Q Consensus       415 i~~~~~s~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~  489 (537)
                      +.+++++|++..   +++++.++.|++||........... +...+..+.|+|+++.+++++  .|+.|++||+++++++
T Consensus       199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~  277 (318)
T 4ggc_A          199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV  277 (318)
T ss_dssp             EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred             eEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence            566666666542   3456778999999999887766655 677899999999999888765  7999999999999999


Q ss_pred             EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ..+.+|...|           +++   +|+|||++|+|++.||+|+||
T Consensus       278 ~~l~gH~~~V-----------~~l---~~spdg~~l~S~s~D~~v~iW  311 (318)
T 4ggc_A          278 AELKGHTSRV-----------LSL---TMSPDGATVASAAADETLRLW  311 (318)
T ss_dssp             EEECCCSSCE-----------EEE---EECTTSSCEEEEETTTEEEEE
T ss_pred             EEEcCCCCCE-----------EEE---EEcCCCCEEEEEecCCeEEEE
Confidence            9999999999           999   999999999999999999999

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-33  Score=268.25  Aligned_cols=267  Identities=10%  Similarity=0.054  Sum_probs=202.9

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ..+|.+++|||||+++|+++.|++|+  |...           .   +.+.+|...|.+++|+ |++       .++.  
T Consensus        15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~-----------~---~~l~gh~~~v~~V~Fs-Pdg-------~~~~--   68 (588)
T 2j04_A           15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKY-----------A---KDINCNSKNLFHVKEF-PLE-------FENK--   68 (588)
T ss_dssp             SSSSCCEEECTTSCEEEECSSSEEEE--EECC-----------C---SCCSSBGGGTEEEEEE-CCC-------CCCT--
T ss_pred             hccEEEEEECCCCCEEEEEcCCceee--cccc-----------c---ceecCCCccEEEEEEC-CCC-------Ccce--
Confidence            36899999999999999999999999  6444           2   3447999999999999 555       1222  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                        +                 .+|+.       +.....-.     .|  ...|.++   +|||+|++||+++.||.++  
T Consensus        69 --~-----------------~~~~~-------~~~~~~~~-----~~--~~~V~~v---awSPdG~~LAs~s~dg~V~--  110 (588)
T 2j04_A           69 --L-----------------DFELA-------QQNGLLNS-----QP--VCYPRVC---KPSPIDDWMAVLSNNGNVS--  110 (588)
T ss_dssp             --T-----------------TTSCC-------CSSCSSTT-----SC--SCCEEEE---EECSSSSCEEEEETTSCEE--
T ss_pred             --E-----------------EEEeC-------CCceEeec-----CC--CCcEEEE---EECCCCCEEEEEeCCCcEE--
Confidence              4                 44443       22222222     56  7889999   9999999999999999999  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      +|+...                                  .+...+ ...           .-....+.+++|||||++|
T Consensus       111 iwd~~~----------------------------------~l~~l~-~~~-----------~~~~~sv~svafSPDG~~L  144 (588)
T 2j04_A          111 VFKDNK----------------------------------MLTNLD-SKG-----------NLSSRTYHCFEWNPIESSI  144 (588)
T ss_dssp             EEETTE----------------------------------EEEECC-CSS-----------CSTTTCEEEEEECSSSSCE
T ss_pred             EEeCCc----------------------------------eeeecc-CCC-----------ccccccEEEEEEcCCCCEE
Confidence            998432                                  011101 000           0012358999999999999


Q ss_pred             EEEeCCCcEEEEEccCCce------eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        336 ASGSLDKTVKVWSTTGGLK------LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      ++|+.||+|++||+..+..      .+..+..+..                            +|..             
T Consensus       145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~----------------------------gh~~-------------  183 (588)
T 2j04_A          145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA----------------------------GSKD-------------  183 (588)
T ss_dssp             EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT----------------------------TCCC-------------
T ss_pred             EEEcCCCEEEEEECCCCccccccceeeeeeecccc----------------------------cccc-------------
Confidence            9999999999999983211      2344433221                            2222             


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee---eeEee-cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC---LKSLE-GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                          .|.+++|+|||  +++++.|+.|++||+..++.   ..+++ +|...|.+++|+  ++.||+++ ++.|++||+.+
T Consensus       184 ----~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~  254 (588)
T 2j04_A          184 ----WVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN  254 (588)
T ss_dssp             ----CEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT
T ss_pred             ----cEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC
Confidence                78899999999  88889999999999988763   35664 788899999999  58999997 69999999988


Q ss_pred             CeeEEEecCCccceeccCCCCCCccccccceee--ecCCCEEEEEeCCCCEEeC
Q psy10942        486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLC--SRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++......+|...+           .++   +|  +||+..|++++.||+ ++|
T Consensus       255 ~~~~~~~~gh~~~V-----------~~v---a~~~s~d~~~La~a~edG~-klw  293 (588)
T 2j04_A          255 YSISSLKTGSLENF-----------HII---PLNHEKESTILLMSNKTSY-KVL  293 (588)
T ss_dssp             TEEEEEECSCCSCC-----------CEE---EETTCSSCEEEEECSSCEE-EEE
T ss_pred             CeEEEEEcCCCceE-----------EEE---EeeeCCCCCEEEEEcCCCC-EEE
Confidence            88754444899999           999   99  999999999999999 887

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.4e-33  Score=263.87  Aligned_cols=291  Identities=10%  Similarity=0.057  Sum_probs=225.9

Q ss_pred             eeccceehhhhcCCC-cceEEEEEecc---ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSV---KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL  157 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  157 (537)
                      |+....+.+..+..| +.|.+++|+|+   |++|++++.|+.|++||+.+..         ......+.+|...|.+++|
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~h~~~v~~~~~   94 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---------QTIPKAQQMHTGPVLDVCW   94 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS---------CEEEEEEEECSSCEEEEEE
T ss_pred             CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC---------ceeEEEeccccCCEEEEEE
Confidence            444555566666655 79999999999   6999999999999999998620         3444788999999999999


Q ss_pred             ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCc
Q psy10942        158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                      + +++++|++++.++.    |                 ++||+       .+.+.. +.     +|  ...|.++   +|
T Consensus        95 ~-~~~~~l~s~~~dg~----v-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~  135 (368)
T 3mmy_A           95 S-DDGSKVFTASCDKT----A-----------------KMWDL-------SSNQAIQIA-----QH--DAPVKTI---HW  135 (368)
T ss_dssp             C-TTSSEEEEEETTSE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EE
T ss_pred             C-cCCCEEEEEcCCCc----E-----------------EEEEc-------CCCCceeec-----cc--cCceEEE---EE
Confidence            9 68888888887777    9                 99999       777766 66     89  9999999   99


Q ss_pred             --ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        237 --VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       237 --s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                        +|++++|++++.|+.++  +|++..+..                                +..               
T Consensus       136 ~~~~~~~~l~~~~~dg~i~--vwd~~~~~~--------------------------------~~~---------------  166 (368)
T 3mmy_A          136 IKAPNYSCVMTGSWDKTLK--FWDTRSSNP--------------------------------MMV---------------  166 (368)
T ss_dssp             EECSSCEEEEEEETTSEEE--EECSSCSSC--------------------------------SEE---------------
T ss_pred             EeCCCCCEEEEccCCCcEE--EEECCCCcE--------------------------------EEE---------------
Confidence              88998899998888888  888776310                                001               


Q ss_pred             cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                       +..+ ..+.++.+.+  ..+++++.++.+++|++.............                               .
T Consensus       167 -~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------------------------~  211 (368)
T 3mmy_A          167 -LQLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESP-------------------------------L  211 (368)
T ss_dssp             -EECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCS-------------------------------C
T ss_pred             -EecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhcccc-------------------------------c
Confidence             1111 2355555553  478888889999999998433322221111                               0


Q ss_pred             CcceEEEEEecCCCceEEeeeeEEEEcCCCC----EEEEEeCCCcEEEEECCCc---eeeeEeecCCc------------
Q psy10942        395 ALKIWTLAITKDENQIITGGVWFVNFSPLDR----ILISSSGDATIKLWCLTDY---VCLKSLEGHDA------------  455 (537)
Q Consensus       395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~----~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~------------  455 (537)
                      ..                 ...++++.++..    .+++++.||.|++||+...   +.+..+.+|..            
T Consensus       212 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (368)
T 3mmy_A          212 KH-----------------QHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIY  274 (368)
T ss_dssp             SS-----------------CEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEEC
T ss_pred             cC-----------------CCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccccccc
Confidence            01                 223333333332    3999999999999999886   56778888876            


Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       456 ~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      .|++++|+|++++|++++.||.|++||+.+++++..+.+|...|           .++   +|+|++++|++++.|+..+
T Consensus       275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----------~~~---~~s~~g~~l~~~s~d~~~~  340 (368)
T 3mmy_A          275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI-----------SAC---CFNHNGNIFAYASSYDWSK  340 (368)
T ss_dssp             CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE-----------EEE---EECTTSSCEEEEECCCSTT
T ss_pred             ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc-----------eEE---EECCCCCeEEEEecccccc
Confidence            79999999999999999999999999999999999999999999           999   9999999999999987644

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1e-33  Score=262.17  Aligned_cols=256  Identities=17%  Similarity=0.124  Sum_probs=185.6

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Cc--------ceEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GT--------VELLAS  290 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------v~~l~~  290 (537)
                      +|  .+.|.++   +|+|+|++|++++.|++++  +|++..+...  +     ...+.+|..  .+        -..|++
T Consensus        11 ~H--~~~V~~v---~~s~~g~~lasgs~D~~v~--lwd~~~~~~~--~-----~~~l~gH~~~V~~v~~~~~~~~~~l~s   76 (316)
T 3bg1_A           11 SH--EDMIHDA---QMDYYGTRLATCSSDRSVK--IFDVRNGGQI--L-----IADLRGHEGPVWQVAWAHPMYGNILAS   76 (316)
T ss_dssp             -----CCEEEE---EECGGGCEEEEEETTTEEE--EEEEETTEEE--E-----EEEEECCSSCEEEEEECCGGGSSCEEE
T ss_pred             cc--cCeEEEe---eEcCCCCEEEEEeCCCeEE--EEEecCCCcE--E-----EEEEcCCCccEEEEEeCCCCCCCEEEE
Confidence            99  9999999   9999999999999999999  9999864211  1     223334432  11        157999


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI  368 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l  368 (537)
                      ++.|++|++||++++....   ...+.+|...|.+++|+|+  +.+|++++.|+.|++||+......             
T Consensus        77 ~s~D~~v~iWd~~~~~~~~---~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~-------------  140 (316)
T 3bg1_A           77 CSYDRKVIIWREENGTWEK---SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW-------------  140 (316)
T ss_dssp             EETTSCEEEECCSSSCCCE---EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-------------
T ss_pred             EECCCEEEEEECCCCcceE---EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-------------
Confidence            9999999999998764211   2345689999999999998  789999999999999998832110             


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---e
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---V  445 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---~  445 (537)
                                       .....+..|...+.++.++|+...-.......-...+++++|++|+.|+.|++||+...   +
T Consensus       141 -----------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~  203 (316)
T 3bg1_A          141 -----------------EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK  203 (316)
T ss_dssp             -----------------EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred             -----------------ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence                             01122334555444445544421000000000000112578999999999999999754   5


Q ss_pred             eeeEeecCCcceEEEEEecCC----CEEEEEeCCCcEEEEECCCC---e-eEEEecCCccceeccCCCCCCcccccccee
Q psy10942        446 CLKSLEGHDASVLRCHFINKG----TQIVSTGADGLLKLWSIKTS---T-CVSTFDKHALKIRNSDSENDHKGFGLPRQL  517 (537)
Q Consensus       446 ~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~v~vwd~~~~---~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  517 (537)
                      ++..+.+|...|.+++|+|++    ++|++++.|++|++|++++.   + ....+..|...|           .++   +
T Consensus       204 ~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v-----------~~v---~  269 (316)
T 3bg1_A          204 EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVV-----------WHV---S  269 (316)
T ss_dssp             EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCE-----------EEE---E
T ss_pred             eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcE-----------EEE---E
Confidence            677889999999999999986    89999999999999998762   1 223456678888           899   9


Q ss_pred             eecCCCEEEEEeCCCCEEeC
Q psy10942        518 CSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       518 ~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+|++++|++++.||.|+||
T Consensus       270 ~sp~g~~las~~~D~~v~lw  289 (316)
T 3bg1_A          270 WSITANILAVSGGDNKVTLW  289 (316)
T ss_dssp             ECTTTCCEEEEESSSCEEEE
T ss_pred             EcCCCCEEEEEcCCCeEEEE
Confidence            99999999999999999998

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=2.1e-32  Score=265.64  Aligned_cols=266  Identities=23%  Similarity=0.408  Sum_probs=223.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..|.+++|  ++++|++|+.|+.|++||+.+           ++....+.+|...|.+++|.   ++.+++++.++.   
T Consensus       134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~-----------~~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~---  194 (435)
T 1p22_A          134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNT-----------LECKRILTGHTGSVLCLQYD---ERVIITGSSDST---  194 (435)
T ss_dssp             CCEEEEEC--CSSEEEEEESSSCEEEEESSS-----------CCEEEEECCCSSCEEEEECC---SSEEEEEETTSC---
T ss_pred             CcEEEEEE--CCCEEEEEeCCCeEEEEeCCC-----------CeEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCe---
Confidence            46777766  899999999999999999998           78889999999999999984   678888887777   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                       |                 ++||+       .+++..  +.     +|  ...|.++   +|++  .++++++.|+.++ 
T Consensus       195 -i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~l---~~~~--~~l~s~s~dg~i~-  236 (435)
T 1p22_A          195 -V-----------------RVWDV-------NTGEMLNTLI-----HH--CEAVLHL---RFNN--GMMVTCSKDRSIA-  236 (435)
T ss_dssp             -E-----------------EEEES-------SSCCEEEEEC-----CC--CSCEEEE---ECCT--TEEEEEETTSCEE-
T ss_pred             -E-----------------EEEEC-------CCCcEEEEEc-----CC--CCcEEEE---EEcC--CEEEEeeCCCcEE-
Confidence             9                 99999       877766  66     89  9999999   8864  4888888888888 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|++....                                           ... . ...+.+|...|.+++|  ++++
T Consensus       237 -vwd~~~~~-------------------------------------------~~~-~-~~~~~~~~~~v~~~~~--~~~~  268 (435)
T 1p22_A          237 -VWDMASPT-------------------------------------------DIT-L-RRVLVGHRAAVNVVDF--DDKY  268 (435)
T ss_dssp             -EEECSSSS-------------------------------------------CCE-E-EEEECCCSSCEEEEEE--ETTE
T ss_pred             -EEeCCCCC-------------------------------------------Cce-e-eeEecCCCCcEEEEEe--CCCE
Confidence             88776631                                           000 0 1234578889999999  6789


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++++.||.|++||+. ..+.+..+..|..                                                 .
T Consensus       269 l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~-------------------------------------------------~  298 (435)
T 1p22_A          269 IVSASGDRTIKVWNTS-TCEFVRTLNGHKR-------------------------------------------------G  298 (435)
T ss_dssp             EEEEETTSEEEEEETT-TCCEEEEEECCSS-------------------------------------------------C
T ss_pred             EEEEeCCCeEEEEECC-cCcEEEEEcCCCC-------------------------------------------------c
Confidence            9999999999999988 5555555554433                                                 5


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe-------
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST-------  487 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~-------  487 (537)
                      +.++++  +++++++|+.||.|++||+.+++++..+.+|...|.+++|  ++.+|++++.||.|++||+.+++       
T Consensus       299 v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~  374 (435)
T 1p22_A          299 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG  374 (435)
T ss_dssp             EEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred             EEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc
Confidence            666666  4679999999999999999999999999999999999999  78899999999999999997766       


Q ss_pred             --eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        488 --CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       488 --~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                        ++..+.+|...|           .++   +|  ++++|++++.||.|++|
T Consensus       375 ~~~~~~~~~h~~~v-----------~~l---~~--~~~~l~s~s~Dg~i~iw  410 (435)
T 1p22_A          375 TLCLRTLVEHSGRV-----------FRL---QF--DEFQIVSSSHDDTILIW  410 (435)
T ss_dssp             TTEEEEECCCSSCC-----------CCE---EE--CSSCEEECCSSSEEEEE
T ss_pred             chheeeccCCCCCe-----------EEE---Ee--CCCEEEEEeCCCEEEEE
Confidence              788999999999           888   88  88999999999999998

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.3e-32  Score=266.90  Aligned_cols=328  Identities=12%  Similarity=0.109  Sum_probs=225.4

Q ss_pred             eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----------hhhhcCCC-------------
Q psy10942         41 SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----------ELYQHGLS-------------   96 (537)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----------~~~~~~~~-------------   96 (537)
                      .+...+.+.++  .+.|        ++.+|++++.||.|++||+.+++           .+..+..|             
T Consensus        24 ~~~~~~~V~~v--~~s~--------~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~   93 (447)
T 3dw8_B           24 DVAEADIISTV--EFNH--------SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIE   93 (447)
T ss_dssp             CCCGGGSEEEE--EECS--------SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEEC
T ss_pred             cccccCcEEEE--EECC--------CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccccc
Confidence            34456777777  5688        67899999999999999999876           35555555             


Q ss_pred             cceEEEEEeccc--cEEEEEeCCceEEEEecccccCcccc--------------cc--------------cccceeEE-e
Q psy10942         97 SPLVRIVRSSVK--RMYAVVTADHNISLYRLNSETGLEER--------------PN--------------KILKFRKQ-F  145 (537)
Q Consensus        97 ~~v~~~~~s~~~--~~la~~~~d~~i~iwd~~~~~~~~~~--------------~~--------------~~~~~~~~-~  145 (537)
                      +.|.+++|+|++  .+|++++.|+.|++||+.++......              ..              ......+. .
T Consensus        94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (447)
T 3dw8_B           94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA  173 (447)
T ss_dssp             CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence            679999999998  78999999999999999873210000              00              00001112 3


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-----ccccccc
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-----KHNTERL  220 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-----l~~~~~~  220 (537)
                      .+|...|.+++|+ ++++.++++ .++.    |                 ++||+       ......     +....+.
T Consensus       174 ~~h~~~v~~~~~~-~~~~~l~s~-~d~~----i-----------------~iwd~-------~~~~~~~~~~~~~~~~~~  223 (447)
T 3dw8_B          174 NAHTYHINSISIN-SDYETYLSA-DDLR----I-----------------NLWHL-------EITDRSFNIVDIKPANME  223 (447)
T ss_dssp             SCCSSCCCEEEEC-TTSSEEEEE-CSSE----E-----------------EEEET-------TEEEEEEEEEECCCSSGG
T ss_pred             cCCCcceEEEEEc-CCCCEEEEe-CCCe----E-----------------EEEEC-------CCCCceeeeeeccccccc
Confidence            6799999999999 678888776 5555    9                 99999       532221     1112344


Q ss_pred             cCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      +|  ...|.++   +|+|++ ++|++++.|+.|+  +|++..+.....                            .+..
T Consensus       224 ~~--~~~v~~~---~~~p~~~~~l~s~~~dg~i~--iwd~~~~~~~~~----------------------------~~~~  268 (447)
T 3dw8_B          224 EL--TEVITAA---EFHPNSCNTFVYSSSKGTIR--LCDMRASALCDR----------------------------HSKL  268 (447)
T ss_dssp             GC--CCCEEEE---EECSSCTTEEEEEETTSCEE--EEETTTCSSSCT----------------------------TCEE
T ss_pred             cc--CcceEEE---EECCCCCcEEEEEeCCCeEE--EEECcCCccccc----------------------------eeeE
Confidence            89  9999999   999998 9999999999999  999987431100                            0112


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEE
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKL  379 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i  379 (537)
                      +........    ...+..|...|.+++|+|++++|++++. +.|++||++...+++..+..|..-              
T Consensus       269 ~~~~~~~~~----~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~--------------  329 (447)
T 3dw8_B          269 FEEPEDPSN----RSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL--------------  329 (447)
T ss_dssp             ECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG--------------
T ss_pred             eccCCCccc----cccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc--------------
Confidence            221111000    2234567789999999999999999998 999999998435555555444210              


Q ss_pred             EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-------
Q psy10942        380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-------  452 (537)
Q Consensus       380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------  452 (537)
                         .. .....+..  ..+              ..+..++|+|++++|++|+.||.|++||+.+++.+. +..       
T Consensus       330 ---~~-~l~~~~~~--~~i--------------~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~  388 (447)
T 3dw8_B          330 ---RS-KLCSLYEN--DCI--------------FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP  388 (447)
T ss_dssp             ---TT-THHHHHHT--SGG--------------GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred             ---cc-cccccccc--ccc--------------ccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence               00 00000000  000              023458999999999999999999999999877653 222       


Q ss_pred             --------------------------CCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        453 --------------------------HDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       453 --------------------------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                                                +...|..++|+|++++||+++.++ +++|..+
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred             ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence                                      235688999999999999998876 8888743

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.5e-31  Score=251.94  Aligned_cols=266  Identities=17%  Similarity=0.202  Sum_probs=200.0

Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL  173 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~  173 (537)
                      +.+.|.+++|+|++++||+++.|+.|++||+.++..       ..+....+.+|...|.+++|+|. ++.+|++++.++.
T Consensus        10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~   82 (351)
T 3f3f_A           10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-------NWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT   82 (351)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC-------CEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred             cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC-------cceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence            336899999999999999999999999999987311       12567788899999999999954 5788888887777


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---------cc--ccccccccCCCcCeEEEEeccCcccC--C
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---------QQ--KHNTERLGRDELKTVTLLERGKTVKE--E  240 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---------~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~  240 (537)
                          |                 ++||+       ..+.         ..  +.     +|  ...|.++   +|+|+  +
T Consensus        83 ----v-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~  124 (351)
T 3f3f_A           83 ----V-----------------KLWEE-------DPDQEECSGRRWNKLCTLN-----DS--KGSLYSV---KFAPAHLG  124 (351)
T ss_dssp             ----E-----------------EEEEE-------CTTSCTTSSCSEEEEEEEC-----CC--SSCEEEE---EECCGGGC
T ss_pred             ----E-----------------EEEec-------CCCcccccccCcceeeeec-----cc--CCceeEE---EEcCCCCC
Confidence                9                 99998       6542         12  45     89  9999999   99999  9


Q ss_pred             CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942        241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE  320 (537)
Q Consensus       241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~  320 (537)
                      ++|++++.|+.++  +|++........         +....              .+.            ........|.
T Consensus       125 ~~l~~~~~dg~v~--iwd~~~~~~~~~---------~~~~~--------------~~~------------~~~~~~~~~~  167 (351)
T 3f3f_A          125 LKLACLGNDGILR--LYDALEPSDLRS---------WTLTS--------------EMK------------VLSIPPANHL  167 (351)
T ss_dssp             SEEEEEETTCEEE--EEECSSTTCTTC---------CEEEE--------------EEE------------SCSCCCSSCS
T ss_pred             cEEEEecCCCcEE--EecCCChHHhcc---------ccccc--------------ccc------------ccccccCCcc
Confidence            9999999999999  999987432111         10000              000            0012234677


Q ss_pred             CCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCcee--eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        321 KDINCVTVSPN---DKLLASGSLDKTVKVWSTTGGLKL--LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       321 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      ..+.+++|+|+   +.++++++.|+.+.+|+.. ....  +..+.                                .|.
T Consensus       168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------------------------~h~  214 (351)
T 3f3f_A          168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVAAKLP--------------------------------GHK  214 (351)
T ss_dssp             CCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEEEECC--------------------------------CCC
T ss_pred             cceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeeeeecC--------------------------------CCC
Confidence            88999999997   8999999999999777765 3222  22222                                222


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCC----CEEEEEeCCCcEEEEECCC----------------------------
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLD----RILISSSGDATIKLWCLTD----------------------------  443 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~d~~~----------------------------  443 (537)
                      .                 .|.+++|+|++    ++|++++.||.|++||+..                            
T Consensus       215 ~-----------------~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (351)
T 3f3f_A          215 S-----------------LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQ  277 (351)
T ss_dssp             S-----------------CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------
T ss_pred             c-----------------ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccc
Confidence            2                 55666666665    5666777777777776654                            


Q ss_pred             ------------------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        444 ------------------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       444 ------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                                        .+.+..+.+|...|++++|+|++++|++++.||.|++|++.+++.+..+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~  344 (351)
T 3f3f_A          278 GRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM  344 (351)
T ss_dssp             -------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred             cccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence                              3778888999999999999999999999999999999999988655443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.3e-32  Score=263.45  Aligned_cols=269  Identities=19%  Similarity=0.348  Sum_probs=208.8

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      ++.++++++.||.|++||+.+++.+..+..| +.|.+++|  ++++|++|+.||.|++||+.+           ++.+..
T Consensus       142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~-----------~~~~~~  208 (435)
T 1p22_A          142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT-----------GEMLNT  208 (435)
T ss_dssp             CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS-----------CCEEEE
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC-----------CcEEEE
Confidence            5679999999999999999999998888866 68999988  788999999999999999999           688889


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDE  224 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~  224 (537)
                      +.+|...|.+++|+   ++.+++++.++.    |                 ++||+       .+.........+.+|  
T Consensus       209 ~~~h~~~v~~l~~~---~~~l~s~s~dg~----i-----------------~vwd~-------~~~~~~~~~~~~~~~--  255 (435)
T 1p22_A          209 LIHHCEAVLHLRFN---NGMMVTCSKDRS----I-----------------AVWDM-------ASPTDITLRRVLVGH--  255 (435)
T ss_dssp             ECCCCSCEEEEECC---TTEEEEEETTSC----E-----------------EEEEC-------SSSSCCEEEEEECCC--
T ss_pred             EcCCCCcEEEEEEc---CCEEEEeeCCCc----E-----------------EEEeC-------CCCCCceeeeEecCC--
Confidence            99999999999997   457788877766    9                 99998       665543111222388  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ...|.++   +|  +++++++++.|+.++  +|++..                                           
T Consensus       256 ~~~v~~~---~~--~~~~l~s~~~dg~i~--vwd~~~-------------------------------------------  285 (435)
T 1p22_A          256 RAAVNVV---DF--DDKYIVSASGDRTIK--VWNTST-------------------------------------------  285 (435)
T ss_dssp             SSCEEEE---EE--ETTEEEEEETTSEEE--EEETTT-------------------------------------------
T ss_pred             CCcEEEE---Ee--CCCEEEEEeCCCeEE--EEECCc-------------------------------------------
Confidence            8899999   66  666777766666666  666554                                           


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT  384 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  384 (537)
                      ++.     ...+..|...|.+++++  ++++++++.||.|++||++ ..+.+..+..|..                    
T Consensus       286 ~~~-----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~--------------------  337 (435)
T 1p22_A          286 CEF-----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEE--------------------  337 (435)
T ss_dssp             CCE-----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-TCCEEEEECCCSS--------------------
T ss_pred             CcE-----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECC-CCCEEEEEeCCcC--------------------
Confidence            322     22235678889999884  6789999999999999988 4444444444332                    


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce---------eeeEeecCCc
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV---------CLKSLEGHDA  455 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~  455 (537)
                                                   .+.+++|  ++++|++|+.||.|++||+.+++         ++..+.+|.+
T Consensus       338 -----------------------------~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~  386 (435)
T 1p22_A          338 -----------------------------LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG  386 (435)
T ss_dssp             -----------------------------CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred             -----------------------------cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence                                         6677777  67899999999999999998766         7888999999


Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       456 ~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      .|.+++|  ++++|++++.||.|++||+.+......
T Consensus       387 ~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~  420 (435)
T 1p22_A          387 RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA  420 (435)
T ss_dssp             CCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred             CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence            9999999  778999999999999999987765443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=7.5e-31  Score=247.15  Aligned_cols=248  Identities=17%  Similarity=0.202  Sum_probs=199.2

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      +|  ...|.++   +|+|++++|++++.||.|+  +|++.......                                  
T Consensus         9 gH--~~~v~~~---~~~~~~~~l~~~~~dg~i~--iw~~~~~~~~~----------------------------------   47 (351)
T 3f3f_A            9 GH--DDLVHDV---VYDFYGRHVATCSSDQHIK--VFKLDKDTSNW----------------------------------   47 (351)
T ss_dssp             CC--SSCEEEE---EECSSSSEEEEEETTSEEE--EEEECSSSCCE----------------------------------
T ss_pred             cc--ccceeEE---EEcCCCCEEEEeeCCCeEE--EEECCCCCCcc----------------------------------
Confidence            99  9999999   9999999999999999999  99887632110                                  


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCc--------ee----------eEEEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGL--------KL----------LNVLR  360 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~--------~~----------~~~~~  360 (537)
                               .. ...+.+|...|.+++|+|  ++++|++++.||.|++||+....        +.          +..+.
T Consensus        48 ---------~~-~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (351)
T 3f3f_A           48 ---------EL-SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVK  117 (351)
T ss_dssp             ---------EE-EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEE
T ss_pred             ---------ee-cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEE
Confidence                     00 233457889999999999  69999999999999999997431        22          34445


Q ss_pred             ecCC--CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCc
Q psy10942        361 GHKK--GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDAT  435 (537)
Q Consensus       361 ~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~  435 (537)
                      .+++  +.++++++.|+.|++||+++++.+..+.... .+..+.+.+.+.   ...+.+++|+|+   +.++++++.++.
T Consensus       118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~~l~~~~~~~~  193 (351)
T 3f3f_A          118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-EMKVLSIPPANH---LQSDFCLSWCPSRFSPEKLAVSALEQA  193 (351)
T ss_dssp             ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-EEESCSCCCSSC---SCCCEEEEECCCSSSCCEEEEEETTEE
T ss_pred             EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-cccccccccCCc---ccceeEEEeccCCCCCcEEEEecCCCc
Confidence            5566  8899999999999999999887665543211 111111122111   127889999997   899999999999


Q ss_pred             EEEEECCCcee--eeEeecCCcceEEEEEecCC----CEEEEEeCCCcEEEEECCCC-----------------------
Q psy10942        436 IKLWCLTDYVC--LKSLEGHDASVLRCHFINKG----TQIVSTGADGLLKLWSIKTS-----------------------  486 (537)
Q Consensus       436 i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~v~vwd~~~~-----------------------  486 (537)
                      +.+|+...++.  +..+.+|...|++++|+|++    ++|++++.||.|++||+.++                       
T Consensus       194 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (351)
T 3f3f_A          194 IIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVD  273 (351)
T ss_dssp             EEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------------
T ss_pred             EEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccc
Confidence            98888877654  77788899999999999998    89999999999999999775                       


Q ss_pred             -----------------------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        487 -----------------------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       487 -----------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                             +.+..+.+|...|           +++   +|+|++++|++++.||.|+||
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~---~~s~~~~~l~s~~~dg~v~iw  333 (351)
T 3f3f_A          274 MDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV-----------WSV---SWNLTGTILSSAGDDGKVRLW  333 (351)
T ss_dssp             -----------------CCSEEEEEEEEECTTSSCE-----------EEE---EECSSSCCEEEEETTSCEEEE
T ss_pred             cccccccccccceeeeecccccccEEEEEecccccE-----------EEE---EEcCCCCEEEEecCCCcEEEE
Confidence                                   6777888899999           999   999999999999999999998

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.98  E-value=2.9e-31  Score=249.37  Aligned_cols=285  Identities=16%  Similarity=0.110  Sum_probs=225.0

Q ss_pred             cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee----hhhhcCCCcceEEEEEecccc-EEEEEeCCc
Q psy10942         44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK----ELYQHGLSSPLVRIVRSSVKR-MYAVVTADH  118 (537)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~----~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~  118 (537)
                      +.+.+.++  .+.|        ++.++++++.|+.|++||+.+++    ......+...|.+++|+|+++ +|++++.|+
T Consensus        10 h~~~v~~~--~~s~--------~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg   79 (342)
T 1yfq_A           10 PKDYISDI--KIIP--------SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG   79 (342)
T ss_dssp             CSSCEEEE--EEEG--------GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred             CCCcEEEE--EEcC--------CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence            55677777  6688        66789999999999999998877    444445557999999999999 999999999


Q ss_pred             eEEEEec-ccccCcccccccccceeEEeec--chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhH
Q psy10942        119 NISLYRL-NSETGLEERPNKILKFRKQFVG--FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFD  195 (537)
Q Consensus       119 ~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  195 (537)
                      .|++||+ .+           .+ ...+.+  |...|.+++|+|  ++.+++++.++.    |                 
T Consensus        80 ~i~~wd~~~~-----------~~-~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~----i-----------------  124 (342)
T 1yfq_A           80 EILKVDLIGS-----------PS-FQALTNNEANLGICRICKYG--DDKLIAASWDGL----I-----------------  124 (342)
T ss_dssp             CEEEECSSSS-----------SS-EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE----E-----------------
T ss_pred             eEEEEEeccC-----------Cc-eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe----E-----------------
Confidence            9999999 77           33 367788  999999999994  788888887777    9                 


Q ss_pred             HHHHHHHHhhhccc---------cccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccC-CCc
Q psy10942        196 KTFERILEAKFKQS---------SSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKT-YHF  264 (537)
Q Consensus       196 ~~wd~~~~~~~~~~---------~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~-~~~  264 (537)
                      ++||+       .+         .+.. ..     .|  ...|.++   +|+|++  +++++.|+.++  +|++.. .. 
T Consensus       125 ~iwd~-------~~~~~~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~--l~~~~~d~~i~--i~d~~~~~~-  182 (342)
T 1yfq_A          125 EVIDP-------RNYGDGVIAVKNLNSNNT-----KV--KNKIFTM---DTNSSR--LIVGMNNSQVQ--WFRLPLCED-  182 (342)
T ss_dssp             EEECH-------HHHTTBCEEEEESCSSSS-----SS--CCCEEEE---EECSSE--EEEEESTTEEE--EEESSCCTT-
T ss_pred             EEEcc-------cccccccccccCCeeeEE-----ee--CCceEEE---EecCCc--EEEEeCCCeEE--EEECCcccc-
Confidence            99999       54         4444 22     47  7889999   888876  77777777777  777665 21 


Q ss_pred             ccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCc
Q psy10942        265 PLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKT  343 (537)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~  343 (537)
                                                                ...   ......|...|.+++|+| +++++++++.||.
T Consensus       183 ------------------------------------------~~~---~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~  217 (342)
T 1yfq_A          183 ------------------------------------------DNG---TIEESGLKYQIRDVALLPKEQEGYACSSIDGR  217 (342)
T ss_dssp             ------------------------------------------CCC---EEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred             ------------------------------------------ccc---eeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence                                                      000   111235677899999999 9999999999999


Q ss_pred             EEEEEccCC-----ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942        344 VKVWSTTGG-----LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV  418 (537)
Q Consensus       344 i~i~d~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~  418 (537)
                      |++|++...     .+....+..|....                 .      -..|..                 .+.++
T Consensus       218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~------~~~~~~-----------------~i~~~  257 (342)
T 1yfq_A          218 VAVEFFDDQGDDYNSSKRFAFRCHRLNL-----------------K------DTNLAY-----------------PVNSI  257 (342)
T ss_dssp             EEEEECCTTCCSTTCTTCEEEECCCCCT-----------------T------CCSSCC-----------------CEEEE
T ss_pred             EEEEEEcCCCcccccccceeeecccccc-----------------c------ccccce-----------------eEEEE
Confidence            999999843     25555555553210                 0      001111                 78899


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEEeCCCc-EEEEE
Q psy10942        419 NFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVSTGADGL-LKLWS  482 (537)
Q Consensus       419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~-v~vwd  482 (537)
                      +|+|++++|++++.||.|++||+.+++.+..+.+| ...|.+++  |++++|++++.||. .+.|.
T Consensus       258 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             EECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             EEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence            99999999999999999999999999999999998 99999999  99999999999998 55555

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.98  E-value=3.4e-30  Score=246.78  Aligned_cols=330  Identities=11%  Similarity=0.011  Sum_probs=240.8

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL   95 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~   95 (537)
                      +.++++++.|+.|++||+++++.+..++....+..+  .+.|.       +..++++++.++.|++||+.+++.+..+..
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~   72 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGA--VISPD-------GTKVYVANAHSNDVSIIDTATNNVIATVPA   72 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE--EECTT-------SSEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred             CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceE--EECCC-------CCEEEEECCCCCeEEEEECCCCeEEEEEEC
Confidence            356888999999999999999999988877777666  66884       434557777899999999999999999888


Q ss_pred             CcceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE-EEeeeccc
Q psy10942         96 SSPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI-VVASNEYL  173 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~~~~  173 (537)
                      +..+.+++|+|++++|++++ .++.|++||+.+           .+.+..+..+. .+.+++|+ ++++.+ ++++.++.
T Consensus        73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~-----------~~~~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~  139 (391)
T 1l0q_A           73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS-----------NTVAGTVKTGK-SPLGLALS-PDGKKLYVTNNGDKT  139 (391)
T ss_dssp             SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-----------TEEEEEEECSS-SEEEEEEC-TTSSEEEEEETTTTE
T ss_pred             CCCccceEECCCCCEEEEEECCCCEEEEEECCC-----------CeEEEEEeCCC-CcceEEEC-CCCCEEEEEeCCCCE
Confidence            88999999999999886555 569999999998           56676776554 57899999 677766 44444444


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCee-eeccCCC
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLF-PRQSMEP  250 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~  250 (537)
                          |                 ++||+       .+++..  +.     .+   ..+.++   +|+|+++++ ++++.++
T Consensus       140 ----v-----------------~~~d~-------~~~~~~~~~~-----~~---~~~~~~---~~~~dg~~l~~~~~~~~  180 (391)
T 1l0q_A          140 ----V-----------------SVINT-------VTKAVINTVS-----VG---RSPKGI---AVTPDGTKVYVANFDSM  180 (391)
T ss_dssp             ----E-----------------EEEET-------TTTEEEEEEE-----CC---SSEEEE---EECTTSSEEEEEETTTT
T ss_pred             ----E-----------------EEEEC-------CCCcEEEEEe-----cC---CCcceE---EECCCCCEEEEEeCCCC
Confidence                8                 99998       776665  43     34   456888   999999877 4566667


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .++  +||+..                                           ++....      ..+...+.+++|+|
T Consensus       181 ~v~--~~d~~~-------------------------------------------~~~~~~------~~~~~~~~~~~~~~  209 (391)
T 1l0q_A          181 SIS--VIDTVT-------------------------------------------NSVIDT------VKVEAAPSGIAVNP  209 (391)
T ss_dssp             EEE--EEETTT-------------------------------------------TEEEEE------EECSSEEEEEEECT
T ss_pred             EEE--EEECCC-------------------------------------------CeEEEE------EecCCCccceEECC
Confidence            777  776655                                           221111      11334678999999


Q ss_pred             CCCEEEEEe---CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        331 NDKLLASGS---LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       331 ~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      +++++++++   .++.|++||+. ..+.+..+..+.                                            
T Consensus       210 ~g~~l~~~~~~~~~~~v~~~d~~-~~~~~~~~~~~~--------------------------------------------  244 (391)
T 1l0q_A          210 EGTKAYVTNVDKYFNTVSMIDTG-TNKITARIPVGP--------------------------------------------  244 (391)
T ss_dssp             TSSEEEEEEECSSCCEEEEEETT-TTEEEEEEECCS--------------------------------------------
T ss_pred             CCCEEEEEecCcCCCcEEEEECC-CCeEEEEEecCC--------------------------------------------
Confidence            999999887   67888888887 444444333221                                            


Q ss_pred             CceEEeeeeEEEEcCCCCEE-EEEeCCCcEEEEECCCceeeeEeecCCcceE---EEE------------EecCC-----
Q psy10942        408 NQIITGGVWFVNFSPLDRIL-ISSSGDATIKLWCLTDYVCLKSLEGHDASVL---RCH------------FINKG-----  466 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~---~~~------------~s~~~-----  466 (537)
                            .+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..|..+..   .+.            |+.+.     
T Consensus       245 ------~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~  318 (391)
T 1l0q_A          245 ------DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYI  318 (391)
T ss_dssp             ------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEE
T ss_pred             ------CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccc
Confidence                  45678999999877 5667899999999999999988877655421   122            32221     


Q ss_pred             -----CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        467 -----TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       467 -----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                           ..+...+.|..+++|++.+|...    .+..             ...   .|+++|.+.++.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~-------------~~~---~~~~~g~y~~~~  365 (391)
T 1l0q_A          319 FLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQN-------------PTH---TYSETGIYTVRL  365 (391)
T ss_dssp             ETTCCEEEEECCBSCSEEEEECSSSCEE----CSSS-------------CEE---CCSSCEEEEEEE
T ss_pred             cccceEEEEeCCCCceEEEEECCCCccc----CcCC-------------CeE---EeCCCceEEEEE
Confidence                 23555566888999999887642    1111             123   788888887754

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.98  E-value=4e-30  Score=246.27  Aligned_cols=278  Identities=9%  Similarity=0.014  Sum_probs=217.5

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEE-EEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMY-AVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      .++++++.++.|++||+.+++.+..+..+..+.+++|+|++++| ++++.|+.|++||+.+           ++....+.
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~-----------~~~~~~~~   71 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT-----------NNVIATVP   71 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT-----------TEEEEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC-----------CeEEEEEE
Confidence            57888899999999999999999999888899999999999987 5666899999999998           67777777


Q ss_pred             cchhhhhhhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC
Q psy10942        147 GFSDEILDIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE  224 (537)
Q Consensus       147 ~~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~  224 (537)
                      .+. .+.+++|+ +++++++++. .++.    |                 ++||+       .+++.. ..     .+  
T Consensus        72 ~~~-~v~~~~~s-pdg~~l~~~~~~~~~----v-----------------~v~d~-------~~~~~~~~~-----~~--  114 (391)
T 1l0q_A           72 AGS-SPQGVAVS-PDGKQVYVTNMASST----L-----------------SVIDT-------TSNTVAGTV-----KT--  114 (391)
T ss_dssp             CSS-SEEEEEEC-TTSSEEEEEETTTTE----E-----------------EEEET-------TTTEEEEEE-----EC--
T ss_pred             CCC-CccceEEC-CCCCEEEEEECCCCE----E-----------------EEEEC-------CCCeEEEEE-----eC--
Confidence            666 79999999 6777775544 3344    8                 99999       777666 22     33  


Q ss_pred             cCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        225 LKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                      ...+.++   +|+|+++++ ++++.++.++  +|++..                                          
T Consensus       115 ~~~~~~~---~~s~dg~~l~~~~~~~~~v~--~~d~~~------------------------------------------  147 (391)
T 1l0q_A          115 GKSPLGL---ALSPDGKKLYVTNNGDKTVS--VINTVT------------------------------------------  147 (391)
T ss_dssp             SSSEEEE---EECTTSSEEEEEETTTTEEE--EEETTT------------------------------------------
T ss_pred             CCCcceE---EECCCCCEEEEEeCCCCEEE--EEECCC------------------------------------------
Confidence            4568899   999999877 5666677777  776655                                          


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                       ++...     .+.. ...+.+++|+|+++.+ ++++.++.|++||+. ..+....+..+ .                  
T Consensus       148 -~~~~~-----~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~~~~-~------------------  200 (391)
T 1l0q_A          148 -KAVIN-----TVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTV-TNSVIDTVKVE-A------------------  200 (391)
T ss_dssp             -TEEEE-----EEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECS-S------------------
T ss_pred             -CcEEE-----EEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCeEEEEEecC-C------------------
Confidence             22111     1111 2346899999999887 566778899999988 44433333211 1                  


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe---CCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS---GDATIKLWCLTDYVCLKSLEGHDASVLR  459 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~v~~  459 (537)
                                                     .+.+++|+|++++|++++   .++.|++||+.+++.+..+..|. .+.+
T Consensus       201 -------------------------------~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~  248 (391)
T 1l0q_A          201 -------------------------------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAG  248 (391)
T ss_dssp             -------------------------------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEE
T ss_pred             -------------------------------CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccE
Confidence                                           677889999999999888   68999999999999998888765 4789


Q ss_pred             EEEecCCCEE-EEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        460 CHFINKGTQI-VSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       460 ~~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      ++|+|++++| ++++.|+.|++||+.+++.+..+..|..+.
T Consensus       249 ~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~  289 (391)
T 1l0q_A          249 IAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPY  289 (391)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE
T ss_pred             EEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCC
Confidence            9999999987 566889999999999999999998776553

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.98  E-value=1.8e-31  Score=254.55  Aligned_cols=258  Identities=17%  Similarity=0.203  Sum_probs=199.5

Q ss_pred             ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccE
Q psy10942         88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHI  165 (537)
Q Consensus        88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l  165 (537)
                      +.+..+..| +.|.+++|+|++++||+++.|+.|++||+....         .+....+.+|...|.+++|+++ ++.+|
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~~l   72 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTIL   72 (379)
T ss_dssp             ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---------EEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred             CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc---------ceeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence            344455544 689999999999999999999999999998311         5777889999999999999844 27788


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCcccC--
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVKE--  239 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--  239 (537)
                      ++++.++.    |                 ++||+       .+++  ..  +.     +|  ...|.++   +|+|+  
T Consensus        73 ~s~~~dg~----v-----------------~iwd~-------~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~  114 (379)
T 3jrp_A           73 ASCSYDGK----V-----------------LIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEY  114 (379)
T ss_dssp             EEEETTSC----E-----------------EEEEE-------ETTEEEEEEEEC-----CC--SSCEEEE---EECCGGG
T ss_pred             EEeccCCE----E-----------------EEEEc-------CCCceeEeeeec-----CC--CcceEEE---EeCCCCC
Confidence            88887776    9                 99999       7665  22  55     78  9999999   99999  


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                      +++|++++.|+.++  +|++......                                         .     ...+..|
T Consensus       115 ~~~l~~~~~d~~i~--v~d~~~~~~~-----------------------------------------~-----~~~~~~~  146 (379)
T 3jrp_A          115 GPLLLVASSDGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAH  146 (379)
T ss_dssp             CSEEEEEETTSEEE--EEECCTTSCC-----------------------------------------C-----EEEEECC
T ss_pred             CCEEEEecCCCcEE--EEecCCCCce-----------------------------------------e-----eEEecCC
Confidence            88999988888888  8887763100                                         0     1123467


Q ss_pred             CCCeEEEEEcC-------------CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        320 EKDINCVTVSP-------------NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       320 ~~~v~~~~~s~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      ...|.+++|+|             ++++|++++.|+.|++||++......                             .
T Consensus       147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----------------------------~  197 (379)
T 3jrp_A          147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------V  197 (379)
T ss_dssp             TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE-----------------------------E
T ss_pred             CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce-----------------------------e
Confidence            88899999999             68888888888888888887322111                             1


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCcEEEEECCCce-----eeeEeecCCcceE
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDATIKLWCLTDYV-----CLKSLEGHDASVL  458 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~  458 (537)
                      ....+..|..                 .|.+++|+|+   +++|++++.||.|++||+.+++     .+.....|...|.
T Consensus       198 ~~~~~~~h~~-----------------~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  260 (379)
T 3jrp_A          198 LESTLEGHSD-----------------WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW  260 (379)
T ss_dssp             EEEEECCCSS-----------------CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEE
T ss_pred             eEEEEecccC-----------------cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEE
Confidence            1122233333                 7888999999   8999999999999999998853     2333344888999


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        459 RCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      +++|+|++++|++++.||.|++|++..+
T Consensus       261 ~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          261 RASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             EEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             EEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            9999999999999999999999998743

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.98  E-value=5.2e-30  Score=249.05  Aligned_cols=300  Identities=13%  Similarity=0.080  Sum_probs=225.3

Q ss_pred             EEEeCccc--eEEeeeccce--ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeE--
Q psy10942         70 VLAGGEKS--LLHYYETSAV--KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK--  143 (537)
Q Consensus        70 ~~~~~~~~--~i~~wd~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--  143 (537)
                      .+.++.++  .|..+|..++  +.+..+..+..+.+++|+|++.++++++.++.|++||+.+           ++...  
T Consensus        92 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~  160 (433)
T 3bws_A           92 RIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINS-----------GQTVRLS  160 (433)
T ss_dssp             EESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTT-----------CCEEEEC
T ss_pred             eecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCC-----------CeEeeec
Confidence            33455666  4555555434  5666676677788999999888888888889999999998           45554  


Q ss_pred             ---EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc
Q psy10942        144 ---QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE  218 (537)
Q Consensus       144 ---~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~  218 (537)
                         .+.+|...|.+++|+ +++..+++++.++.    |                 ++||+       .+++..  +.   
T Consensus       161 ~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~----v-----------------~~~d~-------~~~~~~~~~~---  208 (433)
T 3bws_A          161 PPEKYKKKLGFVETISIP-EHNELWVSQMQANA----V-----------------HVFDL-------KTLAYKATVD---  208 (433)
T ss_dssp             CCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTE----E-----------------EEEET-------TTCCEEEEEE---
T ss_pred             CcccccccCCceeEEEEc-CCCEEEEEECCCCE----E-----------------EEEEC-------CCceEEEEEc---
Confidence               345778889999997 77777777776666    9                 99999       776655  55   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                        .|  ...+.++   +|+|++++++ +++.++.|+  +|++..                                    
T Consensus       209 --~~--~~~~~~~---~~~~~~~~l~~~~~~~~~i~--~~d~~~------------------------------------  243 (433)
T 3bws_A          209 --LT--GKWSKIL---LYDPIRDLVYCSNWISEDIS--VIDRKT------------------------------------  243 (433)
T ss_dssp             --CS--SSSEEEE---EEETTTTEEEEEETTTTEEE--EEETTT------------------------------------
T ss_pred             --CC--CCCeeEE---EEcCCCCEEEEEecCCCcEE--EEECCC------------------------------------
Confidence              78  8899999   9999998774 444667777  776654                                    


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe--------CCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS--------LDKTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                             ++...     .+. +...+.+++|+|+++.+++++        .|+.|++||+. ..+.+..+.         
T Consensus       244 -------~~~~~-----~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~~~~---------  300 (433)
T 3bws_A          244 -------KLEIR-----KTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD-KEKLIDTIG---------  300 (433)
T ss_dssp             -------TEEEE-----ECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT-TTEEEEEEE---------
T ss_pred             -------CcEEE-----Eec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC-CCcEEeecc---------
Confidence                   22111     111 123488999999999999887        35666666665 333222211         


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE-EEEeCCCcEEEEECCCceeee
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL-ISSSGDATIKLWCLTDYVCLK  448 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~  448 (537)
                                              +.                 +.+..++|+|+++.+ ++++.++.|++||+.+++.+.
T Consensus       301 ------------------------~~-----------------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~  339 (433)
T 3bws_A          301 ------------------------PP-----------------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK  339 (433)
T ss_dssp             ------------------------EE-----------------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             ------------------------CC-----------------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence                                    00                 156778999999755 566889999999999999888


Q ss_pred             EeecCCcceEEEEEecCCCEEEEEeC---------------CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        449 SLEGHDASVLRCHFINKGTQIVSTGA---------------DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       449 ~~~~~~~~v~~~~~s~~~~~l~s~~~---------------dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      .+. +...+.+++|+|++++|++++.               ||.|++||+.+++.+..+..+ ..+           .++
T Consensus       340 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~-----------~~~  406 (433)
T 3bws_A          340 SIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQP-----------TGL  406 (433)
T ss_dssp             EEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSE-----------EEE
T ss_pred             Eec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCC-----------ceE
Confidence            887 6778999999999999998876               579999999999999888764 356           788


Q ss_pred             cceeeecCCCEEEEEeC-CCCEEeC
Q psy10942        514 PRQLCSRNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~~~-dg~i~vW  537 (537)
                         +|+|+|++|++++. |+.|++|
T Consensus       407 ---~~s~dg~~l~~~~~~d~~i~v~  428 (433)
T 3bws_A          407 ---DVSPDNRYLVISDFLDHQIRVY  428 (433)
T ss_dssp             ---EECTTSCEEEEEETTTTEEEEE
T ss_pred             ---EEcCCCCEEEEEECCCCeEEEE
Confidence               99999999998875 9999998

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.98  E-value=7.9e-30  Score=239.90  Aligned_cols=276  Identities=10%  Similarity=0.086  Sum_probs=192.4

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      +|  ...|.++   +|+|||++|++|+.++ ++  +|+............ ............. ..+++++.|++|++|
T Consensus        17 ~h--~~~V~~v---~fs~dg~~la~g~~~~-~~--iw~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~d~~v~iW   86 (355)
T 3vu4_A           17 HV--SNPVTDY---EFNQDQSCLILSTLKS-FE--IYNVHPVAHIMSQEM-RHLSKVRMLHRTN-YVAFVTGVKEVVHIW   86 (355)
T ss_dssp             ----CCCCCEE---EECTTSSEEEEECSSE-EE--EEEETTEEEEEEEEC-SCCCEEEECTTSS-EEEEECSSTTEEEEE
T ss_pred             cC--CCceEEE---EECCCCCEEEEEcCCE-EE--EEecCCcceeeeeec-CCeEEEEEcCCCC-EEEEEECCccEEEEE
Confidence            89  9999999   9999999999998775 78  999876422111100 0011111111111 344678888999999


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-------ecCCCCEEEE--E
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-------GHKKGTQIVS--T  371 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~l~~--~  371 (537)
                      |..+++....+      .+...|.+++++++.  ++++ .|+.|++||+....+.+..+.       ..+  ..++.  +
T Consensus        87 d~~~~~~~~~~------~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg  155 (355)
T 3vu4_A           87 DDVKKQDVSRI------KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNE  155 (355)
T ss_dssp             ETTTTEEEEEE------ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEES
T ss_pred             ECCCCcEEEEE------ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCC
Confidence            99998764432      356789999999764  4443 478999999984413222221       122  45555  5


Q ss_pred             cCCCcEEEEECCCCee----------------eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942        372 GADGLLKLWSIKTSTC----------------VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT  435 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  435 (537)
                      +.+|.|++||+.+++.                +..+.+|..                 .|.+++|+|++++|++|+.|++
T Consensus       156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~-----------------~v~~~~~s~~g~~l~s~s~d~~  218 (355)
T 3vu4_A          156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN-----------------PIKMVRLNRKSDMVATCSQDGT  218 (355)
T ss_dssp             SCTTCEEEEECCC------------------CCEEECCCSS-----------------CEEEEEECTTSSEEEEEETTCS
T ss_pred             CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC-----------------ceEEEEECCCCCEEEEEeCCCC
Confidence            8899999999998751                455666655                 7889999999999999999998


Q ss_pred             -EEEEECCCceeeeEee-c-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE--EEecC-----Ccccee---c-
Q psy10942        436 -IKLWCLTDYVCLKSLE-G-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV--STFDK-----HALKIR---N-  501 (537)
Q Consensus       436 -i~i~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~--~~~~~-----~~~~i~---~-  501 (537)
                       |++||+.+++++..+. + |...|++++|+|++++|++++.|++|++||++.+...  ..+..     +.....   . 
T Consensus       219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (355)
T 3vu4_A          219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF  298 (355)
T ss_dssp             EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred             EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence             9999999999999998 5 9999999999999999999999999999999765321  11111     000000   0 


Q ss_pred             -cCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        502 -SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       502 -~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                       ...........+   +|++|+++|++++.||.+++|
T Consensus       299 ~~~~~~~~~~~~~---a~~~d~~~l~~~~~dg~~~~~  332 (355)
T 3vu4_A          299 KLSVDKHVRGCKI---AWISESSLVVVWPHTRMIETF  332 (355)
T ss_dssp             ECCCCTTCCCCEE---EESSSSEEEEEETTTTEEEEE
T ss_pred             EeccCCCCCceEE---EEeCCCCEEEEEeCCCeEEEE
Confidence             000011111445   999999999999999999886

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.98  E-value=1e-29  Score=272.79  Aligned_cols=424  Identities=8%  Similarity=-0.031  Sum_probs=289.7

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc------cce
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE------KSL   78 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~   78 (537)
                      +.+.+||  ++  .|+.++. +.|.+|+++.++......+...+..+  .++|        ++++|+.++.      +..
T Consensus        17 ~~~~~~S--~~--~iaf~~~-~~l~~~~~~gg~~~~lt~~~~~v~~~--~~SP--------DG~~la~~s~~~~~~~~~~   81 (1045)
T 1k32_A           17 LLNPDIH--GD--RIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNA--RFFP--------DGRKIAIRVMRGSSLNTAD   81 (1045)
T ss_dssp             CEEEEEE--TT--EEEEEET-TEEEEEETTTCCEEEEECSSSEEEEE--EECT--------TSSEEEEEEEESTTCCEEE
T ss_pred             EeCcEEe--CC--EEEEEEC-CcEEEEECCCCcEEEeeeCCCcccCe--EECC--------CCCEEEEEEeeccCCCCCe
Confidence            5677888  43  5666654 57999999988766555555566666  6688        6677776643      357


Q ss_pred             EEeeeccceehhhhcCCC-cce-------EEEEEeccccEEEEEeCC------ceEEEEecccccCcccccccccceeEE
Q psy10942         79 LHYYETSAVKELYQHGLS-SPL-------VRIVRSSVKRMYAVVTAD------HNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~-~~v-------~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      |++||+.+++. ..+..+ ..+       ..++|||||+.+++++.+      ..|.+|++.+           ++. ..
T Consensus        82 i~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~-----------g~~-~~  148 (1045)
T 1k32_A           82 LYFYNGENGEI-KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDG-----------INF-VP  148 (1045)
T ss_dssp             EEEEETTTTEE-EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGG-----------TEE-EE
T ss_pred             EEEEECCCCCe-EEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCC-----------CCe-EE
Confidence            99999988774 445544 466       899999999977776644      3577777776           333 33


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeecccc--------CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cc
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLN--------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KH  215 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~  215 (537)
                      +..+.  ...++|+|  + .++++..+...        ....                 ++|..      ...++.. +.
T Consensus       149 l~~~~--~~~~~~sp--G-~l~~~~~~~~~~~~~~~~g~~~~-----------------~lw~~------~~~~~~~~l~  200 (1045)
T 1k32_A          149 LNLGP--ATHILFAD--G-RRVIGRNTFELPHWKGYRGGTRG-----------------KIWIE------VNSGAFKKIV  200 (1045)
T ss_dssp             CCSCS--CSEEEEET--T-EEEEEESCSCCTTSTTCCSTTCC-----------------EEEEE------EETTEEEEEE
T ss_pred             ecCCC--cceeeeCC--C-EEEEeccCCCccccccccCCCcC-----------------CEEEE------CCCCCeEECc
Confidence            33332  34567994  5 55554432220        0012                 33432      0112222 55


Q ss_pred             ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-ccccceeeeeeCCcceEEEEEeCC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-VPEAEHGAFYTGGTVELLASGSLD  294 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~d  294 (537)
                           +|  ...+.++   .|+++ .++++++.++.+.  +|.+........... ...........++  +.++.+ .+
T Consensus       201 -----~~--~~~v~~~---~~s~d-~l~~~~~~dg~~~--l~~~~~~g~~~~~l~~~~~~~~~~~SpDG--~~la~~-~~  264 (1045)
T 1k32_A          201 -----DM--STHVSSP---VIVGH-RIYFITDIDGFGQ--IYSTDLDGKDLRKHTSFTDYYPRHLNTDG--RRILFS-KG  264 (1045)
T ss_dssp             -----CC--SSCCEEE---EEETT-EEEEEECTTSSCE--EEEEETTSCSCEECCCCCSSCEEEEEESS--SCEEEE-ET
T ss_pred             -----CC--CCcccce---EEeCC-EEEEEEeccCceE--EEEEeCCCCcceEecCCCCcceeeEcCCC--CEEEEE-eC
Confidence                 89  9999999   99988 6777788889999  998764222111100 0001111122222  345555 48


Q ss_pred             CeEEEEECCCCceeeeeecc-------cccccCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEccCCce---------eeE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRG-------HKKGHEKDINCVTVS-PNDKLLASGSLDKTVKVWSTTGGLK---------LLN  357 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~  357 (537)
                      +.|++|++..... ..+ ..       ....|...+.+++|+ |||+.|++++ ++.+++|++.....         .+.
T Consensus       265 ~~i~~~d~~~~~l-~~l-~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~  341 (1045)
T 1k32_A          265 GSIYIFNPDTEKI-EKI-EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYV  341 (1045)
T ss_dssp             TEEEEECTTTCCE-EEC-CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEE
T ss_pred             CEEEEecCCceEe-eee-ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEE
Confidence            9999999854332 111 11       001244568999999 9999999887 78899999873211         233


Q ss_pred             EEEecCCCCEEEEEcCCCcEE-EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        358 VLRGHKKGTQIVSTGADGLLK-LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       358 ~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                      ....+ ++..++.++.++.+. +||+.+++..... .+..                 .+..++|+|||++|++++.++.|
T Consensus       342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~-----------------~~~~~~~SpDG~~la~~~~~~~v  402 (1045)
T 1k32_A          342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLG-----------------NVFAMGVDRNGKFAVVANDRFEI  402 (1045)
T ss_dssp             EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCC-----------------SEEEEEECTTSSEEEEEETTSEE
T ss_pred             eeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCcc-----------------ceeeeEECCCCCEEEEECCCCeE
Confidence            34455 677888888888888 8999877644332 3332                 67889999999999999999999


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC----------cEEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG----------LLKLWSIKTSTCVSTFDKHALKIRNSDSEN  506 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~  506 (537)
                      ++||+.+++....+.+|...+.+++|||||++|++++.++          .|++||+.+++ ...+..|...+       
T Consensus       403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~-------  474 (1045)
T 1k32_A          403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD-------  474 (1045)
T ss_dssp             EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE-------
T ss_pred             EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCccc-------
Confidence            9999999988888878999999999999999999887654          89999999887 67777787777       


Q ss_pred             CCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        507 DHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       507 ~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                          ..+   +|+|||++|++++.++..++|
T Consensus       475 ----~~~---~~spdG~~l~~~s~~~~~~~~  498 (1045)
T 1k32_A          475 ----YAP---AFDADSKNLYYLSYRSLDPSP  498 (1045)
T ss_dssp             ----EEE---EECTTSCEEEEEESCCCCCEE
T ss_pred             ----CCc---eEcCCCCEEEEEecccCCcCc
Confidence                778   999999999999887665443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=1.4e-31  Score=257.17  Aligned_cols=282  Identities=12%  Similarity=0.141  Sum_probs=212.2

Q ss_pred             CcEEEEEeCccceEEeeeccce-e---hhhhcCCC-cceEEEEEec-cccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAV-K---ELYQHGLS-SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKIL  139 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~-~---~~~~~~~~-~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~  139 (537)
                      ...++++++.+|.|++|++.+. +   .+..+..| +.|.+++|+| ++++||+++.|+.|++||+.++...    ....
T Consensus        46 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~----~~~~  121 (402)
T 2aq5_A           46 FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV----LPLR  121 (402)
T ss_dssp             EEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS----SCBC
T ss_pred             eEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc----cccC
Confidence            3345556788999999998654 3   23344444 6999999999 9999999999999999999883110    0011


Q ss_pred             ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--c--c
Q psy10942        140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--K--H  215 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l--~  215 (537)
                      +.+..+.+|...|.+++|+|.+...+++++.++.    |                 ++||+       .+++..  +  .
T Consensus       122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~----i-----------------~iwd~-------~~~~~~~~~~~~  173 (402)
T 2aq5_A          122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV----I-----------------LVWDV-------GTGAAVLTLGPD  173 (402)
T ss_dssp             SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC----E-----------------EEEET-------TTTEEEEEECTT
T ss_pred             CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE----E-----------------EEEEC-------CCCCccEEEecC
Confidence            5677899999999999999433367888777766    9                 99999       777665  4  5


Q ss_pred             ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                           +|  ...|.++   +|+|++++|++++.|+.++  +|++..+                                 
T Consensus       174 -----~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~---------------------------------  208 (402)
T 2aq5_A          174 -----VH--PDTIYSV---DWSRDGALICTSCRDKRVR--VIEPRKG---------------------------------  208 (402)
T ss_dssp             -----TC--CSCEEEE---EECTTSSCEEEEETTSEEE--EEETTTT---------------------------------
T ss_pred             -----CC--CCceEEE---EECCCCCEEEEEecCCcEE--EEeCCCC---------------------------------
Confidence                 89  9999999   9999999999999888888  8887662                                 


Q ss_pred             eEEEEECCCCceeeeeecccc-cccCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEEccCCceeeEEEEecCCCCEEEE
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHK-KGHEKD-INCVTVSPNDKLLASG---SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVS  370 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~  370 (537)
                                +.     ...+ ..|.+. +.++.|+|++++|+++   +.|+.|++||+.....++......        
T Consensus       209 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--------  265 (402)
T 2aq5_A          209 ----------TV-----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD--------  265 (402)
T ss_dssp             ----------EE-----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC--------
T ss_pred             ----------ce-----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc--------
Confidence                      11     0111 234443 7899999999999999   789999999998433322222211        


Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE-EeCCCcEEEEECCCcee-ee
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS-SSGDATIKLWCLTDYVC-LK  448 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~-~~  448 (537)
                                             +..                 .+.+++|+|++++|++ ++.||.|++||+.++++ +.
T Consensus       266 -----------------------~~~-----------------~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~  305 (402)
T 2aq5_A          266 -----------------------TSS-----------------GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLH  305 (402)
T ss_dssp             -----------------------CCS-----------------SCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEE
T ss_pred             -----------------------CCC-----------------ceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceE
Confidence                                   111                 6788999999999875 55799999999998774 44


Q ss_pred             Eeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        449 SLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       449 ~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      .+..  |...|.+++|+|++.++++  .++.+++|++.+++..
T Consensus       306 ~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~  346 (402)
T 2aq5_A          306 YLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE  346 (402)
T ss_dssp             EEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred             eecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence            5544  4588999999999988775  5669999999887543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=1.2e-30  Score=252.58  Aligned_cols=296  Identities=16%  Similarity=0.165  Sum_probs=222.6

Q ss_pred             ceEEEEEeccc----------cEEEEEeC----CceEEEEecccccC--c-----------cc---ccccccceeEEeec
Q psy10942         98 PLVRIVRSSVK----------RMYAVVTA----DHNISLYRLNSETG--L-----------EE---RPNKILKFRKQFVG  147 (537)
Q Consensus        98 ~v~~~~~s~~~----------~~la~~~~----d~~i~iwd~~~~~~--~-----------~~---~~~~~~~~~~~~~~  147 (537)
                      +..++.|.|+.          .++++|+.    .+.|.++++.-...  .           +.   ....+.-.......
T Consensus        47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  126 (430)
T 2xyi_A           47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN  126 (430)
T ss_dssp             CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred             CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence            56777777764          46777765    35677776541000  0           00   00111112345667


Q ss_pred             chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc----------cccc--cc
Q psy10942        148 FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS----------SSQQ--KH  215 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~----------~~~~--l~  215 (537)
                      |.+.|.+++|+|.++..+++++.++.    |                 ++|++       ..          ....  +.
T Consensus       127 h~~~v~~l~~~p~~~~~lat~~~dg~----V-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~~  178 (430)
T 2xyi_A          127 HEGEVNRARYMPQNACVIATKTPSSD----V-----------------LVFDY-------TKHPSKPEPSGECQPDLRLR  178 (430)
T ss_dssp             ESSCCSEEEEETTEEEEEEEECSSSC----E-----------------EEEEG-------GGSCSSCCTTCCCCCSEEEE
T ss_pred             CCCcEEEEEECCCCCcEEEEECCCCc----E-----------------EEEEC-------CCcccccCccccCCCcEEec
Confidence            99999999999544667777776666    9                 99998       43          2222  55


Q ss_pred             ccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD  294 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d  294 (537)
                           +|  ...|.++   +|+|++. +|++++.||.|+  +|++........                           
T Consensus       179 -----~h--~~~v~~l---~~~~~~~~~l~s~~~dg~i~--vwd~~~~~~~~~---------------------------  219 (430)
T 2xyi_A          179 -----GH--QKEGYGL---SWNPNLNGYLLSASDDHTIC--LWDINATPKEHR---------------------------  219 (430)
T ss_dssp             -----CC--SSCCCCE---EECTTSTTEEEEECTTSCEE--EEETTSCCBGGG---------------------------
T ss_pred             -----CC--CCCeEEE---EeCCCCCCeEEEEeCCCeEE--EEeCCCCCCCCc---------------------------
Confidence                 89  9999999   9999988 999999999999  999887321100                           


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCc--eeeEEEEecCCCCEEEEE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGL--KLLNVLRGHKKGTQIVST  371 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~l~~~  371 (537)
                       .+   .         . ...+..|...|.+++|+| ++.+|++++.|+.|++||++...  +.+..+..|..       
T Consensus       220 -~~---~---------~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------  278 (430)
T 2xyi_A          220 -VI---D---------A-KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA-------  278 (430)
T ss_dssp             -EE---E---------C-SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS-------
T ss_pred             -ee---c---------c-ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC-------
Confidence             00   0         0 223457888999999999 77899999999999999998331  23333333322       


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCC-ceeeeE
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTD-YVCLKS  449 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~  449 (537)
                                                                .+.+++|+|+++ ++++|+.||.|++||+++ .+++..
T Consensus       279 ------------------------------------------~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~  316 (430)
T 2xyi_A          279 ------------------------------------------EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS  316 (430)
T ss_dssp             ------------------------------------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred             ------------------------------------------CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence                                                      788899999886 789999999999999998 577889


Q ss_pred             eecCCcceEEEEEecCCC-EEEEEeCCCcEEEEECCC--------------CeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        450 LEGHDASVLRCHFINKGT-QIVSTGADGLLKLWSIKT--------------STCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       450 ~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~vwd~~~--------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                      +..|...|.+++|+|+++ +|++++.|+.|++||+..              .+++..+.+|...|           .++ 
T Consensus       317 ~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~-  384 (430)
T 2xyi_A          317 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI-----------SDF-  384 (430)
T ss_dssp             EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE-----------EEE-
T ss_pred             eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc-----------eEE-
Confidence            999999999999999985 799999999999999976              36777888899889           999 


Q ss_pred             ceeeecCCC-EEEEEeCCCCEEeC
Q psy10942        515 RQLCSRNSD-CEYRGGWSPQVVVY  537 (537)
Q Consensus       515 ~~~~s~~~~-~l~s~~~dg~i~vW  537 (537)
                        +|+|+++ +|++++.||.|+||
T Consensus       385 --~~~p~~~~~l~s~s~dg~i~iw  406 (430)
T 2xyi_A          385 --SWNPNEPWIICSVSEDNIMQVW  406 (430)
T ss_dssp             --EECSSSTTEEEEEETTSEEEEE
T ss_pred             --EECCCCCCEEEEEECCCCEEEe
Confidence              9999999 89999999999998

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=8.9e-30  Score=247.41  Aligned_cols=308  Identities=8%  Similarity=0.029  Sum_probs=228.3

Q ss_pred             cCcc--eEEEEEcCcc--ceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh-----c
Q psy10942         23 GRDK--VLFTWDLSSR--KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ-----H   93 (537)
Q Consensus        23 ~~~g--~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~-----~   93 (537)
                      ++++  .|..||.+++  +.+..++....+..+  .+.|        ++.++++++.++.|++||+.+++.+..     +
T Consensus        96 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~s~--------~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~  165 (433)
T 3bws_A           96 PEELNEKLIALDKEGITHRFISRFKTGFQPKSV--RFID--------NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY  165 (433)
T ss_dssp             GGGGTTCEEECCBTTCSEEEEEEEECSSCBCCC--EESS--------SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH
T ss_pred             cCCCceEEEEECCCCCcceEEEEEcCCCCceEE--EEeC--------CCeEEEEeCCCCeEEEEECCCCeEeeecCcccc
Confidence            3444  4444455445  556666655555555  5576        668889999899999999999887753     2


Q ss_pred             C-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee-ec
Q psy10942         94 G-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS-NE  171 (537)
Q Consensus        94 ~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~~  171 (537)
                      . +.+.|.+++|+|+++++++++.|+.|++||+.+           .+....+..|...+.+++|+ ++++.++++. .+
T Consensus       166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~  233 (433)
T 3bws_A          166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT-----------LAYKATVDLTGKWSKILLYD-PIRDLVYCSNWIS  233 (433)
T ss_dssp             HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT-----------CCEEEEEECSSSSEEEEEEE-TTTTEEEEEETTT
T ss_pred             cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC-----------ceEEEEEcCCCCCeeEEEEc-CCCCEEEEEecCC
Confidence            2 335899999999999999999999999999998           67788888898899999999 6666665443 44


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP  250 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~  250 (537)
                      +.    |                 ++||+       .+++.. ..     .+  ...+.++   +|+|+++++++++.+.
T Consensus       234 ~~----i-----------------~~~d~-------~~~~~~~~~-----~~--~~~~~~~---~~~~~g~~l~~~~~~~  275 (433)
T 3bws_A          234 ED----I-----------------SVIDR-------KTKLEIRKT-----DK--IGLPRGL---LLSKDGKELYIAQFSA  275 (433)
T ss_dssp             TE----E-----------------EEEET-------TTTEEEEEC-----CC--CSEEEEE---EECTTSSEEEEEEEES
T ss_pred             Cc----E-----------------EEEEC-------CCCcEEEEe-----cC--CCCceEE---EEcCCCCEEEEEECCC
Confidence            44    8                 99998       776665 22     23  4568999   9999999888776422


Q ss_pred             cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942        251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP  330 (537)
Q Consensus       251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  330 (537)
                      .-.   .                                  ..|+.|++||+.+++....      ..|...+.+++|+|
T Consensus       276 ~~~---~----------------------------------~~dg~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~  312 (433)
T 3bws_A          276 SNQ---E----------------------------------SGGGRLGIYSMDKEKLIDT------IGPPGNKRHIVSGN  312 (433)
T ss_dssp             CTT---C----------------------------------SCCEEEEEEETTTTEEEEE------EEEEECEEEEEECS
T ss_pred             Ccc---c----------------------------------cCCCeEEEEECCCCcEEee------ccCCCCcceEEECC
Confidence            111   0                                  1256777777776654221      23455788999999


Q ss_pred             CCCEE-EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        331 NDKLL-ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       331 ~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      +++.+ ++++.|+.|++||+. ..+.+..+. +..                                             
T Consensus       313 ~g~~l~~~~~~~~~v~v~d~~-~~~~~~~~~-~~~---------------------------------------------  345 (433)
T 3bws_A          313 TENKIYVSDMCCSKIEVYDLK-EKKVQKSIP-VFD---------------------------------------------  345 (433)
T ss_dssp             STTEEEEEETTTTEEEEEETT-TTEEEEEEE-CSS---------------------------------------------
T ss_pred             CCCEEEEEecCCCEEEEEECC-CCcEEEEec-CCC---------------------------------------------
Confidence            99755 556788999999988 444444332 111                                             


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEeC---------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC
Q psy10942        410 IITGGVWFVNFSPLDRILISSSG---------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                          .+.+++|+|+++++++++.               ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++.
T Consensus       346 ----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~  420 (433)
T 3bws_A          346 ----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF  420 (433)
T ss_dssp             ----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred             ----CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence                5677888888888887776               57999999999999988886 457899999999999998875


Q ss_pred             -CCcEEEEECCC
Q psy10942        475 -DGLLKLWSIKT  485 (537)
Q Consensus       475 -dg~v~vwd~~~  485 (537)
                       |+.|++|+++.
T Consensus       421 ~d~~i~v~~~~~  432 (433)
T 3bws_A          421 LDHQIRVYRRDG  432 (433)
T ss_dssp             TTTEEEEEEETT
T ss_pred             CCCeEEEEEecC
Confidence             99999999853

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.3e-31  Score=250.27  Aligned_cols=248  Identities=18%  Similarity=0.209  Sum_probs=196.5

Q ss_pred             ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcc--ccccc--cc
Q psy10942        140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ--SSSQQ--KH  215 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~--~~~~~--l~  215 (537)
                      +++..+.+|.+.|.+++|+ +++++|++++.++.    |                 ++||+       .  +.+..  +.
T Consensus         2 ~~~~~~~~h~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~iw~~-------~~~~~~~~~~~~   52 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLD-YYGKRLATCSSDKT----I-----------------KIFEV-------EGETHKLIDTLT   52 (379)
T ss_dssp             ---CCEEECCCCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEEE-------ETTEEEEEEEEC
T ss_pred             CccEEecCCcccEEEEEEc-CCCCEEEEEECCCc----E-----------------EEEec-------CCCcceeeeEec
Confidence            4566789999999999999 78888888887776    9                 99998       6  33333  66


Q ss_pred             ccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942        216 NTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       216 ~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  293 (537)
                           +|  ...|.++   +|+++  +++|++++.|+.|+  +|++..+..                             
T Consensus        53 -----~h--~~~v~~~---~~~~~~~~~~l~s~~~dg~v~--iwd~~~~~~-----------------------------   91 (379)
T 3jrp_A           53 -----GH--EGPVWRV---DWAHPKFGTILASCSYDGKVL--IWKEENGRW-----------------------------   91 (379)
T ss_dssp             -----CC--SSCEEEE---EECCGGGCSEEEEEETTSCEE--EEEEETTEE-----------------------------
T ss_pred             -----CC--CCcEEEE---EeCCCCCCCEEEEeccCCEEE--EEEcCCCce-----------------------------
Confidence                 89  9999999   99877  88999999888888  888776210                             


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCce-eeEEEEecCCCCEEEE
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLK-LLNVLRGHKKGTQIVS  370 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~l~~  370 (537)
                                  ..     ...+..|...|.+++|+|+  +++|++++.|+.|++||+..... ....+           
T Consensus        92 ------------~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----------  143 (379)
T 3jrp_A           92 ------------SQ-----IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-----------  143 (379)
T ss_dssp             ------------EE-----EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-----------
T ss_pred             ------------eE-----eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-----------
Confidence                        00     2233467889999999999  99999999999999999983311 11122           


Q ss_pred             EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-------------CCCEEEEEeCCCcEE
Q psy10942        371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-------------LDRILISSSGDATIK  437 (537)
Q Consensus       371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~i~  437 (537)
                                           ..|..                 .+.+++|+|             ++++|++++.|+.|+
T Consensus       144 ---------------------~~~~~-----------------~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  185 (379)
T 3jrp_A          144 ---------------------DAHAI-----------------GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK  185 (379)
T ss_dssp             ---------------------ECCTT-----------------CEEEEEECCCC----------CTTCEEEEEETTSCEE
T ss_pred             ---------------------cCCCC-----------------ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEE
Confidence                                 22333                 566666666             799999999999999


Q ss_pred             EEECCCce----eeeEeecCCcceEEEEEecC---CCEEEEEeCCCcEEEEECCCCe---eEEEe--cCCccceeccCCC
Q psy10942        438 LWCLTDYV----CLKSLEGHDASVLRCHFINK---GTQIVSTGADGLLKLWSIKTST---CVSTF--DKHALKIRNSDSE  505 (537)
Q Consensus       438 i~d~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~v~vwd~~~~~---~~~~~--~~~~~~i~~~~~~  505 (537)
                      +||+.+++    ....+.+|...|.+++|+|+   +++|++++.||.|++||+.+++   ....+  ..|...+      
T Consensus       186 i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v------  259 (379)
T 3jrp_A          186 IWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL------  259 (379)
T ss_dssp             EEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE------
T ss_pred             EEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE------
Confidence            99997643    55678889999999999999   8999999999999999998864   22222  3477778      


Q ss_pred             CCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        506 NDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       506 ~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                           .++   +|+|++++|++++.||.|++|
T Consensus       260 -----~~~---~~s~~g~~l~~~~~dg~i~iw  283 (379)
T 3jrp_A          260 -----WRA---SWSLSGNVLALSGGDNKVTLW  283 (379)
T ss_dssp             -----EEE---EECSSSCCEEEEESSSSEEEE
T ss_pred             -----EEE---EEcCCCCEEEEecCCCcEEEE
Confidence                 888   999999999999999999998

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=1.4e-31  Score=257.20  Aligned_cols=279  Identities=15%  Similarity=0.109  Sum_probs=215.0

Q ss_pred             eEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942         99 LVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD  177 (537)
Q Consensus        99 v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~  177 (537)
                      ...++++|+...++ +++.||.|+||++.....       .......+.+|.+.|.+++|+|.++++|++++.++.    
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~-------~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~----  105 (402)
T 2aq5_A           37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGR-------VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCT----  105 (402)
T ss_dssp             SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE-------CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSE----
T ss_pred             CCcEEECCCeEEEEEEEcCCCEEEEEECccCCC-------CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCe----
Confidence            44588899886544 468899999999965210       013455678999999999999448888888887777    


Q ss_pred             ccceeecccCCCcchhhHHHHHHHHHhhhccccc-------cc--ccccccccCCCcCeEEEEeccCcccCC-Ceeeecc
Q psy10942        178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-------QQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQS  247 (537)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-------~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~  247 (537)
                      |                 ++||+       .+..       ..  +.     +|  ...|.++   +|+|++ ++|++++
T Consensus       106 v-----------------~vw~~-------~~~~~~~~~~~~~~~~~-----~h--~~~v~~~---~~~p~~~~~l~s~~  151 (402)
T 2aq5_A          106 V-----------------MVWEI-------PDGGLVLPLREPVITLE-----GH--TKRVGIV---AWHPTAQNVLLSAG  151 (402)
T ss_dssp             E-----------------EEEEC-------CTTCCSSCBCSCSEEEE-----CC--SSCEEEE---EECSSBTTEEEEEE
T ss_pred             E-----------------EEEEc-------cCCCCccccCCceEEec-----CC--CCeEEEE---EECcCCCCEEEEEc
Confidence            9                 99998       6552       22  55     89  9999999   999998 6888888


Q ss_pred             CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc--cccCCCeEE
Q psy10942        248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK--KGHEKDINC  325 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~v~~  325 (537)
                      .|+.|+  +|++..+                                           +.     ...+  ..|...|.+
T Consensus       152 ~dg~i~--iwd~~~~-------------------------------------------~~-----~~~~~~~~~~~~v~~  181 (402)
T 2aq5_A          152 CDNVIL--VWDVGTG-------------------------------------------AA-----VLTLGPDVHPDTIYS  181 (402)
T ss_dssp             TTSCEE--EEETTTT-------------------------------------------EE-----EEEECTTTCCSCEEE
T ss_pred             CCCEEE--EEECCCC-------------------------------------------Cc-----cEEEecCCCCCceEE
Confidence            888888  7777652                                           11     1112  468889999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      ++|+|++++|++++.|+.|++||++ ..+.+..+ ..|..                                .       
T Consensus       182 ~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~--------------------------------~-------  221 (402)
T 2aq5_A          182 VDWSRDGALICTSCRDKRVRVIEPR-KGTVVAEKDRPHEG--------------------------------T-------  221 (402)
T ss_dssp             EEECTTSSCEEEEETTSEEEEEETT-TTEEEEEEECSSCS--------------------------------S-------
T ss_pred             EEECCCCCEEEEEecCCcEEEEeCC-CCceeeeeccCCCC--------------------------------C-------
Confidence            9999999999999999999999998 55555444 33322                                0       


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEE---eCCCcEEEEECCCcee-eeEee-cCCcceEEEEEecCCCEEEE-EeCCCcE
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISS---SGDATIKLWCLTDYVC-LKSLE-GHDASVLRCHFINKGTQIVS-TGADGLL  478 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~s-~~~dg~v  478 (537)
                               .+.+++|+|++++|++|   +.|+.|++||+.+++. +.... .|...+.+++|+|++++|++ ++.||.|
T Consensus       222 ---------~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i  292 (402)
T 2aq5_A          222 ---------RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSI  292 (402)
T ss_dssp             ---------SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCE
T ss_pred             ---------cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeE
Confidence                     37788999999999999   7899999999988654 33333 46778999999999999975 4579999


Q ss_pred             EEEECCCCee-EEEecC--CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        479 KLWSIKTSTC-VSTFDK--HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       479 ~vwd~~~~~~-~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++||+.+++. +..+..  |...+           .++   +|+|++.++++  .|+.+++|
T Consensus       293 ~i~d~~~~~~~~~~l~~~~~~~~v-----------~~~---~~sp~~~~~~s--~~~~~~~~  338 (402)
T 2aq5_A          293 RYFEITSEAPFLHYLSMFSSKESQ-----------RGM---GYMPKRGLEVN--KCEIARFY  338 (402)
T ss_dssp             EEEEECSSTTCEEEEEEECCSSCC-----------SEE---EECCGGGSCGG--GTEEEEEE
T ss_pred             EEEEecCCCcceEeecccccCCcc-----------cce---EEeccccccee--cceeEEEE
Confidence            9999998874 445544  44778           888   99999999875  56688887

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=1.2e-30  Score=249.20  Aligned_cols=236  Identities=14%  Similarity=0.115  Sum_probs=163.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEEccCCceee-
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--------NDKLLASGSLDKTVKVWSTTGGLKLL-  356 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~d~~i~i~d~~~~~~~~-  356 (537)
                      .++++++.|++|++||.+++..........+.+|.+.|++++|+|        |+++|++++.|++|++||+....... 
T Consensus       102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~  181 (393)
T 4gq1_A          102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA  181 (393)
T ss_dssp             EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred             CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence            679999999999999999887655444667889999999999998        88999999999999999998433332 


Q ss_pred             --------EEEEecCCC-CEEEEEcCCCcEEEEECCCCeeeeeeccCCcc----eEEEEEecCCCceE----EeeeeEEE
Q psy10942        357 --------NVLRGHKKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALK----IWTLAITKDENQII----TGGVWFVN  419 (537)
Q Consensus       357 --------~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~----~~~i~~~~  419 (537)
                              ..+..++++ .++++++.|++|++||+++++.......+...    .......+......    ...+.++.
T Consensus       182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~  261 (393)
T 4gq1_A          182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR  261 (393)
T ss_dssp             EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred             ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence                    233445555 57999999999999999998776555433222    22222222111111    12577888


Q ss_pred             Ec-CCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEE------------------Eec--CCCEEEEEeCCCcE
Q psy10942        420 FS-PLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH------------------FIN--KGTQIVSTGADGLL  478 (537)
Q Consensus       420 ~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~------------------~s~--~~~~l~s~~~dg~v  478 (537)
                      |+ |+++.|++++.|+.+++||+..++....+..|...+..+.                  |+|  ++.++++++.||.|
T Consensus       262 ~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V  341 (393)
T 4gq1_A          262 WIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI  341 (393)
T ss_dssp             EETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred             eecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence            86 8999999999999999999988777766666655444433                  333  34467788899999


Q ss_pred             EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      ++||+.+++....+..|..+|           .++   +|||||++||+++.||.+.
T Consensus       342 ~lwd~~~~~~~~~~~~~~~~V-----------~sv---afspdG~~LA~as~~Gv~l  384 (393)
T 4gq1_A          342 QLINTYEKDSNSIPIQLGMPI-----------VDF---CWHQDGSHLAIATEGSVLL  384 (393)
T ss_dssp             EEEETTCTTCCEEEEECSSCE-----------EEE---EECTTSSEEEEEESSEEEE
T ss_pred             EEEECCCCcEEEEecCCCCcE-----------EEE---EEcCCCCEEEEEeCCCeEE
Confidence            999999999998888999999           999   9999999999999888643

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.8e-30  Score=251.75  Aligned_cols=284  Identities=12%  Similarity=0.094  Sum_probs=212.1

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-------------------------------
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-------------------------------  145 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-------------------------------  145 (537)
                      .++.+++|+|||++|+++ .++.|++||+.+++..        +.+..+                               
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHW--------EFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKK   75 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEE--------EEEEEEECCC---------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcc--------eeeeecCCccccccccccccchhhccccccccccccc
Confidence            468899999999977665 5688999999885400        011111                               


Q ss_pred             -----------------------ecchhhhhhhhcccCCCccE-EEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        146 -----------------------VGFSDEILDIALLGEEDSHI-VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       146 -----------------------~~~~~~v~~~~~~~~~~~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                                             .+|.+.|.+++|+ +++++| ++++.++.    |                 ++||+ 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~~dg~----v-----------------~iwd~-  132 (450)
T 2vdu_B           76 LKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLT-SDESRLIACADSDKS----L-----------------LVFDV-  132 (450)
T ss_dssp             ------------------------CCCCCEEEEEEC-TTSSEEEEEEGGGTE----E-----------------EEEEE-
T ss_pred             cccCcCccccccCccccCCCCCCCccCCceEEEEEc-CCCCEEEEEECCCCe----E-----------------EEEEC-
Confidence                                   2344479999999 677775 66666666    9                 99999 


Q ss_pred             HHhhhcc--ccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee
Q psy10942        202 LEAKFKQ--SSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG  277 (537)
Q Consensus       202 ~~~~~~~--~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~  277 (537)
                            .  ++...  +.   ...|  ...|.++   +|+|++++|++++.++.+.  +|++.......           
T Consensus       133 ------~~~~~~~~~~~~---~~~~--~~~v~~~---~~sp~~~~l~~~~~~g~v~--~~~~~~~~~~~-----------  185 (450)
T 2vdu_B          133 ------DKTSKNVLKLRK---RFCF--SKRPNAI---SIAEDDTTVIIADKFGDVY--SIDINSIPEEK-----------  185 (450)
T ss_dssp             ------CSSSSSCEEEEE---EEEC--SSCEEEE---EECTTSSEEEEEETTSEEE--EEETTSCCCSS-----------
T ss_pred             ------cCCCCceeeeee---cccC--CCCceEE---EEcCCCCEEEEEeCCCcEE--EEecCCccccc-----------
Confidence                  6  55544  32   1156  7889999   9999999999999998888  88876631100           


Q ss_pred             eeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCce
Q psy10942        278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN---DKLLASGSLDKTVKVWSTTGGLK  354 (537)
Q Consensus       278 ~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~i~d~~~~~~  354 (537)
                                                  ..     ...+.+|...|.+++|+|+   +++|++++.|+.|++||+. ...
T Consensus       186 ----------------------------~~-----~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~-~~~  231 (450)
T 2vdu_B          186 ----------------------------FT-----QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP-QCF  231 (450)
T ss_dssp             ----------------------------CC-----CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES-CTT
T ss_pred             ----------------------------cc-----ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC-CCc
Confidence                                        00     2245678899999999999   9999999999999999998 333


Q ss_pred             eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942        355 LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       355 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  434 (537)
                      .+..+                               +.+|..                 .|.+++|+ ++++|++++.|+
T Consensus       232 ~~~~~-------------------------------~~~h~~-----------------~v~~~~~s-d~~~l~s~~~d~  262 (450)
T 2vdu_B          232 IVDKW-------------------------------LFGHKH-----------------FVSSICCG-KDYLLLSAGGDD  262 (450)
T ss_dssp             CEEEE-------------------------------CCCCSS-----------------CEEEEEEC-STTEEEEEESSS
T ss_pred             eeeee-------------------------------ecCCCC-----------------ceEEEEEC-CCCEEEEEeCCC
Confidence            33321                               112222                 78899999 999999999999


Q ss_pred             cEEEEECCCceeeeEeecC-------------------------CcceEEEEEecCCCEEEEEe-CCCcEEEEEC--CCC
Q psy10942        435 TIKLWCLTDYVCLKSLEGH-------------------------DASVLRCHFINKGTQIVSTG-ADGLLKLWSI--KTS  486 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~--~~~  486 (537)
                      .|++||+.+++++..+..+                         ...|.+++|+|++++|++++ .|+.|++|++  .++
T Consensus       263 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~  342 (450)
T 2vdu_B          263 KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK  342 (450)
T ss_dssp             EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred             eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence            9999999999988887632                         35689999999999999999 8999999999  666


Q ss_pred             ---eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC------CCCEEeC
Q psy10942        487 ---TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW------SPQVVVY  537 (537)
Q Consensus       487 ---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~------dg~i~vW  537 (537)
                         +.+..+..| ..+           .++   +|+|++.++++++.      +..|.+|
T Consensus       343 ~~l~~~~~~~~~-~~v-----------~~~---~~~~~~~~v~~~~~~~~~~~~~~i~v~  387 (450)
T 2vdu_B          343 GDLALKQIITFP-YNV-----------ISL---SAHNDEFQVTLDNKESSGVQKNFAKFI  387 (450)
T ss_dssp             TCEEEEEEEECS-SCE-----------EEE---EEETTEEEEEECCTTCCSSCCCSEEEE
T ss_pred             CceeeccEeccC-Cce-----------EEE---EecCCcEEEEEecccCCCCCCcceEEE
Confidence               777788888 778           888   99996433333332      4446665

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.97  E-value=9.4e-29  Score=265.33  Aligned_cols=425  Identities=9%  Similarity=-0.017  Sum_probs=283.6

Q ss_pred             eeeeeeeeccCCcceEEEecC------cceEEEEEcCccceeeeecccccc-------ceeeeEeecCccccccCCcEEE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGR------DKVLFTWDLSSRKQLRSYPAYESL-------ETCAVFHLSDETESKSGGKTFV   70 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~------~g~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~   70 (537)
                      .|.+++||  |||++|+.++.      +..|.+||+.+++......+...+       ..+  .++|        +++++
T Consensus        54 ~v~~~~~S--PDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~--~~Sp--------Dg~ll  121 (1045)
T 1k32_A           54 VINNARFF--PDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVA--GFDP--------DGNLI  121 (1045)
T ss_dssp             EEEEEEEC--TTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEE--EECT--------TCCEE
T ss_pred             cccCeEEC--CCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccc--cCCC--------CCEEE
Confidence            58899999  89999998854      357999999988744333333333       445  6688        44577


Q ss_pred             EEeCcc------ceEEeeeccceehhhhc--------------------------------------------------C
Q psy10942         71 LAGGEK------SLLHYYETSAVKELYQH--------------------------------------------------G   94 (537)
Q Consensus        71 ~~~~~~------~~i~~wd~~~~~~~~~~--------------------------------------------------~   94 (537)
                      ++++.+      ..|..||+.+++.....                                                  .
T Consensus       122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~  201 (1045)
T 1k32_A          122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD  201 (1045)
T ss_dssp             EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred             EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence            777643      45888888766532111                                                  1


Q ss_pred             CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      +.+.+.+++|+++ .++++++.++.+.||.+...          ....+.+..|.. +..++|+ ++++.++++ .++. 
T Consensus       202 ~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~----------g~~~~~l~~~~~-~~~~~~S-pDG~~la~~-~~~~-  266 (1045)
T 1k32_A          202 MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD----------GKDLRKHTSFTD-YYPRHLN-TDGRRILFS-KGGS-  266 (1045)
T ss_dssp             CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT----------SCSCEECCCCCS-SCEEEEE-ESSSCEEEE-ETTE-
T ss_pred             CCCcccceEEeCC-EEEEEEeccCceEEEEEeCC----------CCcceEecCCCC-cceeeEc-CCCCEEEEE-eCCE-
Confidence            1235667778887 56667777888899987642          233455555553 6677899 788888776 3444 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccc------cccccCCCcCeEEEEeccCcc-cCCCeeeec
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHN------TERLGRDELKTVTLLERGKTV-KEEDLFPRQ  246 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~------~~~~~h~~~~~v~~~~~~~~s-~~~~~l~~~  246 (537)
                         |                 .+|+.       ...... +..      .....|  ...+.++   +|+ |||++++++
T Consensus       267 ---i-----------------~~~d~-------~~~~l~~l~~~~~~~~~~~~~~--~~~v~~~---~~S~pdG~~la~~  314 (1045)
T 1k32_A          267 ---I-----------------YIFNP-------DTEKIEKIEIGDLESPEDRIIS--IPSKFAE---DFSPLDGDLIAFV  314 (1045)
T ss_dssp             ---E-----------------EEECT-------TTCCEEECCCCCCCBCCSEEEE--CGGGGEE---EEEECGGGCEEEE
T ss_pred             ---E-----------------EEecC-------CceEeeeeccCccccccccccc--cccccee---eecCCCCCEEEEE
Confidence               8                 77876       333222 220      000124  4568899   999 999999988


Q ss_pred             cCCCcceeccccccCCCccccccccc-ccceeeeeeCCcceEEEEEeCCCeEE-EEECCCCceeeeeecccccccCCCeE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVP-EAEHGAFYTGGTVELLASGSLDKTVK-VWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~d~~i~-i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      + ++.+.  +|+...+.......... ........ +  -..++.++.++.+. +|+..+++.      ..+..|...+.
T Consensus       315 ~-~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~~------~~l~~~~~~~~  382 (1045)
T 1k32_A          315 S-RGQAF--IQDVSGTYVLKVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGKA------EKFEENLGNVF  382 (1045)
T ss_dssp             E-TTEEE--EECTTSSBEEECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCCE------EECCCCCCSEE
T ss_pred             E-cCEEE--EEcCCCCceEEccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCCc------eEecCCcccee
Confidence            7 77888  99987643111000000 01111222 1  14677777788888 999987753      12236778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE----------EecCCCCEEEEEcCCC----------cEEEEECCC
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL----------RGHKKGTQIVSTGADG----------LLKLWSIKT  384 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------~~~~~~~~l~~~~~d~----------~i~i~d~~~  384 (537)
                      .++|+|||++|++++.++.|++||+. .++.....          ...++++++++++.++          .|++||+.+
T Consensus       383 ~~~~SpDG~~la~~~~~~~v~~~d~~-tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~  461 (1045)
T 1k32_A          383 AMGVDRNGKFAVVANDRFEIMTVDLE-TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG  461 (1045)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred             eeEECCCCCEEEEECCCCeEEEEECC-CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence            99999999999999999999999998 44443333          4456788888877644          899999998


Q ss_pred             CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc--------------------
Q psy10942        385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY--------------------  444 (537)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--------------------  444 (537)
                      ++ ...+..+..                 .+..++|+|||++|++++.++...+|+....                    
T Consensus       462 g~-~~~l~~~~~-----------------~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (1045)
T 1k32_A          462 RK-IFAATTENS-----------------HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSP  523 (1045)
T ss_dssp             TE-EEECSCSSS-----------------BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCC
T ss_pred             Cc-EEEeeCCCc-----------------ccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCC
Confidence            87 555555554                 4556777888888877777666555543221                    


Q ss_pred             -----------------------eeeeEeecCCcceEEEEEecCCCEEEE-------------EeCCCcEEEEECCCCee
Q psy10942        445 -----------------------VCLKSLEGHDASVLRCHFINKGTQIVS-------------TGADGLLKLWSIKTSTC  488 (537)
Q Consensus       445 -----------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s-------------~~~dg~v~vwd~~~~~~  488 (537)
                                             ..+..+..|.+.+..++++||++++++             ......|.+||+.+++.
T Consensus       524 ~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~  603 (1045)
T 1k32_A          524 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV  603 (1045)
T ss_dssp             CGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred             CccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE
Confidence                                   112234446677899999999987875             12345788999988875


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .. +.   ..+           .++   +|||||+.|++++.| .|++|
T Consensus       604 ~~-l~---~~v-----------~~~---~~S~DG~~l~~~~~~-~i~~~  633 (1045)
T 1k32_A          604 TE-VK---NNL-----------TDL---RLSADRKTVMVRKDD-GKIYT  633 (1045)
T ss_dssp             EE-EE---EEE-----------EEE---EECTTSCEEEEEETT-SCEEE
T ss_pred             EE-ee---cCc-----------ceE---EECCCCCEEEEEcCC-cEEEE
Confidence            43 32   456           777   999999999998866 67776

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.1e-29  Score=247.62  Aligned_cols=349  Identities=12%  Similarity=0.075  Sum_probs=221.6

Q ss_pred             ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccc---eeeeeccccc-cceeeeEeecCccccccCCcEEEEEeCccc
Q psy10942          2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK---QLRSYPAYES-LETCAVFHLSDETESKSGGKTFVLAGGEKS   77 (537)
Q Consensus         2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (537)
                      +.+++|++|+  ++|++|+++ .++.|++||+++|+   .+...+.... .....+...+.       ....+.....+.
T Consensus         4 ~~p~~~v~~s--~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~   73 (450)
T 2vdu_B            4 IHPLQNLLTS--RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKE-------QQGQSSENENEN   73 (450)
T ss_dssp             ECCCCEEEEC--SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred             cccEEEEEec--CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchh-------hccccccccccc
Confidence            4578999999  888866666 56789999999999   6555542221 11110000110       111111111111


Q ss_pred             eE-E----------eeeccceehhhh-cCCCcceEEEEEeccccEE-EEEeCCceEEEEecc--cccCccccccccccee
Q psy10942         78 LL-H----------YYETSAVKELYQ-HGLSSPLVRIVRSSVKRMY-AVVTADHNISLYRLN--SETGLEERPNKILKFR  142 (537)
Q Consensus        78 ~i-~----------~wd~~~~~~~~~-~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~  142 (537)
                      .- +          .+...  ..... ..+.+.|.+++|+|++++| |+++.|+.|++||+.  +           ++.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~-----------~~~~  140 (450)
T 2vdu_B           74 KKLKSNKGDSIKRTAAKVP--SPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS-----------KNVL  140 (450)
T ss_dssp             ----------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS-----------SSCE
T ss_pred             cccccCcCccccccCcccc--CCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC-----------Ccee
Confidence            00 0          00000  00001 1223579999999999996 888899999999998  6           5666


Q ss_pred             EEee--cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccc-ccccc
Q psy10942        143 KQFV--GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQK-HNTER  219 (537)
Q Consensus       143 ~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l-~~~~~  219 (537)
                      ..+.  .|...|.+++|+ +++.+|++++.++.    +                 ++|++       ....... ....+
T Consensus       141 ~~~~~~~~~~~v~~~~~s-p~~~~l~~~~~~g~----v-----------------~~~~~-------~~~~~~~~~~~~~  191 (450)
T 2vdu_B          141 KLRKRFCFSKRPNAISIA-EDDTTVIIADKFGD----V-----------------YSIDI-------NSIPEEKFTQEPI  191 (450)
T ss_dssp             EEEEEEECSSCEEEEEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TSCCCSSCCCCCS
T ss_pred             eeeecccCCCCceEEEEc-CCCCEEEEEeCCCc----E-----------------EEEec-------CCcccccccceee
Confidence            6666  556789999999 78888888877666    8                 88877       4443321 11122


Q ss_pred             ccCCCcCeEEEEeccCcccC---CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        220 LGRDELKTVTLLERGKTVKE---EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~~---~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                      .+|  ...|.++   +|+|+   +++|++++.|+.|+  +|++..+                                  
T Consensus       192 ~~h--~~~v~~~---~~sp~~~~~~~l~s~~~d~~i~--vwd~~~~----------------------------------  230 (450)
T 2vdu_B          192 LGH--VSMLTDV---HLIKDSDGHQFIITSDRDEHIK--ISHYPQC----------------------------------  230 (450)
T ss_dssp             EEC--SSCEEEE---EEEECTTSCEEEEEEETTSCEE--EEEESCT----------------------------------
T ss_pred             ecc--cCceEEE---EEcCCCCCCcEEEEEcCCCcEE--EEECCCC----------------------------------
Confidence            389  9999999   99999   88888888888888  8877652                                  


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL  376 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~  376 (537)
                               ...    ...+.+|...|.+++|+ ++++|++++.|+.|++||+. ..+.+..+..+.....++       
T Consensus       231 ---------~~~----~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~~~~~-------  288 (450)
T 2vdu_B          231 ---------FIV----DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK-TGKNLSTFDYNSLIKPYL-------  288 (450)
T ss_dssp             ---------TCE----EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT-TCCEEEEEECHHHHGGGC-------
T ss_pred             ---------cee----eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC-CCcEeeeecchhhhhhhh-------
Confidence                     111    11134688999999999 99999999999999999998 566666665331100000       


Q ss_pred             EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEEC--CCc---eeeeEe
Q psy10942        377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCL--TDY---VCLKSL  450 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~---~~~~~~  450 (537)
                                    ...+..+   ..+.+.........+.+++|+|++++|++++ .++.|++|++  .++   +.+..+
T Consensus       289 --------------~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~  351 (450)
T 2vdu_B          289 --------------NDQHLAP---PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQII  351 (450)
T ss_dssp             --------------CTTSBC-------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEE
T ss_pred             --------------hhccccc---ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEe
Confidence                          0000000   0000000000011688899999999999999 8999999999  555   777888


Q ss_pred             ecCCcceEEEEEecCCCEEEEE-eC------CCcEEEEECC
Q psy10942        451 EGHDASVLRCHFINKGTQIVST-GA------DGLLKLWSIK  484 (537)
Q Consensus       451 ~~~~~~v~~~~~s~~~~~l~s~-~~------dg~v~vwd~~  484 (537)
                      ..| +.|.+++|+|++ ++++. +.      +..|.+|.+.
T Consensus       352 ~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          352 TFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             ECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred             ccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence            888 889999999964 44444 32      4558888764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=2.5e-30  Score=245.46  Aligned_cols=305  Identities=13%  Similarity=0.142  Sum_probs=217.7

Q ss_pred             EEcCccceeeeec-cccccceeeeEeecCccccccCC--cEEEEEeCccceEEeeeccc-eehh-hhcC-CCcceEEEEE
Q psy10942         31 WDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGG--KTFVLAGGEKSLLHYYETSA-VKEL-YQHG-LSSPLVRIVR  104 (537)
Q Consensus        31 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~wd~~~-~~~~-~~~~-~~~~v~~~~~  104 (537)
                      |+....+.+..+. +.+.+.++  .+.|.       +  +.++++++.||.|++||+.+ ++.+ ..+. +.+.|.+++|
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~--~~~~~-------~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~   94 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCL--SFSPP-------TLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW   94 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEE--EECCT-------TSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE
T ss_pred             CCCCCcceeEeccCCCCceEEE--EEcCC-------CCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE
Confidence            4455566666554 66778888  56883       3  69999999999999999987 5444 4444 4479999999


Q ss_pred             eccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc--ccCCCccEEEeeeccccCCccccee
Q psy10942        105 SSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL--LGEEDSHIVVASNEYLNGGDLSGLV  182 (537)
Q Consensus       105 s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~~~i~~~~  182 (537)
                      +|++++|++++.|+.|++||+.+           .+... +.+|...|.+++|  + +++.++++++.++.    |    
T Consensus        95 ~~~~~~l~s~~~dg~v~iwd~~~-----------~~~~~-~~~~~~~v~~~~~~~~-~~~~~l~~~~~dg~----i----  153 (368)
T 3mmy_A           95 SDDGSKVFTASCDKTAKMWDLSS-----------NQAIQ-IAQHDAPVKTIHWIKA-PNYSCVMTGSWDKT----L----  153 (368)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTT-----------TEEEE-EEECSSCEEEEEEEEC-SSCEEEEEEETTSE----E----
T ss_pred             CcCCCEEEEEcCCCcEEEEEcCC-----------CCcee-eccccCceEEEEEEeC-CCCCEEEEccCCCc----E----
Confidence            99999999999999999999998           45443 6679999999999  6 67777888887777    9    


Q ss_pred             ecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccccc
Q psy10942        183 KLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRK  260 (537)
Q Consensus       183 ~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~  260 (537)
                                   ++||+       ++++..  +.     .+   ..+.++   .+.  ...+++++.++.+.  +|++.
T Consensus       154 -------------~vwd~-------~~~~~~~~~~-----~~---~~~~~~---~~~--~~~~~~~~~~~~i~--~~~~~  198 (368)
T 3mmy_A          154 -------------KFWDT-------RSSNPMMVLQ-----LP---ERCYCA---DVI--YPMAVVATAERGLI--VYQLE  198 (368)
T ss_dssp             -------------EEECS-------SCSSCSEEEE-----CS---SCEEEE---EEE--TTEEEEEEGGGCEE--EEECS
T ss_pred             -------------EEEEC-------CCCcEEEEEe-----cC---CCceEE---Eec--CCeeEEEeCCCcEE--EEEec
Confidence                         99999       766655  33     34   344454   333  33555556666666  66655


Q ss_pred             CCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE----EE
Q psy10942        261 TYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL----LA  336 (537)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----l~  336 (537)
                      .                                           ....... .  ...+...+.++.+.++...    ++
T Consensus       199 ~-------------------------------------------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  232 (368)
T 3mmy_A          199 N-------------------------------------------QPSEFRR-I--ESPLKHQHRCVAIFKDKQNKPTGFA  232 (368)
T ss_dssp             S-------------------------------------------SCEEEEE-C--CCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred             c-------------------------------------------ccchhhh-c--cccccCCCceEEEcccCCCCCCeEE
Confidence            4                                           2221111 1  1122334556666554443    89


Q ss_pred             EEeCCCcEEEEEccCCc--eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        337 SGSLDKTVKVWSTTGGL--KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       337 ~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++.|+.|++|++....  .....+..|.....                    ......|                 ...
T Consensus       233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-----------------~~~  275 (368)
T 3mmy_A          233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT--------------------NTSAPQD-----------------IYA  275 (368)
T ss_dssp             EEETTSEEEEEESSCSCHHHHSEEEECSEEC------------------------CCCEE-----------------ECC
T ss_pred             EecCCCcEEEEecCCCCccccceeeeeeecccc--------------------ccccccc-----------------ccc
Confidence            99999999999998321  33444444432000                    0000011                 116


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      +.+++|+|++++|++++.||.|++||+.+++++..+.+|...|++++|+|++++|++++.|+..+.|++
T Consensus       276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred             eEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence            899999999999999999999999999999999999999999999999999999999999876555543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=2.2e-29  Score=248.81  Aligned_cols=332  Identities=12%  Similarity=0.084  Sum_probs=239.8

Q ss_pred             eeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec--cc
Q psy10942          9 DVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET--SA   86 (537)
Q Consensus         9 ~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~--~~   86 (537)
                      .|+  +++.++++++.+++|.+||.++++.+.+++....+..+  .++|        +++++++++.++.|++||+  .+
T Consensus       144 ~~~--p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v--~~sp--------dg~~l~v~~~d~~V~v~D~~~~t  211 (543)
T 1nir_A          144 DLD--LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS--RMSA--------SGRYLLVIGRDARIDMIDLWAKE  211 (543)
T ss_dssp             CCC--GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSS
T ss_pred             ccC--CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceE--EECC--------CCCEEEEECCCCeEEEEECcCCC
Confidence            466  68889999999999999999999999998855555545  5688        7789999999999999999  88


Q ss_pred             eehhhhcCCCcceEEEEEec----cccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecc----------hh-
Q psy10942         87 VKELYQHGLSSPLVRIVRSS----VKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGF----------SD-  150 (537)
Q Consensus        87 ~~~~~~~~~~~~v~~~~~s~----~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~-  150 (537)
                      ++.+.++.....+..++|+|    ||++|++++. +++|.+||..+           +++++++..+          .. 
T Consensus       212 ~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-----------~~~~~~i~~~g~~~~~~~~~~~~  280 (543)
T 1nir_A          212 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-----------LEPKQIVSTRGMTVDTQTYHPEP  280 (543)
T ss_dssp             CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-----------CCEEEEEECCEECSSSCCEESCC
T ss_pred             CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-----------cccceeecccCcccCccccccCC
Confidence            98888888777899999999    9999999885 89999999988           6777777642          22 


Q ss_pred             hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEE
Q psy10942        151 EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVT  229 (537)
Q Consensus       151 ~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~  229 (537)
                      .+.++.++|.+...++....+    +.|                 .+||.       .+.+.. ..   ...+  ...+.
T Consensus       281 ~v~~i~~s~~~~~~~vs~~~~----g~i-----------------~vvd~-------~~~~~l~~~---~i~~--~~~~~  327 (543)
T 1nir_A          281 RVAAIIASHEHPEFIVNVKET----GKV-----------------LLVNY-------KDIDNLTVT---SIGA--APFLH  327 (543)
T ss_dssp             CEEEEEECSSSSEEEEEETTT----TEE-----------------EEEEC-------TTSSSCEEE---EEEC--CSSCC
T ss_pred             ceEEEEECCCCCEEEEEECCC----CeE-----------------EEEEe-------cCCCcceeE---Eecc--CcCcc
Confidence            577889994343333333333    448                 88887       544332 11   0134  45677


Q ss_pred             EEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942        230 LLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL  308 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~  308 (537)
                      .+   .|+|+|++++++ ..++.|.  +||..++                                           +..
T Consensus       328 ~~---~~spdg~~l~va~~~~~~v~--v~D~~tg-------------------------------------------~l~  359 (543)
T 1nir_A          328 DG---GWDSSHRYFMTAANNSNKVA--VIDSKDR-------------------------------------------RLS  359 (543)
T ss_dssp             CE---EECTTSCEEEEEEGGGTEEE--EEETTTT-------------------------------------------EEE
T ss_pred             Cc---eECCCCCEEEEEecCCCeEE--EEECCCC-------------------------------------------eEE
Confidence            78   899999876644 4466677  6666652                                           211


Q ss_pred             eeeecccccccCCCeEEEEEcCC-CCEEEEEe-CCCcEEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        309 LNVLRGHKKGHEKDINCVTVSPN-DKLLASGS-LDKTVKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~-~d~~i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                      ..+ ......|.+....+ ++|+ +..++++. .|++|.+||+...      .+.++.+..+..                
T Consensus       360 ~~i-~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~----------------  421 (543)
T 1nir_A          360 ALV-DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG----------------  421 (543)
T ss_dssp             EEE-ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS----------------
T ss_pred             Eee-ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC----------------
Confidence            111 00111344333333 4677 55666665 5789999998831      444444444432                


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-------CCCcEEEEECCCceee-eEe--
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-------GDATIKLWCLTDYVCL-KSL--  450 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~-~~~--  450 (537)
                                                       ++..++++|++++|++++       .+++|.+||+.+++.. ..+  
T Consensus       422 ---------------------------------~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v  468 (543)
T 1nir_A          422 ---------------------------------GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI  468 (543)
T ss_dssp             ---------------------------------CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred             ---------------------------------CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeec
Confidence                                             567788999999999987       2679999999998776 333  


Q ss_pred             ------ecCCcceEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEEecCC
Q psy10942        451 ------EGHDASVLRCHFINKGTQIVSTG-----ADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       451 ------~~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                            ..+...+..+.|+|+|+.|+++.     .|+.|.|||..+++++.+++.+
T Consensus       469 ~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~  524 (543)
T 1nir_A          469 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP  524 (543)
T ss_dssp             HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence                  34567899999999999998763     4799999999999999988753

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.97  E-value=1e-29  Score=239.07  Aligned_cols=293  Identities=11%  Similarity=0.065  Sum_probs=193.6

Q ss_pred             eeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc
Q psy10942         81 YYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG  159 (537)
Q Consensus        81 ~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  159 (537)
                      +|++.+.+.+.....| +.|.+++|+|||++||+|+.++ +++||..+           .+.......+  .+..+++. 
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~-----------~~~~~~~~~~--~~~~~~~~-   67 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP-----------VAHIMSQEMR--HLSKVRML-   67 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETT-----------EEEEEEEECS--CCCEEEEC-
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC-----------cceeeeeecC--CeEEEEEc-
Confidence            4566666666555544 6999999999999999998775 78999887           4444333322  36677777 


Q ss_pred             CCCccEE-EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc
Q psy10942        160 EEDSHIV-VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV  237 (537)
Q Consensus       160 ~~~~~l~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s  237 (537)
                      ++.+.++ +++.++.    |                 ++||.       .+++.. ..     .+  ...|.++   +++
T Consensus        68 ~~~~~~~~~~~~d~~----v-----------------~iWd~-------~~~~~~~~~-----~~--~~~v~~v---~~~  109 (355)
T 3vu4_A           68 HRTNYVAFVTGVKEV----V-----------------HIWDD-------VKKQDVSRI-----KV--DAPVKDL---FLS  109 (355)
T ss_dssp             TTSSEEEEECSSTTE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EEC
T ss_pred             CCCCEEEEEECCccE----E-----------------EEEEC-------CCCcEEEEE-----EC--CCceEEE---EEc
Confidence            4455554 4444444    9                 99999       877776 22     45  6789999   998


Q ss_pred             cCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE--EeCCCeEEEEECCCCceeee-----
Q psy10942        238 KEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS--GSLDKTVKVWSTTGGLKLLN-----  310 (537)
Q Consensus       238 ~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~d~~i~i~~~~~~~~~~~-----  310 (537)
                      ++.  ++.+ .++.++  +|++......... +..+.......  .  ..++.  |+.+|.|++||+.++.....     
T Consensus       110 ~~~--~~~~-~~~~i~--i~d~~~~~~~~~~-~~~~~~~~~~s--~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~  179 (355)
T 3vu4_A          110 REF--IVVS-YGDVIS--VFKFGNPWKRITD-DIRFGGVCEFS--N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV  179 (355)
T ss_dssp             SSE--EEEE-ETTEEE--EEESSTTCCBSSC-CEEEEEEEEEE--T--TEEEEEESSCTTCEEEEECCC-----------
T ss_pred             CCE--EEEE-EcCEEE--EEECCCCceeeEE-eccCCceEEEE--c--cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence            875  3333 367899  9999875111111 00000000000  1  34444  68999999999987641100     


Q ss_pred             -----ee-cccccccCCCeEEEEEcCCCCEEEEEeCCCc-EEEEEccCCceeeEEEE-e-cCCCCEEEEEcCCCcEEEEE
Q psy10942        311 -----VL-RGHKKGHEKDINCVTVSPNDKLLASGSLDKT-VKVWSTTGGLKLLNVLR-G-HKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       311 -----~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~-~-~~~~~~l~~~~~d~~i~i~d  381 (537)
                           .. ...+.+|...|.+++|+|++++|++++.|++ |++||+. ..+.+..+. + |..                 
T Consensus       180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~-~~~~~~~~~~g~h~~-----------------  241 (355)
T 3vu4_A          180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE-DGVLVREFRRGLDRA-----------------  241 (355)
T ss_dssp             -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT-TCCEEEEEECTTCCS-----------------
T ss_pred             cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEEEcCCCCC-----------------
Confidence                 00 2346789999999999999999999999998 9999998 555555554 2 333                 


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEee--------
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLE--------  451 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~--------  451 (537)
                                                      .|.+++|+|++++|++++.|+.|++||+..+..  ...+.        
T Consensus       242 --------------------------------~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~  289 (355)
T 3vu4_A          242 --------------------------------DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF  289 (355)
T ss_dssp             --------------------------------CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred             --------------------------------cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccc
Confidence                                            889999999999999999999999999976421  11110        


Q ss_pred             -------------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        452 -------------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       452 -------------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                                   .+......++|++++++|++++.||.+++|++..+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~  337 (355)
T 3vu4_A          290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD  337 (355)
T ss_dssp             CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred             ccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence                         11223467999999999999999999999997543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=9.6e-29  Score=220.81  Aligned_cols=287  Identities=11%  Similarity=0.024  Sum_probs=190.0

Q ss_pred             eEEEecCcceEEEEEcCcc---ceeeeecccc-ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942         18 FSVHCGRDKVLFTWDLSSR---KQLRSYPAYE-SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH   93 (537)
Q Consensus        18 ~l~s~~~~g~v~iwd~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~   93 (537)
                      .++++++.. |++|+..++   +++++....+ ++..+  +++|+.      .+.+.++.|        +++.       
T Consensus        56 ~~~~~~~~~-v~lw~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~------~~~~~~~~~--------~~~~-------  111 (356)
T 2w18_A           56 CIITACEDV-VSLWKALDAWQWEKLYTWHFAEVPVLQI--VPVPDV------YNLVCVALG--------NLEI-------  111 (356)
T ss_dssp             EEEEEESSE-EEEEEESSSSBEEEEEEEECCSSCEEEE--CCCTTC------CSCEEEEEC--------SSSE-------
T ss_pred             EEEEeccce-EEEcccCCCccceeeEEEeccCceeEEE--EEcCcc------cceeeeeec--------cccc-------
Confidence            677777655 999999998   7777776433 56666  678841      112222222        1111       


Q ss_pred             CCCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEE-eecchhhhhhhhcccCCCccEEEe
Q psy10942         94 GLSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ-FVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        94 ~~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                         ..|.+++|+||    +++++.++.+  +.+|++.+           ++++.. ..+|...|..++|+ ++++.+.. 
T Consensus       112 ---~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~-----------g~lv~ss~~g~d~~V~~~~~s-~dG~~~~s-  173 (356)
T 2w18_A          112 ---REIRALFCSSDDESEKQVLLKSGNI--KAVLGLTK-----------RRLVSSSGTLSDQQVEVMTFA-EDGGGKEN-  173 (356)
T ss_dssp             ---EEEEEECC------CCEEEEEEEEE--EEEEEETT-----------TEEEEEESSSTTCEEEEEEEC-TTSCEEEE-
T ss_pred             ---cceEEEEECCCccccccEEEeCCCe--EEEEecCC-----------CcEEEecccCCCCcEEEEEEC-CCCceeee-
Confidence               46999999999    9999998754  88899977           566666 57888889888888 55554431 


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCccc---CCCeeee
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVK---EEDLFPR  245 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~---~~~~l~~  245 (537)
                               +                                    .     +|  ...+..+   +|+|   ++.+|++
T Consensus       174 ---------~------------------------------------~-----~~--~~~v~~l---~fs~~~g~~~~LaS  198 (356)
T 2w18_A          174 ---------Q------------------------------------F-----LM--PPEETIL---TFAEVQGMQEALLG  198 (356)
T ss_dssp             ---------E------------------------------------E-----EC--CCSSCEE---EEEEEETSTTEEEE
T ss_pred             ---------e------------------------------------c-----cC--CCceeeE---EeeccCCCCceEEE
Confidence                     1                                    1     56  6667777   7888   6688888


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      ++.|++|+  +||+.+++    +                            ++.+..  .           ..+...+.+
T Consensus       199 gS~D~TIk--IWDl~TGk----~----------------------------l~tL~g--~-----------~~~v~~v~~  231 (356)
T 2w18_A          199 TTIMNNIV--IWNLKTGQ----L----------------------------LKKMHI--D-----------DSYQASVCH  231 (356)
T ss_dssp             EETTSEEE--EEETTTCC----E----------------------------EEEEEC--C-----------C---CCCEE
T ss_pred             ecCCCcEE--EEECCCCc----E----------------------------EEEEcC--C-----------CcceeeeEE
Confidence            88888888  77777631    1                            111110  0           012246788


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      ++|+|+|+++++++.+..  +|                   .+++++.|+++++||..+++.+..+.        +.+ |
T Consensus       232 vafSpdG~~lvs~s~~~~--~w-------------------~laSGs~D~tIklWd~~tgk~l~v~~--------~~~-p  281 (356)
T 2w18_A          232 KAYSEMGLLFIVLSHPCA--KE-------------------SESLRSPVFQLIVINPKTTLSVGVML--------YCL-P  281 (356)
T ss_dssp             EEEEETTEEEEEEC---------------------------------CCEEEEEEETTTTEEEEEEE--------ECC-C
T ss_pred             EEECCCCCEEEEeccCCC--cc-------------------eeeccCCCcEEEEEECCCCEEEEEEE--------eec-c
Confidence            999999999988876432  23                   35678889999999999988775431        111 2


Q ss_pred             CCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceE-EEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVL-RCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      ++...   .+.  ..+.++.++++++.|++|+|||+.+++++.++++|...+. .++|+|||++|++|+.|++|+|||+
T Consensus       282 ~Gh~~---~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          282 PGQAG---RFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTCCC---CEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCCcc---eeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            22110   122  2233378899999999999999999999999999987665 5899999999999999999999995

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=4.3e-29  Score=241.59  Aligned_cols=264  Identities=18%  Similarity=0.279  Sum_probs=201.4

Q ss_pred             cCCCcceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942         93 HGLSSPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        93 ~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      +.+.+.|.+++|+|+ +.+||+++.||.|++||+....... .+.........+.+|...|.+++|+|.+...|++++.+
T Consensus       125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d  203 (430)
T 2xyi_A          125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP-EPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD  203 (430)
T ss_dssp             EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC-CTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred             EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc-CccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence            344479999999997 7899999999999999998621110 01111456778899999999999994444378777777


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCccc-CCCeeeec
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQ  246 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~  246 (537)
                      +.    |                 ++|++       ......    -....+.+|  ...|.++   +|+| ++.+|+++
T Consensus       204 g~----i-----------------~vwd~-------~~~~~~~~~~~~~~~~~~h--~~~v~~v---~~~p~~~~~l~s~  250 (430)
T 2xyi_A          204 HT----I-----------------CLWDI-------NATPKEHRVIDAKNIFTGH--TAVVEDV---AWHLLHESLFGSV  250 (430)
T ss_dssp             SC----E-----------------EEEET-------TSCCBGGGEEECSEEECCC--SSCEEEE---EECSSCTTEEEEE
T ss_pred             Ce----E-----------------EEEeC-------CCCCCCCceeccceeecCC--CCCEeee---EEeCCCCCEEEEE
Confidence            66    9                 99998       542211    111223389  9999999   9999 56777888


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.|+.|+  +|++.....                                        ...     ...+..|...|+++
T Consensus       251 ~~dg~i~--i~d~~~~~~----------------------------------------~~~-----~~~~~~~~~~v~~i  283 (430)
T 2xyi_A          251 ADDQKLM--IWDTRNNNT----------------------------------------SKP-----SHTVDAHTAEVNCL  283 (430)
T ss_dssp             ETTSEEE--EEETTCSCS----------------------------------------SSC-----SEEEECCSSCEEEE
T ss_pred             eCCCeEE--EEECCCCCC----------------------------------------Ccc-----eeEeecCCCCeEEE
Confidence            8888888  887765210                                        011     22234688899999


Q ss_pred             EEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        327 TVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       327 ~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      +|+|+++ +|++++.||.|++||++....++..+..|..                                         
T Consensus       284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~-----------------------------------------  322 (430)
T 2xyi_A          284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD-----------------------------------------  322 (430)
T ss_dssp             EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-----------------------------------------
T ss_pred             EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-----------------------------------------
Confidence            9999887 7889999999999999844555555554433                                         


Q ss_pred             CCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCC--------------ceeeeEeecCCcceEEEEEecCCC-EE
Q psy10942        406 DENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTD--------------YVCLKSLEGHDASVLRCHFINKGT-QI  469 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~-~l  469 (537)
                              .|.+++|+|+++ +|++++.|+.|++||+..              .+.+..+.+|...|++++|+|+++ +|
T Consensus       323 --------~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l  394 (430)
T 2xyi_A          323 --------EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII  394 (430)
T ss_dssp             --------CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred             --------CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence                    788899999884 799999999999999987              366778888999999999999999 99


Q ss_pred             EEEeCCCcEEEEECCCC
Q psy10942        470 VSTGADGLLKLWSIKTS  486 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~  486 (537)
                      ++++.||.|++|++...
T Consensus       395 ~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          395 CSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEETTSEEEEEEECHH
T ss_pred             EEEECCCCEEEeEcccc
Confidence            99999999999998653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.8e-30  Score=240.68  Aligned_cols=273  Identities=9%  Similarity=-0.027  Sum_probs=193.9

Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccccee
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV  182 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~  182 (537)
                      .+.+++.+|++|+.|+.|++||+.+           ++.+..+.  ...|.++.|+| .   +++++.++.    +    
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~-----------~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~----i----   97 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKD-----------SKTITTIT--TPNPRTGGEHP-A---IISRGPCNR----L----   97 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESS-----------SSCEEEEE--EECCCTTCCCC-S---EEEECSTTE----E----
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCC-----------CcEEEEEe--cCCceeeeeCC-c---eEEecCCCe----E----
Confidence            4457899999999999999999998           56666665  46689999994 3   777777766    8    


Q ss_pred             ecccCCCcchhhHHHHHHHHHhh--hcccccccccccccccCCCcCeEEEEeccCccc--CCCeeeeccCCCcceecccc
Q psy10942        183 KLGANRSHNEWFDKTFERILEAK--FKQSSSQQKHNTERLGRDELKTVTLLERGKTVK--EEDLFPRQSMEPSTLEELEK  258 (537)
Q Consensus       183 ~~~~~~~~~~~~~~~wd~~~~~~--~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~--~~~~l~~~~~d~~i~~~iw~  258 (537)
                                   ++|+......  ...+.+.. . ....+|  ...|.++   +|+|  +++++++++.|+.++  +|+
T Consensus        98 -------------~~w~~~~~~~~~~~~~~~~~-~-~~~~~~--~~~v~~~---~~~~~~~~~~l~s~s~dg~i~--~wd  155 (343)
T 3lrv_A           98 -------------LLLYPGNQITILDSKTNKVL-R-EIEVDS--ANEIIYM---YGHNEVNTEYFIWADNRGTIG--FQS  155 (343)
T ss_dssp             -------------EEEETTTEEEEEETTTCCEE-E-EEECCC--SSCEEEE---ECCC---CCEEEEEETTCCEE--EEE
T ss_pred             -------------EEEEccCceEEeecCCccee-E-EeecCC--CCCEEEE---EcCCCCCCCEEEEEeCCCcEE--EEE
Confidence                         8887600000  00122211 1 111256  6889999   9999  999999999999888  888


Q ss_pred             ccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE
Q psy10942        259 RKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG  338 (537)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  338 (537)
                      +..+.                                .+.+.               ...|...|.+++|+|++++|++|
T Consensus       156 ~~~~~--------------------------------~~~~~---------------~~~~~~~i~~~~~~pdg~~lasg  188 (343)
T 3lrv_A          156 YEDDS--------------------------------QYIVH---------------SAKSDVEYSSGVLHKDSLLLALY  188 (343)
T ss_dssp             SSSSC--------------------------------EEEEE---------------CCCSSCCCCEEEECTTSCEEEEE
T ss_pred             CCCCc--------------------------------EEEEE---------------ecCCCCceEEEEECCCCCEEEEE
Confidence            87631                                01110               12344568999999999999999


Q ss_pred             eCCCcEEEEEccCCceeeEEEEe-cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942        339 SLDKTVKVWSTTGGLKLLNVLRG-HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF  417 (537)
Q Consensus       339 ~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~  417 (537)
                      +.||.|++||++........+.. |..                                                 .|.+
T Consensus       189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~-------------------------------------------------~v~~  219 (343)
T 3lrv_A          189 SPDGILDVYNLSSPDQASSRFPVDEEA-------------------------------------------------KIKE  219 (343)
T ss_dssp             CTTSCEEEEESSCTTSCCEECCCCTTS-------------------------------------------------CEEE
T ss_pred             cCCCEEEEEECCCCCCCccEEeccCCC-------------------------------------------------CEEE
Confidence            99999999999833222133333 322                                                 8899


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceE--EEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEE
Q psy10942        418 VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVL--RCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVST  491 (537)
Q Consensus       418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~  491 (537)
                      ++|+|++.+|++++. +.|++||+++++.+..+..   |...+.  +++|+|++++|++++. |+.+++|++.+......
T Consensus       220 l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~  298 (343)
T 3lrv_A          220 VKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT  298 (343)
T ss_dssp             EEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred             EEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence            999999999999994 5999999999877655543   444444  6999999999999998 99999999976543333


Q ss_pred             ecCCccceeccCCCCCCccccccceeeec---CCCEEEEEeCCCCEEeC
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLCSR---NSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~---~~~~l~s~~~dg~i~vW  537 (537)
                      .    .++           ..+   .|++   +.+.|++++.||.++++
T Consensus       299 ~----~~~-----------~~~---~~~~~~~~~~~l~~~~~d~~~~~~  329 (343)
T 3lrv_A          299 K----DEE-----------SAL---CLQSDTADFTDMDVVCGDGGIAAI  329 (343)
T ss_dssp             E----EEE-----------EEC---CC----CCCCEEEEEEETTEEEEE
T ss_pred             e----cCc-----------eeE---ecCccccccceeEEEecCCceEEE
Confidence            2    345           566   8888   88899999989888764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.3e-30  Score=267.66  Aligned_cols=249  Identities=17%  Similarity=0.224  Sum_probs=198.4

Q ss_pred             CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC-CccEEEeeecccc
Q psy10942         96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE-DSHIVVASNEYLN  174 (537)
Q Consensus        96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~~~~~  174 (537)
                      .+.|.+++|+|++++|++|+.||.|++||+.++.         ......+.+|.+.|.+++|+|+. ++.+++++.++. 
T Consensus         9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~-   78 (753)
T 3jro_A            9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK-   78 (753)
T ss_dssp             CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC-
T ss_pred             cceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe-
Confidence            3689999999999999999999999999998411         57778899999999999999432 778888887777 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCcccC--CCeeeeccC
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSM  248 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~  248 (537)
                         |                 ++||+       .+++  ..  +.     +|  ...|.++   +|+|+  ++++++++.
T Consensus        79 ---I-----------------~vwd~-------~~~~~~~~~~~~-----~h--~~~V~~v---~~sp~~~~~~l~sgs~  121 (753)
T 3jro_A           79 ---V-----------------LIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEYGPLLLVASS  121 (753)
T ss_dssp             ---E-----------------EEEEE-------ETTEEEEEEEEC-----CC--SSCEEEE---EECCGGGCSEEEEEET
T ss_pred             ---E-----------------EEEEC-------CCCccccccccc-----CC--CCCeEEE---EECCCCCCCEEEEEeC
Confidence               9                 99999       7664  22  55     89  9999999   99999  889999999


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      ||.|+  +|++......                                         .     ......|...|.+++|
T Consensus       122 dg~I~--vwdl~~~~~~-----------------------------------------~-----~~~~~~~~~~v~~l~~  153 (753)
T 3jro_A          122 DGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAHAIGVNSASW  153 (753)
T ss_dssp             TSEEE--EEECCSSSCC-----------------------------------------C-----CEEEECCSSCEEEEEE
T ss_pred             CCcEE--EEEeecCCCc-----------------------------------------c-----eeEeecCCCceEEEEe
Confidence            88888  8888763100                                         0     1123467888999999


Q ss_pred             cC-------------CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        329 SP-------------NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       329 s~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      +|             +++++++++.||.|++||++......                             .....+..|.
T Consensus       154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------------------------~~~~~~~~h~  204 (753)
T 3jro_A          154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------VLESTLEGHS  204 (753)
T ss_dssp             CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE-----------------------------EEEEEECCCS
T ss_pred             cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc-----------------------------eeeeeecCCC
Confidence            99             47888888888888888887322110                             1122233333


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCcEEEEECCCce-----eeeEeecCCcceEEEEEecCCC
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDATIKLWCLTDYV-----CLKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~  467 (537)
                      .                 .|.+++|+|+   +++|++++.||.|++||+.+++     .......|...|++++|+|+++
T Consensus       205 ~-----------------~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~  267 (753)
T 3jro_A          205 D-----------------WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN  267 (753)
T ss_dssp             S-----------------CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC
T ss_pred             C-----------------cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC
Confidence            3                 7888999999   8999999999999999998864     3444456888999999999999


Q ss_pred             EEEEEeCCCcEEEEECCC
Q psy10942        468 QIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       468 ~l~s~~~dg~v~vwd~~~  485 (537)
                      +|++++.||.|++|++..
T Consensus       268 ~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          268 VLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             CEEEECSSSCEECCBCCS
T ss_pred             EEEEEcCCCEEEEEecCC
Confidence            999999999999999874

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=8.1e-29  Score=256.10  Aligned_cols=247  Identities=16%  Similarity=0.155  Sum_probs=191.1

Q ss_pred             ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      .+|  .+.|.++   +|+|++++|++|+.||.|+  +|++..+.                                    
T Consensus         6 ~gH--~~~V~~l---~~s~dg~~latg~~dg~I~--vwd~~~~~------------------------------------   42 (753)
T 3jro_A            6 NAH--NELIHDA---VLDYYGKRLATCSSDKTIK--IFEVEGET------------------------------------   42 (753)
T ss_dssp             --C--CCCEEEE---CCCSSSCCEEEEETTTEEE--EEEEETTE------------------------------------
T ss_pred             ccC--cceeEEE---EECCCCCeEEEEECCCcEE--EEecCCCC------------------------------------
Confidence            399  9999999   9999999999999999999  99876421                                    


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCc-----------eeeEEEEecCC--
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGL-----------KLLNVLRGHKK--  364 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~--  364 (537)
                           ...     ...+.+|..+|.+++|+|+  +++|++++.||.|++||+....           ..+..+..+++  
T Consensus        43 -----~~~-----~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  112 (753)
T 3jro_A           43 -----HKL-----IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY  112 (753)
T ss_dssp             -----EEE-----EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred             -----Ccc-----ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence                 000     2234578899999999988  9999999999999999998432           12344555666  


Q ss_pred             CCEEEEEcCCCcEEEEECCCCe--eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942        365 GTQIVSTGADGLLKLWSIKTST--CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT  442 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~  442 (537)
                      +..+++++.||.|++||++++.  ....+..|...+.++.++|....    ........++++++++|+.||.|++||+.
T Consensus       113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~----~~~~~~~~~d~~~l~sgs~dg~I~iwd~~  188 (753)
T 3jro_A          113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE----EDGEHNGTKESRKFVTGGADNLVKIWKYN  188 (753)
T ss_dssp             CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------------CGGGCCEEEEETTSCEEEEEEE
T ss_pred             CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc----cccccccCCCCCEEEEEECCCeEEEEecc
Confidence            8899999999999999998873  33445566664444444442110    00011112368999999999999999998


Q ss_pred             Cc----eeeeEeecCCcceEEEEEecC---CCEEEEEeCCCcEEEEECCCCe-----eEEEecCCccceeccCCCCCCcc
Q psy10942        443 DY----VCLKSLEGHDASVLRCHFINK---GTQIVSTGADGLLKLWSIKTST-----CVSTFDKHALKIRNSDSENDHKG  510 (537)
Q Consensus       443 ~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~v~vwd~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~  510 (537)
                      ++    .....+.+|...|++++|+|+   +++|++++.||.|++||+.+++     .......|...+           
T Consensus       189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v-----------  257 (753)
T 3jro_A          189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-----------  257 (753)
T ss_dssp             TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC-----------
T ss_pred             CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce-----------
Confidence            76    667788899999999999999   8999999999999999998864     233334577777           


Q ss_pred             ccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        511 FGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       511 ~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++   +|+|+|++|++++.||.|++|
T Consensus       258 ~~l---~~spdg~~l~s~s~Dg~I~vw  281 (753)
T 3jro_A          258 WRA---SWSLSGNVLALSGGDNKVTLW  281 (753)
T ss_dssp             CCE---EECTTTCCEEEECSSSCEECC
T ss_pred             EEE---EEcCCCCEEEEEcCCCEEEEE
Confidence            888   999999999999999999999

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=1e-29  Score=242.73  Aligned_cols=285  Identities=9%  Similarity=-0.032  Sum_probs=180.6

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc-------CCCccEEEee
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG-------EEDSHIVVAS  169 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~~~~  169 (537)
                      .......+++++.+||+++.|++|+|||..++..      ........+.+|.+.|.+++|+|       .++++|++++
T Consensus        90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s  163 (393)
T 4gq1_A           90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI------ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG  163 (393)
T ss_dssp             -------CCEEEEEEEEEETTSCEEEEEEETTEE------EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred             CCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc------ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence            3455566788999999999999999999988311      00123445789999999999984       2678888888


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC-Ceeeec
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQ  246 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~  246 (537)
                      .|+.    |                 ++||+       .+....  +.     +|  ..+|.++   +|+|++ .+|+++
T Consensus       164 ~D~t----v-----------------~~Wd~-------~~~~~~~~~~-----~~--~~~v~~v---~~~p~~~~~l~~~  205 (393)
T 4gq1_A          164 DDCT----L-----------------IIWRL-------TDEGPILAGY-----PL--SSPGISV---QFRPSNPNQLIVG  205 (393)
T ss_dssp             TTSE----E-----------------EEEEE-------ETTEEEEEEE-----EC--SSCEEEE---EEETTEEEEEEEE
T ss_pred             CCCe----E-----------------EEEEC-------CCCceeeeec-----CC--CCCcEEE---EECCCCCceEEec
Confidence            8877    9                 99999       766555  56     78  8999999   999987 489999


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      +.|++|+  +||+..+......         ..+....        .+..+ -++......     .....+|...+.++
T Consensus       206 ~~d~~v~--~wd~~t~~~~~~~---------~~~~~~~--------~~~~~-s~~~~~~~~-----~~~~~~~~~~v~~v  260 (393)
T 4gq1_A          206 ERNGNIR--IFDWTLNLSAEEN---------SQTELVK--------NPWLL-TLNTLPLVN-----TCHSSGIASSLANV  260 (393)
T ss_dssp             ETTSEEE--EEETTCCC-------------------CS--------CCCSE-EEESGGGC-----------CCSSSCSEE
T ss_pred             CCCCEEE--EEECCCCcccccc---------cccCCcc--------cceEE-eccccccee-----eeecccccccceee
Confidence            9999999  9999875322111         1111100        00000 011110000     12235678889999


Q ss_pred             EEc-CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942        327 TVS-PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK  405 (537)
Q Consensus       327 ~~s-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  405 (537)
                      .|+ |+++.+++++.|+.+++||+. ..+....+..+..             .++.............+.          
T Consensus       261 ~~~~~dg~~l~s~s~d~~i~vwd~~-~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~----------  316 (393)
T 4gq1_A          261 RWIGSDGSGILAMCKSGAWLRWNLF-ANNDYNEISDSTM-------------KLGPKNLLPNVQGISLFP----------  316 (393)
T ss_dssp             EEETTTTCEEEEECTTSEEEEEEC---------------------------------CCSCSEEEECSSC----------
T ss_pred             eeecCCCCEEEEEeCCCCEEEEECc-cCCCCceEeeecC-------------ccccEEEccccccccccC----------
Confidence            987 799999999999999999998 4444443333321             111111111111111111          


Q ss_pred             CCCceEEeeeeEEEEcC--CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        406 DENQIITGGVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       406 ~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                              ......++|  ++.++++|+.||.|++||+.+++....+..|..+|.+++|+|||++||+++.+| +.+|.+
T Consensus       317 --------~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          317 --------SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             --------CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred             --------cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence                    122233443  345677888899999999999999888888999999999999999999999776 666654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.2e-29  Score=235.06  Aligned_cols=233  Identities=9%  Similarity=-0.010  Sum_probs=174.5

Q ss_pred             CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC
Q psy10942        160 EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE  239 (537)
Q Consensus       160 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~  239 (537)
                      .++..+++++.++.    |                 ++||+       .+++....     -.  ...|.++   .++|+
T Consensus        46 ~d~~~l~sg~~Dg~----v-----------------~iwd~-------~~~~~~~~-----~~--~~~v~~~---~~~~~   87 (343)
T 3lrv_A           46 YDKWVCMCRCEDGA----L-----------------HFTQL-------KDSKTITT-----IT--TPNPRTG---GEHPA   87 (343)
T ss_dssp             EEEEEEEEEEETTE----E-----------------EEEEE-------SSSSCEEE-----EE--EECCCTT---CCCCS
T ss_pred             CCCCEEEEECCCCc----E-----------------EEEEC-------CCCcEEEE-----Ee--cCCceee---eeCCc
Confidence            45566666666666    7                 77777       66555522     11  3456666   67776


Q ss_pred             CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942        240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH  319 (537)
Q Consensus       240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~  319 (537)
                         +++++.|+.++  +|+...                                  .+.+|+..+++...    .....|
T Consensus        88 ---~~s~s~D~~i~--~w~~~~----------------------------------~~~~~~~~~~~~~~----~~~~~~  124 (343)
T 3lrv_A           88 ---IISRGPCNRLL--LLYPGN----------------------------------QITILDSKTNKVLR----EIEVDS  124 (343)
T ss_dssp             ---EEEECSTTEEE--EEETTT----------------------------------EEEEEETTTCCEEE----EEECCC
T ss_pred             ---eEEecCCCeEE--EEEccC----------------------------------ceEEeecCCcceeE----EeecCC
Confidence               77777777777  777654                                  45667777765432    223467


Q ss_pred             CCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        320 EKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       320 ~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      ...|.+++|+|  +++++++++.|+.|++||++ ..+.+.....+.                               .. 
T Consensus       125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~-------------------------------~~-  171 (343)
T 3lrv_A          125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVHSAKS-------------------------------DV-  171 (343)
T ss_dssp             SSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEECCCS-------------------------------SC-
T ss_pred             CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEEecCC-------------------------------CC-
Confidence            78999999999  99999999999999999998 444333221111                               11 


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee-eEeec-CCcceEEEEEecCCCEEEEEeCC
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL-KSLEG-HDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                                      .+.+++|+|++++|++|+.||.|++||+++++.+ ..+.. |.++|++++|+|++.+|++++ |
T Consensus       172 ----------------~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~  234 (343)
T 3lrv_A          172 ----------------EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D  234 (343)
T ss_dssp             ----------------CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S
T ss_pred             ----------------ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C
Confidence                            6888999999999999999999999999998887 78888 999999999999999999999 4


Q ss_pred             CcEEEEECCCCeeEEEecC---CccceeccCCCCCCccc--cccceeeecCCCEEEEEeC-CCCEEeC
Q psy10942        476 GLLKLWSIKTSTCVSTFDK---HALKIRNSDSENDHKGF--GLPRQLCSRNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~--~~~~~~~s~~~~~l~s~~~-dg~i~vW  537 (537)
                      +.|++||+++++.+..+..   |...+           .  ++   +|+|+|++|++++. |+.++||
T Consensus       235 ~~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~g~~l~~~s~~d~~i~v~  288 (343)
T 3lrv_A          235 QTVVCFDLRKDVGTLAYPTYTIPEFKT-----------GTVTY---DIDDSGKNMIAYSNESNSLTIY  288 (343)
T ss_dssp             SBEEEEETTSSTTCBSSCCCBC----------------CCEEE---EECTTSSEEEEEETTTTEEEEE
T ss_pred             CeEEEEEcCCCCcceeecccccccccc-----------cceEE---EECCCCCEEEEecCCCCcEEEE
Confidence            5999999999877665554   33344           3  36   99999999999988 9999998

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.96  E-value=2.2e-27  Score=234.43  Aligned_cols=317  Identities=13%  Similarity=0.057  Sum_probs=227.0

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEec--ccccCcccccccccceeE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRL--NSETGLEERPNKILKFRK  143 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~  143 (537)
                      ++.++++.+.++.|.+||..+++++.++.....+..++|+|||++|++++.|+.|++||+  .+           .+.+.
T Consensus       148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-----------~~~~~  216 (543)
T 1nir_A          148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE-----------PTKVA  216 (543)
T ss_dssp             GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSS-----------CEEEE
T ss_pred             CCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCC-----------CcEEE
Confidence            668889999999999999999999988885555999999999999999999999999999  66           67777


Q ss_pred             EeecchhhhhhhhcccC----CCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        144 QFVGFSDEILDIALLGE----EDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~----~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      ++..+ ..+..++|+ +    ++++++++.. ++.    |                 .+||.       .+.+++  +..
T Consensus       217 ~i~~g-~~p~~va~s-p~~~~dg~~l~v~~~~~~~----v-----------------~v~D~-------~t~~~~~~i~~  266 (543)
T 1nir_A          217 EIKIG-IEARSVESS-KFKGYEDRYTIAGAYWPPQ----F-----------------AIMDG-------ETLEPKQIVST  266 (543)
T ss_dssp             EEECC-SEEEEEEEC-CSTTCTTTEEEEEEEESSE----E-----------------EEEET-------TTCCEEEEEEC
T ss_pred             EEecC-CCcceEEeC-CCcCCCCCEEEEEEccCCe----E-----------------EEEec-------cccccceeecc
Confidence            77744 447899999 6    8888877764 444    8                 88998       766655  320


Q ss_pred             cc--cc---cCCCcCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE
Q psy10942        217 TE--RL---GRDELKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS  290 (537)
Q Consensus       217 ~~--~~---~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~  290 (537)
                      ..  ..   .|. ...+.++   .++|++..+ ++...++.|.  +|+...                             
T Consensus       267 ~g~~~~~~~~~~-~~~v~~i---~~s~~~~~~~vs~~~~g~i~--vvd~~~-----------------------------  311 (543)
T 1nir_A          267 RGMTVDTQTYHP-EPRVAAI---IASHEHPEFIVNVKETGKVL--LVNYKD-----------------------------  311 (543)
T ss_dssp             CEECSSSCCEES-CCCEEEE---EECSSSSEEEEEETTTTEEE--EEECTT-----------------------------
T ss_pred             cCcccCcccccc-CCceEEE---EECCCCCEEEEEECCCCeEE--EEEecC-----------------------------
Confidence            00  00   020 2257777   777766443 3444555555  555544                             


Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                                    .+.+.   ... ..+...+.+++|+|+|++|++++ .++.|.+||+. .++++..+.....     
T Consensus       312 --------------~~~l~---~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~-tg~l~~~i~~g~~-----  367 (543)
T 1nir_A          312 --------------IDNLT---VTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK-DRRLSALVDVGKT-----  367 (543)
T ss_dssp             --------------SSSCE---EEE-EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSS-----
T ss_pred             --------------CCcce---eEE-eccCcCccCceECCCCCEEEEEecCCCeEEEEECC-CCeEEEeeccCCC-----
Confidence                          22111   000 12334567889999999877655 57899999998 5666655543110     


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEe-CCCcEEEEECCC----
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSS-GDATIKLWCLTD----  443 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~-~dg~i~i~d~~~----  443 (537)
                                             .|..                 ....+ ++|+ +..++++. .|++|.+||+.+    
T Consensus       368 -----------------------ph~g-----------------~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~  406 (543)
T 1nir_A          368 -----------------------PHPG-----------------RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP  406 (543)
T ss_dssp             -----------------------BCCT-----------------TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred             -----------------------CCCC-----------------CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence                                   0110                 11111 4566 56667765 579999999988    


Q ss_pred             ---ceeeeEeecCCcceEEEEEecCCCEEEEEe-------CCCcEEEEECCCCeeE-EEe--------cCCccceeccCC
Q psy10942        444 ---YVCLKSLEGHDASVLRCHFINKGTQIVSTG-------ADGLLKLWSIKTSTCV-STF--------DKHALKIRNSDS  504 (537)
Q Consensus       444 ---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~dg~v~vwd~~~~~~~-~~~--------~~~~~~i~~~~~  504 (537)
                         ++.++++.+|.+.+..++++|++++|++++       .+++|.+||+.+++.. ..+        ..+...+     
T Consensus       407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~-----  481 (543)
T 1nir_A          407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRV-----  481 (543)
T ss_dssp             TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEE-----
T ss_pred             hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCce-----
Confidence               899999999988899999999999999987       2679999999998876 443        2344556     


Q ss_pred             CCCCccccccceeeecCCCEEEEEe-----CCCCEEeC
Q psy10942        505 ENDHKGFGLPRQLCSRNSDCEYRGG-----WSPQVVVY  537 (537)
Q Consensus       505 ~~~~~~~~~~~~~~s~~~~~l~s~~-----~dg~i~vW  537 (537)
                            ..+   .|+|||+.|+++.     .|+.|.||
T Consensus       482 ------~~~---~~~~~g~~~~~s~~~~~~~~~~i~v~  510 (543)
T 1nir_A          482 ------VQP---EYNKRGDEVWFSVWNGKNDSSALVVV  510 (543)
T ss_dssp             ------EEE---EECSSSSEEEEEEECCTTSCCEEEEE
T ss_pred             ------Eec---cCCCCCCEEEEEeecCCCCCCeEEEE
Confidence                  777   9999999998763     47889887

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=3e-27  Score=226.80  Aligned_cols=293  Identities=12%  Similarity=-0.006  Sum_probs=213.8

Q ss_pred             CcEEEEEeC----ccc----eEEeeec--cceehhhh--cCCC-cceEEEEEec--------------cccEEEEEeCC-
Q psy10942         66 GKTFVLAGG----EKS----LLHYYET--SAVKELYQ--HGLS-SPLVRIVRSS--------------VKRMYAVVTAD-  117 (537)
Q Consensus        66 ~~~~~~~~~----~~~----~i~~wd~--~~~~~~~~--~~~~-~~v~~~~~s~--------------~~~~la~~~~d-  117 (537)
                      +..++++++    .+|    .+++||+  .+++++..  +..+ ..+..+++++              .+..++.++.+ 
T Consensus        74 g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~  153 (415)
T 2hqs_A           74 GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN  153 (415)
T ss_dssp             TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECS
T ss_pred             CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecC
Confidence            556776765    456    8999999  88887633  4433 4566666654              15666666654 


Q ss_pred             -----ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcch
Q psy10942        118 -----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNE  192 (537)
Q Consensus       118 -----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~  192 (537)
                           +.|++||+++            ...+.+.+|...+.+++|+ |+++.|++++.+.. ...|              
T Consensus       154 ~~~~~~~i~i~d~~g------------~~~~~l~~~~~~v~~~~~S-pdg~~la~~s~~~~-~~~i--------------  205 (415)
T 2hqs_A          154 GGQFPYELRVSDYDG------------YNQFVVHRSPQPLMSPAWS-PDGSKLAYVTFESG-RSAL--------------  205 (415)
T ss_dssp             SSSCCEEEEEEETTS------------CSCEEEEEESSCEEEEEEC-TTSSEEEEEECTTS-SCEE--------------
T ss_pred             CCCccceEEEEcCCC------------CCCEEEeCCCCcceeeEEc-CCCCEEEEEEecCC-CcEE--------------
Confidence                 7999999976            3356778899999999999 78888888776541 1338              


Q ss_pred             hhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCccccccc
Q psy10942        193 WFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIF  270 (537)
Q Consensus       193 ~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~  270 (537)
                         ++||+       .+++.. +.     .|  ...+.++   +|+|||++|+ +++.++..                  
T Consensus       206 ---~~~d~-------~tg~~~~l~-----~~--~~~~~~~---~~spdg~~la~~~~~~g~~------------------  247 (415)
T 2hqs_A          206 ---VIQTL-------ANGAVRQVA-----SF--PRHNGAP---AFSPDGSKLAFALSKTGSL------------------  247 (415)
T ss_dssp             ---EEEET-------TTCCEEEEE-----CC--SSCEEEE---EECTTSSEEEEEECTTSSC------------------
T ss_pred             ---EEEEC-------CCCcEEEee-----cC--CCcccCE---EEcCCCCEEEEEEecCCCc------------------
Confidence               99999       777766 66     78  8899999   9999999887 55544432                  


Q ss_pred             ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEE
Q psy10942        271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DK--TVKVW  347 (537)
Q Consensus       271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~--~i~i~  347 (537)
                                               .|++||+.+++.      ..+..|...+.+++|+|||+.|++++. ++  .|++|
T Consensus       248 -------------------------~i~~~d~~~~~~------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          248 -------------------------NLYVMDLASGQI------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             -------------------------EEEEEETTTCCE------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             -------------------------eEEEEECCCCCE------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence                                     355556555442      223456778999999999999998876 34  45555


Q ss_pred             EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942        348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL  427 (537)
Q Consensus       348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  427 (537)
                      |+. +.+. ..+.                                .+..                 .+.+++|+|||++|
T Consensus       297 d~~-~~~~-~~l~--------------------------------~~~~-----------------~~~~~~~spdG~~l  325 (415)
T 2hqs_A          297 NIN-GGAP-QRIT--------------------------------WEGS-----------------QNQDADVSSDGKFM  325 (415)
T ss_dssp             ETT-SSCC-EECC--------------------------------CSSS-----------------EEEEEEECTTSSEE
T ss_pred             ECC-CCCE-EEEe--------------------------------cCCC-----------------cccCeEECCCCCEE
Confidence            665 2211 1111                                1111                 56778999999999


Q ss_pred             EEEeCC---CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEecCCccceec
Q psy10942        428 ISSSGD---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIRN  501 (537)
Q Consensus       428 ~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~i~~  501 (537)
                      ++++.+   ..|++||+.+++.. .+..|. .+.+++|+|+|++|++++.++   .|++||+. ++....+..|.+.|  
T Consensus       326 ~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v--  400 (415)
T 2hqs_A          326 VMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQV--  400 (415)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEE--
T ss_pred             EEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCC--
Confidence            988764   58999999988764 455554 899999999999999988877   79999986 66678899999999  


Q ss_pred             cCCCCCCccccccceeeecCCC
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSD  523 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~  523 (537)
                               .++   +|+|...
T Consensus       401 ---------~~~---~~~~~~~  410 (415)
T 2hqs_A          401 ---------KFP---AWSPYLH  410 (415)
T ss_dssp             ---------EEE---EECCCCC
T ss_pred             ---------cCC---ccccccc
Confidence                     999   9999754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=2.1e-26  Score=220.92  Aligned_cols=308  Identities=14%  Similarity=0.009  Sum_probs=206.5

Q ss_pred             eeeeeeeccCCcceEEEec----Ccc----eEEEEEc--Cccceeee--ec-cccccceeeeEeecC-------cccccc
Q psy10942          5 VTCFDVIPQITSEFSVHCG----RDK----VLFTWDL--SSRKQLRS--YP-AYESLETCAVFHLSD-------ETESKS   64 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~----~~g----~v~iwd~--~~~~~~~~--~~-~~~~~~~~~~~~~~~-------~~~~~~   64 (537)
                      |...+|.+ ...+++++|+    .+|    .|++||+  .+++++..  +. +...+..+++  .+.       ......
T Consensus        65 ~~~~~w~~-~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~g~~~~  141 (415)
T 2hqs_A           65 VQPAAWSA-LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGH--TASDEVFEKLTGIKGA  141 (415)
T ss_dssp             CCHHHHHT-TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHH--HHHHHHHHHHHSSCCC
T ss_pred             cCHHHHHh-cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHH--HHHHHHHHHHcCCCCc
Confidence            34445552 2335666775    467    8999999  99987743  33 2333333311  110       000000


Q ss_pred             CCcEEEEEeCc--c---ceEEeeeccceehhhhcC-CCcceEEEEEeccccEEEEEeCCc---eEEEEecccccCccccc
Q psy10942         65 GGKTFVLAGGE--K---SLLHYYETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADH---NISLYRLNSETGLEERP  135 (537)
Q Consensus        65 ~~~~~~~~~~~--~---~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~  135 (537)
                      .+.++++++..  +   +.|++||+..+ ....+. +.+.+.+++|||||++||+++.++   .|++||+.+        
T Consensus       142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t--------  212 (415)
T 2hqs_A          142 FRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN--------  212 (415)
T ss_dssp             TTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------
T ss_pred             CCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC--------
Confidence            02233443332  2   79999999754 444444 446899999999999999999875   899999998        


Q ss_pred             ccccceeEEeecchhhhhhhhcccCCCccEEEe-eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-
Q psy10942        136 NKILKFRKQFVGFSDEILDIALLGEEDSHIVVA-SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-  213 (537)
Q Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-  213 (537)
                         ++.. .+..|...+.+++|+ |+++.|++. +.++.  ..|                 ++||+       .+++.. 
T Consensus       213 ---g~~~-~l~~~~~~~~~~~~s-pdg~~la~~~~~~g~--~~i-----------------~~~d~-------~~~~~~~  261 (415)
T 2hqs_A          213 ---GAVR-QVASFPRHNGAPAFS-PDGSKLAFALSKTGS--LNL-----------------YVMDL-------ASGQIRQ  261 (415)
T ss_dssp             ---CCEE-EEECCSSCEEEEEEC-TTSSEEEEEECTTSS--CEE-----------------EEEET-------TTCCEEE
T ss_pred             ---CcEE-EeecCCCcccCEEEc-CCCCEEEEEEecCCC--ceE-----------------EEEEC-------CCCCEEe
Confidence               4443 567788889999999 777777643 33332  347                 88898       776665 


Q ss_pred             ccccccccCCCcCeEEEEeccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe
Q psy10942        214 KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS  292 (537)
Q Consensus       214 l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~  292 (537)
                      +.     .|  ...+.++   +|+|||++|++++. ++...                                       
T Consensus       262 l~-----~~--~~~~~~~---~~spdg~~l~~~s~~~g~~~---------------------------------------  292 (415)
T 2hqs_A          262 VT-----DG--RSNNTEP---TWFPDSQNLAFTSDQAGRPQ---------------------------------------  292 (415)
T ss_dssp             CC-----CC--SSCEEEE---EECTTSSEEEEEECTTSSCE---------------------------------------
T ss_pred             Cc-----CC--CCcccce---EECCCCCEEEEEECCCCCcE---------------------------------------
Confidence            66     88  8899999   99999998887765 34333                                       


Q ss_pred             CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                          |++||+.+++.      ..+..+...+.+++|+|+|++|++++.+   ..|++||+.                   
T Consensus       293 ----i~~~d~~~~~~------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~-------------------  343 (415)
T 2hqs_A          293 ----VYKVNINGGAP------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA-------------------  343 (415)
T ss_dssp             ----EEEEETTSSCC------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT-------------------
T ss_pred             ----EEEEECCCCCE------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC-------------------
Confidence                44445444431      1123345678899999999999988764   356666665                   


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC---cEEEEECCCcee
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA---TIKLWCLTDYVC  446 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~  446 (537)
                                    +++.. .+..+.                  .+.+++|+|||++|++++.++   .|++||+. +..
T Consensus       344 --------------~~~~~-~l~~~~------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~  389 (415)
T 2hqs_A          344 --------------TGGVQ-VLSSTF------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRF  389 (415)
T ss_dssp             --------------TCCEE-ECCCSS------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCC
T ss_pred             --------------CCCEE-EecCCC------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCc
Confidence                          22221 111111                  466788999999999888776   79999987 556


Q ss_pred             eeEeecCCcceEEEEEecCCC
Q psy10942        447 LKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~  467 (537)
                      ...+..|.+.|.+++|+|...
T Consensus       390 ~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          390 KARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             EEECCCSSSEEEEEEECCCCC
T ss_pred             EEEeeCCCCCCcCCccccccc
Confidence            778888999999999999643

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.94  E-value=1.1e-25  Score=233.86  Aligned_cols=351  Identities=9%  Similarity=-0.049  Sum_probs=223.2

Q ss_pred             eeeeeeeeccCCcceEEEecC-cc-----eEEEEEcCccceeeeecccc-------------------------ccceee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGR-DK-----VLFTWDLSSRKQLRSYPAYE-------------------------SLETCA   52 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~-~g-----~v~iwd~~~~~~~~~~~~~~-------------------------~~~~~~   52 (537)
                      .|++++||  |||++|++++. ++     .|++||+++++....+....                         .+..+ 
T Consensus        38 ~~~~~~~S--pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-  114 (741)
T 2ecf_A           38 TLMKPKVA--PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY-  114 (741)
T ss_dssp             CCEEEEEC--TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC-
T ss_pred             CCCCceEe--cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee-
Confidence            48899999  89999999987 87     89999999998776554221                         24445 


Q ss_pred             eEeecCccccccCCcEEEEEeCccceEEeeeccce---ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccccc
Q psy10942         53 VFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV---KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSET  129 (537)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~  129 (537)
                       .++|        ++++|++++. +.|++||+.++   +......+...+..++|||||++||+++. +.|++||+.+  
T Consensus       115 -~~Sp--------Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~--  181 (741)
T 2ecf_A          115 -QWSP--------DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS--  181 (741)
T ss_dssp             -EECT--------TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTT--
T ss_pred             -EECC--------CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCC--
Confidence             6688        6677777764 89999999988   44333334468999999999999999875 6899999988  


Q ss_pred             CcccccccccceeEEeecchh----------------hhhhhhcccCCCccEEEeeeccccCCccc-----------cee
Q psy10942        130 GLEERPNKILKFRKQFVGFSD----------------EILDIALLGEEDSHIVVASNEYLNGGDLS-----------GLV  182 (537)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~-----------~~~  182 (537)
                               ++..+....+..                .+..++|+ ||+++|++++.+........           ..+
T Consensus       182 ---------g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~  251 (741)
T 2ecf_A          182 ---------GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ  251 (741)
T ss_dssp             ---------TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred             ---------CCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence                     343333322222                14789999 78888888876542000000           000


Q ss_pred             ecccCCCcch-hhHHHHHHHHHhhhccc-cccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccc
Q psy10942        183 KLGANRSHNE-WFDKTFERILEAKFKQS-SSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKR  259 (537)
Q Consensus       183 ~~~~~~~~~~-~~~~~wd~~~~~~~~~~-~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~  259 (537)
                      .......... .-..+||+       .+ ++.. +..  ...|  ...+..+   +| |||++|++++.++.-       
T Consensus       252 ~~~~~g~~~~~~~l~~~d~-------~~~~~~~~~~~--~~~~--~~~~~~~---~~-pDg~~l~~~~~~~~~-------  309 (741)
T 2ecf_A          252 RYPAAGDANVQVKLGVISP-------AEQAQTQWIDL--GKEQ--DIYLARV---NW-RDPQHLSFQRQSRDQ-------  309 (741)
T ss_dssp             ECCBTTSCCCEEEEEEECS-------STTCCCEEECC--CSCS--SEEEEEE---EE-EETTEEEEEEEETTS-------
T ss_pred             ecCCCCCCCCeeEEEEEEC-------CCCCceEEecC--CCCc--ceEEEEE---Ee-CCCCEEEEEEecccC-------
Confidence            0000000000 00066677       55 5443 210  0136  7788899   99 999988865432110       


Q ss_pred             cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC----CeEEEEEcCCCCEE
Q psy10942        260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK----DINCVTVSPNDKLL  335 (537)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l  335 (537)
                                                       .+..|++||+.+++....     ...+..    .+..++|+|||+++
T Consensus       310 ---------------------------------~~~~i~~~d~~~g~~~~~-----~~~~~~~~~~~~~~~~~spdg~~~  351 (741)
T 2ecf_A          310 ---------------------------------KKLDLVEVTLASNQQRVL-----AHETSPTWVPLHNSLRFLDDGSIL  351 (741)
T ss_dssp             ---------------------------------SEEEEEEEETTTCCEEEE-----EEEECSSCCCCCSCCEECTTSCEE
T ss_pred             ---------------------------------CeEEEEEEECCCCceEEE-----EEcCCCCcCCcCCceEECCCCeEE
Confidence                                             123566666665543211     112211    34578999999999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      ++++.|+.+++|.+..... ...+..                                +..                 .+
T Consensus       352 ~~~~~~g~~~l~~~~~~~~-~~~l~~--------------------------------~~~-----------------~v  381 (741)
T 2ecf_A          352 WSSERTGFQHLYRIDSKGK-AAALTH--------------------------------GNW-----------------SV  381 (741)
T ss_dssp             EEECTTSSCEEEEECSSSC-EEESCC--------------------------------SSS-----------------CE
T ss_pred             EEecCCCccEEEEEcCCCC-eeeeee--------------------------------cce-----------------EE
Confidence            9999999888887752222 222221                                111                 45


Q ss_pred             eEE-EEcCCCCEEEEE-eCCC--cEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCCC
Q psy10942        416 WFV-NFSPLDRILISS-SGDA--TIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKTS  486 (537)
Q Consensus       416 ~~~-~~s~~~~~l~~~-~~dg--~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~~  486 (537)
                      ..+ .|+|+++.|+.. +.++  .+++|++.. +.....+.. ...+..++|+||+++|+....+    ..+.+|+... 
T Consensus       382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~-  459 (741)
T 2ecf_A          382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG-  459 (741)
T ss_dssp             EEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS-
T ss_pred             EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC-
Confidence            555 589999877654 4454  899999864 555666665 5678899999999998876543    4689999754 


Q ss_pred             eeEEEe
Q psy10942        487 TCVSTF  492 (537)
Q Consensus       487 ~~~~~~  492 (537)
                      +.+..+
T Consensus       460 ~~~~~l  465 (741)
T 2ecf_A          460 EKIATL  465 (741)
T ss_dssp             CEEECS
T ss_pred             CeEEEe
Confidence            334444

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.93  E-value=5.4e-25  Score=228.71  Aligned_cols=318  Identities=11%  Similarity=-0.014  Sum_probs=221.1

Q ss_pred             cceEEEEEeccccEEEEEeC-Cc-----eEEEEecccccCcccccccccceeEEeecchh--------------------
Q psy10942         97 SPLVRIVRSSVKRMYAVVTA-DH-----NISLYRLNSETGLEERPNKILKFRKQFVGFSD--------------------  150 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~-d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  150 (537)
                      ..+.+++|||||++|++++. |+     .|++||+.+           ++....+..+..                    
T Consensus        37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (741)
T 2ecf_A           37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-----------GQTRLLVDSKVVLPGTETLSDEEKARRERQRI  105 (741)
T ss_dssp             CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-----------CCEEEEECGGGTC-------------------
T ss_pred             CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-----------CceeEccchhhcccccccccchhhhhhhhhhh
Confidence            57999999999999999998 87     899999998           455555544432                    


Q ss_pred             ----hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc---ccc-ccccccccC
Q psy10942        151 ----EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS---SQQ-KHNTERLGR  222 (537)
Q Consensus       151 ----~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~---~~~-l~~~~~~~h  222 (537)
                          .+.+++|+ |++++|++++. +.    |                 ++||+       .++   ... +.     .|
T Consensus       106 ~~~~~v~~~~~S-pDg~~l~~~~~-~~----i-----------------~~~d~-------~~~~~~~~~~l~-----~~  150 (741)
T 2ecf_A          106 AAMTGIVDYQWS-PDAQRLLFPLG-GE----L-----------------YLYDL-------KQEGKAAVRQLT-----HG  150 (741)
T ss_dssp             -CCEESCCCEEC-TTSSEEEEEET-TE----E-----------------EEEES-------SSCSTTSCCBCC-----CS
T ss_pred             ccccCcceeEEC-CCCCEEEEEeC-Cc----E-----------------EEEEC-------CCCCcceEEEcc-----cC
Confidence                37899999 78888887765 44    8                 99999       776   444 66     77


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                        ...+.++   +|+|||++|+.++. +.|.  +|++.++...          .+..           .. ...+  ..-
T Consensus       151 --~~~~~~~---~~SPDG~~la~~~~-~~i~--~~d~~~g~~~----------~~~~-----------~~-~~~~--~~g  198 (741)
T 2ecf_A          151 --EGFATDA---KLSPKGGFVSFIRG-RNLW--VIDLASGRQM----------QLTA-----------DG-STTI--GNG  198 (741)
T ss_dssp             --SSCEEEE---EECTTSSEEEEEET-TEEE--EEETTTTEEE----------ECCC-----------CC-CSSE--EES
T ss_pred             --Ccccccc---cCCCCCCEEEEEeC-CcEE--EEecCCCCEE----------Eecc-----------CC-ccce--ecc
Confidence              8889999   99999999998874 5788  8888763210          0000           00 0000  000


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEEc
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---------------------------------TVKVWST  349 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---------------------------------~i~i~d~  349 (537)
                      ..        ..........+.+++|+|||++|++++.|+                                 .|++||+
T Consensus       199 ~~--------~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~  270 (741)
T 2ecf_A          199 IA--------EFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP  270 (741)
T ss_dssp             CC--------CHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred             cc--------ceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence            00        000011123357899999999999987765                                 7888998


Q ss_pred             cC-Cc-----------eeeEEEEecCCCCEEEEEcC-----CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        350 TG-GL-----------KLLNVLRGHKKGTQIVSTGA-----DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       350 ~~-~~-----------~~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      .. ..           ..+..+.. ++++.++.+..     +..|++||+.+++....+..+....           +  
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-----------~--  336 (741)
T 2ecf_A          271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW-----------V--  336 (741)
T ss_dssp             STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC-----------C--
T ss_pred             CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc-----------C--
Confidence            74 21           22345566 78888886653     5689999999988766554332100           0  


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEEE-EEecCCCEEEEE-eCCC--cEEEEECCC-C
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLRC-HFINKGTQIVST-GADG--LLKLWSIKT-S  486 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~-~~dg--~v~vwd~~~-~  486 (537)
                      ..+..++|+|||+++++++.+|.+++|.+. +++ ...+..|...+..+ .|+|+++.|+.. +.++  .+++|++.. +
T Consensus       337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g  415 (741)
T 2ecf_A          337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG  415 (741)
T ss_dssp             CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred             CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence            023467899999999999999988888765 345 77777788888887 599999987654 4455  899999864 5


Q ss_pred             eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        487 TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       487 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      +....+.. ...+           ..+   +|||||++|+....
T Consensus       416 ~~~~~l~~-~~~~-----------~~~---~~spdg~~l~~~~~  444 (741)
T 2ecf_A          416 GQPQRLSK-APGM-----------HSA---SFARNASVYVDSWS  444 (741)
T ss_dssp             CCCEECCC-SCSE-----------EEE---EECTTSSEEEEEEE
T ss_pred             CCeeeccc-CCCc-----------eEE---EECCCCCEEEEEec
Confidence            55556654 4455           677   99999999886543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.93  E-value=1.3e-24  Score=224.41  Aligned_cols=329  Identities=13%  Similarity=0.079  Sum_probs=205.5

Q ss_pred             eeeeeeccCCcceEEEecCcceEEEEEcCcccee--eeeccc-----------------cccceeeeEeecCccccccCC
Q psy10942          6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQL--RSYPAY-----------------ESLETCAVFHLSDETESKSGG   66 (537)
Q Consensus         6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~   66 (537)
                      ..+.|+    ++.+++.+.++ | +||+++++.+  ..+...                 ..+..+  .++|        +
T Consensus        29 ~~~~w~----g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~--~~sp--------d   92 (706)
T 2z3z_A           29 VGLQWM----GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRT--LDAG--------R   92 (706)
T ss_dssp             TTCEEE----TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEE--EETT--------T
T ss_pred             CCCcCc----CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeE--EECC--------C
Confidence            345555    34566666677 8 9999999873  333221                 234555  5577        6


Q ss_pred             cEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc-----ccCcccccccccce
Q psy10942         67 KTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS-----ETGLEERPNKILKF  141 (537)
Q Consensus        67 ~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~  141 (537)
                      +.++++ . ++.|++||+.+++........+.+.+++|||||++||++ .++.|++||+.+     ++.           
T Consensus        93 ~~~~~~-~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~-----------  158 (706)
T 2z3z_A           93 GLVVLF-T-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA-----------  158 (706)
T ss_dssp             TEEEEE-E-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC-----------
T ss_pred             CeEEEE-E-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc-----------
Confidence            344444 3 589999999998776666666788999999999999985 679999999987     421           


Q ss_pred             eEEeecchh--------------hhhhhhcccCCCccEEEeeeccc-----------------------------cCCcc
Q psy10942        142 RKQFVGFSD--------------EILDIALLGEEDSHIVVASNEYL-----------------------------NGGDL  178 (537)
Q Consensus       142 ~~~~~~~~~--------------~v~~~~~~~~~~~~l~~~~~~~~-----------------------------~~~~i  178 (537)
                      .+....+..              .+.+++|+ |++++|++++.+..                             ....|
T Consensus       159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S-pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l  237 (706)
T 2z3z_A          159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWS-PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV  237 (706)
T ss_dssp             EESCSCCBTTEEESSCCGGGCTTCCCSEEEC-TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred             EEeccCCCCCeEcccchhhhhcCCCceEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence            111122222              25789999 78888888763321                             00124


Q ss_pred             cceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccc
Q psy10942        179 SGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELE  257 (537)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw  257 (537)
                                       .+||+       .+++.. +.  ....|  ...+.++   +|+|||++|++++.++.-.    
T Consensus       238 -----------------~~~d~-------~~~~~~~~~--~~~~~--~~~~~~~---~~spdg~~l~~~~~~~~~~----  282 (706)
T 2z3z_A          238 -----------------GIYHL-------ATGKTVYLQ--TGEPK--EKFLTNL---SWSPDENILYVAEVNRAQN----  282 (706)
T ss_dssp             -----------------EEEET-------TTTEEEECC--CCSCT--TCEEEEE---EECTTSSEEEEEEECTTSC----
T ss_pred             -----------------EEEEC-------CCCceEeec--cCCCC--ceeEeeE---EEECCCCEEEEEEeCCCCC----
Confidence                             77888       666544 21  01146  6789999   9999999888766543100    


Q ss_pred             cccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--CCCEE
Q psy10942        258 KRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLL  335 (537)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l  335 (537)
                                                          ...|++||+.+++....+...........+.+++|+|  ||+++
T Consensus       283 ------------------------------------~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l  326 (706)
T 2z3z_A          283 ------------------------------------ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI  326 (706)
T ss_dssp             ------------------------------------EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE
T ss_pred             ------------------------------------eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEE
Confidence                                                1234555555542211110000011111245789999  99999


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      +++..|+.+++|.+......+..+..+                                ..                 .+
T Consensus       327 ~~~~~~g~~~l~~~~~~~~~~~~l~~~--------------------------------~~-----------------~v  357 (706)
T 2z3z_A          327 WQSRRDGWNHLYLYDTTGRLIRQVTKG--------------------------------EW-----------------EV  357 (706)
T ss_dssp             EEECTTSSCEEEEEETTSCEEEECCCS--------------------------------SS-----------------CE
T ss_pred             EEEccCCccEEEEEECCCCEEEecCCC--------------------------------Ce-----------------EE
Confidence            999899999998876333333322211                                11                 44


Q ss_pred             eE-EEEcCCCCEEEEEeCC-C----cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10942        416 WF-VNFSPLDRILISSSGD-A----TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKT  485 (537)
Q Consensus       416 ~~-~~~s~~~~~l~~~~~d-g----~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~  485 (537)
                      .. ++|+|+++.|+.++.+ +    .|..||+.+++ ...+. |...+.+++|+|||++|+..+.+    +.|++||+.+
T Consensus       358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~  435 (706)
T 2z3z_A          358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK  435 (706)
T ss_dssp             EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred             EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence            44 7899999887766544 3    67777777765 33444 66779999999999998876543    4699999988


Q ss_pred             Ce
Q psy10942        486 ST  487 (537)
Q Consensus       486 ~~  487 (537)
                      ++
T Consensus       436 ~~  437 (706)
T 2z3z_A          436 GS  437 (706)
T ss_dssp             CE
T ss_pred             Ce
Confidence            87

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=4.9e-25  Score=228.41  Aligned_cols=341  Identities=10%  Similarity=0.012  Sum_probs=215.2

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCc----ceEEEEEeccccEEEEEeCC---------ceEEEEecccccCcc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSS----PLVRIVRSSVKRMYAVVTAD---------HNISLYRLNSETGLE  132 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~----~v~~~~~s~~~~~la~~~~d---------~~i~iwd~~~~~~~~  132 (537)
                      +++++++ +.||.|++||+.+++....+..+.    .|.+++|||||++||+++.+         +.+.+||+.+     
T Consensus        27 dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-----  100 (723)
T 1xfd_A           27 DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH-----  100 (723)
T ss_dssp             SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-----
T ss_pred             CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC-----
Confidence            5566665 679999999999998877777654    49999999999999999864         6788999998     


Q ss_pred             cccccccceeEEe---ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc
Q psy10942        133 ERPNKILKFRKQF---VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS  209 (537)
Q Consensus       133 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~  209 (537)
                            ++. +.+   .+|...+..++|+ |+++.|++++. +.    |                 ++||.       .+
T Consensus       101 ------~~~-~~l~~~~~~~~~~~~~~~S-PdG~~la~~~~-~~----i-----------------~~~~~-------~~  143 (723)
T 1xfd_A          101 ------GDP-QSLDPPEVSNAKLQYAGWG-PKGQQLIFIFE-NN----I-----------------YYCAH-------VG  143 (723)
T ss_dssp             ------CCC-EECCCTTCCSCCCSBCCBC-SSTTCEEEEET-TE----E-----------------EEESS-------SS
T ss_pred             ------Cce-EeccCCccccccccccEEC-CCCCEEEEEEC-Ce----E-----------------EEEEC-------CC
Confidence                  333 233   3444558899999 78888887765 44    8                 89998       76


Q ss_pred             cccc-ccccccccCCCcC------------------eEEEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccccc
Q psy10942        210 SSQQ-KHNTERLGRDELK------------------TVTLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGI  269 (537)
Q Consensus       210 ~~~~-l~~~~~~~h~~~~------------------~v~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~  269 (537)
                      ++.. +..    .+  ..                  .+.++   +|+|||++|++++.+ +.+.  +|++.......   
T Consensus       144 g~~~~~~~----~~--~~~~~~~g~~~~v~~ee~~~~~~~~---~~SpDg~~la~~~~~~~~~~--~~~~~~~~~~~---  209 (723)
T 1xfd_A          144 KQAIRVVS----TG--KEGVIYNGLSDWLYEEEILKTHIAH---WWSPDGTRLAYAAINDSRVP--IMELPTYTGSI---  209 (723)
T ss_dssp             SCCEEEEC----CC--BTTTEEEEECCHHHHHTTSSSSEEE---EECTTSSEEEEEEEECTTSC--EEEECCCSSSS---
T ss_pred             CceEEEec----CC--CCCceECcccceeEEEEeccCcceE---EECCCCCEEEEEEECCCccc--eEEeeccCCcC---
Confidence            6555 220    22  22                  23678   999999999988755 4677  88765422110   


Q ss_pred             cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec-ccccccCCCeEEEEEcCCCCEEEEEeCC----CcE
Q psy10942        270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR-GHKKGHEKDINCVTVSPNDKLLASGSLD----KTV  344 (537)
Q Consensus       270 ~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i  344 (537)
                       .+....+.....+.      ...+..|++||+.+++....+.. .....+...+..++|+|||+++++....    ..|
T Consensus       210 -~~~~~~~~~~~~G~------~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i  282 (723)
T 1xfd_A          210 -YPTVKPYHYPKAGS------ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL  282 (723)
T ss_dssp             -SCCCEEEECCBTTS------CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred             -CCcceeccCCCCCC------CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence             01111111111110      01234899999988764222100 1112246678999999999988766432    356


Q ss_pred             EEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC
Q psy10942        345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD  424 (537)
Q Consensus       345 ~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~  424 (537)
                      ++||+. +++....+..+..                               ..+.             .....++|+|||
T Consensus       283 ~~~d~~-~g~~~~~~~~~~~-------------------------------~~~~-------------~~~~~~~~spdg  317 (723)
T 1xfd_A          283 TLCDAT-TGVCTKKHEDESE-------------------------------AWLH-------------RQNEEPVFSKDG  317 (723)
T ss_dssp             EEEETT-TCCEEEEEEEECS-------------------------------SCCC-------------CCCCCCEECTTS
T ss_pred             EEEeCC-CCcceEEEEeccC-------------------------------CEEe-------------ccCCCceEcCCC
Confidence            666665 3333222221110                               0000             001257899999


Q ss_pred             CEEEE--EeCCC------cEEEEE-CCCce--eeeEeecCCcceEE-EEEecCCCEEEEEeCC---CcEEEEECCCCe--
Q psy10942        425 RILIS--SSGDA------TIKLWC-LTDYV--CLKSLEGHDASVLR-CHFINKGTQIVSTGAD---GLLKLWSIKTST--  487 (537)
Q Consensus       425 ~~l~~--~~~dg------~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~v~vwd~~~~~--  487 (537)
                      +.|+.  ...++      .|.+|| ...++  +...+..+...+.. ++|+|||+.|+..+.+   +.+++|++....  
T Consensus       318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~  397 (723)
T 1xfd_A          318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF  397 (723)
T ss_dssp             CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC
T ss_pred             CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC
Confidence            87765  44566      577777 34443  14555544444554 6999999999876655   789999986432  


Q ss_pred             eEEEecC---CccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        488 CVSTFDK---HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       488 ~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      ....+..   |...+           ..+   +|+|||++|+...
T Consensus       398 ~~~~l~~~~~~~~~~-----------~~~---~~spdg~~l~~~~  428 (723)
T 1xfd_A          398 NRQCLSCDLVENCTY-----------FSA---SFSHSMDFFLLKC  428 (723)
T ss_dssp             CCBCSSTTSSSSCCC-----------CEE---EECTTSSEEEEEC
T ss_pred             CcceecccccCCCCe-----------EEE---EECCCCCEEEEEc
Confidence            2333432   44555           677   9999999888653

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.92  E-value=2.7e-23  Score=214.60  Aligned_cols=337  Identities=13%  Similarity=0.091  Sum_probs=212.4

Q ss_pred             EEEEEeCccceEEeeeccceehh-hhcCC-C-----------------cceEEEEEeccccEEEEEeCCceEEEEecccc
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKEL-YQHGL-S-----------------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSE  128 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~-~~~~~-~-----------------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~  128 (537)
                      .+++ .+.++ | +||+.+++.+ ..+.. .                 ..|.+++|||| ++++.+. ++.|++||+.+ 
T Consensus        37 ~~~~-~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~-  110 (706)
T 2z3z_A           37 NYVF-IEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLA-  110 (706)
T ss_dssp             EEEE-EETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTT-
T ss_pred             eEEE-EeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCC-
Confidence            4444 44466 7 9999999873 22211 1                 35999999999 6666554 59999999988 


Q ss_pred             cCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcc
Q psy10942        129 TGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ  208 (537)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~  208 (537)
                                .+. ..+..+...+.+++|+ |+++.|+++ .++.    |                 ++||+       .
T Consensus       111 ----------~~~-~~l~~~~~~~~~~~~S-pdG~~la~~-~~~~----i-----------------~v~~~-------~  149 (706)
T 2z3z_A          111 ----------RKV-TYLFDTNEETASLDFS-PVGDRVAYV-RNHN----L-----------------YIARG-------G  149 (706)
T ss_dssp             ----------TEE-EEEECCTTCCTTCEEC-TTSSEEEEE-ETTE----E-----------------EEEEC-------B
T ss_pred             ----------Cce-EEccCCcccccCCcCC-CCCCEEEEE-ECCe----E-----------------EEEec-------C
Confidence                      443 3455567779999999 788888774 4555    8                 99998       6


Q ss_pred             c-----cccc-ccccccccCCCcCe--------------EEEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccc
Q psy10942        209 S-----SSQQ-KHNTERLGRDELKT--------------VTLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLF  267 (537)
Q Consensus       209 ~-----~~~~-l~~~~~~~h~~~~~--------------v~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~  267 (537)
                      +     ++.. +..    .+  ...              +.++   .|+|||++|++++.| ..+.  .+..........
T Consensus       150 ~~~~~~g~~~~~~~----~~--~~~~~~g~~~~~ee~~~~~~~---~~SpDg~~la~~~~d~~~~~--~~~~~~~~~~~~  218 (706)
T 2z3z_A          150 KLGEGMSRAIAVTI----DG--TETLVYGQAVHQREFGIEKGT---FWSPKGSCLAFYRMDQSMVK--PTPIVDYHPLEA  218 (706)
T ss_dssp             CTTSCCCCCEESCS----CC--BTTEEESSCCGGGCTTCCCSE---EECTTSSEEEEEEEECTTSC--CEEEEECCSSSC
T ss_pred             cccccCCCcEEecc----CC--CCCeEcccchhhhhcCCCceE---EECCCCCEEEEEEECCCCCc--eEEeeccCCCCC
Confidence            6     5544 220    22  222              4788   999999999988743 3344  433322110000


Q ss_pred             cccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----
Q psy10942        268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-----  342 (537)
Q Consensus       268 ~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----  342 (537)
                      .     ..........      ....+..|++||+.+++...   ......|...+.+++|+|||+.|++++.++     
T Consensus       219 ~-----~~~~~y~~~g------~~~~~~~l~~~d~~~~~~~~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~  284 (706)
T 2z3z_A          219 E-----SKPLYYPMAG------TPSHHVTVGIYHLATGKTVY---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC  284 (706)
T ss_dssp             E-----EEEECCCBTT------SCCCEEEEEEEETTTTEEEE---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred             c-----eEEeeCCCCC------CCCCeeEEEEEECCCCceEe---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence            0     0000000000      01134679999999876422   111235667899999999999999887665     


Q ss_pred             cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC
Q psy10942        343 TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP  422 (537)
Q Consensus       343 ~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~  422 (537)
                      .|++||+.++............                               ..+              ..+..++|+|
T Consensus       285 ~v~~~d~~~g~~~~~~~~~~~~-------------------------------~~~--------------~~~~~~~~sp  319 (706)
T 2z3z_A          285 KVNAYDAETGRFVRTLFVETDK-------------------------------HYV--------------EPLHPLTFLP  319 (706)
T ss_dssp             EEEEEETTTCCEEEEEEEEECS-------------------------------SCC--------------CCCSCCEECT
T ss_pred             EEEEEECCCCceeeEEEEccCC-------------------------------CeE--------------CccCCceeec
Confidence            7777777622122211111100                               000              0235578999


Q ss_pred             --CCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEE-EEEecCCCEEEEEeCC-C----cEEEEECCCCeeEEEec
Q psy10942        423 --LDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLR-CHFINKGTQIVSTGAD-G----LLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       423 --~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d-g----~v~vwd~~~~~~~~~~~  493 (537)
                        ||+++++++.++.+++|++. +++.+..+..|...+.. ++|+|+++.|+.++.+ +    .|+.||+.+++ ...+.
T Consensus       320 ~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~  398 (706)
T 2z3z_A          320 GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT  398 (706)
T ss_dssp             TCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC
T ss_pred             CCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc
Confidence              99999999999999999876 56777788878777877 7999999988766554 4    67777877765 33333


Q ss_pred             CCccceeccCCCCCCccccccceeeecCCCEEEEEeCC----CCEEeC
Q psy10942        494 KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS----PQVVVY  537 (537)
Q Consensus       494 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d----g~i~vW  537 (537)
                       |...+           ..+   +|||||++|+..+.+    +.|.+|
T Consensus       399 -~~~~~-----------~~~---~~spdg~~l~~~~~~~~~p~~i~l~  431 (706)
T 2z3z_A          399 -PESGM-----------HRT---QLSPDGSAIIDIFQSPTVPRKVTVT  431 (706)
T ss_dssp             -CSSSE-----------EEE---EECTTSSEEEEEEECSSCSCEEEEE
T ss_pred             -CCCce-----------EEE---EECCCCCEEEEEecCCCCCcEEEEE
Confidence             55556           777   999999998876443    347665

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.92  E-value=4.5e-23  Score=192.87  Aligned_cols=297  Identities=10%  Similarity=-0.003  Sum_probs=208.2

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeecccc---ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYE---SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH   93 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~   93 (537)
                      ++|++++.++.|.+||+.+++.+..++...   ....+  .+.|.       +..++++...++.|.+||+.+++.+..+
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~l~v~~~~~~~v~~~d~~~~~~~~~~   72 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVP--MVAPG-------GRIAYATVNKSESLVKIDLVTGETLGRI   72 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCE--EECTT-------SSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccce--EEcCC-------CCEEEEEeCCCCeEEEEECCCCCeEeeE
Confidence            578999999999999999999998887555   45666  66784       4456677777899999999999887766


Q ss_pred             CCCc------ceEEEEEeccccEEEEEe------------CCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942         94 GLSS------PLVRIVRSSVKRMYAVVT------------ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI  155 (537)
Q Consensus        94 ~~~~------~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  155 (537)
                      ....      .+..++|+|||++|+++.            .++.|.+||+.+           .+....+.. ...+.++
T Consensus        73 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-----------~~~~~~~~~-~~~~~~~  140 (337)
T 1pby_B           73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----------LSRRKAFEA-PRQITML  140 (337)
T ss_dssp             ECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----------TEEEEEEEC-CSSCCCE
T ss_pred             EcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-----------CcEEEEEeC-CCCccee
Confidence            5433      678899999999998886            568999999988           566666654 3457889


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER  233 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~  233 (537)
                      +|+ +++++++++  ++.    +                 .+||+       .+++..  +.     .+  . ....+  
T Consensus       141 ~~s-~dg~~l~~~--~~~----i-----------------~~~d~-------~~~~~~~~~~-----~~--~-~~~~~--  179 (337)
T 1pby_B          141 AWA-RDGSKLYGL--GRD----L-----------------HVMDP-------EAGTLVEDKP-----IQ--S-WEAET--  179 (337)
T ss_dssp             EEC-TTSSCEEEE--SSS----E-----------------EEEET-------TTTEEEEEEC-----ST--T-TTTTT--
T ss_pred             EEC-CCCCEEEEe--CCe----E-----------------EEEEC-------CCCcEeeeee-----cc--c-cCCCc--
Confidence            999 778877776  344    8                 88998       666554  32     22  1 11244  


Q ss_pred             cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                       .|+|++++++..+..+.....+|...........     ..                .....|.+||..+++.. .   
T Consensus       180 -~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----------------~~~~~v~~~d~~~~~~~-~---  233 (337)
T 1pby_B          180 -YAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD-----PT----------------AYRTGLLTMDLETGEMA-M---  233 (337)
T ss_dssp             -BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTS-----GG----------------GEEEEEEEEETTTCCEE-E---
T ss_pred             -eeCCCccEEeeeccCCCceeeeeecccccccccc-----cc----------------ccccceEEEeCCCCCce-E---
Confidence             7899998777655443322001211110000000     00                00126899999988653 1   


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  393 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  393 (537)
                      .....+...+.+++|+|++++++++  ++.|++||+. ..+.+..+....                              
T Consensus       234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~-~~~~~~~~~~~~------------------------------  280 (337)
T 1pby_B          234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE-KNASIKRVPLPH------------------------------  280 (337)
T ss_dssp             EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT-TTEEEEEEECSS------------------------------
T ss_pred             eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC-CCcCcceecCCC------------------------------
Confidence            1234556678899999999999988  6889999887 444443332110                              


Q ss_pred             CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942        394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                                          .+.+++|+|++++|++++.++.|.+||+.+++.+..+..+.
T Consensus       281 --------------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~  321 (337)
T 1pby_B          281 --------------------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG  321 (337)
T ss_dssp             --------------------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred             --------------------ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence                                56678999999999999999999999999999888887553

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=1.6e-22  Score=188.60  Aligned_cols=277  Identities=8%  Similarity=-0.015  Sum_probs=189.9

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccce-e
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKF-R  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~-~  142 (537)
                      ....+++.+.++.|.+||+.+++.+..+..+ ..+ .++|+|||++|++++. ++.|.+||..+           .+. .
T Consensus         9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-----------~~~~~   76 (331)
T 3u4y_A            9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-----------EPPKV   76 (331)
T ss_dssp             CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-----------SSCEE
T ss_pred             CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-----------CceeE
Confidence            5567888888999999999999887776654 455 9999999997777665 88999999998           455 6


Q ss_pred             EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc
Q psy10942        143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG  221 (537)
Q Consensus       143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~  221 (537)
                      ..+..+.....+++|+ ++++++++ +....+.+.|                 .+||.       .+++.. ..     .
T Consensus        77 ~~~~~~~~~~~~~~~s-~dg~~l~~-~~~~~~~~~i-----------------~v~d~-------~~~~~~~~~-----~  125 (331)
T 3u4y_A           77 VAIQEGQSSMADVDIT-PDDQFAVT-VTGLNHPFNM-----------------QSYSF-------LKNKFISTI-----P  125 (331)
T ss_dssp             EEEEECSSCCCCEEEC-TTSSEEEE-CCCSSSSCEE-----------------EEEET-------TTTEEEEEE-----E
T ss_pred             EecccCCCCccceEEC-CCCCEEEE-ecCCCCcccE-----------------EEEEC-------CCCCeEEEE-----E
Confidence            6666666655559999 77888774 3333111148                 99998       766655 22     2


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeec-cCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQ-SMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      +  .....++   +|+|+|++++++ ..++. +.  +|++....                                .+. 
T Consensus       126 ~--~~~~~~~---~~spdg~~l~~~~~~~~~~i~--~~~~~~~g--------------------------------~~~-  165 (331)
T 3u4y_A          126 I--PYDAVGI---AISPNGNGLILIDRSSANTVR--RFKIDADG--------------------------------VLF-  165 (331)
T ss_dssp             C--CTTEEEE---EECTTSSCEEEEEETTTTEEE--EEEECTTC--------------------------------CEE-
T ss_pred             C--CCCccce---EECCCCCEEEEEecCCCceEE--EEEECCCC--------------------------------cEe-
Confidence            2  3446889   999999866554 45577 88  88887521                                110 


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcee---eEEEEecCCCCEEEEEcCCC
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKL---LNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~---~~~~~~~~~~~~l~~~~~d~  375 (537)
                       +.. ..         ..........++|+|+|+++++++ .++.|.+||+. ..+.   +..+..              
T Consensus       166 -~~~-~~---------~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~-~~~~~~~~~~~~~--------------  219 (331)
T 3u4y_A          166 -DTG-QE---------FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ-NPENITLLNAVGT--------------  219 (331)
T ss_dssp             -EEE-EE---------EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS-STTSCEEEEEEEC--------------
T ss_pred             -ecC-Cc---------cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC-CCcccceeeeccC--------------
Confidence             100 00         001233468999999999665554 57889999987 3333   222221              


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCcee--eeEeec
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVC--LKSLEG  452 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~  452 (537)
                                        ..                  .+..++|+|||++++++. .++.|.+||+.+++.  +..+..
T Consensus       220 ------------------~~------------------~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~  263 (331)
T 3u4y_A          220 ------------------NN------------------LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH  263 (331)
T ss_dssp             ------------------SS------------------CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred             ------------------CC------------------CCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence                              10                  566789999999777665 467899999998876  444332


Q ss_pred             C----Ccc---eEEEEEecCCCEEEEEeC-CCcEEEEECCCCe
Q psy10942        453 H----DAS---VLRCHFINKGTQIVSTGA-DGLLKLWSIKTST  487 (537)
Q Consensus       453 ~----~~~---v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~  487 (537)
                      +    ...   ...++|+||+++|++++. ++.|.+||+....
T Consensus       264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          264 GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence            2    222   356899999998876655 5699999997654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.91  E-value=1.2e-23  Score=217.93  Aligned_cols=354  Identities=8%  Similarity=0.006  Sum_probs=212.2

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc----ccceeeeEeecCccccccCCcEEEEEeCcc----
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE----SLETCAVFHLSDETESKSGGKTFVLAGGEK----   76 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   76 (537)
                      +.+++|+  |||+++++ +.||.|++||+++++....+....    .+..+  .++|        +++++++++.+    
T Consensus        19 ~~~~~~s--pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~--~~Sp--------Dg~~l~~~~~~~~~~   85 (723)
T 1xfd_A           19 DPEAKWI--SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRY--EISP--------DREYALFSYNVEPIY   85 (723)
T ss_dssp             CCCCCBS--SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEE--EECT--------TSSEEEEEESCCCCS
T ss_pred             ccccEEc--CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceE--EECC--------CCCEEEEEecCccce
Confidence            5678899  89997776 789999999999998877666433    25555  6688        66777777553    


Q ss_pred             -----ceEEeeeccceeh--hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc
Q psy10942         77 -----SLLHYYETSAVKE--LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        77 -----~~i~~wd~~~~~~--~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                           +.|.+||+.+++.  +.....+ ..+..++|||||++||+++. +.|++||+.+           ++..+....+
T Consensus        86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-----------g~~~~~~~~~  153 (723)
T 1xfd_A           86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-----------KQAIRVVSTG  153 (723)
T ss_dssp             SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-----------SCCEEEECCC
T ss_pred             eecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-----------CceEEEecCC
Confidence                 7789999998876  2222222 24889999999999999887 7899999988           4444444433


Q ss_pred             hhhh------------------hhhhcccCCCccEEEeeeccccCCcccceeecc----------------cCCC-cchh
Q psy10942        149 SDEI------------------LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLG----------------ANRS-HNEW  193 (537)
Q Consensus       149 ~~~v------------------~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~----------------~~~~-~~~~  193 (537)
                      ...+                  .+++|+ ||++.|++++.+...   + ....+.                .... ....
T Consensus       154 ~~~~~~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  228 (723)
T 1xfd_A          154 KEGVIYNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSR---V-PIMELPTYTGSIYPTVKPYHYPKAGSENPSI  228 (723)
T ss_dssp             BTTTEEEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTT---S-CEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred             CCCceECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCc---c-ceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence            3322                  679999 788888887765320   1 000000                0000 0000


Q ss_pred             hHHHHHHHHHhhhccccccc--ccc-cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942        194 FDKTFERILEAKFKQSSSQQ--KHN-TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF  270 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~~~~~--l~~-~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~  270 (537)
                      -.++||+       .+++..  +.. .....+  ...+..+   +|+|||+++++....+.                   
T Consensus       229 ~l~~~d~-------~~~~~~~~l~~~~~~~~~--~~~~~~~---~~SpDg~~l~~~~~~~~-------------------  277 (723)
T 1xfd_A          229 SLHVIGL-------NGPTHDLEMMPPDDPRMR--EYYITMV---KWATSTKVAVTWLNRAQ-------------------  277 (723)
T ss_dssp             EEEEEES-------SSSCCCEECCCCCCGGGS--SEEEEEE---EESSSSEEEEEEEETTS-------------------
T ss_pred             EEEEEEC-------CCCceeEEeeCCccCCCc--cceeEEE---EEeCCCeEEEEEEcCCC-------------------
Confidence            0167777       655532  330 011134  5678888   99999987765432210                   


Q ss_pred             ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe----EEEEEcCCCCEEEEE--eCCC--
Q psy10942        271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI----NCVTVSPNDKLLASG--SLDK--  342 (537)
Q Consensus       271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~--~~d~--  342 (537)
                                            .+..|++||+.+++.....    ...+...+    ..++|+|||+.|+..  ..++  
T Consensus       278 ----------------------~~~~i~~~d~~~g~~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~  331 (723)
T 1xfd_A          278 ----------------------NVSILTLCDATTGVCTKKH----EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR  331 (723)
T ss_dssp             ----------------------CEEEEEEEETTTCCEEEEE----EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred             ----------------------CeEEEEEEeCCCCcceEEE----EeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence                                  0134566666655432111    01122222    367999999977753  4555  


Q ss_pred             ----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee-E
Q psy10942        343 ----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW-F  417 (537)
Q Consensus       343 ----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~-~  417 (537)
                          .|.+||+..+...                              .+...+.....                 .+. .
T Consensus       332 ~~~~~l~~~d~~~~~~~------------------------------~~~~~l~~~~~-----------------~~~~~  364 (723)
T 1xfd_A          332 GKFYHITVSSSQPNSSN------------------------------DNIQSITSGDW-----------------DVTKI  364 (723)
T ss_dssp             SCEEEEEEECSSCCSSS------------------------------CCCCBSCCSSS-----------------CEEEE
T ss_pred             cceeEEEEEeccCCCCc------------------------------cceeEeecCCe-----------------EEEee
Confidence                3444442111110                              00111111111                 223 3


Q ss_pred             EEEcCCCCEEEEEeCC---CcEEEEECCCc--eeeeEeec---CCcceEEEEEecCCCEEEEEeCC-C--cEEEEECCCC
Q psy10942        418 VNFSPLDRILISSSGD---ATIKLWCLTDY--VCLKSLEG---HDASVLRCHFINKGTQIVSTGAD-G--LLKLWSIKTS  486 (537)
Q Consensus       418 ~~~s~~~~~l~~~~~d---g~i~i~d~~~~--~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d-g--~v~vwd~~~~  486 (537)
                      ++|+|||+.|+..+.+   +.+++|++...  .....+..   |...+..++|+|||++|+..... +  ...+++..++
T Consensus       365 ~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~  444 (723)
T 1xfd_A          365 LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDK  444 (723)
T ss_dssp             EEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTC
T ss_pred             eEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCC
Confidence            6899999998876655   78999987642  23344443   56778999999999988876443 2  3455676666


Q ss_pred             eeEEEe
Q psy10942        487 TCVSTF  492 (537)
Q Consensus       487 ~~~~~~  492 (537)
                      +.+..+
T Consensus       445 ~~~~~~  450 (723)
T 1xfd_A          445 KKMFDL  450 (723)
T ss_dssp             CEEEEE
T ss_pred             CEEEEe
Confidence            655444

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=8e-23  Score=187.35  Aligned_cols=255  Identities=13%  Similarity=0.067  Sum_probs=183.3

Q ss_pred             EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942        114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW  193 (537)
Q Consensus       114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~  193 (537)
                      .+.|+.|++||+.+           .+.. .+..|...+.+++|+ |++++++++. ++.    |               
T Consensus        18 ~~~~~~i~~~d~~~-----------~~~~-~~~~~~~~v~~~~~s-pdg~~l~~~~-~~~----i---------------   64 (297)
T 2ojh_A           18 GSMRSSIEIFNIRT-----------RKMR-VVWQTPELFEAPNWS-PDGKYLLLNS-EGL----L---------------   64 (297)
T ss_dssp             CCCCEEEEEEETTT-----------TEEE-EEEEESSCCEEEEEC-TTSSEEEEEE-TTE----E---------------
T ss_pred             CCcceeEEEEeCCC-----------Ccee-eeccCCcceEeeEEC-CCCCEEEEEc-CCe----E---------------
Confidence            35689999999988           4443 566688889999999 7888887764 444    8               


Q ss_pred             hHHHHHHHHHhhhccc-cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC--CCcceeccccccCCCccccc
Q psy10942        194 FDKTFERILEAKFKQS-SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM--EPSTLEELEKRKTYHFPLFG  268 (537)
Q Consensus       194 ~~~~wd~~~~~~~~~~-~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~--d~~i~~~iw~~~~~~~~~~~  268 (537)
                        .+||+       .+ ++..  ..     ++. ...+.++   +|+|++++|++++.  ++...  +|.++        
T Consensus        65 --~~~d~-------~~~~~~~~~~~-----~~~-~~~~~~~---~~spdg~~l~~~~~~~~~~~~--l~~~~--------  116 (297)
T 2ojh_A           65 --YRLSL-------AGDPSPEKVDT-----GFA-TICNNDH---GISPDGALYAISDKVEFGKSA--IYLLP--------  116 (297)
T ss_dssp             --EEEES-------SSCCSCEECCC-----TTC-CCBCSCC---EECTTSSEEEEEECTTTSSCE--EEEEE--------
T ss_pred             --EEEeC-------CCCCCceEecc-----ccc-cccccce---EECCCCCEEEEEEeCCCCcce--EEEEE--------
Confidence              99998       76 5554  33     330 3678889   99999999998873  34455  54443        


Q ss_pred             ccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE-EEeCCCcEEEE
Q psy10942        269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA-SGSLDKTVKVW  347 (537)
Q Consensus       269 ~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~  347 (537)
                                                       ..++..      ..+.. ...+..++|+|+++.|+ ++..++.+++|
T Consensus       117 ---------------------------------~~~~~~------~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~  156 (297)
T 2ojh_A          117 ---------------------------------STGGTP------RLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIY  156 (297)
T ss_dssp             ---------------------------------TTCCCC------EECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             ---------------------------------CCCCce------EEeec-CCCccceEECCCCCEEEEEECCCCceEEE
Confidence                                             222221      11111 22478899999999887 67788888888


Q ss_pred             EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942        348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL  427 (537)
Q Consensus       348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  427 (537)
                      ++.........+.                                .+..                 .+.+++|+|++++|
T Consensus       157 ~~~~~~~~~~~~~--------------------------------~~~~-----------------~~~~~~~s~dg~~l  187 (297)
T 2ojh_A          157 SMDIDSGVETRLT--------------------------------HGEG-----------------RNDGPDYSPDGRWI  187 (297)
T ss_dssp             EEETTTCCEEECC--------------------------------CSSS-----------------CEEEEEECTTSSEE
T ss_pred             EEECCCCcceEcc--------------------------------cCCC-----------------ccccceECCCCCEE
Confidence            8752222111111                                1111                 67788999999988


Q ss_pred             EEEe-CCCcEEEEECC-CceeeeEeecCCcceEEEEEecCCCEEEEEeCC-----------CcEEEEECCCCeeE--EEe
Q psy10942        428 ISSS-GDATIKLWCLT-DYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-----------GLLKLWSIKTSTCV--STF  492 (537)
Q Consensus       428 ~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----------g~v~vwd~~~~~~~--~~~  492 (537)
                      +.++ .++.+++|++. .+..+..+..|...+..++|+|++++|++++.+           +.|++||+.+++..  ..+
T Consensus       188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~  267 (297)
T 2ojh_A          188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL  267 (297)
T ss_dssp             EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred             EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence            8766 58899999886 456667777788889999999999999988776           56999999888654  344


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                      .+|...+           ..+   +|+|++++|++++.|.
T Consensus       268 ~~~~~~~-----------~~~---~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          268 FGGQGTM-----------NSP---NWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EESTTTS-----------CSC---CBCTTSSEEEEEEECC
T ss_pred             CCCCccc-----------ccc---eECCCCCEEEEEEecc
Confidence            4777778           888   9999999999887654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=1.7e-22  Score=189.42  Aligned_cols=313  Identities=11%  Similarity=0.063  Sum_probs=195.4

Q ss_pred             CcEEEEEeCccceEEeeecc-ce--ehhhhcCCCcceEEEEEeccccEEEEEeCC-ceEEEEecccccCcccccccccce
Q psy10942         66 GKTFVLAGGEKSLLHYYETS-AV--KELYQHGLSSPLVRIVRSSVKRMYAVVTAD-HNISLYRLNSETGLEERPNKILKF  141 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~-~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~  141 (537)
                      +..++++.+.++.|++||+. ++  +.+..+.....+..++|+|+|++|++++.+ +.|.+|+++....       ....
T Consensus         4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-------~~~~   76 (343)
T 1ri6_A            4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-------ALTF   76 (343)
T ss_dssp             EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-------CEEE
T ss_pred             eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-------ceee
Confidence            33445555789999999995 33  445555566789999999999999988886 8999999982100       0233


Q ss_pred             eEEeecchhhhhhhhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccc
Q psy10942        142 RKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERL  220 (537)
Q Consensus       142 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~  220 (537)
                      +..+..+. .+..++|+ ++++.++++.. ++.    |                 .+||+       ..+......... 
T Consensus        77 ~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~----i-----------------~~~d~-------~~~~~~~~~~~~-  125 (343)
T 1ri6_A           77 AAESALPG-SLTHISTD-HQGQFVFVGSYNAGN----V-----------------SVTRL-------EDGLPVGVVDVV-  125 (343)
T ss_dssp             EEEEECSS-CCSEEEEC-TTSSEEEEEETTTTE----E-----------------EEEEE-------ETTEEEEEEEEE-
T ss_pred             ccccccCC-CCcEEEEc-CCCCEEEEEecCCCe----E-----------------EEEEC-------CCCccccccccc-
Confidence            44555444 68899999 67777766543 333    8                 88887       422211000000 


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      ..  ...+.++   +|+|+++++++++ .++.+.  +|++....                                .+..
T Consensus       126 ~~--~~~~~~~---~~s~dg~~l~~~~~~~~~v~--~~d~~~~~--------------------------------~~~~  166 (343)
T 1ri6_A          126 EG--LDGCHSA---NISPDNRTLWVPALKQDRIC--LFTVSDDG--------------------------------HLVA  166 (343)
T ss_dssp             CC--CTTBCCC---EECTTSSEEEEEEGGGTEEE--EEEECTTS--------------------------------CEEE
T ss_pred             cC--CCCceEE---EECCCCCEEEEecCCCCEEE--EEEecCCC--------------------------------ceee
Confidence            22  3457788   8999998777665 677777  77776411                                0100


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccC-Ccee--eEEEEecCCCCEEEEEcCCC
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTG-GLKL--LNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~-~~~~--~~~~~~~~~~~~l~~~~~d~  375 (537)
                      ...          ..........+.+++|+|+++++++++ .++.|.+|++.. ..+.  ...+...+.           
T Consensus       167 ~~~----------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~-----------  225 (343)
T 1ri6_A          167 QDP----------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE-----------  225 (343)
T ss_dssp             EEE----------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT-----------
T ss_pred             ecc----------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc-----------
Confidence            000          000011224577899999999776655 789999999962 1111  111110000           


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECC----CceeeeEe
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLT----DYVCLKSL  450 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~----~~~~~~~~  450 (537)
                                       .+..               ...+..++|+|++++|+++. .++.|.+||+.    +.+.+..+
T Consensus       226 -----------------~~~~---------------~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~  273 (343)
T 1ri6_A          226 -----------------NFSD---------------TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ  273 (343)
T ss_dssp             -----------------TCCS---------------CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred             -----------------cccc---------------cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence                             0000               00566799999998887554 78999999998    34555566


Q ss_pred             ecCCcceEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCee--EEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942        451 EGHDASVLRCHFINKGTQIVSTG-ADGLLKLW--SIKTSTC--VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       451 ~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vw--d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      ..+.. +..++|+|++++|++++ .++.|.+|  |..+++.  +..+.... ..           .++   +|.|+.+.
T Consensus       274 ~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~-~p-----------~~i---~~~~~~~~  336 (343)
T 1ri6_A          274 PTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQ-GP-----------MWV---VVNAHEGG  336 (343)
T ss_dssp             ECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSS-SC-----------CEE---EEEEEC--
T ss_pred             cCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCC-CC-----------eeE---EEEcccCC
Confidence            65544 88999999999988887 57999999  5456643  33333322 22           566   88876553

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=5.2e-23  Score=188.59  Aligned_cols=258  Identities=12%  Similarity=0.063  Sum_probs=181.5

Q ss_pred             eCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc-ccCcccccccccceeEEeecc-hh
Q psy10942         73 GGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS-ETGLEERPNKILKFRKQFVGF-SD  150 (537)
Q Consensus        73 ~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~-~~  150 (537)
                      .+.++.|++||+.+++......+.+.|.+++|+|||++|++++ ++.|++||+.+ +           +......++ ..
T Consensus        18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~-----------~~~~~~~~~~~~   85 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP-----------SPEKVDTGFATI   85 (297)
T ss_dssp             CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC-----------SCEECCCTTCCC
T ss_pred             CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC-----------CceEeccccccc
Confidence            4678999999999988776666667999999999999999976 68999999987 4           223334444 35


Q ss_pred             hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEE
Q psy10942        151 EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVT  229 (537)
Q Consensus       151 ~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~  229 (537)
                      .+.+++|+ ++++.++++....+  +..                 .+|.+..     .+.... +.     .+   ..+.
T Consensus        86 ~~~~~~~s-pdg~~l~~~~~~~~--~~~-----------------~l~~~~~-----~~~~~~~~~-----~~---~~~~  132 (297)
T 2ojh_A           86 CNNDHGIS-PDGALYAISDKVEF--GKS-----------------AIYLLPS-----TGGTPRLMT-----KN---LPSY  132 (297)
T ss_dssp             BCSCCEEC-TTSSEEEEEECTTT--SSC-----------------EEEEEET-----TCCCCEECC-----SS---SSEE
T ss_pred             cccceEEC-CCCCEEEEEEeCCC--Ccc-----------------eEEEEEC-----CCCceEEee-----cC---CCcc
Confidence            68999999 78888887774432  224                 4444300     333333 33     33   3488


Q ss_pred             EEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942        230 LLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL  308 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~  308 (537)
                      .+   +|+|++++|+ ++..++.+.  +|+++..                                         ++.  
T Consensus       133 ~~---~~spdg~~l~~~~~~~~~~~--l~~~~~~-----------------------------------------~~~--  164 (297)
T 2ojh_A          133 WH---GWSPDGKSFTYCGIRDQVFD--IYSMDID-----------------------------------------SGV--  164 (297)
T ss_dssp             EE---EECTTSSEEEEEEEETTEEE--EEEEETT-----------------------------------------TCC--
T ss_pred             ce---EECCCCCEEEEEECCCCceE--EEEEECC-----------------------------------------CCc--
Confidence            88   9999998877 566667777  6665431                                         111  


Q ss_pred             eeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942        309 LNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                          ...+..+...+.+++|+|+++.|++++ .++.+++|++.........+.                           
T Consensus       165 ----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------  213 (297)
T 2ojh_A          165 ----ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT---------------------------  213 (297)
T ss_dssp             ----EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---------------------------
T ss_pred             ----ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---------------------------
Confidence                111234566789999999999888766 488888888762222222221                           


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----------CcEEEEECCCcee--eeEeecCC
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----------ATIKLWCLTDYVC--LKSLEGHD  454 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~i~d~~~~~~--~~~~~~~~  454 (537)
                           .+..                 .+..++|+|++++|++++.+           +.|.+||+.+++.  +..+.+|.
T Consensus       214 -----~~~~-----------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~  271 (297)
T 2ojh_A          214 -----DSAY-----------------GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ  271 (297)
T ss_dssp             -----CCSE-----------------EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred             -----cCCc-----------------ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence                 1111                 67778999999999888765           5699999988755  44455788


Q ss_pred             cceEEEEEecCCCEEEEEeCCC
Q psy10942        455 ASVLRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       455 ~~v~~~~~s~~~~~l~s~~~dg  476 (537)
                      ..+..++|+|++++|++++.+.
T Consensus       272 ~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          272 GTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTSCSCCBCTTSSEEEEEEECC
T ss_pred             cccccceECCCCCEEEEEEecc
Confidence            8999999999999999887653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=4e-22  Score=186.44  Aligned_cols=301  Identities=10%  Similarity=0.037  Sum_probs=200.9

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCc---ceEEEEEeccccEEEE-EeCCceEEEEecccccCcccccccccceeE
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSS---PLVRIVRSSVKRMYAV-VTADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      .++++++.++.|.+||+.+++.+..+....   .+..++|+|+|+++++ +..++.|.+||+.+           ++.+.
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-----------~~~~~   70 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-----------GETLG   70 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-----------CCEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-----------CCeEe
Confidence            478888889999999999999888777655   6899999999987654 45578999999988           55555


Q ss_pred             Eeec-c----hhhhhhhhcccCCCccEEEeeecc------c--cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc
Q psy10942        144 QFVG-F----SDEILDIALLGEEDSHIVVASNEY------L--NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS  210 (537)
Q Consensus       144 ~~~~-~----~~~v~~~~~~~~~~~~l~~~~~~~------~--~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~  210 (537)
                      .+.. +    ...+..++|+ ++++.++++....      .  ..+.|                 .+||.       .++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~i-----------------~v~d~-------~~~  125 (337)
T 1pby_B           71 RIDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRV-----------------ALYDA-------ETL  125 (337)
T ss_dssp             EEECCBTTEEEECTTCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEE-----------------EEEET-------TTT
T ss_pred             eEEcCCcccccccccceEEC-CCCCEEEEEecccccccccccccCceE-----------------EEEEC-------CCC
Confidence            5543 1    2357899999 7777777765210      0  01337                 88888       666


Q ss_pred             ccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEE
Q psy10942        211 SQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLA  289 (537)
Q Consensus       211 ~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~  289 (537)
                      +.. ..     ..  ...+.++   +|+|++++++++  ++.+.  +|++..+.                          
T Consensus       126 ~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~--~~~i~--~~d~~~~~--------------------------  165 (337)
T 1pby_B          126 SRRKAF-----EA--PRQITML---AWARDGSKLYGL--GRDLH--VMDPEAGT--------------------------  165 (337)
T ss_dssp             EEEEEE-----EC--CSSCCCE---EECTTSSCEEEE--SSSEE--EEETTTTE--------------------------
T ss_pred             cEEEEE-----eC--CCCccee---EECCCCCEEEEe--CCeEE--EEECCCCc--------------------------
Confidence            554 21     22  3456778   899999888777  46777  77776521                          


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEE--EEEccCCceeeEEEEecCCCCE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK--VWSTTGGLKLLNVLRGHKKGTQ  367 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~--i~d~~~~~~~~~~~~~~~~~~~  367 (537)
                            .+..+...              .+..+   +.|+|+++.++..+.++...  +|....          ...+..
T Consensus       166 ------~~~~~~~~--------------~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~----------~~~~~~  212 (337)
T 1pby_B          166 ------LVEDKPIQ--------------SWEAE---TYAQPDVLAVWNQHESSGVMATPFYTAR----------KDIDPA  212 (337)
T ss_dssp             ------EEEEECST--------------TTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEB----------TTSCTT
T ss_pred             ------Eeeeeecc--------------ccCCC---ceeCCCccEEeeeccCCCceeeeeeccc----------cccccc
Confidence                  00111110              00111   25788888776655444332  221110          000000


Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL  447 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~  447 (537)
                      .. ......|.+||+.+++.. .+..          .+..     ..+..++|+|++++++++  ++.|.+||+.+++.+
T Consensus       213 ~~-~~~~~~v~~~d~~~~~~~-~~~~----------~~~~-----~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~  273 (337)
T 1pby_B          213 DP-TAYRTGLLTMDLETGEMA-MREV----------RIMD-----VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI  273 (337)
T ss_dssp             SG-GGEEEEEEEEETTTCCEE-EEEE----------EECS-----SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred             cc-cccccceEEEeCCCCCce-Eeec----------CCCC-----CceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence            00 001125788888877654 2111          0100     156779999999999988  689999999999888


Q ss_pred             eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc
Q psy10942        448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL  497 (537)
Q Consensus       448 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~  497 (537)
                      ..+..+ ..+.+++|+|++++|++++.++.|++||+.+++.+..+..+..
T Consensus       274 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          274 KRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             EEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             ceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence            887743 4678999999999999999999999999999999988876543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.89  E-value=4.6e-21  Score=180.50  Aligned_cols=274  Identities=10%  Similarity=-0.003  Sum_probs=192.8

Q ss_pred             cceEEEEEeccccEEEEEeC-------CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         97 SPLVRIVRSSVKRMYAVVTA-------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ..+..++|+|++++|++++.       ++.|.+||..+           ++....+... ..+..++|+ ++++.++++.
T Consensus        41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~-----------~~~~~~~~~~-~~~~~~~~s-~dg~~l~v~~  107 (353)
T 3vgz_A           41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT-----------LEVTQAIHND-LKPFGATIN-NTTQTLWFGN  107 (353)
T ss_dssp             SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT-----------CCEEEEEEES-SCCCSEEEE-TTTTEEEEEE
T ss_pred             cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC-----------CeEEEEEecC-CCcceEEEC-CCCCEEEEEe
Confidence            56889999999999888773       57899999998           6666666643 347889999 6777665544


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCC-------cCeEEEEeccCcccCC
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDE-------LKTVTLLERGKTVKEE  240 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~-------~~~v~~~~~~~~s~~~  240 (537)
                      .. +  +.|                 .+||.       .+++..  +.     .+..       ...+.++   +|+|++
T Consensus       108 ~~-~--~~v-----------------~~~d~-------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~s~dg  152 (353)
T 3vgz_A          108 TV-N--SAV-----------------TAIDA-------KTGEVKGRLV-----LDDRKRTEEVRPLQPREL---VADDAT  152 (353)
T ss_dssp             TT-T--TEE-----------------EEEET-------TTCCEEEEEE-----SCCCCCCSSCCCCEEEEE---EEETTT
T ss_pred             cC-C--CEE-----------------EEEeC-------CCCeeEEEEe-----cCCCccccccCCCCCceE---EECCCC
Confidence            32 1  338                 88888       666654  33     2200       1126778   888988


Q ss_pred             Ceeeecc--CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        241 DLFPRQS--MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       241 ~~l~~~~--~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++++++.  .++.+                                             .+||..+++....     +..
T Consensus       153 ~~l~~~~~~~~~~i---------------------------------------------~~~d~~~~~~~~~-----~~~  182 (353)
T 3vgz_A          153 NTVYISGIGKESVI---------------------------------------------WVVDGGNIKLKTA-----IQN  182 (353)
T ss_dssp             TEEEEEEESSSCEE---------------------------------------------EEEETTTTEEEEE-----ECC
T ss_pred             CEEEEEecCCCceE---------------------------------------------EEEcCCCCceEEE-----ecC
Confidence            8766544  23444                                             4444444433211     122


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      +...+.+++|+|+++++++++.++.|.+||+. ..+....+.....                            .+..  
T Consensus       183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~----------------------------~~~~--  231 (353)
T 3vgz_A          183 TGKMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLLDD----------------------------GKEH--  231 (353)
T ss_dssp             CCTTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECCCS----------------------------SSCC--
T ss_pred             CCCccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcCCC----------------------------CCCc--
Confidence            33346788999999999999999999999988 5555544433111                            0110  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCC
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADG  476 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg  476 (537)
                                     .+..++|+|+++++++++. ++.|.+||..+++.+..+....  ...++|+|+++++++++ .++
T Consensus       232 ---------------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~  294 (353)
T 3vgz_A          232 ---------------FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAG  294 (353)
T ss_dssp             ---------------CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTT
T ss_pred             ---------------ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCC
Confidence                           5677899999997777665 4899999999999888887543  26799999999766655 689


Q ss_pred             cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        477 LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       477 ~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                      .|.+||..+++.+..+..+. .+           ..+   +|+|||++|+++..+
T Consensus       295 ~v~~~d~~~~~~~~~~~~~~-~~-----------~~~---~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          295 KVSVIDAKSYKVVKTFDTPT-HP-----------NSL---ALSADGKTLYVSVKQ  334 (353)
T ss_dssp             EEEEEETTTTEEEEEEECCS-EE-----------EEE---EECTTSCEEEEEEEC
T ss_pred             eEEEEECCCCeEEEEEecCC-CC-----------CeE---EEcCCCCEEEEEEcc
Confidence            99999999999888876544 45           778   999999988777655

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=3.5e-21  Score=180.52  Aligned_cols=309  Identities=10%  Similarity=0.044  Sum_probs=193.0

Q ss_pred             ceEEEecCcceEEEEEcC-cc--ceeeeeccccccceeeeEeecCccccccCCcEEEEEeCcc-ceEEeeecc--cee--
Q psy10942         17 EFSVHCGRDKVLFTWDLS-SR--KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK-SLLHYYETS--AVK--   88 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~wd~~--~~~--   88 (537)
                      ..+++++.++.|++||+. ++  +.+..++....+..+  .+.|        +++++++++.+ +.|.+|++.  +++  
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~sp--------dg~~l~~~~~~~~~v~~~~~~~~~~~~~   75 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPM--VVSP--------DKRYLYVGVRPEFRVLAYRIAPDDGALT   75 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCE--EECT--------TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceE--EECC--------CCCEEEEeecCCCeEEEEEecCCCCcee
Confidence            344555889999999995 34  344455566666666  5688        55666666555 899999997  444  


Q ss_pred             hhhhcCCCcceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         89 ELYQHGLSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        89 ~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      .+..+..++.+..++|+|+|++|++++. ++.|.+||+..+.        ..+....+..+. .+.+++|+ ++++.+++
T Consensus        76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~-~~~~~~~s-~dg~~l~~  145 (343)
T 1ri6_A           76 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL--------PVGVVDVVEGLD-GCHSANIS-PDNRTLWV  145 (343)
T ss_dssp             EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE--------EEEEEEEECCCT-TBCCCEEC-TTSSEEEE
T ss_pred             eccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc--------cccccccccCCC-CceEEEEC-CCCCEEEE
Confidence            3445555568999999999998877765 7889999994210        034555555444 48899999 67777766


Q ss_pred             ee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-ccccccc--cccccCCCcCeEEEEeccCcccCCCee
Q psy10942        168 AS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQKHN--TERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       168 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~l~~--~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      +. .++.    |                 .+||+       .+ ++.....  ......  ...+..+   +|+|+++++
T Consensus       146 ~~~~~~~----v-----------------~~~d~-------~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~pdg~~l  192 (343)
T 1ri6_A          146 PALKQDR----I-----------------CLFTV-------SDDGHLVAQDPAEVTTVE--GAGPRHM---VFHPNEQYA  192 (343)
T ss_dssp             EEGGGTE----E-----------------EEEEE-------CTTSCEEEEEEEEEECST--TCCEEEE---EECTTSSEE
T ss_pred             ecCCCCE----E-----------------EEEEe-------cCCCceeeecccccccCC--CCCcceE---EECCCCCEE
Confidence            65 4444    8                 88988       54 3322100  000112  3467888   999999976


Q ss_pred             ee-ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE-CCCCceeeeeecccccccCC
Q psy10942        244 PR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS-TTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       244 ~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~-~~~~~~~~~~~~~~~~~~~~  321 (537)
                      +. +..++.+.  +|++.........                            +.... +...           .....
T Consensus       193 ~~~~~~~~~i~--~~~~~~~~g~~~~----------------------------~~~~~~~~~~-----------~~~~~  231 (343)
T 1ri6_A          193 YCVNELNSSVD--VWELKDPHGNIEC----------------------------VQTLDMMPEN-----------FSDTR  231 (343)
T ss_dssp             EEEETTTTEEE--EEESSCTTSCCEE----------------------------EEEEECSCTT-----------CCSCC
T ss_pred             EEEeCCCCEEE--EEEecCCCCcEEE----------------------------EeeccccCcc-----------ccccC
Confidence            54 44778888  8888642111000                            00001 0000           01134


Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942        322 DINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT  400 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~  400 (537)
                      .+..++|+|++++|+++. .++.|.+||+.........+.                             .+..+.     
T Consensus       232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~-----------------------------~~~~~~-----  277 (343)
T 1ri6_A          232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG-----------------------------FQPTET-----  277 (343)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE-----------------------------EEECSS-----
T ss_pred             CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee-----------------------------eecCCC-----
Confidence            577899999999887554 789999999872111111110                             000000     


Q ss_pred             EEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEEC--CCce--eeeEeecCCcceEEEEEecCCC
Q psy10942        401 LAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCL--TDYV--CLKSLEGHDASVLRCHFINKGT  467 (537)
Q Consensus       401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~~--~~~~~~~~~~~v~~~~~s~~~~  467 (537)
                                   .+..++|+|++++|++++ .++.|.+|++  .+++  .+..+... ....+++|.|+.+
T Consensus       278 -------------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~  335 (343)
T 1ri6_A          278 -------------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG  335 (343)
T ss_dssp             -------------SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred             -------------ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence                         456688999999888887 5799999954  4553  34444432 4467788887543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.89  E-value=4.4e-21  Score=178.89  Aligned_cols=276  Identities=12%  Similarity=0.060  Sum_probs=181.3

Q ss_pred             EEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee-ccccCCccc
Q psy10942        102 IVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGGDLS  179 (537)
Q Consensus       102 ~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~~i~  179 (537)
                      ..|.+++++ +++.+.++.|.+||..+           ++....+..+...+ .++|+ +++++++++.. +..    | 
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~-~~~~s-~dg~~l~~~~~~~~~----i-   64 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDT-----------LEILNQITLGYDFV-DTAIT-SDCSNVVVTSDFCQT----L-   64 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTT-----------CCEEEEEECCCCEE-EEEEC-SSSCEEEEEESTTCE----E-
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcc-----------cceeeeEEccCCcc-eEEEc-CCCCEEEEEeCCCCe----E-
Confidence            346666555 66777889999999998           66666766665556 99999 67776666554 334    8 


Q ss_pred             ceeecccCCCcchhhHHHHHHHHHhhhcccccc-c--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC---cce
Q psy10942        180 GLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP---STL  253 (537)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~---~i~  253 (537)
                                      .+||.       .+++. .  +.     .+  ..+..++   +|+|+|++++++..++   .+.
T Consensus        65 ----------------~~~d~-------~~~~~~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~~~~~~~~~i~  111 (331)
T 3u4y_A           65 ----------------VQIET-------QLEPPKVVAIQ-----EG--QSSMADV---DITPDDQFAVTVTGLNHPFNMQ  111 (331)
T ss_dssp             ----------------EEEEC-------SSSSCEEEEEE-----EC--SSCCCCE---EECTTSSEEEECCCSSSSCEEE
T ss_pred             ----------------EEEEC-------CCCceeEEecc-----cC--CCCccce---EECCCCCEEEEecCCCCcccEE
Confidence                            88888       76665 3  44     45  5555558   8999999888544432   455


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        +|++..                                           ++....     +. +.....+++|+|+|+
T Consensus       112 --v~d~~~-------------------------------------------~~~~~~-----~~-~~~~~~~~~~spdg~  140 (331)
T 3u4y_A          112 --SYSFLK-------------------------------------------NKFIST-----IP-IPYDAVGIAISPNGN  140 (331)
T ss_dssp             --EEETTT-------------------------------------------TEEEEE-----EE-CCTTEEEEEECTTSS
T ss_pred             --EEECCC-------------------------------------------CCeEEE-----EE-CCCCccceEECCCCC
Confidence              555543                                           332111     11 123458999999998


Q ss_pred             EEEEE-eCCCc-EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        334 LLASG-SLDKT-VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       334 ~l~~~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                      +++++ ..++. +.+|++...+..... ..                           ..+....                
T Consensus       141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~-~~---------------------------~~~~~~~----------------  176 (331)
T 3u4y_A          141 GLILIDRSSANTVRRFKIDADGVLFDT-GQ---------------------------EFISGGT----------------  176 (331)
T ss_dssp             CEEEEEETTTTEEEEEEECTTCCEEEE-EE---------------------------EEECSSS----------------
T ss_pred             EEEEEecCCCceEEEEEECCCCcEeec-CC---------------------------ccccCCC----------------
Confidence            65554 55588 999998833221111 00                           0000000                


Q ss_pred             EeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCcee---eeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10942        412 TGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVC---LKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTS  486 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~  486 (537)
                        ....++|+|+|+++++++ .++.|.+||+.+++.   +..+..+ ..+..++|+|+|++|++++ .++.|.+||+.++
T Consensus       177 --~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~  253 (331)
T 3u4y_A          177 --RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG  253 (331)
T ss_dssp             --SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred             --CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence              567789999999665554 688999999998887   7777744 6678999999999877665 4788999999998


Q ss_pred             ee--EEEecCC----ccceeccCCCCCCccccccceeeecCCCEEEEEeC-CCCEEeC
Q psy10942        487 TC--VSTFDKH----ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       487 ~~--~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~vW  537 (537)
                      +.  +..+..+    ....        .....+   +|+|||++|++++. ++.|.+|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~spdg~~l~v~~~~~~~v~v~  300 (331)
T 3u4y_A          254 TLSFVKSFGHGLLIDPRPL--------FGANQM---ALNKTETKLFISANISRELKVF  300 (331)
T ss_dssp             EEEEEEEEECCCCCCCGGG--------TTCCCE---EECTTSSEEEEEETTTTEEEEE
T ss_pred             ceeeecccccccccCCCCc--------ccccce---EECCCCCEEEEecCCCCcEEEE
Confidence            87  4443322    2222        000235   99999999876655 5688887

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.88  E-value=7e-22  Score=204.41  Aligned_cols=354  Identities=11%  Similarity=0.042  Sum_probs=207.5

Q ss_pred             eeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccc----cceeeeEeecCccccccCCcEEEEEeCc-------
Q psy10942          7 CFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYES----LETCAVFHLSDETESKSGGKTFVLAGGE-------   75 (537)
Q Consensus         7 ~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   75 (537)
                      .+.|+  +|+++++++ .|+.|++||+++++....+.....    +..+  .++|        ++++|+.++.       
T Consensus        20 ~~~~s--~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~Sp--------Dg~~la~~~~~~~~~~~   86 (719)
T 1z68_A           20 FPNWI--SGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNY--GLSP--------DRQFVYLESDYSKLWRY   86 (719)
T ss_dssp             CCEES--SSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEE--EECT--------TSSEEEEEEEEEECSSS
T ss_pred             ccEEC--CCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeE--EECC--------CCCeEEEEecCceeEEe
Confidence            56788  888766655 589999999999998776653322    5555  6688        6677777765       


Q ss_pred             --cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhh-
Q psy10942         76 --KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI-  152 (537)
Q Consensus        76 --~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-  152 (537)
                        ++.|++||+.+++.+......+.+..++|||||++||++. ++.|++||+.+++.......  +.....+.++...| 
T Consensus        87 s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~  163 (719)
T 1z68_A           87 SYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN--GRENKIFNGIPDWVY  163 (719)
T ss_dssp             CEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC--CBTTTEEESSCCHHH
T ss_pred             ecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC--CCcCCeEccccccee
Confidence              6899999999988743223336789999999999999986 68999999987421100000  00000122333333 


Q ss_pred             --------hhhhcccCCCccEEEeeeccccCCcccceeec-------------------ccCCCcchhhHHHHHHHHHhh
Q psy10942        153 --------LDIALLGEEDSHIVVASNEYLNGGDLSGLVKL-------------------GANRSHNEWFDKTFERILEAK  205 (537)
Q Consensus       153 --------~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~-------------------~~~~~~~~~~~~~wd~~~~~~  205 (537)
                              .+++|+ ||++.|++++.+...   + ..+.+                   +..... .. .++||+     
T Consensus       164 ~ee~~~~~~~~~wS-PDG~~la~~~~d~~~---~-~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~-~~-l~~~d~-----  231 (719)
T 1z68_A          164 EEEMLATKYALWWS-PNGKFLAYAEFNDTD---I-PVIAYSYYGDEQYPRTINIPYPKAGAKNPV-VR-IFIIDT-----  231 (719)
T ss_dssp             HHHTTCSSCCEEEC-TTSSEEEEEEEECTT---S-CEEEEEECCSSSSCEEEEEECCBTTSCCCE-EE-EEEEES-----
T ss_pred             eeecccCcccEEEC-CCCCEEEEEEECCCC---C-ceEEeeccCCCCCccceeecCCCCCCCCCe-eE-EEEEEC-----
Confidence                    489999 888999887765320   1 00000                   000000 00 057777     


Q ss_pred             hcccccc----ccc-ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        206 FKQSSSQ----QKH-NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       206 ~~~~~~~----~l~-~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                        .+++.    .+. ...+.+|  ...+..+   +|+||++++++....+.-                            
T Consensus       232 --~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~SpD~~~~~~~~~~~~~----------------------------  276 (719)
T 1z68_A          232 --TYPAYVGPQEVPVPAMIASS--DYYFSWL---TWVTDERVCLQWLKRVQN----------------------------  276 (719)
T ss_dssp             --SCHHHHCCEECCCCHHHHTS--CEEEEEE---EESSSSEEEEEEEESSTT----------------------------
T ss_pred             --CCCCccceeEccCCccCCCC--cceEEEe---EEeCCCeEEEEEeccccC----------------------------
Confidence              55443    111 0112268  8889999   999998766653221110                            


Q ss_pred             eCCcceEEEEEeCCCeEEEEE----CCCCceeeeeecccc----cccCCCeE-----EEEEcCCCCEEEE--EeCCCc--
Q psy10942        281 TGGTVELLASGSLDKTVKVWS----TTGGLKLLNVLRGHK----KGHEKDIN-----CVTVSPNDKLLAS--GSLDKT--  343 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~----~~~~~~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~~--~~~d~~--  343 (537)
                                   ...|.+||    ..+++.     ....    ..|...+.     .+.|+|||+.++.  ...+|.  
T Consensus       277 -------------~~~l~~~d~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~  338 (719)
T 1z68_A          277 -------------VSVLSICDFREDWQTWDC-----PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKH  338 (719)
T ss_dssp             -------------EEEEEEEEECSSSSSEEC-----CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEE
T ss_pred             -------------eEEEEEEcccCCCCCCce-----EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceE
Confidence                         01344555    443332     1112    24455555     7889999996554  444553  


Q ss_pred             EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942        344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL  423 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~  423 (537)
                      |.+||+.                                 +++ ...+..+..                 .+..+.++ +
T Consensus       339 l~~~~~~---------------------------------~~~-~~~lt~~~~-----------------~v~~~~~~-d  366 (719)
T 1z68_A          339 IHYIKDT---------------------------------VEN-AIQITSGKW-----------------EAINIFRV-T  366 (719)
T ss_dssp             EEEESSC---------------------------------STT-CEECSCSSS-----------------CEEEEEEE-C
T ss_pred             EEEEECC---------------------------------CCc-eEecccCce-----------------EEEEEEEE-e
Confidence            3333433                                 222 111111111                 34444555 6


Q ss_pred             CCEEEEEeCC-----CcEEEEECCC--ce-eeeEee----cCCcceEEEEEecCCCEEEEE-eCC--CcEEEEECCCCee
Q psy10942        424 DRILISSSGD-----ATIKLWCLTD--YV-CLKSLE----GHDASVLRCHFINKGTQIVST-GAD--GLLKLWSIKTSTC  488 (537)
Q Consensus       424 ~~~l~~~~~d-----g~i~i~d~~~--~~-~~~~~~----~~~~~v~~~~~s~~~~~l~s~-~~d--g~v~vwd~~~~~~  488 (537)
                      ++.|+..+.+     +..++|.+..  +. ....+.    +|...+..+.|+|++++++.. +.+  ..+.+||+.+++.
T Consensus       367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~  446 (719)
T 1z68_A          367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE  446 (719)
T ss_dssp             SSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred             CCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence            6666666554     7788887653  32 122332    256678899999999877754 333  4688999988886


Q ss_pred             EEEec
Q psy10942        489 VSTFD  493 (537)
Q Consensus       489 ~~~~~  493 (537)
                      +..+.
T Consensus       447 ~~~~~  451 (719)
T 1z68_A          447 IKILE  451 (719)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            66554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.87  E-value=1.3e-20  Score=177.34  Aligned_cols=281  Identities=6%  Similarity=-0.026  Sum_probs=195.5

Q ss_pred             eeeeccccccceeeeEeecCccccccCCcEEEEEeC-c------cceEEeeeccceehhhhcCCCcceEEEEEeccccEE
Q psy10942         39 LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG-E------KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMY  111 (537)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l  111 (537)
                      +...+.......+  .+.|        +++++++++ .      ++.|.+||..+++.+..+.....+..++|+|+|+++
T Consensus        34 ~~~~~~~~~~~~~--~~s~--------dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l  103 (353)
T 3vgz_A           34 MLRKAVGKGAYEM--AYSQ--------QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTL  103 (353)
T ss_dssp             EEEEEEESSEEEE--EEET--------TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEE
T ss_pred             hhhhhhccCccce--EECC--------CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEE
Confidence            3344444455555  5677        444444444 2      678999999999988888777778999999999966


Q ss_pred             EEE-eCCceEEEEecccccCcccccccccceeEEeecchhh---------hhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942        112 AVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE---------ILDIALLGEEDSHIVVASNEYLNGGDLSGL  181 (537)
Q Consensus       112 a~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~  181 (537)
                      +++ ..++.|.+||..+           ++....+..+...         +.+++|+ ++++.++++....+  +.|   
T Consensus       104 ~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~--~~i---  166 (353)
T 3vgz_A          104 WFGNTVNSAVTAIDAKT-----------GEVKGRLVLDDRKRTEEVRPLQPRELVAD-DATNTVYISGIGKE--SVI---  166 (353)
T ss_dssp             EEEETTTTEEEEEETTT-----------CCEEEEEESCCCCCCSSCCCCEEEEEEEE-TTTTEEEEEEESSS--CEE---
T ss_pred             EEEecCCCEEEEEeCCC-----------CeeEEEEecCCCccccccCCCCCceEEEC-CCCCEEEEEecCCC--ceE---
Confidence            555 4578999999998           5666666654322         5778999 67777777663322  448   


Q ss_pred             eecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccc
Q psy10942        182 VKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKR  259 (537)
Q Consensus       182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~  259 (537)
                                    .+||.       .+++..  +.     .+  ...+.++   +|+|+++++++++.++.+.  +|+.
T Consensus       167 --------------~~~d~-------~~~~~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~~~~~~i~--~~d~  213 (353)
T 3vgz_A          167 --------------WVVDG-------GNIKLKTAIQ-----NT--GKMSTGL---ALDSEGKRLYTTNADGELI--TIDT  213 (353)
T ss_dssp             --------------EEEET-------TTTEEEEEEC-----CC--CTTCCCC---EEETTTTEEEEECTTSEEE--EEET
T ss_pred             --------------EEEcC-------CCCceEEEec-----CC--CCccceE---EECCCCCEEEEEcCCCeEE--EEEC
Confidence                          88888       666655  33     34  5557788   8999999888888788777  7776


Q ss_pred             cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe
Q psy10942        260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS  339 (537)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  339 (537)
                      .++.                                .+..+...            ..++...+..++|+|+++++++++
T Consensus       214 ~~~~--------------------------------~~~~~~~~------------~~~~~~~~~~~~~s~dg~~l~~~~  249 (353)
T 3vgz_A          214 ADNK--------------------------------ILSRKKLL------------DDGKEHFFINISLDTARQRAFITD  249 (353)
T ss_dssp             TTTE--------------------------------EEEEEECC------------CSSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CCCe--------------------------------EEEEEEcC------------CCCCCcccceEEECCCCCEEEEEe
Confidence            6521                                01111110            112345678899999999877766


Q ss_pred             CC-CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942        340 LD-KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV  418 (537)
Q Consensus       340 ~d-~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~  418 (537)
                      .+ +.|.+||+. ..+.+..+...                                                   ....+
T Consensus       250 ~~~~~v~~~d~~-~~~~~~~~~~~---------------------------------------------------~~~~~  277 (353)
T 3vgz_A          250 SKAAEVLVVDTR-NGNILAKVAAP---------------------------------------------------ESLAV  277 (353)
T ss_dssp             SSSSEEEEEETT-TCCEEEEEECS---------------------------------------------------SCCCE
T ss_pred             CCCCEEEEEECC-CCcEEEEEEcC---------------------------------------------------CCceE
Confidence            54 788888887 44433333211                                                   11347


Q ss_pred             EEcCCCCEEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942        419 NFSPLDRILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       419 ~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  476 (537)
                      +|+|++++++++. .++.|.+||..+++.+..+... ..+.+++|+|++++|+++..++
T Consensus       278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred             EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence            8899998666655 6899999999999988888754 4679999999999887776654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.87  E-value=1e-21  Score=197.91  Aligned_cols=261  Identities=11%  Similarity=-0.018  Sum_probs=173.2

Q ss_pred             cceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecch-hhhhhhhcccCCCccEEEeee-ccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFS-DEILDIALLGEEDSHIVVASN-EYL  173 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~-~~~  173 (537)
                      .+|.+++|+|||++||+++. |++++||++++           ++. +.+..|. ..+..++|+ |+ +.++++.. .++
T Consensus        22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-----------g~~-~~lt~~~~~~~~~~~~s-pd-~~l~~~~~~~g~   87 (582)
T 3o4h_A           22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-----------GET-VKLNREPINSVLDPHYG-VG-RVILVRDVSKGA   87 (582)
T ss_dssp             SCEEEEEEEETTTEEEEEEEETTEEEEEEEET-----------TEE-EECCSSCCSEECEECTT-CS-EEEEEEECSTTS
T ss_pred             cchheeecCCCCCeEEEEEccCCceeEEEEcC-----------CCc-EeeecccccccccccCC-CC-eEEEEeccCCCC
Confidence            47999999999999999887 99999999866           343 4555555 579999999 55 54444432 122


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccc---ccc-cccccccccCCCcCeEEEEeccCcccCCCeee-eccC
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS---SSQ-QKHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSM  248 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~---~~~-~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~  248 (537)
                        ...                 ++|.+       ..   +.. .+.     ..   ..+...   +|+|+|+.++ +...
T Consensus        88 --~~~-----------------~l~~~-------~~~~~g~~~~l~-----~~---~~~~~~---~~s~dg~~~~~~s~~  130 (582)
T 3o4h_A           88 --EQH-----------------ALFKV-------NTSRPGEEQRLE-----AV---KPMRIL---SGVDTGEAVVFTGAT  130 (582)
T ss_dssp             --CCE-----------------EEEEE-------ETTSTTCCEECT-----TS---CSBEEE---EEEECSSCEEEEEEC
T ss_pred             --cce-----------------EEEEE-------eccCCCcccccc-----CC---CCceee---eeCCCCCeEEEEecC
Confidence              113                 34433       21   111 121     11   122345   6677775322 2222


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      ++.+.  +|+                                           +.+++...      +..+..  .+++|
T Consensus       131 ~~~~~--l~d-------------------------------------------~~~g~~~~------l~~~~~--~~~~~  157 (582)
T 3o4h_A          131 EDRVA--LYA-------------------------------------------LDGGGLRE------LARLPG--FGFVS  157 (582)
T ss_dssp             SSCEE--EEE-------------------------------------------EETTEEEE------EEEESS--CEEEE
T ss_pred             CCCce--EEE-------------------------------------------ccCCcEEE------eecCCC--ceEEE
Confidence            23333  444                                           44333211      111122  68899


Q ss_pred             cCCCCEEEEEeCC----CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        329 SPNDKLLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       329 s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +|||++|++++.+    +.|++||+. +++. ..+..+.                                .        
T Consensus       158 spDG~~la~~~~~~~~~~~i~~~d~~-~g~~-~~l~~~~--------------------------------~--------  195 (582)
T 3o4h_A          158 DIRGDLIAGLGFFGGGRVSLFTSNLS-SGGL-RVFDSGE--------------------------------G--------  195 (582)
T ss_dssp             EEETTEEEEEEEEETTEEEEEEEETT-TCCC-EEECCSS--------------------------------C--------
T ss_pred             CCCCCEEEEEEEcCCCCeEEEEEcCC-CCCc-eEeecCC--------------------------------C--------
Confidence            9999999988766    567777766 2221 1222221                                1        


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCC--cEEEEECCCceeeeEeecCCcceEEEE--------EecCCCEEEEEeC
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDA--TIKLWCLTDYVCLKSLEGHDASVLRCH--------FINKGTQIVSTGA  474 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~~  474 (537)
                               .+..++|||||++|+++..++  .|++||+.+++.. .+.+|...+..++        |+|||.++++++.
T Consensus       196 ---------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~  265 (582)
T 3o4h_A          196 ---------SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR  265 (582)
T ss_dssp             ---------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred             ---------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence                     667899999999999888888  8999999998877 7777877777777        9999999999999


Q ss_pred             CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        475 DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       475 dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      |+.+++|++  |+...   .+...+           .++   +|+ |++++++++.+..
T Consensus       266 ~g~~~l~~~--g~~~~---~~~~~v-----------~~~---~~s-dg~~l~~~s~~~~  304 (582)
T 3o4h_A          266 EGRSAVFID--GERVE---APQGNH-----------GRV---VLW-RGKLVTSHTSLST  304 (582)
T ss_dssp             TTEEEEEET--TEEEC---CCSSEE-----------EEE---EEE-TTEEEEEEEETTE
T ss_pred             CCcEEEEEE--CCeec---cCCCce-----------EEE---Eec-CCEEEEEEcCCCC
Confidence            999999999  76554   233556           777   999 9999998877654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.87  E-value=1.5e-20  Score=176.57  Aligned_cols=300  Identities=10%  Similarity=0.000  Sum_probs=187.3

Q ss_pred             eeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc--ccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE--SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      +.++++  +++.++++++.++.|.+||+++++.+..++...  ....+  .+.|.       +..++++...++.|.+||
T Consensus         3 ~g~~~~--~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~~~v~~~~~~~i~~~d   71 (349)
T 1jmx_B            3 TGPALK--AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTA--MMAPD-------NRTAYVLNNHYGDIYGID   71 (349)
T ss_dssp             -CCCCC--TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEE--EECTT-------SSEEEEEETTTTEEEEEE
T ss_pred             cccccc--CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCcee--EECCC-------CCEEEEEeCCCCcEEEEe
Confidence            456777  889999999999999999999999988887655  45555  56774       434556667789999999


Q ss_pred             ccceehhhhcCCCc-------ceEEEEEeccccEEEEEeCC------------ceEEEEecccccCcccccccccceeEE
Q psy10942         84 TSAVKELYQHGLSS-------PLVRIVRSSVKRMYAVVTAD------------HNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        84 ~~~~~~~~~~~~~~-------~v~~~~~s~~~~~la~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      +.+++.+..+....       .+..++|+|||++|++++.+            +.|.+||+.+++.        .+.+..
T Consensus        72 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--------~~~~~~  143 (349)
T 1jmx_B           72 LDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--------AKPVRT  143 (349)
T ss_dssp             TTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--------BCCSEE
T ss_pred             CCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--------cceeee
Confidence            99988776665322       37899999999999998865            8999999987311        122233


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +..+ ..+.+++|+ ++++ ++++  +.+    |                 .+||.       .+++..  +.     .+
T Consensus       144 ~~~~-~~~~~~~~s-~dg~-l~~~--~~~----i-----------------~~~d~-------~~~~~~~~~~-----~~  185 (349)
T 1jmx_B          144 FPMP-RQVYLMRAA-DDGS-LYVA--GPD----I-----------------YKMDV-------KTGKYTVALP-----LR  185 (349)
T ss_dssp             EECC-SSCCCEEEC-TTSC-EEEE--SSS----E-----------------EEECT-------TTCCEEEEEC-----ST
T ss_pred             ccCC-CcccceeEC-CCCc-EEEc--cCc----E-----------------EEEeC-------CCCceecccc-----cc
Confidence            3333 358888999 6666 5553  333    7                 88888       555443  22     11


Q ss_pred             CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC---------CcceEEEEEeC
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG---------GTVELLASGSL  293 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~~~~~  293 (537)
                        .... ..   ...|+           .+.  +|...........     .........         ..-.++.....
T Consensus       186 --~~~~-~~---~~~~~-----------~~~--~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  241 (349)
T 1jmx_B          186 --NWNR-KG---YSAPD-----------VLY--FWPHQSPRHEFSM-----LYTIARFKDDKQDPATADLLYGYLSVDLK  241 (349)
T ss_dssp             --TCCC-TT---BCCCB-----------CCC--CCCCCCTTCEEEE-----EEEEEEC-------CCCEEEEEEEEEETT
T ss_pred             --ccCC-cc---ccCcc-----------cee--eecCCCcceeEEe-----eeeeeecCCCcCCccccccceeEEEEecc
Confidence              0000 00   00111           122  3332221100000     000000000         00011112223


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEc
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~  372 (537)
                      ++.+++++..              .+...+..++|+| ++++++++  ++.|.+||+. ..+.+..+....         
T Consensus       242 ~~~~~~~~~~--------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~-~~~~~~~~~~~~---------  295 (349)
T 1jmx_B          242 TGKTHTQEFA--------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLK-QRKLIKAANLDH---------  295 (349)
T ss_dssp             TCCEEEEEEE--------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETT-TTEEEEEEECSS---------
T ss_pred             CCcEEecccc--------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECc-cCeEEEEEcCCC---------
Confidence            3444444431              2445678899999 99988887  7788888887 444443332110         


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  452 (537)
                                                               .+.+++|+|++++|++++.++.|.+||+.+++.+..++.
T Consensus       296 -----------------------------------------~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~  334 (349)
T 1jmx_B          296 -----------------------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL  334 (349)
T ss_dssp             -----------------------------------------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred             -----------------------------------------CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence                                                     456789999999888888899999999999998888765


Q ss_pred             C
Q psy10942        453 H  453 (537)
Q Consensus       453 ~  453 (537)
                      .
T Consensus       335 ~  335 (349)
T 1jmx_B          335 P  335 (349)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.86  E-value=4.9e-20  Score=172.98  Aligned_cols=282  Identities=10%  Similarity=0.051  Sum_probs=178.5

Q ss_pred             ccceEEeeecc--ceehh--hhcCCCcceEEEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeec
Q psy10942         75 EKSLLHYYETS--AVKEL--YQHGLSSPLVRIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVG  147 (537)
Q Consensus        75 ~~~~i~~wd~~--~~~~~--~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  147 (537)
                      .++.|.+|++.  +++..  ........+..++|+|||+ |++++.   ++.|.+|++.+++         .+.+..+..
T Consensus        14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~---------~~~~~~~~~   83 (347)
T 3hfq_A           14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT---------AHKLNTVVA   83 (347)
T ss_dssp             SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE---------EEEEEEEEE
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc---------EEEeeeeec
Confidence            34557777664  44432  2233346788899999999 555554   6899999997621         234455556


Q ss_pred             chhhhhhhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-ccc-cccccccc---
Q psy10942        148 FSDEILDIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-SQQ-KHNTERLG---  221 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-~~~-l~~~~~~~---  221 (537)
                      +...+..++|+ +++++|+++. .++.    +                 .+|++       ... ... +......+   
T Consensus        84 ~~~~p~~~a~s-pdg~~l~~~~~~~~~----v-----------------~v~~~-------~~~g~~~~~~~~~~~~~~p  134 (347)
T 3hfq_A           84 PGTPPAYVAVD-EARQLVYSANYHKGT----A-----------------EVMKI-------AADGALTLTDTVQHSGHGP  134 (347)
T ss_dssp             ESCCCSEEEEE-TTTTEEEEEETTTTE----E-----------------EEEEE-------CTTSCEEEEEEEECCCCCS
T ss_pred             CCCCCEEEEEC-CCCCEEEEEeCCCCE----E-----------------EEEEe-------CCCCCeeecceeecCCCCC
Confidence            77778999999 7788777765 3344    7                 88887       421 111 11000001   


Q ss_pred             ----CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        222 ----RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       222 ----h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                          +  ...+.++   +|+|+|+.+++...++.+.  +|++...                                +.+
T Consensus       135 ~~~~~--~~~~~~~---~~spdg~l~v~~~~~~~v~--~~~~~~~--------------------------------g~~  175 (347)
T 3hfq_A          135 RPEQD--GSHIHYT---DLTPDNRLAVIDLGSDKVY--VYNVSDA--------------------------------GQL  175 (347)
T ss_dssp             STTCS--SCCEEEE---EECTTSCEEEEETTTTEEE--EEEECTT--------------------------------SCE
T ss_pred             Ccccc--CCCceEE---EECCCCcEEEEeCCCCEEE--EEEECCC--------------------------------CcE
Confidence                2  2357889   9999999666666677888  8887631                                111


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEccCC-cee--eEEEEecCCCCEEEEEcC
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS-GSLDKTVKVWSTTGG-LKL--LNVLRGHKKGTQIVSTGA  373 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~-~~~--~~~~~~~~~~~~l~~~~~  373 (537)
                      ....            .........+..++|+|||+++++ ...++.+.+|++... .+.  +..+...+.+        
T Consensus       176 ~~~~------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~--------  235 (347)
T 3hfq_A          176 SEQS------------VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD--------  235 (347)
T ss_dssp             EEEE------------EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT--------
T ss_pred             EEee------------eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC--------
Confidence            1000            000011224678999999996666 456789999998731 221  1111111110        


Q ss_pred             CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE-EEeCCCcEEEEECC---CceeeeE
Q psy10942        374 DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI-SSSGDATIKLWCLT---DYVCLKS  449 (537)
Q Consensus       374 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~---~~~~~~~  449 (537)
                                       +...                  ..+..++|+|||++|+ +...++.|.+|++.   ..+.+..
T Consensus       236 -----------------~~~~------------------~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~  280 (347)
T 3hfq_A          236 -----------------YTAH------------------NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ  280 (347)
T ss_dssp             -----------------CCSC------------------CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             -----------------CCCC------------------CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence                             0000                  0577899999999875 55568999999987   3355666


Q ss_pred             eecCCcceEEEEEecCCCEEEEEeCC-CcEEEE--ECCCCeeE
Q psy10942        450 LEGHDASVLRCHFINKGTQIVSTGAD-GLLKLW--SIKTSTCV  489 (537)
Q Consensus       450 ~~~~~~~v~~~~~s~~~~~l~s~~~d-g~v~vw--d~~~~~~~  489 (537)
                      +..+...+..++|+|||++|++++.+ +.|.+|  |..+|++.
T Consensus       281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence            66666778999999999999888765 899999  55667655

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=1.5e-21  Score=201.93  Aligned_cols=336  Identities=10%  Similarity=0.015  Sum_probs=206.5

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcc----eEEEEEeccccEEEEEeC---------CceEEEEecccccCcc
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSP----LVRIVRSSVKRMYAVVTA---------DHNISLYRLNSETGLE  132 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~----v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~~~~~~  132 (537)
                      ++.+++++ .++.|++||+.+++....+..+..    +.+++|||||++||+++.         ++.|++||+.++    
T Consensus        26 dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g----  100 (719)
T 1z68_A           26 GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG----  100 (719)
T ss_dssp             SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT----
T ss_pred             CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC----
Confidence            55666655 589999999999987766665533    899999999999999876         789999999983    


Q ss_pred             ccccccccee--EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc
Q psy10942        133 ERPNKILKFR--KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS  210 (537)
Q Consensus       133 ~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~  210 (537)
                             +.+  ..+   ...+..++|+ |+++.|+++. ++.    |                 ++|++       .++
T Consensus       101 -------~~~~~~~l---~~~~~~~~~S-PDG~~la~~~-~~~----i-----------------~~~~~-------~~g  140 (719)
T 1z68_A          101 -------EFVRGNEL---PRPIQYLCWS-PVGSKLAYVY-QNN----I-----------------YLKQR-------PGD  140 (719)
T ss_dssp             -------EECCSSCC---CSSBCCEEEC-SSTTCEEEEE-TTE----E-----------------EEESS-------TTS
T ss_pred             -------ccccceec---CcccccceEC-CCCCEEEEEE-CCe----E-----------------EEEeC-------CCC
Confidence                   331  122   2358889999 7888888764 445    8                 99998       666


Q ss_pred             ccc-ccccccccCCCcCeE-----------------EEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccccccc
Q psy10942        211 SQQ-KHNTERLGRDELKTV-----------------TLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFV  271 (537)
Q Consensus       211 ~~~-l~~~~~~~h~~~~~v-----------------~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~  271 (537)
                      +.. +..   .++  ...|                 .++   +|||||++|++++.| +.+.  +|.+.......    .
T Consensus       141 ~~~~l~~---~~~--~~~v~~g~~~~v~~ee~~~~~~~~---~wSPDG~~la~~~~d~~~~~--~~~~~~~~~~~----~  206 (719)
T 1z68_A          141 PPFQITF---NGR--ENKIFNGIPDWVYEEEMLATKYAL---WWSPNGKFLAYAEFNDTDIP--VIAYSYYGDEQ----Y  206 (719)
T ss_dssp             CCEECCC---CCB--TTTEEESSCCHHHHHHTTCSSCCE---EECTTSSEEEEEEEECTTSC--EEEEEECCSSS----S
T ss_pred             CcEEEec---CCC--cCCeEcccccceeeeecccCcccE---EECCCCCEEEEEEECCCCCc--eEEeeccCCCC----C
Confidence            554 220   022  2222                 478   999999999988765 5566  66543321110    0


Q ss_pred             cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee--eeee-cccccccCCCeEEEEEcCCCCEEEEEeCCC----cE
Q psy10942        272 PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL--LNVL-RGHKKGHEKDINCVTVSPNDKLLASGSLDK----TV  344 (537)
Q Consensus       272 ~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~--~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i  344 (537)
                      +....+.....+.      ......|++||+.+++..  ..+. ...+..|...+..++|+||++++++....+    .|
T Consensus       207 ~~~~~~~yp~~g~------~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l  280 (719)
T 1z68_A          207 PRTINIPYPKAGA------KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL  280 (719)
T ss_dssp             CEEEEEECCBTTS------CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred             ccceeecCCCCCC------CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence            0011111111100      012247899999887631  1110 023456788899999999987776643222    25


Q ss_pred             EEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee----ccCCcceEEEEEecCCCceEEeeee----
Q psy10942        345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF----DKHALKIWTLAITKDENQIITGGVW----  416 (537)
Q Consensus       345 ~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~i~----  416 (537)
                      .+||+...                             ..+++....+    ..+..                 .+.    
T Consensus       281 ~~~d~~~~-----------------------------~~~g~~~~~~~~~~~~~~~-----------------~~~~~~~  314 (719)
T 1z68_A          281 SICDFRED-----------------------------WQTWDCPKTQEHIEESRTG-----------------WAGGFFV  314 (719)
T ss_dssp             EEEEECSS-----------------------------SSSEECCGGGEEEEECSSS-----------------CSSSSSC
T ss_pred             EEEcccCC-----------------------------CCCCceEEEEecccccCCc-----------------eEccccC
Confidence            66661100                             2222222111    11211                 222    


Q ss_pred             -EEEEcCCCCEEEE--EeCCC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCC-
Q psy10942        417 -FVNFSPLDRILIS--SSGDA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKT-  485 (537)
Q Consensus       417 -~~~~s~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~-  485 (537)
                       .++|+|||+.++.  ...+|  .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+     +..++|.+.. 
T Consensus       315 ~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~  392 (719)
T 1z68_A          315 STPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG  392 (719)
T ss_dssp             CCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred             CccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence             5678999885554  44455  57777877765 45566566678888888 88877766655     7888988753 


Q ss_pred             -Ce-eEEEec----CCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        486 -ST-CVSTFD----KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       486 -~~-~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                       +. ....+.    +|...+           ..+   .|+||+++|+..
T Consensus       393 ~g~~~~~~l~~~~~~~~~~~-----------~~~---~~s~dg~~l~~~  427 (719)
T 1z68_A          393 SYPPSKKCVTCHLRKERCQY-----------YTA---SFSDYAKYYALV  427 (719)
T ss_dssp             SSSCCEEESSTTTTTTTBCB-----------EEE---EECGGGSSEEEE
T ss_pred             CCCCCceeccCccCCCCCce-----------EEE---EECCCCCEEEEE
Confidence             32 123332    144445           566   999999988753

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.84  E-value=1.9e-20  Score=178.68  Aligned_cols=316  Identities=11%  Similarity=-0.039  Sum_probs=190.6

Q ss_pred             eeeccceehhhhcCCCc-ceEE-----EEEeccccEEEEEeC-Cc--eEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         81 YYETSAVKELYQHGLSS-PLVR-----IVRSSVKRMYAVVTA-DH--NISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        81 ~wd~~~~~~~~~~~~~~-~v~~-----~~~s~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                      .+|..++..+..+..+. ....     .+|||||++||+++. ++  .|.+||+.+           ++......++...
T Consensus        14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-----------g~~~~lt~~~~~~   82 (388)
T 3pe7_A           14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT-----------QVATQLTEGRGDN   82 (388)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------CEEEECCCSSCBC
T ss_pred             EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC-----------CceEEeeeCCCCC
Confidence            34666676666666543 3444     789999999999887 66  478888887           5655555666666


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVT  229 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~  229 (537)
                      +..++|+ |+++.|+++..+..    +                 ++||+       .+++..  ..     .+  ...+.
T Consensus        83 ~~~~~~s-pdg~~l~~~~~~~~----l-----------------~~~d~-------~~g~~~~~~~-----~~--~~~~~  126 (388)
T 3pe7_A           83 TFGGFLS-PDDDALFYVKDGRN----L-----------------MRVDL-------ATLEENVVYQ-----VP--AEWVG  126 (388)
T ss_dssp             SSSCEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEEE-----CC--TTEEE
T ss_pred             ccceEEc-CCCCEEEEEeCCCe----E-----------------EEEEC-------CCCcceeeee-----ch--hhccc
Confidence            6678899 78888888876666    8                 88998       776655  33     34  44443


Q ss_pred             EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942        230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      ...+ .++|++++++....++.    -|.....   ..        .+.        .......+..|.+||+.+++.. 
T Consensus       127 ~~~~-~~~~dg~~l~~~~~~~~----~~~~~~~---~~--------~~~--------~~~~~~~~~~l~~~d~~~g~~~-  181 (388)
T 3pe7_A          127 YGTW-VANSDCTKLVGIEIRRE----DWVPLTD---WK--------KFH--------EFYFTKPCCRLMRVDLKTGEST-  181 (388)
T ss_dssp             EEEE-EECTTSSEEEEEEEEGG----GCCCCCS---HH--------HHH--------HHGGGCCCEEEEEEETTTCCEE-
T ss_pred             ccce-eECCCCCeeccccccCc----ccccccc---cc--------hhh--------hhhccCCcceEEEEECCCCceE-
Confidence            3300 34888888774321111    0100000   00        000        0001122467899999887632 


Q ss_pred             eeecccccccCCCeEEEEEcC-CCCEEEEEeCCC------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942        310 NVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDK------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  382 (537)
                           .+..+...+..++|+| ||+.|+....++      .|.++|+.                                
T Consensus       182 -----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~--------------------------------  224 (388)
T 3pe7_A          182 -----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED--------------------------------  224 (388)
T ss_dssp             -----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT--------------------------------
T ss_pred             -----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC--------------------------------
Confidence                 2334566789999999 999988876532      44444443                                


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CC----cEEEEECCCceeee--EeecCCc
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DA----TIKLWCLTDYVCLK--SLEGHDA  455 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg----~i~i~d~~~~~~~~--~~~~~~~  455 (537)
                       .++... +..+...               ..+...+|+|||+.|+..+. ++    .|++||+.+++...  .+.++..
T Consensus       225 -~~~~~~-l~~~~~~---------------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~  287 (388)
T 3pe7_A          225 -GTNMRK-VKTHAEG---------------ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH  287 (388)
T ss_dssp             -SCCCEE-SCCCCTT---------------EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred             -CCceEE-eeeCCCC---------------cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence             221111 1111100               03556779999987765443 22    39999999876432  3332111


Q ss_pred             c---eEEEEEecCCCEEEEE---------eCCCcEEEEECCCCeeEEEecCCcc-----------ceeccCCCCCCcccc
Q psy10942        456 S---VLRCHFINKGTQIVST---------GADGLLKLWSIKTSTCVSTFDKHAL-----------KIRNSDSENDHKGFG  512 (537)
Q Consensus       456 ~---v~~~~~s~~~~~l~s~---------~~dg~v~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~~~~~  512 (537)
                      .   ...++|+|||+.|+..         ..+..|++||+.+++. ..+..+..           .+           ..
T Consensus       288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~-----------~~  355 (388)
T 3pe7_A          288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTH-----------PH  355 (388)
T ss_dssp             EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTC-----------CC
T ss_pred             eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCC-----------CC
Confidence            0   1224799999988854         4466899999988775 44544544           34           66


Q ss_pred             ccceeeecCCCEEEEEe-CCCCEEeC
Q psy10942        513 LPRQLCSRNSDCEYRGG-WSPQVVVY  537 (537)
Q Consensus       513 ~~~~~~s~~~~~l~s~~-~dg~i~vW  537 (537)
                      +   +|+|||+.|+.++ .+|...||
T Consensus       356 ~---~~spDg~~l~~~s~~~g~~~l~  378 (388)
T 3pe7_A          356 P---SFTPDDKQILFTSDVHGKPALY  378 (388)
T ss_dssp             C---EECTTSSEEEEEECTTSSCEEE
T ss_pred             c---cCCCCCCEEEEEecCCCceeEE
Confidence            7   9999999888665 46766665

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.84  E-value=4.5e-19  Score=166.36  Aligned_cols=286  Identities=10%  Similarity=0.073  Sum_probs=178.3

Q ss_pred             EEEEEe----CCceEEEEecccccCcccccccccceeE-EeecchhhhhhhhcccCCCccEEEeeec-cccCCcccceee
Q psy10942        110 MYAVVT----ADHNISLYRLNSETGLEERPNKILKFRK-QFVGFSDEILDIALLGEEDSHIVVASNE-YLNGGDLSGLVK  183 (537)
Q Consensus       110 ~la~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~  183 (537)
                      .+++++    .++.|.+|+++..+         ++... ....+...+..++|+ ++++ |++++.. .+  +.|     
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~t---------g~~~~~~~~~~~~~p~~~a~s-pdg~-l~~~~~~~~~--~~v-----   65 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTA---------KTLTNDGLLAATQNPTYLALS-AKDC-LYSVDKEDDE--GGI-----   65 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTT---------TEEEEEEEEEECSCCCCEEEC-TTCE-EEEEEEETTE--EEE-----
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCC---------CeEEEeeeeeccCCcceEEEc-cCCe-EEEEEecCCC--ceE-----
Confidence            455553    24568888776521         22221 233455668889999 6777 6655542 12  338     


Q ss_pred             cccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccC
Q psy10942        184 LGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKT  261 (537)
Q Consensus       184 ~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~  261 (537)
                                  .+|++       ..+... +.  ....+  ...+..+   +|+|+|++|++++ .++.+.  +|++..
T Consensus        66 ------------~~~~~-------~~g~~~~~~--~~~~~--~~~p~~~---a~spdg~~l~~~~~~~~~v~--v~~~~~  117 (347)
T 3hfq_A           66 ------------AAWQI-------DGQTAHKLN--TVVAP--GTPPAYV---AVDEARQLVYSANYHKGTAE--VMKIAA  117 (347)
T ss_dssp             ------------EEEEE-------ETTEEEEEE--EEEEE--SCCCSEE---EEETTTTEEEEEETTTTEEE--EEEECT
T ss_pred             ------------EEEEe-------cCCcEEEee--eeecC--CCCCEEE---EECCCCCEEEEEeCCCCEEE--EEEeCC
Confidence                        88988       655433 21  01146  6678889   9999999888776 678899  999864


Q ss_pred             CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC
Q psy10942        262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD  341 (537)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  341 (537)
                      ... ..                            .+..........     .  ...+...+.+++|+|+|+++++...+
T Consensus       118 ~g~-~~----------------------------~~~~~~~~~~~p-----~--~~~~~~~~~~~~~spdg~l~v~~~~~  161 (347)
T 3hfq_A          118 DGA-LT----------------------------LTDTVQHSGHGP-----R--PEQDGSHIHYTDLTPDNRLAVIDLGS  161 (347)
T ss_dssp             TSC-EE----------------------------EEEEEECCCCCS-----S--TTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred             CCC-ee----------------------------ecceeecCCCCC-----C--ccccCCCceEEEECCCCcEEEEeCCC
Confidence            210 00                            000011110000     0  11234568899999999966666678


Q ss_pred             CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942        342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS  421 (537)
Q Consensus       342 ~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s  421 (537)
                      +.|++|++...++........                   ...+          .                 .+..++|+
T Consensus       162 ~~v~~~~~~~~g~~~~~~~~~-------------------~~~g----------~-----------------~p~~~~~s  195 (347)
T 3hfq_A          162 DKVYVYNVSDAGQLSEQSVLT-------------------MEAG----------F-----------------GPRHLVFS  195 (347)
T ss_dssp             TEEEEEEECTTSCEEEEEEEE-------------------CCTT----------C-----------------CEEEEEEC
T ss_pred             CEEEEEEECCCCcEEEeeeEE-------------------cCCC----------C-----------------CCceEEEC
Confidence            889999987322221111000                   0000          0                 45678999


Q ss_pred             CCCCEEEEE-eCCCcEEEEECCC--cee--eeEeecCC------cceEEEEEecCCCEEE-EEeCCCcEEEEECCC---C
Q psy10942        422 PLDRILISS-SGDATIKLWCLTD--YVC--LKSLEGHD------ASVLRCHFINKGTQIV-STGADGLLKLWSIKT---S  486 (537)
Q Consensus       422 ~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~---~  486 (537)
                      |||++++++ ..++.|.+|++..  ++.  +..+....      ..+..++|+|||++|+ +...++.|.+|++..   .
T Consensus       196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~  275 (347)
T 3hfq_A          196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL  275 (347)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred             CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence            999966664 5678999999874  443  23333322      3488999999999875 555689999999872   2


Q ss_pred             eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC-CCEEeC
Q psy10942        487 TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS-PQVVVY  537 (537)
Q Consensus       487 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d-g~i~vW  537 (537)
                      +.+..+..+...+           ..+   +|+|||++|++++.+ +.|.+|
T Consensus       276 ~~~~~~~~~~~~~-----------~~~---~~spdg~~l~v~~~~~~~v~v~  313 (347)
T 3hfq_A          276 TLIQQISTEGDFP-----------RDF---DLDPTEAFVVVVNQNTDNATLY  313 (347)
T ss_dssp             EEEEEEECSSSCC-----------CEE---EECTTSSEEEEEETTTTEEEEE
T ss_pred             EEeEEEecCCCCc-----------CeE---EECCCCCEEEEEEcCCCcEEEE
Confidence            4555555555556           778   999999999888764 788876

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.84  E-value=2.8e-19  Score=167.92  Aligned_cols=305  Identities=10%  Similarity=0.015  Sum_probs=187.6

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCc--ceEEEEEeccccEEEEE-eCCceEEEEecccccCccccccccccee
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSS--PLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFR  142 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~--~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~  142 (537)
                      ++.++++++.++.|.+||+.+++.+..+..+.  .+..++|+|||++++++ ..++.|.+||+.+           .+..
T Consensus        10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-----------~~~~   78 (349)
T 1jmx_B           10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-----------CKNT   78 (349)
T ss_dssp             TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-----------TEEE
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-----------CcEE
Confidence            66888898899999999999999888777665  78899999999876544 4688999999988           5555


Q ss_pred             EEeecc------hhhhhhhhcccCCCccEEEeeeccc--------cCCcccceeecccCCCcchhhHHHHHHHHHhhhcc
Q psy10942        143 KQFVGF------SDEILDIALLGEEDSHIVVASNEYL--------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ  208 (537)
Q Consensus       143 ~~~~~~------~~~v~~~~~~~~~~~~l~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~  208 (537)
                      ..+..+      ...+..++|+ +++++++++..+..        ..+.|                 .+||+       .
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i-----------------~~~d~-------~  133 (349)
T 1jmx_B           79 FHANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRL-----------------EVFST-------A  133 (349)
T ss_dssp             EEEESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEE-----------------EEEEG-------G
T ss_pred             EEEEcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeE-----------------EEEEC-------C
Confidence            555532      2337889999 78888887775400        01237                 88998       6


Q ss_pred             ccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcce
Q psy10942        209 SSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVE  286 (537)
Q Consensus       209 ~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  286 (537)
                      +++..  +.   ...+  ...+.++   +|+|+|+ ++.++.  .+.  +|+..++....         .+.........
T Consensus       134 ~~~~~~~~~---~~~~--~~~~~~~---~~s~dg~-l~~~~~--~i~--~~d~~~~~~~~---------~~~~~~~~~~~  191 (349)
T 1jmx_B          134 DGLEAKPVR---TFPM--PRQVYLM---RAADDGS-LYVAGP--DIY--KMDVKTGKYTV---------ALPLRNWNRKG  191 (349)
T ss_dssp             GGGGBCCSE---EEEC--CSSCCCE---EECTTSC-EEEESS--SEE--EECTTTCCEEE---------EECSTTCCCTT
T ss_pred             Cccccceee---eccC--CCcccce---eECCCCc-EEEccC--cEE--EEeCCCCceec---------cccccccCCcc
Confidence            54332  11   0023  4467888   8999999 555443  388  99987742110         00000000000


Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEEccCCceeeEEEEecCCC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-TVKVWSTTGGLKLLNVLRGHKKG  365 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~  365 (537)
                      .   . ....+.+|........           ......+++++++.......... .+..++.                
T Consensus       192 ~---~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----------------  240 (349)
T 1jmx_B          192 Y---S-APDVLYFWPHQSPRHE-----------FSMLYTIARFKDDKQDPATADLLYGYLSVDL----------------  240 (349)
T ss_dssp             B---C-CCBCCCCCCCCCTTCE-----------EEEEEEEEEC-------CCCEEEEEEEEEET----------------
T ss_pred             c---c-CccceeeecCCCccee-----------EEeeeeeeecCCCcCCccccccceeEEEEec----------------
Confidence            0   0 0001112221111100           00123455555442111000000 0111222                


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCc
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                             .++.++++++..         ...                 .+..++|+| ++++++++  ++.|.+||+.++
T Consensus       241 -------~~~~~~~~~~~~---------~~~-----------------~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~  285 (349)
T 1jmx_B          241 -------KTGKTHTQEFAD---------LTE-----------------LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR  285 (349)
T ss_dssp             -------TTCCEEEEEEEE---------CSS-----------------CEEEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred             -------cCCcEEeccccc---------CCC-----------------cceeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence                   223344443311         000                 567889999 99999988  789999999999


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                      +.+..+... ..+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus       286 ~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          286 KLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             eEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            988887743 45789999999999998888999999999999998888655

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.84  E-value=1.8e-18  Score=178.76  Aligned_cols=373  Identities=9%  Similarity=0.005  Sum_probs=206.6

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc--cccee--eeEeecCccccccCCcEEEEEeCcc----
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE--SLETC--AVFHLSDETESKSGGKTFVLAGGEK----   76 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----   76 (537)
                      ..++.|+  +|+++++++  ||.|++||+++++....+....  .....  .+.++|        ++++++.++.+    
T Consensus        19 ~~~~~w~--~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--------dg~~l~~~~~~~~~~   86 (740)
T 4a5s_A           19 LYSLRWI--SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--------DGQFILLEYNYVKQW   86 (740)
T ss_dssp             CCCEEEC--SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--------TSSEEEEEEEEEECS
T ss_pred             ccccEEC--CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--------CCCEEEEEECCeeeE
Confidence            4578899  899999987  8999999999998776655322  11111  135677        66777777755    


Q ss_pred             -----ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         77 -----SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        77 -----~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                           +.+.+||+.+++......+.+.+...+|||||+.||.+. ++.|++|++.++           +.. .+.     
T Consensus        87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~-----------~~~-~lt-----  148 (740)
T 4a5s_A           87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL-----------PSY-RIT-----  148 (740)
T ss_dssp             SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS-----------CCE-ECC-----
T ss_pred             EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC-----------ceE-EEc-----
Confidence                 667799999998765444567899999999999999885 588999999883           322 221     


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLL  231 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~  231 (537)
                           +. .....+.-  +..+                      .+|..       +.               ......+
T Consensus       149 -----~~-g~~~~~~~--g~~~----------------------~v~~e-------e~---------------~~~~~~~  176 (740)
T 4a5s_A          149 -----WT-GKEDIIYN--GITD----------------------WVYEE-------EV---------------FSAYSAL  176 (740)
T ss_dssp             -----SC-CBTTTEEE--SBCC----------------------HHHHH-------HT---------------SSSSBCE
T ss_pred             -----CC-CCccceec--Cccc----------------------ccccc-------hh---------------cCCCcce
Confidence                 11 01111111  1111                      44443       11               1112355


Q ss_pred             eccCcccCCCeeeeccCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC--CCeEEEEECCC---C
Q psy10942        232 ERGKTVKEEDLFPRQSMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL--DKTVKVWSTTG---G  305 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--d~~i~i~~~~~---~  305 (537)
                         .|||||++||..+.|.. +.  +|++.......  ...+....+....        .|..  ...|++||+.+   +
T Consensus       177 ---~wSpDg~~la~~~~d~~~v~--~~~~~~~~~~~--~~~~~~~~~~yp~--------~G~~~~~~~l~v~d~~~~~~~  241 (740)
T 4a5s_A          177 ---WWSPNGTFLAYAQFNDTEVP--LIEYSFYSDES--LQYPKTVRVPYPK--------AGAVNPTVKFFVVNTDSLSSV  241 (740)
T ss_dssp             ---EECTTSSEEEEEEEECTTCC--EEEEEECCSTT--CSSCEEEEEECCB--------TTSCCCEEEEEEEETTSCCSS
T ss_pred             ---EECCCCCEEEEEEEcccCCc--eEEEEeecCCC--CCCCcceeecCCC--------CcCcCCeeEEEEEECCCCCCC
Confidence               78888888887765544 77  77664321110  0000011111111        1111  12688899988   6


Q ss_pred             c--eeeeee-cccccccCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942        306 L--KLLNVL-RGHKKGHEKDINCVTVSPNDKLLASGSL----DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK  378 (537)
Q Consensus       306 ~--~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  378 (537)
                      .  ....+. ...+.+|...+..++|+|||+.++....    +..|++||+.++.......                   
T Consensus       242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~-------------------  302 (740)
T 4a5s_A          242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL-------------------  302 (740)
T ss_dssp             SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC-------------------
T ss_pred             CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee-------------------
Confidence            2  111110 0111247778999999999996665432    2357777776322000000                   


Q ss_pred             EEECCCCeeeeee--ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE-EEeC-C--CcEEEEECCCceeeeEeec
Q psy10942        379 LWSIKTSTCVSTF--DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI-SSSG-D--ATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       379 i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~-d--g~i~i~d~~~~~~~~~~~~  452 (537)
                              ....+  ..+...+..            ......+|+|||+.|+ ..+. +  ..|++||+.+++... +..
T Consensus       303 --------~~~~l~~~~~~~~v~~------------~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~  361 (740)
T 4a5s_A          303 --------VARQHIEMSTTGWVGR------------FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITK  361 (740)
T ss_dssp             --------GGGCEEEECSSSCSSS------------SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCC
T ss_pred             --------EEEEeeeccCCceEcc------------CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-ccc
Confidence                    00000  111111000            0123567899998777 5553 3  368888988765544 333


Q ss_pred             CCcceEEEEEecCCCEEEEEeCC-----C--cEEEEECCCCeeEEEecC----CccceeccCCCCCCccccccceeeecC
Q psy10942        453 HDASVLRCHFINKGTQIVSTGAD-----G--LLKLWSIKTSTCVSTFDK----HALKIRNSDSENDHKGFGLPRQLCSRN  521 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~~l~s~~~d-----g--~v~vwd~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~s~~  521 (537)
                      ....+..+.. +|++.|+..+..     +  .|+..++..++....+..    .....           ...   .|||+
T Consensus       362 g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~-----------~~~---~~S~d  426 (740)
T 4a5s_A          362 GTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQY-----------YSV---SFSKE  426 (740)
T ss_dssp             SSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCB-----------EEE---EECTT
T ss_pred             CCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCce-----------EEE---EECCC
Confidence            4455665543 446666544432     3  344455544333223331    11233           566   99999


Q ss_pred             CCEEEEEe
Q psy10942        522 SDCEYRGG  529 (537)
Q Consensus       522 ~~~l~s~~  529 (537)
                      +++++...
T Consensus       427 g~~~~~~~  434 (740)
T 4a5s_A          427 AKYYQLRC  434 (740)
T ss_dssp             SSEEEEEE
T ss_pred             CCEEEEEe
Confidence            99876543

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.83  E-value=5.1e-20  Score=185.45  Aligned_cols=232  Identities=9%  Similarity=0.007  Sum_probs=156.8

Q ss_pred             eeeeeeeeeccCCcceEEEecC-cceEEEEEcCccceeeeeccc-cccceeeeEeecCccccccCCcEEEEEeCc---cc
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGR-DKVLFTWDLSSRKQLRSYPAY-ESLETCAVFHLSDETESKSGGKTFVLAGGE---KS   77 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~-~g~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   77 (537)
                      ..|.+++|+  +||+.|++++. +|+++||++++++..+..... ..+...  .++|        + ++++++..   +.
T Consensus        22 ~~~~~~~~~--~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~--~~sp--------d-~~l~~~~~~~g~~   88 (582)
T 3o4h_A           22 VEKYSLQGV--VDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDP--HYGV--------G-RVILVRDVSKGAE   88 (582)
T ss_dssp             SCEEEEEEE--ETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEE--CTTC--------S-EEEEEEECSTTSC
T ss_pred             cchheeecC--CCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccc--cCCC--------C-eEEEEeccCCCCc
Confidence            468899999  89999999876 999999999777655544333 244555  5566        6 67776653   44


Q ss_pred             eEEeeeccc---eehhhhcCCCcceEEEEEeccccE--EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942         78 LLHYYETSA---VKELYQHGLSSPLVRIVRSSVKRM--YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI  152 (537)
Q Consensus        78 ~i~~wd~~~---~~~~~~~~~~~~v~~~~~s~~~~~--la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  152 (537)
                      ...+|.+..   +... .+.....+...+|+|||+.  ++++. ++.+.+||+.+           ++..... .+..  
T Consensus        89 ~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~-~~~~~l~d~~~-----------g~~~~l~-~~~~--  152 (582)
T 3o4h_A           89 QHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGAT-EDRVALYALDG-----------GGLRELA-RLPG--  152 (582)
T ss_dssp             CEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEEC-SSCEEEEEEET-----------TEEEEEE-EESS--
T ss_pred             ceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecC-CCCceEEEccC-----------CcEEEee-cCCC--
Confidence            455655433   2222 3443444557788998864  44434 44566999988           4443333 3333  


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      .+++|+ |+++.|++++.+..+...|                 ++||+       .+++.. +.     .|  ...+..+
T Consensus       153 ~~~~~s-pDG~~la~~~~~~~~~~~i-----------------~~~d~-------~~g~~~~l~-----~~--~~~~~~~  200 (582)
T 3o4h_A          153 FGFVSD-IRGDLIAGLGFFGGGRVSL-----------------FTSNL-------SSGGLRVFD-----SG--EGSFSSA  200 (582)
T ss_dssp             CEEEEE-EETTEEEEEEEEETTEEEE-----------------EEEET-------TTCCCEEEC-----CS--SCEEEEE
T ss_pred             ceEEEC-CCCCEEEEEEEcCCCCeEE-----------------EEEcC-------CCCCceEee-----cC--CCccccc
Confidence            788999 7889988777763322338                 88998       777766 77     88  8899999


Q ss_pred             eccCcccCCCeeeeccCCC--cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942        232 ERGKTVKEEDLFPRQSMEP--STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~--~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                         +|+|||++|+++..++  .|.  +|++.++                                           +.. 
T Consensus       201 ---~~SpDG~~l~~~~~~~~~~i~--~~d~~~~-------------------------------------------~~~-  231 (582)
T 3o4h_A          201 ---SISPGMKVTAGLETAREARLV--TVDPRDG-------------------------------------------SVE-  231 (582)
T ss_dssp             ---EECTTSCEEEEEECSSCEEEE--EECTTTC-------------------------------------------CEE-
T ss_pred             ---eECCCCCEEEEccCCCeeEEE--EEcCCCC-------------------------------------------cEE-
Confidence               9999999999777776  566  6666542                                           210 


Q ss_pred             eeecccccccCCCe--------EEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942        310 NVLRGHKKGHEKDI--------NCVTVSPNDKLLASGSLDKTVKVWST  349 (537)
Q Consensus       310 ~~~~~~~~~~~~~v--------~~~~~s~~~~~l~~~~~d~~i~i~d~  349 (537)
                           .+..|...+        ....|+|||.++++++.|+.+++|++
T Consensus       232 -----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          232 -----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             -----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             -----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence                 111222223        34449999988999999999999998

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.82  E-value=3.2e-19  Score=171.47  Aligned_cols=180  Identities=11%  Similarity=0.085  Sum_probs=143.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC------------------------ceeeEEEEecCCCCEEE----EEc
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGG------------------------LKLLNVLRGHKKGTQIV----STG  372 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~------------------------~~~~~~~~~~~~~~~l~----~~~  372 (537)
                      ..++.+++++++.++++++.|+ +++|+....                        ...+..+..++++.+++    +++
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs  115 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE  115 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred             CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence            4578899999999999999888 888875310                        01267788889999999    788


Q ss_pred             CCCcEEEEECCCC--------ee---eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEE
Q psy10942        373 ADGLLKLWSIKTS--------TC---VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWC  440 (537)
Q Consensus       373 ~d~~i~i~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d  440 (537)
                      .|+.|++||+.++        +.   +..+.+|..                 .|.+++|+|+ +++|++++.||+|++||
T Consensus       116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-----------------~V~~v~~~p~~~~~las~s~Dg~v~iwD  178 (434)
T 2oit_A          116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-----------------MVIDMKWNPTVPSMVAVCLADGSIAVLQ  178 (434)
T ss_dssp             TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-----------------SEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             CCceEEEEEccccccCCcCCcceeeeeeccCCCCC-----------------ceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence            9999999998754        11   233344444                 7888899997 78999999999999999


Q ss_pred             CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc-------cceeccCCCCCCccccc
Q psy10942        441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA-------LKIRNSDSENDHKGFGL  513 (537)
Q Consensus       441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~~~  513 (537)
                      ++++..+....+|...|.+++|+|+|++|++++.||.|++||++ ++....+..|.       ..+           .++
T Consensus       179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v-----------~~v  246 (434)
T 2oit_A          179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV-----------LDV  246 (434)
T ss_dssp             ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE-----------EEE
T ss_pred             cCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE-----------EEE
Confidence            99988777777899999999999999999999999999999997 66666665443       255           777


Q ss_pred             cceeeecCCCEEEEE-eCCCC
Q psy10942        514 PRQLCSRNSDCEYRG-GWSPQ  533 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~-~~dg~  533 (537)
                         +|++++.++++. +.||.
T Consensus       247 ---~w~~~~~~l~~~~~~dg~  264 (434)
T 2oit_A          247 ---LWIGTYVFAIVYAAADGT  264 (434)
T ss_dssp             ---EEEETTEEEEEEEETTCC
T ss_pred             ---EEecCceEEEEEccCCCc
Confidence               999999888653 34543

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.82  E-value=2.9e-18  Score=164.74  Aligned_cols=171  Identities=13%  Similarity=0.028  Sum_probs=125.3

Q ss_pred             cCCCcCeEEEEeccCcccCCCeee----eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFP----RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~----~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                      .+  ...|.++   +|+|++++|+    +++.|+.|+  +|++........                             
T Consensus        90 ~~--~~~v~~l---~~spdg~~lav~~~sgs~d~~v~--iwd~~~~~~~~~-----------------------------  133 (434)
T 2oit_A           90 PM--KFPIHHL---ALSCDNLTLSACMMSSEYGSIIA--FFDVRTFSNEAK-----------------------------  133 (434)
T ss_dssp             CC--SSCEEEE---EECTTSCEEEEEEEETTTEEEEE--EEEHHHHHCTTC-----------------------------
T ss_pred             cC--CCcccEE---EEcCCCCEEEEEEeccCCCceEE--EEEccccccCCc-----------------------------
Confidence            45  7789999   9999999999    899999999  999876210000                             


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCC
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~  375 (537)
                            ...+... . ...+.+|...|.+++|+|+ +++|++++.||.|++||++ ..........|..           
T Consensus       134 ------~~~~~~~-~-~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~-~~~~~~~~~~~~~-----------  193 (434)
T 2oit_A          134 ------QQKRPFA-Y-HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT-ETVKVCATLPSTV-----------  193 (434)
T ss_dssp             ------SSCCCSE-E-EECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES-SSEEEEEEECGGG-----------
T ss_pred             ------CCcceee-e-eeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC-CCcceeeccCCCC-----------
Confidence                  0000000 0 2234578899999999998 8899999999999999998 3333222222222           


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--  453 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--  453 (537)
                                                            .+.+++|+|+|++|++|+.||.|++||.+ ++....+..|  
T Consensus       194 --------------------------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~  234 (434)
T 2oit_A          194 --------------------------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF  234 (434)
T ss_dssp             --------------------------------------CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT
T ss_pred             --------------------------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc
Confidence                                                  78999999999999999999999999998 5555555443  


Q ss_pred             -----CcceEEEEEecCCCEEEEE-eCCCc------EEEEECCCC
Q psy10942        454 -----DASVLRCHFINKGTQIVST-GADGL------LKLWSIKTS  486 (537)
Q Consensus       454 -----~~~v~~~~~s~~~~~l~s~-~~dg~------v~vwd~~~~  486 (537)
                           ...|.+++|++++.++++. ..||.      +++|++.+.
T Consensus       235 ~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          235 YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence                 2379999999998877653 34433      899999764

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.82  E-value=1.9e-19  Score=186.05  Aligned_cols=299  Identities=9%  Similarity=0.025  Sum_probs=186.4

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-----hhcccCCCccEEEeeecc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-----IALLGEEDSHIVVASNEY  172 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~~~~~~~  172 (537)
                      ...+++|+|||++|+++  |++|++||+.+           ++....+.+|......     ++|| ||+++|++++.+.
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~S-pdg~~l~~~~~~~   83 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEY-----------GNSSVFLENSTFDEFGHSINDYSIS-PDGQFILLEYNYV   83 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTT-----------CCEEEEECTTTTTTCCSCCCEEEEC-TTSSEEEEEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCC-----------CceEEEEechhhhhhcccccceEEC-CCCCEEEEEECCe
Confidence            46689999999999886  89999999999           5666677777654433     4669 7889998888764


Q ss_pred             cc-----CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        173 LN-----GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       173 ~~-----~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      ..     .+.+                 .+||+       .+++.. +.     .|  ...+...   +|||||+.||.+
T Consensus        84 ~~~r~~~~~~~-----------------~~~d~-------~~~~~~~l~-----~~--~~~~~~~---~~SPdG~~la~~  129 (740)
T 4a5s_A           84 KQWRHSYTASY-----------------DIYDL-------NKRQLITEE-----RI--PNNTQWV---TWSPVGHKLAYV  129 (740)
T ss_dssp             ECSSSCEEEEE-----------------EEEET-------TTTEECCSS-----CC--CTTEEEE---EECSSTTCEEEE
T ss_pred             eeEEEccceEE-----------------EEEEC-------CCCcEEEcc-----cC--CCcceee---EECCCCCEEEEE
Confidence            30     0224                 68999       888776 77     77  7889999   999999999988


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      . ++.|.  +|+...+.....        +..++.             +  .+++-...-      ... ...-+....+
T Consensus       130 ~-~~~i~--~~~~~~~~~~~l--------t~~g~~-------------~--~~~~g~~~~------v~~-ee~~~~~~~~  176 (740)
T 4a5s_A          130 W-NNDIY--VKIEPNLPSYRI--------TWTGKE-------------D--IIYNGITDW------VYE-EEVFSAYSAL  176 (740)
T ss_dssp             E-TTEEE--EESSTTSCCEEC--------CSCCBT-------------T--TEEESBCCH------HHH-HHTSSSSBCE
T ss_pred             E-CCeEE--EEECCCCceEEE--------cCCCCc-------------c--ceecCcccc------ccc-chhcCCCcce
Confidence            4 67899  999876421100        000000             0  000000000      000 0001223568


Q ss_pred             EEcCCCCEEEEEeCCCc-EEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCC---Ce--eeeeecc-
Q psy10942        327 TVSPNDKLLASGSLDKT-VKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT---ST--CVSTFDK-  393 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~-i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~--~~~~~~~-  393 (537)
                      .|||||+.|+.++.|.. +.+|++...      ......+.....|..    ....++++||+.+   ++  ....+.. 
T Consensus       177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~  252 (740)
T 4a5s_A          177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAP  252 (740)
T ss_dssp             EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred             EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCC
Confidence            99999999998875544 888877411      122233333333221    1123688999998   73  1222221 


Q ss_pred             -----CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC----CCcEEEEECCCce----ee--eEe--ecCCcc
Q psy10942        394 -----HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG----DATIKLWCLTDYV----CL--KSL--EGHDAS  456 (537)
Q Consensus       394 -----~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~  456 (537)
                           +..                 .+..++|+|||+.++....    +..|.+||+.+++    +.  ..+  ..|...
T Consensus       253 ~~~~~~~~-----------------~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~  315 (740)
T 4a5s_A          253 ASMLIGDH-----------------YLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW  315 (740)
T ss_dssp             HHHHTSCE-----------------EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred             ccCCCCCe-----------------EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence                 322                 5677888888886665433    3379999998876    22  222  456655


Q ss_pred             eE-----EEEEecCCCEEE-EEeC-C--CcEEEEECCCCeeEEEecCCccce
Q psy10942        457 VL-----RCHFINKGTQIV-STGA-D--GLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       457 v~-----~~~~s~~~~~l~-s~~~-d--g~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      |.     .+.|+|||+.|+ ..+. +  ..|++||+.+++... +......+
T Consensus       316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v  366 (740)
T 4a5s_A          316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEV  366 (740)
T ss_dssp             SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCE
T ss_pred             EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEE
Confidence            54     789999999887 6654 3  358889987766543 33333334

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.82  E-value=2.1e-18  Score=162.72  Aligned_cols=248  Identities=8%  Similarity=0.065  Sum_probs=154.5

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCC----CcceeccccccCCCcccccccc-----cccceeeeeeCCcceEEEEEeCCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSME----PSTLEELEKRKTYHFPLFGIFV-----PEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d----~~i~~~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                      ...+..+   +|+|+|++|++++.+    +.+.  +|++............     .....+..  ... .++++...++
T Consensus        49 ~~~p~~l---~~spdg~~l~~~~~~~~~~~~v~--~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~  120 (361)
T 3scy_A           49 VANPSYL---IPSADGKFVYSVNEFSKDQAAVS--AFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGG  120 (361)
T ss_dssp             CSCCCSE---EECTTSSEEEEEECCSSTTCEEE--EEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTT
T ss_pred             CCCCceE---EECCCCCEEEEEEccCCCCCcEE--EEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCC
Confidence            5667778   999999999988875    7898  9998764221111000     00011111  111 2444445789


Q ss_pred             eEEEEECCCCceeeeeecc-c--------ccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCce----e-eEEEE
Q psy10942        296 TVKVWSTTGGLKLLNVLRG-H--------KKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLK----L-LNVLR  360 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~-~--------~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~----~-~~~~~  360 (537)
                      .|.+|++.....+...... .        ...+...+.+++|+|+|+++++++ .++.|.+|++.....    . +....
T Consensus       121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~  200 (361)
T 3scy_A          121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG  200 (361)
T ss_dssp             EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred             EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence            9999999754432211000 0        111233468899999999776655 478899998873221    0 11000


Q ss_pred             ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEE
Q psy10942        361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLW  439 (537)
Q Consensus       361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~  439 (537)
                      .               ....         ......                  ....++|+|||+++++++ .++.|.+|
T Consensus       201 ~---------------~~~~---------~~~~~~------------------~~~~~~~spdg~~l~v~~~~~~~v~v~  238 (361)
T 3scy_A          201 T---------------PEAF---------KVAPGS------------------GPRHLIFNSDGKFAYLINEIGGTVIAF  238 (361)
T ss_dssp             E---------------EEEE---------ECCTTC------------------CEEEEEECTTSSEEEEEETTTCEEEEE
T ss_pred             c---------------ccce---------ecCCCC------------------CCeEEEEcCCCCEEEEEcCCCCeEEEE
Confidence            0               0000         000000                  567799999999888777 58999999


Q ss_pred             ECCCcee--eeEee---cCCcceEEEEEecCCCEEEEEeCC--CcEEEEECC--CCe--eEEEecCCccceeccCCCCCC
Q psy10942        440 CLTDYVC--LKSLE---GHDASVLRCHFINKGTQIVSTGAD--GLLKLWSIK--TST--CVSTFDKHALKIRNSDSENDH  508 (537)
Q Consensus       440 d~~~~~~--~~~~~---~~~~~v~~~~~s~~~~~l~s~~~d--g~v~vwd~~--~~~--~~~~~~~~~~~i~~~~~~~~~  508 (537)
                      ++.+++.  +..+.   .+......++|+|||++|+++..+  +.|.+|++.  +++  .+..+.. ...+         
T Consensus       239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~---------  308 (361)
T 3scy_A          239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP---------  308 (361)
T ss_dssp             EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC---------
T ss_pred             EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC---------
Confidence            9987654  33332   233456899999999999776654  889999985  454  3334433 3344         


Q ss_pred             ccccccceeeecCCCEEEEEe-CCCCEEeC
Q psy10942        509 KGFGLPRQLCSRNSDCEYRGG-WSPQVVVY  537 (537)
Q Consensus       509 ~~~~~~~~~~s~~~~~l~s~~-~dg~i~vW  537 (537)
                        ..+   +|+|||++|++++ .++.|.+|
T Consensus       309 --~~~---~~spdg~~l~~~~~~~~~v~v~  333 (361)
T 3scy_A          309 --RNF---IITPNGKYLLVACRDTNVIQIF  333 (361)
T ss_dssp             --CEE---EECTTSCEEEEEETTTTEEEEE
T ss_pred             --ceE---EECCCCCEEEEEECCCCCEEEE
Confidence              677   9999999998887 57888875

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.82  E-value=2.6e-18  Score=162.07  Aligned_cols=297  Identities=10%  Similarity=0.054  Sum_probs=177.2

Q ss_pred             cEEEEEe----CccceEEeeecc--ceeh--hhhcCCCcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccc
Q psy10942         67 KTFVLAG----GEKSLLHYYETS--AVKE--LYQHGLSSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEER  134 (537)
Q Consensus        67 ~~~~~~~----~~~~~i~~wd~~--~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~  134 (537)
                      ..+++++    +.++.|.+|++.  +++.  +... ....+..++|+|||++|++++.+    +.|.+|+++.....   
T Consensus        13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~---   88 (361)
T 3scy_A           13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT---   88 (361)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE---
T ss_pred             ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc---
Confidence            3455555    346679999764  4433  3333 34578889999999999998885    79999998762110   


Q ss_pred             cccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-
Q psy10942        135 PNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-  213 (537)
Q Consensus       135 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-  213 (537)
                          .+.+.....+......+++   ++++|+++... +  +.+                 .+|++       ...... 
T Consensus        89 ----~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~-~--~~v-----------------~~~~~-------~~~g~~~  134 (361)
T 3scy_A           89 ----LHLLNTQKTMGADPCYLTT---NGKNIVTANYS-G--GSI-----------------TVFPI-------GQDGALL  134 (361)
T ss_dssp             ----EEEEEEEECSSSCEEEEEE---CSSEEEEEETT-T--TEE-----------------EEEEB-------CTTSCBC
T ss_pred             ----EEEeeEeccCCCCcEEEEE---CCCEEEEEECC-C--CEE-----------------EEEEe-------CCCCcCc
Confidence                2333334434444555555   46666665432 2  337                 77776       322211 


Q ss_pred             -cc-ccc--------cccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccceeeeeeC
Q psy10942        214 -KH-NTE--------RLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG  282 (537)
Q Consensus       214 -l~-~~~--------~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~  282 (537)
                       +. ...        ...+  ...+.++   +|+|+|++++++ ..++.+.  +|++.........      ..+...  
T Consensus       135 ~~~~~~~~~g~~~~~~~~~--~~~~~~~---~~spdg~~l~~~~~~~~~v~--v~~~~~~~~~~~~------~~l~~~--  199 (361)
T 3scy_A          135 PASDVIEFKGSGPDKERQT--MPHLHCV---RITPDGKYLLADDLGTDQIH--KFNINPNANADNK------EKFLTK--  199 (361)
T ss_dssp             SCSEEEECCCCCSCTTTCS--SCCEEEE---EECTTSSEEEEEETTTTEEE--EEEECTTCCTTTC------CCCEEE--
T ss_pred             ccceeEEccCCCCCccccC--CCcceEE---EECCCCCEEEEEeCCCCEEE--EEEEcCCCCcccc------cceeec--
Confidence             10 000        0012  3346788   999999866554 4467788  8877653210000      000000  


Q ss_pred             CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeE--EE
Q psy10942        283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLN--VL  359 (537)
Q Consensus       283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~--~~  359 (537)
                                  +......               ..+...+..++|+|||+++++++ .++.|.+|++. ......  .+
T Consensus       200 ------------~~~~~~~---------------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~~~~~~~  251 (361)
T 3scy_A          200 ------------GTPEAFK---------------VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA-DGMLDEIQTV  251 (361)
T ss_dssp             ------------EEEEEEE---------------CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE-TTEEEEEEEE
T ss_pred             ------------cccccee---------------cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec-CCceEEeEEE
Confidence                        0000001               11234467899999999888777 68999999987 433211  11


Q ss_pred             EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEE
Q psy10942        360 RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIK  437 (537)
Q Consensus       360 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~  437 (537)
                      ...+.                             +..                 ....++|+|||++|+++..+  +.|.
T Consensus       252 ~~~~~-----------------------------~~~-----------------~~~~i~~spdg~~l~v~~~~~~~~i~  285 (361)
T 3scy_A          252 AADTV-----------------------------NAQ-----------------GSGDIHLSPDGKYLYASNRLKADGVA  285 (361)
T ss_dssp             ESCSS-----------------------------CCC-----------------CEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred             ecCCC-----------------------------CCC-----------------CcccEEECCCCCEEEEECCCCCCEEE
Confidence            11110                             000                 45688999999998776654  8999


Q ss_pred             EEECC--Cce--eeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCeeEEE
Q psy10942        438 LWCLT--DYV--CLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLW--SIKTSTCVST  491 (537)
Q Consensus       438 i~d~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vw--d~~~~~~~~~  491 (537)
                      +|++.  +++  .+..+.. ...+..++|+|+|++|++++ .++.|.+|  |..++++...
T Consensus       286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~  345 (361)
T 3scy_A          286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI  345 (361)
T ss_dssp             EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred             EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence            99985  344  4445554 45688999999999998887 57889996  5556765543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.81  E-value=2.9e-18  Score=160.83  Aligned_cols=299  Identities=11%  Similarity=0.025  Sum_probs=193.7

Q ss_pred             ccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC----------CceEEEEecccccCcccccccccceeEE
Q psy10942         75 EKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA----------DHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      .++.|.+||..+++.+.++.....- .++|+|||++|+++..          ++.|.+||..+           .+.+.+
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-----------~~~~~~   96 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-----------LTFEKE   96 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-----------CCEEEE
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC-----------CcEEEE
Confidence            3679999999999888777665444 9999999999998863          67899999988           666766


Q ss_pred             eecc------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-c-cc
Q psy10942        145 FVGF------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-K-HN  216 (537)
Q Consensus       145 ~~~~------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l-~~  216 (537)
                      +...      ......++|+ +++++|+++.....  +.|                 .+||+       .+.+.. . - 
T Consensus        97 i~~~~~~~~~g~~p~~i~~s-pdg~~l~v~n~~~~--~~v-----------------~v~d~-------~~~~~~~~~i-  148 (361)
T 2oiz_A           97 ISLPPKRVQGLNYDGLFRQT-TDGKFIVLQNASPA--TSI-----------------GIVDV-------AKGDYVEDVT-  148 (361)
T ss_dssp             EEECTTBCCBCCCGGGEEEC-TTSSEEEEEEESSS--EEE-----------------EEEET-------TTTEEEEEEG-
T ss_pred             EEcCccccccCCCcceEEEC-CCCCEEEEECCCCC--CeE-----------------EEEEC-------CCCcEEEEEe-
Confidence            6542      2457889999 78888887764322  238                 88888       655443 1 1 


Q ss_pred             cccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                          ..  ... ..+   .+.|++ ..+++.+.||.+.  +|+.......                      .....   
T Consensus       149 ----~~--~~~-~~v---~~~p~~~~~~~~~~~dg~~~--~v~~~~~g~~----------------------~~~~~---  191 (361)
T 2oiz_A          149 ----AA--AGC-WSV---IPQPNRPRSFMTICGDGGLL--TINLGEDGKV----------------------ASQSR---  191 (361)
T ss_dssp             ----GG--TTE-EEE---EECTTSSSEEEEEETTSSEE--EEEECTTSSE----------------------EEEEE---
T ss_pred             ----cC--CCc-cee---EEcCCCCeeEEEECCCCcEE--EEEECCCCcE----------------------eeecc---
Confidence                12  111 123   345654 5667777788877  7766441100                      00000   


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCCEEEEEcCC
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d  374 (537)
                      ...+|+...                .++ .+.++|++..++..+.++.+.++|+...... ...                
T Consensus       192 ~~~~~~~~~----------------~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~----------------  238 (361)
T 2oiz_A          192 SKQMFSVKD----------------DPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGP----------------  238 (361)
T ss_dssp             CCCCSCTTT----------------SCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEE----------------
T ss_pred             ccceEcCCC----------------Cce-EEEecccCCEEEEEeCCCeEEEEEecCCCceeccc----------------
Confidence            001122111                111 2223567777777778888998888622111 111                


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-----------CCcEEEEECCC
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-----------DATIKLWCLTD  443 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~i~d~~~  443 (537)
                           |++......           ...+.|.       +...++|+|+++.++++..           .+.|.+||+.+
T Consensus       239 -----~~~~~~~~~-----------~~~~~p~-------g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t  295 (361)
T 2oiz_A          239 -----WSLLNDEDK-----------AKNWVPG-------GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT  295 (361)
T ss_dssp             -----EESCCHHHH-----------HTTCEEC-------CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred             -----ccccCcccc-----------ccccccC-------CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence                 111100000           0000111       2223678888877776643           34899999999


Q ss_pred             ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC--eeEEEecCCccceeccCCCCCCccccccceeeecC
Q psy10942        444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS--TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN  521 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~  521 (537)
                      ++.+.++..+.  +.+++|+|||++|++++. +.|.+||..++  +.+..+..+....           ..+   +++|+
T Consensus       296 ~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P-----------~~~---~~~p~  358 (361)
T 2oiz_A          296 KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEAS-----------LQV---QFHPV  358 (361)
T ss_dssp             TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSE-----------EEE---EECCC
T ss_pred             CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCc-----------EEE---EecCC
Confidence            99999999876  899999999999998887 99999999999  9998876555555           677   99999


Q ss_pred             CC
Q psy10942        522 SD  523 (537)
Q Consensus       522 ~~  523 (537)
                      |+
T Consensus       359 G~  360 (361)
T 2oiz_A          359 GG  360 (361)
T ss_dssp             SC
T ss_pred             CC
Confidence            86

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.79  E-value=4.8e-18  Score=159.30  Aligned_cols=104  Identities=7%  Similarity=0.008  Sum_probs=80.8

Q ss_pred             cCCcceEEEec------CcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------cc
Q psy10942         13 QITSEFSVHCG------RDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------EK   76 (537)
Q Consensus        13 ~~~~~~l~s~~------~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~   76 (537)
                      .+++++++...      .|+.|.+||.++++.+..++..... .+  .++|        ++++++++.          .+
T Consensus        12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i--~~sp--------dg~~lyv~~~~~~~~~~g~~~   80 (361)
T 2oiz_A           12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HV--QVSN--------DGKKIYTMTTYHERITRGKRS   80 (361)
T ss_dssp             SCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EE--EECT--------TSSEEEEEEEEETTSSSSCEE
T ss_pred             CCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ce--EECC--------CCCEEEEEEecccccccCCCC
Confidence            36777777753      3679999999999999888854433 44  6788        667777765          36


Q ss_pred             ceEEeeeccceehhhhcCCC-------cceEEEEEeccccEEEEEeC--CceEEEEeccc
Q psy10942         77 SLLHYYETSAVKELYQHGLS-------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNS  127 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~  127 (537)
                      +.|.+||+.+++.+.++...       .....++|+|||++|+++..  ++.|.+||+.+
T Consensus        81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~  140 (361)
T 2oiz_A           81 DVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK  140 (361)
T ss_dssp             EEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred             CEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence            78999999988887666532       35678999999999998874  58999999998

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.79  E-value=3.3e-17  Score=154.51  Aligned_cols=284  Identities=9%  Similarity=-0.023  Sum_probs=168.0

Q ss_pred             ceEEeeec--cceeh--hhhc--CCCcceEEEEEeccccEEEEEeCCceEEEEecc-cccCcccccccccceeEEeecc-
Q psy10942         77 SLLHYYET--SAVKE--LYQH--GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN-SETGLEERPNKILKFRKQFVGF-  148 (537)
Q Consensus        77 ~~i~~wd~--~~~~~--~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~-  148 (537)
                      +.|.+|++  .+++.  +...  .....+..++|+|||++|++++.+ .|.+|++. +           +++....... 
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~-----------g~~~~~~~~~~   81 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSP-----------TEIVHEASHPI   81 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEET-----------TEEEEEEEEEC
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCC-----------CCEEEeeEeec
Confidence            45777765  44543  2222  122468899999999999998887 89999997 5           3333222211 


Q ss_pred             hhhhhhhhcccCCCccE--EEee-------ec----cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc-
Q psy10942        149 SDEILDIALLGEEDSHI--VVAS-------NE----YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ-  213 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l--~~~~-------~~----~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~-  213 (537)
                      .+.+..++|+ |+++++  +++.       ..    .+  +.+                 .+|++       .. ++.. 
T Consensus        82 ~g~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~~--g~v-----------------~v~~~-------~~~g~~~~  134 (365)
T 1jof_A           82 GGHPRANDAD-TNTRAIFLLAAKQPPYAVYANPFYKFA--GYG-----------------NVFSV-------SETGKLEK  134 (365)
T ss_dssp             CSSGGGGCTT-SCCEEEEEEECSSTTCCEEEEEESSSC--CEE-----------------EEEEE-------CTTCCEEE
T ss_pred             CCCCccEEEC-CCCCEEEEEEecCCcceeccceeecCC--ceE-----------------EEEcc-------CCCCcCcc
Confidence            1236779999 677753  3332       10    12  447                 77877       42 2221 


Q ss_pred             -ccccccccCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEE
Q psy10942        214 -KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASG  291 (537)
Q Consensus       214 -l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~  291 (537)
                       +... ...+  ...+.++   +|+|||++++++. .++.|.  +|++..                              
T Consensus       135 ~~~~~-~~~~--~~~~~~~---~~spdG~~l~~~~~~~~~v~--~~~~~~------------------------------  176 (365)
T 1jof_A          135 NVQNY-EYQE--NTGIHGM---VFDPTETYLYSADLTANKLW--THRKLA------------------------------  176 (365)
T ss_dssp             EEEEE-ECCT--TCCEEEE---EECTTSSEEEEEETTTTEEE--EEEECT------------------------------
T ss_pred             eEeeE-EeCC--CCcceEE---EECCCCCEEEEEcCCCCEEE--EEEECC------------------------------
Confidence             1100 0024  5678899   9999999887654 345666  776651                              


Q ss_pred             eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccC-Cceee---EEEEecCCCC
Q psy10942        292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTG-GLKLL---NVLRGHKKGT  366 (537)
Q Consensus       292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~-~~~~~---~~~~~~~~~~  366 (537)
                                  +++..... ......|...+..++|+|||+++++++. ++.|.+|++.. .++..   ..+...+.+ 
T Consensus       177 ------------~g~~~~~~-~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~-  242 (365)
T 1jof_A          177 ------------SGEVELVG-SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG-  242 (365)
T ss_dssp             ------------TSCEEEEE-EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT-
T ss_pred             ------------CCCEEEee-eEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC-
Confidence                        11100000 0000113456889999999999988775 68899998752 12221   111111100 


Q ss_pred             EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE-EcCCCCEEEEEeCC-C-----cEEEE
Q psy10942        367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN-FSPLDRILISSSGD-A-----TIKLW  439 (537)
Q Consensus       367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~d-g-----~i~i~  439 (537)
                                              +.++..+..     +      ...+..++ |+|||++|+++..+ +     .|.+|
T Consensus       243 ------------------------~~g~~~~~~-----~------~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~  287 (365)
T 1jof_A          243 ------------------------IPDRDPETG-----K------GLYRADVCALTFSGKYMFASSRANKFELQGYIAGF  287 (365)
T ss_dssp             ------------------------CCCBCTTTS-----S------BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEE
T ss_pred             ------------------------cCCcccccc-----c------ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEE
Confidence                                    000000000     0      00366788 99999988877643 2     89999


Q ss_pred             ECC-Cceeee---EeecCCcceEEEEEec---CCCEEEEEeCC-CcEEEEECCCC
Q psy10942        440 CLT-DYVCLK---SLEGHDASVLRCHFIN---KGTQIVSTGAD-GLLKLWSIKTS  486 (537)
Q Consensus       440 d~~-~~~~~~---~~~~~~~~v~~~~~s~---~~~~l~s~~~d-g~v~vwd~~~~  486 (537)
                      ++. +++...   ....+...+..++|+|   ||++|++++.+ +.|.+|+++..
T Consensus       288 ~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          288 KLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             EECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            986 565443   2333555677899999   89999999875 89999998765

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.79  E-value=4.8e-17  Score=153.41  Aligned_cols=158  Identities=9%  Similarity=0.064  Sum_probs=107.6

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceee--EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        319 HEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLL--NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~--~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      +...+.+++|+|||++|+++.. ++.|++|++...++..  ..+...                              .+.
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~------------------------------~~g  192 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP------------------------------DPG  192 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS------------------------------STT
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC------------------------------CCC
Confidence            4467899999999998887764 6789999986211111  111100                              000


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECC--Cceee---eEee-------cCCc------c
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLT--DYVCL---KSLE-------GHDA------S  456 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~-------~~~~------~  456 (537)
                      .                 .+..++|+|||+++++++. ++.|.+|++.  +++..   ..+.       +|..      .
T Consensus       193 ~-----------------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~  255 (365)
T 1jof_A          193 D-----------------HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLY  255 (365)
T ss_dssp             C-----------------CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSE
T ss_pred             C-----------------CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccc
Confidence            0                 6778999999999988775 6899999765  45432   1222       1222      4


Q ss_pred             eEEEE-EecCCCEEEEEeCCC------cEEEEECC-CCeeEEE---ecCCccceeccCCCCCCccccccceeeec---CC
Q psy10942        457 VLRCH-FINKGTQIVSTGADG------LLKLWSIK-TSTCVST---FDKHALKIRNSDSENDHKGFGLPRQLCSR---NS  522 (537)
Q Consensus       457 v~~~~-~s~~~~~l~s~~~dg------~v~vwd~~-~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~s~---~~  522 (537)
                      +..++ |+|||++|+++..+.      .|.+|++. ++++...   ...+....           ..+   +|+|   ||
T Consensus       256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~-----------~~~---a~sp~~~dg  321 (365)
T 1jof_A          256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG-----------HSN---AVSPCPWSD  321 (365)
T ss_dssp             EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT-----------TCC---CEEECTTCT
T ss_pred             cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc-----------ccc---eecCCCcCC
Confidence            78999 999999988776432      89999996 5665432   33344445           677   9999   89


Q ss_pred             CEEEEEeCC-CCEEeC
Q psy10942        523 DCEYRGGWS-PQVVVY  537 (537)
Q Consensus       523 ~~l~s~~~d-g~i~vW  537 (537)
                      ++|++++.+ +.|++|
T Consensus       322 ~~l~v~~~~~~~v~v~  337 (365)
T 1jof_A          322 EWMAITDDQEGWLEIY  337 (365)
T ss_dssp             TEEEEECSSSCEEEEE
T ss_pred             CEEEEEEcCCCeEEEE
Confidence            999999864 889887

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.78  E-value=1.6e-16  Score=156.32  Aligned_cols=329  Identities=12%  Similarity=0.071  Sum_probs=209.2

Q ss_pred             CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc--ceehhh
Q psy10942         14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS--AVKELY   91 (537)
Q Consensus        14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~--~~~~~~   91 (537)
                      +++.++++...++.|.++|.++++.+.+++.......+  .++|        +++++++++.++.|.+||+.  +++.+.
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v--~~Sp--------DGr~lyv~~~dg~V~viD~~~~t~~~v~  234 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS--RLSA--------SGRYLFVIGRDGKVNMIDLWMKEPTTVA  234 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccce--EECC--------CCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence            44567777788999999999999999999877666666  6688        77888888889999999995  888887


Q ss_pred             hcCCCcceEEEEEe----ccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecch----------h-hhhhh
Q psy10942         92 QHGLSSPLVRIVRS----SVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFS----------D-EILDI  155 (537)
Q Consensus        92 ~~~~~~~v~~~~~s----~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~v~~~  155 (537)
                      ++........++||    |||++++++.. +++|.++|..+           .+.++.+....          . .+..+
T Consensus       235 ~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-----------~~~~~~i~~~~~~~~~~~~~p~~rva~i  303 (567)
T 1qks_A          235 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-----------LEPKKIQSTRGMTYDEQEYHPEPRVAAI  303 (567)
T ss_dssp             EEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-----------CCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred             EEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC-----------CcEEEEEeccccccccccccCCCceEEE
Confidence            77766678899999    79999888775 58999999888           66666655321          1 34556


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEecc
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERG  234 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~  234 (537)
                      .++ +++..+++.. ...  |.|                 .++|.       ...... ..  . ...  ......+   
T Consensus       304 ~~s-~~~~~~vv~~-~~~--g~v-----------------~~vd~-------~~~~~~~v~--~-i~~--~~~~~d~---  347 (567)
T 1qks_A          304 LAS-HYRPEFIVNV-KET--GKI-----------------LLVDY-------TDLNNLKTT--E-ISA--ERFLHDG---  347 (567)
T ss_dssp             EEC-SSSSEEEEEE-TTT--TEE-----------------EEEET-------TCSSEEEEE--E-EEC--CSSEEEE---
T ss_pred             EEc-CCCCEEEEEe-cCC--CeE-----------------EEEec-------CCCccceee--e-eec--cccccCc---
Confidence            666 3333333322 222  335                 55554       222111 11  0 012  2345566   


Q ss_pred             CcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        235 KTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       235 ~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                      .|+|+|++++++. .++.|.  ++|..                                           +++....+..
T Consensus       348 ~~~pdgr~~~va~~~sn~V~--ViD~~-------------------------------------------t~kl~~~i~v  382 (567)
T 1qks_A          348 GLDGSHRYFITAANARNKLV--VIDTK-------------------------------------------EGKLVAIEDT  382 (567)
T ss_dssp             EECTTSCEEEEEEGGGTEEE--EEETT-------------------------------------------TTEEEEEEEC
T ss_pred             eECCCCCEEEEEeCCCCeEE--EEECC-------------------------------------------CCcEEEEEec
Confidence            7888888776543 334444  44444                                           4432222111


Q ss_pred             ccccccCCCeEEEEEcCCCCEE-EEEe-CCCcEEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLL-ASGS-LDKTVKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l-~~~~-~d~~i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      .....|.+.-..+ ++|++..+ +++. .++.|.++|....      .+.+..+.....                     
T Consensus       383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~---------------------  440 (567)
T 1qks_A          383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG---------------------  440 (567)
T ss_dssp             SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS---------------------
T ss_pred             cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC---------------------
Confidence            0112343322222 57875444 4443 4678999998731      223333332211                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-------CCcEEEEECCCc-----eee-eEee-
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-------DATIKLWCLTDY-----VCL-KSLE-  451 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~i~i~d~~~~-----~~~-~~~~-  451 (537)
                                                  +-..+..+|+++++.+...       .+.|.++|+.+.     ... ..+. 
T Consensus       441 ----------------------------g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~  492 (567)
T 1qks_A          441 ----------------------------GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPI  492 (567)
T ss_dssp             ----------------------------CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECH
T ss_pred             ----------------------------CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecc
Confidence                                        2234667899998888663       358999999876     211 2222 


Q ss_pred             -------cCCcceEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEEecC
Q psy10942        452 -------GHDASVLRCHFINKGTQIVSTG-----ADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       452 -------~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~~~~~~~~~~~~  494 (537)
                             .....+..+.|+|+|+++..+.     .++.|.|+|.++++++..++.
T Consensus       493 ~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  547 (567)
T 1qks_A          493 AEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  547 (567)
T ss_dssp             HHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             ccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence                   1234688999999999887663     378999999999999988864

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.77  E-value=5.8e-18  Score=161.95  Aligned_cols=320  Identities=10%  Similarity=-0.031  Sum_probs=185.7

Q ss_pred             EeeeccceehhhhcCCCc------ceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecchh
Q psy10942         80 HYYETSAVKELYQHGLSS------PLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGFSD  150 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~~------~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (537)
                      ...|..+++.+..+..+.      .+..++|||||++|+.....   ..|.+||+.+           ++.. .+..+..
T Consensus        13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-----------~~~~-~l~~~~~   80 (396)
T 3c5m_A           13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-----------QQAV-QLTEGKG   80 (396)
T ss_dssp             EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------TEEE-ECCCSSC
T ss_pred             eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCC-----------CcEE-EeecCCC
Confidence            344667776665555432      26778999999998887653   3688888887           3433 3333333


Q ss_pred             h-hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeE
Q psy10942        151 E-ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTV  228 (537)
Q Consensus       151 ~-v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v  228 (537)
                      . ...+.|+ |+++.|+++..+..    +                 .+||+       .+++.. +.    ..+  .   
T Consensus        81 ~~~~~~~~s-pdg~~l~~~~~~~~----l-----------------~~~d~-------~~~~~~~~~----~~~--~---  122 (396)
T 3c5m_A           81 DNTFGGFIS-TDERAFFYVKNELN----L-----------------MKVDL-------ETLEEQVIY----TVD--E---  122 (396)
T ss_dssp             BCTTTCEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEE----ECC--T---
T ss_pred             CccccceEC-CCCCEEEEEEcCCc----E-----------------EEEEC-------CCCCcEEEE----ecc--c---
Confidence            3 3447899 78888888776665    8                 88888       655544 22    022  1   


Q ss_pred             EEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE-----EeCCCeEEEEECC
Q psy10942        229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS-----GSLDKTVKVWSTT  303 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-----~~~d~~i~i~~~~  303 (537)
                            .|+++|+.|+....+....  +|.....       ..+         ..  +.++.     ...+..|.+||+.
T Consensus       123 ------~~~~~g~~l~~~~~~~~~~--~~~~~~~-------~sp---------dg--~~~~~~~~~~~~~~~~l~~~d~~  176 (396)
T 3c5m_A          123 ------EWKGYGTWVANSDCTKLVG--IEILKRD-------WQP---------LT--SWEKFAEFYHTNPTCRLIKVDIE  176 (396)
T ss_dssp             ------TEEEEEEEEECTTSSEEEE--EEEEGGG-------CCC---------CC--SHHHHHHHHHTCCCEEEEEEETT
T ss_pred             ------ccCCCCCEEEeccCCcccc--ccccccc-------cCC---------CC--cceeeeeeccCCCcceEEEEECC
Confidence                  3456677777666655554  4432110       000         00  00000     0234678899998


Q ss_pred             CCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCC------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942        304 GGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDK------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL  376 (537)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~  376 (537)
                      +++...      +..+...+..+.|+| +++.|+..+.++      .|.+||+.                          
T Consensus       177 ~g~~~~------~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~--------------------------  224 (396)
T 3c5m_A          177 TGELEV------IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED--------------------------  224 (396)
T ss_dssp             TCCEEE------EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT--------------------------
T ss_pred             CCcEEe------eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC--------------------------
Confidence            876421      224566789999999 788777765432      34444443                          


Q ss_pred             EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeEee
Q psy10942        377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~  451 (537)
                             .++..........                ..+..++|+|||++|+.++.+     +.|++||+.+++......
T Consensus       225 -------~~~~~~l~~~~~~----------------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~  281 (396)
T 3c5m_A          225 -------GSNVRKIKEHAEG----------------ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV  281 (396)
T ss_dssp             -------SCCCEESSCCCTT----------------EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred             -------CCceeEeeccCCC----------------ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence                   2221111110000                046678899999877776543     449999998876543332


Q ss_pred             cCCcceEEEEEec-CCCEEEEEe----------------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942        452 GHDASVLRCHFIN-KGTQIVSTG----------------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP  514 (537)
Q Consensus       452 ~~~~~v~~~~~s~-~~~~l~s~~----------------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  514 (537)
                       ... .. +.|+| ||+++++++                .+..|++||+.+++.. .+..+...+.............+ 
T Consensus       282 -~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-  356 (396)
T 3c5m_A          282 -MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHP-  356 (396)
T ss_dssp             -CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCC-
T ss_pred             -CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCc-
Confidence             112 33 89999 999888765                2468999999887653 44444331000000000000556 


Q ss_pred             ceeeecCCCEEEEEeC-CCCEEeC
Q psy10942        515 RQLCSRNSDCEYRGGW-SPQVVVY  537 (537)
Q Consensus       515 ~~~~s~~~~~l~s~~~-dg~i~vW  537 (537)
                        +|+|||+.|+.++. ++...||
T Consensus       357 --~~s~dg~~l~~~s~~~~~~~l~  378 (396)
T 3c5m_A          357 --SFTPNDDGVLFTSDFEGVPAIY  378 (396)
T ss_dssp             --EECTTSSEEEEEECTTSSCEEE
T ss_pred             --eEccCCCeEEEEecCCCCceEE
Confidence              99999998887664 5555554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.77  E-value=3.4e-18  Score=163.07  Aligned_cols=310  Identities=10%  Similarity=-0.037  Sum_probs=180.7

Q ss_pred             EEEEcCccceeeeeccccc-ccee---eeEeecCccccccCCcEEEEEeCc-cc--eEEeeeccceehhhhcCCCc-ceE
Q psy10942         29 FTWDLSSRKQLRSYPAYES-LETC---AVFHLSDETESKSGGKTFVLAGGE-KS--LLHYYETSAVKELYQHGLSS-PLV  100 (537)
Q Consensus        29 ~iwd~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~~wd~~~~~~~~~~~~~~-~v~  100 (537)
                      ..+|..++..+..+..... ....   ...++|        ++++|+..+. ++  .|.+||+.+++.......+. .+.
T Consensus        13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~Sp--------Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~   84 (388)
T 3pe7_A           13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTR--------DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF   84 (388)
T ss_dssp             EEECTTTCCEEEECSCTTSCEECCCTTSCCBCT--------TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS
T ss_pred             EEecCCCCcceEEecCCcccccchhhcCccCCC--------CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc
Confidence            3457778877776653322 1110   014567        5566666554 56  48888999988776666554 344


Q ss_pred             EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc--ccCCCccEEEeeeccc-----
Q psy10942        101 RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL--LGEEDSHIVVASNEYL-----  173 (537)
Q Consensus       101 ~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~~~~-----  173 (537)
                      .++|||||+.|+.++.++.|++||+.+           ++.......+...+....|  + +++..++.......     
T Consensus        85 ~~~~spdg~~l~~~~~~~~l~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~  152 (388)
T 3pe7_A           85 GGFLSPDDDALFYVKDGRNLMRVDLAT-----------LEENVVYQVPAEWVGYGTWVAN-SDCTKLVGIEIRREDWVPL  152 (388)
T ss_dssp             SCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEEC-TTSSEEEEEEEEGGGCCCC
T ss_pred             ceEEcCCCCEEEEEeCCCeEEEEECCC-----------CcceeeeechhhcccccceeEC-CCCCeeccccccCcccccc
Confidence            678999999999999999999999998           4555455555444433333  5 56666653321111     


Q ss_pred             -------------cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc-
Q psy10942        174 -------------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK-  238 (537)
Q Consensus       174 -------------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~-  238 (537)
                                   ....|                 .+||+       .+++.. +.     .+  ...+..+   +|+| 
T Consensus       153 ~~~~~~~~~~~~~~~~~l-----------------~~~d~-------~~g~~~~l~-----~~--~~~~~~~---~~sp~  198 (388)
T 3pe7_A          153 TDWKKFHEFYFTKPCCRL-----------------MRVDL-------KTGESTVIL-----QE--NQWLGHP---IYRPY  198 (388)
T ss_dssp             CSHHHHHHHGGGCCCEEE-----------------EEEET-------TTCCEEEEE-----EE--SSCEEEE---EEETT
T ss_pred             cccchhhhhhccCCcceE-----------------EEEEC-------CCCceEEee-----cC--Ccccccc---EECCC
Confidence                         00113                 45555       555444 44     55  6678888   8999 


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ||+.|+....++      ++..                                 ...|.+++..++..      ..+..
T Consensus       199 dg~~l~~~~~~~------~~~~---------------------------------~~~l~~~d~~~~~~------~~l~~  233 (388)
T 3pe7_A          199 DDSTVAFCHEGP------HDLV---------------------------------DARMWLINEDGTNM------RKVKT  233 (388)
T ss_dssp             EEEEEEEEECSC------TTTS---------------------------------SCSEEEEETTSCCC------EESCC
T ss_pred             CCCEEEEEEecC------CCCC---------------------------------cceEEEEeCCCCce------EEeee
Confidence            998887665421      0000                                 12455556554432      11122


Q ss_pred             cC--CCeEEEEEcCCCCEEEEEeC-CC----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        319 HE--KDINCVTVSPNDKLLASGSL-DK----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       319 ~~--~~v~~~~~s~~~~~l~~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                      +.  ..+..++|+|||+.|+..+. ++    .|++||+. +++......                              +
T Consensus       234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~-~g~~~~l~~------------------------------~  282 (388)
T 3pe7_A          234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE-TLENRQLTS------------------------------M  282 (388)
T ss_dssp             CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT-TCCEEEEEE------------------------------E
T ss_pred             CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC-CCceEEEEc------------------------------C
Confidence            22  24778899999997765443 22    27777766 222111111                              0


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE---------eCCCcEEEEECCCceeeeEeecCCc-------
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS---------SGDATIKLWCLTDYVCLKSLEGHDA-------  455 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~~~~-------  455 (537)
                      ..    .......+          ..++|+|||+.|+..         ..+..|++||+.+++. ..+..|..       
T Consensus       283 ~~----~~~~~~~~----------~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~  347 (388)
T 3pe7_A          283 PA----CSHLMSNY----------DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEG  347 (388)
T ss_dssp             CC----EEEEEECT----------TSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTT
T ss_pred             CC----ceeeeecC----------CCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCccccccc
Confidence            00    00000111          112577787776653         4567899999998765 44555555       


Q ss_pred             ----ceEEEEEecCCCEEEEEeC-CCcEEEEEC
Q psy10942        456 ----SVLRCHFINKGTQIVSTGA-DGLLKLWSI  483 (537)
Q Consensus       456 ----~v~~~~~s~~~~~l~s~~~-dg~v~vwd~  483 (537)
                          .+..++|+|||+.|+..+. +|...+|.+
T Consensus       348 ~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             BSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             ccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence                5788999999998887664 666666654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.76  E-value=3.8e-16  Score=144.87  Aligned_cols=262  Identities=10%  Similarity=0.042  Sum_probs=181.9

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      -+.+.++   +++|+|+++++...++.+.  ++......            .+..+....       ..++.|.+||..+
T Consensus        23 l~~v~~v---a~d~~G~l~v~~~~~~~~~--~~~~~~~~------------~~~~~~~~~-------~~~~~i~~~d~~~   78 (329)
T 3fvz_A           23 PGQVSGV---ALDSKNNLVIFHRGDHVWD--GNSFDSKF------------VYQQRGLGP-------IEEDTILVIDPNN   78 (329)
T ss_dssp             CSCEEEE---EECTTCCEEEEECTTCCCC--TTSBCTTS------------CBSCGGGCS-------CCSCCEEEECTTT
T ss_pred             cCCceEE---EECCCCCEEEEeCCCCeEE--eeccCcce------------eeccccccc-------ccCCcEEEEECCC
Confidence            5679999   9999999999988888777  76655421            111111111       1367899999987


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-------------------eEEEEecC-C
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-------------------LNVLRGHK-K  364 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-------------------~~~~~~~~-~  364 (537)
                      ++.....    ...+......++++|+|+++++...++.|++||.......                   ...+...+ +
T Consensus        79 g~~~~~~----~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~  154 (329)
T 3fvz_A           79 AEILQSS----GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST  154 (329)
T ss_dssp             CCEEEEE----CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred             CeEEecc----CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence            7653221    1244457899999999998888888899999998632112                   23345555 6


Q ss_pred             CCEEEEEc-CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECC
Q psy10942        365 GTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLT  442 (537)
Q Consensus       365 ~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~  442 (537)
                      +.++++.+ .++.|++|| .+++.+..+.......     .+....  ......++++|+ ++++++...++.|++||..
T Consensus       155 g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~-----~~~~~~--~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~  226 (329)
T 3fvz_A          155 GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGS-----SPRPGQ--FSVPHSLALVPHLDQLCVADRENGRIQCFKTD  226 (329)
T ss_dssp             CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSS-----SCCTTE--ESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCC-----CCCCcc--cCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence            77777776 689999999 5566555543211100     000000  014788999998 7777777788999999999


Q ss_pred             CceeeeEee--cCCcceEEEEEecCCCEEEEE-------eCCCcEEEEECCCCeeEEEec---CCccceeccCCCCCCcc
Q psy10942        443 DYVCLKSLE--GHDASVLRCHFINKGTQIVST-------GADGLLKLWSIKTSTCVSTFD---KHALKIRNSDSENDHKG  510 (537)
Q Consensus       443 ~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~-------~~dg~v~vwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~  510 (537)
                      +++.+..+.  .+...+..++|+| +..+++.       ..+..|++|+..+++.+..+.   ++....           
T Consensus       227 ~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p-----------  294 (329)
T 3fvz_A          227 TKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP-----------  294 (329)
T ss_dssp             TCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE-----------
T ss_pred             CCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe-----------
Confidence            888888874  3556788999999 4333333       334589999999999998874   444445           


Q ss_pred             ccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        511 FGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       511 ~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .++   +++|+|.++++...++.|++|
T Consensus       295 ~~i---a~~~dG~lyvad~~~~~I~~~  318 (329)
T 3fvz_A          295 HDI---VASEDGTVYIGDAHTNTVWKF  318 (329)
T ss_dssp             EEE---EECTTSEEEEEESSSCCEEEE
T ss_pred             eEE---EECCCCCEEEEECCCCEEEEE
Confidence            778   999999888888889999876

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.75  E-value=6.1e-17  Score=165.82  Aligned_cols=300  Identities=11%  Similarity=-0.027  Sum_probs=181.6

Q ss_pred             CcEEEEEe--CccceEEeeeccceehhhhcCCC-cceE---------EEEEe--ccccE-EEEEeC-CceEEEEecc--c
Q psy10942         66 GKTFVLAG--GEKSLLHYYETSAVKELYQHGLS-SPLV---------RIVRS--SVKRM-YAVVTA-DHNISLYRLN--S  127 (537)
Q Consensus        66 ~~~~~~~~--~~~~~i~~wd~~~~~~~~~~~~~-~~v~---------~~~~s--~~~~~-la~~~~-d~~i~iwd~~--~  127 (537)
                      +..+++..  +.++...+|....+.....+..+ ..+.         ..+|+  |||++ |+.++. +..|.++++.  +
T Consensus        34 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g  113 (662)
T 3azo_A           34 DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPG  113 (662)
T ss_dssp             TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTT
T ss_pred             CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCC
Confidence            65666666  56788899986444444444433 3444         55565  99999 877654 4456666655  1


Q ss_pred             ccCcccccccccceeEEeec-----chhhhhhhhcccCCCccEEEeeecc------ccCCcccceeecccCCCcchhhHH
Q psy10942        128 ETGLEERPNKILKFRKQFVG-----FSDEILDIALLGEEDSHIVVASNEY------LNGGDLSGLVKLGANRSHNEWFDK  196 (537)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~  196 (537)
                                 ....+.+..     |...+..++|+ |+++.|++++.+.      .....|                 .
T Consensus       114 -----------~~~~~~l~~~~~~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i-----------------~  164 (662)
T 3azo_A          114 -----------GAVPRPLTPVSAVGGGLRWADPVLL-PERGEVWCMAEEFTGEGPSDVRRFL-----------------A  164 (662)
T ss_dssp             -----------CCCCEECSCCCCSTTCEEEEEEEEE-TTTTEEEEEEEEECSSSTTCEEEEE-----------------E
T ss_pred             -----------CCCCEeccCCccCCCCccccCcEEC-CCCCEEEEEEecccCCCCCCceeEE-----------------E
Confidence                       022334444     56678899999 7888888877652      111237                 7


Q ss_pred             HHHHHHHhhhccc------cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc
Q psy10942        197 TFERILEAKFKQS------SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG  268 (537)
Q Consensus       197 ~wd~~~~~~~~~~------~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~  268 (537)
                      +||+       .+      +...  ..     .+  ...+..+   +|||||++|+..+.++...  -|+.         
T Consensus       165 ~~~~-------~~~~~~~~~~~~~l~~-----~~--~~~~~~~---~~SpDG~~la~~~~~~~~~--~~~~---------  216 (662)
T 3azo_A          165 AVPL-------DGSAAADRSAVRELSD-----DA--HRFVTGP---RLSPDGRQAVWLAWDHPRM--PWEG---------  216 (662)
T ss_dssp             EEET-------TSTTTTCGGGSEESSC-----SC--SSEECCC---EECTTSSEEEEEEECTTCC--TTTC---------
T ss_pred             EEEC-------CCCccccCCceeEEEe-----cC--CCcccCc---eECCCCCEEEEEECCCCCC--CCCC---------
Confidence            8887       55      3333  21     34  4677788   9999999999877665444  3431         


Q ss_pred             ccccccceeeeeeCCcceEEEEEeCCCeEEEEECC-CCc--eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc--
Q psy10942        269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT-GGL--KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT--  343 (537)
Q Consensus       269 ~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~-~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--  343 (537)
                                                ..|++||+. ++.  ..    ......|...+..++|+|||++++++..++.  
T Consensus       217 --------------------------~~i~~~d~~~~g~~~~~----~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~  266 (662)
T 3azo_A          217 --------------------------TELKTARVTEDGRFADT----RTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN  266 (662)
T ss_dssp             --------------------------EEEEEEEECTTSCEEEE----EEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred             --------------------------cEEEEEEECCCCccccc----EEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence                                      257788887 341  21    1222345678999999999998888877874  


Q ss_pred             EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942        344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL  423 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~  423 (537)
                      |.+||+. ..+... +..+                                ...+....+++        .+..++|+|+
T Consensus       267 l~~~~~~-~~~~~~-l~~~--------------------------------~~~~~~p~w~~--------~~~~~~~~~~  304 (662)
T 3azo_A          267 LHRVDPA-TGAATQ-LCRR--------------------------------EEEFAGPLWTP--------GMRWFAPLAN  304 (662)
T ss_dssp             EEEECTT-TCCEEE-SSCC--------------------------------SSBSSCCCCST--------TCCSEEECTT
T ss_pred             EEEEECC-CCceee-cccc--------------------------------cccccCccccc--------cCceEeEeCC
Confidence            4444443 222111 1100                                00011111221        2456889999


Q ss_pred             CCEEEEEeCCCcEEEE--ECCCceeeeEeecCCcceEEE-EEecCCCEEEEEeCCC--cEEEEECCCCeeEEEecCCc
Q psy10942        424 DRILISSSGDATIKLW--CLTDYVCLKSLEGHDASVLRC-HFINKGTQIVSTGADG--LLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       424 ~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~  496 (537)
                      +++++++.. +.+++|  |+.+++ +..+..|...+..+ .++++.-++++++.+.  .|.++|+.+++.......+.
T Consensus       305 ~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~  380 (662)
T 3azo_A          305 GLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHT  380 (662)
T ss_dssp             SCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCC
T ss_pred             CEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCc
Confidence            999999998 999999  655555 67777777777776 4444333344445554  46666777777654444443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.74  E-value=4.9e-17  Score=155.49  Aligned_cols=304  Identities=9%  Similarity=-0.041  Sum_probs=172.3

Q ss_pred             EEEEcCccceeeeeccccc------cceeeeEeecCccccccCCcEEEEEe-Cc--cceEEeeeccceehhhhcCCCcce
Q psy10942         29 FTWDLSSRKQLRSYPAYES------LETCAVFHLSDETESKSGGKTFVLAG-GE--KSLLHYYETSAVKELYQHGLSSPL   99 (537)
Q Consensus        29 ~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~i~~wd~~~~~~~~~~~~~~~v   99 (537)
                      ...|..+++.+..+.....      +...  .++|        ++++++.. ..  +..|.+||+.+++...........
T Consensus        13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~--~~Sp--------dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~   82 (396)
T 3c5m_A           13 TFVDSDTQVKVTRLTPTDIICHRNYFYQK--CFTQ--------DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDN   82 (396)
T ss_dssp             EEECTTTCCEEEECSCTTSCEECCCTTSC--CBCT--------TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBC
T ss_pred             eeecCCCCcceEEEecCCCCccceeeecC--cCCC--------CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCc
Confidence            4458888887776653221      3344  4577        55555544 32  346888999888765444444433


Q ss_pred             E-EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-------------------hhccc
Q psy10942        100 V-RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-------------------IALLG  159 (537)
Q Consensus       100 ~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~  159 (537)
                      . .+.|||||++|+.++.++.|++||+.+           ++.......+......                   +.|+ 
T Consensus        83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~-----------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s-  150 (396)
T 3c5m_A           83 TFGGFISTDERAFFYVKNELNLMKVDLET-----------LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQ-  150 (396)
T ss_dssp             TTTCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC-
T ss_pred             cccceECCCCCEEEEEEcCCcEEEEECCC-----------CCcEEEEecccccCCCCCEEEeccCCccccccccccccC-
Confidence            3 378999999999999999999999988           3433333333321111                   3444 


Q ss_pred             CCCccEEEeee---ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccC
Q psy10942        160 EEDSHIVVASN---EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGK  235 (537)
Q Consensus       160 ~~~~~l~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~  235 (537)
                      |+++.+++...   ...  ..|                 .+||+       .+++.. +.     .+  ...+..+   .
T Consensus       151 pdg~~~~~~~~~~~~~~--~~l-----------------~~~d~-------~~g~~~~~~-----~~--~~~~~~~---~  194 (396)
T 3c5m_A          151 PLTSWEKFAEFYHTNPT--CRL-----------------IKVDI-------ETGELEVIH-----QD--TAWLGHP---I  194 (396)
T ss_dssp             CCCSHHHHHHHHHTCCC--EEE-----------------EEEET-------TTCCEEEEE-----EE--SSCEEEE---E
T ss_pred             CCCcceeeeeeccCCCc--ceE-----------------EEEEC-------CCCcEEeec-----cC--Ccccccc---e
Confidence            34443332210   111  124                 55666       555444 43     45  5667788   8


Q ss_pred             ccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942        236 TVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG  314 (537)
Q Consensus       236 ~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~  314 (537)
                      |+| +++.|+..+.++.      +.                                 ....|.+|++.++...     .
T Consensus       195 ~sp~dg~~l~~~~~~~~------~~---------------------------------~~~~l~~~d~~~~~~~-----~  230 (396)
T 3c5m_A          195 YRPFDDSTVGFCHEGPH------DL---------------------------------VDARMWLVNEDGSNVR-----K  230 (396)
T ss_dssp             EETTEEEEEEEEECSCS------SS---------------------------------CSCCCEEEETTSCCCE-----E
T ss_pred             ECCCCCCEEEEEecCCC------CC---------------------------------CCceEEEEECCCCcee-----E
Confidence            888 7776665443211      00                                 0124555665544311     1


Q ss_pred             ccccc-CCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeee
Q psy10942        315 HKKGH-EKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV  388 (537)
Q Consensus       315 ~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  388 (537)
                      ..... ...+..++|+|+|+.|+.++.+     +.|++||+.                                 +++..
T Consensus       231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---------------------------------~g~~~  277 (396)
T 3c5m_A          231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE---------------------------------TLENE  277 (396)
T ss_dssp             SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT---------------------------------TCCEE
T ss_pred             eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC---------------------------------CCCeE
Confidence            11111 2347789999999987776543     226666654                                 22211


Q ss_pred             eeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEe----------------CCCcEEEEECCCceeeeEee
Q psy10942        389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSS----------------GDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~  451 (537)
                      ......                   ... +.|+| ||+++++++                .+..|++||+.+++. ..+.
T Consensus       278 ~l~~~~-------------------~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~  336 (396)
T 3c5m_A          278 EVMVMP-------------------PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLC  336 (396)
T ss_dssp             EEEECC-------------------SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEE
T ss_pred             EeeeCC-------------------CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEcc
Confidence            110000                   111 56777 888777654                347899999988764 3454


Q ss_pred             cCCc-----------ceEEEEEecCCCEEEEEeC-CCcE--EEEECCCCee
Q psy10942        452 GHDA-----------SVLRCHFINKGTQIVSTGA-DGLL--KLWSIKTSTC  488 (537)
Q Consensus       452 ~~~~-----------~v~~~~~s~~~~~l~s~~~-dg~v--~vwd~~~~~~  488 (537)
                      .+..           .+..++|+|||+.|+.++. ++..  +.+++.+++.
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~  387 (396)
T 3c5m_A          337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK  387 (396)
T ss_dssp             ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred             CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence            4544           2567899999999887765 4544  4445555443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.72  E-value=3.7e-16  Score=159.95  Aligned_cols=204  Identities=9%  Similarity=-0.022  Sum_probs=129.6

Q ss_pred             eeeeeeeeccCCcceEEEe--cCcceEEEEEcCccceeeeec-cccccc-------eeeeEee--cCccccccCCcE-EE
Q psy10942          4 CVTCFDVIPQITSEFSVHC--GRDKVLFTWDLSSRKQLRSYP-AYESLE-------TCAVFHL--SDETESKSGGKT-FV   70 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~--~~~g~v~iwd~~~~~~~~~~~-~~~~~~-------~~~~~~~--~~~~~~~~~~~~-~~   70 (537)
                      .|..++|+  +++-++++.  ++++...||....+...+.+. ....+.       ...+.++  |+       +.. ++
T Consensus        25 ~~~~~~~s--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD-------g~~~la   95 (662)
T 3azo_A           25 RPACVGAV--GDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPA-------GGPLLV   95 (662)
T ss_dssp             CCEEEEEE--TTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSS-------SSCEEE
T ss_pred             ccceeEEc--CCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecC-------CCeEEE
Confidence            46788899  787778877  678899999964444444333 222322       0122344  63       334 34


Q ss_pred             EEeCccceEEeeecc--c-eehhhhcCC------CcceEEEEEeccccEEEEEeCC----------ceEEEEecccccCc
Q psy10942         71 LAGGEKSLLHYYETS--A-VKELYQHGL------SSPLVRIVRSSVKRMYAVVTAD----------HNISLYRLNSETGL  131 (537)
Q Consensus        71 ~~~~~~~~i~~wd~~--~-~~~~~~~~~------~~~v~~~~~s~~~~~la~~~~d----------~~i~iwd~~~~~~~  131 (537)
                      ++...+..|.++++.  . ++ ...+..      ...+..++|||||+.|++++.+          ..|++||+.+....
T Consensus        96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  174 (662)
T 3azo_A           96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA  174 (662)
T ss_dssp             EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred             EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence            444446677777776  3 43 333332      3578999999999999998877          58999998771000


Q ss_pred             ccccccccceeEEee-cchhhhhhhhcccCCCccEEEeeeccc----cCCcccceeecccCCCcchhhHHHHHHHHHhhh
Q psy10942        132 EERPNKILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEYL----NGGDLSGLVKLGANRSHNEWFDKTFERILEAKF  206 (537)
Q Consensus       132 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~  206 (537)
                           . ....+.+. .+...+..++|+ ||++.|++++.+..    ....|                 ++||+      
T Consensus       175 -----~-~~~~~~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i-----------------~~~d~------  224 (662)
T 3azo_A          175 -----D-RSAVRELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTEL-----------------KTARV------  224 (662)
T ss_dssp             -----C-GGGSEESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEE-----------------EEEEE------
T ss_pred             -----c-CCceeEEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEE-----------------EEEEE------
Confidence                 0 02233444 555678889999 78888887775542    01236                 77887      


Q ss_pred             cc-cc---ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccccc
Q psy10942        207 KQ-SS---SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRK  260 (537)
Q Consensus       207 ~~-~~---~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~  260 (537)
                       . ++   +..  ..     +|  ...+..+   .|+|||++++++..++...  +|.++
T Consensus       225 -~~~g~~~~~~~l~~-----~~--~~~~~~~---~~spdg~l~~~~~~~~~~~--l~~~~  271 (662)
T 3azo_A          225 -TEDGRFADTRTLLG-----GP--EEAIAQA---EWAPDGSLIVATDRTGWWN--LHRVD  271 (662)
T ss_dssp             -CTTSCEEEEEEEEE-----ET--TBCEEEE---EECTTSCEEEEECTTSSCE--EEEEC
T ss_pred             -CCCCcccccEEeCC-----CC--CceEcce---EECCCCeEEEEECCCCCeE--EEEEE
Confidence             6 34   322  33     56  6788999   9999999777887777555  55443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.70  E-value=7e-15  Score=144.70  Aligned_cols=319  Identities=11%  Similarity=0.051  Sum_probs=201.9

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecc--cccCcccccccccceeE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN--SETGLEERPNKILKFRK  143 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~  143 (537)
                      +..++++...++.|.++|..+++.+.++.....+..++|||||++|++++.|+.|.+||+.  +           .+.+.
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t-----------~~~v~  234 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE-----------PTTVA  234 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS-----------CCEEE
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCC-----------CcEeE
Confidence            4577888888999999999999999888877788899999999999999999999999996  5           56666


Q ss_pred             Eeecchhhhhhhhccc---CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc
Q psy10942        144 QFVGFSDEILDIALLG---EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE  218 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~---~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~  218 (537)
                      ++..... ...++|++   |++++++++....   +.+                 .++|.       .+.+.+  +....
T Consensus       235 ~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~---~~v-----------------~ViD~-------~t~~~~~~i~~~~  286 (567)
T 1qks_A          235 EIKIGSE-ARSIETSKMEGWEDKYAIAGAYWP---PQY-----------------VIMDG-------ETLEPKKIQSTRG  286 (567)
T ss_dssp             EEECCSE-EEEEEECCSTTCTTTEEEEEEEET---TEE-----------------EEEET-------TTCCEEEEEECCE
T ss_pred             EEecCCC-CceeEEccccCCCCCEEEEEEccC---CeE-----------------EEEEC-------CCCcEEEEEeccc
Confidence            6665443 57889995   5888887765542   336                 66676       554443  11000


Q ss_pred             --cc---cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942        219 --RL---GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       219 --~~---~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  293 (537)
                        ..   .|. ...+..+   ..++++..                                            +++....
T Consensus       287 ~~~~~~~~~p-~~rva~i---~~s~~~~~--------------------------------------------~vv~~~~  318 (567)
T 1qks_A          287 MTYDEQEYHP-EPRVAAI---LASHYRPE--------------------------------------------FIVNVKE  318 (567)
T ss_dssp             ECTTTCCEES-CCCEEEE---EECSSSSE--------------------------------------------EEEEETT
T ss_pred             cccccccccC-CCceEEE---EEcCCCCE--------------------------------------------EEEEecC
Confidence              00   010 1123334   33433222                                            2233334


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEe-cCCCCEEEEE
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRG-HKKGTQIVST  371 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~~~~~~l~~~  371 (537)
                      +|.|.++|......+...   . ........++.|+|++++++++. .++.|.++|+. ..+.+..+.. ...       
T Consensus       319 ~g~v~~vd~~~~~~~~v~---~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~-t~kl~~~i~vgg~~-------  386 (567)
T 1qks_A          319 TGKILLVDYTDLNNLKTT---E-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK-EGKLVAIEDTGGQT-------  386 (567)
T ss_dssp             TTEEEEEETTCSSEEEEE---E-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSSS-------
T ss_pred             CCeEEEEecCCCccceee---e-eeccccccCceECCCCCEEEEEeCCCCeEEEEECC-CCcEEEEEeccCcC-------
Confidence            466666666554321110   1 11233466889999999887765 56789999988 5555544432 100       


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEe-CCCcEEEEECCC------
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSS-GDATIKLWCLTD------  443 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-~dg~i~i~d~~~------  443 (537)
                                           .|...                ++.  -++|++ ..+++.. .++.|.++|..+      
T Consensus       387 ---------------------Phpg~----------------g~~--~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~  427 (567)
T 1qks_A          387 ---------------------PHPGR----------------GAN--FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDN  427 (567)
T ss_dssp             ---------------------BCCTT----------------CEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred             ---------------------CCCcc----------------cee--eECCCCCcEEEeCCCCCCeEEEecCCCCCCccc
Confidence                                 01000                111  146764 4444443 468999999987      


Q ss_pred             -ceeeeEeecCCcceEEEEEecCCCEEEEEeC-------CCcEEEEECCCC-----e-eEEEecC--------Cccceec
Q psy10942        444 -YVCLKSLEGHDASVLRCHFINKGTQIVSTGA-------DGLLKLWSIKTS-----T-CVSTFDK--------HALKIRN  501 (537)
Q Consensus       444 -~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------dg~v~vwd~~~~-----~-~~~~~~~--------~~~~i~~  501 (537)
                       ++.+.++......-..+..+|++++|.+...       .++|.++|+.+.     . ....+..        ....+  
T Consensus       428 ~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--  505 (567)
T 1qks_A          428 AWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRV--  505 (567)
T ss_dssp             BTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEE--
T ss_pred             cCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcce--
Confidence             6788888765444455788999999998763       358999999876     2 1122321        11233  


Q ss_pred             cCCCCCCccccccceeeecCCCEEEEEeC-----CCCEEe
Q psy10942        502 SDSENDHKGFGLPRQLCSRNSDCEYRGGW-----SPQVVV  536 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-----dg~i~v  536 (537)
                               ..+   .|+|+|+.+..+..     ++.|.|
T Consensus       506 ---------~~~---~~~~~G~~~~~s~~~~~~~~~~i~v  533 (567)
T 1qks_A          506 ---------VQG---EFNKDGTEVWFSVWNGKDQESALVV  533 (567)
T ss_dssp             ---------EEE---EECTTSSEEEEEEECCTTSCCEEEE
T ss_pred             ---------Eee---eECCCCCEEEEEeecCCCCCCcEEE
Confidence                     666   99999998877633     566654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.66  E-value=7.9e-14  Score=126.61  Aligned_cols=107  Identities=11%  Similarity=0.170  Sum_probs=84.0

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCCC-cEEEEECCCCeeEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGADG-LLKLWSIKTSTCVS  490 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg-~v~vwd~~~~~~~~  490 (537)
                      .+..++++|+++++++...++.|++||.. ++.+..+..+  ...+..++++++|+++++...++ .|++|+. +++.+.
T Consensus       165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~  242 (286)
T 1q7f_A          165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLIS  242 (286)
T ss_dssp             SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEE
T ss_pred             CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEE
Confidence            56789999999988887788999999974 5566666433  35689999999999888888776 9999995 677777


Q ss_pred             EecCCcc--ceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        491 TFDKHAL--KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       491 ~~~~~~~--~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .+..+..  .+           .++   +++|+|+++++ +.|+.|++|
T Consensus       243 ~~~~~~~~~~~-----------~~i---~~~~~g~l~vs-~~~~~v~v~  276 (286)
T 1q7f_A          243 ALESKVKHAQC-----------FDV---ALMDDGSVVLA-SKDYRLYIY  276 (286)
T ss_dssp             EEEESSCCSCE-----------EEE---EEETTTEEEEE-ETTTEEEEE
T ss_pred             EEcccCCCCcc-----------eeE---EECCCCcEEEE-CCCCeEEEE
Confidence            7765432  23           577   99999987776 679999987

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.64  E-value=8.9e-15  Score=137.02  Aligned_cols=285  Identities=8%  Similarity=0.019  Sum_probs=170.3

Q ss_pred             cceEEEEEeccccEEEEEe---------CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         97 SPLVRIVRSSVKRMYAVVT---------ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      ..+...++  ||+++|...         .++.|.+||+.+           .+. +.+    ..+..++|+ |+++.|++
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~-----------~~~-~~l----~~~~~~~~S-pDg~~la~   75 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKN-----------NAR-RFI----ENATMPRIS-PDGKKIAF   75 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTT-----------CCE-EEE----ESCEEEEEC-TTSSEEEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCC-----------Cce-EEc----ccCCCeEEC-CCCCEEEE
Confidence            46777888  999887753         256799999987           332 233    347788999 78888887


Q ss_pred             eeecc-ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        168 ASNEY-LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       168 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      +.... .....|                 .+|++       .+++.. +.     .+  .. +..+   +|+|||+.|+.
T Consensus        76 ~~~~~~~~~~~l-----------------~~~~~-------~~g~~~~l~-----~~--~~-~~~~---~wspdg~~l~~  120 (347)
T 2gop_A           76 MRANEEKKVSEI-----------------WVADL-------ETLSSKKIL-----EA--KN-IRSL---EWNEDSRKLLI  120 (347)
T ss_dssp             EEEETTTTEEEE-----------------EEEET-------TTTEEEEEE-----EE--SE-EEEE---EECTTSSEEEE
T ss_pred             EEeccCCCcceE-----------------EEEEC-------CCCceEEEE-----cC--CC-ccce---eECCCCCEEEE
Confidence            76543 101236                 66677       666555 44     44  34 8899   99999999987


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC  325 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~  325 (537)
                      ++.+..-.      ..    ...     ...+......  .. ........|.+||+.+++....+     .. . .+..
T Consensus       121 ~~~~~~~~------~~----~~~-----~~~~~~~~~g--~~-~~~~~~~~l~~~d~~~~~~~~~l-----~~-~-~~~~  175 (347)
T 2gop_A          121 VGFKRRED------ED----FIF-----EDDVPAWFDD--LG-FFDGEKTTFWIFDTESEEVIEEF-----EK-P-RFSS  175 (347)
T ss_dssp             EEECCCC------------------------CCCC------------CEEEEEEEETTTTEEEEEE-----EE-E-TTCE
T ss_pred             EEccCCCc------CC----cEE-----EcccceeecC--cc-cccCccceEEEEECCCCeEEeee-----cC-C-Cccc
Confidence            76431000      00    000     0000000000  00 00112357899999887642222     12 2 6788


Q ss_pred             EEEcCCCCEEEEEeCCC-------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        326 VTVSPNDKLLASGSLDK-------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       326 ~~~s~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      ++|+||| +++++..+.       ...+|                               ++|  +++.. .+..+ .  
T Consensus       176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~-------------------------------~~d--~~~~~-~l~~~-~--  217 (347)
T 2gop_A          176 GIWHRDK-IVVNVPHREIIPQYFKFWDIY-------------------------------IWE--DGKEE-KMFEK-V--  217 (347)
T ss_dssp             EEEETTE-EEEEEECCCSSCCSSCCEEEE-------------------------------EEE--TTEEE-EEEEE-E--
T ss_pred             ccCCCCe-EEEEEecccccccccccccEE-------------------------------EeC--CCceE-EeccC-c--
Confidence            9999999 777775543       12222                               222  22111 11000 0  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--------CcEEEEECCCceeeeEeecCCcceEE-EEEecCCCEE
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--------ATIKLWCLTDYVCLKSLEGHDASVLR-CHFINKGTQI  469 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l  469 (537)
                                     .+..+  +|||++|+.++.+        ..|.+||  +++.......|...+.. +.|+ ++ ++
T Consensus       218 ---------------~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~  276 (347)
T 2gop_A          218 ---------------SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VY  276 (347)
T ss_dssp             ---------------SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EE
T ss_pred             ---------------ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EE
Confidence                           22333  7888888777643        3688888  55555555556677886 8999 88 88


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE-EeC
Q psy10942        470 VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV-VVY  537 (537)
Q Consensus       470 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i-~vW  537 (537)
                      ++++.++.+++| +.+++.... ..+...+           .++   +|+|  .++++++.++.. .||
T Consensus       277 ~~~~~~~~~~l~-~~~g~~~~~-~~~~~~v-----------~~~---~~s~--~~~~~~~~~~~~~~l~  327 (347)
T 2gop_A          277 FTLFEEGSVNLY-IWDGEIKPI-AKGRHWI-----------MGF---DVDE--IVVYLKETATRLRELF  327 (347)
T ss_dssp             EEEEETTEEEEE-EESSSEEEE-ECSSSEE-----------EEE---EESS--SEEEEEECSSSCCEEE
T ss_pred             EEEecCCcEEEE-EcCCceEEE-ecCCCeE-----------Eee---eeeC--cEEEEEcCCCChHHhe
Confidence            999999999999 876665443 3446677           778   9999  677777777654 554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.64  E-value=7.9e-14  Score=126.58  Aligned_cols=242  Identities=13%  Similarity=0.163  Sum_probs=159.8

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee------cchhhhhhhhcccCCCccEEEeee
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV------GFSDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                      ..+.+++++|+++++++...++.|.+||...            +....+.      ++...+..+++.++++ .++++..
T Consensus        30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g------------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~   96 (286)
T 1q7f_A           30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEG------------RFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTER   96 (286)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTTS------------CEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEEC
T ss_pred             CCCceEEECCCCCEEEEECCCCEEEEECCCC------------cEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcC
Confidence            4689999999999888888889999999775            2333332      2334567888852444 4545443


Q ss_pred             ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                      ...  +.|                 .+||.       ...... +.    ..+  ...+.++   +++|+|+++++...+
T Consensus        97 ~~~--~~i-----------------~~~d~-------~g~~~~~~~----~~~--~~~~~~i---~~~~~g~l~v~~~~~  141 (286)
T 1q7f_A           97 SPT--HQI-----------------QIYNQ-------YGQFVRKFG----ATI--LQHPRGV---TVDNKGRIIVVECKV  141 (286)
T ss_dssp             GGG--CEE-----------------EEECT-------TSCEEEEEC----TTT--CSCEEEE---EECTTSCEEEEETTT
T ss_pred             CCC--CEE-----------------EEECC-------CCcEEEEec----Ccc--CCCceEE---EEeCCCCEEEEECCC
Confidence            211  227                 66665       322222 21    023  4567888   899999877777777


Q ss_pred             CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS  329 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  329 (537)
                      +.|.  +|+....                                 .+..+..              ..+...+.+++++
T Consensus       142 ~~i~--~~~~~g~---------------------------------~~~~~~~--------------~~~~~~p~~i~~~  172 (286)
T 1q7f_A          142 MRVI--IFDQNGN---------------------------------VLHKFGC--------------SKHLEFPNGVVVN  172 (286)
T ss_dssp             TEEE--EECTTSC---------------------------------EEEEEEC--------------TTTCSSEEEEEEC
T ss_pred             CEEE--EEcCCCC---------------------------------EEEEeCC--------------CCccCCcEEEEEC
Confidence            7777  7775431                                 1111111              0223457899999


Q ss_pred             CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      |+++++++...++.|++||.. . +.+..+..+                              ++..             
T Consensus       173 ~~g~l~v~~~~~~~i~~~~~~-g-~~~~~~~~~------------------------------g~~~-------------  207 (286)
T 1q7f_A          173 DKQEIFISDNRAHCVKVFNYE-G-QYLRQIGGE------------------------------GITN-------------  207 (286)
T ss_dssp             SSSEEEEEEGGGTEEEEEETT-C-CEEEEESCT------------------------------TTSC-------------
T ss_pred             CCCCEEEEECCCCEEEEEcCC-C-CEEEEEccC------------------------------CccC-------------
Confidence            999987777778899999975 2 222222110                              0000             


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEeCCC-cEEEEECCCceeeeEeecCCc--ceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        410 IITGGVWFVNFSPLDRILISSSGDA-TIKLWCLTDYVCLKSLEGHDA--SVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                          .+..++++|+|+++++...++ .|.+||. +++.+..+..+..  .+.+++++|+|+++++ +.|+.|++|++...
T Consensus       208 ----~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          208 ----YPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             ----SEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             ----CCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence                567899999999888887776 9999995 5666777765543  3779999999987776 67999999998653

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.62  E-value=1.8e-14  Score=133.44  Aligned_cols=260  Identities=7%  Similarity=0.060  Sum_probs=162.6

Q ss_pred             cceEEEEEeccccEEEEEeCC------------------------ceEEEEecccccCcccccccccceeEEee-cchhh
Q psy10942         97 SPLVRIVRSSVKRMYAVVTAD------------------------HNISLYRLNSETGLEERPNKILKFRKQFV-GFSDE  151 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~  151 (537)
                      +.+.+++++|+|+++++...+                        +.|.+||..+           ++....+. ++-..
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~   92 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-----------AEILQSSGKNLFYL   92 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-----------CCEEEEECTTTCSS
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-----------CeEEeccCCCccCC
Confidence            579999999999988887776                        4799999987           45554443 33345


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc--cccccc----ccCCC
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ--KHNTER----LGRDE  224 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~--l~~~~~----~~h~~  224 (537)
                      +..++++ ++++.+++...+..    |                 ++||.       .... ..  +.....    .++  
T Consensus        93 p~gia~d-~~g~l~v~d~~~~~----v-----------------~~~~~-------~g~~~~~~~~~~~~~~g~~~~~--  141 (329)
T 3fvz_A           93 PHGLSID-TDGNYWVTDVALHQ----V-----------------FKLDP-------HSKEGPLLILGRSMQPGSDQNH--  141 (329)
T ss_dssp             EEEEEEC-TTSCEEEEETTTTE----E-----------------EEECT-------TCSSCCSEEESBTTBCCCSTTC--
T ss_pred             ceEEEEC-CCCCEEEEECCCCE----E-----------------EEEeC-------CCCeEEEEEecccCCCCCCccc--
Confidence            7789998 66664444443333    7                 77776       4331 11  210000    134  


Q ss_pred             cCeEEEEeccCccc-CCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        225 LKTVTLLERGKTVK-EEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       225 ~~~v~~~~~~~~s~-~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                      ......+   +++| ++.++++.+ .++.|+  +|+....                        .         +..+..
T Consensus       142 ~~~P~~i---a~~~~~g~lyv~d~~~~~~I~--~~~~~g~------------------------~---------~~~~~~  183 (329)
T 3fvz_A          142 FCQPTDV---AVEPSTGAVFVSDGYCNSRIV--QFSPSGK------------------------F---------VTQWGE  183 (329)
T ss_dssp             CSSEEEE---EECTTTCCEEEEECSSCCEEE--EECTTSC------------------------E---------EEEECE
T ss_pred             cCCCcEE---EEeCCCCeEEEEeCCCCCeEE--EEcCCCC------------------------E---------EEEecc
Confidence            4568889   9999 788888776 688888  8884431                        0         000000


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                      ....      ......+......++++|+ ++++++...++.|++|+.. .++.+..+....                  
T Consensus       184 ~g~~------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~-~G~~~~~~~~~~------------------  238 (329)
T 3fvz_A          184 ESSG------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD-TKEFVREIKHAS------------------  238 (329)
T ss_dssp             ECCS------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT-TCCEEEEECCTT------------------
T ss_pred             CCCC------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC-CCcEEEEEeccc------------------
Confidence            0000      0000122234689999998 6677777778889999887 445444443221                  


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee---cCCcceE
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE---GHDASVL  458 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~  458 (537)
                                  +...+..++++| +          +.+..+++..++...+..|++||..+++.+..+.   ++...+.
T Consensus       239 ------------~~~~~~~~~~~p-g----------~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~  295 (329)
T 3fvz_A          239 ------------FGRNVFAISYIP-G----------FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPH  295 (329)
T ss_dssp             ------------TTTCEEEEEEET-T----------EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEE
T ss_pred             ------------cCCCcceeeecC-C----------EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCee
Confidence                        112222333333 1          1111244444444456689999999999888873   5667789


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        459 RCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      .++++|+|.++++...++.|++|++.
T Consensus       296 ~ia~~~dG~lyvad~~~~~I~~~~~~  321 (329)
T 3fvz_A          296 DIVASEDGTVYIGDAHTNTVWKFTLT  321 (329)
T ss_dssp             EEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred             EEEECCCCCEEEEECCCCEEEEEeCC
Confidence            99999999888888889999999974

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.61  E-value=2.7e-13  Score=126.08  Aligned_cols=256  Identities=11%  Similarity=0.015  Sum_probs=162.1

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc--cccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                      ...|.++   .|++++..++..+.++.++  .|.-..    ......  ............  ++++++..++.|.+||.
T Consensus         5 ~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d~   73 (333)
T 2dg1_A            5 QQDLPTL---FYSGKSNSAVPIISESELQ--TITAEP----WLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKINP   73 (333)
T ss_dssp             -CCCCBC---CSCGGGGCSSCCCCGGGSC--EEECEE----EEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEECT
T ss_pred             cccccee---eecCCccceeEEeecccCc--ccccce----eEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEeC
Confidence            4557788   9999998888888888999  883221    110000  001111111112  46667788899999999


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCCcee------------eEEEEecCCCC
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGGLKL------------LNVLRGHKKGT  366 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~~------------~~~~~~~~~~~  366 (537)
                      .+++...     ....+...+.+++++|+++++++...+    +.|.+||... ...            +..+...+++.
T Consensus        74 ~~~~~~~-----~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~i~~d~~g~  147 (333)
T 2dg1_A           74 ETKEIKR-----PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-DNLQDIIEDLSTAYCIDDMVFDSKGG  147 (333)
T ss_dssp             TTCCEEE-----EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-CSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred             CCCcEEE-----EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-CEEEEEEccCccCCcccceEECCCCC
Confidence            8776421     112345779999999999988877666    6899999873 222            22333445566


Q ss_pred             EEEEEcC------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEE
Q psy10942        367 QIVSTGA------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLW  439 (537)
Q Consensus       367 ~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~  439 (537)
                      .+++...      .+.|..+|..+++.......                  ...+..++|+|++++|+.+ ..++.|.+|
T Consensus       148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~  209 (333)
T 2dg1_A          148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------------------ISVANGIALSTDEKVLWVTETTANRLHRI  209 (333)
T ss_dssp             EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------------------ESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred             EEEEeccccccCCCceEEEEeCCCCEEEEeecC------------------CCcccceEECCCCCEEEEEeCCCCeEEEE
Confidence            6655543      24455555444332211100                  0146778999999866554 457899999


Q ss_pred             ECCC-ceeeeE--------eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc------ceeccCC
Q psy10942        440 CLTD-YVCLKS--------LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL------KIRNSDS  504 (537)
Q Consensus       440 d~~~-~~~~~~--------~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~------~i~~~~~  504 (537)
                      |+.+ +..+..        +.++ ..+..++++++|+++++...++.|.+||. +++.+..+..+..      .+     
T Consensus       210 d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~-----  282 (333)
T 2dg1_A          210 ALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS-----  282 (333)
T ss_dssp             EECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC-----
T ss_pred             EecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc-----
Confidence            9863 332211        1222 35788999999998888888899999998 5777776654432      35     


Q ss_pred             CCCCccccccceeeecCCCEEEEEeCC
Q psy10942        505 ENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       505 ~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                            .++   +|+||++.|+.++.+
T Consensus       283 ------~~~---~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          283 ------THP---QFIPGTNQLIICSND  300 (333)
T ss_dssp             ------CEE---EECTTSCEEEEEEEC
T ss_pred             ------ceE---EECCCCCEEEEEeCc
Confidence                  677   999998887766554

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.60  E-value=1.9e-14  Score=134.83  Aligned_cols=270  Identities=9%  Similarity=0.037  Sum_probs=154.8

Q ss_pred             cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCC---c--eEEEEecccccCcccccccccceeEEeecchh
Q psy10942         76 KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---H--NISLYRLNSETGLEERPNKILKFRKQFVGFSD  150 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (537)
                      ++.|.+||+.+++... +   ..+..++|||||++||.++.+   +  .|.+||+.+           ++...... +..
T Consensus        42 ~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-----------g~~~~l~~-~~~  105 (347)
T 2gop_A           42 ENTIVIENLKNNARRF-I---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-----------LSSKKILE-AKN  105 (347)
T ss_dssp             EEEEEEEETTTCCEEE-E---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-----------TEEEEEEE-ESE
T ss_pred             cceEEEEeCCCCceEE-c---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-----------CceEEEEc-CCC
Confidence            6779999998876432 2   568899999999999988754   2  477778776           34333333 334


Q ss_pred             hhhhhhcccCCCccEEEeeecccc-----------------------CCcccceeecccCCCcchhhHHHHHHHHHhhhc
Q psy10942        151 EILDIALLGEEDSHIVVASNEYLN-----------------------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFK  207 (537)
Q Consensus       151 ~v~~~~~~~~~~~~l~~~~~~~~~-----------------------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~  207 (537)
                       +..++|+ |+++.|++++.+...                       ...|                 .+||+       
T Consensus       106 -~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l-----------------~~~d~-------  159 (347)
T 2gop_A          106 -IRSLEWN-EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF-----------------WIFDT-------  159 (347)
T ss_dssp             -EEEEEEC-TTSSEEEEEEECCCC---------CCCC---------CEEEE-----------------EEEET-------
T ss_pred             -ccceeEC-CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE-----------------EEEEC-------
Confidence             8899999 788888777643100                       0113                 44454       


Q ss_pred             ccccc-c-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc
Q psy10942        208 QSSSQ-Q-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV  285 (537)
Q Consensus       208 ~~~~~-~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v  285 (537)
                      .+++. . +.     .   . .+..+   .|+||| +++++..++. .  .+..                          
T Consensus       160 ~~~~~~~~l~-----~---~-~~~~~---~~spdg-~~~~~~~~~~-~--~~~~--------------------------  197 (347)
T 2gop_A          160 ESEEVIEEFE-----K---P-RFSSG---IWHRDK-IVVNVPHREI-I--PQYF--------------------------  197 (347)
T ss_dssp             TTTEEEEEEE-----E---E-TTCEE---EEETTE-EEEEEECCCS-S--CCSS--------------------------
T ss_pred             CCCeEEeeec-----C---C-Ccccc---cCCCCe-EEEEEecccc-c--cccc--------------------------
Confidence            44443 2 22     1   1 34456   677777 5555443321 0  0000                          


Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  365 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  365 (537)
                             ....|.++|  +++. ..     +..+ ..+..+  +|||+.|+.++.++.-       .             
T Consensus       198 -------~~~~l~~~d--~~~~-~~-----l~~~-~~~~~~--spdg~~l~~~~~~~~~-------~-------------  239 (347)
T 2gop_A          198 -------KFWDIYIWE--DGKE-EK-----MFEK-VSFYAV--DSDGERILLYGKPEKK-------Y-------------  239 (347)
T ss_dssp             -------CCEEEEEEE--TTEE-EE-----EEEE-ESEEEE--EECSSCEEEEECCSSS-------C-------------
T ss_pred             -------ccccEEEeC--CCce-EE-----eccC-cceeeE--CCCCCEEEEEEccccC-------C-------------
Confidence                   001344444  3221 11     1122 334444  8999988877654310       0             


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE-EEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF-VNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                           ......|.+||  +++.......+..                 .+.. +.|+ |+ ++++++.++.+++| +.++
T Consensus       240 -----~~~~~~l~~~d--~~~~~~l~~~~~~-----------------~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g  292 (347)
T 2gop_A          240 -----MSEHNKLYIYD--GKEVMGILDEVDR-----------------GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG  292 (347)
T ss_dssp             -----CCSSCEEEEEC--SSCEEESSTTCCS-----------------EEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred             -----ccccceEEEEC--CCceEeccccCCc-----------------ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence                 00112333344  2222222222222                 4554 7888 88 88899999999999 8766


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcE-EEEECCCCeeEEEecCCccce
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLL-KLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v-~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +.. .+..+...|.+++|+|  .++++++.++.. .+|.++ ++ ...+..|...+
T Consensus       293 ~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~  343 (347)
T 2gop_A          293 EIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI  343 (347)
T ss_dssp             SEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred             ceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence            554 3444577899999999  677777777665 777776 54 45566665543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.59  E-value=7.7e-13  Score=120.67  Aligned_cols=205  Identities=12%  Similarity=0.035  Sum_probs=140.1

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE--------
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV--------  358 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------  358 (537)
                      +++++..++.|..|+..++ . ..     +..+...+.+++++|+|+++++...++.|.+||.. .++....        
T Consensus        42 l~~~~~~~~~i~~~~~~~~-~-~~-----~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~  113 (296)
T 3e5z_A           42 VIFSDVRQNRTWAWSDDGQ-L-SP-----EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP-GGEWESIADSFEGKK  113 (296)
T ss_dssp             EEEEEGGGTEEEEEETTSC-E-EE-----EESSCSSEEEEEECTTCCEEEEETTTTEEEEECST-TCCEEEEECEETTEE
T ss_pred             EEEEeCCCCEEEEEECCCC-e-EE-----EECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC-CCcEEEEeeccCCCC
Confidence            6778888899999999887 2 11     22355678999999999988877777899999985 2332221        


Q ss_pred             ------EEecCCCCEEEEE----c-------------CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        359 ------LRGHKKGTQIVST----G-------------ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       359 ------~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                            +...++|.++++.    +             ..+.|..++.. ++. ..+..+..                 ..
T Consensus       114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~-----------------~~  174 (296)
T 3e5z_A          114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRV-----------------KP  174 (296)
T ss_dssp             CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCS-----------------SE
T ss_pred             CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCC-----------------CC
Confidence                  2233445555542    1             01233333333 221 11111111                 45


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECC-Ccee---eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLT-DYVC---LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      ..++|+|+++.+++.+.++.|.+|++. +++.   ...+..+...+..++++++|+++++.  ++.|.+|+.+ ++.+..
T Consensus       175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~  251 (296)
T 3e5z_A          175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR  251 (296)
T ss_dssp             EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred             ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence            789999999988777778999999986 4444   23333355567889999999877666  7889999985 888888


Q ss_pred             ecCCccceeccCCCCCCccccccceee-ecCCCEEEEEeCCCCEEe
Q psy10942        492 FDKHALKIRNSDSENDHKGFGLPRQLC-SRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~-s~~~~~l~s~~~dg~i~v  536 (537)
                      +..+.. +           .++   +| +|+++.|++++.++..++
T Consensus       252 ~~~~~~-~-----------~~~---~f~~~d~~~L~v~t~~~l~~~  282 (296)
T 3e5z_A          252 VLTPQT-T-----------SNL---CFGGPEGRTLYMTVSTEFWSI  282 (296)
T ss_dssp             EECSSC-C-----------CEE---EEESTTSCEEEEEETTEEEEE
T ss_pred             EECCCC-c-----------eeE---EEECCCCCEEEEEcCCeEEEE
Confidence            877766 7           888   99 589999999888766553

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.59  E-value=2.2e-13  Score=125.43  Aligned_cols=115  Identities=6%  Similarity=-0.017  Sum_probs=89.7

Q ss_pred             eeccCCcceEEEecC-----cceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------
Q psy10942         10 VIPQITSEFSVHCGR-----DKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------   74 (537)
Q Consensus        10 ~~~~~~~~~l~s~~~-----~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   74 (537)
                      ..|.|+++.++....     ++.|.+.|..+++.+.+++...... +  .++|        ++++++++.          
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-v--a~sp--------DG~~lyVan~~~~r~~~G~  106 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-P--VVAD--------DGSFIAHASTVFSRIARGE  106 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-E--EECT--------TSSCEEEEEEEEEETTEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-E--EECC--------CCCEEEEEcccccccccCC
Confidence            345589988888865     5789999999999999999655443 5  6788        556666654          


Q ss_pred             ccceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEE
Q psy10942         75 EKSLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      .++.|.+||..+++.+.++...        .....++|+|||++|+++..  ++.|.++|..+           .+.+.+
T Consensus       107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t-----------~~vv~t  175 (386)
T 3sjl_D          107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-----------KAFKRM  175 (386)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-----------TEEEEE
T ss_pred             CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC-----------CcEEEE
Confidence            3678999999999888776432        24667999999999988864  68899999999           677777


Q ss_pred             ee
Q psy10942        145 FV  146 (537)
Q Consensus       145 ~~  146 (537)
                      +.
T Consensus       176 I~  177 (386)
T 3sjl_D          176 LD  177 (386)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.59  E-value=1e-13  Score=126.53  Aligned_cols=259  Identities=8%  Similarity=-0.075  Sum_probs=161.4

Q ss_pred             cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942         97 SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~  175 (537)
                      ....+++|+|+|+ +++++..++.|..||..+           .  ...+..+...+.+++++ +++..+++......  
T Consensus        28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-----------~--~~~~~~~~~~~~~l~~~-~dg~l~v~~~~~~~--   91 (296)
T 3e5z_A           28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG-----------Q--LSPEMHPSHHQNGHCLN-KQGHLIACSHGLRR--   91 (296)
T ss_dssp             SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS-----------C--EEEEESSCSSEEEEEEC-TTCCEEEEETTTTE--
T ss_pred             ccccCCeEeCCCCEEEEEeCCCCEEEEEECCC-----------C--eEEEECCCCCcceeeEC-CCCcEEEEecCCCe--
Confidence            4578999999998 777888889999999987           4  45566666778899998 56665443333334  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                        |                 .+||.       .+++.. +........  ...+..+   +++|+|+++++.+..+... 
T Consensus        92 --i-----------------~~~d~-------~~g~~~~~~~~~~~~~--~~~~~~i---~~d~~G~l~vtd~~~g~~~-  139 (296)
T 3e5z_A           92 --L-----------------ERQRE-------PGGEWESIADSFEGKK--LNSPNDV---CLAPDGSLWFSDPTYGIDK-  139 (296)
T ss_dssp             --E-----------------EEECS-------TTCCEEEEECEETTEE--CCCCCCE---EECTTSCEEEEECSHHHHC-
T ss_pred             --E-----------------EEEcC-------CCCcEEEEeeccCCCC--CCCCCCE---EECCCCCEEEECCcccccc-
Confidence              7                 77777       555544 210000011  2345678   8899999888744333322 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       .+.......                          ....+.|..++.. ++.      ..+..+......++|+|+++.
T Consensus       140 -~~~~~~~~~--------------------------~~~~~~l~~~~~~-g~~------~~~~~~~~~~~gi~~s~dg~~  185 (296)
T 3e5z_A          140 -PEEGYGGEM--------------------------ELPGRWVFRLAPD-GTL------SAPIRDRVKPNGLAFLPSGNL  185 (296)
T ss_dssp             -GGGSSCCCC--------------------------CSSSCEEEEECTT-SCE------EEEECCCSSEEEEEECTTSCE
T ss_pred             -ccccccccc--------------------------cCCCcEEEEECCC-CCE------EEeecCCCCCccEEECCCCCE
Confidence             211100000                          0001344555544 221      112234456789999999999


Q ss_pred             EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942        335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG  414 (537)
Q Consensus       335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  414 (537)
                      +++.+.++.|++|++...+......                  +++.           .+..                 .
T Consensus       186 lv~~~~~~~i~~~~~~~~g~~~~~~------------------~~~~-----------~~~~-----------------~  219 (296)
T 3e5z_A          186 LVSDTGDNATHRYCLNARGETEYQG------------------VHFT-----------VEPG-----------------K  219 (296)
T ss_dssp             EEEETTTTEEEEEEECSSSCEEEEE------------------EEEC-----------CSSS-----------------C
T ss_pred             EEEeCCCCeEEEEEECCCCcCcCCC------------------eEee-----------CCCC-----------------C
Confidence            8777778899999986222220000                  0000           0000                 4


Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE-ecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF-INKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      +..++++++|+++++.  ++.|.+||.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-++..+.++
T Consensus       220 p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~  289 (296)
T 3e5z_A          220 TDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL  289 (296)
T ss_dssp             CCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred             CCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence            4568899999877666  7899999986 778888887777 999999 58999999888764 55556655543

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.58  E-value=1e-12  Score=121.41  Aligned_cols=211  Identities=7%  Similarity=-0.000  Sum_probs=148.5

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--  363 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--  363 (537)
                      ..+++...++.|.++|..+++....+     . .......++++++++.+++...++.|.+||+. ..+....+....  
T Consensus        55 ~lyv~~~~~~~v~viD~~t~~~~~~i-----~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~  127 (328)
T 3dsm_A           55 IGWIVVNNSHVIFAIDINTFKEVGRI-----T-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMD  127 (328)
T ss_dssp             EEEEEEGGGTEEEEEETTTCCEEEEE-----E-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCC
T ss_pred             EEEEEEcCCCEEEEEECcccEEEEEc-----C-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCcc
Confidence            46666677899999999998764433     2 23568899999998544444478999999998 566665555332  


Q ss_pred             -----------CCCEEEEEc--CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942        364 -----------KGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS  430 (537)
Q Consensus       364 -----------~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  430 (537)
                                 ++..++++.  .++.|.++|..+++.+..+....                  ....++++|+|+++++.
T Consensus       128 ~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~------------------~p~~i~~~~dG~l~v~~  189 (328)
T 3dsm_A          128 MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI------------------QPTSLVMDKYNKMWTIT  189 (328)
T ss_dssp             TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS------------------CBCCCEECTTSEEEEEB
T ss_pred             ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC------------------CccceEEcCCCCEEEEE
Confidence                       134444444  48899999999998877664332                  34567889999877776


Q ss_pred             eCC----------CcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE--ecCCcc
Q psy10942        431 SGD----------ATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST--FDKHAL  497 (537)
Q Consensus       431 ~~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~--~~~~~~  497 (537)
                      ..+          +.|.++|..+++....+... ......++|+|++++|+++..  .|.+||..+++....  +..+..
T Consensus       190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~  267 (328)
T 3dsm_A          190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDT  267 (328)
T ss_dssp             CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSS
T ss_pred             CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCC
Confidence            654          78999999998887776533 236899999999999988765  899999988875321  111112


Q ss_pred             ceeccCCCCCCccccccceeeecCCCEEEEE-----eCCCCEEeC
Q psy10942        498 KIRNSDSENDHKGFGLPRQLCSRNSDCEYRG-----GWSPQVVVY  537 (537)
Q Consensus       498 ~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~-----~~dg~i~vW  537 (537)
                      ..           ..+   +++|++..|+++     ..++.|.+|
T Consensus       268 ~p-----------~gi---~vdp~~g~lyva~~~~y~~~~~V~v~  298 (328)
T 3dsm_A          268 KY-----------YGL---TVNPNNGEVYVADAIDYQQQGIVYRY  298 (328)
T ss_dssp             CE-----------EEE---EECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred             ce-----------EEE---EEcCCCCeEEEEcccccccCCEEEEE
Confidence            23           677   999955555444     457777765

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.58  E-value=1.3e-13  Score=141.99  Aligned_cols=251  Identities=8%  Similarity=-0.045  Sum_probs=157.3

Q ss_pred             chhhhhhhhcccCCCccEEEeeeccc-cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCc
Q psy10942        148 FSDEILDIALLGEEDSHIVVASNEYL-NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDEL  225 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~  225 (537)
                      |...+..++|| ||+++|+.+..... ....|                 ++||+       .+++.. ..     ..  .
T Consensus       123 ~~~~~~~~~~S-PDg~~la~~~~~~G~~~~~i-----------------~v~d~-------~tg~~~~~~-----~~--~  170 (710)
T 2xdw_A          123 GTVALRGYAFS-EDGEYFAYGLSASGSDWVTI-----------------KFMKV-------DGAKELPDV-----LE--R  170 (710)
T ss_dssp             SCEEEEEEEEC-TTSSEEEEEEEETTCSCEEE-----------------EEEET-------TTTEEEEEE-----EE--E
T ss_pred             CCEEEEEEEEC-CCCCEEEEEEcCCCCceEEE-----------------EEEEC-------CCCCCCccc-----cc--C
Confidence            33357789999 78888887765431 01148                 89998       777665 22     11  2


Q ss_pred             CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                      ..+..+   +|+|||+.|+.++.++.-.  --  .. .  ...                      ......|++|++.++
T Consensus       171 ~~~~~~---~wspDg~~l~~~~~~~~~~--~~--~~-~--~~~----------------------~~~~~~v~~~~l~t~  218 (710)
T 2xdw_A          171 VKFSCM---AWTHDGKGMFYNAYPQQDG--KS--DG-T--ETS----------------------TNLHQKLYYHVLGTD  218 (710)
T ss_dssp             ECSCCE---EECTTSSEEEEEECCCCSS--CC--SS-S--CCC----------------------CCCCCEEEEEETTSC
T ss_pred             cccceE---EEEeCCCEEEEEEECCccc--cc--cc-c--ccc----------------------cCCCCEEEEEECCCC
Confidence            235678   9999999999887665311  00  00 0  000                      011346888898876


Q ss_pred             ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEccC------CceeeEEEEecCCCCEEEEEcCC
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-----DKTVKVWSTTG------GLKLLNVLRGHKKGTQIVSTGAD  374 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~i~d~~~------~~~~~~~~~~~~~~~~l~~~~~d  374 (537)
                      ...... ......|...+..+.|+|||++|+..+.     +..|++||+..      +......+..+..          
T Consensus       219 ~~~~~~-v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~----------  287 (710)
T 2xdw_A          219 QSEDIL-CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE----------  287 (710)
T ss_dssp             GGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS----------
T ss_pred             cccceE-EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC----------
Confidence            531111 1122334566789999999999988764     45677777762      1111222222111          


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC----CcEEEEECCCcee--ee
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD----ATIKLWCLTDYVC--LK  448 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~--~~  448 (537)
                                                             ... ..|+|+|+.|+..+..    +.|.+||+.++..  ..
T Consensus       288 ---------------------------------------~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~  327 (710)
T 2xdw_A          288 ---------------------------------------GEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK  327 (710)
T ss_dssp             ---------------------------------------SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred             ---------------------------------------cEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce
Confidence                                                   111 1366777777666543    3699999987642  34


Q ss_pred             EeecCCc--ceEEEEEecCCCEEEEEeCCCc--EEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942        449 SLEGHDA--SVLRCHFINKGTQIVSTGADGL--LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       449 ~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~--v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  524 (537)
                      .+..|..  .+..+.|++++.++++...|+.  |++|++.+|+.+..+..+...+           ..+   +++|+++.
T Consensus       328 ~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v-----------~~~---~~s~d~~~  393 (710)
T 2xdw_A          328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV-----------VGY---SGQKKDTE  393 (710)
T ss_dssp             EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE-----------EEE---ECCTTCSE
T ss_pred             eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE-----------EEE---ecCCCCCE
Confidence            4554544  6888999988888888888874  6667877888778888777677           777   89999986


Q ss_pred             EEE
Q psy10942        525 EYR  527 (537)
Q Consensus       525 l~s  527 (537)
                      |+.
T Consensus       394 l~~  396 (710)
T 2xdw_A          394 IFY  396 (710)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            663

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.57  E-value=2.6e-13  Score=139.66  Aligned_cols=253  Identities=10%  Similarity=-0.021  Sum_probs=155.9

Q ss_pred             ceEEEEEeccccEEEEEeCCc-----eEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADH-----NISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      .+..++|||||++||.+..++     .|++||+.+           ++.......+ ..+..++|+ ||++.|++++.+.
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t-----------g~~~~~~~~~-~~~~~~~ws-pDg~~l~~~~~~~  192 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-----------AKELPDVLER-VKFSCMAWT-HDGKGMFYNAYPQ  192 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-----------TEEEEEEEEE-ECSCCEEEC-TTSSEEEEEECCC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCcccccC-cccceEEEE-eCCCEEEEEEECC
Confidence            588999999999999876643     899999998           4444322222 236789999 7888887776543


Q ss_pred             cc------------CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCc
Q psy10942        173 LN------------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKT  236 (537)
Q Consensus       173 ~~------------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~  236 (537)
                      ..            ...|                 ++|++       .++...    ..   ...|  ...+..+   .|
T Consensus       193 ~~~~~~~~~~~~~~~~~v-----------------~~~~l-------~t~~~~~~~v~~---~~~~--~~~~~~~---~~  240 (710)
T 2xdw_A          193 QDGKSDGTETSTNLHQKL-----------------YYHVL-------GTDQSEDILCAE---FPDE--PKWMGGA---EL  240 (710)
T ss_dssp             CSSCCSSSCCCCCCCCEE-----------------EEEET-------TSCGGGCEEEEC---CTTC--TTCEEEE---EE
T ss_pred             ccccccccccccCCCCEE-----------------EEEEC-------CCCcccceEEec---cCCC--CeEEEEE---EE
Confidence            20            1124                 66676       544421    12   1134  5567888   89


Q ss_pred             ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC------Cceeee
Q psy10942        237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG------GLKLLN  310 (537)
Q Consensus       237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~------~~~~~~  310 (537)
                      +|||++|+..+.++.-                                        .+..|++||+.+      +...  
T Consensus       241 SpDg~~l~~~~~~~~~----------------------------------------~~~~l~~~d~~~~~~~~~~~~~--  278 (710)
T 2xdw_A          241 SDDGRYVLLSIREGCD----------------------------------------PVNRLWYCDLQQESNGITGILK--  278 (710)
T ss_dssp             CTTSCEEEEEEECSSS----------------------------------------SCCEEEEEEGGGSSSSSCSSCC--
T ss_pred             cCCCCEEEEEEEccCC----------------------------------------CccEEEEEECcccccccCCccc--
Confidence            9999998866532100                                        013455555543      2100  


Q ss_pred             eecccccccCCCeEEEEEcCCCCEEEEEeCCC----cEEEEEccCCce-eeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942        311 VLRGHKKGHEKDINCVTVSPNDKLLASGSLDK----TVKVWSTTGGLK-LLNVLRGHKKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i~i~d~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                        ...+..+...+.. .|+|+|+.|+..+..+    .|.+||+..... ....+..+.+                     
T Consensus       279 --~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---------------------  334 (710)
T 2xdw_A          279 --WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE---------------------  334 (710)
T ss_dssp             --CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---------------------
T ss_pred             --eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC---------------------
Confidence              1112233333433 4788888877765432    466666652210 1111111110                     


Q ss_pred             eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc--EEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT--IKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                               ..                 .+..++|++++.++++...++.  |.+|++.+++.+..+..+.+.+..+.++
T Consensus       335 ---------~~-----------------~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s  388 (710)
T 2xdw_A          335 ---------KD-----------------VLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQ  388 (710)
T ss_dssp             ---------SC-----------------EEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECC
T ss_pred             ---------CC-----------------eEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecC
Confidence                     00                 4556777777788888888874  5667876787778888787788999999


Q ss_pred             cCCCEEEEE-e---CCCcEEEEECCCCe
Q psy10942        464 NKGTQIVST-G---ADGLLKLWSIKTST  487 (537)
Q Consensus       464 ~~~~~l~s~-~---~dg~v~vwd~~~~~  487 (537)
                      |+++.++.. +   ..+.++.||+.+++
T Consensus       389 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          389 KKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             TTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            998766633 2   24789999998877

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.56  E-value=2.7e-12  Score=120.16  Aligned_cols=104  Identities=7%  Similarity=-0.078  Sum_probs=79.4

Q ss_pred             ccCCcceEEEecC--cc---eEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------cc
Q psy10942         12 PQITSEFSVHCGR--DK---VLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------EK   76 (537)
Q Consensus        12 ~~~~~~~l~s~~~--~g---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~   76 (537)
                      |.+++++++....  .+   .|.++|..+++.+.+++..... .+  .++|        ++++++++.          .+
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i--~~sp--------Dg~~lyv~n~~~~~~~rg~~~   96 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NP--VAAH--------SGSEFALASTSFSRIAKGKRT   96 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-Ce--EECC--------CCCEEEEEeccccccccCCCC
Confidence            3478888888764  33   7899999999999998865443 55  6788        667777764          36


Q ss_pred             ceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEeccc
Q psy10942         77 SLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNS  127 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~  127 (537)
                      +.|.+||..+++.+.++...        .....++|+|||++|+++..  ++.|.++| .+
T Consensus        97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t  156 (373)
T 2mad_H           97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG  156 (373)
T ss_pred             CeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence            78999999988777665432        23568999999999998874  47899999 88

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.55  E-value=4.1e-13  Score=124.11  Aligned_cols=287  Identities=6%  Similarity=-0.098  Sum_probs=178.2

Q ss_pred             CcceEEEEEcCccceeeeecc-------ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC
Q psy10942         24 RDKVLFTWDLSSRKQLRSYPA-------YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS   96 (537)
Q Consensus        24 ~~g~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~   96 (537)
                      .++.|.++|.++++....+..       ......+  .+ .        +++++++...++.|.+||..+++.+.++...
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i--~~-~--------~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~   83 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSM--VI-R--------DGIGWIVVNNSHVIFAIDINTFKEVGRITGF   83 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEE--EE-E--------TTEEEEEEGGGTEEEEEETTTCCEEEEEECC
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEE--EE-E--------CCEEEEEEcCCCEEEEEECcccEEEEEcCCC
Confidence            478999999999988775531       1112223  22 2        4456666667899999999999998888766


Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch-----hhhhhhhcccCCCccEEEeeec
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS-----DEILDIALLGEEDSHIVVASNE  171 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~~  171 (537)
                      .....++++++++.+++...++.|.+||..+           .+....+....     .....+++.   ++.++++...
T Consensus        84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-----------~~~~~~i~~g~~~~~~~~p~~i~~~---~~~lyv~~~~  149 (328)
T 3dsm_A           84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-----------YEITGYIECPDMDMESGSTEQMVQY---GKYVYVNCWS  149 (328)
T ss_dssp             SSEEEEEEEETTEEEEEEBSCSEEEEEETTT-----------TEEEEEEECTTCCTTTCBCCCEEEE---TTEEEEEECT
T ss_pred             CCCcEEEEeCCCeEEEEECCCCeEEEEECCC-----------CeEEEEEEcCCccccCCCcceEEEE---CCEEEEEcCC
Confidence            7899999999995554444789999999998           56666665433     135566662   5566565431


Q ss_pred             cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                      .+  +.|                 .++|.       .+++..  +.     .   ......+   +++|+|++++++..+
T Consensus       150 ~~--~~v-----------------~viD~-------~t~~~~~~i~-----~---g~~p~~i---~~~~dG~l~v~~~~~  192 (328)
T 3dsm_A          150 YQ--NRI-----------------LKIDT-------ETDKVVDELT-----I---GIQPTSL---VMDKYNKMWTITDGG  192 (328)
T ss_dssp             TC--CEE-----------------EEEET-------TTTEEEEEEE-----C---SSCBCCC---EECTTSEEEEEBCCB
T ss_pred             CC--CEE-----------------EEEEC-------CCCeEEEEEE-----c---CCCccce---EEcCCCCEEEEECCC
Confidence            11  337                 77887       665544  22     1   1223566   778888766655432


Q ss_pred             CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS  329 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  329 (537)
                      ..-.  .|.                                 ...+.|.++|..+++....+ .   .........++++
T Consensus       193 ~~~~--~~~---------------------------------~~~~~v~~id~~t~~v~~~~-~---~~~g~~p~~la~~  233 (328)
T 3dsm_A          193 YEGS--PYG---------------------------------YEAPSLYRIDAETFTVEKQF-K---FKLGDWPSEVQLN  233 (328)
T ss_dssp             CTTC--SSC---------------------------------BCCCEEEEEETTTTEEEEEE-E---CCTTCCCEEEEEC
T ss_pred             ccCC--ccc---------------------------------cCCceEEEEECCCCeEEEEE-e---cCCCCCceeEEEe
Confidence            1111  110                                 01256778887776543222 0   1112357899999


Q ss_pred             CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942        330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ  409 (537)
Q Consensus       330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  409 (537)
                      |+++.|+++..  .|.+||.. ..+....                              ..+.....             
T Consensus       234 ~d~~~lyv~~~--~v~~~d~~-t~~~~~~------------------------------~~~~~~~~-------------  267 (328)
T 3dsm_A          234 GTRDTLYWINN--DIWRMPVE-ADRVPVR------------------------------PFLEFRDT-------------  267 (328)
T ss_dssp             TTSCEEEEESS--SEEEEETT-CSSCCSS------------------------------CSBCCCSS-------------
T ss_pred             cCCCEEEEEcc--EEEEEECC-CCceeee------------------------------eeecCCCC-------------
Confidence            99999988754  78888876 2221100                              00000000             


Q ss_pred             eEEeeeeEEEEcCC-CCEEEEE----eCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        410 IITGGVWFVNFSPL-DRILISS----SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       410 ~~~~~i~~~~~s~~-~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                          ....++++|+ ++++++.    ..++.|.+||.. ++.+.++..- .....++|-
T Consensus       268 ----~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~~  320 (328)
T 3dsm_A          268 ----KYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCWK  320 (328)
T ss_dssp             ----CEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEEE
T ss_pred             ----ceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceEEEe
Confidence                5677899984 5555555    567899999998 8888888642 234556653

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.55  E-value=1.1e-12  Score=121.87  Aligned_cols=276  Identities=11%  Similarity=0.027  Sum_probs=163.6

Q ss_pred             cEEEEEeCccceEEeeeccceehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         67 KTFVLAGGEKSLLHYYETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        67 ~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      ...++....++.++.|.   ++....+. ....+.+++|+|+|++++++..++.|.+||..+           .+.....
T Consensus        17 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-----------~~~~~~~   82 (333)
T 2dg1_A           17 SNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPF   82 (333)
T ss_dssp             GGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEE
T ss_pred             ccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-----------CcEEEEe
Confidence            34445556677888882   33333333 335679999999999888888889999999987           4444333


Q ss_pred             ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE  224 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~  224 (537)
                      ..+...+.+++++ ++++.+++...+....+.|                 .+||.       .+.... +.  ....+  
T Consensus        83 ~~~~~~~~~i~~~-~dg~l~v~~~~~~~~~~~i-----------------~~~d~-------~~~~~~~~~--~~~~~--  133 (333)
T 2dg1_A           83 VSHKANPAAIKIH-KDGRLFVCYLGDFKSTGGI-----------------FAATE-------NGDNLQDII--EDLST--  133 (333)
T ss_dssp             ECSSSSEEEEEEC-TTSCEEEEECTTSSSCCEE-----------------EEECT-------TSCSCEEEE--CSSSS--
T ss_pred             eCCCCCcceEEEC-CCCcEEEEeCCCCCCCceE-----------------EEEeC-------CCCEEEEEE--ccCcc--
Confidence            3455678999998 5665544433331000126                 67776       554433 11  00023  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ...+..+   +++|+|+++++...+..-        .                               ..+.|..++..+
T Consensus       134 ~~~~~~i---~~d~~g~l~v~~~~~~~~--------~-------------------------------~~~~l~~~~~~~  171 (333)
T 2dg1_A          134 AYCIDDM---VFDSKGGFYFTDFRGYST--------N-------------------------------PLGGVYYVSPDF  171 (333)
T ss_dssp             CCCEEEE---EECTTSCEEEEECCCBTT--------B-------------------------------CCEEEEEECTTS
T ss_pred             CCcccce---EECCCCCEEEEecccccc--------C-------------------------------CCceEEEEeCCC
Confidence            4568888   899999877755432100        0                               011233333332


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                      ++...      +..+...+..++|+|+++.|+.+ ..++.|.+|++......+..+...                     
T Consensus       172 ~~~~~------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~---------------------  224 (333)
T 2dg1_A          172 RTVTP------IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT---------------------  224 (333)
T ss_dssp             CCEEE------EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE---------------------
T ss_pred             CEEEE------eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce---------------------
Confidence            22110      01112346889999999866554 457889999986222222111100                     


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc------ce
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA------SV  457 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v  457 (537)
                         ....+..+.                  .+..++++++|+++++...++.|.+||. +++.+..+..+..      .+
T Consensus       225 ---~~~~~~~~~------------------~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~  282 (333)
T 2dg1_A          225 ---IPYYFTGHE------------------GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS  282 (333)
T ss_dssp             ---EEEECCSSS------------------EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred             ---EEEecCCCC------------------CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc
Confidence               000000000                  4566889999998888878899999998 4666666664433      68


Q ss_pred             EEEEEecCCCEEEEEeCCC
Q psy10942        458 LRCHFINKGTQIVSTGADG  476 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~dg  476 (537)
                      .+++|+||++.|+.++.++
T Consensus       283 ~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          283 THPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             CEEEECTTSCEEEEEEECG
T ss_pred             ceEEECCCCCEEEEEeCcc
Confidence            9999999987777665553

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.53  E-value=4.9e-13  Score=123.20  Aligned_cols=292  Identities=8%  Similarity=-0.053  Sum_probs=175.9

Q ss_pred             CcEEEEEeCc-----cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccC
Q psy10942         66 GKTFVLAGGE-----KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETG  130 (537)
Q Consensus        66 ~~~~~~~~~~-----~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~  130 (537)
                      ++..+++...     ++.|.+.|..+++.+.++....... +++||||++|+++.          .++.|.+||..+   
T Consensus        43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t---  118 (386)
T 3sjl_D           43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---  118 (386)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---
T ss_pred             CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---
Confidence            4444555433     6799999999999988887544344 99999999988876          357899999999   


Q ss_pred             cccccccccceeEEeecch-------hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942        131 LEERPNKILKFRKQFVGFS-------DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE  203 (537)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~  203 (537)
                              .+.+.++.-..       .....++|+ +++++++++.....  +.|                 .++|.   
T Consensus       119 --------~~v~~~I~v~~g~r~~~g~~P~~~a~s-pDGk~lyVan~~~~--~~V-----------------sVID~---  167 (386)
T 3sjl_D          119 --------LLPTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPA--PAV-----------------GVVDL---  167 (386)
T ss_dssp             --------CCEEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSS--CEE-----------------EEEET---
T ss_pred             --------CeEEEEEECCCccccccCCCCceEEEc-CCCCEEEEEEcCCC--CeE-----------------EEEEC---
Confidence                    67777765321       246788999 78888877653222  237                 77788   


Q ss_pred             hhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942        204 AKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT  281 (537)
Q Consensus       204 ~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~  281 (537)
                          .+.+..  +.     -.   + . ..   .+....+.+++.+.||.+.  +.++...                   
T Consensus       168 ----~t~~vv~tI~-----v~---g-~-~~---~~P~g~~~~~~~~~DG~~~--~v~~~~~-------------------  209 (386)
T 3sjl_D          168 ----EGKAFKRMLD-----VP---D-C-YH---IFPTAPDTFFMHCRDGSLA--KVAFGTE-------------------  209 (386)
T ss_dssp             ----TTTEEEEEEE-----CC---S-E-EE---EEEEETTEEEEEETTSCEE--EEECCSS-------------------
T ss_pred             ----CCCcEEEEEE-----CC---C-c-ce---eecCCCceeEEECCCCCEE--EEECCCC-------------------
Confidence                665554  22     11   1 1 11   2222334555666666665  5554431                   


Q ss_pred             CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe-EEEEEc-CCCCEEEEEeCCCcEEEEEccCCc-eeeEE
Q psy10942        282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI-NCVTVS-PNDKLLASGSLDKTVKVWSTTGGL-KLLNV  358 (537)
Q Consensus       282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~  358 (537)
                                   +.+.  +..+.         .+..-..++ ....|. ++|++++ .+.+|.+++.|+.... +....
T Consensus       210 -------------g~v~--~~~~~---------~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~  264 (386)
T 3sjl_D          210 -------------GTPE--ITHTE---------VFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPA  264 (386)
T ss_dssp             -------------SCCE--EEECC---------CCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCC
T ss_pred             -------------CeEE--Eeecc---------eeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecc
Confidence                         1110  00000         000000111 112554 6775555 5567889999886221 11111


Q ss_pred             EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC------
Q psy10942        359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG------  432 (537)
Q Consensus       359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------  432 (537)
                      +.....                     .   ...        ..+.|.       +...++++|+++.++....      
T Consensus       265 ~~~~~~---------------------~---~~~--------~g~~p~-------g~q~~a~~~~~~~lyV~~~~~~~~~  305 (386)
T 3sjl_D          265 VEALTE---------------------A---ERA--------DGWRPG-------GWQQVAYHRALDRIYLLVDQRDEWR  305 (386)
T ss_dssp             EESSCH---------------------H---HHH--------TTEEEC-------SSSCEEEETTTTEEEEEEEECCTTC
T ss_pred             eecccc---------------------c---ccc--------ccccCC-------CcceeeECCCCCeEEEEeccccccc
Confidence            110000                     0   000        001111       3334667888887777643      


Q ss_pred             ----CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEecCC
Q psy10942        433 ----DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       433 ----dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                          .+.|.++|+.+++.+..+..- ..+.++++++|++ +|+++. .++.|.++|..+++.+.++...
T Consensus       306 hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~  373 (386)
T 3sjl_D          306 HKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL  373 (386)
T ss_dssp             TTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred             cCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence                257999999999999888743 4688999999997 666654 5899999999999999988654

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.53  E-value=8.7e-11  Score=109.95  Aligned_cols=77  Identities=5%  Similarity=-0.069  Sum_probs=62.9

Q ss_pred             eeEEEEcCCCCEEEEEeC----------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEE
Q psy10942        415 VWFVNFSPLDRILISSSG----------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWS  482 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd  482 (537)
                      ...++++|+++.+.++..          ++.|.++|+.+++.+.++.. ......++|+|||+ +++++. .++.|.++|
T Consensus       269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD  347 (373)
T 2mad_H          269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence            344678999888777653          35799999999999998864 34579999999999 777777 489999999


Q ss_pred             CCCCeeEEEe
Q psy10942        483 IKTSTCVSTF  492 (537)
Q Consensus       483 ~~~~~~~~~~  492 (537)
                      +.+++.+..+
T Consensus       348 ~~t~~vv~~i  357 (373)
T 2mad_H          348 AGAGDQDQST  357 (373)
T ss_pred             CCCCCEEeee
Confidence            9999998874

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.52  E-value=4e-12  Score=113.86  Aligned_cols=212  Identities=13%  Similarity=0.079  Sum_probs=149.2

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE------
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE-KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV------  358 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------  358 (537)
                      +.+++++.++.|.+||.++++...+.     ..+. ..+.++.++|+|++++  +.++.|..||..  ++.+..      
T Consensus         6 ~~lv~~~~~~~v~~~d~~tG~~~w~~-----~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~--G~~~W~~~~~~~   76 (276)
T 3no2_A            6 HLLVGGSGWNKIAIINKDTKEIVWEY-----PLEKGWECNSVAATKAGEILF--SYSKGAKMITRD--GRELWNIAAPAG   76 (276)
T ss_dssp             EEEEECTTCSEEEEEETTTTEEEEEE-----ECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTT--SCEEEEEECCTT
T ss_pred             cEEEeeCCCCEEEEEECCCCeEEEEe-----CCCccCCCcCeEECCCCCEEE--eCCCCEEEECCC--CCEEEEEcCCCC
Confidence            57899999999999999899875543     2333 4678999999999888  346778877773  223333      


Q ss_pred             -----EEecCCCCEEEEEcC-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        359 -----LRGHKKGTQIVSTGA-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       359 -----~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                           ....++++.+++.+. ++.+..+|. +++.+..+..... +      + +..   .....+++.++|+++++...
T Consensus        77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~------~-~~~---~~~~~v~~~~~G~~lv~~~~  144 (276)
T 3no2_A           77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-I------E-RPH---AQFRQINKNKKGNYLVPLFA  144 (276)
T ss_dssp             CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-C------S-SGG---GSCSCCEECTTSCEEEEETT
T ss_pred             ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-C------C-ccc---ccccCceECCCCCEEEEecC
Confidence                 333456778887776 777777775 5666555532110 0      0 000   03344578899999999999


Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG  512 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  512 (537)
                      ++.|..||.. ++.+.++..+ ..+.++...++++++++++.++.|..+|..+|+.+..+..+...-.     ....+.+
T Consensus       145 ~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~-----~l~~~~~  217 (276)
T 3no2_A          145 TSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV-----QLFFVAQ  217 (276)
T ss_dssp             TTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC-----CCSEEEE
T ss_pred             CCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc-----ccccccc
Confidence            9999999998 9999998865 4566788899999999998888999999999999988864321100     0000145


Q ss_pred             ccceeeecCCCEEEEE
Q psy10942        513 LPRQLCSRNSDCEYRG  528 (537)
Q Consensus       513 ~~~~~~s~~~~~l~s~  528 (537)
                      +   +..++|+.+++.
T Consensus       218 ~---~~~~~G~i~v~~  230 (276)
T 3no2_A          218 L---FPLQNGGLYICN  230 (276)
T ss_dssp             E---EECTTSCEEEEE
T ss_pred             c---eEcCCCCEEEEe
Confidence            5   778888888776

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.52  E-value=7e-13  Score=124.55  Aligned_cols=115  Identities=8%  Similarity=-0.018  Sum_probs=87.4

Q ss_pred             eccCCcceEEEecCc-----ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------c
Q psy10942         11 IPQITSEFSVHCGRD-----KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------E   75 (537)
Q Consensus        11 ~~~~~~~~l~s~~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~   75 (537)
                      .|.++++.++.....     +.|.+.|..+++.+.+++..... .+  .++|        ++++++++.          .
T Consensus        79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gi--a~Sp--------Dgk~lyVan~~~~~~~~G~~  147 (426)
T 3c75_H           79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HP--VAAE--------DGSFFAQASTVFERIARGKR  147 (426)
T ss_dssp             CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EE--EECT--------TSSCEEEEEEEEEETTEEEE
T ss_pred             cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ce--EECC--------CCCEEEEEeccccccccCCC
Confidence            345777777766442     78999999999999999965554 55  6788        556666554          4


Q ss_pred             cceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEe
Q psy10942         76 KSLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      ++.|.++|..+++.+.++...        .....++|+|||++|+++..  ++.|.+.|..+           .+.+.++
T Consensus       148 ~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t-----------~kvv~~I  216 (426)
T 3c75_H          148 TDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG-----------KTFDRML  216 (426)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT-----------TEEEEEE
T ss_pred             CCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC-----------CeEEEEE
Confidence            678999999999888776532        24567899999999998874  57899999999           6767666


Q ss_pred             ec
Q psy10942        146 VG  147 (537)
Q Consensus       146 ~~  147 (537)
                      .-
T Consensus       217 ~v  218 (426)
T 3c75_H          217 DV  218 (426)
T ss_dssp             EC
T ss_pred             Ec
Confidence            53

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.51  E-value=8.8e-14  Score=142.71  Aligned_cols=143  Identities=11%  Similarity=-0.023  Sum_probs=88.5

Q ss_pred             ccCCcceEEEecCc-----ceEEEEEcCccceeeeeccc-----c--ccceeeeEeecCccccccCCcEEEE-----EeC
Q psy10942         12 PQITSEFSVHCGRD-----KVLFTWDLSSRKQLRSYPAY-----E--SLETCAVFHLSDETESKSGGKTFVL-----AGG   74 (537)
Q Consensus        12 ~~~~~~~l~s~~~~-----g~v~iwd~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~   74 (537)
                      |.++|++++-...+     +.|...+...++....+...     +  .+...  .++|        ++++|+     .++
T Consensus        75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~--~~SP--------DG~~la~~~~~~G~  144 (695)
T 2bkl_A           75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTW--AVSW--------DGKKVAFAQKPNAA  144 (695)
T ss_dssp             CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEE--EECT--------TSSEEEEEEEETTC
T ss_pred             CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEE--EECC--------CCCEEEEEECCCCC
Confidence            34678877666432     33444454455433332211     1  23333  6688        556666     334


Q ss_pred             ccceEEeeeccceehh-hhcCCCcceEEEEEeccccEEEEEeCCce-------------EEEEecccccCcccccccccc
Q psy10942         75 EKSLLHYYETSAVKEL-YQHGLSSPLVRIVRSSVKRMYAVVTADHN-------------ISLYRLNSETGLEERPNKILK  140 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~-------------i~iwd~~~~~~~~~~~~~~~~  140 (537)
                      .+..|++||+.+++.+ ...........++|+|||+.|+.++.|..             |++|++.++...       ..
T Consensus       145 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-------~~  217 (695)
T 2bkl_A          145 DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-------DT  217 (695)
T ss_dssp             SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-------CE
T ss_pred             ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-------ce
Confidence            4568999999999875 21111112278999999999999988765             999999874110       12


Q ss_pred             eeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942        141 FRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus       141 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      ++.....|...+..+.|+ +++++|++.+.+.
T Consensus       218 lv~~~~~~~~~~~~~~~S-pDG~~l~~~~~~~  248 (695)
T 2bkl_A          218 VVHERTGDPTTFLQSDLS-RDGKYLFVYILRG  248 (695)
T ss_dssp             EEECCCCCTTCEEEEEEC-TTSCCEEEEEEET
T ss_pred             EEEecCCCCEEEEEEEEC-CCCCEEEEEEeCC
Confidence            333444455667889999 7888888777655

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.49  E-value=4.7e-12  Score=113.71  Aligned_cols=214  Identities=7%  Similarity=-0.084  Sum_probs=141.4

Q ss_pred             EEE-EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------eee
Q psy10942        287 LLA-SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL---------KLL  356 (537)
Q Consensus       287 ~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------~~~  356 (537)
                      +++ +...++.|.+|+..+.....     ....+...+.+++++++++++++.. ++.|.+||.....         ...
T Consensus        37 l~v~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p  110 (270)
T 1rwi_B           37 VYVTSEGMYGRVVKLATGSTGTTV-----LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYP  110 (270)
T ss_dssp             EEEEECSSSCEEEEECC-----EE-----CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSE
T ss_pred             EEEEccCCCCcEEEecCCCcccce-----EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCC
Confidence            444 44667889999876654211     1122334678899999998666655 8899999976321         123


Q ss_pred             EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942        357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI  436 (537)
Q Consensus       357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i  436 (537)
                      ..+...+++..+++...++.|.+|+..+............                 .+..++++|+++++++...++.|
T Consensus       111 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------~p~~i~~~~~g~l~v~~~~~~~i  173 (270)
T 1rwi_B          111 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN-----------------DPDGVAVDNSGNVYVTDTDNNRV  173 (270)
T ss_dssp             EEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC-----------------SCCCEEECTTCCEEEEEGGGTEE
T ss_pred             cceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC-----------------CceeEEEeCCCCEEEEECCCCEE
Confidence            3444455677777777778888887654433221111111                 46778999999977777778899


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccce
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ  516 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  516 (537)
                      .+||............+...+..++++++|.++++...++.|.+|+............+...+           .++   
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p-----------~~i---  239 (270)
T 1rwi_B          174 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP-----------LAV---  239 (270)
T ss_dssp             EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCE-----------EEE---
T ss_pred             EEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCc-----------eeE---
Confidence            999988765544333344668999999999877777778899999986554332222222334           777   


Q ss_pred             eeecCCCEEEEEeCCCCEEeC
Q psy10942        517 LCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       517 ~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      +++++|+++++...++.|+++
T Consensus       240 ~~~~~g~l~v~~~~~~~v~~~  260 (270)
T 1rwi_B          240 AVDSDRTVYVADRGNDRVVKL  260 (270)
T ss_dssp             EECTTCCEEEEEGGGTEEEEE
T ss_pred             EECCCCCEEEEECCCCEEEEE
Confidence            999999988888889998874

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.48  E-value=2.4e-10  Score=104.21  Aligned_cols=262  Identities=6%  Similarity=-0.077  Sum_probs=166.6

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc--ccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF--VPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                      ...+.++   ++.++|+.+++...++.+.  .|+.. +........  ......+......  ..+++...++.|..|+.
T Consensus        14 ~~~~~~i---~~d~~g~l~v~~~~~~~v~--~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~   85 (299)
T 2z2n_A           14 DTGPYGI---TVSDKGKVWITQHKANMIS--CINLD-GKITEYPLPTPDAKVMCLTISSDG--EVWFTENAANKIGRITK   85 (299)
T ss_dssp             SCCEEEE---EECTTSCEEEEETTTTEEE--EECTT-CCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT
T ss_pred             CCCccce---EECCCCCEEEEecCCCcEE--EEcCC-CCeEEecCCcccCceeeEEECCCC--CEEEeCCCCCeEEEECC
Confidence            5778999   9999999888777678888  89877 321111100  0001111111111  35555556788999998


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce----------eeEEEEecCCCCEEEEEc
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK----------LLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----------~~~~~~~~~~~~~l~~~~  372 (537)
                      .....  ..   ........+.+++++|+++++++...++.|..||.. ...          ....+...+++..+++..
T Consensus        86 ~g~~~--~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~  159 (299)
T 2z2n_A           86 KGIIK--EY---TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGSDNALWFTEN  159 (299)
T ss_dssp             TSCEE--EE---ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred             CCcEE--EE---eCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence            63321  11   112244578999999999888877778889999874 221          123334445566777666


Q ss_pred             CCCcEEEEECCCCeeeee-eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-e
Q psy10942        373 ADGLLKLWSIKTSTCVST-FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-L  450 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~  450 (537)
                      .++.|..||. +++.... ......                 .+..++++++++++++...++.|..||. +++.... +
T Consensus       160 ~~~~i~~~~~-~g~~~~~~~~~~~~-----------------~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~  220 (299)
T 2z2n_A          160 QNNAIGRITE-SGDITEFKIPTPAS-----------------GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI  220 (299)
T ss_dssp             TTTEEEEECT-TCCEEEEECSSTTC-----------------CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred             CCCEEEEEcC-CCcEEEeeCCCCCC-----------------cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC
Confidence            6788888887 5543321 111111                 5678899999997777666789999998 6554322 2


Q ss_pred             ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       451 ~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      ..+...+.+++++++|+++++...++.|..||. +++.... +..+...+           .++   ++ ++++++++..
T Consensus       221 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~-----------~~i---~~-~~g~l~v~~~  284 (299)
T 2z2n_A          221 PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEP-----------HGI---CF-DGETIWFAME  284 (299)
T ss_dssp             SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCE-----------EEE---EE-CSSCEEEEET
T ss_pred             CCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCcc-----------ceE---Ee-cCCCEEEEec
Confidence            334567899999999987777667889999998 5553322 22333445           777   88 8888877765


Q ss_pred             CCCCEE
Q psy10942        530 WSPQVV  535 (537)
Q Consensus       530 ~dg~i~  535 (537)
                      .++.++
T Consensus       285 ~~~l~~  290 (299)
T 2z2n_A          285 CDKIGK  290 (299)
T ss_dssp             TTEEEE
T ss_pred             CCcEEE
Confidence            444443

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.48  E-value=8.8e-13  Score=135.30  Aligned_cols=279  Identities=13%  Similarity=0.011  Sum_probs=164.4

Q ss_pred             eccccEEEEEeCCc---eEEEEecccccCcccccccccceeEEe------ecchhhhhhhhcccCCCccEEEeeecc-cc
Q psy10942        105 SSVKRMYAVVTADH---NISLYRLNSETGLEERPNKILKFRKQF------VGFSDEILDIALLGEEDSHIVVASNEY-LN  174 (537)
Q Consensus       105 s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~  174 (537)
                      +|+|++++....++   .-.+|......         .+....+      .+|...+..++|| ||+++|+.+.... ..
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~l~d~~~~a~~~~~~~~~~~~S-PDG~~la~~~~~~G~~  145 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGES---------GQEKVLLDPNGWSKDGTVSLGTWAVS-WDGKKVAFAQKPNAAD  145 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTT---------SCCEEEECGGGSSSSSCEEEEEEEEC-TTSSEEEEEEEETTCS
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCC---------CCcEEEEchHHhccCCCEEEEEEEEC-CCCCEEEEEECCCCCc
Confidence            58999988877644   34556554310         2222122      1344468889999 7888887655432 11


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeE--EEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTV--TLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v--~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                      ...|                 ++||+       .+++....     .+  ...+  ..+   +|+|||+.|+.++.|..-
T Consensus       146 ~~~i-----------------~v~dl-------~tg~~~~~-----~~--~~~~~~~~~---~wspDg~~l~~~~~d~~~  191 (695)
T 2bkl_A          146 EAVL-----------------HVIDV-------DSGEWSKV-----DV--IEGGKYATP---KWTPDSKGFYYEWLPTDP  191 (695)
T ss_dssp             CCEE-----------------EEEET-------TTCCBCSS-----CC--BSCCTTCCC---EECTTSSEEEEEECCCCT
T ss_pred             eEEE-----------------EEEEC-------CCCCCcCC-----cc--cCcccccce---EEecCCCEEEEEEecCCC
Confidence            2348                 89998       77665412     22  2222  577   899999999988776431


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      .  --....                              .....|++|++.++.....+ ......+...+..+.|+|||
T Consensus       192 ~--~~~~~~------------------------------~~~~~v~~~~l~t~~~~~~l-v~~~~~~~~~~~~~~~SpDG  238 (695)
T 2bkl_A          192 S--IKVDER------------------------------PGYTTIRYHTLGTEPSKDTV-VHERTGDPTTFLQSDLSRDG  238 (695)
T ss_dssp             T--SCGGGG------------------------------GGGCEEEEEETTSCGGGCEE-EECCCCCTTCEEEEEECTTS
T ss_pred             C--CccccC------------------------------CCCCEEEEEECCCCchhceE-EEecCCCCEEEEEEEECCCC
Confidence            1  000000                              01246888888776531111 22233455678899999999


Q ss_pred             CEEEEEeCCC----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942        333 KLLASGSLDK----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       333 ~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      ++|+..+.++    .|++++.. .. ....+..+..                                            
T Consensus       239 ~~l~~~~~~~~~~~~l~~~~~~-~~-~~~~l~~~~~--------------------------------------------  272 (695)
T 2bkl_A          239 KYLFVYILRGWSENDVYWKRPG-EK-DFRLLVKGVG--------------------------------------------  272 (695)
T ss_dssp             CCEEEEEEETTTEEEEEEECTT-CS-SCEEEEECSS--------------------------------------------
T ss_pred             CEEEEEEeCCCCceEEEEEcCC-CC-ceEEeecCCC--------------------------------------------
Confidence            9998877655    45555433 11 1222222211                                            


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEe---CCCcEEEEECCCcee--eeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        409 QIITGGVWFVNFSPLDRILISSS---GDATIKLWCLTDYVC--LKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                           ......+ ++|++++...   .++.|.+||+.+++.  ...+..+  ...+..++|+ ++.++++...|+..++|
T Consensus       273 -----~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~  345 (695)
T 2bkl_A          273 -----AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR  345 (695)
T ss_dssp             -----CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred             -----ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence                 1222233 4455333333   257899999987653  2333333  4457888998 67788888899988887


Q ss_pred             ECC-CCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        482 SIK-TSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       482 d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      .+. +++....+..+ ...+           ..+   +++|+++.|+.
T Consensus       346 ~~~~~g~~~~~l~~~~~~~v-----------~~~---~~s~d~~~l~~  379 (695)
T 2bkl_A          346 VATLKGKPVRTVQLPGVGAA-----------SNL---MGLEDLDDAYY  379 (695)
T ss_dssp             EEETTCCEEEECCCSSSSEE-----------CCC---BSCTTCSEEEE
T ss_pred             EEeCCCCeeEEecCCCCeEE-----------EEe---ecCCCCCEEEE
Confidence            654 46666666655 5566           777   89999987763

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.44  E-value=5.8e-12  Score=130.13  Aligned_cols=253  Identities=13%  Similarity=-0.049  Sum_probs=146.3

Q ss_pred             ceEEEEEeccccEEEEEeCC-----ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942         98 PLVRIVRSSVKRMYAVVTAD-----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      .+..++|||||++||.+..+     ..|++||+.+           ++.+.. ..+...+..++|+ ++ +.|+++..+.
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t-----------g~~~~~-~~~~~~~~~~~ws-pD-~~l~~~~~~~  229 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD-----------GKPLAD-ELKWVKFSGLAWL-GN-DALLYSRFAE  229 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT-----------CCEEEE-EEEEEESCCCEES-TT-SEEEEEECCC
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCCc-cCCCceeccEEEE-CC-CEEEEEEecC
Confidence            68899999999999987754     4699999998           444332 2222234689999 66 7777766543


Q ss_pred             cc----------CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc---c-ccccccccCCCcCeEEEEeccCccc
Q psy10942        173 LN----------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ---Q-KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       173 ~~----------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~---~-l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      ..          ...|                 ++|++       .+...   . +.   ...+  ...+..+   .|+|
T Consensus       230 ~~~~~~~~~~~~~~~v-----------------~~~~l-------gt~~~~~~lv~~---~~~~--~~~~~~~---~~Sp  277 (741)
T 1yr2_A          230 PKEGQAFQALNYNQTV-----------------WLHRL-------GTPQSADQPVFA---TPEL--PKRGHGA---SVSS  277 (741)
T ss_dssp             C--------CCCCCEE-----------------EEEET-------TSCGGGCEEEEC---CTTC--TTCEEEE---EECT
T ss_pred             cccccccccCCCCCEE-----------------EEEEC-------CCCchhCEEEec---cCCC--CeEEEEE---EECC
Confidence            20          1124                 55565       44332   1 22   0123  3457888   8999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee-eeeeccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL-LNVLRGHKK  317 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~  317 (537)
                      ||++|+..+.++.      +                                  ....|++||+.++... ..    .+.
T Consensus       278 DG~~l~~~~~~~~------~----------------------------------~~~~l~~~d~~~~~~~~~~----~l~  313 (741)
T 1yr2_A          278 DGRWVVITSSEGT------D----------------------------------PVNTVHVARVTNGKIGPVT----ALI  313 (741)
T ss_dssp             TSCEEEEEEECTT------C----------------------------------SCCEEEEEEEETTEECCCE----EEE
T ss_pred             CCCEEEEEEEccC------C----------------------------------CcceEEEEECCCCCCcccE----Eec
Confidence            9998886654320      0                                  0124555665544110 00    111


Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCC-ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGG-LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      .+...+... ++|+|+.|+..+.+    +.|.+||+... ......+ .+                              
T Consensus       314 ~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~------------------------------  361 (741)
T 1yr2_A          314 PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PE------------------------------  361 (741)
T ss_dssp             CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CC------------------------------
T ss_pred             CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cC------------------------------
Confidence            222233333 34888888877654    34777776521 1111111 11                              


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeec-CCcceEEEEEecCCCEEE
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEG-HDASVLRCHFINKGTQIV  470 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~  470 (537)
                       +..                 .+..++++ ++.++++...|+..++|.+. +++....+.. +.+.+..+.++|+++.|+
T Consensus       362 -~~~-----------------~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~  422 (741)
T 1yr2_A          362 -SKD-----------------NLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAY  422 (741)
T ss_dssp             -CSS-----------------EEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred             -CCC-----------------eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence             111                 23344555 45677888888887777544 3555566654 356788999999987665


Q ss_pred             EE-e---CCCcEEEEECCCCeeEEEe
Q psy10942        471 ST-G---ADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       471 s~-~---~dg~v~vwd~~~~~~~~~~  492 (537)
                      .. +   ..++|++||+.+++. ..+
T Consensus       423 ~~~ss~~~P~~i~~~d~~tg~~-~~l  447 (741)
T 1yr2_A          423 LSFSSFTQPATVLALDPATAKT-TPW  447 (741)
T ss_dssp             EEEEETTEEEEEEEEETTTTEE-EEC
T ss_pred             EEEcCCCCCCEEEEEECCCCcE-EEE
Confidence            33 2   247899999988873 344

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.43  E-value=6.1e-12  Score=118.21  Aligned_cols=278  Identities=8%  Similarity=-0.049  Sum_probs=171.3

Q ss_pred             ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccCcccccccccceeEEee
Q psy10942         77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      +.|.++|+.+++.+.++.....- .+++||||++|+++.          .++.|.++|..+           .+.+.++.
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t-----------~~vv~~I~  166 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT-----------FLPIADIE  166 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-----------CCEEEEEE
T ss_pred             CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-----------CcEEEEEE
Confidence            79999999999999888855444 899999999988876          367899999999           67777665


Q ss_pred             cc-------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc
Q psy10942        147 GF-------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT  217 (537)
Q Consensus       147 ~~-------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~  217 (537)
                      -.       ......++|+ +++++++++.....  +.|                 .+.|.       .+.+..  +.  
T Consensus       167 v~g~~r~~~g~~P~~~~~s-pDGk~lyV~n~~~~--~~V-----------------sVID~-------~t~kvv~~I~--  217 (426)
T 3c75_H          167 LPDAPRFLVGTYQWMNALT-PDNKNLLFYQFSPA--PAV-----------------GVVDL-------EGKTFDRMLD--  217 (426)
T ss_dssp             ETTCCCCCBSCCGGGSEEC-TTSSEEEEEECSSS--CEE-----------------EEEET-------TTTEEEEEEE--
T ss_pred             CCCccccccCCCcceEEEc-CCCCEEEEEecCCC--CeE-----------------EEEEC-------CCCeEEEEEE--
Confidence            32       2346788999 78888877653222  226                 66677       555443  22  


Q ss_pred             ccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                         -.   +.   .   ...|++ +.+++.+.||.+.  +.+...+..                       ....    +
T Consensus       218 ---v~---g~---~---~~~p~g~~~~v~~~~dG~~~--~V~~~~~~v-----------------------~~~~----~  256 (426)
T 3c75_H          218 ---VP---DC---Y---HIFPASPTVFYMNCRDGSLA--RVDFADGET-----------------------KVTN----T  256 (426)
T ss_dssp             ---CC---SE---E---EEEEEETTEEEEEETTSSEE--EEECCTTCC-----------------------EEEE----C
T ss_pred             ---cC---Cc---e---eeccCCCcEEEEEcCCCCEE--EEECCCCcE-----------------------EEEe----e
Confidence               10   10   1   122332 3344444455544  334321100                       0000    0


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCCEEEEEcCCC
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d~  375 (537)
                       .+++.....               ....+.+.++++.++.....+.+.+.|+...... +..+                
T Consensus       257 -~~~~v~~~p---------------~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~----------------  304 (426)
T 3c75_H          257 -EVFHTEDEL---------------LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPI----------------  304 (426)
T ss_dssp             -CCCSCTTSC---------------BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCE----------------
T ss_pred             -eeeccCCCc---------------eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeee----------------
Confidence             111111110               0113567888888877778888988888622111 0000                


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC----------CCcEEEEECCCce
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG----------DATIKLWCLTDYV  445 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~  445 (537)
                           .+.....+.           ..+.|.       +...++++|+++.+++...          ++.|.++|+.+.+
T Consensus       305 -----~~~~~~~i~-----------~g~~p~-------g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k  361 (426)
T 3c75_H          305 -----EALTEAERA-----------DDWRPG-------GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE  361 (426)
T ss_dssp             -----ESSCTTTGG-----------GTEEEC-------SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred             -----eeccccccc-----------cccccC-------CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence                 100000000           000111       2233678888877776642          3579999999999


Q ss_pred             eeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEe
Q psy10942        446 CLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       446 ~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~  492 (537)
                      .+.++... .....+.|+||++ +++++. .++.|.++|+.+++.++++
T Consensus       362 vv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          362 RINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            99988743 3478999999999 888888 5899999999999999887

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.43  E-value=2.2e-12  Score=115.95  Aligned_cols=240  Identities=8%  Similarity=-0.044  Sum_probs=151.1

Q ss_pred             ceEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         98 PLVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        98 ~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ...+++++++|++++ +.+.++.|.+||..+           .........+...+.++++. +++. ++++..++.   
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~p~~i~~~-~~g~-l~v~~~~~~---   88 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGS-----------TGTTVLPFNGLYQPQGLAVD-GAGT-VYVTDFNNR---   88 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC----------------EECCCCSCCSCCCEEEC-TTCC-EEEEETTTE---
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCC-----------cccceEeeCCcCCcceeEEC-CCCC-EEEEcCCCE---
Confidence            788999999998766 446778899999766           22211112233457889998 5555 555543333   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       |                 .+||.       ...... +.    ...  ...+..+   +++++|+.+++...++.|.  
T Consensus        89 -i-----------------~~~d~-------~~~~~~~~~----~~~--~~~p~~i---~~~~~g~l~v~~~~~~~i~--  132 (270)
T 1rwi_B           89 -V-----------------VTLAA-------GSNNQTVLP----FDG--LNYPEGL---AVDTQGAVYVADRGNNRVV--  132 (270)
T ss_dssp             -E-----------------EEECT-------TCSCCEECC----CCS--CSSEEEE---EECTTCCEEEEEGGGTEEE--
T ss_pred             -E-----------------EEEeC-------CCceEeeee----cCC--cCCCcce---EECCCCCEEEEECCCCEEE--
Confidence             7                 66776       443333 22    022  3567888   8888888777666566666  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                      +|+....                                           ....     ........+.+++++|+|+++
T Consensus       133 ~~~~~~~-------------------------------------------~~~~-----~~~~~~~~p~~i~~~~~g~l~  164 (270)
T 1rwi_B          133 KLAAGSK-------------------------------------------TQTV-----LPFTGLNDPDGVAVDNSGNVY  164 (270)
T ss_dssp             EECTTCC-------------------------------------------SCEE-----CCCCSCCSCCCEEECTTCCEE
T ss_pred             EEECCCc-------------------------------------------eeEe-----eccccCCCceeEEEeCCCCEE
Confidence            6643221                                           0000     000112345778999999877


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      ++...++.|.+||.. .......                                ......                 .+
T Consensus       165 v~~~~~~~i~~~~~~-~~~~~~~--------------------------------~~~~~~-----------------~p  194 (270)
T 1rwi_B          165 VTDTDNNRVVKLEAE-SNNQVVL--------------------------------PFTDIT-----------------AP  194 (270)
T ss_dssp             EEEGGGTEEEEECTT-TCCEEEC--------------------------------CCSSCC-----------------SE
T ss_pred             EEECCCCEEEEEecC-CCceEee--------------------------------cccCCC-----------------Cc
Confidence            776667888888876 2211100                                000000                 56


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      ..++++++|.++++...++.|.+|+............+...+.+++++++|+++++...++.|+++++...+
T Consensus       195 ~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          195 WGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             EEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             eEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            788999999877777778899999987654333222334568999999999988888889999999986554

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.43  E-value=5.6e-12  Score=130.26  Aligned_cols=283  Identities=11%  Similarity=-0.052  Sum_probs=162.7

Q ss_pred             eccccEEEEEeCCce---EEEEecccccCcccccccccceeEE------eecchhhhhhhhcccCCCccEEEeeeccc-c
Q psy10942        105 SSVKRMYAVVTADHN---ISLYRLNSETGLEERPNKILKFRKQ------FVGFSDEILDIALLGEEDSHIVVASNEYL-N  174 (537)
Q Consensus       105 s~~~~~la~~~~d~~---i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~~~~~~~~-~  174 (537)
                      +|||++++....++.   -.+|.......    .  ..+....      -.+|...+..++|| ||+++|+.+..... .
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~----~--~~~~~~lld~~~l~~~~~~~~~~~~~S-PDG~~la~~~~~~G~e  187 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAP----V--GTKGRVLLDPNTWAKDGATALDAWAAS-DDGRLLAYSVQDGGSD  187 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSC----T--TCCCEEEECGGGCC----EEEEEEEEC-TTSSEEEEEEEETTCS
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCcc----C--CCCCEEEECHHHhccCCCEEEEeEEEC-CCCCEEEEEEcCCCCc
Confidence            599999887765443   56666543100    0  0111111      12233357789999 78888887765421 1


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                      ...|                 ++||+       .+++.. ..     .+  ...+..+   +|+|| +.|+.++.++...
T Consensus       188 ~~~i-----------------~v~dl-------~tg~~~~~~-----~~--~~~~~~~---~wspD-~~l~~~~~~~~~~  232 (741)
T 1yr2_A          188 WRTV-----------------KFVGV-------ADGKPLADE-----LK--WVKFSGL---AWLGN-DALLYSRFAEPKE  232 (741)
T ss_dssp             EEEE-----------------EEEET-------TTCCEEEEE-----EE--EEESCCC---EESTT-SEEEEEECCCC--
T ss_pred             eEEE-----------------EEEEC-------CCCCCCCcc-----CC--CceeccE---EEECC-CEEEEEEecCccc
Confidence            1237                 88998       777654 22     12  2223567   89999 9998877665321


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        -   ..                          +........|++|++.++...... ......+...+..+.|+|||+
T Consensus       233 --~---~~--------------------------~~~~~~~~~v~~~~lgt~~~~~~l-v~~~~~~~~~~~~~~~SpDG~  280 (741)
T 1yr2_A          233 --G---QA--------------------------FQALNYNQTVWLHRLGTPQSADQP-VFATPELPKRGHGASVSSDGR  280 (741)
T ss_dssp             -------------------------------------CCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSC
T ss_pred             --c---cc--------------------------cccCCCCCEEEEEECCCCchhCEE-EeccCCCCeEEEEEEECCCCC
Confidence              0   00                          000011346788888766521111 112223334588999999999


Q ss_pred             EEEEEeCCC-----cEEEEEccCCcee-eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        334 LLASGSLDK-----TVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       334 ~l~~~~~d~-----~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      +|+..+.++     .|++||+..+... ...+..+.+                                           
T Consensus       281 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-------------------------------------------  317 (741)
T 1yr2_A          281 WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-------------------------------------------  317 (741)
T ss_dssp             EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-------------------------------------------
T ss_pred             EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-------------------------------------------
Confidence            988877543     6777777622111 222222111                                           


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeC----CCcEEEEECCCc--eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSG----DATIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                            ..... ++|+|+.|+..+.    ++.|.+||+.++  +....+..+...+..+.|+ ++.++++...|+..+||
T Consensus       318 ------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~  389 (741)
T 1yr2_A          318 ------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVL  389 (741)
T ss_dssp             ------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEE
T ss_pred             ------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence                  11112 2367777777665    345999999874  3444444455556778887 55678888889887777


Q ss_pred             ECC-CCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942        482 SIK-TSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEY  526 (537)
Q Consensus       482 d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~  526 (537)
                      .+. +++....+..+ ...+           ..+   +++|+++.|+
T Consensus       390 ~~~~~g~~~~~l~~~~~~~v-----------~~~---~~s~d~~~l~  422 (741)
T 1yr2_A          390 AFDLDGKPAGAVSLPGIGSA-----------SGL---SGRPGDRHAY  422 (741)
T ss_dssp             EEETTSCEEEECBCSSSCEE-----------EEE---ECCBTCSCEE
T ss_pred             EEeCCCCceeeccCCCCeEE-----------EEe---ecCCCCCEEE
Confidence            554 46666666543 4556           667   8999988666

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.42  E-value=1.2e-10  Score=106.21  Aligned_cols=279  Identities=6%  Similarity=-0.035  Sum_probs=164.7

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ..+.+++++++|+++++...++.|..||...           ......+..+...+.++++. +++...++....+.   
T Consensus        15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~---   79 (299)
T 2z2n_A           15 TGPYGITVSDKGKVWITQHKANMISCINLDG-----------KITEYPLPTPDAKVMCLTIS-SDGEVWFTENAANK---   79 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC-----------CEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTE---
T ss_pred             CCccceEECCCCCEEEEecCCCcEEEEcCCC-----------CeEEecCCcccCceeeEEEC-CCCCEEEeCCCCCe---
Confidence            5799999999998777666578899999773           21111222234557888888 55554433222333   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       |                 ..||.       . ++.. +.   ....  ...+..+   ++.++|+++++...++.+.  
T Consensus        80 -i-----------------~~~~~-------~-g~~~~~~---~~~~--~~~~~~i---~~~~~g~l~v~~~~~~~i~--  123 (299)
T 2z2n_A           80 -I-----------------GRITK-------K-GIIKEYT---LPNP--DSAPYGI---TEGPNGDIWFTEMNGNRIG--  123 (299)
T ss_dssp             -E-----------------EEECT-------T-SCEEEEE---CSST--TCCEEEE---EECTTSCEEEEETTTTEEE--
T ss_pred             -E-----------------EEECC-------C-CcEEEEe---CCCc--CCCceee---EECCCCCEEEEecCCceEE--
Confidence             6                 55665       3 2211 11   0134  5578889   8999998888877778888  


Q ss_pred             cccccCCCccccccc--ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        256 LEKRKTYHFPLFGIF--VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       256 iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                      .|+. .+........  ......+......  ..+++...++.|..||. +++... .   ........+.+++++++++
T Consensus       124 ~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~---~~~~~~~~~~~i~~~~~g~  195 (299)
T 2z2n_A          124 RITD-DGKIREYELPNKGSYPSFITLGSDN--ALWFTENQNNAIGRITE-SGDITE-F---KIPTPASGPVGITKGNDDA  195 (299)
T ss_dssp             EECT-TCCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT-TCCEEE-E---ECSSTTCCEEEEEECTTSS
T ss_pred             EECC-CCCEEEecCCCCCCCCceEEEcCCC--CEEEEeCCCCEEEEEcC-CCcEEE-e---eCCCCCCcceeEEECCCCC
Confidence            8887 3221111000  0001111111111  35555556788999988 444321 1   1223345678899999988


Q ss_pred             EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      ++++...++.|.+||.. .. . ..+...                              ....                 
T Consensus       196 l~v~~~~~~~i~~~~~~-g~-~-~~~~~~------------------------------~~~~-----------------  225 (299)
T 2z2n_A          196 LWFVEIIGNKIGRITTS-GE-I-TEFKIP------------------------------TPNA-----------------  225 (299)
T ss_dssp             EEEEETTTTEEEEECTT-CC-E-EEEECS------------------------------STTC-----------------
T ss_pred             EEEEccCCceEEEECCC-Cc-E-EEEECC------------------------------CCCC-----------------
Confidence            76666567778888773 22 1 111100                              0001                 


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      .+.+++++++|+++++...++.|..||. +++.... +..+...+.++++ +++.++++.. .+.+..++.++++
T Consensus       226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          226 RPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             CEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             CceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence            5778899999987776657789999998 4443221 2344567899999 8888777655 5667777776543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.38  E-value=3.2e-10  Score=101.45  Aligned_cols=225  Identities=14%  Similarity=0.099  Sum_probs=156.9

Q ss_pred             CCCeeeeccCCCcceeccccccCCCccccccccc--ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP--EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      .++.|++++.++.|.  +||..+++.........  .........+.  +.++  +.++.|..||. +++.+...     
T Consensus         4 ~~~~lv~~~~~~~v~--~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG--~ilv--s~~~~V~~~d~-~G~~~W~~-----   71 (276)
T 3no2_A            4 PQHLLVGGSGWNKIA--IINKDTKEIVWEYPLEKGWECNSVAATKAG--EILF--SYSKGAKMITR-DGRELWNI-----   71 (276)
T ss_dssp             CCEEEEECTTCSEEE--EEETTTTEEEEEEECCTTCCCCEEEECTTS--CEEE--ECBSEEEEECT-TSCEEEEE-----
T ss_pred             CCcEEEeeCCCCEEE--EEECCCCeEEEEeCCCccCCCcCeEECCCC--CEEE--eCCCCEEEECC-CCCEEEEE-----
Confidence            457899999999999  99987754332221110  01111111111  4555  45788999999 66654433     


Q ss_pred             ccc-CCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceeeEEEEe----------------cCCCCEEEEEcCCCcEE
Q psy10942        317 KGH-EKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLLNVLRG----------------HKKGTQIVSTGADGLLK  378 (537)
Q Consensus       317 ~~~-~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~----------------~~~~~~l~~~~~d~~i~  378 (537)
                      ..+ ...+.++.+.|+|+.+++.+. ++.+..+|..  ++.+..+..                .++++++++...++.|.
T Consensus        72 ~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~  149 (276)
T 3no2_A           72 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR  149 (276)
T ss_dssp             ECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred             cCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEE
Confidence            222 346888999999999999887 6777777654  444444431                24588999999999999


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC----
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD----  454 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----  454 (537)
                      .||.. ++.+.++....                  ...++.+.+++++++++..++.|..+|..+++.+.++..+.    
T Consensus       150 ~~d~~-G~~~w~~~~~~------------------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~  210 (276)
T 3no2_A          150 EIAPN-GQLLNSVKLSG------------------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV  210 (276)
T ss_dssp             EECTT-SCEEEEEECSS------------------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC
T ss_pred             EECCC-CCEEEEEECCC------------------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc
Confidence            99998 99888886643                  44556778899999998888899999999999999987432    


Q ss_pred             --cceEEEEEecCCCEEEEEeCC--------CcEEEEEC-CCCeeEEEecCCc
Q psy10942        455 --ASVLRCHFINKGTQIVSTGAD--------GLLKLWSI-KTSTCVSTFDKHA  496 (537)
Q Consensus       455 --~~v~~~~~s~~~~~l~s~~~d--------g~v~vwd~-~~~~~~~~~~~~~  496 (537)
                        ..+..+...++|.++++....        +..+++++ .+|+.+..+..+.
T Consensus       211 ~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~  263 (276)
T 3no2_A          211 QLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKV  263 (276)
T ss_dssp             CCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred             cccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcc
Confidence              227888889999988887421        23456666 5788888886544

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.36  E-value=1.7e-10  Score=106.10  Aligned_cols=210  Identities=10%  Similarity=-0.005  Sum_probs=131.6

Q ss_pred             EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCcee--------------
Q psy10942        291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKL--------------  355 (537)
Q Consensus       291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~--------------  355 (537)
                      +..++.|..||..+++..... .....++...+.+++++++ ++++++. ..+.|.+||.. ....              
T Consensus        42 ~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~  118 (314)
T 1pjx_A           42 GKPAGEILRIDLKTGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQG  118 (314)
T ss_dssp             TEECCEEEEECTTTCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred             CCCCCEEEEEeCCCCcEEEEE-ecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccC
Confidence            456789999998776542111 1111124467899999999 6655544 44578889876 2211              


Q ss_pred             eEEEEecCCCCEEEEEcCC---------------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE
Q psy10942        356 LNVLRGHKKGTQIVSTGAD---------------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF  420 (537)
Q Consensus       356 ~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~  420 (537)
                      ...+...+++.++++...+               +.|..+|.. ++...... +                 ......+++
T Consensus       119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~-----------------~~~~~~i~~  179 (314)
T 1pjx_A          119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-A-----------------FQFPNGIAV  179 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-E-----------------ESSEEEEEE
T ss_pred             CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-C-----------------CCCcceEEE
Confidence            1223333445555554433               345555543 32211110 0                 014567888


Q ss_pred             c----CCCCEEEEE-eCCCcEEEEECC-Cce-----eeeEeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        421 S----PLDRILISS-SGDATIKLWCLT-DYV-----CLKSLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       421 s----~~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      +    |+++.++.+ ..++.|.+||.. +++     ....+..+. ..+..++++++|+++++...++.|.+||.++++.
T Consensus       180 ~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~  259 (314)
T 1pjx_A          180 RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP  259 (314)
T ss_dssp             EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred             ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE
Confidence            9    999766555 467899999976 443     223333343 5678899999999888888889999999987877


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE-eCCCCEEe
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG-GWSPQVVV  536 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~-~~dg~i~v  536 (537)
                      +..+..+...+           .++   +|+|+++.|+.+ ..++.|..
T Consensus       260 ~~~~~~~~~~~-----------~~i---~~~~dg~~l~v~~~~~~~l~~  294 (314)
T 1pjx_A          260 KMRIRCPFEKP-----------SNL---HFKPQTKTIFVTEHENNAVWK  294 (314)
T ss_dssp             SEEEECSSSCE-----------EEE---EECTTSSEEEEEETTTTEEEE
T ss_pred             eEEEeCCCCCc-----------eeE---EECCCCCEEEEEeCCCCeEEE
Confidence            77776665566           788   999999966554 44556654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.35  E-value=5.9e-10  Score=101.37  Aligned_cols=219  Identities=11%  Similarity=0.010  Sum_probs=130.7

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-  364 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-  364 (537)
                      .++++...++.|..||..++....       ......+.+++++|+|+++++ . ++.|.+||.. ..+.......... 
T Consensus        26 ~l~~~d~~~~~i~~~d~~~~~~~~-------~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~-~g~~~~~~~~~~~~   95 (297)
T 3g4e_A           26 SLLFVDIPAKKVCRWDSFTKQVQR-------VTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWK-EQSAVVLATVDNDK   95 (297)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEE-------EECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETT-TTEEEEEEECCTTC
T ss_pred             EEEEEECCCCEEEEEECCCCcEEE-------EeCCCceEEEEECCCCCEEEE-E-CCeEEEEECC-CCcEEEEEecCCCC
Confidence            356667778999999998875421       123467899999999995554 4 5679999987 3332222111110 


Q ss_pred             -CC--EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce--E--EeeeeEEEEcCCCCEEEEE-eCCCcE
Q psy10942        365 -GT--QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI--I--TGGVWFVNFSPLDRILISS-SGDATI  436 (537)
Q Consensus       365 -~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~--~~~i~~~~~s~~~~~l~~~-~~dg~i  436 (537)
                       ..  .-+....+|.+.+-+................++.  +.+++...  .  ......++|+||++.|+.+ +.++.|
T Consensus        96 ~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~--~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i  173 (297)
T 3g4e_A           96 KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS--LFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSV  173 (297)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE--ECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred             CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE--EECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcE
Confidence             00  0122233343333221110000000000000000  11111100  0  0145789999999877554 457889


Q ss_pred             EEEEC--CCcee-----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCc
Q psy10942        437 KLWCL--TDYVC-----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHK  509 (537)
Q Consensus       437 ~i~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~  509 (537)
                      .+|++  .++..     ...+..+......++++++|++.++....+.|.+||.++++.+..+..+...+          
T Consensus       174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~----------  243 (297)
T 3g4e_A          174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT----------  243 (297)
T ss_dssp             EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE----------
T ss_pred             EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc----------
Confidence            99987  44432     22333344567899999999988888888899999998899999888776677          


Q ss_pred             cccccceeee-cCCCEEEEEeC
Q psy10942        510 GFGLPRQLCS-RNSDCEYRGGW  530 (537)
Q Consensus       510 ~~~~~~~~~s-~~~~~l~s~~~  530 (537)
                       +++   +|. ||++.|+.++.
T Consensus       244 -t~~---~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          244 -TSC---CFGGKNYSEMYVTCA  261 (297)
T ss_dssp             -EEE---EEESGGGCEEEEEEB
T ss_pred             -eEE---EEeCCCCCEEEEEcC
Confidence             888   998 89988776554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.35  E-value=1e-10  Score=118.40  Aligned_cols=383  Identities=10%  Similarity=-0.016  Sum_probs=206.4

Q ss_pred             CcceEEEecCcceEEEEEcCccceeeeeccccccce----------eeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLET----------CAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET   84 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~   84 (537)
                      .+..++.++.++.|.-+|.++|+.+-++........          ....+          .+..+++++.++.|..+|.
T Consensus        76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~----------~~~~v~v~~~dg~l~alD~  145 (677)
T 1kb0_A           76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL----------WKGKVYVGAWDGRLIALDA  145 (677)
T ss_dssp             ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE----------ETTEEEEECTTSEEEEEET
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE----------ECCEEEEEcCCCEEEEEEC
Confidence            455677777888999999999999887764332110          01111          1235677777999999999


Q ss_pred             cceehhhhcCCC------cceEEEEEeccccEEEEEeC------CceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942         85 SAVKELYQHGLS------SPLVRIVRSSVKRMYAVVTA------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI  152 (537)
Q Consensus        85 ~~~~~~~~~~~~------~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  152 (537)
                      .+|+.+.+....      ..+.+--...++ .+++++.      ++.|+.+|..+           ++.+-++.......
T Consensus       146 ~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~t-----------G~~~W~~~~~~~~~  213 (677)
T 1kb0_A          146 ATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAET-----------GERKWRWFSVPGDP  213 (677)
T ss_dssp             TTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT-----------CCEEEEEESSCCCT
T ss_pred             CCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCC-----------CcEEEEeccCCCCc
Confidence            999988776643      122211111234 4455443      68999999999           66666665433211


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      ......+ .       ...+     .                 ..|..       . +... ..     +.  ......+
T Consensus       214 ~~~~~~~-~-------~~~g-----~-----------------~~w~~-------~-g~~~~~~-----~g--~~~w~~~  248 (677)
T 1kb0_A          214 SKPFEDE-S-------MKRA-----A-----------------RTWDP-------S-GKWWEAG-----GG--GTMWDSM  248 (677)
T ss_dssp             TSCCSSH-H-------HHHH-----H-----------------TTSCG-------G-GCHHHHC-----EE--CCCCSCE
T ss_pred             ccccccc-c-------cccc-----c-----------------ccccc-------c-CceeEeC-----CC--cccccce
Confidence            1111110 0       0000     1                 12210       0 0000 10     12  2222345


Q ss_pred             eccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeee
Q psy10942        232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNV  311 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~  311 (537)
                         +++|++..++.+..++.    .|......          .  ..+..      +    .-+.|..+|..+++.....
T Consensus       249 ---~~d~~~~~vy~~~~~~~----~w~~~~~~----------~--~~gd~------~----~~~sv~AlD~~TG~~~W~~  299 (677)
T 1kb0_A          249 ---TFDAELNTMYVGTGNGS----PWSHKVRS----------P--KGGDN------L----YLASIVALDPDTGKYKWHY  299 (677)
T ss_dssp             ---EEETTTTEEEEECCCEE----SSCHHHHS----------T--TCCCC------T----TTTEEEEECTTTCCEEEEE
T ss_pred             ---eEcCCCCEEEEECCCCc----cccCCCCC----------c--cCCCC------e----eeEEEEEEECCCCCEEEEE
Confidence               67888888887776543    23322100          0  00000      0    0135777777777664433


Q ss_pred             eccccccc-------CCCeEEEEEcCCC---CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        312 LRGHKKGH-------EKDINCVTVSPND---KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       312 ~~~~~~~~-------~~~v~~~~~s~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                      .   ...|       .....-+....+|   +.++.++.+|.++++|.. +++.+......+..          ...-+|
T Consensus       300 ~---~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~-tG~~l~~~~~~~~~----------~~~~~d  365 (677)
T 1kb0_A          300 Q---ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT-NGKFISAKNFVPVN----------WASGYD  365 (677)
T ss_dssp             E---SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT-TCCEEEEEESSCCS----------SEEEEC
T ss_pred             e---cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC-CCCEeccccccccC----------cccccC
Confidence            1   1111       1122223333467   678888888999999988 56666555443311          011122


Q ss_pred             CCCCeeeeeeccC-CcceEEEEEec--CCCceEEeeeeEEEEcCCCCEEEEEeC--------------------------
Q psy10942        382 IKTSTCVSTFDKH-ALKIWTLAITK--DENQIITGGVWFVNFSPLDRILISSSG--------------------------  432 (537)
Q Consensus       382 ~~~~~~~~~~~~~-~~~i~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~--------------------------  432 (537)
                       .++..+..-... ...-  ....|  .|.    ..-..++|+|++.++++...                          
T Consensus       366 -~~g~~~~~~~~~~~~~~--~~~~P~~~G~----~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  438 (677)
T 1kb0_A          366 -KHGKPIGIAAARDGSKP--QDAVPGPYGA----HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT  438 (677)
T ss_dssp             -TTSCEEECGGGGCTTSC--EECSSCTTCS----SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred             -CCCceeeccccCcCCCc--cEECcCcccc----cCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccc
Confidence             222222100000 0000  00000  000    01123455565555554322                          


Q ss_pred             -----------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942        433 -----------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       433 -----------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                                       .|.|..||+.+++.+..++ +..++....+..++.+++.++.||.+++||.++|+.+..+...
T Consensus       439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~  517 (677)
T 1kb0_A          439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG  517 (677)
T ss_dssp             TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence                             2789999999999998887 3445556667778889999999999999999999999998755


Q ss_pred             ccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        496 ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       496 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      ....          ...+   .++++|+.+++.
T Consensus       518 ~~~~----------~~p~---~y~~~G~~~v~~  537 (677)
T 1kb0_A          518 TGVV----------AAPS---TYMVDGRQYVSV  537 (677)
T ss_dssp             SCCC----------SCCE---EEEETTEEEEEE
T ss_pred             CCcc----------cCCE---EEEeCCEEEEEE
Confidence            4322          0344   777888755543

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.35  E-value=4.1e-09  Score=95.97  Aligned_cols=258  Identities=5%  Similarity=-0.078  Sum_probs=160.8

Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc--cccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                      ...+.++   ++.++|+.+++...++.+.  .|+.. +.........  .....+......  .++++...++.|..+|.
T Consensus        19 ~~~p~~i---~~d~~g~l~v~~~~~~~v~--~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~v~~~d~   90 (300)
T 2qc5_A           19 DSGPYGI---TSSEDGKVWFTQHKANKIS--SLDQS-GRIKEFEVPTPDAKVMCLIVSSLG--DIWFTENGANKIGKLSK   90 (300)
T ss_dssp             TCCEEEE---EECTTSCEEEEETTTTEEE--EECTT-SCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT
T ss_pred             CCCccee---eECCCCCEEEEcCCCCeEE--EECCC-CceEEEECCCCCCcceeEEECCCC--CEEEEecCCCeEEEECC
Confidence            5678899   9999999888877788888  88877 3221110000  001111111111  35555555788999998


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------eEEEEecCCCCEEEEEc
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------LNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~l~~~~  372 (537)
                      . ++.. ..   ........+.++++.++++++++...++.|..+|.. ....          ...+...+++..+++..
T Consensus        91 ~-g~~~-~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~  164 (300)
T 2qc5_A           91 K-GGFT-EY---PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN  164 (300)
T ss_dssp             T-SCEE-EE---ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred             C-CCeE-Ee---cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence            7 4331 11   112234668999999999888877667888888876 2211          22333445566666666


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-ee
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LE  451 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~  451 (537)
                      .++.|..+|. +++... +..           +...    ..+..+++++++++.++....+.|.+||. +++.... +.
T Consensus       165 ~~~~i~~~~~-~g~~~~-~~~-----------~~~~----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~  226 (300)
T 2qc5_A          165 QNNSIGRITN-TGKLEE-YPL-----------PTNA----AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIP  226 (300)
T ss_dssp             TTTEEEEECT-TCCEEE-EEC-----------SSTT----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred             CCCeEEEECC-CCcEEE-eeC-----------CCCC----CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECC
Confidence            6777888877 443322 111           0000    15678899999987777666778999998 4443332 33


Q ss_pred             cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      .+...+.+++++++|+++++...++.|..|+. +++.... +......+           .++   ++.++|+++++..
T Consensus       227 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-----------~~i---~~~~~g~l~v~~~  290 (300)
T 2qc5_A          227 TPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEP-----------HGI---TFGKDGSVWFALK  290 (300)
T ss_dssp             STTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCC-----------CCE---EECTTSCEEEECS
T ss_pred             CCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCcc-----------cee---EeCCCCCEEEEcc
Confidence            34566899999999987777666789999998 4544321 22223334           777   9999998766544

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.33  E-value=3.8e-11  Score=111.16  Aligned_cols=164  Identities=10%  Similarity=0.022  Sum_probs=123.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc----------ee--------eEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGL----------KL--------LNVLRGHKKGTQIVSTGADGLLKLWSIK  383 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----------~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~  383 (537)
                      .++.+++++...++++|+.++ +.+|++..-.          +.        +..+..  ++..|+++ .++.|++||++
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-TRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence            688999999999999999875 6669854211          01        333344  67888888 88999999998


Q ss_pred             CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                      +.........+..                 ++.++.+.+.  .++++..||.|.+||++++....    +...|++++||
T Consensus       115 sl~~~~~~~~~~~-----------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WS  171 (388)
T 1xip_A          115 ELSEFRTVTSFEK-----------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVT  171 (388)
T ss_dssp             STTCEEEEEECSS-----------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEEC
T ss_pred             hhhccCccceeec-----------------ceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEc
Confidence            8765555544444                 3334444433  28888999999999999876543    44689999999


Q ss_pred             cCCCEEEEEeCCCcEEEEECCCCee--EEEe------c---CCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942        464 NKGTQIVSTGADGLLKLWSIKTSTC--VSTF------D---KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG  528 (537)
Q Consensus       464 ~~~~~l~s~~~dg~v~vwd~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~  528 (537)
                      |+|  ++.|..||.+++|+...++.  ...+      .   +|...|           .++   .|.+++.+|++=
T Consensus       172 pkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V-----------~sI---~wl~~~~flv~y  231 (388)
T 1xip_A          172 NSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP-----------LSV---TILSPQDFLAVF  231 (388)
T ss_dssp             SSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE-----------EEE---EESSSSEEEEEE
T ss_pred             CCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeE-----------EEE---EEecCCeEEEEE
Confidence            999  78899999999999887775  5566      2   356677           888   999999998863

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.31  E-value=7.8e-10  Score=100.80  Aligned_cols=273  Identities=8%  Similarity=-0.044  Sum_probs=160.6

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee-ccccC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNG  175 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~  175 (537)
                      ..+.++++.++|+..++...++.|.+||...           ......+..+...+..+++. +++. ++++.. .+.  
T Consensus        20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~-~~g~-l~v~~~~~~~--   84 (300)
T 2qc5_A           20 SGPYGITSSEDGKVWFTQHKANKISSLDQSG-----------RIKEFEVPTPDAKVMCLIVS-SLGD-IWFTENGANK--   84 (300)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTS-----------CEEEEECSSTTCCEEEEEEC-TTSC-EEEEETTTTE--
T ss_pred             CCcceeeECCCCCEEEEcCCCCeEEEECCCC-----------ceEEEECCCCCCcceeEEEC-CCCC-EEEEecCCCe--
Confidence            5789999999998877766778999999773           11111222233457788887 5555 444433 333  


Q ss_pred             CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942        176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE  254 (537)
Q Consensus       176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~  254 (537)
                        |                 ..+|.       . ++.. +.   ....  ...+.++   ++.++|+++++...++.+. 
T Consensus        85 --v-----------------~~~d~-------~-g~~~~~~---~~~~--~~~~~~i---~~~~~g~l~v~~~~~~~i~-  128 (300)
T 2qc5_A           85 --I-----------------GKLSK-------K-GGFTEYP---LPQP--DSGPYGI---TEGLNGDIWFTQLNGDRIG-  128 (300)
T ss_dssp             --E-----------------EEECT-------T-SCEEEEE---CSST--TCCEEEE---EECSTTCEEEEETTTTEEE-
T ss_pred             --E-----------------EEECC-------C-CCeEEec---CCCC--CCCCccc---eECCCCCEEEEccCCCeEE-
Confidence              6                 55665       4 2222 11   0133  4668889   8999998888877677888 


Q ss_pred             ccccccCCCcccccccc---cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC
Q psy10942        255 ELEKRKTYHFPLFGIFV---PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN  331 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  331 (537)
                       .++.. +...... ..   .....+......  +++++...++.|..++. +++... .   ....+...+.+++++++
T Consensus       129 -~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~---~~~~~~~~~~~i~~d~~  198 (300)
T 2qc5_A          129 -KLTAD-GTIYEYD-LPNKGSYPAFITLGSDN--ALWFTENQNNSIGRITN-TGKLEE-Y---PLPTNAAAPVGITSGND  198 (300)
T ss_dssp             -EECTT-SCEEEEE-CSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEE-E---ECSSTTCCEEEEEECTT
T ss_pred             -EECCC-CCEEEcc-CCCCCCCceeEEECCCC--CEEEEecCCCeEEEECC-CCcEEE-e---eCCCCCCCcceEEECCC
Confidence             88776 2211110 00   001111111111  34555555778888887 333221 1   11233456788999988


Q ss_pred             CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                      +++.++....+.|.+++.. .. ... +..                              .....               
T Consensus       199 g~l~v~~~~~~~i~~~~~~-g~-~~~-~~~------------------------------~~~~~---------------  230 (300)
T 2qc5_A          199 GALWFVEIMGNKIGRITTT-GE-ISE-YDI------------------------------PTPNA---------------  230 (300)
T ss_dssp             SSEEEEETTTTEEEEECTT-CC-EEE-EEC------------------------------SSTTC---------------
T ss_pred             CCEEEEccCCCEEEEEcCC-Cc-EEE-EEC------------------------------CCCCC---------------
Confidence            8776666556677777763 21 111 100                              00000               


Q ss_pred             EeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee-eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL-KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                        .+.+++++++|+++++...++.|..||.. ++.. ..+......+.+++++++|+++++.. . .|..+|.
T Consensus       231 --~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          231 --RPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             --CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             --CceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence              56788899999877766667899999984 4332 22333445688999999998666554 4 6766664

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.28  E-value=2.9e-09  Score=97.77  Aligned_cols=237  Identities=12%  Similarity=0.045  Sum_probs=144.2

Q ss_pred             cCeEEEEeccCcccCCCeeee-------ccCCCcceeccccccCCCcccccc-----cccccceeeeeeCCcceEEEEEe
Q psy10942        225 LKTVTLLERGKTVKEEDLFPR-------QSMEPSTLEELEKRKTYHFPLFGI-----FVPEAEHGAFYTGGTVELLASGS  292 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~-------~~~d~~i~~~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~l~~~~  292 (537)
                      -....++   +|+++++.+++       +..++.|.  .|+..++.......     .......+......  ..+..+.
T Consensus        17 ~~~~~~~---~~~~~g~l~~~~~~~~~~~~~~~~i~--~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--g~l~v~~   89 (314)
T 1pjx_A           17 IPGAEGP---VFDKNGDFYIVAPEVEVNGKPAGEIL--RIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDA--NQLFVAD   89 (314)
T ss_dssp             CTTCEEE---EECTTSCEEEEETTCEETTEECCEEE--EECTTTCCEEEEECCEETTEECCEEEEEECSSS--SEEEEEE
T ss_pred             CCCccCc---eECCCCCEEEEEeccccCCCCCCEEE--EEeCCCCcEEEEEecccCCCCCCCceEEEecCC--CcEEEEE
Confidence            3455778   89999988888       67788899  99876643211110     00001111111110  2344444


Q ss_pred             CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEEccCCcee--
Q psy10942        293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---------------KTVKVWSTTGGLKL--  355 (537)
Q Consensus       293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------~~i~i~d~~~~~~~--  355 (537)
                      ..+.|.+||.+ ++................+.+++++|+|+++++...+               +.|..++.......  
T Consensus        90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~  168 (314)
T 1pjx_A           90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD  168 (314)
T ss_dssp             TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE
T ss_pred             CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec
Confidence            45578899988 5432110011111122457899999999887776554               45666665411111  


Q ss_pred             -----eEEEEec----CCCCEE-EEEcCCCcEEEEECC-CCeee-----eeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        356 -----LNVLRGH----KKGTQI-VSTGADGLLKLWSIK-TSTCV-----STFDKHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       356 -----~~~~~~~----~~~~~l-~~~~~d~~i~i~d~~-~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                           ...+...    ++++.+ ++...++.|.+||.. +++..     ..+..+.                .+.+..++
T Consensus       169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~p~~i~  232 (314)
T 1pjx_A          169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH----------------EGGADGMD  232 (314)
T ss_dssp             EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS----------------SCEEEEEE
T ss_pred             cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC----------------CCCCCceE
Confidence                 1223344    556444 444567889999876 33311     1111110                01467789


Q ss_pred             EcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE-EEeCCCcEEEEECCC
Q psy10942        420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGADGLLKLWSIKT  485 (537)
Q Consensus       420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~  485 (537)
                      ++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus       233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            999999888887889999999987777777777767899999999999555 445568899999864

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.28  E-value=3.1e-10  Score=104.86  Aligned_cols=278  Identities=6%  Similarity=-0.118  Sum_probs=167.2

Q ss_pred             EEEEEeCccc----eEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccCccc
Q psy10942         68 TFVLAGGEKS----LLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETGLEE  133 (537)
Q Consensus        68 ~~~~~~~~~~----~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~  133 (537)
                      +.+++...++    .|.+.|..+++.+.++.....- .++|+||+++++++.          .++.|.+||..+      
T Consensus        33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T------  105 (368)
T 1mda_H           33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT------  105 (368)
T ss_dssp             EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT------
T ss_pred             eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC------
Confidence            4444444344    7889999999999888754433 799999999999886          368899999999      


Q ss_pred             ccccccceeEEeecc-------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH--HHHHHHh
Q psy10942        134 RPNKILKFRKQFVGF-------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT--FERILEA  204 (537)
Q Consensus       134 ~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--wd~~~~~  204 (537)
                           ++.+.++..+       ......++|+ |++++++++.....  ..+                 .+  +|.    
T Consensus       106 -----~~vv~~I~v~~~~~~~~g~~P~~ia~S-pDGk~lyVan~~~~--~~v-----------------~V~~iD~----  156 (368)
T 1mda_H          106 -----FLPIADIELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGSS--AAA-----------------GLSVPGA----  156 (368)
T ss_dssp             -----CCEEEEEEETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSSS--CEE-----------------EEEETTT----
T ss_pred             -----CCEEEEEECCCccccccCCCcceEEEc-CCCCEEEEEccCCC--CeE-----------------EEEEEch----
Confidence                 7888887643       1246788999 78888887753321  226                 66  777    


Q ss_pred             hhcccccccccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC
Q psy10942        205 KFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG  283 (537)
Q Consensus       205 ~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (537)
                         .+ ...+.     -.   +   +.   ...|+++ .+++.+.|+.+.  +.++......                  
T Consensus       157 ---~t-v~~i~-----v~---~---~~---~~~p~g~~~~~~~~~dg~~~--~vd~~~~~~~------------------  198 (368)
T 1mda_H          157 ---SD-DQLTK-----SA---S---CF---HIHPGAAATHYLGSCPASLA--ASDLAAAPAA------------------  198 (368)
T ss_dssp             ---EE-EEEEE-----CS---S---CC---CCEEEETTEEECCCCTTSCE--EEECCSSCCC------------------
T ss_pred             ---hh-ceEEE-----CC---C---ce---EEccCCCeEEEEEcCCCCEE--EEECcccccc------------------
Confidence               54 11122     00   0   12   2334442 233344455554  4333320000                  


Q ss_pred             cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eeeE-----
Q psy10942        284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-KLLN-----  357 (537)
Q Consensus       284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~-----  357 (537)
                                ++.+..  ..+         ....-...+.   . ++++..++..+. +.+.+.|+.... +.+.     
T Consensus       199 ----------~~~v~~--~~t---------~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~  252 (368)
T 1mda_H          199 ----------AGIVGA--QCT---------GAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGN  252 (368)
T ss_dssp             ----------CEECCC--CSC---------TTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred             ----------CCeEEE--Eee---------eeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence                      000000  000         0001112222   2 556666555556 888888875211 1111     


Q ss_pred             ---------------EEEecCCCCEEEEEcC---------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        358 ---------------VLRGHKKGTQIVSTGA---------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       358 ---------------~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                                     .+..++++..++.+..         ++.+.++|+.+.+.+..+....                  
T Consensus       253 ~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~------------------  314 (368)
T 1mda_H          253 ESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH------------------  314 (368)
T ss_dssp             CTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE------------------
T ss_pred             cccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC------------------
Confidence                           1345566777765432         2356699999998888775443                  


Q ss_pred             eeeEEEEcCCCC-EEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942        414 GVWFVNFSPLDR-ILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN  464 (537)
Q Consensus       414 ~i~~~~~s~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~  464 (537)
                      ....++|+|||+ .+++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus       315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN  366 (368)
T ss_dssp             EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred             CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence            567889999997 455555 589999999999999999886544 35555543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.27  E-value=6.5e-09  Score=95.77  Aligned_cols=200  Identities=11%  Similarity=-0.011  Sum_probs=128.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------  355 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------  355 (537)
                      .++++...++.|..||..+++...      + .....+.+++++|+|+++++. .+ .|.+||... ++.          
T Consensus        62 ~l~~~d~~~~~i~~~d~~~~~~~~------~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~-g~~~~~~~~~~~~  131 (326)
T 2ghs_A           62 TAWWFNILERELHELHLASGRKTV------H-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTAT-GVLTLHAELESDL  131 (326)
T ss_dssp             EEEEEEGGGTEEEEEETTTTEEEE------E-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTT-CCEEEEECSSTTC
T ss_pred             EEEEEECCCCEEEEEECCCCcEEE------E-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCC-CcEEEEeeCCCCC
Confidence            356667778899999998875321      1 123579999999999877754 44 489999763 222          


Q ss_pred             ----eEEEEecCCCCEEEEEcC------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC
Q psy10942        356 ----LNVLRGHKKGTQIVSTGA------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR  425 (537)
Q Consensus       356 ----~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~  425 (537)
                          +..+...+++.++++...      .+.|..++  +++...... .                 ......++|+||++
T Consensus       132 ~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~-----------------~~~~~~i~~s~dg~  191 (326)
T 2ghs_A          132 PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-D-----------------ISIPNSICFSPDGT  191 (326)
T ss_dssp             TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-E-----------------ESSEEEEEECTTSC
T ss_pred             CCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-C-----------------CcccCCeEEcCCCC
Confidence                222333445554443321      12333333  232211100 0                 01456789999998


Q ss_pred             EEEEEe-CCCcEEEEECC--Cc-ee-----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        426 ILISSS-GDATIKLWCLT--DY-VC-----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       426 ~l~~~~-~dg~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      .++.+. .++.|.+|++.  ++ +.     ...+.........++++++|.++++...++.|.+|+. +++.+..+..+.
T Consensus       192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~  270 (326)
T 2ghs_A          192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG  270 (326)
T ss_dssp             EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC
T ss_pred             EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC
Confidence            776554 56899999985  55 31     2223223455788999999998887777788999998 677777777666


Q ss_pred             cceeccCCCCCCccccccceeee-cCCCEEEEEeC
Q psy10942        497 LKIRNSDSENDHKGFGLPRQLCS-RNSDCEYRGGW  530 (537)
Q Consensus       497 ~~i~~~~~~~~~~~~~~~~~~~s-~~~~~l~s~~~  530 (537)
                      ..+           .++   +|+ |+++.|+.++.
T Consensus       271 ~~~-----------~~~---af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          271 KQT-----------TCP---AFIGPDASRLLVTSA  291 (326)
T ss_dssp             SBE-----------EEE---EEESTTSCEEEEEEB
T ss_pred             CCc-----------EEE---EEecCCCCEEEEEec
Confidence            667           888   998 89887765543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.25  E-value=2.4e-09  Score=97.76  Aligned_cols=206  Identities=13%  Similarity=0.037  Sum_probs=127.3

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeE---------
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN---------  357 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------  357 (537)
                      ++++...++.|..|+......       .+..+...+..++++++|+++++...++.|.+|+.......+.         
T Consensus        59 l~~~d~~~~~i~~~~~~g~~~-------~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~  131 (305)
T 3dr2_A           59 LVWSDLVGRRVLGWREDGTVD-------VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLN  131 (305)
T ss_dssp             EEEEETTTTEEEEEETTSCEE-------EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECS
T ss_pred             EEEEECCCCEEEEEeCCCCEE-------EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccC
Confidence            566777788999999843321       2233456789999999999776666667899998762211111         


Q ss_pred             ---EEEecCCCCEEEE----EcC-------------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942        358 ---VLRGHKKGTQIVS----TGA-------------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF  417 (537)
Q Consensus       358 ---~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~  417 (537)
                         .+...++|.++++    +..             .+.|..+|..+++..           .+. .       ......
T Consensus       132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-----------~~~-~-------~~~p~g  192 (305)
T 3dr2_A          132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-----------RMA-D-------LDHPNG  192 (305)
T ss_dssp             CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-----------EEE-E-------ESSEEE
T ss_pred             CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-----------EEe-c-------CCCCcc
Confidence               1222233444443    211             123333443333221           111 0       014567


Q ss_pred             EEEcCCCCEEEEEeCC------CcEEEEECCCceee--eEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        418 VNFSPLDRILISSSGD------ATIKLWCLTDYVCL--KSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       418 ~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      ++|+||++.|+.+...      +.|.+|++......  ..+ ....+....++++++|++.++ +.+ .|.+|+. +++.
T Consensus       193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~  269 (305)
T 3dr2_A          193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQL  269 (305)
T ss_dssp             EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCE
T ss_pred             eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCE
Confidence            8999999988877665      68999998754311  111 112344567899999995554 444 4999997 6777


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                      +..+..+. .+           ..+   +|+|+++.|+.++.++..++
T Consensus       270 ~~~~~~~~-~~-----------~~~---~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          270 LGHIPTPG-TA-----------SNC---TFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             EEEEECSS-CC-----------CEE---EECTTSCEEEEEETTEEEEE
T ss_pred             EEEEECCC-ce-----------eEE---EEeCCCCEEEEEcCCeEEEE
Confidence            77776554 35           777   99999999988877765544

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.24  E-value=1e-07  Score=99.36  Aligned_cols=397  Identities=8%  Similarity=0.029  Sum_probs=212.7

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc-ccc---cceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-YES---LETCAVFHLSDETESKSGGKTFVLAGGEKSLL   79 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (537)
                      .|++|...  ++|.+. .+..+| +..||.++++....... ...   +..+  ...+        ++.+.+ ++..| |
T Consensus        89 ~I~~i~~d--~~g~lW-igT~~G-l~~yd~~~~~f~~~~~~~~~~~~~i~~i--~~d~--------~g~lwi-~t~~g-l  152 (795)
T 4a2l_A           89 ISRIVKTD--SQGRVW-IGTRDG-LSRYDEEKDIFQNFFYEKNGKHLQVNGI--EEIS--------PEQLLI-STPEG-L  152 (795)
T ss_dssp             CEEEEEEC--TTSCEE-EEESSC-EEEEETTTTEEEEECCEETTEECCCCEE--EEEE--------TTEEEE-EETTE-E
T ss_pred             ceeEEEEC--CCCCEE-EEeCCc-hheeCCCCCeEEeccccccCCCceEEEE--EECC--------CCCEEE-EECCc-e
Confidence            36777766  566544 444567 89999877654332111 111   3333  3333        444444 33344 8


Q ss_pred             EeeeccceehhhhcCCC--cc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhh
Q psy10942         80 HYYETSAVKELYQHGLS--SP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDI  155 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~--~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~  155 (537)
                      ..||..+++........  .. |.++...+++.+.+ ++.++.|..|+..++           +..... ..+...|.++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~i~~i  220 (795)
T 4a2l_A          153 IMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQK-----------TFEKVIPILGTKQIQAI  220 (795)
T ss_dssp             EEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTC-----------CEEECC----CCCEEEE
T ss_pred             EEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCC-----------eEEEecCCCCCCeeEEE
Confidence            88997765433221111  23 88998888887655 565545888987762           222111 1123346666


Q ss_pred             hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---cccCCCcCeEEEE
Q psy10942        156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE---RLGRDELKTVTLL  231 (537)
Q Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~---~~~h~~~~~v~~~  231 (537)
                      ... + .+.+.+++....    +                 .+||.       .+.+.. +....   ..-.  ...|.++
T Consensus       221 ~~d-~-~g~lwigt~~~G----l-----------------~~~~~-------~~~~~~~~~~~~~~~~~l~--~~~i~~i  268 (795)
T 4a2l_A          221 LQQ-S-PTRIWVATEGAG----L-----------------FLINP-------KTKEIKNYLHSPSNPKSIS--SNYIRSL  268 (795)
T ss_dssp             EEE-E-TTEEEEEEBSSC----E-----------------EEEET-------TTTEEEEECCCTTCTTSCS--CSBEEEE
T ss_pred             EEc-C-CCCEEEEECCCC----e-----------------EEEeC-------CCCeEEEeecCCCCccccC--CCeEEEE
Confidence            654 3 445667664433    5                 55555       443332 21000   0012  4568999


Q ss_pred             eccCcccCCCeeeeccCCCcceeccccccCCCccccccc--------ccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942        232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF--------VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT  303 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~  303 (537)
                         ...++|.+.+.. .+| +.  +++............        ...+..+.....   ..+-.|+.++-|..++..
T Consensus       269 ---~~d~~g~lWigt-~~G-l~--~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~---g~lWigt~~~Gl~~~~~~  338 (795)
T 4a2l_A          269 ---AMDSQNRLWIGT-FND-LN--IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ---GGMWLGTYFGGLNYYHPI  338 (795)
T ss_dssp             ---EECTTSCEEEEE-SSC-EE--EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT---SCEEEEESSSCEEEECGG
T ss_pred             ---EEcCCCCEEEEe-CCh-hh--eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC---cCEEEEECCCCeEEeCCC
Confidence               888888765543 444 66  777654321110000        000111110001   345567777778888765


Q ss_pred             CCceeeeeecc-cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-----------------eeeEEEEecCCC
Q psy10942        304 GGLKLLNVLRG-HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-----------------KLLNVLRGHKKG  365 (537)
Q Consensus       304 ~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-----------------~~~~~~~~~~~~  365 (537)
                      +.....-.... ...-....|.++...++|++ ..|+.++-+..|+.....                 ..+..+....++
T Consensus       339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g  417 (795)
T 4a2l_A          339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK  417 (795)
T ss_dssp             GGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred             cccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence            54321100000 00112456999999988864 456777678888876211                 112233333445


Q ss_pred             CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce
Q psy10942        366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV  445 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~  445 (537)
                      ..+..|+.++-+..+|..+++.........             .+....|.++...++|++.+.. . +.+.+||..+++
T Consensus       418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~-------------~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~  482 (795)
T 4a2l_A          418 SLVYIGTHAGGLSILHRNSGQVENFNQRNS-------------QLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS  482 (795)
T ss_dssp             TEEEEEETTTEEEEEETTTCCEEEECTTTS-------------CCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred             CEEEEEeCcCceeEEeCCCCcEEEeecCCC-------------CcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence            536667776778889988765432211100             0111267888888888866554 4 458899988765


Q ss_pred             eeeEeec------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        446 CLKSLEG------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       446 ~~~~~~~------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      .......      ....|.++...++|++.+...  +-+..||..+++.
T Consensus       483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~  529 (795)
T 4a2l_A          483 FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI  529 (795)
T ss_dssp             EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred             EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence            4332211      235689999999988666554  4588999877665

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.24  E-value=2.3e-10  Score=116.19  Aligned_cols=124  Identities=11%  Similarity=0.018  Sum_probs=79.4

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE---E-------------EEcCCCcEEEEECCCCeee
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI---V-------------STGADGLLKLWSIKTSTCV  388 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l---~-------------~~~~d~~i~i~d~~~~~~~  388 (537)
                      .++|+|+..++++...+....++..... ..   +.....+-.+   +             ....+|.+..||+.+++.+
T Consensus       393 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~-~~---~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~  468 (689)
T 1yiq_A          393 PMSYNPDTGLVYIPAHIMSAYYEHIPEA-PK---RNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA  468 (689)
T ss_dssp             CCEEETTTTEEEEEEEECCEEEECCSSC-CC---CCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred             cceECCCCCEEEEeccccceeeeecccc-cc---ccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence            3789999889998887766666544311 00   0000000000   0             0012588999999999988


Q ss_pred             eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCC
Q psy10942        389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGT  467 (537)
Q Consensus       389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~  467 (537)
                      ..+..+.                  +.....+...+.+++.++.||.++.||.++++.+.+++...+. ..-+.|..+|+
T Consensus       469 W~~~~~~------------------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~  530 (689)
T 1yiq_A          469 WEVPYVT------------------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE  530 (689)
T ss_dssp             EEEEESS------------------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             eEccCCC------------------CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence            7775543                  1222234456778999999999999999999999998855332 24467778887


Q ss_pred             EEE
Q psy10942        468 QIV  470 (537)
Q Consensus       468 ~l~  470 (537)
                      ..+
T Consensus       531 qyv  533 (689)
T 1yiq_A          531 QYV  533 (689)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.23  E-value=4.8e-09  Score=99.60  Aligned_cols=222  Identities=12%  Similarity=0.045  Sum_probs=136.5

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEE----
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVL----  359 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~----  359 (537)
                      +++++...++.|++||..++......     .. ..... ++|+|+++.|+++..++  .|.+++...... ...+    
T Consensus       143 ~lyv~d~~~~~I~~id~~~g~~~~~~-----~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~~~g~~~  214 (409)
T 3hrp_A          143 TVLAYQRDDPRVRLISVDDNKVTTVH-----PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PTRIGQLG  214 (409)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEE-----ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EEEEEECC
T ss_pred             CEEEEecCCCcEEEEECCCCEEEEee-----cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eEEeeecc
Confidence            35666666789999999877543211     11 12223 89999999999988766  788888763332 2222    


Q ss_pred             ----------EecCCCCEEEEEcCCCcEEEEECCCCeeeee----eccCCcceEEEEEecCCCceEEeeeeEEEEcCC-C
Q psy10942        360 ----------RGHKKGTQIVSTGADGLLKLWSIKTSTCVST----FDKHALKIWTLAITKDENQIITGGVWFVNFSPL-D  424 (537)
Q Consensus       360 ----------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~  424 (537)
                                ..++++..++.+..++.|+.||..++.....    .......               .+...++|+|+ +
T Consensus       215 ~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~---------------~P~~~ia~~p~~g  279 (409)
T 3hrp_A          215 STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGT---------------NPGPYLIYYFVDS  279 (409)
T ss_dssp             TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCC---------------SSCCEEEEETTTT
T ss_pred             chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCC---------------CccccEEEeCCCC
Confidence                      2234344555566788899999887653221    1111000               01127899995 5


Q ss_pred             CEEEEEeCCCcEEEEECCCceeeeEeecCC---------------cceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942        425 RILISSSGDATIKLWCLTDYVCLKSLEGHD---------------ASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC  488 (537)
Q Consensus       425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~  488 (537)
                      .++++-..++.|+.|+....  +..+.++.               .....++++|+|+++++-. .++.|+.|++.+++.
T Consensus       280 ~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v  357 (409)
T 3hrp_A          280 NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV  357 (409)
T ss_dssp             EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred             EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence            55555566789999987643  33333332               3478999999999777777 789999999878864


Q ss_pred             EEEecCCccc---eecc-CCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        489 VSTFDKHALK---IRNS-DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       489 ~~~~~~~~~~---i~~~-~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                       ..+.++...   .... ....-..+..+   +++++|.++++-..++.|+.
T Consensus       358 -~~~~g~~~~~g~~~g~~~~~~~~~P~gi---avd~~g~lyVad~~n~~Ir~  405 (409)
T 3hrp_A          358 -STVAGQVDVASQIDGTPLEATFNYPYDI---CYDGEGGYWIAEAWGKAIRK  405 (409)
T ss_dssp             -EEEEECTTCBSCCCBSTTTCCBSSEEEE---EECSSSEEEEEESTTCEEEE
T ss_pred             -EEEeCCCCCCCcCCCChhceEeCCceEE---EEcCCCCEEEEECCCCeEEE
Confidence             444443110   0000 00001123677   99999877777777777764

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.23  E-value=1.4e-09  Score=110.31  Aligned_cols=271  Identities=10%  Similarity=0.017  Sum_probs=167.9

Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccc-cccceeeeeeCCc-c--eEEEEEe------CCCeEEEEECCCCcee
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV-PEAEHGAFYTGGT-V--ELLASGS------LDKTVKVWSTTGGLKL  308 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~-v--~~l~~~~------~d~~i~i~~~~~~~~~  308 (537)
                      ++..++.++.|+.+.  .+|..+++........ ...... ...... +  ..++.+.      .++.|+.||..+++..
T Consensus       120 ~~g~v~v~~~dg~l~--AlDa~TG~~~W~~~~~~~~~~~~-~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~  196 (689)
T 1yiq_A          120 WKGKVYVGVLDGRLE--AIDAKTGQRAWSVDTRADHKRSY-TITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEA  196 (689)
T ss_dssp             ETTEEEEECTTSEEE--EEETTTCCEEEEEECCSCTTSCC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             ECCEEEEEccCCEEE--EEECCCCCEeeeecCcCCCCCCc-cccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence            456788888889998  8888876543332111 000000 001111 1  3444443      3689999999999876


Q ss_pred             eeeeccccc--------------------------ccCCCeEEEEEcCCCCEEEEEeCCCc-------------------
Q psy10942        309 LNVLRGHKK--------------------------GHEKDINCVTVSPNDKLLASGSLDKT-------------------  343 (537)
Q Consensus       309 ~~~~~~~~~--------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~-------------------  343 (537)
                      .+.....-.                          .+......++++|+..+++.+..++.                   
T Consensus       197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~  276 (689)
T 1yiq_A          197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS  276 (689)
T ss_dssp             EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred             EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence            654211000                          11111235789999999999987763                   


Q ss_pred             EEEEEccCCceeeEEEEecC-------------------CCC---EEEEEcCCCcEEEEECCCCeeeeeeccCCc-ceEE
Q psy10942        344 VKVWSTTGGLKLLNVLRGHK-------------------KGT---QIVSTGADGLLKLWSIKTSTCVSTFDKHAL-KIWT  400 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~-------------------~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~i~~  400 (537)
                      |..+|.. +++.+-.+...+                   ++.   .++.++.+|.++++|..+++.+........ ....
T Consensus       277 v~AlD~~-TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~  355 (689)
T 1yiq_A          277 IVAVNAD-TGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG  355 (689)
T ss_dssp             EEEEETT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             EEEEEcc-CCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence            9999998 455544443311                   122   677888999999999999998855433221 1111


Q ss_pred             EE-------E-------ecCCCceEEe-------eeeEEEEcCCCCEEEEEeC---------------------------
Q psy10942        401 LA-------I-------TKDENQIITG-------GVWFVNFSPLDRILISSSG---------------------------  432 (537)
Q Consensus       401 ~~-------~-------~~~~~~~~~~-------~i~~~~~s~~~~~l~~~~~---------------------------  432 (537)
                      +.       .       .+++......       .-..++|+|+..++++...                           
T Consensus       356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  435 (689)
T 1yiq_A          356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR  435 (689)
T ss_dssp             EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred             cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence            00       0       0111111100       1223677777777666522                           


Q ss_pred             ------------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        433 ------------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       433 ------------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                                        +|.|..||+.+++.+..++.+. ++..-.+...+.+++.++.||.++.||.++|+.+..++.
T Consensus       436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~  514 (689)
T 1yiq_A          436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA  514 (689)
T ss_dssp             ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence                              3779999999999999887553 344446677788999999999999999999999998876


Q ss_pred             CccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        495 HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       495 ~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      ....+          ...+   .|+.+|++.++
T Consensus       515 ~~~~~----------~~p~---ty~~~G~qyv~  534 (689)
T 1yiq_A          515 ASGVM----------AAPV---TYSVDGEQYVT  534 (689)
T ss_dssp             SSCCC----------SCCE---EEEETTEEEEE
T ss_pred             CCCcc----------cCce---EEEECCEEEEE
Confidence            54332          0345   78888885543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.23  E-value=7.3e-09  Score=97.77  Aligned_cols=253  Identities=8%  Similarity=-0.037  Sum_probs=158.2

Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++..++.++.++.+.  .+|..+++...................   ..++.++.++.|..+|..+++............
T Consensus       102 ~~~~v~v~~~~g~l~--a~d~~tG~~~W~~~~~~~~~~~p~~~~---~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~  176 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVY--ALNTSDGTVAWQTKVAGEALSRPVVSD---GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL  176 (376)
T ss_dssp             ETTEEEEEETTSEEE--EEETTTCCEEEEEECSSCCCSCCEEET---TEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred             eCCEEEEEcCCCEEE--EEECCCCCEEEEEeCCCceEcCCEEEC---CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence            456777788888888  888887653332211111100000111   467888899999999999988654431110000


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---------------C----CCCEEEEEcCCCcEEE
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH---------------K----KGTQIVSTGADGLLKL  379 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------~----~~~~l~~~~~d~~i~i  379 (537)
                      ...........  +..++++..++.+..+|.. .++.+-.....               .    .+..++.++.++.+..
T Consensus       177 ~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~  253 (376)
T 3q7m_A          177 SLRGESAPTTA--FGAAVVGGDNGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA  253 (376)
T ss_dssp             --CCCCCCEEE--TTEEEECCTTTEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred             eecCCCCcEEE--CCEEEEEcCCCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence            00000112222  4467778889999999998 44443333211               0    1567788888999999


Q ss_pred             EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-CcceE
Q psy10942        380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASVL  458 (537)
Q Consensus       380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~  458 (537)
                      +|..+++.+.......                   ...+..  ++..++.++.++.|..+|..+++.+...... ...+.
T Consensus       254 ~d~~tG~~~w~~~~~~-------------------~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~  312 (376)
T 3q7m_A          254 LDLRSGQIMWKRELGS-------------------VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT  312 (376)
T ss_dssp             EETTTCCEEEEECCCC-------------------EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred             EECCCCcEEeeccCCC-------------------CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence            9999998776654221                   111222  3557778888999999999999988776622 22233


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        459 RCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .....  +..|+.++.+|.+.++|..+|+.+.........+           .+.+  ..  .+..|+.++.+|.|..|
T Consensus       313 ~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~-----------~~~~--~~--~~~~l~v~~~~G~l~~~  374 (376)
T 3q7m_A          313 SPVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGF-----------QTEP--VA--ADGKLLIQAKDGTVYSI  374 (376)
T ss_dssp             CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCB-----------CSCC--EE--ETTEEEEEBTTSCEEEE
T ss_pred             CCEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcc-----------eeCC--EE--ECCEEEEEeCCCEEEEE
Confidence            33332  4578889999999999999999988776544444           2220  22  35678888899988764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.22  E-value=2.1e-07  Score=97.03  Aligned_cols=420  Identities=10%  Similarity=0.059  Sum_probs=227.8

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc--ccc-cceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA--YES-LETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      |.++...  +++.+.+... +| |..||.++++.......  ... +..+  ...+        ++.+ ..++.++.|..
T Consensus       133 i~~i~~d--~~g~lwi~t~-~g-l~~~~~~~~~~~~~~~~~~~~~~i~~i--~~d~--------~g~l-wigt~~~Gl~~  197 (795)
T 4a2l_A          133 VNGIEEI--SPEQLLISTP-EG-LIMFDIKESKFIDDSFSTAMHKTIAST--LYRQ--------GDQI-YIGTSTDGLYT  197 (795)
T ss_dssp             CCEEEEE--ETTEEEEEET-TE-EEEEETTTTEEECSSSCHHHHTCCEEE--EEEE--------TTEE-EEEESSSCEEE
T ss_pred             EEEEEEC--CCCCEEEEEC-Cc-eEEEECCCCEEEeccCCCCCCcceEEE--EECC--------CCCE-EEEECCCCEEE
Confidence            6677666  6776665544 55 88999877654321110  111 3333  3333        3343 34444445888


Q ss_pred             eeccceehhhhc--CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-------chhhh
Q psy10942         82 YETSAVKELYQH--GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-------FSDEI  152 (537)
Q Consensus        82 wd~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v  152 (537)
                      ||..+++.....  .....|.++...+++.+.+ ++.++-|..||..+           .+.......       ....|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~i  265 (795)
T 4a2l_A          198 YSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKT-----------KEIKNYLHSPSNPKSISSNYI  265 (795)
T ss_dssp             EETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTT-----------TEEEEECCCTTCTTSCSCSBE
T ss_pred             EeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCC-----------CeEEEeecCCCCccccCCCeE
Confidence            988766543221  1235788888888887554 45444488899876           222221111       12346


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---cccCCCcCeE
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE---RLGRDELKTV  228 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~---~~~h~~~~~v  228 (537)
                      .++... + .+.|.+++.. .    +                 .+||.       .+.... +....   ..-.  ...|
T Consensus       266 ~~i~~d-~-~g~lWigt~~-G----l-----------------~~~~~-------~~~~~~~~~~~~~~~~~l~--~~~i  312 (795)
T 4a2l_A          266 RSLAMD-S-QNRLWIGTFN-D----L-----------------NIYHE-------GTDSFASYSSNPVENGSLS--QRSV  312 (795)
T ss_dssp             EEEEEC-T-TSCEEEEESS-C----E-----------------EEEET-------TTTEEEEECCCTTSTTSCS--SSCE
T ss_pred             EEEEEc-C-CCCEEEEeCC-h----h-----------------heEcC-------CCCeEEEEecCCCCCCCCC--CCcE
Confidence            777665 3 4557777754 3    5                 55555       333322 11000   0012  4679


Q ss_pred             EEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-------ccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-------VPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                      .++   ...++|.+. .|+.++-+.  .++............       ...+..+.....   ..+-.|+.++-|..|+
T Consensus       313 ~~i---~~D~~g~lW-igt~~~Gl~--~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~---g~lWiGt~~~Gl~~~~  383 (795)
T 4a2l_A          313 RSI---FMDSQGGMW-LGTYFGGLN--YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD---KNLWIGTNDGGLNLYN  383 (795)
T ss_dssp             EEE---EECTTSCEE-EEESSSCEE--EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT---SCEEEEESSSCEEEEC
T ss_pred             EEE---EEeCCcCEE-EEECCCCeE--EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC---CCEEEEECCCCeEEEc
Confidence            999   888888654 455555566  676554321110000       000111111111   3466677777788898


Q ss_pred             CCCCceeeeeeccc-c---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-------------eeeEEEEecCC
Q psy10942        302 TTGGLKLLNVLRGH-K---KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-------------KLLNVLRGHKK  364 (537)
Q Consensus       302 ~~~~~~~~~~~~~~-~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-------------~~~~~~~~~~~  364 (537)
                      ..++....-. ... .   .-....|.++...++++.|..|+.++-+..+|.....             ..+..+....+
T Consensus       384 ~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~  462 (795)
T 4a2l_A          384 PITQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE  462 (795)
T ss_dssp             TTTCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred             CCCCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence            8766432111 000 0   0124679999999898856677777779999876321             11233333444


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                      +...+.. . +-+.+||..+++....... .          +...+....|.++..+++|++.+.. . +.|..||..++
T Consensus       463 g~lwigt-~-~Gl~~~~~~~~~~~~~~~~-~----------~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~  527 (795)
T 4a2l_A          463 GNLWLGT-L-SALVRFNPEQRSFTTIEKE-K----------DGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGL  527 (795)
T ss_dssp             SCEEEEE-S-SCEEEEETTTTEEEECCBC-T----------TCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETT
T ss_pred             CCEEEEe-c-CceeEEeCCCCeEEEcccc-c----------cccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCC
Confidence            5544444 3 4588888877654322111 0          0000111267888888888866654 4 56888998776


Q ss_pred             eeeeEee-------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC----ccceeccCCCCCCccccc
Q psy10942        445 VCLKSLE-------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH----ALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       445 ~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~  513 (537)
                      +.  .+.       .....|.++...++|.+.++.. . -+..||..+++.. .+...    ...|           .++
T Consensus       528 ~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~gl~~~~i-----------~~i  591 (795)
T 4a2l_A          528 DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIK-RYNTTNGLPNNVV-----------YGI  591 (795)
T ss_dssp             EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEE-EECGGGTCSCSCE-----------EEE
T ss_pred             eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEE-EeCCCCCCchhhe-----------EEE
Confidence            54  222       1234688999999988666543 4 5889998776543 33221    1233           555


Q ss_pred             cceeeecCCCEEEEE
Q psy10942        514 PRQLCSRNSDCEYRG  528 (537)
Q Consensus       514 ~~~~~s~~~~~l~s~  528 (537)
                         ...++|++.+++
T Consensus       592 ---~~d~~g~lWi~t  603 (795)
T 4a2l_A          592 ---LEDSFGRLWLST  603 (795)
T ss_dssp             ---EECTTSCEEEEE
T ss_pred             ---EECCCCCEEEEc
Confidence               777777766654

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.22  E-value=9.6e-10  Score=102.20  Aligned_cols=200  Identities=8%  Similarity=-0.093  Sum_probs=125.8

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEccCCceeeEEEEec----------------CC-CCEEEEEc---
Q psy10942        318 GHEKDINCVTVSPNDKLLASGSL-----DKTVKVWSTTGGLKLLNVLRGH----------------KK-GTQIVSTG---  372 (537)
Q Consensus       318 ~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~----------------~~-~~~l~~~~---  372 (537)
                      .+...+..++++++++++++-..     +..|.+||+. +.+.+..+...                ++ +..+++..   
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~  142 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD  142 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence            34567899999999876665433     5789999988 55555544431                12 33445544   


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceE-EEEEecCCCceE-----------EeeeeEEEEcCCCCEEEEEeCCC-cEEEE
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIW-TLAITKDENQII-----------TGGVWFVNFSPLDRILISSSGDA-TIKLW  439 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~~~~~dg-~i~i~  439 (537)
                      .++.|.+||+.+++....+..|..... ...+.+++..+.           ...+..++|+||++.|+++..++ .+..+
T Consensus       143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~  222 (343)
T 2qe8_A          143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI  222 (343)
T ss_dssp             GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence            578899999998887666654321100 012222332211           12468899999999998887766 45444


Q ss_pred             ECC---Cc-----eeee--EeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC-ccceeccCCCCCC
Q psy10942        440 CLT---DY-----VCLK--SLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH-ALKIRNSDSENDH  508 (537)
Q Consensus       440 d~~---~~-----~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-~~~i~~~~~~~~~  508 (537)
                      +..   .+     +...  ...++......++++++|.++++...++.|.+||..+++........ ....         
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p---------  293 (343)
T 2qe8_A          223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWT---------  293 (343)
T ss_dssp             EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCE---------
T ss_pred             EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecC---------
Confidence            432   11     0001  12234445678999999999999888999999998667654333221 2233         


Q ss_pred             ccccccceeeecCCCEEEEEeCCC
Q psy10942        509 KGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       509 ~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                        .++   +|.++++++++.+..+
T Consensus       294 --~~v---a~~~~g~l~v~~~~~~  312 (343)
T 2qe8_A          294 --DSF---NFGSDGYLYFDCNQLH  312 (343)
T ss_dssp             --EEE---EECTTSCEEEEECCGG
T ss_pred             --Cee---EECCCCcEEEEeCccc
Confidence              677   9999999888876443

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.20  E-value=1.3e-09  Score=99.10  Aligned_cols=243  Identities=10%  Similarity=-0.002  Sum_probs=143.0

Q ss_pred             ceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         98 PLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        98 ~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      -.....|+|+++ ++++...++.|..||..+           .+. ..+. ....+.+++++ ++++ ++++.. ..   
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~-----------~~~-~~~~-~~~~~~~i~~~-~dG~-l~v~~~-~~---   74 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFT-----------KQV-QRVT-MDAPVSSVALR-QSGG-YVATIG-TK---   74 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTT-----------CCE-EEEE-CSSCEEEEEEB-TTSS-EEEEET-TE---
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCC-----------CcE-EEEe-CCCceEEEEEC-CCCC-EEEEEC-Ce---
Confidence            456788999654 555656678999999987           332 2222 34568889998 5666 555543 33   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE  255 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~  255 (537)
                       |                 .+||.       .+++.. +........  ...+..+   +++|+|+++++........  
T Consensus        75 -l-----------------~~~d~-------~~g~~~~~~~~~~~~~--~~~~~di---~~d~dG~l~~~~~~~~~~~--  122 (297)
T 3g4e_A           75 -F-----------------CALNW-------KEQSAVVLATVDNDKK--NNRFNDG---KVDPAGRYFAGTMAEETAP--  122 (297)
T ss_dssp             -E-----------------EEEET-------TTTEEEEEEECCTTCS--SEEEEEE---EECTTSCEEEEEEECCSBT--
T ss_pred             -E-----------------EEEEC-------CCCcEEEEEecCCCCC--CCCCCCE---EECCCCCEEEecCCccccc--
Confidence             6                 66776       555443 220000011  3457888   8999998666433221110  


Q ss_pred             cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942        256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL  335 (537)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  335 (537)
                       .....                               ..+.|..++... + ...     ...+....+.++|+|+++.|
T Consensus       123 -~~~~~-------------------------------~~~~l~~~d~~g-~-~~~-----~~~~~~~pngi~~spdg~~l  163 (297)
T 3g4e_A          123 -AVLER-------------------------------HQGALYSLFPDH-H-VKK-----YFDQVDISNGLDWSLDHKIF  163 (297)
T ss_dssp             -TBCCT-------------------------------TCEEEEEECTTS-C-EEE-----EEEEESBEEEEEECTTSCEE
T ss_pred             -ccccC-------------------------------CCcEEEEEECCC-C-EEE-----EeeccccccceEEcCCCCEE
Confidence             00000                               012233333221 1 110     11122345789999999877


Q ss_pred             EEE-eCCCcEEEEEcc-CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942        336 ASG-SLDKTVKVWSTT-GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       336 ~~~-~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                      +.+ +.++.|.+|++. ..+.....                           +....+.....                 
T Consensus       164 yv~~~~~~~i~~~~~d~~~G~~~~~---------------------------~~~~~~~~~~~-----------------  199 (297)
T 3g4e_A          164 YYIDSLSYSVDAFDYDLQTGQISNR---------------------------RSVYKLEKEEQ-----------------  199 (297)
T ss_dssp             EEEEGGGTEEEEEEECTTTCCEEEE---------------------------EEEEECCGGGC-----------------
T ss_pred             EEecCCCCcEEEEeccCCCCcccCc---------------------------EEEEECCCCCC-----------------
Confidence            554 456889999874 12221100                           00000100000                 


Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe-cCCCEEEEEeC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI-NKGTQIVSTGA  474 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~  474 (537)
                      ....++++++|++.++...++.|..||..+++.+..+..+...+++++|. |+++.|+.++.
T Consensus       200 ~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          200 IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence            45678899999888888778899999999899999988777789999998 88887765553

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.19  E-value=1.2e-09  Score=103.80  Aligned_cols=253  Identities=6%  Similarity=-0.017  Sum_probs=147.0

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc--eEEe
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS--LLHY   81 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~   81 (537)
                      ....|+|+  ++++++++...++.|+.||.++++............ +  .+.|        ++..++++..++  .|.+
T Consensus       132 ~P~~la~d--~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-i--a~~~--------~g~~l~~~d~~~~~~I~~  198 (409)
T 3hrp_A          132 YMWGIAAV--GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-P--AVTK--------DKQRVYSIGWEGTHTVYV  198 (409)
T ss_dssp             CEEEEEEC--STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-C--EECT--------TSSEEEEEBSSTTCEEEE
T ss_pred             CceEEEEe--CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-e--eEec--------CCCcEEEEecCCCceEEE
Confidence            35688898  888888888888999999999887666554433333 4  5567        445666665544  7888


Q ss_pred             eeccceehhhhc----C-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE----eecchhhh
Q psy10942         82 YETSAVKELYQH----G-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ----FVGFSDEI  152 (537)
Q Consensus        82 wd~~~~~~~~~~----~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~v  152 (537)
                      ++..++.....+    . ....+.+++++|++..|+++..++.|+.||..++           .....    ..++...-
T Consensus       199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~-----------~~~~~~~~~~~g~~~~~  267 (409)
T 3hrp_A          199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ-----------EVTLIKQLELSGSLGTN  267 (409)
T ss_dssp             EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC-----------CEEEEEECCCCSCCCCS
T ss_pred             EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC-----------CEEEEecccccCCCCCC
Confidence            888765543333    2 2356888999995555555777888999999872           22111    11222222


Q ss_pred             -h-hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc-cc---------
Q psy10942        153 -L-DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE-RL---------  220 (537)
Q Consensus       153 -~-~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~-~~---------  220 (537)
                       . .++|+ +++..|+++....   +.|                 +.|+.       ......+.... ..         
T Consensus       268 P~~~ia~~-p~~g~lyv~d~~~---~~I-----------------~~~~~-------~g~~~~~~g~~~~~g~~dg~~~~  319 (409)
T 3hrp_A          268 PGPYLIYY-FVDSNFYMSDQNL---SSV-----------------YKITP-------DGECEWFCGSATQKTVQDGLREE  319 (409)
T ss_dssp             SCCEEEEE-TTTTEEEEEETTT---TEE-----------------EEECT-------TCCEEEEEECTTCCSCBCEEGGG
T ss_pred             ccccEEEe-CCCCEEEEEeCCC---CEE-----------------EEEec-------CCCEEEEEeCCCCCCcCCCcccc
Confidence             3 88999 5444554443221   226                 55554       22111121000 00         


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV  299 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i  299 (537)
                      ..  -.....+   +++|+|+++++-. .++.|+  .|+..++.          +..+.++..          ..+.   
T Consensus       320 ~~--~~~P~gi---a~d~dG~lyvad~~~~~~I~--~~~~~~G~----------v~~~~g~~~----------~~g~---  369 (409)
T 3hrp_A          320 AL--FAQPNGM---TVDEDGNFYIVDGFKGYCLR--KLDILDGY----------VSTVAGQVD----------VASQ---  369 (409)
T ss_dssp             CB--CSSEEEE---EECTTCCEEEEETTTTCEEE--EEETTTTE----------EEEEEECTT----------CBSC---
T ss_pred             cE--eCCCeEE---EEeCCCCEEEEeCCCCCEEE--EEECCCCE----------EEEEeCCCC----------CCCc---
Confidence            11  1346788   8999998777777 778888  88755421          111111100          0000   


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST  349 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~  349 (537)
                         ..+.        .....-.....++++|++.++++-..++.|+.+++
T Consensus       370 ---~~g~--------~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          370 ---IDGT--------PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ---CCBS--------TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             ---CCCC--------hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence               0000        00111245789999999888888778888887765

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.16  E-value=5.9e-10  Score=103.25  Aligned_cols=159  Identities=9%  Similarity=0.004  Sum_probs=111.0

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeee-----eecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLN-----VLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  360 (537)
                      .++++|+.+ .+.+|+++.......     ........+.. |..++|  |+++|+++ .++.|++||+.... ......
T Consensus        50 gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~-~~~~~~  123 (388)
T 1xip_A           50 SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS-EFRTVT  123 (388)
T ss_dssp             TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT-CEEEEE
T ss_pred             CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh-ccCccc
Confidence            467778776 555698654331000     00111223556 999999  89999999 88999999987432 221111


Q ss_pred             ec--------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        361 GH--------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       361 ~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      .+        .-...+++++.||.+.+||+.++....    .                 ...+.+++|||+|  ++.|..
T Consensus       124 ~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~-----------------~~~Vs~v~WSpkG--~~vg~~  180 (388)
T 1xip_A          124 SFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----L-----------------AQNVTSFDVTNSQ--LAVLLK  180 (388)
T ss_dssp             ECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----E-----------------EESEEEEEECSSE--EEEEET
T ss_pred             eeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----c-----------------cCCceEEEEcCCc--eEEEEc
Confidence            11        112238889999999999999876542    1                 1178999999999  778999


Q ss_pred             CCcEEEEECCCcee--eeEe------e---cCCcceEEEEEecCCCEEEEEe
Q psy10942        433 DATIKLWCLTDYVC--LKSL------E---GHDASVLRCHFINKGTQIVSTG  473 (537)
Q Consensus       433 dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~s~~  473 (537)
                      ||.+++|+...++.  ..++      .   +|...|.++.|.+++.++++-.
T Consensus       181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            99999998887765  5555      2   3678899999999999888643

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.15  E-value=4.9e-09  Score=107.21  Aligned_cols=231  Identities=10%  Similarity=-0.029  Sum_probs=133.7

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeee-----ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC-
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPR-----QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD-  294 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~-----~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d-  294 (537)
                      +|  ...+..+   +|||||++||.     |+....|+  +||+.++................+. ++  +.|+.++.+ 
T Consensus       126 ~~--~~~l~~~---~~SpDg~~lAy~~~~~G~~~~~i~--v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg--~~l~y~~~~~  195 (693)
T 3iuj_A          126 DG--TTALDQL---SFSRDGRILAYSLSLAGSDWREIH--LMDVESKQPLETPLKDVKFSGISWL-GN--EGFFYSSYDK  195 (693)
T ss_dssp             TS--CCEEEEE---EECTTSSEEEEEEECSSCCEEEEE--EEETTTCSEEEEEEEEEESCCCEEE-TT--TEEEEEESSC
T ss_pred             CC--cEEEEEE---EECCCCCEEEEEEecCCCceEEEE--EEECCCCCCCccccCCceeccEEEe-CC--CEEEEEEecC
Confidence            45  6678888   99999999983     44446789  9999886422111000000112222 21  345555554 


Q ss_pred             ------------CeEEEEECCCCceeeeeecccccc-cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEccCCceeeE
Q psy10942        295 ------------KTVKVWSTTGGLKLLNVLRGHKKG-HEKDINCVTVSPNDKLLASGSL----DKTVKVWSTTGGLKLLN  357 (537)
Q Consensus       295 ------------~~i~i~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~d~~~~~~~~~  357 (537)
                                  ..|++|++.+....... ...... |......+.|+|||++|+....    ++.|+++|+........
T Consensus       196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~-v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~  274 (693)
T 3iuj_A          196 PDGSELSARTDQHKVYFHRLGTAQEDDRL-VFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL  274 (693)
T ss_dssp             CC-------CCCCEEEEEETTSCGGGCEE-EESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred             cccccccccCCCcEEEEEECCCCcccceE-EEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence                        34999998876532111 222233 4556788999999998866442    23677777663222222


Q ss_pred             EEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C---C
Q psy10942        358 VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G---D  433 (537)
Q Consensus       358 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~---d  433 (537)
                      .+..+.+                                                 ..... +++++..|+..+ .   .
T Consensus       275 ~l~~~~~-------------------------------------------------~~~~~-~~~~g~~l~~~t~~~~~~  304 (693)
T 3iuj_A          275 TVQGDLD-------------------------------------------------ADVSL-VDNKGSTLYLLTNRDAPN  304 (693)
T ss_dssp             EEECSSS-------------------------------------------------SCEEE-EEEETTEEEEEECTTCTT
T ss_pred             EEeCCCC-------------------------------------------------ceEEE-EeccCCEEEEEECCCCCC
Confidence            2222211                                                 11111 344444444333 2   3


Q ss_pred             CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEec-CCccceeccCCCCC
Q psy10942        434 ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFD-KHALKIRNSDSEND  507 (537)
Q Consensus       434 g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~  507 (537)
                      +.|..+|+.++..  ...+..|...+.  .|++++++|+....++   .|++|++..+. ...+. .....+        
T Consensus       305 ~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~--------  373 (693)
T 3iuj_A          305 RRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSV--------  373 (693)
T ss_dssp             CEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEE--------
T ss_pred             CEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceE--------
Confidence            6799999987654  345666666665  8999999888766543   68999987544 44443 233445        


Q ss_pred             CccccccceeeecCCCEEEEEe
Q psy10942        508 HKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       508 ~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                         ..+   .++++++.|+...
T Consensus       374 ---~~~---~~~~d~~~l~~~~  389 (693)
T 3iuj_A          374 ---SGF---NGKHDDPALYFGF  389 (693)
T ss_dssp             ---EEC---CCCTTCSCEEEEE
T ss_pred             ---Eee---ecCCCCCEEEEEe
Confidence               566   7788887666543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.15  E-value=1.6e-08  Score=95.43  Aligned_cols=293  Identities=9%  Similarity=-0.021  Sum_probs=170.6

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCC----------cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccc
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLS----------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKI  138 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~----------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~  138 (537)
                      .+++++.++.|..+|..+|+.+......          ..+.+ ....++..+++++.++.|..+|..+           
T Consensus        55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~t-----------  122 (376)
T 3q7m_A           55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSD-----------  122 (376)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTT-----------
T ss_pred             EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCC-----------
Confidence            5666677889999999999987665542          22322 2233456777888899999999998           


Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE  218 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~  218 (537)
                      ++.+................   +..+++++.++.    +                 ..+|.       .+++.....  
T Consensus       123 G~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~----l-----------------~~~d~-------~tG~~~W~~--  169 (376)
T 3q7m_A          123 GTVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQ----L-----------------QALNE-------ADGAVKWTV--  169 (376)
T ss_dssp             CCEEEEEECSSCCCSCCEEE---TTEEEEECTTSE----E-----------------EEEET-------TTCCEEEEE--
T ss_pred             CCEEEEEeCCCceEcCCEEE---CCEEEEEcCCCe----E-----------------EEEEC-------CCCcEEEEE--
Confidence            55555554433222222222   446666665554    6                 66676       666655110  


Q ss_pred             cccCCCcCeEEEEe-ccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc-----eeeeeeCCcc---eEEE
Q psy10942        219 RLGRDELKTVTLLE-RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE-----HGAFYTGGTV---ELLA  289 (537)
Q Consensus       219 ~~~h~~~~~v~~~~-~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v---~~l~  289 (537)
                        ..  ...+.... .......+..++.+..++.+.  .++..++..........+..     .+.......+   ..++
T Consensus       170 --~~--~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~--~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~  243 (376)
T 3q7m_A          170 --NL--DMPSLSLRGESAPTTAFGAAVVGGDNGRVS--AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF  243 (376)
T ss_dssp             --EC--CC-----CCCCCCEEETTEEEECCTTTEEE--EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred             --eC--CCCceeecCCCCcEEECCEEEEEcCCCEEE--EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence              11  11111000 001111245677777788888  88887754333221110000     0000000000   4677


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC------
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK------  363 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------  363 (537)
                      .++.++.+..+|..+++......       ......+..  ++..++.++.++.+..+|.. .++.+-......      
T Consensus       244 ~~~~~g~l~~~d~~tG~~~w~~~-------~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~  313 (376)
T 3q7m_A          244 ALAYNGNLTALDLRSGQIMWKRE-------LGSVNDFIV--DGNRIYLVDQNDRVMALTID-GGVTLWTQSDLLHRLLTS  313 (376)
T ss_dssp             EECTTSCEEEEETTTCCEEEEEC-------CCCEEEEEE--ETTEEEEEETTCCEEEEETT-TCCEEEEECTTTTSCCCC
T ss_pred             EEecCcEEEEEECCCCcEEeecc-------CCCCCCceE--ECCEEEEEcCCCeEEEEECC-CCcEEEeecccCCCcccC
Confidence            78889999999999887654321       122344444  36678888889999999998 444443333111      


Q ss_pred             ---CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        364 ---KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       364 ---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                         .+..++.++.+|.+..+|..+++.+..+......+.                .....  .+..|+.++.+|.|..|+
T Consensus       314 ~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~----------------~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          314 PVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQ----------------TEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBC----------------SCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             CEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcce----------------eCCEE--ECCEEEEEeCCCEEEEEe
Confidence               157788899999999999999988776654222111                00111  245678888999999886

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.14  E-value=2.3e-11  Score=114.15  Aligned_cols=179  Identities=12%  Similarity=0.042  Sum_probs=106.3

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH---  362 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---  362 (537)
                      ..+++++.|+.|+.||..+++.....     ..  +.+.+..+.+++..+++++.|+.|+.||.. .++.+.....+   
T Consensus        10 ~~v~~gs~dg~v~a~d~~tG~~~W~~-----~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~~~~~   81 (369)
T 2hz6_A           10 TLLFVSTLDGSLHAVSKRTGSIKWTL-----KE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPFTIPE   81 (369)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEE-----EC--CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHH
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEe-----cC--CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeeccCcc
Confidence            47888999999999999999876544     11  234444455677788888899999999997 33332222111   


Q ss_pred             -----C---CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942        363 -----K---KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA  434 (537)
Q Consensus       363 -----~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  434 (537)
                           +   .+..+++++.++.++.||..+++.+..+..+..                     ..++|++..+++++.|+
T Consensus        82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---------------------~~~~p~~~~v~~~~~dg  140 (369)
T 2hz6_A           82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---------------------DSLSPSTSLLYLGRTEY  140 (369)
T ss_dssp             HHTTCSCC-----CCCCEEEEEEEEECCC-------------------------------------------EEEEEEEE
T ss_pred             ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---------------------ccccccCCEEEEEecCC
Confidence                 1   355677888899999999999998877654421                     22455778888999999


Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                      .|+.||..+++.+..+..+.  .....++++.   ..+++++.||.|+.||..+|+.+..+...
T Consensus       141 ~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~  202 (369)
T 2hz6_A          141 TITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA  202 (369)
T ss_dssp             EEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred             EEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC
Confidence            99999999998877765321  2223334432   46777889999999999999998877643

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.13  E-value=1.1e-09  Score=111.89  Aligned_cols=69  Identities=7%  Similarity=-0.063  Sum_probs=47.4

Q ss_pred             EEcCCCCEEEEEeCCC---cEEEEECCCceeeeEee-cCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCCCee
Q psy10942        419 NFSPLDRILISSSGDA---TIKLWCLTDYVCLKSLE-GHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKTSTC  488 (537)
Q Consensus       419 ~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~~~~  488 (537)
                      .|+++++.|+....++   .|++|++..+. ...+. ...+.+..+.++++++.|+....+    +.++.||+.+++.
T Consensus       332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          332 TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            6777777777665443   68899987544 34443 244567778888888776655444    7899999987764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.11  E-value=5.6e-09  Score=95.32  Aligned_cols=246  Identities=11%  Similarity=0.020  Sum_probs=140.5

Q ss_pred             cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec-ccc
Q psy10942         97 SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE-YLN  174 (537)
Q Consensus        97 ~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~  174 (537)
                      ......+|+|+|+ ++++...++.|..|+...            + ...+..+...+..++++ ++++ ++++... .. 
T Consensus        45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g------------~-~~~~~~~~~~~~gl~~d-~dG~-l~v~~~~~~~-  108 (305)
T 3dr2_A           45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG------------T-VDVLLDATAFTNGNAVD-AQQR-LVHCEHGRRA-  108 (305)
T ss_dssp             SSEEEEEEEGGGTEEEEEETTTTEEEEEETTS------------C-EEEEEESCSCEEEEEEC-TTSC-EEEEETTTTE-
T ss_pred             cCccCCeEeCCCCEEEEEECCCCEEEEEeCCC------------C-EEEEeCCCCccceeeEC-CCCC-EEEEECCCCE-
Confidence            5678899999998 556666778899998743            2 23444455667889998 5665 4444432 33 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL  253 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~  253 (537)
                         |                 .+|+.       . ++.. +.. ...+.. ...+..+   ++.|+|+++++-..-|...
T Consensus       109 ---v-----------------~~~~~-------~-g~~~~~~~-~~~~~~-~~~~~~i---~~d~dG~l~~td~~~g~~~  155 (305)
T 3dr2_A          109 ---I-----------------TRSDA-------D-GQAHLLVG-RYAGKR-LNSPNDL---IVARDGAIWFTDPPFGLRK  155 (305)
T ss_dssp             ---E-----------------EEECT-------T-SCEEEEEC-EETTEE-CSCCCCE---EECTTSCEEEECCSGGGSC
T ss_pred             ---E-----------------EEECC-------C-CCEEEEEe-ccCCCc-cCCCCCE---EECCCCCEEEeCcCCCccc
Confidence               6                 55554       3 2222 210 000110 2345667   8889988777632212221


Q ss_pred             eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942        254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK  333 (537)
Q Consensus       254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  333 (537)
                        -++-....  .                        ....+.|..+|..+++...      +. .......++|+||++
T Consensus       156 --~~~~~~~~--~------------------------~~~~~~v~~~d~~~g~~~~------~~-~~~~p~gl~~spdg~  200 (305)
T 3dr2_A          156 --PSQGCPAD--P------------------------ELAHHSVYRLPPDGSPLQR------MA-DLDHPNGLAFSPDEQ  200 (305)
T ss_dssp             --GGGSCCCC--C------------------------SSSCEEEEEECSSSCCCEE------EE-EESSEEEEEECTTSS
T ss_pred             --cccccccc--c------------------------ccCCCeEEEEcCCCCcEEE------Ee-cCCCCcceEEcCCCC
Confidence              11110000  0                        0001346666665544211      11 223467899999999


Q ss_pred             EEEEEeCC------CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        334 LLASGSLD------KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       334 ~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      .|+.+...      +.|.+|++... . +......                 .+.           ...           
T Consensus       201 ~lyv~~~~~~~~~~~~i~~~~~~~~-~-l~~~~~~-----------------~~~-----------~~~-----------  239 (305)
T 3dr2_A          201 TLYVSQTPEQGHGSVEITAFAWRDG-A-LHDRRHF-----------------ASV-----------PDG-----------  239 (305)
T ss_dssp             EEEEEECCC---CCCEEEEEEEETT-E-EEEEEEE-----------------ECC-----------SSS-----------
T ss_pred             EEEEEecCCcCCCCCEEEEEEecCC-C-ccCCeEE-----------------EEC-----------CCC-----------
Confidence            88887665      67888887732 2 1110000                 000           000           


Q ss_pred             CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942        408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL  477 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  477 (537)
                            ....++++++|++.++ ..+ .|.+|+. +++.+..+..+. .+.+++|+++++.|+.++.++.
T Consensus       240 ------~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l  299 (305)
T 3dr2_A          240 ------LPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL  299 (305)
T ss_dssp             ------CCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred             ------CCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence                  2344778899985544 444 5999997 567777777554 5889999999988888877653

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.02  E-value=3.1e-09  Score=98.24  Aligned_cols=127  Identities=7%  Similarity=-0.069  Sum_probs=82.5

Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCe--eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-------
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTST--CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-------  432 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------  432 (537)
                      .+++..++..+. +.+.+.|.....  .+..+...........+.|.       +...++++||++.++++..       
T Consensus       219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~-------g~~~v~~s~dg~~lyV~~~~~~~~~~  290 (368)
T 1mda_H          219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSA-------GFQMVAKLKNTDGIMILTVEHSRSCL  290 (368)
T ss_dssp             ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC-------SSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred             cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccC-------cceeeEEcCCCCEEEEEeccccCccc
Confidence            344455555555 899999986542  22222211000000001111       2223679999888876543       


Q ss_pred             --CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEecCCcc
Q psy10942        433 --DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTFDKHAL  497 (537)
Q Consensus       433 --dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~  497 (537)
                        ++.+.++|+.+++.+..+.... ....++|+||++ ++++.. .++.|.++|+.+++.+..+.....
T Consensus       291 ~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~  358 (368)
T 1mda_H          291 AAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG  358 (368)
T ss_dssp             SCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred             ccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence              2356799999999998887543 578999999998 556666 589999999999999999876544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.02  E-value=6.4e-08  Score=89.82  Aligned_cols=222  Identities=11%  Similarity=0.079  Sum_probs=137.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccc-----c-c-cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK-----K-G-HEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGG  352 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-----~-~-~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~  352 (537)
                      .+++.+..++.|.++|+.+.....++ ....     . . ....-..+..+|+| +++++..+      +.+.++|.. +
T Consensus        97 ~l~v~~l~s~~I~viD~~t~p~~p~~-~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~-T  173 (462)
T 2ece_A           97 FLIVPGLRSSRIYIIDTKPNPREPKI-IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY-S  173 (462)
T ss_dssp             EEEEEBTTTCCEEEEECCSCTTSCEE-EEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT-T
T ss_pred             EEEEccCCCCeEEEEECCCCCCCcee-eeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC-C
Confidence            46777888899999998754211111 1111     0 1 11234567889999 77766555      789999988 5


Q ss_pred             ceeeEEEE-------------ecCCCCEEEEEc-------------------CCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942        353 LKLLNVLR-------------GHKKGTQIVSTG-------------------ADGLLKLWSIKTSTCVSTFDKHALKIWT  400 (537)
Q Consensus       353 ~~~~~~~~-------------~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~  400 (537)
                      .+.+..+.             .+++++.+++..                   .+.+|.+||+.+++.+.++.......  
T Consensus       174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~--  251 (462)
T 2ece_A          174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR--  251 (462)
T ss_dssp             CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE--
T ss_pred             CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC--
Confidence            66665554             245577777774                   37899999999988777765431100  


Q ss_pred             EEEecCCCceEEeeeeEEEE--cCCCCEEEEEeC------CCcEEEEECCCcee--eeEe--ecC---------------
Q psy10942        401 LAITKDENQIITGGVWFVNF--SPLDRILISSSG------DATIKLWCLTDYVC--LKSL--EGH---------------  453 (537)
Q Consensus       401 ~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~------dg~i~i~d~~~~~~--~~~~--~~~---------------  453 (537)
                                   ....+.|  +|+++++.++..      +++|.+|....++.  ...+  ...               
T Consensus       252 -------------~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~  318 (462)
T 2ece_A          252 -------------MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA  318 (462)
T ss_dssp             -------------EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred             -------------ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence                         3334444  888888887764      56777765544321  1111  100               


Q ss_pred             -CcceEEEEEecCCCEEEEEeC-CCcEEEEECCC---CeeEEEecCCccceeccC----CCCCCccccccceeeecCCCE
Q psy10942        454 -DASVLRCHFINKGTQIVSTGA-DGLLKLWSIKT---STCVSTFDKHALKIRNSD----SENDHKGFGLPRQLCSRNSDC  524 (537)
Q Consensus       454 -~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~---~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~s~~~~~  524 (537)
                       ......+.+|+||++|+++.. .+.|.+||+..   .+++..+..... +...+    ......+..+   +++|||++
T Consensus       319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~-~~~~~~~~G~~~~ggPr~~---~lSpDGk~  394 (462)
T 2ece_A          319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI-FHRADHPAGHKLTGAPQML---EISRDGRR  394 (462)
T ss_dssp             ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTT-TTCBCCTTSCCCCSCCCCE---EECTTSSE
T ss_pred             CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCe-eccccccccccCCCCCCEE---EEcCCCCE
Confidence             234688999999999988775 68899999853   355544432200 00000    0001123677   99999999


Q ss_pred             EEEEe
Q psy10942        525 EYRGG  529 (537)
Q Consensus       525 l~s~~  529 (537)
                      |+++.
T Consensus       395 LyVaN  399 (462)
T 2ece_A          395 VYVTN  399 (462)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99887

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.00  E-value=1.7e-07  Score=81.72  Aligned_cols=190  Identities=14%  Similarity=0.131  Sum_probs=124.9

Q ss_pred             CeEEEEEcCCCCEEEEEeC--CCcEEEEEccCCceeeEEEEecC----------CCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        322 DINCVTVSPNDKLLASGSL--DKTVKVWSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~----------~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                      ....++|+|++.++++.+.  ++.|+++|+. .++.+..+....          .+...++...++.+.++|..+.+.+.
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~  100 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQ-TGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK  100 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECC-CCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence            3689999998754444443  5799999999 666766665322          13444555668999999999999888


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEEec
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHFIN  464 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~s~  464 (537)
                      ++... .        |.       +   ..+++|++.++++..++.|.++|..+.+.+..+.-..     ..++.+.|. 
T Consensus       101 ~i~~g-~--------~~-------g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-  160 (266)
T 2iwa_A          101 NFTHQ-M--------KD-------G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-  160 (266)
T ss_dssp             EEECC-S--------SS-------C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred             EEECC-C--------CC-------e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence            77533 1        11       1   2244567767777778999999999988887776321     136788888 


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee--ccCCCCCCccccccceeeecCCCEEEEEe-CCCCEE
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR--NSDSENDHKGFGLPRQLCSRNSDCEYRGG-WSPQVV  535 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~i~  535 (537)
                      ++...+....++.|.+.|..+++.+..+......-.  .........+..+   +|+|+++.|++++ ..+.+.
T Consensus       161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI---a~~~~~~~lfVTgk~~~~v~  231 (266)
T 2iwa_A          161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI---AWDQENKRIFVTGKLWPKLF  231 (266)
T ss_dssp             TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE---EEETTTTEEEEEETTCSEEE
T ss_pred             CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEE---EEcCCCCEEEEECCCCCeEE
Confidence            775555555678999999999999988864210000  0000000112566   9999998776655 444443

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.00  E-value=8.4e-08  Score=82.39  Aligned_cols=183  Identities=13%  Similarity=0.137  Sum_probs=124.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEecCC---------CCE-EEEEcCCCcEEEEECCCCeeee
Q psy10942        322 DINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRGHKK---------GTQ-IVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~---------~~~-l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                      ....+.|+ ++.++.+.+.+|  .|+.+|+. +++.+..+...+.         ++. .+....++.+.+||..+.+.+.
T Consensus        44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~  121 (262)
T 3nol_A           44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR  121 (262)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTEEEEEEECTT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred             ccceEEEE-CCEEEEECCCCCCceEEEEECC-CCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence            35889998 676667776665  89999999 6777766654432         333 4444568899999999999988


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--C---cceEEEEEec
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--D---ASVLRCHFIN  464 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~s~  464 (537)
                      ++.....                 +   ..+++|++.|+....++.|.++|..+.+.+..+...  .   ..++.+.|. 
T Consensus       122 ti~~~~e-----------------G---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-  180 (262)
T 3nol_A          122 SFNYDGE-----------------G---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-  180 (262)
T ss_dssp             EEECSSC-----------------C---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred             EEECCCC-----------------c---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence            8765321                 1   123356666777666788999999998888877642  1   234567887 


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceecc-CCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNS-DSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      +|+..+..-.++.|.+.|.++|+.+..+....-.-... ........+.+   +++|+++.|++.+.
T Consensus       181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGI---A~dp~~~~lfVTGK  244 (262)
T 3nol_A          181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGI---AWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEE---EEETTTTEEEEEET
T ss_pred             CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEE---EEcCCCCEEEEECC
Confidence            67655555568899999999999998886532110000 00011122556   99999998887764

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.95  E-value=8.6e-08  Score=97.13  Aligned_cols=226  Identities=8%  Similarity=0.043  Sum_probs=143.2

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE-EEEcCCCCEEEEEeC------CCcEEEEEccCCceeeEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC-VTVSPNDKLLASGSL------DKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~  358 (537)
                      ..++.++.|+.|..+|..+++................+.+ ..+  .+..+++++.      ++.|+.+|.. +++.+-.
T Consensus       129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~-tG~~~W~  205 (677)
T 1kb0_A          129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAE-TGERKWR  205 (677)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEE
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECC-CCcEEEE
Confidence            5788889999999999999987665421100000011111 111  2345555543      6899999988 4444433


Q ss_pred             EEe------------------------------------------cCCCCEEEEEcCCC-------------------cE
Q psy10942        359 LRG------------------------------------------HKKGTQIVSTGADG-------------------LL  377 (537)
Q Consensus       359 ~~~------------------------------------------~~~~~~l~~~~~d~-------------------~i  377 (537)
                      +..                                          .+++..++.+..++                   .|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv  285 (677)
T 1kb0_A          206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI  285 (677)
T ss_dssp             EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred             eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence            321                                          22355666666553                   48


Q ss_pred             EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC---CEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942        378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD---RILISSSGDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                      ..+|..+++.+..++......+.... +.       ...-+....+|   +.++.++.+|.++++|..+++.+..++...
T Consensus       286 ~AlD~~TG~~~W~~~~~~~d~wd~~~-~~-------~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~  357 (677)
T 1kb0_A          286 VALDPDTGKYKWHYQETPGDNWDYTS-TQ-------PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP  357 (677)
T ss_dssp             EEECTTTCCEEEEEESSTTCCSCCCC-CS-------CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred             EEEECCCCCEEEEEecCCCccccccc-CC-------CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence            89999999988776542211110000 00       11112233466   678899999999999999999887765221


Q ss_pred             c-----------ce------------------------EEEEEecCCCEEEEEeC-------------------------
Q psy10942        455 A-----------SV------------------------LRCHFINKGTQIVSTGA-------------------------  474 (537)
Q Consensus       455 ~-----------~v------------------------~~~~~s~~~~~l~s~~~-------------------------  474 (537)
                      .           ++                        ..++++|++.++++...                         
T Consensus       358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~  437 (677)
T 1kb0_A          358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG  437 (677)
T ss_dssp             CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred             cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence            0           01                        15789999888877543                         


Q ss_pred             ------------------CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        475 ------------------DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       475 ------------------dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                                        .|.|..||+.+++.+..+... .+.           .+.   .++.++.+++.++.||.+++
T Consensus       438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~-----------~~g---~~~~~g~~v~~g~~dg~l~a  502 (677)
T 1kb0_A          438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPW-----------NGG---TLTTAGNVVFQGTADGRLVA  502 (677)
T ss_dssp             GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSC-----------CCC---EEEETTTEEEEECTTSEEEE
T ss_pred             cccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCC-----------cCc---ceEeCCCEEEEECCCCcEEE
Confidence                              277999999999998887643 234           455   67888999999999999887


Q ss_pred             C
Q psy10942        537 Y  537 (537)
Q Consensus       537 W  537 (537)
                      |
T Consensus       503 ~  503 (677)
T 1kb0_A          503 Y  503 (677)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.95  E-value=1.6e-05  Score=82.62  Aligned_cols=426  Identities=10%  Similarity=-0.000  Sum_probs=216.8

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeee-c--ccc-----ccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSY-P--AYE-----SLETCAVFHLSDETESKSGGKTFVLAGGEK   76 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~-~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (537)
                      |++|...  .++..|..+..++-+..||.++++..... .  ...     .+..+  .....       ....+..++.+
T Consensus        68 I~~i~~d--~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i--~~d~~-------~~g~lwi~t~~  136 (781)
T 3v9f_A           68 LNEVYTD--PVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHI--TSSVQ-------AGKGLWVCTYY  136 (781)
T ss_dssp             EEEEEEC--SSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEE--EECSS-------TTSEEEEEESS
T ss_pred             cceEEEc--CCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEE--EecCc-------cCCCEEEEECC
Confidence            6666666  56662555666623999998876643321 1  111     12222  22220       02234445434


Q ss_pred             ceEEeeeccceehhhhc------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec---
Q psy10942         77 SLLHYYETSAVKELYQH------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG---  147 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---  147 (537)
                      +.|..||..+++.....      .....|.++...++|.+.+ ++.++-|..||..+           .+.. .+..   
T Consensus       137 ~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~-----------~~~~-~~~~~~~  203 (781)
T 3v9f_A          137 RGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLND-----------KSVK-HFVHDPQ  203 (781)
T ss_dssp             SCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTT-----------TEEE-EECC---
T ss_pred             CCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCC-----------CceE-eeecCCC
Confidence            44888887665432211      1124688888888886554 56654588888776           2222 1110   


Q ss_pred             -----chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---
Q psy10942        148 -----FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE---  218 (537)
Q Consensus       148 -----~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~---  218 (537)
                           ....|.++...  ..+.|.+++.. .    +                 .+||.       .+.... +....   
T Consensus       204 ~~~~l~~~~i~~i~~d--~~g~lwigt~~-G----l-----------------~~~d~-------~~~~~~~~~~~~~~~  252 (781)
T 3v9f_A          204 NPNSLPGNDVRCIYKD--TNGNIWIGTSK-G----L-----------------ALFNA-------NTETFTNFHNNPGNI  252 (781)
T ss_dssp             -----CCSSEEEEEEC--TTCCEEEEETT-E----E-----------------EEEET-------TTTEEEC--------
T ss_pred             CcccCCCCceeEEEEc--CCCCEEEEeCC-c----H-----------------heECC-------CCCcEEEEEcCCCcc
Confidence                 12346666554  24556677654 3    5                 44554       333222 11000   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---------------cccccceeeeeeCC
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---------------FVPEAEHGAFYTGG  283 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---------------~~~~~~~~~~~~~~  283 (537)
                      ..-.  ...|.++   ...++|.+.+ |+..+-+.  +++...........               ....+..+..... 
T Consensus       253 ~~l~--~~~i~~i---~~d~~g~lWi-gt~~~Gl~--~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~-  323 (781)
T 3v9f_A          253 HGAL--SSYIFSI---KQLKDNKLWI-ATELNGIM--ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSF-  323 (781)
T ss_dssp             ---C--CCCEEEE---EECTTSEEEE-EESSSCEE--EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSS-
T ss_pred             cccc--CceEEEE---EECCCCCEEE-EeCCCCeE--EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCC-
Confidence            0012  4568888   7777776544 55533455  66665432111000               0000001100000 


Q ss_pred             cceEEEEEeCCCeEEEEECCCCceeeeeecc----cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce-----
Q psy10942        284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRG----HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK-----  354 (537)
Q Consensus       284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~-----  354 (537)
                        ..+-.|+.++-|..++..+.....-....    ........|.++...++|++ ..|+.++-+..++.. ...     
T Consensus       324 --g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~-~~~~~~~~  399 (781)
T 3v9f_A          324 --NNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENG-KRVAIYNK  399 (781)
T ss_dssp             --CCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETT-EEEEECC-
T ss_pred             --CCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECC-CCeEEEcc
Confidence              34556666777888887655421110000    01112356999999888765 455655668888865 211     


Q ss_pred             --------eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCE
Q psy10942        355 --------LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRI  426 (537)
Q Consensus       355 --------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~  426 (537)
                              .+..+....++. +..++.++-+..+|..+++....... .              +....|.++...+++++
T Consensus       400 ~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~-~--------------~~~~~v~~i~~d~~g~l  463 (781)
T 3v9f_A          400 ENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELE-K--------------NELLDVRVFYEDKNKKI  463 (781)
T ss_dssp             ----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCST-T--------------TCCCCEEEEEECTTSEE
T ss_pred             CCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccC-C--------------CCCCeEEEEEECCCCCE
Confidence                    122222333333 44455556677777766643222110 0              00116777888887765


Q ss_pred             EEEEeCCCcEEEEECCCceeeeEeecC-----CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC----cc
Q psy10942        427 LISSSGDATIKLWCLTDYVCLKSLEGH-----DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH----AL  497 (537)
Q Consensus       427 l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~----~~  497 (537)
                      .+ |+. +.|..||..+++........     ...|.++...++|.+.+. +.++-+..||..+++.. .+...    ..
T Consensus       464 wi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~  539 (781)
T 3v9f_A          464 WI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVR-KFNQYEGFCSN  539 (781)
T ss_dssp             EE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEE-EECTTTTCSCS
T ss_pred             EE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEE-EccCCCCCCCC
Confidence            54 445 56889998775543322211     356899999988876654 44344788998766543 33221    12


Q ss_pred             ceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        498 KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       498 ~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      .|           .++   ...++|++.++.. +|.
T Consensus       540 ~i-----------~~i---~~d~~g~lWi~T~-~Gl  560 (781)
T 3v9f_A          540 TI-----------NQI---YRSSKGQMWLATG-EGL  560 (781)
T ss_dssp             CE-----------EEE---EECTTSCEEEEET-TEE
T ss_pred             ee-----------EEE---EECCCCCEEEEEC-CCc
Confidence            33           555   7777787665543 444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.93  E-value=1e-07  Score=88.07  Aligned_cols=202  Identities=17%  Similarity=0.041  Sum_probs=131.0

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH---  362 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---  362 (537)
                      ..+..++.++.+..+|.. ++.....     ......+.++...+++. +..++.++.+..+|.. +. ........   
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g~~~~~~-----~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~-~~~~~~~~~~~  178 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-GTEKWRF-----KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT-EKWRFKTNDAI  178 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-SCEEEEE-----ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC-EEEEEECSSCC
T ss_pred             CEEEEEecCCEEEEEcCC-CCEEEEE-----cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC-EeEEEecCCCc
Confidence            467778888999999988 5543222     22333456667777776 5567778889999987 33 32222221   


Q ss_pred             -------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942        363 -------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT  435 (537)
Q Consensus       363 -------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  435 (537)
                             .++. +..++  +.+..+| .+++....+.....                 .+.++..++++.+ ..++.++.
T Consensus       179 ~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~-----------------~~~~~~~~~~g~l-~v~t~~~g  236 (330)
T 3hxj_A          179 TSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYW-----------------TVTRPAISEDGTI-YVTSLDGH  236 (330)
T ss_dssp             CSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEECCSSC-----------------CCSCCEECTTSCE-EEEETTTE
T ss_pred             eeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCc-----------------ceeceEECCCCeE-EEEcCCCe
Confidence                   2233 44444  7888888 66666555543322                 4566677777754 44566788


Q ss_pred             EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942        436 IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       436 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                      |..+|. +++.+..+......+..+...+++ .|..++.+|.|..+|. +++.+..+......+           .++  
T Consensus       237 l~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~-----------~~~--  300 (330)
T 3hxj_A          237 LYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWII-----------ATP--  300 (330)
T ss_dssp             EEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCC-----------SCC--
T ss_pred             EEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccc-----------cce--
Confidence            888874 566666666544445556666565 5667788888999996 787777766555555           666  


Q ss_pred             eeeecCCCEEEEEeCCCCEEe
Q psy10942        516 QLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       516 ~~~s~~~~~l~s~~~dg~i~v  536 (537)
                       ...++|++ ..++.+|.+++
T Consensus       301 -~~d~~g~l-~~gt~~G~~~~  319 (330)
T 3hxj_A          301 -VIDENGTI-YFGTRNGKFYA  319 (330)
T ss_dssp             -EECTTCCE-EEECTTSCEEE
T ss_pred             -EEcCCCEE-EEEcCCCeEEE
Confidence             77777765 45788888865

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.92  E-value=3.9e-07  Score=87.81  Aligned_cols=229  Identities=12%  Similarity=0.026  Sum_probs=138.3

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE-c-CCCCEEEEEeC------------------CCcEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV-S-PNDKLLASGSL------------------DKTVK  345 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~~------------------d~~i~  345 (537)
                      ..++....++.|.+.|+.+.+....+   .+. .......+++ + |+++++++++.                  ++.+.
T Consensus       103 ~lfVnd~~~~rVavIdl~t~~~~~ii---~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A          103 FLFMNDKANTRVARVRCDVMKCDAIL---EIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEE---ECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCceEeeEE---eCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            34555556778999999998754321   111 2235778887 5 99999998852                  35788


Q ss_pred             EEEccCCceeeEEEEe---------cCCCCEEEEEcCCC---------------cEEEEECCCCeeeeeeccCC---cce
Q psy10942        346 VWSTTGGLKLLNVLRG---------HKKGTQIVSTGADG---------------LLKLWSIKTSTCVSTFDKHA---LKI  398 (537)
Q Consensus       346 i~d~~~~~~~~~~~~~---------~~~~~~l~~~~~d~---------------~i~i~d~~~~~~~~~~~~~~---~~i  398 (537)
                      +.|.. ..+...++..         .+++.++++.+.+.               .+.+.|....+.... .+..   ..|
T Consensus       179 vID~~-t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~-~Gk~~~i~~V  256 (595)
T 1fwx_A          179 AVDAD-KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA-AGDYQELNGV  256 (595)
T ss_dssp             EEETT-TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH-HTCSEEETTE
T ss_pred             EEECC-CCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc-CCCeeEECcE
Confidence            89988 5566555443         34577777766542               345555432110000 0000   112


Q ss_pred             EEEEEecC-CCc-eE---E-eeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCce------------eeeEeecCCcceEE
Q psy10942        399 WTLAITKD-ENQ-II---T-GGVWFVNFSPLDRILISSS-GDATIKLWCLTDYV------------CLKSLEGHDASVLR  459 (537)
Q Consensus       399 ~~~~~~~~-~~~-~~---~-~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~v~~  459 (537)
                      .-+..... +.. +.   . ....++.++|||+++++++ .+.+|.++|+.+.+            ....+.. ......
T Consensus       257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h  335 (595)
T 1fwx_A          257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLH  335 (595)
T ss_dssp             EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEE
T ss_pred             EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcce
Confidence            11111110 111 10   1 1467799999999888776 57899999998753            2334432 234688


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECCC----------CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        460 CHFINKGTQIVSTGADGLLKLWSIKT----------STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       460 ~~~s~~~~~l~s~~~dg~v~vwd~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      ++|+|+|...++.-.|+.|.+||+++          .+.+..+..|..+-...      ...++   .++|||++|+++.
T Consensus       336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~------~~~g~---t~~~DGk~l~~~N  406 (595)
T 1fwx_A          336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK------TVMGE---TLDATNDWLVCLS  406 (595)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE------ETTTT---STTCCSSEEEEEE
T ss_pred             EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce------eccce---EeCCCCCEEEEcC
Confidence            99999994444556699999999977          56777777664421000      00345   7899999999875


Q ss_pred             C
Q psy10942        530 W  530 (537)
Q Consensus       530 ~  530 (537)
                      .
T Consensus       407 k  407 (595)
T 1fwx_A          407 K  407 (595)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.92  E-value=1.3e-05  Score=83.29  Aligned_cols=396  Identities=11%  Similarity=0.067  Sum_probs=201.3

Q ss_pred             eeeeeeeccC--CcceEEEecCcceEEEEEcCccceeeeecc------ccccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942          5 VTCFDVIPQI--TSEFSVHCGRDKVLFTWDLSSRKQLRSYPA------YESLETCAVFHLSDETESKSGGKTFVLAGGEK   76 (537)
Q Consensus         5 V~~~~~~~~~--~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (537)
                      |.++...  .  ++.+.+....+| |..+|.++++.......      ...+..+  ...+        ++. +..++.+
T Consensus       117 i~~i~~d--~~~~g~lwi~t~~~g-l~~~~~~~~~~~~~~~~~~~~l~~~~i~~i--~~d~--------~g~-lwigt~~  182 (781)
T 3v9f_A          117 VTHITSS--VQAGKGLWVCTYYRG-IEYLDIATGKFTHYNKSTVPALPSEQTWTA--TEAE--------DGK-LYIGHVE  182 (781)
T ss_dssp             EEEEEEC--SSTTSEEEEEESSSC-EEEEETTTTEEEEESTTTCTTCSCCCEEEE--EEEE--------TTE-EEEEETT
T ss_pred             ceEEEec--CccCCCEEEEECCCC-eeEEECCCCeEEeeccCcccCCCccceEEE--EECC--------CCC-EEEEecC
Confidence            5565555  4  555444332455 88899877654332110      1112222  2223        333 4445545


Q ss_pred             ceEEeeeccceehhhhc--------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-
Q psy10942         77 SLLHYYETSAVKELYQH--------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-  147 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~--------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-  147 (537)
                      +.|..||..+++.....        .....|.++...++|.+.+ ++.+ -+.+||..++           +....... 
T Consensus       183 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~-----------~~~~~~~~~  249 (781)
T 3v9f_A          183 GGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTE-----------TFTNFHNNP  249 (781)
T ss_dssp             TEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTT-----------EEEC-----
T ss_pred             CCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCC-----------cEEEEEcCC
Confidence            45888987765432211        0124689998888887554 4555 5888997762           22111110 


Q ss_pred             ------chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccc----
Q psy10942        148 ------FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHN----  216 (537)
Q Consensus       148 ------~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~----  216 (537)
                            ....|.++...  .++.|.+++..+.    |                 .++|.       .+.... +..    
T Consensus       250 ~~~~~l~~~~i~~i~~d--~~g~lWigt~~~G----l-----------------~~~~~-------~~~~~~~~~~~~f~  299 (781)
T 3v9f_A          250 GNIHGALSSYIFSIKQL--KDNKLWIATELNG----I-----------------MILDL-------QQNQFLLPEQIRFE  299 (781)
T ss_dssp             ------CCCCEEEEEEC--TTSEEEEEESSSC----E-----------------EEEET-------TCC---------CE
T ss_pred             CccccccCceEEEEEEC--CCCCEEEEeCCCC----e-----------------EEECC-------CCCeeeeeeccccc
Confidence                  12346666654  3455677765332    4                 22232       111111 000    


Q ss_pred             ------cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc----------cccccceeeee
Q psy10942        217 ------TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI----------FVPEAEHGAFY  280 (537)
Q Consensus       217 ------~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~----------~~~~~~~~~~~  280 (537)
                            ....-.  ...|.++   ...++|.+- .|+.++-+.  .++...........          ....+..+...
T Consensus       300 ~~~~~~~~~~l~--~~~v~~i---~~D~~g~lW-igt~~~Gl~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d  371 (781)
T 3v9f_A          300 FIREGDNNYSLS--NASARYI---FQDSFNNIW-IGTWGGGIN--FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDD  371 (781)
T ss_dssp             EECBCSSTTSBS--SSCEEEE---EECSSCCEE-EEEBSSCEE--EECSSCCSCEEEC----CCCSSCCSSSCEEEEEEC
T ss_pred             cccCCCCCCCCC--CCeEEEE---EEeCCCCEE-EEecCCeEE--EeCCCCCcceeeccCccccccCCCCCcceEEEEEc
Confidence                  000012  5678898   777877644 455455566  66665432111100          00001111111


Q ss_pred             eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------
Q psy10942        281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG--------  352 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------  352 (537)
                      ..   ..+..|+.++-|..|+..++.... . ..........|.++...+++++.+ |+.++-+..++....        
T Consensus       372 ~~---g~lWigt~~~Gl~~~~~~~~~~~~-~-~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~  445 (781)
T 3v9f_A          372 GQ---GKLWIGTDGGGINVFENGKRVAIY-N-KENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELE  445 (781)
T ss_dssp             TT---SCEEEEEBSSCEEEEETTEEEEEC-C------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCST
T ss_pred             CC---CCEEEEeCCCcEEEEECCCCeEEE-c-cCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccC
Confidence            11   345566666678888876543211 0 110122346799999888886555 666666888877521        


Q ss_pred             ---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942        353 ---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS  429 (537)
Q Consensus       353 ---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  429 (537)
                         ...+..+....++. +..++. +-+..+|..+++..........            .+....+.++...++|++.+.
T Consensus       446 ~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~i~~d~~g~lWig  511 (781)
T 3v9f_A          446 KNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNS------------QLLENFVRSIAQDSEGRFWIG  511 (781)
T ss_dssp             TTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTS------------SCSCSCEEEEEECTTCCEEEE
T ss_pred             CCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCccc------------ccccceeEEEEEcCCCCEEEE
Confidence               11233333334444 334444 4577888776543222111100            001126788888888886654


Q ss_pred             EeCCCcEEEEECCCceeeeEeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        430 SSGDATIKLWCLTDYVCLKSLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       430 ~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                       +.++.+..||..+++.. .+..    ....|.++...++|.+.++. .+|.+..||..+++.
T Consensus       512 -t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~  571 (781)
T 3v9f_A          512 -TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY  571 (781)
T ss_dssp             -ESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred             -EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence             44345788887765433 2321    13468899988888766654 466558898876653

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.91  E-value=4.5e-08  Score=94.20  Aligned_cols=142  Identities=7%  Similarity=-0.046  Sum_probs=94.3

Q ss_pred             eEEEecCcceEEEEEcCccceeeeeccccccceeee---------E------------------eecCcc---ccccC--
Q psy10942         18 FSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAV---------F------------------HLSDET---ESKSG--   65 (537)
Q Consensus        18 ~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~---------~------------------~~~~~~---~~~~~--   65 (537)
                      -|.|||..|.++|+-+-++++++.+|.+.+-...++         +                  ..+.+-   -..|.  
T Consensus        17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~   96 (595)
T 1fwx_A           17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   96 (595)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred             EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence            378889999999999999999998885544322100         0                  000000   00111  


Q ss_pred             ---CcEEEE-EeCccceEEeeeccceehhh--hcCCCcceEEEEE-e-ccccEEEEEeC------------------Cce
Q psy10942         66 ---GKTFVL-AGGEKSLLHYYETSAVKELY--QHGLSSPLVRIVR-S-SVKRMYAVVTA------------------DHN  119 (537)
Q Consensus        66 ---~~~~~~-~~~~~~~i~~wd~~~~~~~~--~~~~~~~v~~~~~-s-~~~~~la~~~~------------------d~~  119 (537)
                         ++++++ +...++.|.+.|+.+.++..  .+.....+..+++ + |++++++++++                  ++.
T Consensus        97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~  176 (595)
T 1fwx_A           97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  176 (595)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred             CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence               344444 45567789999999998777  4444467889998 5 99999988852                  457


Q ss_pred             EEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942        120 ISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY  172 (537)
Q Consensus       120 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~  172 (537)
                      +.+.|.++           ++...++.-.. ....++++ ++++++++++.+.
T Consensus       177 vtvID~~t-----------~~v~~qI~Vgg-~pd~~~~s-pdGk~~~vt~~~s  216 (595)
T 1fwx_A          177 FTAVDADK-----------WEVAWQVLVSG-NLDNCDAD-YEGKWAFSTSYNS  216 (595)
T ss_dssp             EEEEETTT-----------TEEEEEEEESS-CCCCEEEC-SSSSEEEEEESCT
T ss_pred             EEEEECCC-----------CeEEEEEEeCC-CccceEEC-CCCCEEEEEecCc
Confidence            88888888           67777766322 35667777 6777776666544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.91  E-value=1e-06  Score=74.98  Aligned_cols=184  Identities=14%  Similarity=0.068  Sum_probs=124.0

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCC--CcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCee
Q psy10942        320 EKDINCVTVSPNDKLLASGSLD--KTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTC  387 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~  387 (537)
                      ......+.|++ +.++.+.+.+  +.|+.+|+. +++.+..+.....          +........++.+.+||..+.+.
T Consensus        20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-TGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP   97 (243)
T ss_dssp             TCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred             ccccccEEEEC-CEEEEECCCCCCceEEEEECC-CCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence            34577899986 5555665554  489999999 6777776654432          34445556789999999999999


Q ss_pred             eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEE
Q psy10942        388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHF  462 (537)
Q Consensus       388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~  462 (537)
                      +.++.....                  -..++  ++++.|+.+..++.|.++|..+.+.+.+++-..     ..++.+.|
T Consensus        98 ~~ti~~~~~------------------Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~  157 (243)
T 3mbr_X           98 RARFRYPGE------------------GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW  157 (243)
T ss_dssp             EEEEECSSC------------------CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred             EEEEeCCCC------------------ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence            988865431                  12233  456667777778999999999988888776422     24566777


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccC---CCCCCccccccceeeecCCCEEEEEeC
Q psy10942        463 INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSD---SENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      . +|+..+..-.+..|.+.|.++|+.+..+....-.- ...   .......+.+   +++|+++.|++.+.
T Consensus       158 ~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~-~~~~~~~~~~~vlNGI---A~d~~~~~lfVTGK  223 (243)
T 3mbr_X          158 V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVP-DADALTDSTNDVLNGI---AFDAEHDRLFVTGK  223 (243)
T ss_dssp             E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGST-TTTSCCCTTSSCEEEE---EEETTTTEEEEEET
T ss_pred             e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcc-ccccccCCcCCceEEE---EEcCCCCEEEEECC
Confidence            6 66655555567899999999999998876431100 000   0011122556   99999888877664

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.91  E-value=6.7e-10  Score=104.12  Aligned_cols=182  Identities=7%  Similarity=-0.041  Sum_probs=102.2

Q ss_pred             ccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh
Q psy10942         12 PQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY   91 (537)
Q Consensus        12 ~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~   91 (537)
                      |.-++..+++++.||.|..||.++|+.+-+++. .++...  ...+        ++..+++++.++.|+.||..+|+.+.
T Consensus         5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~--p~~~--------~g~~~v~~s~dg~l~a~d~~tG~~~w   73 (369)
T 2hz6_A            5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQV--PTHV--------EEPAFLPDPNDGSLYTLGSKNNEGLT   73 (369)
T ss_dssp             ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCC--C-------------CCEEECTTTCCEEEC-----CCSE
T ss_pred             CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceec--ceEc--------CCCEEEEeCCCCEEEEEECCCCceee
Confidence            445778899999999999999999999988776 444333  2233        44567777889999999999998876


Q ss_pred             hcCCCc--ceE-EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         92 QHGLSS--PLV-RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        92 ~~~~~~--~v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      ....+.  .+. +..+. ++..|++++.++.|+.||..+           ++.+..+..+.    ...++ ++++.++++
T Consensus        74 ~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-----------G~~~w~~~~~~----~~~~~-p~~~~v~~~  136 (369)
T 2hz6_A           74 KLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-----------GEKQQTLSSAF----ADSLS-PSTSLLYLG  136 (369)
T ss_dssp             ECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------------------EEEE
T ss_pred             eeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCC-----------CcEEEEecCCC----ccccc-ccCCEEEEE
Confidence            665431  111 11111 345677888899999999998           56665655443    23455 467778888


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC---Cee
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE---DLF  243 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~---~~l  243 (537)
                      +.++.    +                 ..||.       .+++..  +.     .+    .....   .+.++.   ..+
T Consensus       137 ~~dg~----v-----------------~a~d~-------~tG~~~W~~~-----~~----~~~~~---~~~~~~~~~~~v  176 (369)
T 2hz6_A          137 RTEYT----I-----------------TMYDT-------KTRELRWNAT-----YF----DYAAS---LPEDDVDYKMSH  176 (369)
T ss_dssp             EEEEE----E-----------------ECCCS-------SSSSCCCEEE-----EE----EECCB---CCCCCTTCCCCE
T ss_pred             ecCCE----E-----------------EEEEC-------CCCCEEEeEe-----cc----cccCc---cccCCccccceE
Confidence            77766    8                 88898       777765  22     11    12233   444432   567


Q ss_pred             eeccCCCcceeccccccCCC
Q psy10942        244 PRQSMEPSTLEELEKRKTYH  263 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~  263 (537)
                      +.++.+|.+.  .||..++.
T Consensus       177 ~~~~~dg~v~--a~d~~tG~  194 (369)
T 2hz6_A          177 FVSNGDGLVV--TVDSESGD  194 (369)
T ss_dssp             EEEETSCEEE--EECTTTCC
T ss_pred             EEECCCCEEE--EEECCCCc
Confidence            7788899999  99998754

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.86  E-value=3.2e-06  Score=77.66  Aligned_cols=218  Identities=13%  Similarity=-0.036  Sum_probs=127.2

Q ss_pred             eEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        227 TVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       227 ~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                      -..+.   .|+|++ .++++...++.|.  .|+..++.... .........+.....+  ++++ ++. ..|.+||..++
T Consensus        50 ~~egp---~~~~~~~~l~~~d~~~~~i~--~~d~~~~~~~~-~~~~~~v~~i~~~~dg--~l~v-~~~-~gl~~~d~~~g  119 (326)
T 2ghs_A           50 LGEGP---TFDPASGTAWWFNILERELH--ELHLASGRKTV-HALPFMGSALAKISDS--KQLI-ASD-DGLFLRDTATG  119 (326)
T ss_dssp             BEEEE---EEETTTTEEEEEEGGGTEEE--EEETTTTEEEE-EECSSCEEEEEEEETT--EEEE-EET-TEEEEEETTTC
T ss_pred             CCcCC---eEeCCCCEEEEEECCCCEEE--EEECCCCcEEE-EECCCcceEEEEeCCC--eEEE-EEC-CCEEEEECCCC
Confidence            34567   889975 4555666678888  88877642111 1011111122222222  2333 443 45999998877


Q ss_pred             ceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEccCCceee---------EEEEecCCCCEE-
Q psy10942        306 LKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSL------DKTVKVWSTTGGLKLL---------NVLRGHKKGTQI-  368 (537)
Q Consensus       306 ~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~---------~~~~~~~~~~~l-  368 (537)
                      +... + ..... .....+.+++++|+|+++++...      .+.|..++ .  .+..         ..+...++++.+ 
T Consensus       120 ~~~~-~-~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~~~~~~~~~~~~~~i~~s~dg~~ly  194 (326)
T 2ghs_A          120 VLTL-H-AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--GKVTKLFADISIPNSICFSPDGTTGY  194 (326)
T ss_dssp             CEEE-E-ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--TEEEEEEEEESSEEEEEECTTSCEEE
T ss_pred             cEEE-E-eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--CcEEEeeCCCcccCCeEEcCCCCEEE
Confidence            6421 1 11111 11245889999999997765532      24455555 2  2222         123345567655 


Q ss_pred             EEEcCCCcEEEEECC--CC-eee--eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        369 VSTGADGLLKLWSIK--TS-TCV--STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~--~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                      ++.+.++.|.+||+.  ++ +..  ..+..         +....     +....++++++|+++++...++.|..||. +
T Consensus       195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~---------~~~~~-----~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~  259 (326)
T 2ghs_A          195 FVDTKVNRLMRVPLDARTGLPTGKAEVFID---------STGIK-----GGMDGSVCDAEGHIWNARWGEGAVDRYDT-D  259 (326)
T ss_dssp             EEETTTCEEEEEEBCTTTCCBSSCCEEEEE---------CTTSS-----SEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred             EEECCCCEEEEEEcccccCCcccCceEEEE---------CCCCC-----CCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence            445567889999986  44 211  01100         00000     14567889999998887777789999998 5


Q ss_pred             ceeeeEeecCCcceEEEEEe-cCCCEEEEEeC
Q psy10942        444 YVCLKSLEGHDASVLRCHFI-NKGTQIVSTGA  474 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~  474 (537)
                      ++.+..+..+...+++++|+ ++++.|+.++.
T Consensus       260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             CCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            77777777777779999999 88877765544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.86  E-value=1.3e-07  Score=87.36  Aligned_cols=292  Identities=12%  Similarity=0.007  Sum_probs=157.8

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL   95 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~   95 (537)
                      +..++.++.++.|..|| .+++.+...+....+... +...+        ++ .++.++.+  |..+|. +++.+.....
T Consensus        30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~-~~~~~--------~g-~l~v~t~~--l~~~d~-~g~~~~~~~~   95 (330)
T 3hxj_A           30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECR-PSIGK--------DG-TIYFGSDK--VYAINP-DGTEKWRFDT   95 (330)
T ss_dssp             TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEEC-CEETT--------TT-EECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred             CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccc-eEEec--------CC-cEEEecCc--EEEECC-CCcEEEEEEC
Confidence            44677777777799999 888887665533322211 12222        33 35555544  888886 7777776665


Q ss_pred             Ccc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942         96 SSP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN  174 (537)
Q Consensus        96 ~~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~  174 (537)
                      ... .....+.  +..|.+++.++.|..+|...            +.......+...+.++... + ++.+++++.++. 
T Consensus        96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g------------~~~~~~~~~~~~~~~~~~~-~-~g~l~vgt~~~~-  158 (330)
T 3hxj_A           96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTDG------------TEKWRFKTKKAIYATPIVS-E-DGTIYVGSNDNY-  158 (330)
T ss_dssp             -----CCEEEE--TTEEEEECTTSEEEEECTTS------------CEEEEEECSSCCCSCCEEC-T-TSCEEEECTTSE-
T ss_pred             CCCcccCceEE--CCEEEEEecCCEEEEEcCCC------------CEEEEEcCCCceeeeeEEc-C-CCEEEEEcCCCE-
Confidence            432 2223333  44577788888899999773            2233333333445555554 2 344666665444 


Q ss_pred             CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                         +                 ..+|.       . ++..  ..     ..  ...+.++   ...+++..++..   +.+
T Consensus       159 ---l-----------------~~~d~-------~-g~~~~~~~-----~~--~~~~~~~---~~d~~g~l~v~t---~~l  197 (330)
T 3hxj_A          159 ---L-----------------YAINP-------D-GTEKWRFK-----TN--DAITSAA---SIGKDGTIYFGS---DKV  197 (330)
T ss_dssp             ---E-----------------EEECT-------T-SCEEEEEE-----CS--SCCCSCC---EECTTCCEEEES---SSE
T ss_pred             ---E-----------------EEECC-------C-CCEeEEEe-----cC--CCceeee---EEcCCCEEEEEe---CEE
Confidence               6                 55555       4 3322  11     12  2233334   344444433322   333


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      .  .++                                            .+++.....     ......+.++...++|
T Consensus       198 ~--~~d--------------------------------------------~~g~~~~~~-----~~~~~~~~~~~~~~~g  226 (330)
T 3hxj_A          198 Y--AIN--------------------------------------------PDGTEKWNF-----YAGYWTVTRPAISEDG  226 (330)
T ss_dssp             E--EEC--------------------------------------------TTSCEEEEE-----CCSSCCCSCCEECTTS
T ss_pred             E--EEC--------------------------------------------CCCcEEEEE-----ccCCcceeceEECCCC
Confidence            3  344                                            222211111     1112346667777777


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      . +..++.++.+..+|..  ...+..+.....                                                
T Consensus       227 ~-l~v~t~~~gl~~~~~~--g~~~~~~~~~~~------------------------------------------------  255 (330)
T 3hxj_A          227 T-IYVTSLDGHLYAINPD--GTEKWRFKTGKR------------------------------------------------  255 (330)
T ss_dssp             C-EEEEETTTEEEEECTT--SCEEEEEECSSC------------------------------------------------
T ss_pred             e-EEEEcCCCeEEEECCC--CCEeEEeeCCCC------------------------------------------------
Confidence            5 4556667777777643  222222211100                                                


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                       .+..+.+.+++ .|..++.+|.|..+|. +++.+..+......+.++...++++ |..++.+|.+++...+.
T Consensus       256 -~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          256 -IESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE  324 (330)
T ss_dssp             -CCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred             -ccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence             11122334444 4566777888999995 6777777765556677788777776 56688999999887643

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.85  E-value=7.4e-07  Score=88.35  Aligned_cols=81  Identities=9%  Similarity=0.074  Sum_probs=57.9

Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG  512 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  512 (537)
                      +|.|.-||+.+++.+.+..... ++..-.....+.+++.++.|+.++.||.++|+.+..++......          ...
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~----------a~P  533 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV----------SPP  533 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCC
T ss_pred             cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcc----------cCc
Confidence            6889999999999888876432 22222223346688889999999999999999999887654332          023


Q ss_pred             ccceeeecCCCEEEE
Q psy10942        513 LPRQLCSRNSDCEYR  527 (537)
Q Consensus       513 ~~~~~~s~~~~~l~s  527 (537)
                      +   .+..+|++.++
T Consensus       534 ~---~y~~~G~qYv~  545 (582)
T 1flg_A          534 I---TWEQDGEQYLG  545 (582)
T ss_dssp             E---EEEETTEEEEE
T ss_pred             e---EEEECCEEEEE
Confidence            4   77788875443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.85  E-value=5.8e-07  Score=77.17  Aligned_cols=183  Identities=13%  Similarity=0.076  Sum_probs=124.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      .....+.|+ ++.++.+.+.+|.|+.+|+. +++.+..+ ..+.          +...+....++.+.+||..+.+.+.+
T Consensus        55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t  131 (268)
T 3nok_A           55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLE-SAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT  131 (268)
T ss_dssp             CCEEEEEEE-TTEEEEEETTTTEEEECCSS-CSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred             cccceEEEE-CCEEEEEcCCCCEEEEEECC-CCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence            345788887 46677777888899999999 56666555 3322          34555566789999999999999888


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--Cc---ceEEEEEecC
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DA---SVLRCHFINK  465 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~v~~~~~s~~  465 (537)
                      +.....                  -..+  ++|++.|+.+..++.|.++|..+.+.+.++.-.  ..   .++.+.|. +
T Consensus       132 i~~~~e------------------GwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d  190 (268)
T 3nok_A          132 TRYSGE------------------GWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N  190 (268)
T ss_dssp             EECSSC------------------CCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred             EeCCCc------------------eeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence            865321                  1222  356777888777899999999999888877642  22   35677887 7


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeEEEecCCccc--eeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        466 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK--IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       466 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      |+..+..-.++.|.+.|.++|+.+..+....-.  ............+.+   |++|+++.|++.+.
T Consensus       191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGI---A~dp~~~rlfVTGK  254 (268)
T 3nok_A          191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGI---AVEPGSGRIFMTGK  254 (268)
T ss_dssp             TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEE---EECTTTCCEEEEET
T ss_pred             CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEE---EEcCCCCEEEEeCC
Confidence            765555556889999999999999888643110  000000011122556   99998887776653

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.81  E-value=2.3e-07  Score=86.04  Aligned_cols=190  Identities=12%  Similarity=0.039  Sum_probs=115.2

Q ss_pred             CCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCcee----------------eEEEEecCCCCEEEEEcC-----CCcE
Q psy10942        321 KDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKL----------------LNVLRGHKKGTQIVSTGA-----DGLL  377 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~----------------~~~~~~~~~~~~l~~~~~-----d~~i  377 (537)
                      .....++++|+|+.+++..  .++.++||.+. ..+.                ...+...+++.++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            5688999999999888863  23435555554 2222                222333444555554433     5789


Q ss_pred             EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE-EEEe---CCCcEEEEECCCceeeeEeecC
Q psy10942        378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL-ISSS---GDATIKLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~  453 (537)
                      .+||+.+++.+..+.......     .+.      ..+..++++|++..+ ++..   .++.|.+||+.+++....+.+|
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~~-----~~~------~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~  164 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPIT-----LSN------SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY  164 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTTS-----CTT------CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred             EEEECCCCeEEEEEECChhhc-----ccc------cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence            999998888766654321100     000      145778888765444 4444   5789999999887766555332


Q ss_pred             C-----------------------------cceEEEEEecCCCEEEEEeCCCcEEEEECCC-----Cee-----EE--Ee
Q psy10942        454 D-----------------------------ASVLRCHFINKGTQIVSTGADGLLKLWSIKT-----STC-----VS--TF  492 (537)
Q Consensus       454 ~-----------------------------~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~-----~~~-----~~--~~  492 (537)
                      .                             ..+..++|+|+++.|+.+..++. ++|.+..     +..     ..  ..
T Consensus       165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (343)
T 2qe8_A          165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIER  243 (343)
T ss_dssp             TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEE
T ss_pred             CcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEe
Confidence            1                             23588999999999988877663 4444321     100     00  00


Q ss_pred             cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      .++....           ..+   +++++|+++++...++.|.+|
T Consensus       244 ~g~~g~p-----------dgi---a~d~~G~l~va~~~~~~V~~~  274 (343)
T 2qe8_A          244 YSEKPIC-----------DGI---SIDKDHNIYVGDLAHSAIGVI  274 (343)
T ss_dssp             EEECCSC-----------SCE---EECTTCCEEEEEGGGTEEEEE
T ss_pred             cccCCCC-----------ceE---EECCCCCEEEEccCCCeEEEE
Confidence            1111222           567   999999988888888888776

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.78  E-value=9.5e-07  Score=87.51  Aligned_cols=157  Identities=11%  Similarity=0.037  Sum_probs=91.8

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeeccc-cc-------ccCCCe--------------------------EEEEEcCCC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGH-KK-------GHEKDI--------------------------NCVTVSPND  332 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~-------~~~~~v--------------------------~~~~~s~~~  332 (537)
                      .++.++.+|.+.++|..+++.+....... ..       ....++                          ..++++|+.
T Consensus       318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~  397 (571)
T 2ad6_A          318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES  397 (571)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred             EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence            46667778888888888877654331110 00       000011                          346788988


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE-------EEE------cCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI-------VST------GADGLLKLWSIKTSTCVSTFDKHALKIW  399 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l-------~~~------~~d~~i~i~d~~~~~~~~~~~~~~~~i~  399 (537)
                      .++++...+....++.....         ...+...       ...      ..+|.+..||..+++.+.++....    
T Consensus       398 g~~yv~~~~~~~~~~~~~~~---------~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~----  464 (571)
T 2ad6_A          398 RTLYAGLNHICMDWEPFMLP---------YRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF----  464 (571)
T ss_dssp             TEEEEEEECEEEEEEECCCC---------CCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----
T ss_pred             CEEEEEchhccccccccccc---------cccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC----
Confidence            88888877655555443311         0111100       000      246889999999998877664332    


Q ss_pred             EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCCEEE
Q psy10942        400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGTQIV  470 (537)
Q Consensus       400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~  470 (537)
                                    .+....+...+..++.++.|+.|+.+|.++++.+.+++..... -.-+.+..+|+.++
T Consensus       465 --------------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          465 --------------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             --------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             --------------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence                          1111112223556777899999999999999999988754321 12234556776444

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.74  E-value=0.00028  Score=70.45  Aligned_cols=143  Identities=6%  Similarity=-0.121  Sum_probs=78.4

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceee-eec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ...++|.+ .++.++++-..++.|..++++...... .+. .......+  .+.+.       +++++++-...+.|.+.
T Consensus        42 ~~~ld~~~-~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl--AvD~~-------~~~ly~~d~~~~~I~v~  111 (619)
T 3s94_A           42 AAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL--ACDWL-------GEKLYWTDSETNRIEVS  111 (619)
T ss_dssp             EEEEEEET-TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE--EEETT-------TTEEEEEETTTTEEEEE
T ss_pred             eEEEEEEe-CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE--EEEec-------CCEEEEEeCCCCEEEEE
Confidence            45788883 244444454556778888876553212 222 11333445  33443       55677777778899999


Q ss_pred             eccceehhhhc-CCCcceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc
Q psy10942         83 ETSAVKELYQH-GLSSPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG  159 (537)
Q Consensus        83 d~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  159 (537)
                      ++......... ..-.....+++.|.+.+|.....  .+.|...+++.           ..........-.....+++. 
T Consensus       112 ~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-----------~~~~~l~~~~~~~P~Glald-  179 (619)
T 3s94_A          112 NLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-----------SSRFIIINSEIYWPNGLTLD-  179 (619)
T ss_dssp             ETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-----------CSCEEEECSSCSSEEEEEEE-
T ss_pred             ECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-----------CceEEEEeCCCCCCcEEEEE-
Confidence            98754322222 22256789999997666665553  35566666665           22222222222345778888 


Q ss_pred             CCCccEEEee
Q psy10942        160 EEDSHIVVAS  169 (537)
Q Consensus       160 ~~~~~l~~~~  169 (537)
                      ++++.|..+.
T Consensus       180 ~~~~~LY~aD  189 (619)
T 3s94_A          180 YEEQKLYWAD  189 (619)
T ss_dssp             TTTTEEEEEE
T ss_pred             ccCCEEEEEe
Confidence            5555665553

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.74  E-value=3.7e-06  Score=85.16  Aligned_cols=200  Identities=11%  Similarity=0.133  Sum_probs=127.0

Q ss_pred             CCeEEEEECCCCceeeeeeccccc--------------------------ccCCCeEEEEEcCCCCEEEEEeCCCc----
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKK--------------------------GHEKDINCVTVSPNDKLLASGSLDKT----  343 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~----  343 (537)
                      ++.|..+|..+++...+.......                          .+......++++|+..+++.+..++.    
T Consensus       177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~  256 (668)
T 1kv9_A          177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR  256 (668)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred             CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence            589999999999876654211000                          01111235788898889988887663    


Q ss_pred             ---------------EEEEEccCCceeeEEEEecC-------------------CCC---EEEEEcCCCcEEEEECCCCe
Q psy10942        344 ---------------VKVWSTTGGLKLLNVLRGHK-------------------KGT---QIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       344 ---------------i~i~d~~~~~~~~~~~~~~~-------------------~~~---~l~~~~~d~~i~i~d~~~~~  386 (537)
                                     |..+|.. +++.+-.+...+                   ++.   .++.++.+|.++++|..+++
T Consensus       257 ~~~~~~~gd~l~~~~v~AlD~~-tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  335 (668)
T 1kv9_A          257 EVRSPGGGDNLYLSSILAIRPD-TGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK  335 (668)
T ss_dssp             HHHSTTCCCCTTTTEEEEECTT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             CCCCCCCCCceeeeeEEEEcCC-CCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence                           8888888 444444443211                   222   57888899999999999999


Q ss_pred             eeeeeccCCcceEEEEEe---------c----CCCceEEe-------eeeEEEEcCCCCEEEEE----------------
Q psy10942        387 CVSTFDKHALKIWTLAIT---------K----DENQIITG-------GVWFVNFSPLDRILISS----------------  430 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~---------~----~~~~~~~~-------~i~~~~~s~~~~~l~~~----------------  430 (537)
                      .+......... +...+.         +    +++.....       .-..++++|+..++...                
T Consensus       336 ~l~~~~~~~~~-w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~  414 (668)
T 1kv9_A          336 LISAEKFGKVT-WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV  414 (668)
T ss_dssp             EEEEEESSCCC-SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred             Eeccccccccc-cccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence            88554332210 000110         0    00000000       01225666665554432                


Q ss_pred             --------------------eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        431 --------------------SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       431 --------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                                          ..+|.|..||+.+++.+.+.+.+ .+.....+...+.++++++.|+.++.||.++|+.+.
T Consensus       415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~  493 (668)
T 1kv9_A          415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW  493 (668)
T ss_dssp             CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence                                12478999999999998887744 334444555677899999999999999999999998


Q ss_pred             EecCCc
Q psy10942        491 TFDKHA  496 (537)
Q Consensus       491 ~~~~~~  496 (537)
                      .++...
T Consensus       494 ~~~~~~  499 (668)
T 1kv9_A          494 QFEAQS  499 (668)
T ss_dssp             EEECSS
T ss_pred             EecCCC
Confidence            887653

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.72  E-value=1e-06  Score=87.19  Aligned_cols=108  Identities=7%  Similarity=0.035  Sum_probs=65.2

Q ss_pred             CcceEEEecC-cceEEEEEc-Cccceeeeeccccccc-----ee-----eeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942         15 TSEFSVHCGR-DKVLFTWDL-SSRKQLRSYPAYESLE-----TC-----AVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus        15 ~~~~l~s~~~-~g~v~iwd~-~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      .+..++.++. ++.|.-.|. ++|+++=++.......     ++     +..+.|..    ......+++++.++.|..+
T Consensus        61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~----g~~~~rV~v~t~dg~l~Al  136 (599)
T 1w6s_A           61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD----GKTPALILKTQLDGNVAAL  136 (599)
T ss_dssp             ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC----SSSCCEEEEECTTSEEEEE
T ss_pred             ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC----CcceeEEEEEcCCCEEEEE
Confidence            4556777777 788999999 9999887766433211     01     11222210    0011236777779999999


Q ss_pred             eccceehhhhcCCCc-----ceEEEEEeccccEEEEEe------CCceEEEEeccc
Q psy10942         83 ETSAVKELYQHGLSS-----PLVRIVRSSVKRMYAVVT------ADHNISLYRLNS  127 (537)
Q Consensus        83 d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~la~~~------~d~~i~iwd~~~  127 (537)
                      |..+|+.+.+....+     .+.+--.-.++ .+++++      .++.|+-+|..+
T Consensus       137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~T  191 (599)
T 1w6s_A          137 NAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKT  191 (599)
T ss_dssp             ETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred             ECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCC
Confidence            999999887654332     22211111244 444444      378999999998

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.71  E-value=9.5e-06  Score=80.35  Aligned_cols=226  Identities=13%  Similarity=0.028  Sum_probs=133.5

Q ss_pred             EEEEEeC------CCeEEEEECCCCceeeeeeccccc--c-----------------------------c-CC-CeEEEE
Q psy10942        287 LLASGSL------DKTVKVWSTTGGLKLLNVLRGHKK--G-----------------------------H-EK-DINCVT  327 (537)
Q Consensus       287 ~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~--~-----------------------------~-~~-~v~~~~  327 (537)
                      .++.++.      ++.|..+|..+++...+.......  .                             + .. ....++
T Consensus       162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a  241 (571)
T 2ad6_A          162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA  241 (571)
T ss_dssp             EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred             EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence            4555554      799999999999876554211100  0                             0 00 012356


Q ss_pred             EcCCCCEEEEEeCC----------------CcEEEEEccCCceeeEEEEec-------------------CCC---CEEE
Q psy10942        328 VSPNDKLLASGSLD----------------KTVKVWSTTGGLKLLNVLRGH-------------------KKG---TQIV  369 (537)
Q Consensus       328 ~s~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~-------------------~~~---~~l~  369 (537)
                      +.++...++.+..+                +.|..+|.. +++.+-.++..                   .++   ..++
T Consensus       242 ~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~-tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~  320 (571)
T 2ad6_A          242 YDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLD-TGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS  320 (571)
T ss_dssp             EETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETT-TCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE
T ss_pred             EcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecC-CCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE
Confidence            77776777776542                258888887 44444333321                   123   2466


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCc--ceEEEE-------E----ec--CCCceEEe-------eeeEEEEcCCCCEE
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHAL--KIWTLA-------I----TK--DENQIITG-------GVWFVNFSPLDRIL  427 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~-------~----~~--~~~~~~~~-------~i~~~~~s~~~~~l  427 (537)
                      .++.+|.+.++|..+++.+..+.....  ....+.       .    .|  ........       .-..++++|+..++
T Consensus       321 ~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~  400 (571)
T 2ad6_A          321 HIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTL  400 (571)
T ss_dssp             EECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEE
T ss_pred             EeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEE
Confidence            788899999999999998876643321  011100       0    00  00000000       01245666666655


Q ss_pred             EEEe-------------------------------------CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE
Q psy10942        428 ISSS-------------------------------------GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV  470 (537)
Q Consensus       428 ~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  470 (537)
                      ++..                                     .+|.|..||+.+++.+.++... ..+....+...+..++
T Consensus       401 yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~  479 (571)
T 2ad6_A          401 YAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVW  479 (571)
T ss_dssp             EEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEE
T ss_pred             EEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEE
Confidence            5543                                     3578999999999988887643 3333333344566788


Q ss_pred             EEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        471 STGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       471 s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      .++.|+.|+.+|.++|+.+..++......          ...+   .+..+|++++.
T Consensus       480 ~g~~dg~l~a~D~~tG~~lw~~~~~~~~~----------~~p~---~~~~~G~~yv~  523 (571)
T 2ad6_A          480 YATLDGYLKALDNKDGKELWNFKMPSGGI----------GSPM---TYSFKGKQYIG  523 (571)
T ss_dssp             EECTTSEEEEEETTTCCEEEEEECSSCCC----------SCCE---EEEETTEEEEE
T ss_pred             EEcCCCeEEEEECCCCCEEEEEeCCCCcE----------eeeE---EEEECCEEEEE
Confidence            89999999999999999998887544322          0233   56678875554

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.70  E-value=1.2e-05  Score=74.81  Aligned_cols=189  Identities=12%  Similarity=0.057  Sum_probs=120.1

Q ss_pred             CCCCEEEEEe-CCCcEEEEEccCC---ceeeEEE-----------------EecCCCCEEEEEcCC------CcEEEEEC
Q psy10942        330 PNDKLLASGS-LDKTVKVWSTTGG---LKLLNVL-----------------RGHKKGTQIVSTGAD------GLLKLWSI  382 (537)
Q Consensus       330 ~~~~~l~~~~-~d~~i~i~d~~~~---~~~~~~~-----------------~~~~~~~~l~~~~~d------~~i~i~d~  382 (537)
                      +++++|++.+ .++.|+++|+...   .+....+                 ...+++ .++++..+      +.+.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            7788777654 6788999998622   2444444                 233567 66665554      78999999


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-------------------CCCcEEEEECCC
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-------------------GDATIKLWCLTD  443 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------------------~dg~i~i~d~~~  443 (537)
                      .+++.+.++.....+        ++      --..+.|+|+++.+++..                   .+.+|.+||+.+
T Consensus       172 ~T~~v~~~~~~~~~~--------~~------~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~  237 (462)
T 2ece_A          172 YSFEPLGKWEIDRGD--------QY------LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK  237 (462)
T ss_dssp             TTCCEEEECCSBCTT--------CC------CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred             CCCeEEEEEccCCCC--------cc------ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence            999998888643221        00      233567788888888774                   368999999999


Q ss_pred             ceeeeEeecC-C-cceEEEEE--ecCCCEEEEEe------CCCcEEEEECCCCeeE--EEecCCccceec-cCCCC----
Q psy10942        444 YVCLKSLEGH-D-ASVLRCHF--INKGTQIVSTG------ADGLLKLWSIKTSTCV--STFDKHALKIRN-SDSEN----  506 (537)
Q Consensus       444 ~~~~~~~~~~-~-~~v~~~~~--s~~~~~l~s~~------~dg~v~vwd~~~~~~~--~~~~~~~~~i~~-~~~~~----  506 (537)
                      ++.+.++... . .....+.|  +|+++++++++      .+++|.+|..+.++..  +.+......+.. .....    
T Consensus       238 ~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~  317 (462)
T 2ece_A          238 RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK  317 (462)
T ss_dssp             TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred             CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence            9888888753 1 23456666  99999988777      4568888776655321  111111111100 00000    


Q ss_pred             --CCccccccceeeecCCCEEEEEeC-CCCEEe
Q psy10942        507 --DHKGFGLPRQLCSRNSDCEYRGGW-SPQVVV  536 (537)
Q Consensus       507 --~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~v  536 (537)
                        ...+..+   .+|+||++|+++.. .+.|.+
T Consensus       318 ~~~~~pa~I---~lS~DGrfLYVSnrg~d~Vav  347 (462)
T 2ece_A          318 AVPPLVTDI---DISLDDKFLYLSLWGIGEVRQ  347 (462)
T ss_dssp             EECCCCCCE---EECTTSCEEEEEETTTTEEEE
T ss_pred             cCCCceeEE---EECCCCCEEEEEeCCCCEEEE
Confidence              1223667   99999999998765 455654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.67  E-value=2.1e-06  Score=86.97  Aligned_cols=225  Identities=12%  Similarity=0.076  Sum_probs=137.0

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE-EEEcCCCCEEEEEeC------CCcEEEEEccCCceeeEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC-VTVSPNDKLLASGSL------DKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~  358 (537)
                      ..++.++.|+.|..+|..+++...+...... .....+.+ ..+. ++ .++++..      ++.|+.+|.. +++.+-.
T Consensus       118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~  193 (668)
T 1kv9_A          118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDP-AKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDAD-TGKLAWR  193 (668)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECSCT-TSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETT-TCCEEEE
T ss_pred             CEEEEEcCCCEEEEEECCCCCEeeeeccCCC-CCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECC-CCcEEEE
Confidence            4678888999999999999987665422100 00011110 1111 34 4555543      5889999998 4444443


Q ss_pred             EEe-----------------------------------------cCCCCEEEEEcCCC-------------------cEE
Q psy10942        359 LRG-----------------------------------------HKKGTQIVSTGADG-------------------LLK  378 (537)
Q Consensus       359 ~~~-----------------------------------------~~~~~~l~~~~~d~-------------------~i~  378 (537)
                      +..                                         .+....++.++.++                   .|.
T Consensus       194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~  273 (668)
T 1kv9_A          194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL  273 (668)
T ss_dssp             EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence            331                                         11245666776655                   388


Q ss_pred             EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC---EEEEEeCCCcEEEEECCCceeeeEeecCCc
Q psy10942        379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR---ILISSSGDATIKLWCLTDYVCLKSLEGHDA  455 (537)
Q Consensus       379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  455 (537)
                      .+|..+++.+..++......+.....        .+.....+..+|+   .++.++.+|.++++|..+|+.+...+....
T Consensus       274 AlD~~tG~~~W~~~~~~~~~wd~~~~--------~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~  345 (668)
T 1kv9_A          274 AIRPDTGKLAWHYQVTPGDSWDFTAT--------QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKV  345 (668)
T ss_dssp             EECTTTCCEEEEEESSTTCCSCCCCC--------SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred             EEcCCCCceeeEeecCCCccccccCC--------CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccc
Confidence            99999999887776432111110000        0111112223554   688889999999999999998854432110


Q ss_pred             ------------ce------------------------EEEEEecCCCEEEEEe--------------------------
Q psy10942        456 ------------SV------------------------LRCHFINKGTQIVSTG--------------------------  473 (537)
Q Consensus       456 ------------~v------------------------~~~~~s~~~~~l~s~~--------------------------  473 (537)
                                  ++                        ..++++|+..+++...                          
T Consensus       346 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~  425 (668)
T 1kv9_A          346 TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF  425 (668)
T ss_dssp             CSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred             ccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccc
Confidence                        00                        1267888777665421                          


Q ss_pred             ----------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        474 ----------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       474 ----------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                                .+|.|..||+.+|+.+.....+. ..           ...   .+...+.+++.++.||.++.|
T Consensus       426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~-----------~~~---~~~t~gg~vf~g~~dg~l~a~  484 (668)
T 1kv9_A          426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HW-----------NGG---TLSTAGNLVFQGTAAGQMHAY  484 (668)
T ss_dssp             GGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SC-----------CCC---EEEETTTEEEEECTTSEEEEE
T ss_pred             cccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CC-----------cCc---eeEeCCCEEEEECCcccchhh
Confidence                      23789999999999988776443 22           334   567788899999999998764

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.64  E-value=2.3e-05  Score=77.56  Aligned_cols=81  Identities=16%  Similarity=0.094  Sum_probs=56.5

Q ss_pred             CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccc
Q psy10942        432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF  511 (537)
Q Consensus       432 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  511 (537)
                      .+|.|.-||+.+++.+.+.+.. .+...-.....+.+++.++.|+.++.||.++|+.+..++.....+          ..
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~----------~~  519 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI----------GY  519 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SC
T ss_pred             CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE----------ec
Confidence            3478999999999988877532 222221233356788889999999999999999999887554333          03


Q ss_pred             cccceeeecCCCEEE
Q psy10942        512 GLPRQLCSRNSDCEY  526 (537)
Q Consensus       512 ~~~~~~~s~~~~~l~  526 (537)
                      .+   .+..+|++.+
T Consensus       520 P~---~y~~~G~qyv  531 (599)
T 1w6s_A          520 PM---TYTHKGTQYV  531 (599)
T ss_dssp             CE---EEEETTEEEE
T ss_pred             cE---EEEeCCEEEE
Confidence            34   6777887543

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.61  E-value=0.00066  Score=67.78  Aligned_cols=143  Identities=6%  Similarity=-0.100  Sum_probs=83.8

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc-ccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      +..|+|.+ .++..+++-..++.|..++++.......+.. ......+  ++-+.       +++++++-...+.|.+.+
T Consensus        39 ~~~l~~d~-~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl--AvD~~-------~~~LY~tD~~~~~I~v~~  108 (628)
T 4a0p_A           39 ASALDFDV-TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM--AVDWL-------GKNLYWADTGTNRIEVSK  108 (628)
T ss_dssp             EEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE--EEETT-------TTEEEEEETTTTEEEEEE
T ss_pred             eEEEEEEC-CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE--EEEeC-------CCEEEEEECCCCEEEEEe
Confidence            45788883 2445555656678888888875443333331 1234445  33443       556777777788899999


Q ss_pred             ccceehhhhc-CCCcceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         84 TSAVKELYQH-GLSSPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        84 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      +......... ..-.....+++.|...+|.....  .+.|...+++..           . ...+...-.....+++. +
T Consensus       109 ~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-----------~-~~~l~~~~~~P~GlalD-~  175 (628)
T 4a0p_A          109 LDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-----------E-RTTLVPNVGRANGLTID-Y  175 (628)
T ss_dssp             TTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----------S-CEEEECSCSSEEEEEEE-T
T ss_pred             cCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-----------c-eEEEECCCCCcceEEEc-c
Confidence            8654321111 22356899999996666665542  456777777762           2 22222233346778888 5


Q ss_pred             CCccEEEeee
Q psy10942        161 EDSHIVVASN  170 (537)
Q Consensus       161 ~~~~l~~~~~  170 (537)
                      +++.|..+..
T Consensus       176 ~~~~LY~aD~  185 (628)
T 4a0p_A          176 AKRRLYWTDL  185 (628)
T ss_dssp             TTTEEEEEET
T ss_pred             ccCEEEEEEC
Confidence            5566655543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.55  E-value=4e-07  Score=79.33  Aligned_cols=199  Identities=7%  Similarity=-0.054  Sum_probs=125.2

Q ss_pred             eeeeeeeccCCcceEEEecC--cceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQITSEFSVHCGR--DKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~--~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ...|.|+  +|+.++++.+.  ++.|++.|+++++.+..++........++...         ++.+.++.-.++.+.++
T Consensus        23 ~~Gl~~~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~---------g~~lyv~t~~~~~v~vi   91 (266)
T 2iwa_A           23 TQGLVYA--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL---------NEKLYQVVWLKNIGFIY   91 (266)
T ss_dssp             EEEEEEC--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---------TTEEEEEETTCSEEEEE
T ss_pred             cccEEEe--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe---------CCEEEEEEecCCEEEEE
Confidence            3578898  66665555553  57899999999999998875444333333333         33556666678999999


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhhc
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIAL  157 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~  157 (537)
                      |..+++.+.++... .-....+++||+.|+++..++.|.++|..+           .+....+.-...     .++.+.|
T Consensus        92 D~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t-----------~~v~~~I~Vg~~~~p~~~~nele~  159 (266)
T 2iwa_A           92 DRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHT-----------FKLIKKHNVKYNGHRVIRLNELEY  159 (266)
T ss_dssp             ETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTT-----------CCEEEEEECEETTEECCCEEEEEE
T ss_pred             ECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCC-----------CcEEEEEEECCCCcccccceeEEE
Confidence            99999988887643 112345778999888887788999999998           666666653221     2456666


Q ss_pred             ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccc------ccCCCcCeEE
Q psy10942        158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTER------LGRDELKTVT  229 (537)
Q Consensus       158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~------~~h~~~~~v~  229 (537)
                      .  + ..+++.... .  ..|                 .+.|.       .+++..  +....+      ..+.......
T Consensus       160 ~--d-g~lyvn~~~-~--~~V-----------------~vID~-------~tg~V~~~I~~~g~~~~~~~~~~~~~~v~n  209 (266)
T 2iwa_A          160 I--N-GEVWANIWQ-T--DCI-----------------ARISA-------KDGTLLGWILLPNLRKKLIDEGFRDIDVLN  209 (266)
T ss_dssp             E--T-TEEEEEETT-S--SEE-----------------EEEET-------TTCCEEEEEECHHHHHHHHHTTCTTCCCEE
T ss_pred             E--C-CEEEEecCC-C--CeE-----------------EEEEC-------CCCcEEEEEECCCcccccccccccccCceE
Confidence            5  2 345443322 1  225                 55566       555544  221100      0110024568


Q ss_pred             EEeccCcccCCCeee-eccCCCcceeccccccC
Q psy10942        230 LLERGKTVKEEDLFP-RQSMEPSTLEELEKRKT  261 (537)
Q Consensus       230 ~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~  261 (537)
                      .+   +|+|+++.++ ++...+.+.  .-++..
T Consensus       210 GI---a~~~~~~~lfVTgk~~~~v~--~i~l~~  237 (266)
T 2iwa_A          210 GI---AWDQENKRIFVTGKLWPKLF--EIKLHL  237 (266)
T ss_dssp             EE---EEETTTTEEEEEETTCSEEE--EEEEEE
T ss_pred             EE---EEcCCCCEEEEECCCCCeEE--EEEEec
Confidence            89   9999986554 555566666  555544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.54  E-value=0.00034  Score=74.72  Aligned_cols=87  Identities=8%  Similarity=0.126  Sum_probs=54.8

Q ss_pred             EEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCCcceEEEE
Q psy10942         28 LFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLSSPLVRIV  103 (537)
Q Consensus        28 v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~~~v~~~~  103 (537)
                      |++.+.+.++.+...+  ....|..+++            +...++.+. .+.+.++.+..++  .+......+.|.|++
T Consensus       494 Irli~~~~~~~~~~w~~p~~~~I~~As~------------n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~  560 (1158)
T 3ei3_A          494 VRLVSQEPKALVSEWKEPQAKNISVASC------------NSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLD  560 (1158)
T ss_dssp             EEEEESSSCCEEEEECCTTCCCCCEEEE------------CSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred             EEEEECCCCeEEEEEECCCCCEEEEEEe------------CCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEE
Confidence            5566655554554443  2334554422            223455553 5678788776543  233344457899999


Q ss_pred             Eecc------ccEEEEEeC-CceEEEEeccc
Q psy10942        104 RSSV------KRMYAVVTA-DHNISLYRLNS  127 (537)
Q Consensus       104 ~s~~------~~~la~~~~-d~~i~iwd~~~  127 (537)
                      +.|.      ++++|+|.. |++++|+++.+
T Consensus       561 i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~  591 (1158)
T 3ei3_A          561 ITPLGDSNGLSPLCAIGLWTDISARILKLPS  591 (1158)
T ss_dssp             CCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred             eecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence            9763      368999996 99999999987

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.53  E-value=5.5e-07  Score=77.37  Aligned_cols=186  Identities=9%  Similarity=0.028  Sum_probs=120.1

Q ss_pred             eeeeeeeccCCcceEEEecCcc--eEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDK--VLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ...|.|+   ++.++.+.+.+|  .|++.|+++++.+++++........++....        + ++.+....++.+.+|
T Consensus        45 tqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g--------~-~ly~ltw~~~~v~v~  112 (262)
T 3nol_A           45 TEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK--------D-KIVGLTWKNGLGFVW  112 (262)
T ss_dssp             EEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET--------T-EEEEEESSSSEEEEE
T ss_pred             cceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC--------C-EEEEEEeeCCEEEEE
Confidence            4567777   456677777665  8999999999999988865555443333333        3 455555668899999


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch--hh---hhhhhc
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS--DE---ILDIAL  157 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~---v~~~~~  157 (537)
                      |..+++.+.++....  ....+++|++.|+.+..++.|.++|..+           .+...++.-..  ..   ++.+.|
T Consensus       113 D~~t~~~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T-----------~~v~~~I~V~~~g~~~~~lNELe~  179 (262)
T 3nol_A          113 NIRNLRQVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPES-----------LTPVRTITVTAHGEELPELNELEW  179 (262)
T ss_dssp             ETTTCCEEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTT-----------CSEEEEEECEETTEECCCEEEEEE
T ss_pred             ECccCcEEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCC-----------CeEEEEEEeccCCccccccceeEE
Confidence            999999998888654  3345557888888877678899999998           67676665422  22   234666


Q ss_pred             ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc-----cCCCcCeEEE
Q psy10942        158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL-----GRDELKTVTL  230 (537)
Q Consensus       158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~-----~h~~~~~v~~  230 (537)
                      .   +..|.+.....   ..|                 .+.|.       ++++..  +....+.     .++.......
T Consensus       180 ~---~G~lyan~w~~---~~I-----------------~vIDp-------~tG~V~~~Id~~~L~~~~~~~~~~~~vlNG  229 (262)
T 3nol_A          180 V---DGEIFANVWQT---NKI-----------------VRIDP-------ETGKVTGIIDLNGILAEAGPLPSPIDVLNG  229 (262)
T ss_dssp             E---TTEEEEEETTS---SEE-----------------EEECT-------TTCBEEEEEECTTGGGGSCSCCSSCCCEEE
T ss_pred             E---CCEEEEEEccC---CeE-----------------EEEEC-------CCCcEEEEEECCcCccccccccCcCCceEE
Confidence            5   33455444222   225                 55566       666655  2211111     1111345688


Q ss_pred             EeccCcccCCCeeeeccC
Q psy10942        231 LERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~  248 (537)
                      +   +|+|+++.|+..+.
T Consensus       230 I---A~dp~~~~lfVTGK  244 (262)
T 3nol_A          230 I---AWDKEHHRLFVTGK  244 (262)
T ss_dssp             E---EEETTTTEEEEEET
T ss_pred             E---EEcCCCCEEEEECC
Confidence            9   99999887776665

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.52  E-value=1.5e-06  Score=74.01  Aligned_cols=185  Identities=6%  Similarity=-0.021  Sum_probs=119.8

Q ss_pred             eeeeeeeccCCcceEEEecCc--ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRD--KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      ...|.|+  + +.++.+.+.+  ..|+..|+++++.++.++........++....        + ++......++.+.+|
T Consensus        23 tqGL~~~--~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--------~-~ly~ltw~~~~v~v~   90 (243)
T 3mbr_X           23 TEGLFYL--R-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--------D-RLIQLTWRNHEGFVY   90 (243)
T ss_dssp             EEEEEEE--T-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--------T-EEEEEESSSSEEEEE
T ss_pred             cccEEEE--C-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--------C-EEEEEEeeCCEEEEE
Confidence            4567888  4 5666776765  48999999999999988866655444333333        3 555556678999999


Q ss_pred             eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhhc
Q psy10942         83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIAL  157 (537)
Q Consensus        83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~  157 (537)
                      |..+.+.+.++.....  ...+.+|++.|+++..++.|.++|..+           .+.++++.-...     .++.+.|
T Consensus        91 D~~tl~~~~ti~~~~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t-----------~~~~~~I~V~~~g~~~~~lNeLe~  157 (243)
T 3mbr_X           91 DLATLTPRARFRYPGE--GWALTSDDSHLYMSDGTAVIRKLDPDT-----------LQQVGSIKVTAGGRPLDNLNELEW  157 (243)
T ss_dssp             ETTTTEEEEEEECSSC--CCEEEECSSCEEEECSSSEEEEECTTT-----------CCEEEEEECEETTEECCCEEEEEE
T ss_pred             ECCcCcEEEEEeCCCC--ceEEeeCCCEEEEECCCCeEEEEeCCC-----------CeEEEEEEEccCCcccccceeeEE
Confidence            9999999988886543  244457888888877788999999998           677766654321     2334455


Q ss_pred             ccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc------CCCcCeE
Q psy10942        158 LGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG------RDELKTV  228 (537)
Q Consensus       158 ~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~------h~~~~~v  228 (537)
                      .   +..+.+... +..    |                 .+.|.       .+++..  +....+..      ++...-.
T Consensus       158 ~---~G~lyanvw~s~~----I-----------------~vIDp-------~tG~V~~~idl~~l~~~~~~~~~~~~~vl  206 (243)
T 3mbr_X          158 V---NGELLANVWLTSR----I-----------------ARIDP-------ASGKVVAWIDLQALVPDADALTDSTNDVL  206 (243)
T ss_dssp             E---TTEEEEEETTTTE----E-----------------EEECT-------TTCBEEEEEECGGGSTTTTSCCCTTSSCE
T ss_pred             e---CCEEEEEECCCCe----E-----------------EEEEC-------CCCCEEEEEECCcCccccccccCCcCCce
Confidence            4   334544432 222    5                 55566       555554  22111111      1113467


Q ss_pred             EEEeccCcccCCCeeeeccC
Q psy10942        229 TLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~~~~  248 (537)
                      ..+   +++|+++.|+..+.
T Consensus       207 NGI---A~d~~~~~lfVTGK  223 (243)
T 3mbr_X          207 NGI---AFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEE---EEETTTTEEEEEET
T ss_pred             EEE---EEcCCCCEEEEECC
Confidence            889   99998877776654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.48  E-value=5.8e-07  Score=77.18  Aligned_cols=117  Identities=7%  Similarity=-0.055  Sum_probs=86.1

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET   84 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~   84 (537)
                      ...|.|+   ++.++++.+.+|.|++.|+++++.++.+ ........++....        + ++.+....++.+.+||.
T Consensus        57 tqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--------~-~Ly~ltw~~~~v~V~D~  123 (268)
T 3nok_A           57 TQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG--------E-RLYQLTWTEGLLFTWSG  123 (268)
T ss_dssp             EEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--------S-CEEEEESSSCEEEEEET
T ss_pred             cceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--------C-EEEEEEccCCEEEEEEC
Confidence            4567777   4677788888899999999999999987 44444333233333        3 44445566889999999


Q ss_pred             cceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec
Q psy10942         85 SAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG  147 (537)
Q Consensus        85 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  147 (537)
                      .+++.+.++.....  ...+++|++.|+.+..++.|.++|..+           .+.+.++.-
T Consensus       124 ~Tl~~~~ti~~~~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T-----------~~v~~~I~V  173 (268)
T 3nok_A          124 MPPQRERTTRYSGE--GWGLCYWNGKLVRSDGGTMLTFHEPDG-----------FALVGAVQV  173 (268)
T ss_dssp             TTTEEEEEEECSSC--CCCEEEETTEEEEECSSSEEEEECTTT-----------CCEEEEEEC
T ss_pred             CcCcEEEEEeCCCc--eeEEecCCCEEEEECCCCEEEEEcCCC-----------CeEEEEEEe
Confidence            99999988886543  234457888888887788999999998           676766654

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.47  E-value=0.00014  Score=64.53  Aligned_cols=175  Identities=9%  Similarity=-0.064  Sum_probs=96.5

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEE----------EEecC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNV----------LRGHK  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~----------~~~~~  363 (537)
                      +.|+.++++............+......+..++++|+++.|+.+. .++.|..+++.. ......          +...+
T Consensus        10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~p~~ia~d~   88 (267)
T 1npe_A           10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG-GEPTTIIRQDLGSPEGIALDH   88 (267)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSS-CCCEEEECTTCCCEEEEEEET
T ss_pred             CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCC-CCcEEEEECCCCCccEEEEEe
Confidence            478888887654210000000111123467999999766665554 567899999873 322222          22222


Q ss_pred             C-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEE
Q psy10942        364 K-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLW  439 (537)
Q Consensus       364 ~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~  439 (537)
                      . +..+++-...+.|.++++..........            ...     .....++++|++..|..+..   .+.|..+
T Consensus        89 ~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~------------~~~-----~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~  151 (267)
T 1npe_A           89 LGRTIFWTDSQLDRIEVAKMDGTQRRVLFD------------TGL-----VNPRGIVTDPVRGNLYWTDWNRDNPKIETS  151 (267)
T ss_dssp             TTTEEEEEETTTTEEEEEETTSCSCEEEEC------------SSC-----SSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred             cCCeEEEEECCCCEEEEEEcCCCCEEEEEE------------CCC-----CCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence            2 2333333445566666654322111111            000     15678889997666655554   3688888


Q ss_pred             ECCCceeeeEee-cCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942        440 CLTDYVCLKSLE-GHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC  488 (537)
Q Consensus       440 d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~  488 (537)
                      ++... ....+. ........+++++++..|+.+. ..+.|.+++......
T Consensus       152 ~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~  201 (267)
T 1npe_A          152 HMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR  201 (267)
T ss_dssp             ETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred             ecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence            87542 222222 2234578999999877665554 567899999875443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.46  E-value=0.00036  Score=61.76  Aligned_cols=199  Identities=11%  Similarity=0.047  Sum_probs=113.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCcee---------
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKL---------  355 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~---------  355 (537)
                      ..+++-..++.|..++..+..... .    ..........++++|++..|+.+ ...+.|.++++......         
T Consensus        49 ~ly~~d~~~~~I~~~~~~g~~~~~-~----~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~  123 (267)
T 1npe_A           49 VVYWTDISEPSIGRASLHGGEPTT-I----IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVN  123 (267)
T ss_dssp             EEEEEETTTTEEEEEESSSCCCEE-E----ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSS
T ss_pred             EEEEEECCCCEEEEEecCCCCcEE-E----EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCC
Confidence            345555567899999987654311 1    11222467899999976655554 45678999998732111         


Q ss_pred             eEEEEecCCCCEEEEEcC---CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942        356 LNVLRGHKKGTQIVSTGA---DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-  431 (537)
Q Consensus       356 ~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  431 (537)
                      ...+..++++..+..+..   .+.|..+++.... ...+           ....     ......++++|++..|..+. 
T Consensus       124 P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~-----------~~~~-----~~~P~gia~d~~~~~lyv~d~  186 (267)
T 1npe_A          124 PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRIL-----------AQDN-----LGLPNGLTFDAFSSQLCWVDA  186 (267)
T ss_dssp             EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEE-----------ECTT-----CSCEEEEEEETTTTEEEEEET
T ss_pred             ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEE-----------EECC-----CCCCcEEEEcCCCCEEEEEEC
Confidence            112222332233222221   2445555443211 1111           0000     01567899999877666555 


Q ss_pred             CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCeeEEEecCCc-cceeccCCCCCCc
Q psy10942        432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHA-LKIRNSDSENDHK  509 (537)
Q Consensus       432 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~  509 (537)
                      ..+.|.++|.........+.. ......++..  +..|+.+. ..+.|.++|..+++.+..+.... ...          
T Consensus       187 ~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p----------  253 (267)
T 1npe_A          187 GTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRL----------  253 (267)
T ss_dssp             TTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCC----------
T ss_pred             CCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccccccc----------
Confidence            457899999976544433332 2334566654  44555444 56899999999999888876433 223          


Q ss_pred             cccccceeeecCCC
Q psy10942        510 GFGLPRQLCSRNSD  523 (537)
Q Consensus       510 ~~~~~~~~~s~~~~  523 (537)
                       ..+   ++.|++.
T Consensus       254 -~gi---~~~~~~~  263 (267)
T 1npe_A          254 -YGI---TIALSQC  263 (267)
T ss_dssp             -CCE---EEECSCC
T ss_pred             -cee---eecCccC
Confidence             677   8888875

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.44  E-value=8.1e-05  Score=68.11  Aligned_cols=80  Identities=10%  Similarity=-0.121  Sum_probs=54.2

Q ss_pred             eeeEEEEcCCCCEEEEE-eCCCcEEEEECCCce--eeeEeecCCcceEEEEEecCCCEEEEEeC----------CCcEEE
Q psy10942        414 GVWFVNFSPLDRILISS-SGDATIKLWCLTDYV--CLKSLEGHDASVLRCHFINKGTQIVSTGA----------DGLLKL  480 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~v~v  480 (537)
                      ....++++|++++|..+ ..++.|..|++....  ....+....+ ...+++.++|++.++...          .+.|..
T Consensus       186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~  264 (322)
T 2fp8_A          186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIK  264 (322)
T ss_dssp             CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEE
T ss_pred             cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEE
Confidence            45678999999876666 456899999987421  1111211223 688999999987776654          467888


Q ss_pred             EECCCCeeEEEecCC
Q psy10942        481 WSIKTSTCVSTFDKH  495 (537)
Q Consensus       481 wd~~~~~~~~~~~~~  495 (537)
                      +|. .++.+..+...
T Consensus       265 ~d~-~G~~~~~~~~~  278 (322)
T 2fp8_A          265 FDE-FGNILEVIPLP  278 (322)
T ss_dssp             ECT-TSCEEEEEECC
T ss_pred             ECC-CCCEEEEEECC
Confidence            886 57777777544

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.28  E-value=0.00041  Score=62.79  Aligned_cols=211  Identities=8%  Similarity=-0.007  Sum_probs=116.3

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEe---
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRG---  361 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~---  361 (537)
                      ++++-..++.|..||..+....  .    . ........++++++|+++++.....  .|..++.. ..+.......   
T Consensus        45 lyv~d~~~~~I~~~d~~g~~~~--~----~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~~~  116 (306)
T 2p4o_A           45 IFVTNHEVGEIVSITPDGNQQI--H----A-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLPDA  116 (306)
T ss_dssp             EEEEETTTTEEEEECTTCCEEE--E----E-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECTTC
T ss_pred             EEEEeCCCCeEEEECCCCceEE--E----E-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCCCc
Confidence            4444456788888887764321  1    1 1124578999999999666554332  36666655 3333222111   


Q ss_pred             --------cCCCCEEEEEcCCCcEEEEECCCCee-eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942        362 --------HKKGTQIVSTGADGLLKLWSIKTSTC-VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-  431 (537)
Q Consensus       362 --------~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  431 (537)
                              ...+..+++-..++.|..+|..+++. +.........     ..+.+...   ....+  +|++++|..+. 
T Consensus       117 ~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~-----~~~~~~~~---~pngi--s~dg~~lyv~d~  186 (306)
T 2p4o_A          117 IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR-----SNSESVFP---AANGL--KRFGNFLYVSNT  186 (306)
T ss_dssp             SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC-----SSTTCCSC---SEEEE--EEETTEEEEEET
T ss_pred             cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc-----ccccCCCC---cCCCc--CcCCCEEEEEeC
Confidence                    11122344444577888888765421 1111000000     00000000   22334  77887666554 


Q ss_pred             CCCcEEEEECCC-cee--eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--EecCCccceeccCCCC
Q psy10942        432 GDATIKLWCLTD-YVC--LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS--TFDKHALKIRNSDSEN  506 (537)
Q Consensus       432 ~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~--~~~~~~~~i~~~~~~~  506 (537)
                      ..+.|..|++.. ++.  ...+.. ......++++++|+++++....+.|.+++.. ++...  .+.......       
T Consensus       187 ~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p-------  257 (306)
T 2p4o_A          187 EKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS-------  257 (306)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE-------
T ss_pred             CCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc-------
Confidence            567899999864 321  112211 1345678999999887777778899999974 66532  222222233       


Q ss_pred             CCccccccceeee---cCCCEEEEEeCC
Q psy10942        507 DHKGFGLPRQLCS---RNSDCEYRGGWS  531 (537)
Q Consensus       507 ~~~~~~~~~~~~s---~~~~~l~s~~~d  531 (537)
                          +++   +|.   ||++.|+.++..
T Consensus       258 ----~~~---a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          258 ----TAV---AFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             ----EEE---EECCSTTTTTEEEEEECT
T ss_pred             ----eEE---EEecccCCCCEEEEECCC
Confidence                677   998   898888776543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.23  E-value=0.0057  Score=61.00  Aligned_cols=130  Identities=10%  Similarity=-0.045  Sum_probs=70.1

Q ss_pred             eEEEecCcceEEEEEcCccc--eeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehh-hhcC
Q psy10942         18 FSVHCGRDKVLFTWDLSSRK--QLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKEL-YQHG   94 (537)
Q Consensus        18 ~l~s~~~~g~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~-~~~~   94 (537)
                      +|+-+.. ..|+.-|+....  .....+......++  .+.+.       ++.++++-...+.|..+++...... ..+.
T Consensus        11 ~~~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~~~~l--d~~~~-------~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~   80 (619)
T 3s94_A           11 LLLYANR-RDLRLVDATNGKENATIVVGGLEDAAAV--DFVFS-------HGLIYWSDVSEEAIKRTEFNKTESVQNVVV   80 (619)
T ss_dssp             CEEEECS-SBEEEECCC---------CBCCSCEEEE--EEETT-------TTEEEEEETTTTEEEEEEC-----CEEEEC
T ss_pred             eEEEecc-ccEEEEeCCCCcceEEEEEcCCCceEEE--EEEeC-------CCEEEEEECCCCeEEEEEccCCCceEEEEe
Confidence            3444433 458888887653  22223333344444  45664       5566666666788888888755321 1122


Q ss_pred             -CCcceEEEEEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         95 -LSSPLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        95 -~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                       .-.....+++.+.++.|+.+ ...+.|.+.++++           ......+...-.....+++. +.++.|+.+.
T Consensus        81 ~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG-----------~~~~~l~~~~l~~P~~Iavd-p~~g~ly~tD  145 (619)
T 3s94_A           81 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG-----------SLRKVLFWQELDQPRAIALD-PSSGFMYWTD  145 (619)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-----------CSCEEEECSSCSCCCCEEEE-TTTTEEEEEE
T ss_pred             CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC-----------CCEEEEEeCCCCCCceEEEe-cCCCeEEEec
Confidence             22578999999966655544 4567899999887           22222222333446788888 4445555543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.21  E-value=0.00039  Score=60.14  Aligned_cols=204  Identities=12%  Similarity=0.056  Sum_probs=115.8

Q ss_pred             cccccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEccCCceeeEEEEe-----------cCCCCEEEEEcCCCcEEEEEC
Q psy10942        315 HKKGHEKDINCVTVSPNDKLLA-SGSLDKTVKVWSTTGGLKLLNVLRG-----------HKKGTQIVSTGADGLLKLWSI  382 (537)
Q Consensus       315 ~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~-----------~~~~~~l~~~~~d~~i~i~d~  382 (537)
                      .+.+-...+..++++|+++.|+ +...++.|...|+.  ++.++.+..           ..++.++++.-.++.+.++++
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            3445556799999999876555 46677888888876  455555432           233555556556778888877


Q ss_pred             CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---ceeeeEee-------c
Q psy10942        383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---YVCLKSLE-------G  452 (537)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~  452 (537)
                      .....+........+   +...+.     -.....++|+|+++.|.++.......+|.+..   ...+..+.       .
T Consensus        99 ~~~~~i~~~~~~~~~---~~~~~~-----N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~  170 (255)
T 3qqz_A           99 TPNSEVKILKKIKIP---LQESPT-----NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF  170 (255)
T ss_dssp             CTTCCEEEEEEEECC---CSSCCC-----SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred             CCCCeeeeeeeeccc---cccccc-----cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence            654422111100000   000011     11678899999998777777665556665531   11122221       1


Q ss_pred             CCcceEEEEEecCCC-EEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942        453 HDASVLRCHFINKGT-QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS  531 (537)
Q Consensus       453 ~~~~v~~~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d  531 (537)
                      +...+.+++++|... +++.....+.+.++|. +|+.+..+.-..+.-  .-...-.++-.|   +|.++|++. .+++-
T Consensus       171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~--~l~~~~~qpEGi---a~d~~G~ly-IvsE~  243 (255)
T 3qqz_A          171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSR--GLSHNIKQAEGV---AMDASGNIY-IVSEP  243 (255)
T ss_dssp             CSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGG--GCSSCCCSEEEE---EECTTCCEE-EEETT
T ss_pred             ccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccC--CcccccCCCCee---EECCCCCEE-EEcCC
Confidence            234578999999654 5555556778899996 466666554322100  000111233667   999999844 44665


Q ss_pred             CCEE
Q psy10942        532 PQVV  535 (537)
Q Consensus       532 g~i~  535 (537)
                      +.+.
T Consensus       244 n~~y  247 (255)
T 3qqz_A          244 NRFY  247 (255)
T ss_dssp             TEEE
T ss_pred             ceEE
Confidence            5443

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.21  E-value=0.00084  Score=66.53  Aligned_cols=140  Identities=6%  Similarity=0.009  Sum_probs=85.6

Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc-CCCC---EEEEEeCCCcEEEEECCCceeeeEe
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS-PLDR---ILISSSGDATIKLWCLTDYVCLKSL  450 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~  450 (537)
                      +.|..+|..+++.+..++......+.... +      ..++. +... .+|+   .++.++.+|.++++|..+++.+..+
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~-~------~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~  362 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSG-N------NELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF  362 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCC-C------CCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccC-C------CCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence            57899999999988776542211110000 0      00111 1111 4563   6888899999999999999988766


Q ss_pred             ecCCc-------------ce--------------------------------EEEEEecCCCEEEEEe------------
Q psy10942        451 EGHDA-------------SV--------------------------------LRCHFINKGTQIVSTG------------  473 (537)
Q Consensus       451 ~~~~~-------------~v--------------------------------~~~~~s~~~~~l~s~~------------  473 (537)
                      .....             ++                                ..++++|+..++++..            
T Consensus       363 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~  442 (582)
T 1flg_A          363 PFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEV  442 (582)
T ss_dssp             ESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCC
T ss_pred             ccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccc
Confidence            53320             00                                1346677655554432            


Q ss_pred             ---------------------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942        474 ---------------------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP  532 (537)
Q Consensus       474 ---------------------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg  532 (537)
                                           .+|.|.-||+.+|+.+....... +.           ..-   .....+.+++.++.||
T Consensus       443 ~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~-----------~~g---~~~tagglvf~g~~dg  507 (582)
T 1flg_A          443 SYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PL-----------WAG---VLATAGNLVFTGTGDG  507 (582)
T ss_dssp             CCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CC-----------CSC---CEEETTTEEEEECTTS
T ss_pred             cccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CC-----------ccc---ceEeCCCEEEEECCCC
Confidence                                 25789999999999887765432 22           222   3444677888888888


Q ss_pred             CEEeC
Q psy10942        533 QVVVY  537 (537)
Q Consensus       533 ~i~vW  537 (537)
                      .++.|
T Consensus       508 ~l~A~  512 (582)
T 1flg_A          508 YFKAF  512 (582)
T ss_dssp             EEEEE
T ss_pred             cEEEE
Confidence            88753

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.20  E-value=0.012  Score=63.17  Aligned_cols=114  Identities=15%  Similarity=0.076  Sum_probs=68.7

Q ss_pred             eeeeeeeeeccCC----cceEEEecC-cceEEEEEcCccceeeeecccc--ccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942          3 FCVTCFDVIPQIT----SEFSVHCGR-DKVLFTWDLSSRKQLRSYPAYE--SLETCAVFHLSDETESKSGGKTFVLAGGE   75 (537)
Q Consensus         3 ~~V~~~~~~~~~~----~~~l~s~~~-~g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (537)
                      .-|+|+++.|.++    +++++.|.. |++|+|+++.+.+.+.......  ....+.+....        +..++.++-.
T Consensus       554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~--------~~~~L~igl~  625 (1158)
T 3ei3_A          554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFE--------SSHYLLCALG  625 (1158)
T ss_dssp             SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEET--------TEEEEEEEET
T ss_pred             CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeC--------CCcEEEEEeC
Confidence            3589999986554    468888885 9999999999877776544322  33444333332        5578889988


Q ss_pred             cceEEeeecc--ceehhh---hcCCCcceEEEEEeccccEEEEEeCCceEEEEe
Q psy10942         76 KSLLHYYETS--AVKELY---QHGLSSPLVRIVRSSVKRMYAVVTADHNISLYR  124 (537)
Q Consensus        76 ~~~i~~wd~~--~~~~~~---~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd  124 (537)
                      ||.+..+.+.  +|+...   ..-+..++.-..|...|..-+.+..+....++.
T Consensus       626 dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~  679 (1158)
T 3ei3_A          626 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYS  679 (1158)
T ss_dssp             TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEE
T ss_pred             CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEE
Confidence            9987666543  343321   122334555555554444433444445444554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.19  E-value=0.0072  Score=60.35  Aligned_cols=181  Identities=7%  Similarity=-0.115  Sum_probs=100.8

Q ss_pred             CcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC-CcceEEE
Q psy10942         24 RDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL-SSPLVRI  102 (537)
Q Consensus        24 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-~~~v~~~  102 (537)
                      ....|+.-|+++.+....++....-...++.+.+.       ++.++++-..++.|..+++........+.. -.....+
T Consensus        13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~-------~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl   85 (628)
T 4a0p_A           13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVT-------DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM   85 (628)
T ss_dssp             ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT-------TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred             eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECC-------CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence            44569999998766544555332222233355665       556777777788899888865433222222 2467789


Q ss_pred             EEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942        103 VRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGL  181 (537)
Q Consensus       103 ~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~  181 (537)
                      ++.+.+..|..+ ...+.|.+.++++.           .....+...-.....+++. |..+.|..+.....  +.|   
T Consensus        86 AvD~~~~~LY~tD~~~~~I~v~~~dG~-----------~~~~l~~~~l~~P~~iavd-p~~G~lY~tD~g~~--~~I---  148 (628)
T 4a0p_A           86 AVDWLGKNLYWADTGTNRIEVSKLDGQ-----------HRQVLVWKDLDSPRALALD-PAEGFMYWTEWGGK--PKI---  148 (628)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTST-----------TCEEEECSSCCCEEEEEEE-TTTTEEEEEECSSS--CEE---
T ss_pred             EEEeCCCEEEEEECCCCEEEEEecCCC-----------cEEEEEeCCCCCcccEEEc-cCCCeEEEeCCCCC--CEE---
Confidence            998766655444 45678888888762           2111222222346788888 44455555432211  224   


Q ss_pred             eecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccc
Q psy10942        182 VKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKR  259 (537)
Q Consensus       182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~  259 (537)
                                    ...++       ...... +-     ..  -.....+   +++++++.|+.+ ...+.|.  ..++
T Consensus       149 --------------~r~~~-------dG~~~~~l~-----~~--~~~P~Gl---alD~~~~~LY~aD~~~~~I~--~~d~  195 (628)
T 4a0p_A          149 --------------DRAAM-------DGSERTTLV-----PN--VGRANGL---TIDYAKRRLYWTDLDTNLIE--SSNM  195 (628)
T ss_dssp             --------------EEEET-------TSCSCEEEE-----CS--CSSEEEE---EEETTTTEEEEEETTTTEEE--EEET
T ss_pred             --------------EEEeC-------CCCceEEEE-----CC--CCCcceE---EEccccCEEEEEECCCCEEE--EEcC
Confidence                          22222       222222 22     22  3456788   888876665544 4456676  6676


Q ss_pred             cC
Q psy10942        260 KT  261 (537)
Q Consensus       260 ~~  261 (537)
                      +.
T Consensus       196 dG  197 (628)
T 4a0p_A          196 LG  197 (628)
T ss_dssp             TS
T ss_pred             CC
Confidence            55

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.11  E-value=0.0022  Score=60.05  Aligned_cols=180  Identities=7%  Similarity=-0.062  Sum_probs=94.2

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEec-CCCCEEEEE
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGH-KKGTQIVST  371 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~l~~~  371 (537)
                      ...|+..++.+.....      +......+..++|++.++.|+.. ...+.|+.+++. +......+... ....-++..
T Consensus        95 ~~~I~~i~~~~~~~~~------~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd  167 (386)
T 3v65_B           95 RIDIRQVLPHRSEYTL------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVD  167 (386)
T ss_dssp             BSCEEEECTTSCCCEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCEEEEECSSCSCCCCEEEE
T ss_pred             CccceeeccCCCcEEE------EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecC-CCCcEEEEeCCCCCccEEEEE
Confidence            3568888887654321      11223457899999866655554 456789999987 33322222111 111122222


Q ss_pred             cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C-CcEEEEECCCceeeeE
Q psy10942        372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D-ATIKLWCLTDYVCLKS  449 (537)
Q Consensus       372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~  449 (537)
                      ..++.+++-|...... ..+........ .......     .....++++|.+..|+.... . +.|..+++........
T Consensus       168 ~~~g~lY~~d~~~~~I-~~~~~dg~~~~-~l~~~~l-----~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~  240 (386)
T 3v65_B          168 WVHDKLYWTDSGTSRI-EVANLDGAHRK-VLLWQSL-----EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII  240 (386)
T ss_dssp             TTTTEEEEEETTTTEE-EECBTTSCSCE-EEECSSC-----SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred             eCCCeEEEEcCCCCeE-EEEeCCCCceE-EeecCCC-----CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence            2334444444332211 11111110000 0111100     14677888887766665543 3 6788888765333222


Q ss_pred             eecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCe
Q psy10942        450 LEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTST  487 (537)
Q Consensus       450 ~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~  487 (537)
                      ........+.++++|++..|+.+. ..+.|..+++....
T Consensus       241 ~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~  279 (386)
T 3v65_B          241 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH  279 (386)
T ss_dssp             ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred             EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence            333334578999998766666554 46779999986433

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.09  E-value=0.00019  Score=72.68  Aligned_cols=268  Identities=11%  Similarity=0.006  Sum_probs=134.8

Q ss_pred             Cccc-CCCeeeeccCCC-----------cceeccccccCCCcccccccccccceee-eee-CCcceEEEEEe-CCCeEEE
Q psy10942        235 KTVK-EEDLFPRQSMEP-----------STLEELEKRKTYHFPLFGIFVPEAEHGA-FYT-GGTVELLASGS-LDKTVKV  299 (537)
Q Consensus       235 ~~s~-~~~~l~~~~~d~-----------~i~~~iw~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~l~~~~-~d~~i~i  299 (537)
                      ++.+ +++.++.|+.+.           .+.  +||...........+..+..... ... ...-.+++.|+ .+..+.+
T Consensus       192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~--~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTS--SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEETTTTEEEEEEECCCTTTCSCCCSEEEEE--EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             EEEecCCEEEEEecccccccccCCCCeEEEE--EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            4566 788888876543           355  78877654221111100000000 000 00015667776 4568999


Q ss_pred             EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CC-----CcEEEEEccCCceeeEEEE--------ec---
Q psy10942        300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LD-----KTVKVWSTTGGLKLLNVLR--------GH---  362 (537)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~~~--------~~---  362 (537)
                      ||..+.+-..   ...+.... .-.+++..+++++++.|+ .+     ..+.+||.. ...-. .+.        ..   
T Consensus       270 yd~~t~~W~~---~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~W~-~~~~~~~~p~~~~~~~  343 (656)
T 1k3i_A          270 YDSSSDSWIP---GPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS-SKTWT-SLPNAKVNPMLTADKQ  343 (656)
T ss_dssp             EEGGGTEEEE---CCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT-TTEEE-EETTSCSGGGCCCCTT
T ss_pred             ecCcCCceeE---CCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCC-CCcce-eCCCcccccccccccc
Confidence            9998765321   11111111 123455667999999988 34     568999987 33322 210        00   


Q ss_pred             ----CCCCEEEEEcCCC---------cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc-CCCCEEE
Q psy10942        363 ----KKGTQIVSTGADG---------LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS-PLDRILI  428 (537)
Q Consensus       363 ----~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~  428 (537)
                          .++..++.++.+|         .+..||..+..............   ...+.. .    .-.++.|. .++++++
T Consensus       344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~---~~~~~~-~----~~~av~~~~~~~~i~v  415 (656)
T 1k3i_A          344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR---GVAPDA-M----CGNAVMYDAVKGKILT  415 (656)
T ss_dssp             GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT---EECCCC-B----TCEEEEEETTTTEEEE
T ss_pred             ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc---ccCCCC-C----CCceEeccCCCCeEEE
Confidence                1234445555444         45566666554322111000000   000000 0    12334443 3677888


Q ss_pred             EEeCCC-----------cEEEEECCCceeeeEe--ecCCcce-EEEEEecCCCEEEEEeCC-----------CcEEEEEC
Q psy10942        429 SSSGDA-----------TIKLWCLTDYVCLKSL--EGHDASV-LRCHFINKGTQIVSTGAD-----------GLLKLWSI  483 (537)
Q Consensus       429 ~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~s~~~~~l~s~~~d-----------g~v~vwd~  483 (537)
                      .|+.++           .|.+||..+.+.....  ..+.... .+++..|++++++.|+.+           ..+.+||.
T Consensus       416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp  495 (656)
T 1k3i_A          416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP  495 (656)
T ss_dssp             ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred             EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence            887532           6788887765443322  2122222 345667899999999854           46899998


Q ss_pred             CCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        484 KTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       484 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      .+.+-.. +.....+- ..       -...   .+.|||+.++.||.
T Consensus       496 ~t~~W~~-~~~~~~~R-~~-------hs~a---~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          496 EQDTFYK-QNPNSIVR-VY-------HSIS---LLLPDGRVFNGGGG  530 (656)
T ss_dssp             GGTEEEE-CCCCSSCC-CT-------TEEE---EECTTSCEEEEECC
T ss_pred             CCCceee-cCCCCCcc-cc-------ccHh---hcCCCcEEEecCCC
Confidence            7765322 21111000 00       0122   46789999999885

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.06  E-value=0.0062  Score=56.09  Aligned_cols=169  Identities=5%  Similarity=-0.052  Sum_probs=93.6

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEE----------ec
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLR----------GH  362 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~----------~~  362 (537)
                      ...|+..++.+.....      +......+..++|++.++.|+... ..+.|+.+++... .....+.          ..
T Consensus        52 ~~~I~~i~~~g~~~~~------~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~-~~~~~~~~~~~~p~glavd  124 (349)
T 3v64_C           52 RIDIRQVLPHRSEYTL------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-NVEEVVSTGLESPGGLAVD  124 (349)
T ss_dssp             BSCEEEECTTSCCEEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEE
T ss_pred             ccceEEEeCCCCeeEE------eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC-CceEEEeCCCCCccEEEEe
Confidence            3457777877654321      112234578999998666666554 5678888988732 2222221          11


Q ss_pred             C-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C-CcEEEE
Q psy10942        363 K-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D-ATIKLW  439 (537)
Q Consensus       363 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d-g~i~i~  439 (537)
                      . .+.++++-...+.|.+.++........+.....                 ....++++|.+..|..... + +.|..+
T Consensus       125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~-----------------~P~~iavdp~~g~ly~td~~~~~~I~r~  187 (349)
T 3v64_C          125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----------------KPRAIALHPMEGTIYWTDWGNTPRIEAS  187 (349)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS-----------------CEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred             cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC-----------------CcceEEEecCcCeEEEeccCCCCEEEEE
Confidence            1 123333334444555555443221111111111                 4577888886665555543 3 678888


Q ss_pred             ECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10942        440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTS  486 (537)
Q Consensus       440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~  486 (537)
                      ++........+.......+.++++|++..|+.+. ..+.|..+++...
T Consensus       188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~  235 (349)
T 3v64_C          188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS  235 (349)
T ss_dssp             ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence            8764332222222334578999998777666554 4678999998643

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.03  E-value=0.00011  Score=74.55  Aligned_cols=62  Identities=11%  Similarity=-0.001  Sum_probs=41.3

Q ss_pred             CcEEEEEeCccc-----------eEEeeeccceehhhh--cC--CCcceEEEEEeccccEEEEEeC-CceEEEEeccc
Q psy10942         66 GKTFVLAGGEKS-----------LLHYYETSAVKELYQ--HG--LSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNS  127 (537)
Q Consensus        66 ~~~~~~~~~~~~-----------~i~~wd~~~~~~~~~--~~--~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~  127 (537)
                      ++++++.+|.+.           .+.+||+.+++-...  +.  ......++++.++++.+++|+. +..+.+||..+
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t  274 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS  274 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC
Confidence            456666665332           588999988753221  11  1123445778899999999884 45799999887

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.95  E-value=0.013  Score=55.00  Aligned_cols=171  Identities=6%  Similarity=-0.075  Sum_probs=96.0

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc---eeeEEEE---------
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGL---KLLNVLR---------  360 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~---~~~~~~~---------  360 (537)
                      ...|+..++.......      +......+..++|++.++.|+... ..+.|+.+++....   .....+.         
T Consensus        91 ~~~I~~i~l~~~~~~~------~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl  164 (400)
T 3p5b_L           91 RHEVRKMTLDRSEYTS------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL  164 (400)
T ss_dssp             TTEEEEECTTSCSCEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred             cceeEEEccCCcceeE------eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence            4688888888764321      123345688999998766666554 56788888887311   1111111         


Q ss_pred             -ecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942        361 -GHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI  436 (537)
Q Consensus       361 -~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i  436 (537)
                       ... .+.++++-...+.|.+.++........+.....                 ....++++|.+.+|+....  .+.|
T Consensus       165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-----------------~P~~iavdp~~g~ly~td~~~~~~I  227 (400)
T 3p5b_L          165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI  227 (400)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC-----------------CEEEEEEETTTTEEEEEECSSSCCE
T ss_pred             EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC-----------------CcceEEEecccCeEEEEeCCCCCEE
Confidence             111 122333333344444444433222111111111                 4677888887666666553  3688


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCe
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTST  487 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~  487 (537)
                      ...++........+...-...+.|++++++..|+.+. ..+.|..+|++...
T Consensus       228 ~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~  279 (400)
T 3p5b_L          228 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN  279 (400)
T ss_dssp             EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred             EEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence            8888865433333333335678999999877777664 45789999986443

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.95  E-value=0.00082  Score=61.35  Aligned_cols=149  Identities=7%  Similarity=-0.016  Sum_probs=86.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee-----------------------------EEEEecCCCCEEEEEc
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL-----------------------------NVLRGHKKGTQIVSTG  372 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-----------------------------~~~~~~~~~~~l~~~~  372 (537)
                      ...++++++++++++++..++.|..|+... ....                             ..+...++...++.+.
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d   98 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPN-SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD   98 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTT-TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCC-CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence            346788999998788888889999998763 2211                             1122222122333333


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeC-----------------CC
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSG-----------------DA  434 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~-----------------dg  434 (537)
                      ..+.+..+|..+++. ..+          .-...+..  ......+++.+ +|++.++-..                 ++
T Consensus        99 ~~~~i~~~d~~~g~~-~~~----------~~~~~~~~--~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g  165 (322)
T 2fp8_A           99 CYYHLSVVGSEGGHA-TQL----------ATSVDGVP--FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTG  165 (322)
T ss_dssp             TTTEEEEECTTCEEC-EEE----------ESEETTEE--CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCCEE-EEe----------cccCCCCc--ccccceEEEecCCCEEEEECCcccccccccceehcccCCCc
Confidence            333355565544321 111          10001100  01467788999 8887666432                 36


Q ss_pred             cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE-eCCCcEEEEECCC
Q psy10942        435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST-GADGLLKLWSIKT  485 (537)
Q Consensus       435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~v~vwd~~~  485 (537)
                      .|..||..+++....... ......++++|++++|+.+ +..+.|.+|++..
T Consensus       166 ~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          166 RLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             EEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             eEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence            788889876654332222 2345779999999866655 5568899999864

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.93  E-value=0.0066  Score=57.68  Aligned_cols=180  Identities=8%  Similarity=0.032  Sum_probs=96.4

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEEccCCceeeEEEE-
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-K----TVKVWSTTGGLKLLNVLR-  360 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~----~i~i~d~~~~~~~~~~~~-  360 (537)
                      .|......+.|+.+|+.++....      +.........++|+++++.|+++... +    .+..++..........+. 
T Consensus       151 ~Lyv~d~~~~I~~id~~~~~v~~------~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~  224 (430)
T 3tc9_A          151 HLYLVGEQHPTRLIDFEKEYVST------VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK  224 (430)
T ss_dssp             EEEEEEBTEEEEEEETTTTEEEE------EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE
T ss_pred             eEEEEeCCCcEEEEECCCCEEEE------EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc
Confidence            34444444788899988765321      11234567899999999966666542 2    344445442222112222 


Q ss_pred             --------ecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942        361 --------GHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS  431 (537)
Q Consensus       361 --------~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  431 (537)
                              .++ ++.++++-..++.|..++...+......           ..+..     .....++|+|++++|....
T Consensus       225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-----------~~~~~-----~~P~gia~~pdG~~lyv~d  288 (430)
T 3tc9_A          225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-----------TIQDS-----GWEFHIQFHPSGNYAYIVV  288 (430)
T ss_dssp             CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-----------ECSSS-----SCCEEEEECTTSSEEEEEE
T ss_pred             CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------EcCCC-----CcceeEEEcCCCCEEEEEE
Confidence                    233 3455555555667777776654431111           11111     1466799999999555554


Q ss_pred             -CCCcEEEEECCC--cee--eeEeecC---------------CcceE-EEEEe--------cCCCEEEEEeCCCcEEEEE
Q psy10942        432 -GDATIKLWCLTD--YVC--LKSLEGH---------------DASVL-RCHFI--------NKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       432 -~dg~i~i~d~~~--~~~--~~~~~~~---------------~~~v~-~~~~s--------~~~~~l~s~~~dg~v~vwd  482 (537)
                       .++.|..++...  ++.  +..+.+.               -.... .++..        +++.++++-...+.|+.++
T Consensus       289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~  368 (430)
T 3tc9_A          289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT  368 (430)
T ss_dssp             TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred             CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence             567898887653  221  1222211               01123 45543        3355555555667889888


Q ss_pred             CCCCeeE
Q psy10942        483 IKTSTCV  489 (537)
Q Consensus       483 ~~~~~~~  489 (537)
                       .+|+..
T Consensus       369 -~~G~v~  374 (430)
T 3tc9_A          369 -PQGRVT  374 (430)
T ss_dssp             -TTSEEE
T ss_pred             -CCCcEE
Confidence             456544

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.87  E-value=0.001  Score=68.38  Aligned_cols=148  Identities=11%  Similarity=0.023  Sum_probs=84.4

Q ss_pred             CeEEEEEc-CCCCEEEEEeC-CC----cEEEEEccCC-cee---eE----EEEecCCCCEEEEEcCC-----CcEEEEEC
Q psy10942        322 DINCVTVS-PNDKLLASGSL-DK----TVKVWSTTGG-LKL---LN----VLRGHKKGTQIVSTGAD-----GLLKLWSI  382 (537)
Q Consensus       322 ~v~~~~~s-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~---~~----~~~~~~~~~~l~~~~~d-----~~i~i~d~  382 (537)
                      .+...+|| |||++|+.+.. +|    .|+++|+.++ ...   +.    .+...++++.|+....+     ..|.++++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l  254 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM  254 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence            57889999 99998886543 22    4999999844 211   11    12334567666665544     25667777


Q ss_pred             CCCee--eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEEECCCc--ee--eeEeecC
Q psy10942        383 KTSTC--VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLWCLTDY--VC--LKSLEGH  453 (537)
Q Consensus       383 ~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~~~  453 (537)
                      .+++.  ...+..           ++..     ....+.|||||++|+....   ...|.++|+.++  +.  .......
T Consensus       255 gt~~~~~~lv~~~-----------~~~~-----~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~  318 (751)
T 2xe4_A          255 GKLQSEDVCLYEE-----------HNPL-----FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE  318 (751)
T ss_dssp             TSCGGGCEEEEEC-----------CCTT-----CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC
T ss_pred             CCCchhcEEEEec-----------CCCc-----eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC
Confidence            66532  111111           1111     2346788999988887653   346888898875  22  2222333


Q ss_pred             CcceEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10942        454 DASVLRCHFINKGTQIVSTGAD----GLLKLWSIKT  485 (537)
Q Consensus       454 ~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~  485 (537)
                      .+...++.|+.++.+++....+    ..|..+++.+
T Consensus       319 ~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          319 KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            4455566655444444444443    2566677654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.87  E-value=0.015  Score=52.72  Aligned_cols=177  Identities=8%  Similarity=-0.053  Sum_probs=93.2

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCC---ceeeEEEEec-CCCCEEE
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGG---LKLLNVLRGH-KKGTQIV  369 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~~~~-~~~~~l~  369 (537)
                      ..|+..++.+......      .........++|+++++.|+.+ ..++.|..+++...   ......+... ....-++
T Consensus        10 ~~I~~i~~~~~~~~~~------~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla   83 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSL------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA   83 (316)
T ss_dssp             SSEEEEETTSCCCEEE------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred             CeEEEEECCCcceEeh------hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence            5688899887653221      1223457899999876655555 45688999998731   1212222111 1112233


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEEEEECCCceee
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIKLWCLTDYVCL  447 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~~~~~  447 (537)
                      ....++.+++-|...+... .+.........+ .....     .....++++|.+..|+.....  +.|..+++.. ...
T Consensus        84 vd~~~~~ly~~d~~~~~I~-~~~~~g~~~~~~-~~~~~-----~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~  155 (316)
T 1ijq_A           84 VDWIHSNIYWTDSVLGTVS-VADTKGVKRKTL-FRENG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDI  155 (316)
T ss_dssp             EETTTTEEEEEETTTTEEE-EEETTSSSEEEE-EECTT-----CCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCE
T ss_pred             EeecCCeEEEEECCCCEEE-EEeCCCCceEEE-EECCC-----CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCe
Confidence            3223444444443332211 111111111111 11111     156788899876666555543  6788888754 333


Q ss_pred             eEe-ecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10942        448 KSL-EGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKT  485 (537)
Q Consensus       448 ~~~-~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~  485 (537)
                      ..+ ...-...+.+++++++..|+.+. ..+.|..+|+..
T Consensus       156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg  195 (316)
T 1ijq_A          156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (316)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence            333 22334578999999877776555 457899999864

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.83  E-value=0.0096  Score=53.70  Aligned_cols=183  Identities=9%  Similarity=-0.041  Sum_probs=98.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-------eEEEEecCCCCEEEEEcCC--CcEEEEECCCCeeeeee
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-------LNVLRGHKKGTQIVSTGAD--GLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~  391 (537)
                      .....++|+++++++++-..++.|..||.......       ...+...+++.++++....  ..|..+|..+++.....
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~  111 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL  111 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence            34678999999987777667888998887632111       1123334455554444332  23555565555432211


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee-eeEee---------cCCcceEEEE
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC-LKSLE---------GHDASVLRCH  461 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~---------~~~~~v~~~~  461 (537)
                      ..           +...     ....++..+++..+++-..++.|+.+|...++. +....         ......+.+ 
T Consensus       112 ~~-----------~~~~-----~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-  174 (306)
T 2p4o_A          112 TL-----------PDAI-----FLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-  174 (306)
T ss_dssp             EC-----------TTCS-----CEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred             eC-----------CCcc-----ccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence            11           1111     123344455555455444578899999875421 11110         111234555 


Q ss_pred             EecCCCEEEEEe-CCCcEEEEECCC-Cee--EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        462 FINKGTQIVSTG-ADGLLKLWSIKT-STC--VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       462 ~s~~~~~l~s~~-~dg~v~vwd~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                       +|++++|+.+. ..+.|..+++.. ++.  ...+.. ....           ..+   ++.++|+++++....+.|.+
T Consensus       175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P-----------~gi---~vd~dG~l~va~~~~~~V~~  237 (306)
T 2p4o_A          175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNI-----------DDF---AFDVEGNLYGATHIYNSVVR  237 (306)
T ss_dssp             -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCC-----------SSE---EEBTTCCEEEECBTTCCEEE
T ss_pred             -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCC-----------CCe---EECCCCCEEEEeCCCCeEEE
Confidence             88887666554 567899999864 321  111110 0112           566   89999987666555566654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.75  E-value=0.023  Score=51.41  Aligned_cols=171  Identities=8%  Similarity=-0.009  Sum_probs=94.0

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEe----------c
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRG----------H  362 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~----------~  362 (537)
                      ...|+..++.+.......+.    .......+++|++.++.|+.. ...+.|..+++.........+..          .
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~----~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd   87 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVV----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACD   87 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEE----EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEE
T ss_pred             cCeEEEEECCCCceEEEEEe----cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEE
Confidence            46788999887642111111    112346789999865555544 45678999998743211111111          1


Q ss_pred             -CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcEEEE
Q psy10942        363 -KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATIKLW  439 (537)
Q Consensus       363 -~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~  439 (537)
                       ..+..+++-...+.|.++++........+.....                 ....++++|.+..|+....  .+.|...
T Consensus        88 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~-----------------~P~giavdp~~g~ly~td~~~~~~I~r~  150 (318)
T 3sov_A           88 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD-----------------QPRAIALDPSSGFMYWTDWGEVPKIERA  150 (318)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----------------SEEEEEEEGGGTEEEEEECSSSCEEEEE
T ss_pred             cCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC-----------------CccEEEEeCCCCEEEEEecCCCCEEEEE
Confidence             1223333334445555555543221111111111                 4567888887666666553  5788888


Q ss_pred             ECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10942        440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKT  485 (537)
Q Consensus       440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~  485 (537)
                      ++............-...+.++++|++..|+.+. ..+.|..++++.
T Consensus       151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG  197 (318)
T 3sov_A          151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  197 (318)
T ss_dssp             ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence            8764322222222234568999999777666554 467899999864

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.74  E-value=0.01  Score=56.39  Aligned_cols=179  Identities=8%  Similarity=-0.025  Sum_probs=97.8

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEccCCce---eeEE-
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-----TVKVWSTTGGLK---LLNV-  358 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~---~~~~-  358 (537)
                      |..+...+.|+.++..++....      +.........++++++|+ |+.+...+     .+...+......   .+.. 
T Consensus       155 Lyv~D~~~~I~~id~~~g~v~~------~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~  227 (433)
T 4hw6_A          155 LYWVGQRDAFRHVDFVNQYVDI------KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNA  227 (433)
T ss_dssp             EEEECBTSCEEEEETTTTEEEE------ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEEC
T ss_pred             EEEEeCCCCEEEEECCCCEEEE------eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccccc
Confidence            3333333788888887665321      122344578999999999 55444321     233333331211   1111 


Q ss_pred             -----EEecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942        359 -----LRGHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-  431 (537)
Q Consensus       359 -----~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  431 (537)
                           +..++ ++.++++-..++.|+.+|..++.....+....         +..      ....++|+|++++|..+. 
T Consensus       228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~---------~~~------~~~~ia~dpdG~~LYvad~  292 (433)
T 4hw6_A          228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD---------TKG------SNFHIVWHPTGDWAYIIYN  292 (433)
T ss_dssp             SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS---------CCS------SCEEEEECTTSSEEEEEET
T ss_pred             CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC---------CCC------CcccEEEeCCCCEEEEEeC
Confidence                 22233 45555555566777777777665422211000         000      224689999998655554 


Q ss_pred             CCCcEEEEECC--Ccee--eeEeecC---------------CcceEEEEE---------ecCCCEEEEEeCCCcEEEEEC
Q psy10942        432 GDATIKLWCLT--DYVC--LKSLEGH---------------DASVLRCHF---------INKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       432 ~dg~i~i~d~~--~~~~--~~~~~~~---------------~~~v~~~~~---------s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      ..+.|+.++..  ++..  ...+.+.               -.....+++         .+++.++++-...+.|+.++.
T Consensus       293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence            46789998765  2221  1122211               123567899         667776666667788999985


Q ss_pred             CCCeeE
Q psy10942        484 KTSTCV  489 (537)
Q Consensus       484 ~~~~~~  489 (537)
                       +|...
T Consensus       373 -~G~v~  377 (433)
T 4hw6_A          373 -EGRVT  377 (433)
T ss_dssp             -TSEEE
T ss_pred             -CCCEE
Confidence             66543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.73  E-value=0.022  Score=53.20  Aligned_cols=183  Identities=10%  Similarity=-0.107  Sum_probs=97.7

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEccCCceeeEEE------
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS-GSLDKTVKVWSTTGGLKLLNVL------  359 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~------  359 (537)
                      ++++-...+.|..++..+..... +    ..........+++++.+..|+. -...+.|.+.++... .....+      
T Consensus       130 ly~~D~~~~~I~r~~~~g~~~~~-~----~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~-~~~~l~~~~l~~  203 (386)
T 3v65_B          130 VFWSDVTLDRILRANLNGSNVEE-V----VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLLWQSLEK  203 (386)
T ss_dssp             EEEEETTTTEEEEEETTSCCEEE-E----ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC-SCEEEECSSCSC
T ss_pred             EEEEeCCCCcEEEEecCCCCcEE-E----EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC-ceEEeecCCCCC
Confidence            45555566788888887654211 1    1111233467888876555544 445677888887632 211111      


Q ss_pred             ----EecCCCCEE-EEEcCC-CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942        360 ----RGHKKGTQI-VSTGAD-GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G  432 (537)
Q Consensus       360 ----~~~~~~~~l-~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~  432 (537)
                          ..++.+..| ++-... +.|..+++.............                 .....++++|++..|..+. .
T Consensus       204 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-----------------~~PnGlavd~~~~~lY~aD~~  266 (386)
T 3v65_B          204 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-----------------FWPNGLTIDYAGRRMYWVDAK  266 (386)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----------------SCEEEEEEEGGGTEEEEEETT
T ss_pred             CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-----------------CCeeeEEEeCCCCEEEEEECC
Confidence                122222222 222222 344444433221111111000                 1467899998776666655 4


Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      .+.|..+|+........+.........+++. .+.++++-...+.|..++..+|+.+..+.
T Consensus       267 ~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          267 HHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             TTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence            5789999986543333333334456778883 44555666667889999876776665554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.70  E-value=0.014  Score=52.52  Aligned_cols=181  Identities=15%  Similarity=0.232  Sum_probs=111.8

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC----CC---EEEEEeC---CCcEEEEEccCCceee
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN----DK---LLASGSL---DKTVKVWSTTGGLKLL  356 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~---~l~~~~~---d~~i~i~d~~~~~~~~  356 (537)
                      +++.....+-+.+||+ +++.+..     +.  .+.++.+..-|+    |+   ++++...   +++|.+|++......+
T Consensus        42 ~ii~t~k~~gL~Vydl-~G~~l~~-----~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l  113 (355)
T 3amr_A           42 KLITTNKKSGLVVYSL-DGKMLHS-----YN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (355)
T ss_dssp             EEEEEETTTEEEEEET-TSCEEEE-----EC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred             EEEEEcCCCCEEEEcC-CCcEEEE-----cc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence            4666667789999999 5554332     22  145666666552    22   2333333   5789999774111122


Q ss_pred             EEE--------------------EecCCCC-EEEEEcCCCcEEEEECC---C----CeeeeeeccCCcceEEEEEecCCC
Q psy10942        357 NVL--------------------RGHKKGT-QIVSTGADGLLKLWSIK---T----STCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       357 ~~~--------------------~~~~~~~-~l~~~~~d~~i~i~d~~---~----~~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      ..+                    +....+. ++++...+|.+..|++.   .    .+.++++....             
T Consensus       114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-------------  180 (355)
T 3amr_A          114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-------------  180 (355)
T ss_dssp             EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-------------
T ss_pred             eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-------------
Confidence            222                    1111232 57777778888888773   2    23444444332             


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-----CceeeeEee-cC-CcceEEEEEe--cCCC-EEEEEe-CCCc
Q psy10942        409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-----DYVCLKSLE-GH-DASVLRCHFI--NKGT-QIVSTG-ADGL  477 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~s--~~~~-~l~s~~-~dg~  477 (537)
                           .+..+...+....|+.+-++..|..++..     +++.+..+. ++ ...+..|++-  ++++ +|++++ .+++
T Consensus       181 -----q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s  255 (355)
T 3amr_A          181 -----QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS  255 (355)
T ss_dssp             -----CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred             -----CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence                 56778888888899999998777777755     345555442 22 2368888884  5555 666666 5679


Q ss_pred             EEEEECC-CCeeEEEec
Q psy10942        478 LKLWSIK-TSTCVSTFD  493 (537)
Q Consensus       478 v~vwd~~-~~~~~~~~~  493 (537)
                      ..+||.+ +.+.+..+.
T Consensus       256 ~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          256 YAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEEEESSTTCCEEEEEE
T ss_pred             EEEEECCCCCcEEEEEE
Confidence            9999996 677777775

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.67  E-value=0.0016  Score=56.27  Aligned_cols=110  Identities=13%  Similarity=0.183  Sum_probs=74.6

Q ss_pred             eeeeeeeeccCCcc-eEEEecCcceEEEEEcCccceeeeeccc--cccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942          4 CVTCFDVIPQITSE-FSVHCGRDKVLFTWDLSSRKQLRSYPAY--ESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH   80 (537)
Q Consensus         4 ~V~~~~~~~~~~~~-~l~s~~~~g~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (537)
                      .+..+++.  ++++ ++++..+++.|...|.+ ++.++.++..  ...+.+  .+.+        ++.++++.-.++.+.
T Consensus        28 ~lSGla~~--~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI--a~~~--------~g~~~vs~E~~~~l~   94 (255)
T 3qqz_A           28 NISSLTWS--AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETI--EYIG--------DNQFVISDERDYAIY   94 (255)
T ss_dssp             CEEEEEEE--TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEE--EECS--------TTEEEEEETTTTEEE
T ss_pred             CcceeEEe--CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHe--EEeC--------CCEEEEEECCCCcEE
Confidence            57889999  5555 44456778999999988 8888888643  455666  5566        556766665667788


Q ss_pred             eeeccceeh---hhh-------cCCCcceEEEEEeccccEEEEEeCCceEEEEecc
Q psy10942         81 YYETSAVKE---LYQ-------HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN  126 (537)
Q Consensus        81 ~wd~~~~~~---~~~-------~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~  126 (537)
                      ++++.....   +..       .........++|+|+++.|.++.......+|.++
T Consensus        95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A           95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            887654321   111       1223467999999999887777765556666665

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.57  E-value=0.047  Score=55.90  Aligned_cols=172  Identities=6%  Similarity=-0.089  Sum_probs=94.4

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCc---eeeEEEE---------
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGL---KLLNVLR---------  360 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~---~~~~~~~---------  360 (537)
                      ...|+..++.......      +......+..|+|++....|+.. ...+.|+.+++....   .....+.         
T Consensus       403 ~~~Ir~i~l~~~~~~~------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL  476 (791)
T 3m0c_C          403 RHEVRKMTLDRSEYTS------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL  476 (791)
T ss_dssp             BSSEEEECTTSCCCEE------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred             ccceeEeeccCCccee------eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence            3567777776554211      12234567899999865555544 456778888887321   1122222         


Q ss_pred             -ecCC-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942        361 -GHKK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI  436 (537)
Q Consensus       361 -~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i  436 (537)
                       .... +.++++-...+.|.+.++........+.....                 ....|+++|.+.+|+....  .+.|
T Consensus       477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-----------------~P~gIaVDp~~g~LYwtD~g~~~~I  539 (791)
T 3m0c_C          477 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI  539 (791)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----------------CEEEEEEETTTTEEEEEECSSSCEE
T ss_pred             eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-----------------CcceEEEecCCCCEEEecCCCCCeE
Confidence             1111 23333333444555555443222111111111                 4677888887666666653  2678


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC  488 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~  488 (537)
                      ...++........+.......+.|++++.+..|+.+. ..+.|...++.....
T Consensus       540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~  592 (791)
T 3m0c_C          540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR  592 (791)
T ss_dssp             EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence            8888865444333333345688999998777776664 456799999854433

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.50  E-value=0.059  Score=49.71  Aligned_cols=237  Identities=11%  Similarity=0.082  Sum_probs=139.5

Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                      .+|..+.+|.-. ..++.  +++++.........+..++.-+.+-+.   +.++.. .+..|+-|++.+...+.+.+.+.
T Consensus        73 MnP~~~iiALra-g~~lQ--iFnle~K~klks~~~~e~VvfWkWis~---~~l~lV-T~taVyHWsi~~~s~P~kvFdR~  145 (494)
T 1bpo_A           73 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISL---NTVALV-TDNAVYHWSMEGESQPVKMFDRH  145 (494)
T ss_dssp             ECSSSSCEEEEE-TTEEE--EEETTTTEEEEEEECSSCCCEEEEEET---TEEEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred             eCCCCcEEEEec-CCeEE--EEchHHhhhhcceecCCCceEEEecCC---CeEEEE-cCCeeEEecccCCCCchhheecc
Confidence            466666666544 57788  999988433333333333333333333   233333 25689999998755544443433


Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEeC-------CCcEEEEEccCCceeeEEEEecCC-------------CCEEEEEcC--
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGSL-------DKTVKVWSTTGGLKLLNVLRGHKK-------------GTQIVSTGA--  373 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~-------------~~~l~~~~~--  373 (537)
                      -.-....|..-..+++.++++..+-       .|.+.+|..+  .+.-+.+.+|..             ...++-+..  
T Consensus       146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~  223 (494)
T 1bpo_A          146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  223 (494)
T ss_dssp             GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred             hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--ccccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence            3333567888888999998775432       3678888887  333333444321             123333333  


Q ss_pred             -CCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        374 -DGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       374 -d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                       .+++++.++... ..-   .........+.+.|+...   .-..++..|+....+..-..-|.|++||+.++.++..-+
T Consensus       224 ~g~kLhi~Ei~~~~~~~---~~f~kk~vdv~fppe~~~---DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr  297 (494)
T 1bpo_A          224 AGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR  297 (494)
T ss_dssp             TCCEEEEEECSCCCTTC---CCCCCEEEECCCCTTSTT---CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCcEEEEEEcCCCccCC---CCccceeeeeeCCccccc---CceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence             378888887532 100   111112333344443211   035668888888888888999999999999999998877


Q ss_pred             cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942        452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST  487 (537)
Q Consensus       452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~  487 (537)
                      -....|...+-.....=++.....|.|.--.++...
T Consensus       298 Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~  333 (494)
T 1bpo_A          298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN  333 (494)
T ss_dssp             CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred             ccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence            666777665555554555555567766655555443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.50  E-value=0.0034  Score=59.66  Aligned_cols=107  Identities=8%  Similarity=0.014  Sum_probs=63.7

Q ss_pred             eeeEEEEcCCCCEEEEEeC-CC----cEEEEECCCceee--eEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10942        414 GVWFVNFSPLDRILISSSG-DA----TIKLWCLTDYVCL--KSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~-dg----~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      ....++|++++++|+++.. ++    .+.+++. .+...  ..+.. ......++++| ++.++++-..++.|+.++...
T Consensus       180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~  257 (430)
T 3tc9_A          180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT  257 (430)
T ss_dssp             CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred             CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence            5678899999986666554 22    2333443 22221  22322 23457788999 677666666778999999987


Q ss_pred             CeeEEEecCCc-cceeccCCCCCCccccccceeeecCCCEEEEEeC-CCCEEe
Q psy10942        486 STCVSTFDKHA-LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-SPQVVV  536 (537)
Q Consensus       486 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~v  536 (537)
                      +.......... ...           ..+   +|+|+|++|+.+.. .+.|..
T Consensus       258 ~~~~~~~~~~~~~~P-----------~gi---a~~pdG~~lyv~d~~~~~I~~  296 (430)
T 3tc9_A          258 QETTPLFTIQDSGWE-----------FHI---QFHPSGNYAYIVVVNQHYILR  296 (430)
T ss_dssp             TEEEEEEECSSSSCC-----------EEE---EECTTSSEEEEEETTTTEEEE
T ss_pred             CcEEEEEEcCCCCcc-----------eeE---EEcCCCCEEEEEECCCCEEEE
Confidence            65422221111 122           667   99999996666543 444543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.49  E-value=0.061  Score=49.40  Aligned_cols=184  Identities=10%  Similarity=-0.095  Sum_probs=98.4

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceee---------
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLL---------  356 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~---------  356 (537)
                      ++.+-...+.|..+++.+.....     ...........+++.+.+..| ++-...+.|.+.++.......         
T Consensus        87 ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P  161 (349)
T 3v64_C           87 VFWSDVTLDRILRANLNGSNVEE-----VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP  161 (349)
T ss_dssp             EEEEETTTTEEEEEETTSCSCEE-----EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCE
T ss_pred             EEEEeccCCceEEEecCCCCceE-----EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCc
Confidence            44455566778888877654211     111122345788999855555 444556789999887322111         


Q ss_pred             EEEEecCC-CCEEEEEcCC-CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CC
Q psy10942        357 NVLRGHKK-GTQIVSTGAD-GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GD  433 (537)
Q Consensus       357 ~~~~~~~~-~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d  433 (537)
                      ..+..++. +..+++-... +.|..+++.............                 .....++++|++..|..+. ..
T Consensus       162 ~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-----------------~~PnGla~d~~~~~lY~aD~~~  224 (349)
T 3v64_C          162 RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-----------------FWPNGLTIDYAGRRMYWVDAKH  224 (349)
T ss_dssp             EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC-----------------SCEEEEEEETTTTEEEEEETTT
T ss_pred             ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-----------------CCcceEEEeCCCCEEEEEECCC
Confidence            11222222 2222222222 444444443221111111000                 1467899998777666665 45


Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      +.|..+|+........+.........+++. .+.++++-...+.|..++..+|+....+.
T Consensus       225 ~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          225 HVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             TEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence            789999987533333333334456778883 44555555567888888866776555543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.45  E-value=0.028  Score=50.58  Aligned_cols=177  Identities=12%  Similarity=0.158  Sum_probs=102.8

Q ss_pred             CCEEEEEeCCCcEEEEEccCCceeeEEEEecC------------CCC---E-EEEEcC--CCcEEEEECC--CCeeeeee
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK------------KGT---Q-IVSTGA--DGLLKLWSIK--TSTCVSTF  391 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~---~-l~~~~~--d~~i~i~d~~--~~~~~~~~  391 (537)
                      ..+++.....+-+.+||+.  ++.+..+....            .+.   + +++...  +++|.+|++.  +++ +..+
T Consensus        40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i  116 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSLD--GKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM  116 (355)
T ss_dssp             GCEEEEEETTTEEEEEETT--SCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred             ccEEEEEcCCCCEEEEcCC--CcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence            3456666667789999995  44444443211            111   2 233333  5789999773  332 3333


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CceeeeEeecCCcceEEE
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNF--SPL-DR-ILISSSGDATIKLWCLT-------DYVCLKSLEGHDASVLRC  460 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~--s~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~  460 (537)
                      .....++     . ...    ..+..+|+  +|. ++ ++++...+|.+..|++.       +.+.++++.. .+.+-.|
T Consensus       117 ~~~~~pv-----~-t~~----~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~Egc  185 (355)
T 3amr_A          117 TDPDHPI-----A-TAI----NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGM  185 (355)
T ss_dssp             SCTTSCE-----E-CCC----SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEE
T ss_pred             cccccCc-----C-CCC----CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceE
Confidence            2210011     0 000    04555666  674 43 67778888999999882       3466777774 4568899


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECC-----CCeeEEEec-CCc-cceeccCCCCCCccccccceee--ecCCC-EEEEEe-
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIK-----TSTCVSTFD-KHA-LKIRNSDSENDHKGFGLPRQLC--SRNSD-CEYRGG-  529 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~-----~~~~~~~~~-~~~-~~i~~~~~~~~~~~~~~~~~~~--s~~~~-~l~s~~-  529 (537)
                      ...+....|+.+-++.-|..++.+     +++.+..+. ++- ..+           ..|   ++  .++++ +|++++ 
T Consensus       186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDv-----------EGL---ai~~~~~g~gyLivSsQ  251 (355)
T 3amr_A          186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDI-----------EGL---TIYYAADGKGYLMASSQ  251 (355)
T ss_dssp             EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCE-----------EEE---EEEECGGGCEEEEEEEG
T ss_pred             EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCc-----------ceE---EEEecCCCCEEEEEEcC
Confidence            999988999999998777667754     355665542 211 134           455   55  56666 666665 


Q ss_pred             CCCCEEe
Q psy10942        530 WSPQVVV  536 (537)
Q Consensus       530 ~dg~i~v  536 (537)
                      .+.+..|
T Consensus       252 G~~s~~V  258 (355)
T 3amr_A          252 GNSSYAI  258 (355)
T ss_dssp             GGTEEEE
T ss_pred             CCCEEEE
Confidence            3444443

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.44  E-value=0.073  Score=49.13  Aligned_cols=119  Identities=12%  Similarity=0.172  Sum_probs=76.2

Q ss_pred             cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942         23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI  102 (537)
Q Consensus        23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~  102 (537)
                      +++..|.|-|+.++..+.+.|    +.+=+.+..|        ..+.++.=. ...|.++|+++.+.+.....++.|.--
T Consensus        45 ~~~~~vvIiDl~~~~~~~rrp----i~AdsAIMnP--------~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfW  111 (494)
T 1bpo_A           45 GEQAQVVIIDMNDPSNPIRRP----ISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW  111 (494)
T ss_dssp             TTCCEEEEEETTSTTSCEEEE----CCCSEEEECS--------SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred             CCCCeEEEEECCCCCcceecc----cccceeeeCC--------CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEE
Confidence            344578888988877664433    3332335567        334444433 678999999999999998888888888


Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh----hhhhhhcccCCCccEEE
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD----EILDIALLGEEDSHIVV  167 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~  167 (537)
                      .|-.+. .|+..+. ..|+-|++.+.          ..+.+.+..|..    .|..-.-+ ++.+.+++
T Consensus       112 kWis~~-~l~lVT~-taVyHWsi~~~----------s~P~kvFdR~~~L~~~QIInY~~d-~~~kW~~l  167 (494)
T 1bpo_A          112 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLL  167 (494)
T ss_dssp             EEEETT-EEEEECS-SEEEEEESSSS----------CCCEEEEECCGGGTTCEEEEEEEC-TTSSEEEE
T ss_pred             EecCCC-eEEEEcC-CeeEEecccCC----------CCchhheecchhcccceEEEEEEC-CCCCeEEE
Confidence            885544 3444444 67999999763          355666666644    23333444 45555543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.43  E-value=0.0017  Score=66.76  Aligned_cols=112  Identities=7%  Similarity=0.014  Sum_probs=70.2

Q ss_pred             eEEEEec-CCCCEEEEEcC-C----CcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE
Q psy10942        356 LNVLRGH-KKGTQIVSTGA-D----GLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI  428 (537)
Q Consensus       356 ~~~~~~~-~~~~~l~~~~~-d----~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  428 (537)
                      +...... ++|+.++.... +    .+|+++|+.++ +.+..      .+.             .....++|+||++.|+
T Consensus       176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------~~~-------------~~~~~~~WspDg~~l~  236 (751)
T 2xe4_A          176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------KVS-------------GTNGEIVWGPDHTSLF  236 (751)
T ss_dssp             EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC------CEE-------------EECSCCEECSSTTEEE
T ss_pred             EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc------ccc-------------CceeeEEEecCCCEEE
Confidence            3445566 77776664332 2    35999999988 53210      010             0234577999998887


Q ss_pred             EEeCC-----CcEEEEECCCcee--eeEee-cCCcceEEEEEecCCCEEEEEeC---CCcEEEEECCCC
Q psy10942        429 SSSGD-----ATIKLWCLTDYVC--LKSLE-GHDASVLRCHFINKGTQIVSTGA---DGLLKLWSIKTS  486 (537)
Q Consensus       429 ~~~~d-----g~i~i~d~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~~---dg~v~vwd~~~~  486 (537)
                      ....+     ..|+.+++.+++.  ...+. ........+.|||||++|+..+.   ...|+++|+.++
T Consensus       237 y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          237 YVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             EEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            77654     2588888877542  22332 22334678899999999886653   345888898765

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.31  E-value=0.083  Score=47.14  Aligned_cols=156  Identities=8%  Similarity=0.043  Sum_probs=92.6

Q ss_pred             eEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc-e---------------eeEEEEe---cCCCCEEEEEc----------
Q psy10942        323 INCVTVSPNDKLLASGS-LDKTVKVWSTTGGL-K---------------LLNVLRG---HKKGTQIVSTG----------  372 (537)
Q Consensus       323 v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~-~---------------~~~~~~~---~~~~~~l~~~~----------  372 (537)
                      -.+++|++....|+.++ ..+.|..|+..... .               ...-+..   .+.+.++++..          
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~   94 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ   94 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence            35678887655666655 68999999886221 1               1122333   34445555432          


Q ss_pred             ---CCCcEEEEECC---CCeeeeeeccC--CcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-CcEEEEECCC
Q psy10942        373 ---ADGLLKLWSIK---TSTCVSTFDKH--ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-ATIKLWCLTD  443 (537)
Q Consensus       373 ---~d~~i~i~d~~---~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~i~d~~~  443 (537)
                         .+..+..||+.   +++.+....-.  ...+.    ...+..  .+....++..++|+..++++.. +.|..++...
T Consensus        95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~----~~~g~~--~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG  168 (334)
T 2p9w_A           95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE----KKAGKR--PFGVVQSAQDRDGNSYVAFALGMPAIARVSADG  168 (334)
T ss_dssp             CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH----HHHSSC--CEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred             ccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc----cccccc--ccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence               15667888887   66655433211  00000    000000  0157788888888888888777 7777776543


Q ss_pred             ceeeeEee------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        444 YVCLKSLE------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       444 ~~~~~~~~------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      . .+..+.      ......+.|+++|+++.|++....|.+..+|+.+
T Consensus       169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          169 K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            2 222221      1112367999999999999887799999999874

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.31  E-value=0.11  Score=49.67  Aligned_cols=199  Identities=8%  Similarity=-0.005  Sum_probs=100.8

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE-------cCCCCEEEEEeCCC-------cEEEEEccCC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV-------SPNDKLLASGSLDK-------TVKVWSTTGG  352 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~d~-------~i~i~d~~~~  352 (537)
                      ++++....+.|++.|++++......  ..-.........++|       +++++.|+++...+       .|.+++....
T Consensus       154 Lyv~~~~~~~i~~ID~~~~~v~~l~--~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~  231 (496)
T 3kya_A          154 LYICYDGHKAIQLIDLKNRMLSSPL--NINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD  231 (496)
T ss_dssp             EEEEEETEEEEEEEETTTTEEEEEE--CCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred             EEEEECCCCeEEEEECCCCEEEEEE--ccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence            3444444567888898876543211  111112335899999       99999777766554       2666654421


Q ss_pred             ce--------eeEEE------EecC-CCCEEEEEcCCCcEEEEECC-------CCeeeeee-ccCCcceEEEEEecCCCc
Q psy10942        353 LK--------LLNVL------RGHK-KGTQIVSTGADGLLKLWSIK-------TSTCVSTF-DKHALKIWTLAITKDENQ  409 (537)
Q Consensus       353 ~~--------~~~~~------~~~~-~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~-~~~~~~i~~~~~~~~~~~  409 (537)
                      +.        .+..+      ..++ ++.++++-..++.|..+|+.       ++..-... .........+...+++. 
T Consensus       232 G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~-  310 (496)
T 3kya_A          232 GTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS-  310 (496)
T ss_dssp             SCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS-
T ss_pred             CceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC-
Confidence            11        12111      1233 24445555566667777765       33320000 00000001111112111 


Q ss_pred             eEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECC--Ccee--eeEeecC---C------------cceE-EEEEe-----
Q psy10942        410 IITGGVWFVNFSPLDRILISSS-GDATIKLWCLT--DYVC--LKSLEGH---D------------ASVL-RCHFI-----  463 (537)
Q Consensus       410 ~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~--~~~~--~~~~~~~---~------------~~v~-~~~~s-----  463 (537)
                          ....++|+|+|++|..+. ....|+.++..  .+..  ...+.+.   .            .... .++..     
T Consensus       311 ----~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~  386 (496)
T 3kya_A          311 ----WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT  386 (496)
T ss_dssp             ----CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred             ----CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence                457899999999655554 56788886543  3322  1222221   0            1234 34444     


Q ss_pred             --cCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        464 --NKGTQIVSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       464 --~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                        +++.++++=...++|+.++ .+|. +.++.+
T Consensus       387 ~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG  417 (496)
T 3kya_A          387 GEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAG  417 (496)
T ss_dssp             SSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEE
T ss_pred             ccCCCeEEEEECCCCEEEEEe-CCCC-EEEEec
Confidence              4566666666778899998 4664 445543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.30  E-value=0.089  Score=47.48  Aligned_cols=102  Identities=7%  Similarity=-0.164  Sum_probs=64.0

Q ss_pred             eeeEEEEcCCCCEEE-EEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC--CcEEEEECCCCeeEE
Q psy10942        414 GVWFVNFSPLDRILI-SSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD--GLLKLWSIKTSTCVS  490 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~v~vwd~~~~~~~~  490 (537)
                      ....+++++.+..|. +-..++.|.++++........+.........++++|.+..|+.+...  +.|...+++ |....
T Consensus        78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~  156 (316)
T 1ijq_A           78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIY  156 (316)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEE
T ss_pred             CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeE
Confidence            456788887555454 44567899999987543333333334567899999976666655543  678888874 44333


Q ss_pred             Eec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        491 TFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       491 ~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      .+. ..-...           ..+   +++|+++.|+.+..
T Consensus       157 ~~~~~~~~~P-----------~gl---a~d~~~~~lY~~D~  183 (316)
T 1ijq_A          157 SLVTENIQWP-----------NGI---TLDLLSGRLYWVDS  183 (316)
T ss_dssp             EEECSSCSCE-----------EEE---EEETTTTEEEEEET
T ss_pred             EEEECCCCCc-----------eEE---EEeccCCEEEEEEC
Confidence            332 111222           667   99998888776654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.29  E-value=0.016  Score=51.62  Aligned_cols=158  Identities=14%  Similarity=0.051  Sum_probs=96.4

Q ss_pred             eEEEEecCC-CCEEEEEcCCCcEEEEECCCCeeeee-eccCC--cceEEEEEecCCCceEEeeeeEEEE---cCCCCEEE
Q psy10942        356 LNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCVST-FDKHA--LKIWTLAITKDENQIITGGVWFVNF---SPLDRILI  428 (537)
Q Consensus       356 ~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~--~~i~~~~~~~~~~~~~~~~i~~~~~---s~~~~~l~  428 (537)
                      ......+.. +.++++.-..++|..||...+..... +..-.  .         ++..    .+..+.+   .|++++++
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g---------~~~~----~~sGl~~~~~D~~grL~v   81 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNG---------DGEQ----QMSGLSLLTHDNSKRLFA   81 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSS---------CCSE----EEEEEEESSSSSCCEEEE
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccC---------CCcc----eeeEEEEeccCCCCcEEE
Confidence            334455554 44445555789999999875533222 22100  0         0000    3467888   68877777


Q ss_pred             EEe-------------CCCcEEEEECC---CceeeeEee--cC-----------CcceEEEEEecCCCEEEEEeCC-CcE
Q psy10942        429 SSS-------------GDATIKLWCLT---DYVCLKSLE--GH-----------DASVLRCHFINKGTQIVSTGAD-GLL  478 (537)
Q Consensus       429 ~~~-------------~dg~i~i~d~~---~~~~~~~~~--~~-----------~~~v~~~~~s~~~~~l~s~~~d-g~v  478 (537)
                      +..             .+..|..||+.   +++.+....  ..           ......++..++|+..++++.- +.|
T Consensus        82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I  161 (334)
T 2p9w_A           82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI  161 (334)
T ss_dssp             EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred             EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence            544             26779999999   777765544  11           1247899999999999998888 887


Q ss_pred             EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      ...+.. |+.+..+.......     ......+.+   +++|||+.|++...+|.|.
T Consensus       162 ~rV~pd-G~~~~~~~~~~~~~-----~~~~G~nGI---v~~pdg~~Liv~~~~g~L~  209 (334)
T 2p9w_A          162 ARVSAD-GKTVSTFAWESGNG-----GQRPGYSGI---TFDPHSNKLIAFGGPRALT  209 (334)
T ss_dssp             EEECTT-SCCEEEEEECCCCS-----SSCCSCSEE---EEETTTTEEEEESSSSSEE
T ss_pred             EEEeCC-CCEEeeeeecCCCc-----ccccCcceE---EEeCCCCEEEEEcCCCeEE
Confidence            777764 44333332111110     001112566   9999999999887677764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.16  E-value=0.13  Score=46.40  Aligned_cols=183  Identities=9%  Similarity=-0.080  Sum_probs=97.5

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEE------
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVL------  359 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~------  359 (537)
                      ++.+-...+.|..++..+.......    ..........+++.+.+..| ++-...+.|.++++.... ....+      
T Consensus        49 lyw~D~~~~~I~r~~~~g~~~~~~~----~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~  123 (318)
T 3sov_A           49 IYWSDVSEEAIKRTEFNKTESVQNV----VVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQ  123 (318)
T ss_dssp             EEEEETTTTEEEEEETTSSSCCCEE----EEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSS
T ss_pred             EEEEECCCCcEEEEEccCCCceEEE----EcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCC
Confidence            4445555678888887765321111    11112345688998755444 444556789999987322 11111      


Q ss_pred             ----EecCCCCEEEEEc--CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942        360 ----RGHKKGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G  432 (537)
Q Consensus       360 ----~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~  432 (537)
                          ..++.+..++.+.  ..+.|...++............-                 .....++++|++..|..+. .
T Consensus       124 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l-----------------~~Pnglavd~~~~~lY~aD~~  186 (318)
T 3sov_A          124 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-----------------YWPNGLTLDYEEQKLYWADAK  186 (318)
T ss_dssp             EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETT
T ss_pred             ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC-----------------CCccEEEEeccCCEEEEEECC
Confidence                1122222222222  13444444443211111110000                 1457899999777666665 4


Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      .+.|..+|+........+.+.......+++..+ .++.+-...+.|..++..+|+....+
T Consensus       187 ~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~~~~~i  245 (318)
T 3sov_A          187 LNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI  245 (318)
T ss_dssp             TTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             CCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCCceEEE
Confidence            578999998643322222323445677777643 45555556788999998777655544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.14  E-value=0.0048  Score=62.63  Aligned_cols=170  Identities=6%  Similarity=-0.067  Sum_probs=90.4

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCC---ceeeEE----------E
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGG---LKLLNV----------L  359 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~---~~~~~~----------~  359 (537)
                      .+.|+..++.+.....     .. .....+..++|++.+..|+.+. ..+.|+.+++...   ......          +
T Consensus       385 ~~~I~~id~~~~~~~~-----~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gl  458 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTS-----LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL  458 (699)
T ss_dssp             TTC-CEECTTSCCEEC-----CS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCE
T ss_pred             ccceEEEeCCCCccee-----ee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceE
Confidence            3567777877654321     11 1223456889998777666654 4578999988730   111111          1


Q ss_pred             Eec-CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942        360 RGH-KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI  436 (537)
Q Consensus       360 ~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i  436 (537)
                      ... ..+.++++-...+.|.++++........+.....                 ....++++|.+.+|+....  .+.|
T Consensus       459 avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~-----------------~P~giavDp~~g~ly~td~~~~~~I  521 (699)
T 1n7d_A          459 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI  521 (699)
T ss_dssp             ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC-----------------CCCCEECCSSSSCCEECCCSSSCCE
T ss_pred             EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCC-----------------CcceEEEccCCCcEEEcccCCCCeE
Confidence            111 1233334444456666666654432222211111                 3456778876555554432  2678


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecCCCEEE-EEeCCCcEEEEECCCC
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGADGLLKLWSIKTS  486 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~~  486 (537)
                      ..+++........+.......+.|+|+|++..|+ +-+..+.|.++++...
T Consensus       522 ~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~  572 (699)
T 1n7d_A          522 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  572 (699)
T ss_dssp             EBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred             EEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence            8777654222111222233467899999765555 4445678999998643

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.06  E-value=0.36  Score=49.67  Aligned_cols=394  Identities=10%  Similarity=0.061  Sum_probs=185.7

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      |.++...  .++ .|..+..+| +..+|..+.+...... ....+..+   ...        ++. +..++.+ .|..+|
T Consensus        65 i~~i~~d--~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i---~~~--------~g~-lWigt~~-Gl~~~~  127 (758)
T 3ott_A           65 IYCGVII--DNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTM---ALQ--------GDT-LWLGALN-GLYTYQ  127 (758)
T ss_dssp             EEEEEEE--TTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEE---EEE--------TTE-EEEEETT-EEEEEE
T ss_pred             EEEEEEc--CCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEE---Eec--------CCc-EEEEcCC-cceeEe
Confidence            5666555  454 455555667 7889988765432111 01112211   122        333 4444445 478888


Q ss_pred             ccceehhhh-----cCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cc----hhhh
Q psy10942         84 TSAVKELYQ-----HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GF----SDEI  152 (537)
Q Consensus        84 ~~~~~~~~~-----~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~----~~~v  152 (537)
                      ..+++....     -.....|.++....+|.+.+ ++.+| |..++..+.           ... .+.  ..    ...|
T Consensus       128 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~-----------~~~-~~~~~~~~~~~~~~i  193 (758)
T 3ott_A          128 LQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNG-----------KFE-GIPLPVHSSQSNLFV  193 (758)
T ss_dssp             TTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTT-----------EEE-EECCCCCTTCSSCCE
T ss_pred             CCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCC-----------ceE-EecCCCcccccccee
Confidence            766543211     11224688888888876554 55554 777887652           211 111  10    1125


Q ss_pred             hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942        153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL  231 (537)
Q Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~  231 (537)
                      .++... .+++.|.+++..+     +                 ..+|.       .+.+.. +.    .-.  ...|.++
T Consensus       194 ~~i~~d-~~~~~lWigt~~G-----l-----------------~~~~~-------~~~~~~~~~----~l~--~~~i~~i  237 (758)
T 3ott_A          194 NSLLED-TTRQCVWIGTEGY-----L-----------------FQYFP-------STGQIKQTE----AFH--NNSIKSL  237 (758)
T ss_dssp             EEEEEE-TTTTEEEEEEEEE-----E-----------------EEEET-------TTTEEEEEE----EEE--EEEEEEE
T ss_pred             EEEEEE-CCCCEEEEEECCC-----C-----------------eEEcC-------CCCeEEecc----CCC--CCeEEEE
Confidence            555544 3445567777533     4                 34444       333222 11    012  3458888


Q ss_pred             eccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee------eeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942        232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG------AFYTGGTVELLASGSLDKTVKVWSTTGG  305 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~l~~~~~d~~i~i~~~~~~  305 (537)
                         ....+|.+.+. +.+| +.  +++..................+      ....+.. ..+-.|+..| +.++.....
T Consensus       238 ---~~d~~g~lWig-T~~G-l~--~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~-g~lWiGT~~G-l~~~~~~~~  308 (758)
T 3ott_A          238 ---ALDGNGDLLAG-TDNG-LY--VYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE-HNIWLGTDYG-ISLSRYNSA  308 (758)
T ss_dssp             ---EECTTCCEEEE-ETTE-EE--EECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT-CCEEEEESSS-EEEECCCC-
T ss_pred             ---EEcCCCCEEEE-eCCc-ee--EEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC-CCEEEEeCCc-ccccccCCc
Confidence               76777765554 3444 55  5665442211000000000000      0001100 2244444445 433332211


Q ss_pred             ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC------------------ceeeEEEEecCCCCE
Q psy10942        306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG------------------LKLLNVLRGHKKGTQ  367 (537)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~------------------~~~~~~~~~~~~~~~  367 (537)
                      -................|.++.-.++|.+.+ |+.+| +..++....                  ...+..+....++..
T Consensus       309 ~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l  386 (758)
T 3ott_A          309 LQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQL  386 (758)
T ss_dssp             CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCE
T ss_pred             eeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCE
Confidence            1100000000011234688888888887555 44555 555543311                  011333444444544


Q ss_pred             EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---
Q psy10942        368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---  444 (537)
Q Consensus       368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---  444 (537)
                      .+ |+ ++-+..+|..+++.........           ...+....|.++...+++++. .|+..+-+..+|..+.   
T Consensus       387 Wi-gt-~~GL~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~  452 (758)
T 3ott_A          387 WI-AT-DGSINRYDYATRQFIHYNIVDN-----------TGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQS  452 (758)
T ss_dssp             EE-EE-TTEEEEEETTTTEEEEEEEECC-----------C--CBSSSEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHC
T ss_pred             EE-Ee-CCcHhhcCcCCCcEEEeecCCC-----------cCCCCCceEEEEEEcCCCCEE-EEECCCceEEEcccccccc
Confidence            44 34 3468888887765332110000           000001156777777777644 4666667888885431   


Q ss_pred             --eee---eEee---c-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        445 --VCL---KSLE---G-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       445 --~~~---~~~~---~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                        ...   ..+.   + ....|.++...++|.+.+.++..+-+..+|..+++...
T Consensus       453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~  507 (758)
T 3ott_A          453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTK  507 (758)
T ss_dssp             CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEE
T ss_pred             CCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEE
Confidence              111   1111   1 12348889988888877644444568889988776543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.05  E-value=0.063  Score=50.93  Aligned_cols=155  Identities=10%  Similarity=-0.030  Sum_probs=81.6

Q ss_pred             CeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC---CeeeeeeccCCc
Q psy10942        322 DINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT---STCVSTFDKHAL  396 (537)
Q Consensus       322 ~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~  396 (537)
                      ....++++|+  +..|+.+...+.|+.+|+. ......... ......-++.+.+|.+.+-|...   ...+..+.....
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~-~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFV-NQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETT-TTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECC-CCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence            3568899984  4455555444889999986 333332221 11112223334444444444321   111111111110


Q ss_pred             ceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEe-ec-CCcceEEEEEecCCCEEEEE-
Q psy10942        397 KIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSL-EG-HDASVLRCHFINKGTQIVST-  472 (537)
Q Consensus       397 ~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~s~-  472 (537)
                      .........      ......++++| ++.+.++-..++.|+.+|..++.....+ .. ....-..++|+|++++|+.+ 
T Consensus       218 ~~~~~~~~~------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad  291 (433)
T 4hw6_A          218 FTERLSLCN------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY  291 (433)
T ss_dssp             TCCEEEEEE------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred             eeccccccc------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence            000000000      01456688999 6666666556788999998876652222 21 11223469999999965555 


Q ss_pred             eCCCcEEEEECC
Q psy10942        473 GADGLLKLWSIK  484 (537)
Q Consensus       473 ~~dg~v~vwd~~  484 (537)
                      ...+.|+.+++.
T Consensus       292 ~~~~~I~~~~~d  303 (433)
T 4hw6_A          292 NGKHCIYRVDYN  303 (433)
T ss_dssp             TTTTEEEEEEBC
T ss_pred             CCCCEEEEEeCC
Confidence            456789998865

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.04  E-value=0.085  Score=48.09  Aligned_cols=100  Identities=4%  Similarity=-0.107  Sum_probs=61.0

Q ss_pred             eeeEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CC
Q psy10942        414 GVWFVNFSPLDRILISSSG-----------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-AD  475 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d  475 (537)
                      ..+.+++.++|++.++...                 .|.|.-+|.  ++.. .+...-...+.++|+||++.|+.+. ..
T Consensus       166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~  242 (355)
T 3sre_A          166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLA  242 (355)
T ss_dssp             SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred             CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCC
Confidence            5788888999987776541                 244555554  3322 2222234468999999998887665 46


Q ss_pred             CcEEEEECCC-CeeE--EEecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCC
Q psy10942        476 GLLKLWSIKT-STCV--STFDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWS  531 (537)
Q Consensus       476 g~v~vwd~~~-~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~d  531 (537)
                      +.|..|++.. ++..  ..+. .....           -.+   ++.+ +|++.+++..+
T Consensus       243 ~~I~~~~~~~~g~l~~~~~~~-~~g~P-----------DGi---~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          243 HKIHVYEKHANWTLTPLRVLS-FDTLV-----------DNI---SVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             TEEEEEEECTTSCEEEEEEEE-CSSEE-----------EEE---EECTTTCCEEEEEESC
T ss_pred             CeEEEEEECCCCcEecCEEEe-CCCCC-----------ceE---EEeCCCCcEEEEecCC
Confidence            7899999863 3322  1221 11222           556   8888 58877766533

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.99  E-value=0.047  Score=50.28  Aligned_cols=115  Identities=14%  Similarity=0.055  Sum_probs=72.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCce------------eeeEeec------CCcceEEEEEec---CCCEEEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYV------------CLKSLEG------HDASVLRCHFIN---KGTQIVST  472 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~------~~~~v~~~~~s~---~~~~l~s~  472 (537)
                      .+..+..+|+|++||..+. ..|.|..+..+.            ..+.+.-      ...+|..+.|+|   .+..|++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            4566888999999988754 688898887321            1112221      246799999999   46689999


Q ss_pred             eCCCcEEEEECCCC--eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe--CCCCEE
Q psy10942        473 GADGLLKLWSIKTS--TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG--WSPQVV  535 (537)
Q Consensus       473 ~~dg~v~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~--~dg~i~  535 (537)
                      ..|+.||+||+...  ++. .+....... ..+ .......++   +|.+++-.|+..+  ..|.|.
T Consensus       146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~f-g~d-~~~~ev~S~---~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPI-VLNKPNNSF-GLD-ARVNDITDL---EFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCE-EESCCCSEE-ESC-SSCCCEEEE---EECTTSSCEEEEECTTSCEEE
T ss_pred             ecCCEEEEEEcccCCCCCc-chhcccccc-CCC-cccceEEEE---EEcCCCcEEEEEecCCCCCEE
Confidence            99999999999752  222 332111100 000 000111566   9999988887755  667664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.79  E-value=0.35  Score=45.25  Aligned_cols=187  Identities=11%  Similarity=-0.068  Sum_probs=96.2

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEEE-----
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVLR-----  360 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~-----  360 (537)
                      ++.+-...+.|+.+++......... .............+++.+.++.| ++-...+.|.+.++. +......+.     
T Consensus       126 lywsD~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l~~~~~~~  203 (400)
T 3p5b_L          126 IYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSK  203 (400)
T ss_dssp             EEEEETTTTEEEEEEC------CCC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEEEECSSCC
T ss_pred             eEEEecCCCeEEEEEcccCCCCCcc-eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEEEeCCCCC
Confidence            4444455677777777652100000 11112233457889999854444 444556788888887 332222222     


Q ss_pred             -----ecCCCCEEEEEc-C-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942        361 -----GHKKGTQIVSTG-A-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G  432 (537)
Q Consensus       361 -----~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~  432 (537)
                           .++.+..|+... . .+.|...++............-                 .....|++++++..|..+. .
T Consensus       204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l-----------------~~P~glavd~~~~~lY~aD~~  266 (400)
T 3p5b_L          204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSK  266 (400)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETT
T ss_pred             cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC-----------------CceEEEEEEeCCCEEEEEECC
Confidence                 222222222221 1 2344444443221111111100                 1567899998877777765 4


Q ss_pred             CCcEEEEECCCceeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        433 DATIKLWCLTDYVCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      .+.|..+|+...........  .......+++. .+.++++-...+.|..++..+|+.+..+.
T Consensus       267 ~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~  328 (400)
T 3p5b_L          267 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA  328 (400)
T ss_dssp             TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred             CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence            57899999865433322332  22345677774 33455566667889999977776655554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.78  E-value=0.3  Score=44.48  Aligned_cols=69  Identities=14%  Similarity=0.092  Sum_probs=46.4

Q ss_pred             eeeEEEEcCCCCEEEEEe-CCCcEEEEECCC-cee--eeEeecCCcceEEEEEec-CCCEEEEEeCC-CcEEEEEC
Q psy10942        414 GVWFVNFSPLDRILISSS-GDATIKLWCLTD-YVC--LKSLEGHDASVLRCHFIN-KGTQIVSTGAD-GLLKLWSI  483 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d-g~v~vwd~  483 (537)
                      ..+.++||||++.|..+. ..+.|..|++.. ++.  ...+. ..+..-.+++.+ +|++.+++..+ +.|..|+.
T Consensus       222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred             ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence            467899999998887775 467899999863 322  22332 345577899999 59888877544 33444443

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.74  E-value=0.18  Score=45.03  Aligned_cols=171  Identities=12%  Similarity=0.095  Sum_probs=82.9

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCce-eeEEEEecC-----
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLK-LLNVLRGHK-----  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~~~~~~~-----  363 (537)
                      ..+.+||..+.+-...   ..+......-..+.  .++++++.|+.+     ..+.+||+..... ....+..-+     
T Consensus        31 ~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~  105 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFL---PSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL  105 (301)
T ss_dssp             CCEEEEETTTTEEEEC---CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS
T ss_pred             eEEEEEcCCCCeEEeC---CCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc
Confidence            4688999887753221   11111111122222  256777777754     4688999873320 011111111     


Q ss_pred             ------CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        364 ------KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       364 ------~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                            ++..++.|+.+     ..+.+||..+.+-...           .-.|....    .-..+.  .++++++.|+.
T Consensus       106 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-----------~~~p~~r~----~~~~~~--~~~~iyv~GG~  168 (301)
T 2vpj_A          106 AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSML-----------GDMQTARE----GAGLVV--ASGVIYCLGGY  168 (301)
T ss_dssp             CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE-----------EECSSCCB----SCEEEE--ETTEEEEECCB
T ss_pred             eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEEC-----------CCCCCCcc----cceEEE--ECCEEEEECCC
Confidence                  24445555433     3466677665543221           11121111    111111  25667777765


Q ss_pred             C-----CcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeE
Q psy10942        433 D-----ATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTSTCV  489 (537)
Q Consensus       433 d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~~~  489 (537)
                      +     ..+.+||..+.+-...  +......-. ++ .-++++++.|+.+     ..+.+||+.+.+-.
T Consensus       169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  235 (301)
T 2vpj_A          169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAG-VA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT  235 (301)
T ss_dssp             CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCE-EE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred             CCCcccceEEEEeCCCCcEEeCCCCCcccccce-EE-EECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence            4     4688999877543222  211111112 22 2256677777654     46899999876543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.71  E-value=0.035  Score=56.33  Aligned_cols=80  Identities=11%  Similarity=-0.120  Sum_probs=50.6

Q ss_pred             eeeEEEEcCCCCEEEEE-eCCCcEEEEECCCceeeeEee--cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942        414 GVWFVNFSPLDRILISS-SGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS  490 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~  490 (537)
                      ....|+++|++..|+.+ ...+.|..+++........+.  ........|++..+ .++++....+.|..++..+|+.+.
T Consensus       541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~  619 (699)
T 1n7d_A          541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN  619 (699)
T ss_dssp             SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred             CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence            45678999886555554 456789999986533222222  11223455666554 455555667899999988888877


Q ss_pred             EecC
Q psy10942        491 TFDK  494 (537)
Q Consensus       491 ~~~~  494 (537)
                      .+..
T Consensus       620 ~i~~  623 (699)
T 1n7d_A          620 LLAE  623 (699)
T ss_dssp             CCCT
T ss_pred             Eeec
Confidence            7643

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.66  E-value=0.26  Score=44.08  Aligned_cols=175  Identities=11%  Similarity=0.092  Sum_probs=86.7

Q ss_pred             EEEEEeC--CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCCceeeEEEE
Q psy10942        287 LLASGSL--DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGGLKLLNVLR  360 (537)
Q Consensus       287 ~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~  360 (537)
                      +++.|+.  ...+.+||..+.+-...   ..+......-..+.+  ++++++.|+.+    ..+.+||+. ...-.. +.
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~-~~   86 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDI---RCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVV-KDSWYS-KL   86 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEEC---CCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETT-TTEEEE-EE
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecC---CCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCC-CCeEEE-CC
Confidence            4555554  36788999988754221   111111112222222  66777777754    568888887 332221 11


Q ss_pred             ecC-----------CCCEEEEEcCC------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942        361 GHK-----------KGTQIVSTGAD------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL  423 (537)
Q Consensus       361 ~~~-----------~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~  423 (537)
                      ..+           ++..++.|+.+      ..+.+||..+.+-...-.           .|....    .-..+.  -+
T Consensus        87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~~~~~~--~~  149 (306)
T 3ii7_A           87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS-----------MLTQRC----SHGMVE--AN  149 (306)
T ss_dssp             CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC-----------CSSCCB----SCEEEE--ET
T ss_pred             CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC-----------CcCCcc----eeEEEE--EC
Confidence            111           24455555544      457777877664322211           111110    111111  25


Q ss_pred             CCEEEEEeC---------CCcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        424 DRILISSSG---------DATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       424 ~~~l~~~~~---------dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                      +++++.|+.         -..+.+||..+.+-...  +...... .+++.. ++++++.|+.+     ..+.+||+.+.+
T Consensus       150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~  227 (306)
T 3ii7_A          150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE  227 (306)
T ss_dssp             TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred             CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence            566666653         34588999887543222  2111111 122222 56677776653     458899987764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.54  E-value=0.39  Score=43.14  Aligned_cols=175  Identities=8%  Similarity=0.064  Sum_probs=86.4

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-----C------CcEEEEEccCCcee
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-----D------KTVKVWSTTGGLKL  355 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d------~~i~i~d~~~~~~~  355 (537)
                      +++.|+  ..+..||..+.+-..    ..+..............++++++.|+.     .      ..+..||+. ..+-
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~----~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W   79 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC----ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEW   79 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE----EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEE
T ss_pred             EEEEcC--CceEEECCCCCeEec----CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeE
Confidence            344555  679999999887432    111111112223333457788888873     1      126777876 3221


Q ss_pred             eEEEEecC-----------CCCEEEEEcCC--------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942        356 LNVLRGHK-----------KGTQIVSTGAD--------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW  416 (537)
Q Consensus       356 ~~~~~~~~-----------~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~  416 (537)
                       ..+..-+           ++..++.|+.+        ..+.+||..+.+-...-.           .|..+     .-.
T Consensus        80 -~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r-----~~~  142 (315)
T 4asc_A           80 -LGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-----------LPYVV-----YGH  142 (315)
T ss_dssp             -EECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-----------CSSCC-----BSC
T ss_pred             -EECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-----------CCCcc-----cce
Confidence             1111111           24455555532        457778877664322111           11111     011


Q ss_pred             EEEEcCCCCEEEEEeC-C-----CcEEEEECCCceee--eEeecCCcceEEEEEecCCCEEEEEeCCC-----cEEEEEC
Q psy10942        417 FVNFSPLDRILISSSG-D-----ATIKLWCLTDYVCL--KSLEGHDASVLRCHFINKGTQIVSTGADG-----LLKLWSI  483 (537)
Q Consensus       417 ~~~~s~~~~~l~~~~~-d-----g~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~vwd~  483 (537)
                      +++ ..++++++.|+. +     ..+.+||..+.+-.  ..+......- +++ .-++++++.|+.++     .+.+||+
T Consensus       143 ~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~  219 (315)
T 4asc_A          143 TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLF-GAT-VHDGRIIVAAGVTDTGLTSSAEVYSI  219 (315)
T ss_dssp             EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEEEEECSSSEEEEEEEEET
T ss_pred             eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhce-EEE-EECCEEEEEeccCCCCccceEEEEEC
Confidence            111 134566677765 2     46899998875432  2221111111 122 22667777777654     4888998


Q ss_pred             CCCee
Q psy10942        484 KTSTC  488 (537)
Q Consensus       484 ~~~~~  488 (537)
                      .+.+-
T Consensus       220 ~~~~W  224 (315)
T 4asc_A          220 TDNKW  224 (315)
T ss_dssp             TTTEE
T ss_pred             CCCeE
Confidence            77643

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.48  E-value=0.44  Score=42.48  Aligned_cols=176  Identities=11%  Similarity=0.119  Sum_probs=84.6

Q ss_pred             EEEEEeCC----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeE
Q psy10942        287 LLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLN  357 (537)
Q Consensus       287 ~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~  357 (537)
                      +++.|+.+    ..+..||..+..-...   ..+......-..+.+  ++++++.|+.+     ..+.+||+. ..+-. 
T Consensus        18 i~v~GG~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~-   90 (302)
T 2xn4_A           18 MVVVGGQAPKAIRSVECYDFKEERWHQV---AELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPV-KDQWT-   90 (302)
T ss_dssp             EEEECCBSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETT-TTEEE-
T ss_pred             EEEECCCCCCCCCcEEEEcCcCCcEeEc---ccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCC-CCcee-
Confidence            45555533    4688899887653221   111111111122222  66777777654     357888877 32221 


Q ss_pred             EEEecC-----------CCCEEEEEcCCC-----cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942        358 VLRGHK-----------KGTQIVSTGADG-----LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS  421 (537)
Q Consensus       358 ~~~~~~-----------~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s  421 (537)
                      .+..-+           ++..++.|+.++     .+.+||+.+.+-...-.           .|....    . .+++. 
T Consensus        91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~-~~~~~-  153 (302)
T 2xn4_A           91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP-----------MNTRRS----S-VGVGV-  153 (302)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC-----------CSSCCB----S-CEEEE-
T ss_pred             eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC-----------CCCccc----C-ceEEE-
Confidence            111111           245555565442     46667776654322211           111110    1 11111 


Q ss_pred             CCCCEEEEEeCC-------CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        422 PLDRILISSSGD-------ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       422 ~~~~~l~~~~~d-------g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                      -++++++.|+.+       ..+.+||..+.+-..  .+....... +++. -++++++.|+.+     ..+.+||+.+.+
T Consensus       154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          154 VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence            245666666532       458899988754322  222111111 2222 256777777654     368899988765


Q ss_pred             e
Q psy10942        488 C  488 (537)
Q Consensus       488 ~  488 (537)
                      -
T Consensus       232 W  232 (302)
T 2xn4_A          232 W  232 (302)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.39  E-value=1.1  Score=46.03  Aligned_cols=197  Identities=13%  Similarity=-0.001  Sum_probs=94.7

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEec-CC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGH-KK  364 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-~~  364 (537)
                      ++++-...+.|+.+++......... ...+.........|++.+.++.|+.+ ...+.|.+.++. +......+... ..
T Consensus       438 lY~sD~~~~~I~~~~l~g~~~~~~~-~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~~~~l~~  515 (791)
T 3m0c_C          438 IYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSK  515 (791)
T ss_dssp             EEEEETTTTEEEEEEC--------C-EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEEECTTCC
T ss_pred             eEEeeccceeEEEEeccCCCCCcce-eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEEEeCCCCC
Confidence            4444455567777776643110000 11112223456789999877555554 456789999987 33222222211 11


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTD  443 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~  443 (537)
                      ..-|+.-...|.|++-|......+..+.........+ +...     ......|++++.+..|+.+. ..+.|..+++..
T Consensus       516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l-v~~~-----l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL-VTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE-ECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE-EeCC-----CCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            1223332333444444432211222221111111111 0000     01567889998777776665 456899999865


Q ss_pred             ceeeeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942        444 YVCLKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       444 ~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ......+...  ......|++..+ .++++-...+.|...+..+|+.+..+
T Consensus       590 ~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG~~~~~l  639 (791)
T 3m0c_C          590 GNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL  639 (791)
T ss_dssp             CSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             CceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCCcceEEe
Confidence            4433333321  223456666433 34444445678888887777655555

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.39  E-value=0.15  Score=48.61  Aligned_cols=70  Identities=6%  Similarity=-0.025  Sum_probs=43.2

Q ss_pred             eeeEEEE-------cCCCCEEEEEeCCC-------cEEEEECCC-ceee-----eEeecCCcceEEEEEecC-CCEEEEE
Q psy10942        414 GVWFVNF-------SPLDRILISSSGDA-------TIKLWCLTD-YVCL-----KSLEGHDASVLRCHFINK-GTQIVST  472 (537)
Q Consensus       414 ~i~~~~~-------s~~~~~l~~~~~dg-------~i~i~d~~~-~~~~-----~~~~~~~~~v~~~~~s~~-~~~l~s~  472 (537)
                      ....++|       ++++++|+++...+       .|.+++... +...     ..+... .....++++|+ +.++++-
T Consensus       187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd  265 (496)
T 3kya_A          187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNS  265 (496)
T ss_dssp             BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE
T ss_pred             CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEE
Confidence            5677888       99998666666543       266665333 2221     122221 23457788995 4555556


Q ss_pred             eCCCcEEEEECC
Q psy10942        473 GADGLLKLWSIK  484 (537)
Q Consensus       473 ~~dg~v~vwd~~  484 (537)
                      ..++.|..+|+.
T Consensus       266 ~~~g~V~r~d~~  277 (496)
T 3kya_A          266 YEKGQVFRLDLV  277 (496)
T ss_dssp             TTTTEEEEECHH
T ss_pred             CCCCEEEEEecc
Confidence            677889999987

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.30  E-value=0.6  Score=42.21  Aligned_cols=104  Identities=12%  Similarity=0.089  Sum_probs=62.1

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV  489 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~  489 (537)
                      .+..+.++++++.++. +.+|.+++.+...++.-..+..    +...+.++.+.+++.+++++ .++.+ .+..+.|+.-
T Consensus       206 ~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW  282 (327)
T 2xbg_A          206 RLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTW  282 (327)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSC
T ss_pred             ccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCccc
Confidence            5677888888876654 4567777764332333222221    22358889999887766665 46766 4555556544


Q ss_pred             EEecC---CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        490 STFDK---HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       490 ~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      ..+..   ....+           ..+   .|.+++. ++.++.+|.|.
T Consensus       283 ~~~~~~~~~~~~~-----------~~v---~~~~~~~-~~~~G~~G~i~  316 (327)
T 2xbg_A          283 QQDVDVKKVPSNF-----------YKI---LFFSPDQ-GFILGQKGILL  316 (327)
T ss_dssp             EECGGGTTSSSCC-----------CEE---EEEETTE-EEEECSTTEEE
T ss_pred             EEcCccCCCCCCe-----------EEE---EEECCCc-eEEEcCCceEE
Confidence            44432   12334           666   8876555 55667788764

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.10  E-value=0.15  Score=54.52  Aligned_cols=225  Identities=11%  Similarity=0.092  Sum_probs=122.5

Q ss_pred             cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942         23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI  102 (537)
Q Consensus        23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~  102 (537)
                      +....|.|-|+.++..+.+-    ++.+=+.+..|        ..+.++.=. ...|.++|+++...+.....++.|.--
T Consensus        45 ~~~~~vvIidl~~~~~~~rr----pi~AdsAIMnP--------~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfW  111 (1630)
T 1xi4_A           45 GEQAQVVIIDMNDPSNPIRR----PISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW  111 (1630)
T ss_pred             CCCceEEEEECCCCCCcccc----cccchhhccCC--------CcceEEEec-CCeEEEeehHHhhhhcccccCCCceEE
Confidence            33447888888887765333    33333335566        445555543 678999999999999999988888888


Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc----hhhhhhhhcccCCCccEEEeeeccccCCcc
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF----SDEILDIALLGEEDSHIVVASNEYLNGGDL  178 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i  178 (537)
                      .|-.+. .|+..+. ..|.-|++.+.          ..+.+.+..|    ...|..-.-+ ++.+.+++.+-... .+.+
T Consensus       112 kWis~~-~l~lVT~-~aVyHW~~~~~----------s~P~k~fdR~~~L~~~QIinY~~d-~~~kW~~l~gi~~~-~~~v  177 (1630)
T 1xi4_A          112 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLLTGISAQ-QNRV  177 (1630)
T ss_pred             EecCCC-eeEEEcC-CeEEEeccCCC----------CccHHHHhcchhcccCeeEEeeeC-CCCCeEEEEeeccC-CCcc
Confidence            885444 3444443 56999999752          2333333333    2335555555 45555544332211 1223


Q ss_pred             cceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc--cC-CCeeeeccC---CCc
Q psy10942        179 SGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV--KE-EDLFPRQSM---EPS  251 (537)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s--~~-~~~l~~~~~---d~~  251 (537)
                      .|.+             .+++.       +....+ +.     ||  ......+   ...  +. ...++.+..   .+.
T Consensus       178 ~G~m-------------QLyS~-------er~~sQ~ie-----gh--a~~F~~~---~~~~~~~~~~l~~f~~~~~~g~k  227 (1630)
T 1xi4_A          178 VGAM-------------QLYSV-------DRKVSQPIE-----GH--AASFAQF---KMEGNAEESTLFCFAVRGQAGGK  227 (1630)
T ss_pred             ccee-------------eeeec-------ccccchhhh-----Hh--Hhhhhee---ccCCCCCCceEEEEEEecCCCce
Confidence            3333             77777       555555 66     77  4444333   221  11 223322221   256


Q ss_pred             ceeccccccCC--Ccccccccccccceeeeee----CCcc--------eEEEEEeCCCeEEEEECCCCceee
Q psy10942        252 TLEELEKRKTY--HFPLFGIFVPEAEHGAFYT----GGTV--------ELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       252 i~~~iw~~~~~--~~~~~~~~~~~~~~~~~~~----~~~v--------~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      +.  +-++...  ..+...   .....+...+    +..+        ..+..-+.-|.|.+||+.++..+.
T Consensus       228 Lh--i~Ei~~~~~~~~~f~---kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~  294 (1630)
T 1xi4_A          228 LH--IIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY  294 (1630)
T ss_pred             EE--EEecCCCccCCCCCc---cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence            77  7776542  111110   0000111111    0111        566677788999999999997643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=95.94  E-value=0.13  Score=47.38  Aligned_cols=141  Identities=7%  Similarity=0.048  Sum_probs=81.1

Q ss_pred             CcceEEEecCcceEEEEEcCccceeeeecc-----ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-----YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE   89 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~   89 (537)
                      ++..++.+- ++.||.-++......+.+..     +..+..+  +.+|        ++.+++..+.. .|.|-.+..+..
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~ql--vlSp--------sG~lLAl~g~~-~V~Vv~LP~~~~   98 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHV--ISST--------SGDLLCLFNDN-EIFVMEVPWGYS   98 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEE--EECT--------TSSEEEEECSS-EEEEEECCTTCS
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEE--EECC--------CCCEEEEecCC-eEEEEEecCccc
Confidence            333344332 35677777764444444332     2245555  6677        77888888844 588887763221


Q ss_pred             -----------------hhhcC--CCcceEEEEEecc---ccEEEEEeCCceEEEEecccccCcccccccccceeEEeec
Q psy10942         90 -----------------LYQHG--LSSPLVRIVRSSV---KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG  147 (537)
Q Consensus        90 -----------------~~~~~--~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  147 (537)
                                       +...+  ...+|..+.|+|-   +..|++-..|+.|++||+......+. ..+.......+..
T Consensus        99 ~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~  177 (452)
T 3pbp_A           99 NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDA  177 (452)
T ss_dssp             CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCS
T ss_pred             cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCc
Confidence                             01111  1357999999884   45799999999999999986321111 0000000001112


Q ss_pred             chhhhhhhhcccCCCccEEEee
Q psy10942        148 FSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus       148 ~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ....|.+++|. .++=.|.+.+
T Consensus       178 ~~~ev~S~~Fg-~~~lTLYvl~  198 (452)
T 3pbp_A          178 RVNDITDLEFS-KDGLTLYCLN  198 (452)
T ss_dssp             SCCCEEEEEEC-TTSSCEEEEE
T ss_pred             ccceEEEEEEc-CCCcEEEEEe
Confidence            22457889998 5666676655

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.87  E-value=0.97  Score=40.77  Aligned_cols=104  Identities=8%  Similarity=0.050  Sum_probs=65.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE--cC-CCCEEEEE-eCCCcEEEEEccCCceeeEEEEe
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV--SP-NDKLLASG-SLDKTVKVWSTTGGLKLLNVLRG  361 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~  361 (537)
                      ..++.++.||.|.-+|..+++........    ...++....-  .+ ++..++.. ..||.++.++... +.....+..
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~   85 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSI   85 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeecc
Confidence            47899999999999999999887655221    1111111100  01 22333333 5788888888763 322221111


Q ss_pred             ---------c-------------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942        362 ---------H-------------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH  394 (537)
Q Consensus       362 ---------~-------------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  394 (537)
                               .             ..+..+++++.+|++...|+.+|+.+..+...
T Consensus        86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~  140 (339)
T 2be1_A           86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG  140 (339)
T ss_dssp             HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred             ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence                     0             14667889999999999999999999888643

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.84  E-value=0.92  Score=40.30  Aligned_cols=176  Identities=13%  Similarity=0.121  Sum_probs=86.9

Q ss_pred             eEEEEEeCC-----CeEEEEECCCCc---eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCC
Q psy10942        286 ELLASGSLD-----KTVKVWSTTGGL---KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGG  352 (537)
Q Consensus       286 ~~l~~~~~d-----~~i~i~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~  352 (537)
                      ..++.|+.+     ..+.+||..+..   -..   ...+......-..+.+  ++++++.|+.+     ..+.+||+. .
T Consensus        64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~---~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~-~  137 (301)
T 2vpj_A           64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYS---VAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPN-I  137 (301)
T ss_dssp             EEEEECCBCSSCBCCCEEEEETTCCTTCCCEE---ECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT-T
T ss_pred             EEEEEcCCCCCccCceEEEEECCCCCCCeeEE---CCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCC-C
Confidence            455666544     468899988765   211   1111111112222222  57777777643     357888887 3


Q ss_pred             ceeeEEEEecC-----------CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942        353 LKLLNVLRGHK-----------KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW  416 (537)
Q Consensus       353 ~~~~~~~~~~~-----------~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~  416 (537)
                      .+-.. +...+           ++..++.|+.+     ..+..||+.+.+-...-.           .|....    ...
T Consensus       138 ~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~~~  201 (301)
T 2vpj_A          138 DQWSM-LGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP-----------MATKRS----GAG  201 (301)
T ss_dssp             TEEEE-EEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC-----------CSSCCB----SCE
T ss_pred             CeEEE-CCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC-----------CCcccc----cce
Confidence            32222 11111           24455555543     356777776654332211           111111    111


Q ss_pred             EEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECC
Q psy10942        417 FVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIK  484 (537)
Q Consensus       417 ~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~  484 (537)
                      .+.  -++++++.|+.+     ..+.+||+.+.+-...  +.........+  .-++++++.|+.+     ..+.+||++
T Consensus       202 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~  277 (301)
T 2vpj_A          202 VAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPI  277 (301)
T ss_dssp             EEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred             EEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCcccccEEEEcCC
Confidence            112  256677777653     4689999987543322  22111111222  2266777777755     357888987


Q ss_pred             CCe
Q psy10942        485 TST  487 (537)
Q Consensus       485 ~~~  487 (537)
                      +.+
T Consensus       278 ~~~  280 (301)
T 2vpj_A          278 IDS  280 (301)
T ss_dssp             TTE
T ss_pred             CCe
Confidence            754

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.72  E-value=0.32  Score=44.60  Aligned_cols=28  Identities=7%  Similarity=-0.070  Sum_probs=20.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWST  349 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~  349 (537)
                      .....|+|.|+|+++ ++..+|.|++++.
T Consensus        29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~   56 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYL-VTERPGRLVLISP   56 (354)
T ss_dssp             SCEEEEEEEETTEEE-EEETTTEEEEECS
T ss_pred             CCCeEEEEcCCCeEE-EEeCCCEEEEEeC
Confidence            346789999999744 4556688888763

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.71  E-value=1.2  Score=40.69  Aligned_cols=61  Identities=7%  Similarity=-0.000  Sum_probs=33.3

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC---CCEEEEEeCC------CcEEEEEcc
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN---DKLLASGSLD------KTVKVWSTT  350 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d------~~i~i~d~~  350 (537)
                      ++.+..+|.|++++  .+......-.............|+++|+   +..|+++...      +.|..++..
T Consensus        44 l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~  113 (352)
T 2ism_A           44 MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL  113 (352)
T ss_dssp             EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred             EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence            33444568888888  2321100000111222456889999998   5555554432      567777776

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.71  E-value=2.2  Score=43.76  Aligned_cols=180  Identities=9%  Similarity=-0.002  Sum_probs=94.6

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC-----c--------
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG-----L--------  353 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-----~--------  353 (537)
                      +-.|+ ++-+..|+..+++...-....... .....|.++...++++ |..|+..+-+.++|....     .        
T Consensus       386 lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~  463 (758)
T 3ott_A          386 LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNY  463 (758)
T ss_dssp             EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEE
T ss_pred             EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceeccccc
Confidence            44455 457888998776532111000000 1234688888877775 455666556888875410     1        


Q ss_pred             --------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC
Q psy10942        354 --------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR  425 (537)
Q Consensus       354 --------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~  425 (537)
                              ..+..+....++...+.++..+-+..+|..+++..........        .      ...+.++....+|.
T Consensus       464 ~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~--------~------~~~~~~i~~d~~g~  529 (758)
T 3ott_A          464 SVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELT--------G------EKSPNYLLCDEDGL  529 (758)
T ss_dssp             CGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSC--------G------GGCEEEEEECTTSC
T ss_pred             ccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcC--------C------CcccceEEECCCCC
Confidence                    1133444445566655333344577788776654332111000        0      01466777788887


Q ss_pred             EEEEEeCCCcEEEEECCCceeeeE-eec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        426 ILISSSGDATIKLWCLTDYVCLKS-LEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       426 ~l~~~~~dg~i~i~d~~~~~~~~~-~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      +.+. +. +-+..||..+.+.... ..+ ....|.++... +|. |..++..| +..+|..+.+.
T Consensus       530 lWig-t~-~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~  589 (758)
T 3ott_A          530 LWVG-FH-GGVMRINPKDESQQSISFGSFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDA  589 (758)
T ss_dssp             EEEE-ET-TEEEEECC--CCCCBCCCCC---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCCE
T ss_pred             EEEE-ec-CceEEEecCCCceEEecccCCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCcee
Confidence            7654 44 4588888765432211 111 12457777764 554 55555555 78888877653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.69  E-value=1.1  Score=39.97  Aligned_cols=176  Identities=11%  Similarity=0.110  Sum_probs=88.0

Q ss_pred             eEEEEEeCC----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCCcee
Q psy10942        286 ELLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGGLKL  355 (537)
Q Consensus       286 ~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~~~~  355 (537)
                      .+++.|+.+    ..+.+||..+.+-....   .+......-..+.+  ++++++.|+.+      ..+.+||+. ...-
T Consensus        57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~-~~~W  130 (306)
T 3ii7_A           57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKL---GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTR-TESW  130 (306)
T ss_dssp             EEEEECCBSSSBCCEEEEEETTTTEEEEEE---CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETT-TTEE
T ss_pred             EEEEEeCCCCCCcceEEEEeCCCCeEEECC---CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCC-CCce
Confidence            466666644    67889998887542211   11111111222222  67777777755      458888887 3322


Q ss_pred             eEEEEecC-----------CCCEEEEEcC---------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        356 LNVLRGHK-----------KGTQIVSTGA---------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       356 ~~~~~~~~-----------~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      .. +...+           ++..++.|+.         -..+.+||+.+.+-...-.           .|....    .-
T Consensus       131 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-----------~p~~r~----~~  194 (306)
T 3ii7_A          131 HT-KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-----------MIEARK----NH  194 (306)
T ss_dssp             EE-ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-----------CSSCCB----SC
T ss_pred             Ee-CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-----------ccchhh----cc
Confidence            11 11111           2344444443         3446777777664322211           111110    11


Q ss_pred             eEEEEcCCCCEEEEEeCC-----CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEC
Q psy10942        416 WFVNFSPLDRILISSSGD-----ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSI  483 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~  483 (537)
                      ..+.+  ++++++.|+.+     ..+.+||..+.+-  +..+.........+.+  ++++++.|+.+     ..+.+||+
T Consensus       195 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~  270 (306)
T 3ii7_A          195 GLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNT  270 (306)
T ss_dssp             EEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred             eEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence            11112  55666666543     4688999887542  2222211112222222  66777888754     46889998


Q ss_pred             CCCe
Q psy10942        484 KTST  487 (537)
Q Consensus       484 ~~~~  487 (537)
                      .+.+
T Consensus       271 ~~~~  274 (306)
T 3ii7_A          271 ETDK  274 (306)
T ss_dssp             TTTE
T ss_pred             CCCe
Confidence            7764

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.68  E-value=0.96  Score=40.19  Aligned_cols=176  Identities=13%  Similarity=0.173  Sum_probs=85.6

Q ss_pred             eEEEEEeCC-----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEccCCcee
Q psy10942        286 ELLASGSLD-----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-----TVKVWSTTGGLKL  355 (537)
Q Consensus       286 ~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~~  355 (537)
                      ..++.|+.+     ..+.+||..+.+-...   ..+......-..+.+  ++++++.|+.++     .+.+||+. ...-
T Consensus        63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W  136 (302)
T 2xn4_A           63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV---ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIK-SNEW  136 (302)
T ss_dssp             EEEEESCBCSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETT-TTEE
T ss_pred             EEEEEeCcCCCccccceEEECCCCCceeeC---CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCC-CCeE
Confidence            455566543     3588899887653221   111111111222222  677777777553     46778876 3222


Q ss_pred             eEEEEecC-----------CCCEEEEEcCC-------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942        356 LNVLRGHK-----------KGTQIVSTGAD-------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF  417 (537)
Q Consensus       356 ~~~~~~~~-----------~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~  417 (537)
                      .. +...+           ++..++.|+.+       ..+.+||+.+.+-...-           -.|....    ....
T Consensus       137 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~----~~~~  200 (302)
T 2xn4_A          137 FH-VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-----------EMSTRRS----GAGV  200 (302)
T ss_dssp             EE-ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-----------CCSSCCB----SCEE
T ss_pred             ee-cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-----------CCccccc----cccE
Confidence            11 11111           23444444432       34667777665432221           1111110    1111


Q ss_pred             EEEcCCCCEEEEEeCC-----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCCC-----cEEEEECCC
Q psy10942        418 VNFSPLDRILISSSGD-----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGADG-----LLKLWSIKT  485 (537)
Q Consensus       418 ~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~vwd~~~  485 (537)
                      +.  -++++++.|+.+     ..+.+||..+.+-..  .+......- .++ ..++++++.|+.++     .+.+||+.+
T Consensus       201 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~  276 (302)
T 2xn4_A          201 GV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GVC-AVNGLLYVVGGDDGSCNLASVEYYNPTT  276 (302)
T ss_dssp             EE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred             EE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-eEE-EECCEEEEECCcCCCcccccEEEEcCCC
Confidence            11  256677777654     468899988754322  221111111 122 23667777777553     489999877


Q ss_pred             Ce
Q psy10942        486 ST  487 (537)
Q Consensus       486 ~~  487 (537)
                      .+
T Consensus       277 ~~  278 (302)
T 2xn4_A          277 DK  278 (302)
T ss_dssp             TE
T ss_pred             Ce
Confidence            65

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=95.60  E-value=1.2  Score=39.94  Aligned_cols=64  Identities=9%  Similarity=0.141  Sum_probs=35.0

Q ss_pred             CCCCEEEEEeC------CCcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        422 PLDRILISSSG------DATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       422 ~~~~~l~~~~~------dg~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                      .++++++.|+.      -..+.+||..+.+-..  .+...... .+++. -++++++.|+.+     ..+.+||+.+.+
T Consensus       157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            35666666653      2458999988754322  22111111 12222 256777777653     347788887764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=95.56  E-value=1.1  Score=40.11  Aligned_cols=64  Identities=8%  Similarity=0.045  Sum_probs=36.4

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCee
Q psy10942        423 LDRILISSSGD-----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTSTC  488 (537)
Q Consensus       423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~~  488 (537)
                      ++++++.|+.+     ..+.+||..+.+-..  .+......-. ++.. ++++++.|+.+     ..+.+||+.+.+-
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W  243 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAG-VCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW  243 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccce-EEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence            56667776654     468899987754322  2211111112 2222 66677777654     4689999887653

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.37  E-value=0.31  Score=44.67  Aligned_cols=102  Identities=12%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEee---cCCcceEEEEEecC---CCEEEEEeC-C-----CcEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLE---GHDASVLRCHFINK---GTQIVSTGA-D-----GLLK  479 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---~~~~~v~~~~~s~~---~~~l~s~~~-d-----g~v~  479 (537)
                      ....++|.|+|+++++ ..+|.|++++  +++.  +..+.   ........++|+|+   +..|+.+.. .     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            5678999999985554 5669999998  3332  22221   12346789999998   555554433 2     5688


Q ss_pred             EEECCCCee------EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        480 LWSIKTSTC------VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       480 vwd~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      .++...+..      +..+..+..        ..+.+..+   +|.|||.+.++.+
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~--------~~h~~~~l---~~~pdG~Lyv~~G  153 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPH--------GLHSGGRI---AFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTT--------CCCCCCCE---EECTTSCEEEECC
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCC--------CCcCCceE---EECCCCCEEEEEC
Confidence            888764421      111211000        11222567   9999997666644

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=95.33  E-value=0.49  Score=50.88  Aligned_cols=236  Identities=11%  Similarity=0.093  Sum_probs=127.0

Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                      .+|..+.+|.-. ..++.  ++++..........+..++.-+.+-+..   .++.. .+..|.-|++.+...+.+.+.+.
T Consensus        73 MnP~~~iiALra-g~~lQ--iFnl~~k~klks~~~~e~VvfWkWis~~---~l~lV-T~~aVyHW~~~~~s~P~k~fdR~  145 (1630)
T 1xi4_A           73 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISLN---TVALV-TDNAVYHWSMEGESQPVKMFDRH  145 (1630)
T ss_pred             cCCCcceEEEec-CCeEE--EeehHHhhhhcccccCCCceEEEecCCC---eeEEE-cCCeEEEeccCCCCccHHHHhcc
Confidence            455555555433 56788  8998875433333333333333333332   22222 24689999997654433322222


Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEe-------CCCcEEEEEccCCceeeEEEEec------------CCCCEEEE-Ec---
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGS-------LDKTVKVWSTTGGLKLLNVLRGH------------KKGTQIVS-TG---  372 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~l~~-~~---  372 (537)
                      -.-....|..-..+++.++++..+       -.|.+.+|....  +.-+.+.+|            +....+++ +.   
T Consensus       146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~  223 (1630)
T 1xi4_A          146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  223 (1630)
T ss_pred             hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence            111246677888889998877543       347788888762  222223332            22222332 22   


Q ss_pred             CCCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        373 ADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       373 ~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                      ..+++++.++... ..-.   ........+.+.|+...   .-..++..|+....+...+.-|.|++||+.++.++..-+
T Consensus       224 ~g~kLhi~Ei~~~~~~~~---~f~kk~~~~~~~~~~~~---Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r  297 (1630)
T 1xi4_A          224 AGGKLHIIEVGTPPTGNQ---PFPKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR  297 (1630)
T ss_pred             CCceEEEEecCCCccCCC---CCccccccccCCccccc---CcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence            1368888887543 1111   11112233444443111   134567788888888888899999999999998877665


Q ss_pred             cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      -...+|...+-+....-++.....|.|.--.+...
T Consensus       298 is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~  332 (1630)
T 1xi4_A          298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (1630)
T ss_pred             ccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence            44455544443333223333335555554444443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=95.26  E-value=0.22  Score=45.20  Aligned_cols=107  Identities=14%  Similarity=0.049  Sum_probs=62.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEe----ecCCcceEEEEEecC---CCEEEEE-e--CCCcEEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSL----EGHDASVLRCHFINK---GTQIVST-G--ADGLLKLW  481 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~----~~~~~~v~~~~~s~~---~~~l~s~-~--~dg~v~vw  481 (537)
                      ..+.|+|.|||+++++-...|.|++++...++.  +..+    .........|+++|+   +..|+.. +  .++.|.-|
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~  112 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM  112 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence            567899999999777765589999998665543  2211    123456789999995   3444432 2  34556666


Q ss_pred             ECCCCe--------eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        482 SIKTST--------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       482 d~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      .+..+.        ....+..       ......+....|   .|.|||.+.++.++
T Consensus       113 ~~~~~~~~~~~~~~~~~i~~~-------~p~~~~H~g~~l---~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          113 LYDEKKPSGEQLGAPDTVFRG-------IPKGVIHNGGRI---AFGPDKMLYAGTGE  159 (347)
T ss_dssp             EBCTTSCTTCCBCCCEEEEEE-------ECCCSSCCCCCE---EECTTSCEEEECBC
T ss_pred             EeCCCCcccccCCCcEEEEEc-------CCCCCCccCccc---cCCCCCCEEEEECC
Confidence            654421        1111110       000112233567   99999987777653

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=95.24  E-value=1.7  Score=39.27  Aligned_cols=103  Identities=13%  Similarity=0.080  Sum_probs=61.1

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEEC--CCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCL--TDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST  491 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~  491 (537)
                      .+..+++.|++.+++.+...+..+-.|-  .+.+.+.  ......+..+.+.+++..++ ++.+|.+++.+.+.|+....
T Consensus       164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~  240 (327)
T 2xbg_A          164 VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGE  240 (327)
T ss_dssp             CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECC
T ss_pred             ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEe
Confidence            5677889998888877654333333442  3444442  23456788999999887654 55678777765333443333


Q ss_pred             ecCC----ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942        492 FDKH----ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV  534 (537)
Q Consensus       492 ~~~~----~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i  534 (537)
                      +...    ...+           .++   ++.+++..++++ .+|.|
T Consensus       241 ~~~~~~~~~~~~-----------~~v---~~~~~~~~~~~g-~~g~i  272 (327)
T 2xbg_A          241 LLSPLRRNSVGF-----------LDL---AYRTPNEVWLAG-GAGAL  272 (327)
T ss_dssp             CBCTTSSCCSCE-----------EEE---EESSSSCEEEEE-STTCE
T ss_pred             ccCCcccCCcce-----------EEE---EecCCCEEEEEe-CCCeE
Confidence            2211    1123           566   888877766654 45655

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.00  E-value=1.8  Score=41.08  Aligned_cols=29  Identities=3%  Similarity=0.093  Sum_probs=20.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTT  350 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~  350 (537)
                      ....|+|.|+|+++++-...+.|++++..
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~   56 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPE   56 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence            45799999999877765443467776654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.00  E-value=2.1  Score=39.13  Aligned_cols=61  Identities=10%  Similarity=0.084  Sum_probs=37.5

Q ss_pred             cceEEEEEe-------cCCCEEEEEeCCCcEEEEECCCC-eeE--EEe-cCCccceeccCCCCCCccccccceeeecCCC
Q psy10942        455 ASVLRCHFI-------NKGTQIVSTGADGLLKLWSIKTS-TCV--STF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSD  523 (537)
Q Consensus       455 ~~v~~~~~s-------~~~~~l~s~~~dg~v~vwd~~~~-~~~--~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~  523 (537)
                      .....++|.       .+|.++++.-..+.|...++... +..  ..+ .+....+           ..+   ++.|||.
T Consensus       259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp-----------~~v---~~~pDG~  324 (354)
T 3a9g_A          259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRL-----------RDV---VIDDDGG  324 (354)
T ss_dssp             CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCE-----------EEE---EECTTSC
T ss_pred             cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCe-----------eEE---EECCCCc
Confidence            346788883       46766666666677888887643 221  122 1112233           777   9999998


Q ss_pred             EEEEEe
Q psy10942        524 CEYRGG  529 (537)
Q Consensus       524 ~l~s~~  529 (537)
                      +.++..
T Consensus       325 lyv~~~  330 (354)
T 3a9g_A          325 ILISTS  330 (354)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            776654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.96  E-value=1.1  Score=41.13  Aligned_cols=61  Identities=10%  Similarity=0.079  Sum_probs=29.6

Q ss_pred             EEEEEe-CCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeC-C---------CcEEEEEcc
Q psy10942        287 LLASGS-LDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSL-D---------KTVKVWSTT  350 (537)
Q Consensus       287 ~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-d---------~~i~i~d~~  350 (537)
                      +++.|+ ....+.+||..+....... ...+. .....-..+.+  ++++++.|+. +         ..+.+||+.
T Consensus        22 iyv~GG~~~~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~   94 (357)
T 2uvk_A           22 VYIGLGSAGTAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK   94 (357)
T ss_dssp             EEEECGGGTTCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred             EEEEeCcCCCeEEEEccccCCCCeeE-CCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence            344444 3457888998742211111 11111 11111222223  5677777765 2         458888886

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.93  E-value=1.9  Score=38.37  Aligned_cols=167  Identities=9%  Similarity=0.056  Sum_probs=81.4

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeEEEEecC------
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLNVLRGHK------  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~------  363 (537)
                      ..+.+||..+.+-...   ..+......-..+.+  ++++++.|+.+     ..+.+||+. ..+-.. +...+      
T Consensus        90 ~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~-~~~~p~~r~~~  162 (308)
T 1zgk_A           90 SALDCYNPMTNQWSPC---APMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPE-RDEWHL-VAPMLTRRIGV  162 (308)
T ss_dssp             CCEEEEETTTTEEEEC---CCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETT-TTEEEE-CCCCSSCCBSC
T ss_pred             ceEEEECCCCCeEeEC---CCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCC-CCeEeE-CCCCCccccce
Confidence            4688899887653221   111111112222333  66777776643     357888876 222111 11101      


Q ss_pred             -----CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942        364 -----KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD  433 (537)
Q Consensus       364 -----~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  433 (537)
                           ++..++.|+.+     ..+.+||+.+.+-...-.           .|..+.    ....+.+  ++++++.|+.+
T Consensus       163 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-----------~p~~r~----~~~~~~~--~~~iyv~GG~~  225 (308)
T 1zgk_A          163 GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-----------MNTIRS----GAGVCVL--HNCIYAAGGYD  225 (308)
T ss_dssp             EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-----------CSSCCB----SCEEEEE--TTEEEEECCBC
T ss_pred             EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-----------CCCccc----cceEEEE--CCEEEEEeCCC
Confidence                 24455555543     457777776654322111           111110    1111222  56677777654


Q ss_pred             -----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942        434 -----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST  487 (537)
Q Consensus       434 -----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~  487 (537)
                           ..+.+||+.+.+-..  .+....... +++. -++++++.|+.+     ..+.+||+.+.+
T Consensus       226 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          226 GQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             SSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCCccceEEEEeCCCCcEEECCCCCCCccce-EEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence                 568999988754322  222111111 2222 256777777654     357888887764

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.67  E-value=0.11  Score=43.10  Aligned_cols=101  Identities=13%  Similarity=-0.125  Sum_probs=60.3

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee------eeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC------LKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS  486 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~  486 (537)
                      .+..++|+|+|.+.++  .+|.++-.+..+...      -..+-. --..-..+.|.|+|.+.++  .||.|+-++..+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            5678999999987776  667776666544111      111110 0111478899999987777  5698888875432


Q ss_pred             eeEEE------e-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942        487 TCVST------F-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV  534 (537)
Q Consensus       487 ~~~~~------~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i  534 (537)
                      ..-.-      + ..--..+           ..|   .|.|+|.+.+..  |+.+
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~-----------~~l---ff~p~G~Lyav~--dg~l  156 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGF-----------KFL---FFHPNGYLYAVH--GQQF  156 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGE-----------EEE---EECTTSCEEEEE--TTEE
T ss_pred             CCCceeccccEeccCCCCce-----------EEE---EECCCceEEEEe--CCcE
Confidence            11100      0 0011233           556   999999888776  6654

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.58  E-value=1.1  Score=37.18  Aligned_cols=63  Identities=10%  Similarity=-0.039  Sum_probs=41.3

Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceee------eEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCL------KSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                      .++.|.|+|.+.++  .||.|+-++-.+....      ..+ +.--..+..+.|.|+|.+.+..  |+.++-+.
T Consensus        91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~  160 (236)
T 1tl2_A           91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL  160 (236)
T ss_dssp             SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred             eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence            67889999988887  5698888875431110      111 1112467999999999877766  77754443

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=94.57  E-value=0.8  Score=40.75  Aligned_cols=68  Identities=7%  Similarity=0.015  Sum_probs=41.5

Q ss_pred             EEEcCCCCEEEEEe----CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC-CCcEEEEECCCCeeEE
Q psy10942        418 VNFSPLDRILISSS----GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVS  490 (537)
Q Consensus       418 ~~~s~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~  490 (537)
                      ..|++++++|+-..    .+..|+..++.. .....+..+..    ..++++++.|+-.+. ...|.+-++..+....
T Consensus       109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~  181 (302)
T 3s25_A          109 IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL  181 (302)
T ss_dssp             EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred             cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence            35677888888765    234566666654 33344443322    456778888876654 5678888876655433

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.03  E-value=2.8  Score=38.18  Aligned_cols=56  Identities=9%  Similarity=-0.013  Sum_probs=29.7

Q ss_pred             cEEEEECCCc--eeeeEeecCCcceEEEEEecCCCEEEEEeCCC------cEEEEECCCCeeEEEe
Q psy10942        435 TIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTGADG------LLKLWSIKTSTCVSTF  492 (537)
Q Consensus       435 ~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg------~v~vwd~~~~~~~~~~  492 (537)
                      .+.+||+.+.  +.+..+......  ..+...++++++.|+.++      .|.++++++++.+...
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~  349 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN  349 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred             eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence            5778998764  333333322222  122334677888888653      3566688777766543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=93.66  E-value=3.7  Score=36.62  Aligned_cols=64  Identities=13%  Similarity=0.099  Sum_probs=35.8

Q ss_pred             CCCEEEEEeCCC-----cEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC--------------CcEEEE
Q psy10942        423 LDRILISSSGDA-----TIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD--------------GLLKLW  481 (537)
Q Consensus       423 ~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~v~vw  481 (537)
                      ++++++.|+.++     .+.+||..+.+-...  +....... +++ .-++++++.|+.+              ..+.+|
T Consensus       196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y  273 (315)
T 4asc_A          196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRY  273 (315)
T ss_dssp             TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred             CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eEE-EECCEEEEECCccccCcCCccccccccCcEEEe
Confidence            567777776544     588899877543222  21111111 222 2256777777753              237788


Q ss_pred             ECCCCee
Q psy10942        482 SIKTSTC  488 (537)
Q Consensus       482 d~~~~~~  488 (537)
                      |+.+.+-
T Consensus       274 d~~~~~W  280 (315)
T 4asc_A          274 NEEEKKW  280 (315)
T ss_dssp             ETTTTEE
T ss_pred             cCCCChh
Confidence            8877653

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=92.95  E-value=0.76  Score=43.72  Aligned_cols=107  Identities=15%  Similarity=0.154  Sum_probs=60.3

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEeec------CCcceEEEEEecC---CCEEEEEeC--------
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLEG------HDASVLRCHFINK---GTQIVSTGA--------  474 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~------~~~~v~~~~~s~~---~~~l~s~~~--------  474 (537)
                      ..+.|+|.|+|+++++-...+.|++++..+++.  +..+..      .......|+|+|+   +..|+.+..        
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            567899999999777654445788887655443  222221      2355779999995   555554432        


Q ss_pred             -----CCcEEEEECCCC--ee---EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        475 -----DGLLKLWSIKTS--TC---VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       475 -----dg~v~vwd~~~~--~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                           ...|.-++...+  ..   ...+..       ......+.+..|   +|.|||.+.++.++
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~-------~p~~~~H~~~~l---~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAG-------LPSSKDHQSGRL---VIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEE-------ECCCSSCCEEEE---EECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEc-------CCCCCCCCCCeE---eECCCCeEEEEECC
Confidence                 134555554322  11   111110       000112233667   99999998877654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=92.72  E-value=0.39  Score=45.91  Aligned_cols=106  Identities=12%  Similarity=0.052  Sum_probs=69.5

Q ss_pred             eeeEEEEcCCCCEEEEEeC-CCcEEEEECCCcee-------------eeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        414 GVWFVNFSPLDRILISSSG-DATIKLWCLTDYVC-------------LKSLEGHDASVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                      ....+.++|||+++++++. +.++.++|+.+...             ....+. .-.....+|.++|....|.--|..|.
T Consensus       324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvv  402 (638)
T 3sbq_A          324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVV  402 (638)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred             CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEE
Confidence            4566889999999888764 78899999875211             222232 23457789999995555666899999


Q ss_pred             EEECCCC----------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942        480 LWSIKTS----------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       480 vwd~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                      .|++...          ..+..+..|-.+-.....      .+=   .-.|||++|++..
T Consensus       403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~------~ge---t~~~dGk~lv~ln  453 (638)
T 3sbq_A          403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHAS------LCE---TNEADGKWLVALS  453 (638)
T ss_dssp             EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEET------TTT---STTCCSCEEEEEE
T ss_pred             EEeccHHHHHhcCccCCeeeeccccccCCcccccC------CCc---cCCCCccEEEEec
Confidence            9998653          456666666543311111      111   3467889988874

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=92.67  E-value=0.23  Score=44.87  Aligned_cols=113  Identities=6%  Similarity=-0.031  Sum_probs=70.8

Q ss_pred             cceEEEecCcceEEEEEcCccceeeeeccc--cccceeeeEeecCccccccCCcEEEEEe-CccceEEeeeccceehhhh
Q psy10942         16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAY--ESLETCAVFHLSDETESKSGGKTFVLAG-GEKSLLHYYETSAVKELYQ   92 (537)
Q Consensus        16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~wd~~~~~~~~~   92 (537)
                      +..++.++.||.|.-.|.++|+.+=+++..  .+....   ..+.    ...++..++.. ..||.|..++..+|.....
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~---~~~~----~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~   82 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEI---QEPS----RLETYETLIIEPFGDGNIYYFNAHQGLQKLP   82 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEEC---CCSC----TTTSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEe---cCCc----cccCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence            457888999999999999999998888754  121111   0011    01133444443 5799999999888865433


Q ss_pred             cCCCcceE--EEEEe-----------ccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942         93 HGLSSPLV--RIVRS-----------SVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        93 ~~~~~~v~--~~~~s-----------~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      +.....+.  -+...           ..+..+++++.++.+.-.|+.+           ++.+..+.
T Consensus        83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t-----------G~~~W~~~  138 (339)
T 2be1_A           83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN-----------GEIISAFG  138 (339)
T ss_dssp             EEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTT-----------CCEEEEES
T ss_pred             eccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCC-----------CcEEEEEe
Confidence            33221110  01111           1455778889999999999999           67776665

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=92.06  E-value=1.1  Score=40.86  Aligned_cols=108  Identities=12%  Similarity=0.103  Sum_probs=58.3

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE---e----ecCCcceEEEEEecC---CCEEEEEe-C-------C
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS---L----EGHDASVLRCHFINK---GTQIVSTG-A-------D  475 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~----~~~~~~v~~~~~s~~---~~~l~s~~-~-------d  475 (537)
                      ....|+|.|+|+.|+++...|.|++++.. ++....   +    .........++++|+   +..|+.+. .       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            56789999999834445567999999853 332211   1    112345789999996   45554442 2       2


Q ss_pred             CcEEEEECCCC--ee--EEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        476 GLLKLWSIKTS--TC--VST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       476 g~v~vwd~~~~--~~--~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      ..|..|++..+  ..  ... +..-...     ....+.+..+   +|.|||.+.++.+.
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~-----~~~~h~~~~l---~~~pdG~Lyv~~Gd  149 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKL-----STGNHFGGRL---VFDGKGYLFIALGE  149 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCC-----BSSSCCCCCE---EECSSSEEEEEECC
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCC-----CCCcccCccE---EECCCCcEEEEECC
Confidence            34666665432  11  111 1110000     0011223567   99999976666543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=91.82  E-value=6.7  Score=34.94  Aligned_cols=66  Identities=11%  Similarity=0.098  Sum_probs=35.7

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC--------------CcEEEE
Q psy10942        423 LDRILISSSGD-----ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD--------------GLLKLW  481 (537)
Q Consensus       423 ~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~v~vw  481 (537)
                      ++++++.|+.+     ..+.+||+.+.+-  +..+....... +++ ..++++++.|+.+              ..+.+|
T Consensus       206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y  283 (318)
T 2woz_A          206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY  283 (318)
T ss_dssp             TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred             CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence            45667776543     3577889876432  22222111111 222 2356677777643              358888


Q ss_pred             ECCCCeeEE
Q psy10942        482 SIKTSTCVS  490 (537)
Q Consensus       482 d~~~~~~~~  490 (537)
                      |+.+.+=..
T Consensus       284 d~~~~~W~~  292 (318)
T 2woz_A          284 EDDKKEWAG  292 (318)
T ss_dssp             ETTTTEEEE
T ss_pred             eCCCCEehh
Confidence            988765433

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=90.53  E-value=5.8  Score=35.58  Aligned_cols=103  Identities=11%  Similarity=0.043  Sum_probs=66.4

Q ss_pred             CcceEEEecCcceEEEEEcCccceee-------eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc--
Q psy10942         15 TSEFSVHCGRDKVLFTWDLSSRKQLR-------SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS--   85 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~--   85 (537)
                      +..++++++++|.++--.++..+..+       .++..+.+..+  ....        ....++..+.+|.+..+...  
T Consensus       108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~--~~~~--------~~d~ill~T~~G~~~rf~~~~~  177 (327)
T 3uc1_A          108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGA--VLCS--------AGDDLLLVSANGQSIRFSATDE  177 (327)
T ss_dssp             SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEE--EEEC--------TTCEEEEEETTSEEEEEECCTT
T ss_pred             CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEE--EEec--------CCCEEEEEECCCeEEEEECccc
Confidence            57899999999999998876643322       23233333333  3333        22346666668877666655  


Q ss_pred             c---------eehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         86 A---------VKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        86 ~---------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      .         |.....+...+.|.++...+++.+|+.++..|.++.-.+..
T Consensus       178 eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e  228 (327)
T 3uc1_A          178 ALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE  228 (327)
T ss_dssp             TSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             ccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence            2         22233344456788888777777889999999988887665

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=86.55  E-value=7.4  Score=36.94  Aligned_cols=52  Identities=12%  Similarity=-0.004  Sum_probs=33.6

Q ss_pred             eeeEEEEcCCCC-EEEEEeCCCcEEEEECCCc---eeeeEee---------cCCcceEEEEEecC
Q psy10942        414 GVWFVNFSPLDR-ILISSSGDATIKLWCLTDY---VCLKSLE---------GHDASVLRCHFINK  465 (537)
Q Consensus       414 ~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~---------~~~~~v~~~~~s~~  465 (537)
                      ..+.|+|.||+. .|+++...|.|++++....   +.+..+.         ........|+|+|+
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            567899999985 4455567899999975422   1222211         11356789999996

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=86.12  E-value=17  Score=32.03  Aligned_cols=155  Identities=10%  Similarity=0.034  Sum_probs=79.0

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCceeeEEEEecC------CCC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHK------KGT  366 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~------~~~  366 (537)
                      ..|+..++.+.+...      +..  .  .+..|+++++.|+-..  .++.-.|+.+...+.....+..+.      .++
T Consensus        88 ~~Iy~i~~dg~~~~~------l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~~~~~~~g~  157 (302)
T 3s25_A           88 NSLCRIKRNGHGSTV------LDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDR  157 (302)
T ss_dssp             EEEEEEETTSCCCEE------EEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCCCCSEEETT
T ss_pred             CeEEEEeCCCCcceE------eec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCceEeeEECC
Confidence            467777777665311      111  1  1236788888888776  344444444332233333343332      244


Q ss_pred             EEEEEcC-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEEEEECCC
Q psy10942        367 QIVSTGA-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIKLWCLTD  443 (537)
Q Consensus       367 ~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~  443 (537)
                      .|.-.+. ..+|...++..+.....+.+                    .. ...++|++.+|+-...+  ..|..-++..
T Consensus       158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--------------------~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG  216 (302)
T 3s25_A          158 YFYYNNPKNGQLYRYDTASQSEALFYDC--------------------NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINN  216 (302)
T ss_dssp             EEEEECTTTCCEEEEETTTTEEEEEECS--------------------CE-EEEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred             EEEEEeCCCceEEEEECCCCCEEEEeCC--------------------Cc-cceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence            4443332 45666666655543322221                    11 12345788887776544  3566666655


Q ss_pred             ceeeeEeecCCcceEEEEEecCCCEEEEEeC--CCcEEEEECCC
Q psy10942        444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGA--DGLLKLWSIKT  485 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~v~vwd~~~  485 (537)
                      .. ...+..  ..+  ..|+|++.+|+-++.  .+.|..-+++.
T Consensus       217 ~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          217 PN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             CC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred             CC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence            43 333331  223  347888888876533  35566666643

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=82.41  E-value=25  Score=37.02  Aligned_cols=38  Identities=21%  Similarity=0.297  Sum_probs=32.9

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                      .+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            46677788888999999999999999999999887753

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=80.89  E-value=28  Score=30.34  Aligned_cols=158  Identities=12%  Similarity=0.103  Sum_probs=77.6

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce---------eeEEEEecCC
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK---------LLNVLRGHKK  364 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~~~~~~~~  364 (537)
                      ||.++.|-.....++-     ........|..++...+. .++. . ||.++.|-.....+         .+..+..-  
T Consensus        41 ~G~v~~wG~n~~Gqlg-----~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G--  110 (282)
T 3qhy_B           41 GGKVLGWGANLNGQLT-----MPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAG--  110 (282)
T ss_dssp             TTEEEEEECCSSSTTS-----CCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEE--
T ss_pred             CCEEEEEeCCCCCCCC-----CCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECc--
Confidence            8999999766543211     111123457777776443 3444 4 89999997653221         12222221  


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                      ....+.-. +|.+..|-....-.+........                 .|..++...+.. ++ -. ||.|..|-....
T Consensus       111 ~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~-----------------~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~  169 (282)
T 3qhy_B          111 AWASYALK-DGKVIAWGDDSDGQTTVPAEAQS-----------------GVTALDGGVYTA-LA-VK-NGGVIAWGDNYF  169 (282)
T ss_dssp             TTEEEEEE-TTEEEEEECCTTSTTSCCGGGGS-----------------SEEEEEECSSEE-EE-EE-TTEEEEEECCTT
T ss_pred             CCEEEEEe-CCeEEEecCCCCCcCCCCccCCC-----------------CeEEEEcccCEE-EE-EE-CCEEEEecCCCC
Confidence            33444455 99999997654322111001111                 333333332222 22 22 577777765432


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT  485 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~  485 (537)
                      -.+..-..-...|..++...+. .++.  .||.|+.|-...
T Consensus       170 gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~  207 (282)
T 3qhy_B          170 GQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR  207 (282)
T ss_dssp             STTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred             CCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence            1111111113457777665442 2333  589999997543

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=80.25  E-value=52  Score=33.15  Aligned_cols=191  Identities=11%  Similarity=0.076  Sum_probs=94.1

Q ss_pred             eEEEEEeCC----CeEEEEECCCCceeeeeec---ccccccCCCeEEEEEcCCCCEEEEEeCCC------cEEEEEccCC
Q psy10942        286 ELLASGSLD----KTVKVWSTTGGLKLLNVLR---GHKKGHEKDINCVTVSPNDKLLASGSLDK------TVKVWSTTGG  352 (537)
Q Consensus       286 ~~l~~~~~d----~~i~i~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~d~------~i~i~d~~~~  352 (537)
                      ..++.|+.+    ..+.+||..+..-......   .........-..+.+..++++++.|+.++      .+.+||+.. 
T Consensus       399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t-  477 (695)
T 2zwa_A          399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT-  477 (695)
T ss_dssp             CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT-
T ss_pred             EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC-
Confidence            355666543    4688899887653221100   00111111223333332677778877543      477888773 


Q ss_pred             ceeeE-----------EEEecCCCCEEEEEcCCC--cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942        353 LKLLN-----------VLRGHKKGTQIVSTGADG--LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN  419 (537)
Q Consensus       353 ~~~~~-----------~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~  419 (537)
                      ..-..           ....-.++..++.|+.++  .+.+||..+.+-...-....        .|....    ....+.
T Consensus       478 ~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~--------~p~~r~----~~~a~v  545 (695)
T 2zwa_A          478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE--------FFQNSL----VSAGLE  545 (695)
T ss_dssp             TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG--------GGGSCC----BSCEEE
T ss_pred             CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCC--------CCCccc----ceeEEE
Confidence            21111           111112456666666544  68888887765332211000        011110    223344


Q ss_pred             EcCC-CCEEEEEeC--C-----CcEEEEECCCcee-----eeEeecC--Ccc-eEEEEEecCCCEEEEEeC--------C
Q psy10942        420 FSPL-DRILISSSG--D-----ATIKLWCLTDYVC-----LKSLEGH--DAS-VLRCHFINKGTQIVSTGA--------D  475 (537)
Q Consensus       420 ~s~~-~~~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~~--~~~-v~~~~~s~~~~~l~s~~~--------d  475 (537)
                      +..+ +++++.|+.  +     ..+.+||+.+.+.     -..+...  ... -.+++...++++++.|+.        .
T Consensus       546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~  625 (695)
T 2zwa_A          546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRT  625 (695)
T ss_dssp             EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTT
T ss_pred             EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCC
Confidence            5554 666777765  2     4588999887651     1111111  111 112333343677777774        3


Q ss_pred             CcEEEEECCCCeeE
Q psy10942        476 GLLKLWSIKTSTCV  489 (537)
Q Consensus       476 g~v~vwd~~~~~~~  489 (537)
                      ..+.+||+.+.+-.
T Consensus       626 ~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          626 NSIISLDPLSETLT  639 (695)
T ss_dssp             TSEEEEETTTTEEE
T ss_pred             CeEEEEECCCCeEE
Confidence            46999999877543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	537
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-25
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-21
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-21
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-20
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-20
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-12
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-11
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-15
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-12
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-11
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-13
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	8e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	9e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-12
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-12
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-10
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-12
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-12
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	8e-12
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-12
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	9e-10
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.003
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	9e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-09
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-10
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.001
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-10
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	9e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	9e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	6e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.002
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.002
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-08
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-08
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	5e-08
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.003
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	5e-09
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-08
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-06
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	7e-08
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	1e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.004

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (259), Expect = 2e-25
 Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 53/261 (20%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---------------------------- 317
            ++ S S D T+KVW    G      L+GH                              
Sbjct: 30  SVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88

Query: 318 ----------GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--- 364
                     GH+ +++ V++ PN   + S S DKT+K+W    G   +    GH++   
Sbjct: 89  QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-YCVKTFTGHREWVR 147

Query: 365 -------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG---G 414
                  GT I S   D  +++W + T  C +   +H   +  ++   + +        G
Sbjct: 148 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 207

Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474
                       L+S S D TIK+W ++  +CL +L GHD  V    F + G  I+S   
Sbjct: 208 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 267

Query: 475 DGLLKLWSIKTSTCVSTFDKH 495
           D  L++W  K   C+ T + H
Sbjct: 268 DKTLRVWDYKNKRCMKTLNAH 288

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.9 bits (229), Expect = 2e-21
 Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 53/224 (23%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
           + S S DKT+K+W    G   +    GH++        V  + +  L+AS S D+TV+VW
Sbjct: 116 IVSASRDKTIKMWEVQTG-YCVKTFTGHREWV----RMVRPNQDGTLIASCSNDQTVRVW 170

Query: 348 STTGGLKLLNVLRGHKK------------------------------GTQIVSTGADGLL 377
                 +    LR H+                               G  ++S   D  +
Sbjct: 171 VVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 229

Query: 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIK 437
           K+W + T  C+ T   H                    V  V F    + ++S + D T++
Sbjct: 230 KMWDVSTGMCLMTLVGH-----------------DNWVRGVLFHSGGKFILSCADDKTLR 272

Query: 438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481
           +W   +  C+K+L  H+  V    F      +V+   D  +K+W
Sbjct: 273 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.0 bits (224), Expect = 9e-21
 Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 8/179 (4%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
            GH   +  V   P   ++ S S D T+KVW    G      L+GH    Q +S    G 
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGK 72

Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436
           L        T      +    I T+                V+  P    ++S+S D TI
Sbjct: 73  LLASCSADMTIKLWDFQGFECIRTMHGHDHNV-------SSVSIMPNGDHIVSASRDKTI 125

Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           K+W +    C+K+  GH   V        GT I S   D  +++W + T  C +   +H
Sbjct: 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 184

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 496
           K W +       +L GH + V R  F    + +VS   D  +K+W  +T     T   H 
Sbjct: 1   KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59

Query: 497 LKIR 500
             ++
Sbjct: 60  DSVQ 63

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 90.2 bits (222), Expect = 2e-20
 Identities = 39/196 (19%), Positives = 60/196 (30%), Gaps = 53/196 (27%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
           L  SG+ D + K+W    G            GHE DIN +   PN    A+GS D T ++
Sbjct: 198 LFVSGACDASAKLWDVREG-MCRQTF----TGHESDINAICFFPNGNAFATGSDDATCRL 252

Query: 347 WSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD 406
           +                                                       +   
Sbjct: 253 FD------------------------------------------------LRADQELMTY 264

Query: 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKG 466
            +  I  G+  V+FS   R+L++   D    +W          L GHD  V      + G
Sbjct: 265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324

Query: 467 TQIVSTGADGLLKLWS 482
             + +   D  LK+W+
Sbjct: 325 MAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.5 bits (163), Expect = 7e-13
 Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 19/141 (13%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
                  VS   D   KLW ++   C  TF  H                    +  + F 
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGH-----------------ESDINAICFF 235

Query: 422 PLDRILISSSGDATIKL--WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
           P      + S DAT +L        +   S +     +    F   G  +++   D    
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295

Query: 480 LWSIKTSTCVSTFDKHALKIR 500
           +W    +        H  ++ 
Sbjct: 296 VWDALKADRAGVLAGHDNRVS 316

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.1 bits (162), Expect = 1e-12
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL +G  D    VW          VL GH       ++C+ V+ +   +A+GS D  +K
Sbjct: 283 RLLLAGYDDFNCNVWDALKA-DRAGVLAGHDNR----VSCLGVTDDGMAVATGSWDSFLK 337

Query: 346 VWS 348
           +W+
Sbjct: 338 IWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.1 bits (162), Expect = 1e-12
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 14/106 (13%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
              A+GS D T +++          ++          I  V+ S + +LL +G  D    
Sbjct: 239 NAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295

Query: 346 VWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWS 381
           VW          VL GH            G  + +   D  LK+W+
Sbjct: 296 VWDALKA-DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.4 bits (150), Expect = 3e-11
 Identities = 29/216 (13%), Positives = 65/216 (30%), Gaps = 37/216 (17%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
           +GH   I  +    + +LL S S D  + +W +    K+  +              +   
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111

Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITK------------------------------- 405
           +    +     +         +                                      
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171

Query: 406 ------DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR 459
                       TG V  ++ +P  R+ +S + DA+ KLW + + +C ++  GH++ +  
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231

Query: 460 CHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
             F   G    +   D   +L+ ++    + T+   
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.7 bits (91), Expect = 6e-04
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSE 505
             ++L GH A +   H+      +VS   DG L +W   T+  V      +  +      
Sbjct: 47  TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106

Query: 506 NDHK 509
               
Sbjct: 107 PSGN 110

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.9 bits (221), Expect = 6e-20
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 46/205 (22%)

Query: 288 LASGSLDKTVKVWSTTGG--LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +A+GSLD+ V+VW +  G  ++ L+       GH+  +  V  + + + + SGSLD++VK
Sbjct: 220 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 279

Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
           +W+                         +      +  + TC  T+  H           
Sbjct: 280 LWNLQNA---------------------NNKSDSKTPNSGTCEVTYIGH----------- 307

Query: 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN- 464
                    V  V  +  D  ++S S D  +  W       L  L+GH  SV+     N 
Sbjct: 308 ------KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 361

Query: 465 -----KGTQIVSTGADGLLKLWSIK 484
                +     +   D   ++W  K
Sbjct: 362 SSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.8 bits (156), Expect = 8e-12
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 22/175 (12%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
              G  I +   D  +++W  +T   V   D             +        V+ V F+
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE----------NESGTGHKDSVYSVVFT 263

Query: 422 PLDRILISSSGDATIKLWCLTD------------YVCLKSLEGHDASVLRCHFINKGTQI 469
              + ++S S D ++KLW L +              C  +  GH   VL          I
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323

Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC 524
           +S   D  +  W  K+   +     H   + +    N            + + DC
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 378

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (151), Expect = 3e-11
 Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 42/233 (18%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
                 +    +++     + ++V       H   + CV  S + + LA+G  +KT +V+
Sbjct: 31  ALKKQTNDYYILYNPALP-REIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVY 88

Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407
             + G  L+  L       +                     S+     L I ++  + D 
Sbjct: 89  RVSDG-SLVARLSDDSAANKDPEN--------------LNTSSSPSSDLYIRSVCFSPDG 133

Query: 408 NQIITGGVWFVNFSPL-------------------------DRILISSSGDATIKLWCLT 442
             + TG    +                                 L+S SGD T+++W L 
Sbjct: 134 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 193

Query: 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
              C  +L   D           G  I +   D  +++W  +T   V   D  
Sbjct: 194 TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.4 bits (142), Expect = 4e-10
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--HEKDINCVTVSPNDKLLASGSLDKT 343
           E + SGS D+ V  W    G   L +L+GH+         N  ++ P   + A+GS D  
Sbjct: 321 EYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 379

Query: 344 VKVWS 348
            ++W 
Sbjct: 380 ARIWK 384

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (182), Expect = 3e-15
 Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 38/225 (16%)

Query: 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL 359
           W   G LK   VL    KGH+  +    +      + SGS D T+KVWS   G K L  L
Sbjct: 1   WRR-GELKSPKVL----KGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTG-KCLRTL 53

Query: 360 RGHKKGTQIVS-----------------------------TGADGLLKLWSIKTSTCVST 390
            GH  G                                   G    ++   +     VS 
Sbjct: 54  VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113

Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
                L++W +   +  + ++             R ++S + D  +K+W      CL +L
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173

Query: 451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           +GH   V    F   G  +VS   D  +++W ++T  C+ T   H
Sbjct: 174 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 216

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (158), Expect = 3e-12
 Identities = 50/211 (23%), Positives = 76/211 (36%), Gaps = 41/211 (19%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
           + SG+ D  VKVW        L+ L+GH           ++  +   + SGSLD +++VW
Sbjct: 150 VVSGAYDFMVKVWDPETE-TCLHTLQGH------TNRVYSLQFDGIHVVSGSLDTSIRVW 202

Query: 348 STTGGLKLLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399
               G   ++ L GH+        K   +VS  AD  +K+W IKT  C+ T         
Sbjct: 203 DVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 261

Query: 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-----EGHD 454
                                      +I+SS D T+KLW L     +++L      G  
Sbjct: 262 ----------------AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305

Query: 455 ASVLRCHFINKGTQIVSTGADGL----LKLW 481
             V R    N          +G     L + 
Sbjct: 306 GVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (152), Expect = 2e-11
 Identities = 33/167 (19%), Positives = 57/167 (34%), Gaps = 33/167 (19%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
            + SGSLD +++VW        +                  +   D +L SG+ D TVK+
Sbjct: 189 HVVSGSLDTSIRVWD-------VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 241

Query: 347 WSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
           W    G  L  +   +K              ++++  DG +KLW +KT   +        
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL-- 299

Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT----IKLW 439
                     E+    G VW +  S    +    S + T    + + 
Sbjct: 300 ----------ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 3e-10
 Identities = 47/214 (21%), Positives = 81/214 (37%), Gaps = 36/214 (16%)

Query: 291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT 350
           GS D T++VW    G       +              V  + + + SG+ D  VKVW   
Sbjct: 113 GSRDATLRVWDIETG-------QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 165

Query: 351 GGLKLLNVLRGHKK--------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402
                L+ L+GH          G  +VS   D  +++W ++T  C+ T   H        
Sbjct: 166 TE-TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-------- 216

Query: 403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF 462
                                D IL+S + D+T+K+W +    CL++L+G +        
Sbjct: 217 -----------QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265

Query: 463 IN-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           +      ++++  DG +KLW +KT   +      
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (126), Expect = 3e-08
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)

Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK 498
           W   +    K L+GHD  V+ C     G +IVS   D  LK+WS  T  C+ T   H   
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 499 IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
           + +S   ++    G   +     +        
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIH 91

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (165), Expect = 2e-13
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 38/223 (17%)

Query: 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK 364
           G   L  +        K + C+    +D+ + SG  D T+K+W      +   +L GH  
Sbjct: 1   GRHSLQRIHCRS-ETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTG 56

Query: 365 G-----------------------------TQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
                                                    +          V+     +
Sbjct: 57  SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116

Query: 396 LKIWTLAITKD---ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
           + +W +A   D      ++            D+ ++S+SGD TIK+W  +    +++L G
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 176

Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
           H   +    +  +   +VS  +D  ++LW I+   C+   + H
Sbjct: 177 HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 217

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 8e-11
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 43/204 (21%)

Query: 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK 354
           +++ VW           +   +           V  +DK + S S D+T+KVW+T+   +
Sbjct: 115 RSIAVWDMASP----TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC-E 169

Query: 355 LLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD 406
            +  L GHK        +   +VS  +D  ++LW I+   C+   + H            
Sbjct: 170 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH------------ 217

Query: 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCL---------TDYVCLKSLEGHDASV 457
                            ++ ++S + D  IK+W L            +CL++L  H   V
Sbjct: 218 -------EELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270

Query: 458 LRCHFINKGTQIVSTGADGLLKLW 481
            R  F     QIVS+  D  + +W
Sbjct: 271 FRLQF--DEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (139), Expect = 5e-10
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 24/157 (15%)

Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349
           S S D+T+KVW+T+   + +  L GHK+G         +   D+L+ SGS D T+++W  
Sbjct: 153 SASGDRTIKVWNTSTC-EFVRTLNGHKRG------IACLQYRDRLVVSGSSDNTIRLWDI 205

Query: 350 TGGLKL-------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402
             G  L         V        +IVS   DG +K+W +  +            + TL 
Sbjct: 206 ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC-LRTL- 263

Query: 403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
                    +G V+ + F      ++SSS D TI +W
Sbjct: 264 ------VEHSGRVFRLQFDE--FQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 3e-07
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHK----KGHEKDINCVTVSPNDKLLASGSLDKT 343
           + SG+ D  +KVW     L                H   +  +    ++  + S S D T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL--QFDEFQIVSSSHDDT 288

Query: 344 VKVW 347
           + +W
Sbjct: 289 ILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 9e-07
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 23/110 (20%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
           L+ SGS D T+++W        +      +     +     +  ++K + SG+ D  +KV
Sbjct: 190 LVVSGSSDNTIRLWD-------IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 242

Query: 347 WSTTGGL--------KLLNVLRGHKK--------GTQIVSTGADGLLKLW 380
           W     L          L  L  H            QIVS+  D  + +W
Sbjct: 243 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.2 bits (162), Expect = 1e-12
 Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 25/243 (10%)

Query: 286 ELLASGSLDKTVKVWST-TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
             +A    +  V ++         ++ L+ H       +  V  +P+   + +   D+  
Sbjct: 20  TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ----VTGVDWAPDSNRIVTCGTDRNA 75

Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
            VW+  G      ++             A    K      S  +S         W   + 
Sbjct: 76  YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW--VC 133

Query: 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLW------------------CLTDYVC 446
           K   + I   V  +++ P   +L + S D   +++                   +     
Sbjct: 134 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 193

Query: 447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSEN 506
           +         V    F   G+++     D  + L        V+T     L +       
Sbjct: 194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT 253

Query: 507 DHK 509
           +  
Sbjct: 254 ESS 256

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.5 bits (142), Expect = 3e-10
 Identities = 19/184 (10%), Positives = 48/184 (26%), Gaps = 22/184 (11%)

Query: 323 INCVTVSPNDKLLASGSLDKTVKVWST-TGGLKLLNVLRGHKK----------GTQIVST 371
           I+C   + +   +A    +  V ++         ++ L+ H              +IV+ 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

Query: 372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS 431
           G D    +W++K  T   T     +      +    N+             +      + 
Sbjct: 70  GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129

Query: 432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491
                 +                ++VL   +      + +   D   +++S         
Sbjct: 130 WWVCKHIKK-----------PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 178

Query: 492 FDKH 495
               
Sbjct: 179 PAPT 182

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.2 bits (118), Expect = 3e-07
 Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 18/223 (8%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
            + +   D+   VW+                   +   CV  +PN+K  A GS  + + +
Sbjct: 65  RIVTCGTDRNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121

Query: 347 WSTTGGLKLLNVLRGHKKGTQIVST-------------GADGLLKLWSIKTSTCVSTFDK 393
                           K     V +               D   +++S            
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181

Query: 394 HALKIWT-LAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
                         E+    G V  V FS     +   S D+T+ L      + + +L  
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 241

Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
               +L   FI +   +V+ G D    L++  ++    +F   
Sbjct: 242 ETLPLLAVTFITES-SLVAAGHDCFPVLFTYDSAAGKLSFGGR 283

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.6 bits (106), Expect = 1e-05
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 16/86 (18%)

Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK----LLA 336
             G        +LDK      +      L+        H+  ++ ++V    K       
Sbjct: 292 QRGLTARERFQNLDKKASSEGSAAAGAGLD------SLHKNSVSQISVLSGGKAKCSQFC 345

Query: 337 SGSLDKTVKVW------STTGGLKLL 356
           +  +D  + +W      S    LK++
Sbjct: 346 TTGMDGGMSIWDVRSLESALKDLKIV 371

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 41/218 (18%)

Query: 292 SLDKTVKVWSTTGGLKL-------------LNVLRGHKKGHEKDINCVTVSPNDKLLASG 338
           S D   +++S                       L          ++ V  S N   +A  
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219

Query: 339 SLDKTVKVWSTTGGLKLLNVLRGHKKGT--------QIVSTGADGLLKLWSIKTSTCVST 390
           S D TV +      + +  +                 +V+ G D    L++  ++    +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279

Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCL-TDYV-CL 447
           F           +   +     G      F  LD+      S  A   L  L  + V  +
Sbjct: 280 FGGR--------LDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQI 331

Query: 448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485
             L G  A           +Q  +TG DG + +W +++
Sbjct: 332 SVLSGGKAKC---------SQFCTTGMDGGMSIWDVRS 360

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 20/112 (17%)

Query: 286 ELLASGSLDKT-VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
            L+A+G      +  + +  G            G        +           +LDK  
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSF-------GGRLDVPKQSSQRGLTARERFQNLDKKA 308

Query: 345 KVWSTTGGLKLLNVL------------RGHKKGTQIVSTGADGLLKLWSIKT 384
               +      L+ L             G  K +Q  +TG DG + +W +++
Sbjct: 309 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (161), Expect = 1e-12
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           +   S   D  +  W T  G  +       +      +    +S +DK + +GS DK   
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGASI------FQSKESSSVLSCDISVDDKYIVTGSGDKKAT 331

Query: 346 VWS 348
           V+ 
Sbjct: 332 VYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 9e-11
 Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD 475
             + F+   +  +S+  D  +  W       +       +SVL C        IV+   D
Sbjct: 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGD 327

Query: 476 GLLKLWSI 483
               ++ +
Sbjct: 328 KKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (144), Expect = 2e-10
 Identities = 30/246 (12%), Positives = 60/246 (24%), Gaps = 37/246 (15%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
             + +G     VKVW  +       V +      +  I    + P+   L  G    T+ 
Sbjct: 64  RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122

Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS-------------------- 385
           +W        +                +      +S  +                     
Sbjct: 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182

Query: 386 ---------------TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS 430
                                D            + +    T  ++ + + P    L   
Sbjct: 183 TDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG 242

Query: 431 SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490
              + +++  +      +    H++ VL   F   G   VSTG D LL  W       + 
Sbjct: 243 MESSNVEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301

Query: 491 TFDKHA 496
              + +
Sbjct: 302 QSKESS 307

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (132), Expect = 6e-09
 Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 8/76 (10%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL--------LNVLRGHKKGT 366
               HE  +  +  +   K   S   D  +  W T  G  +        +          
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319

Query: 367 QIVSTGADGLLKLWSI 382
            IV+   D    ++ +
Sbjct: 320 YIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 1e-08
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 18/78 (23%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
              G   VSTG D LL  W       +    +                     V   + S
Sbjct: 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES------------------SSVLSCDIS 315

Query: 422 PLDRILISSSGDATIKLW 439
             D+ +++ SGD    ++
Sbjct: 316 VDDKYIVTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 5e-07
 Identities = 16/127 (12%), Positives = 31/127 (24%), Gaps = 35/127 (27%)

Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349
               D  +         ++      +   H + +  VT+S   + + +G     VKVW  
Sbjct: 27  PFPPDALIGPGIPRHARQI------NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79

Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
           +                                K+             I +  +  D   
Sbjct: 80  SHP----------------------------GNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111

Query: 410 IITGGVW 416
           +I GG  
Sbjct: 112 LIVGGEA 118

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 15/112 (13%)

Query: 371 TGADGLLKLWSI-KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429
             ADG ++       +       +HA +I TL             V  V  S      + 
Sbjct: 17  VTADGQMQPVPFPPDALIGPGIPRHARQINTLNHG--------EVVCAVTISN-PTRHVY 67

Query: 430 SSGDATIKLWCLTDYVCLKSLE-----GHDASVLRCHFINKGTQIVSTGADG 476
           + G   +K+W ++       +        D  +  C  +  G  ++  G   
Sbjct: 68  TGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.8 bits (161), Expect = 2e-12
 Identities = 35/248 (14%), Positives = 65/248 (26%), Gaps = 45/248 (18%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN------------------- 357
           K H+ DI  V+   +     S S D  +KVW                             
Sbjct: 11  KAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68

Query: 358 ---VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414
              + R   +   + +T   G L  + I             L +    + K     +   
Sbjct: 69  LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK-- 126

Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDY------------------VCLKSLEGHDAS 456
               N   L   L+++    T  +W    +                    ++S       
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186

Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ 516
                   +G  I +   +G +++  + T   +  F+     I NS+S    K       
Sbjct: 187 ATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245

Query: 517 LCSRNSDC 524
           L   +   
Sbjct: 246 LAIAHDSN 253

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.0 bits (159), Expect = 3e-12
 Identities = 35/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG-----LKLLNVLRGHKKGHEKD 322
           G+   +           + L+A+ S    +  +  T       +    +        +  
Sbjct: 62  GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS 121

Query: 323 INCVTVSPND-----KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLL 377
              +    ++       L +  +  T  +W         N L  +   T  +    +  +
Sbjct: 122 FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 181

Query: 378 KLWSIKTSTCVST---------------FDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
                 TS  +S                 +   L+      ++      +  +  V FSP
Sbjct: 182 TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 241

Query: 423 LDRILISSSGDATIKLWCLTDY----------------VCLKSLEGHDASVLRCHFINKG 466
              +L  +    +     L +                         H + V+   F + G
Sbjct: 242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 301

Query: 467 TQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
             + S G DG L+ W +KT   ++T + H
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMH 330

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.9 bits (156), Expect = 8e-12
 Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 34/211 (16%)

Query: 287 LLASGSLDKTVKVWST-TGGLKLLNVLRGHKKGHEKDINCVTV-------SPNDKLLASG 338
              S S D  +KVW       +           H+  ++ V V       +    L+A+ 
Sbjct: 26  FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 85

Query: 339 SLDKTVKVWSTTGGLKL-------LNVLRGHKKGTQI-----------------VSTGAD 374
           S    +  +  T   +        L++L    K                     V+T   
Sbjct: 86  SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 145

Query: 375 GLLKLWSI-KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD 433
           G   +W     +   ++   +      L  T +     +     V+ S    ++ +   +
Sbjct: 146 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNN 204

Query: 434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
            T+++  L+    L + E   + +   + I 
Sbjct: 205 GTVQISELSTLRPLYNFESQHSMINNSNSIR 235

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.9 bits (143), Expect = 3e-10
 Identities = 27/235 (11%), Positives = 65/235 (27%), Gaps = 34/235 (14%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHK-------------KGHEKDINCVTVSPNDKL 334
           L +  +  T  +W         N L  +                  +    V +S    L
Sbjct: 139 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGL 197

Query: 335 LASGSLDKTVKVW---------------STTGGLKLLNVLRGHKKGTQIVSTGADGLLKL 379
           +A+G  + TV++                S       +  ++   +G+ +           
Sbjct: 198 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGC 257

Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
            ++  +         ++   +   +  E    +  V  ++F+     L S+  D  ++ W
Sbjct: 258 ITLYETEFGERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFW 316

Query: 440 CLTDYVCLKSLEGHDASVLRCH----FINKGTQIVSTGADGLLKLWSIKTSTCVS 490
            +     + +L  H   +            G  +   G   +  L     S   +
Sbjct: 317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 371

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (118), Expect = 4e-07
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 7/92 (7%)

Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
            S   D  ++ W      + +  L  H    E + + + V  +   LA         V+ 
Sbjct: 305 CSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG------VFD 357

Query: 349 TTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW 380
                K      G      +     D  ++ +
Sbjct: 358 VKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 65.3 bits (157), Expect = 5e-12
 Identities = 7/185 (3%), Positives = 27/185 (14%), Gaps = 10/185 (5%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL------LNVLRGHKKGTQI 368
                           + K L   S                        V+         
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 232

Query: 369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI 428
                  +           +                    +                   
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292

Query: 429 SSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488
            +     +  + +      + +     ++           ++    DG +  + ++    
Sbjct: 293 GAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348

Query: 489 VSTFD 493
             T +
Sbjct: 349 ERTVE 353

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 58.0 bits (138), Expect = 9e-10
 Identities = 15/158 (9%), Positives = 33/158 (20%), Gaps = 13/158 (8%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--GHEKDINCVTVSPNDKLLASGSLDKTV 344
            L   S                  V+             N   + P      +G  D   
Sbjct: 192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLND 251

Query: 345 K---VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL 401
                           ++   +    I S    G    +           +K  L  + +
Sbjct: 252 MYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY------YQGAPEKGVLLKYDV 305

Query: 402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
                +   +   +  +  S   + ++    D  I  +
Sbjct: 306 K--TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 54.9 bits (130), Expect = 1e-08
 Identities = 4/75 (5%), Positives = 15/75 (20%), Gaps = 9/75 (12%)

Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
               G              +  +                   + ++  + +S + K +  
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKTR---------KVTEVKNNLTDLRLSADRKTVMV 331

Query: 338 GSLDKTVKVWSTTGG 352
              D  +  +     
Sbjct: 332 RKDDGKIYTFPLEKP 346

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 15/118 (12%), Positives = 27/118 (22%), Gaps = 4/118 (3%)

Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474
            +  +FSPLD  LI+        +  ++    LK        +               G 
Sbjct: 5   KFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGT 62

Query: 475 DG--LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
                L ++  +T       +            N         +      D E     
Sbjct: 63  REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 120

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.8 bits (153), Expect = 1e-11
 Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 8/156 (5%)

Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
           +GH   +    +   D  + +G+ DK ++V+ +    K L  L GH  G   +     G+
Sbjct: 9   RGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINK-KFLLQLSGHDGGVWALKYAHGGI 66

Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436
           L       S       +             E    T     +      + +++ S D T+
Sbjct: 67  L------VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120

Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
            +W L     +          L  H   +    V  
Sbjct: 121 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 156

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (138), Expect = 9e-10
 Identities = 37/259 (14%), Positives = 82/259 (31%), Gaps = 19/259 (7%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
             + +G+ DK ++V+ +    K L  L GH  G    +  +  +    L++  +      
Sbjct: 24  NYVITGADDKMIRVYDSINK-KFLLQLSGHDGG----VWALKYAHGGILVSGSTDRTVRV 78

Query: 346 VWSTTGGL----------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
                G                 +  +K    IV+   D  L +W +   + V    +  
Sbjct: 79  WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138

Query: 396 LKIWTLAITKDENQIITGGVWFVN----FSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451
                    ++    +      +      S    I++S S D T+ +W +    CL  L 
Sbjct: 139 DYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198

Query: 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF 511
           GH   +    + ++  + +S   D  +++W ++    + T   H   +      +     
Sbjct: 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS 258

Query: 512 GLPRQLCSRNSDCEYRGGW 530
                        +Y   +
Sbjct: 259 AAADGSIRGWDANDYSRKF 277

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.1 bits (133), Expect = 4e-09
 Identities = 19/183 (10%), Positives = 46/183 (25%), Gaps = 27/183 (14%)

Query: 358 VLRGHKK---------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408
            LRGH              +++   D +++++       +     H              
Sbjct: 7   TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGH-------------- 52

Query: 409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQ 468
               GGVW + ++    ++  S+                     +           K  +
Sbjct: 53  ---DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK 109

Query: 469 I-VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527
             V+   D  L +W +   + V    +         +  ++  F    +    +      
Sbjct: 110 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 169

Query: 528 GGW 530
            G 
Sbjct: 170 HGN 172

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.2 bits (123), Expect = 6e-08
 Identities = 11/108 (10%), Positives = 32/108 (29%), Gaps = 2/108 (1%)

Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
             +     VS     +++ W       +       +  +    +   ++ S  +    ++
Sbjct: 249 LRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIY 308

Query: 440 CLTDYVCLKS-LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486
            L     + + +      +   +F    T + +   DG   L  +  S
Sbjct: 309 NLRSGKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEILDFS 355

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (116), Expect = 5e-07
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
           +L SGS +    +++   G     ++  +       I  V       L+A+   D    +
Sbjct: 296 ILVSGS-ENQFNIYNLRSG----KLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFL 349

Query: 347 W 347
            
Sbjct: 350 E 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 10/80 (12%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--------- 365
               H       T   +D +L SGS +    +++   G  +   +               
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK 335

Query: 366 TQIVSTGADGLLKLWSIKTS 385
           T + +   DG   L  +  S
Sbjct: 336 TLVAAVEKDGQSFLEILDFS 355

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 19/76 (25%)

Query: 365 GTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIWTLAITKDENQIITGGVWFVNFSPL 423
              I+ +G++    ++++++   V +   K                     +W VNF   
Sbjct: 293 SDNILVSGSENQFNIYNLRSGKLVHANILKD-----------------ADQIWSVNFKG- 334

Query: 424 DRILISSSGDATIKLW 439
             ++ +   D    L 
Sbjct: 335 KTLVAAVEKDGQSFLE 350

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 59.2 bits (141), Expect = 3e-10
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 4/93 (4%)

Query: 307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGT 366
            +  V  GH K     I  ++ S + K L S   +  +  W  + G+        H    
Sbjct: 3   SIDQVRYGHNKA----ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 58

Query: 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399
             + T + G L   S      V       +   
Sbjct: 59  TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSS 91

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.3 bits (123), Expect = 5e-08
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
           A+GSLD +V VW+         +++G    H        +  N+  + S   D  +K W+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKG---AHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.2 bits (115), Expect = 5e-07
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTG 473
             V++SP +  L + S D ++ +W +       +     H  S +        T IVS G
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287

Query: 474 ADGLLKLWSI 483
            D  +K W++
Sbjct: 288 QDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.4 bits (113), Expect = 8e-07
 Identities = 10/50 (20%), Positives = 17/50 (34%)

Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
             +   GH+ ++        G  + S  A+G +  W I T      F   
Sbjct: 4   IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.1 bits (112), Expect = 1e-06
 Identities = 12/119 (10%), Positives = 30/119 (25%), Gaps = 4/119 (3%)

Query: 412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVS 471
              +  ++ S   + L S+  +  I  W ++  +  +      A+++          + +
Sbjct: 12  NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71

Query: 472 TGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
              D  LK+     S      D          S+           +             
Sbjct: 72  VSWDDHLKVVPAGGSGV----DSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 6e-05
 Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 15/81 (18%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
                ++ +   D  + +W++   +      K A                          
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA---------------HAMSSVNSVIW 277

Query: 422 PLDRILISSSGDATIKLWCLT 442
             +  ++S+  D+ IK W + 
Sbjct: 278 LNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 7e-05
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 11/79 (13%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST-TGGLKLLNVLRGHKK--------- 364
               H   + CV+ SP++  LA+GSLD +V VW+        + +   H           
Sbjct: 219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 278

Query: 365 -GTQIVSTGADGLLKLWSI 382
             T IVS G D  +K W++
Sbjct: 279 NETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.8 bits (88), Expect = 0.001
 Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 4/69 (5%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           + L S   +  +  W  + G     V       H   I  +  +    L      D    
Sbjct: 25  KTLFSADAEGHINSWDISTG-ISNRVFP---DVHATMITGIKTTSKGDLFTVSWDDHLKV 80

Query: 346 VWSTTGGLK 354
           V +   G+ 
Sbjct: 81  VPAGGSGVD 89

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.2 bits (141), Expect = 3e-10
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
           A+GSLD  + ++S    +K++  L  HK G    +N +        L S   D  +K W+
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNAHKDG----VNNLLWETPST-LVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.6 bits (129), Expect = 9e-09
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
                   + + +    +        +                 + ++ + S D  I ++
Sbjct: 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242

Query: 440 CL-TDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483
            +      +K+L  H   V    +    T +VS+GAD  +K W++
Sbjct: 243 SVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.9 bits (122), Expect = 7e-08
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--------- 365
                  +         + L+A+GSLD  + ++S    +K++  L  HK G         
Sbjct: 210 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 269

Query: 366 TQIVSTGADGLLKLWSI 382
           + +VS+GAD  +K W++
Sbjct: 270 STLVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.2 bits (115), Expect = 4e-07
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 8/51 (15%)

Query: 304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK 354
           G  ++L  + GH KG    I  +TV+P    L SGS D  +  WS++   +
Sbjct: 1   GHDEVLKTISGHNKG----ITALTVNP----LISGSYDGRIMEWSSSSMHQ 43

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.3 bits (105), Expect = 9e-06
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 19/79 (24%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF 420
             +   + +   D  + ++S+K     +   + H                   GV  + +
Sbjct: 224 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH-----------------KDGVNNLLW 266

Query: 421 SPLDRILISSSGDATIKLW 439
                 L+SS  DA IK W
Sbjct: 267 ET-PSTLVSSGADACIKRW 284

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (90), Expect = 6e-04
 Identities = 30/258 (11%), Positives = 64/258 (24%), Gaps = 46/258 (17%)

Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
           L SGS D  +  WS++             + H   I  +  S   +  +    D      
Sbjct: 24  LISGSYDGRIMEWSSSSMH----------QDHSNLIVSLDNSKAQEYSSISWDDTLKVNG 73

Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV------------------- 388
            T         +              D  L +    T   +                   
Sbjct: 74  ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV 133

Query: 389 -----STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD 443
                        K+  L ++ D    +     +++ SP +  + +      I L+ L  
Sbjct: 134 AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS 193

Query: 444 -----------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS-TCVST 491
                         + ++    A         +   + +   D  + ++S+K     +  
Sbjct: 194 REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 253

Query: 492 FDKHALKIRNSDSENDHK 509
            + H   + N   E    
Sbjct: 254 LNAHKDGVNNLLWETPST 271

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (86), Expect = 0.002
 Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 9/56 (16%)

Query: 412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT 467
             G+  +  +PL    IS S D  I  W  +        + H   ++         
Sbjct: 13  NKGITALTVNPL----ISGSYDGRIMEWSSS-----SMHQDHSNLIVSLDNSKAQE 59

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 11/76 (14%)

Query: 351 GGLKLLNVLRGHKKG------TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
           G  ++L  + GH KG        ++S   DG +  WS  +         H+  I +L  +
Sbjct: 1   GHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNS 55

Query: 405 KDENQIITGGVWFVNF 420
           K +          +  
Sbjct: 56  KAQEYSSISWDDTLKV 71

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.8 bits (140), Expect = 5e-10
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
             +AS S DKT+K+W+     K+   +         +   + +    + L S S +  + 
Sbjct: 251 TKIASASADKTIKIWNVATL-KVEKTIPVG---TRIEDQQLGIIWTKQALVSISANGFIN 306

Query: 346 VW 347
             
Sbjct: 307 FV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.4 bits (126), Expect = 3e-08
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASV 457
                   +N   +G V+ + +SP    + S+S D TIK+W +      K++        
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284

Query: 458 LRCHFINKGTQIVSTGADGLLKLW 481
            +   I     +VS  A+G +   
Sbjct: 285 QQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.3 bits (118), Expect = 3e-07
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 16/78 (20%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
              GT+I S  AD  +K+W++ T     T                           +   
Sbjct: 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGT----------------RIEDQQLGII 290

Query: 422 PLDRILISSSGDATIKLW 439
              + L+S S +  I   
Sbjct: 291 WTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.3 bits (118), Expect = 3e-07
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 12/73 (16%)

Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----------GTQ 367
           H   +  +T SP+   +AS S DKT+K+W+     K+   +    +              
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIEDQQLGIIWTKQA 295

Query: 368 IVSTGADGLLKLW 380
           +VS  A+G +   
Sbjct: 296 LVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 45.7 bits (106), Expect = 8e-06
 Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 6/62 (9%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
           + +   +   +V             +   H             SP+    ASG +   V+
Sbjct: 30  DKIQYCN-GTSVYTVPVGSL-TDTEIYTEHSHQ----TTVAKTSPSGYYCASGDVHGNVR 83

Query: 346 VW 347
           +W
Sbjct: 84  IW 85

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.0 bits (99), Expect = 5e-05
 Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)

Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
           G    +  +P    +   +G  ++    +      +    H            G    S 
Sbjct: 18  GTAVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76

Query: 473 GADGLLKLWSIKTSTC 488
              G +++W    +T 
Sbjct: 77  DVHGNVRIWDTTQTTH 92

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.8 bits (96), Expect = 1e-04
 Identities = 11/89 (12%), Positives = 21/89 (23%), Gaps = 18/89 (20%)

Query: 358 VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF 417
           VL     G +I        +    + + T    + +H                 +     
Sbjct: 22  VLGNTPAGDKIQY-CNGTSVYTVPVGSLTDTEIYTEH-----------------SHQTTV 63

Query: 418 VNFSPLDRILISSSGDATIKLWCLTDYVC 446
              SP      S      +++W  T    
Sbjct: 64  AKTSPSGYYCASGDVHGNVRIWDTTQTTH 92

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 28/211 (13%), Positives = 56/211 (26%), Gaps = 5/211 (2%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL--ASGSLDKTV 344
             ASG +   V++W TT      ++L+         +  ++     K +       ++  
Sbjct: 72  YCASGDVHGNVRIWDTTQTT---HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 128

Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
            V+    G    N+    +    +    +     +     +T             T    
Sbjct: 129 HVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 188

Query: 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
                 +        F+           +                   H  SV    +  
Sbjct: 189 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 248

Query: 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
            GT+I S  AD  +K+W++ T     T    
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVG 279

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (137), Expect = 1e-09
 Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 22/134 (16%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------KGHEKDINCVTVSPNDKLL 335
           E  A  S+D  V V          N  +                   +N +  SP  K L
Sbjct: 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266

Query: 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIVSTGADGLLKLWSIKTSTC 387
            +   D  +  W+     K+ N  + ++            +    +D   K  +      
Sbjct: 267 YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA----I 322

Query: 388 VSTFDKHALKIWTL 401
             T + +A  I+ +
Sbjct: 323 DQTIELNASSIYII 336

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.9 bits (130), Expect = 8e-09
 Identities = 15/193 (7%), Positives = 50/193 (25%), Gaps = 7/193 (3%)

Query: 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR--GHK 363
           ++++ + +  K      I+ + + P+  LL   S D ++ V+      K +++L+   +K
Sbjct: 1   MQIVQIEQAPKDY----ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK 56

Query: 364 KG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
                        L           +      +     L   +    I     +  +   
Sbjct: 57  HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLI 116

Query: 423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
                                 V   +                 ++++    +  ++ + 
Sbjct: 117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR 176

Query: 483 IKTSTCVSTFDKH 495
           +      +   + 
Sbjct: 177 LPLCEDDNGTIEE 189

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.9 bits (125), Expect = 3e-08
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
            K+      +  DG + +             K           KD N      V  + FS
Sbjct: 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA--YPVNSIEFS 260

Query: 422 PLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481
           P  + L ++  D  I  W L     +K+    +   +          +    +D   K  
Sbjct: 261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK-IACSDNILCLATSDDTFKTN 319

Query: 482 SIKTSTCVSTFDKHALKI 499
           +        T + +A  I
Sbjct: 320 AA----IDQTIELNASSI 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 9e-08
 Identities = 26/250 (10%), Positives = 56/250 (22%), Gaps = 7/250 (2%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
            LL   S D ++ V+      K +++L      ++  + C     N  L       +   
Sbjct: 24  SLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81

Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
           +     G      L  ++    I      G  KL +      +   D        +A+  
Sbjct: 82  LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN 141

Query: 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA----SVLRCH 461
             +                  LI    ++ ++ + L                        
Sbjct: 142 LNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201

Query: 462 FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN 521
              +      +  DG + +             K     R             P      +
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF-AFRCHRLNLKDTNLAYPVNSIEFS 260

Query: 522 SDCEYRGGWS 531
              ++     
Sbjct: 261 PRHKFLYTAG 270

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (134), Expect = 3e-09
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTV 344
           +  A+   D T++VW  T   K +          +     V V    +  + S SLD T+
Sbjct: 264 QKFATVGADATIRVWDVTTS-KCVQKWTLD--KQQLGNQQVGVVATGNGRIISLSLDGTL 320

Query: 345 KVW 347
             +
Sbjct: 321 NFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.6 bits (124), Expect = 5e-08
 Identities = 26/229 (11%), Positives = 61/229 (26%), Gaps = 5/229 (2%)

Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGL---KLLNVLRGHKKGHEKDINCVTVSPNDKL 334
            F      + L SG     V VW  T       +   ++   +     I+ ++     + 
Sbjct: 70  KFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR 129

Query: 335 LASGSL--DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392
           L       D      S   G  L  V    ++        +  +  +      + V    
Sbjct: 130 LCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 189

Query: 393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
                  +      +   +    +  +       + S    +            ++  + 
Sbjct: 190 PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE 249

Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRN 501
                +         +  + GAD  +++W + TS CV  +     ++ N
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASV----LRCHFINKGTQIVSTGADGLLK 479
            +   +   DATI++W +T   C++        +    +         +I+S   DG L 
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLN 321

Query: 480 LWSI 483
            + +
Sbjct: 322 FYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 16/79 (20%)

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
                +  + GAD  +++W + TS CV  +     ++                   V   
Sbjct: 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG---------------NQQVGVV 304

Query: 422 PL-DRILISSSGDATIKLW 439
              +  +IS S D T+  +
Sbjct: 305 ATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 2e-05
 Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 14/81 (17%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------- 363
             +   +         + +  A+   D T++VW  T   K +      K           
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVV 304

Query: 364 --KGTQIVSTGADGLLKLWSI 382
                +I+S   DG L  + +
Sbjct: 305 ATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.1 bits (94), Expect = 3e-04
 Identities = 20/184 (10%), Positives = 46/184 (25%), Gaps = 26/184 (14%)

Query: 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT-VKVW-STTGGLKLLNVLRGHK 363
           + L  ++             ++  P    +A        V+        +  +    GH 
Sbjct: 3   ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG 62

Query: 364 K-------------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
                            + S    G + +W        ++ + +          K E Q+
Sbjct: 63  SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN---------VKSEFQV 113

Query: 411 ITGGVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQ 468
           + G +  +++        ++    D             L  + GH   +  CH       
Sbjct: 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173

Query: 469 IVST 472
              T
Sbjct: 174 RSMT 177

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 0.003
 Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 6/89 (6%)

Query: 413 GGVWFVNFSPLDRILISSSGDAT-IKLWCLTD--YVCLKSLEGHDASVLRC---HFINKG 466
                +++ P    +    G +  ++     D     +    GH +SV+       I   
Sbjct: 18  NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77

Query: 467 TQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
             + S    G + +W        ++ + +
Sbjct: 78  QYLCSGDESGKVIVWGWTFDKESNSVEVN 106

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 55.8 bits (133), Expect = 5e-09
 Identities = 17/268 (6%), Positives = 53/268 (19%), Gaps = 24/268 (8%)

Query: 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG- 305
                    L         L  +        A  +       A G     V+V+      
Sbjct: 50  VSCAGCGVTLGHSLGAFLSL-AVAGHSGSDFALASTSF-ARSAKGKRTDYVEVFDPVTFL 107

Query: 306 -LKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHK 363
            +  + +    +      ++ +    +   LL            S  G      + +   
Sbjct: 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGA-SDDQLTKSAS 166

Query: 364 -------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416
                               L    +  +                 +             
Sbjct: 167 CFHIHPGAAATHYLGSCPASLAASDLAAAP-----------AAAGIVGAQCTGAQNCSSQ 215

Query: 417 FVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476
               +    ++ + +                 +++G+++     +F + G Q+V+   + 
Sbjct: 216 AAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275

Query: 477 LLKLWSIKTSTCVSTFDKHALKIRNSDS 504
              +      +              +  
Sbjct: 276 DGIMILTVEHSRSCLAAAENTSSVTASV 303

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.2 bits (103), Expect = 3e-05
 Identities = 14/190 (7%), Positives = 36/190 (18%), Gaps = 12/190 (6%)

Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
             + G                            V                 +    L+ +
Sbjct: 169 HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA 228

Query: 338 GSLDKTVKVWSTTGGLKLLNV---------LRGHKKGTQIVSTGADGLLKLWSIKTSTCV 388
            +           G      +               G Q+V+   +    +      +  
Sbjct: 229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS 288

Query: 389 STFDKHALKIWTLAITKDENQIITGG-VWFVNFSPLDR--ILISSSGDATIKLWCLTDYV 445
                      T ++ +    I  G     +  +         +S+G   + ++      
Sbjct: 289 CLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348

Query: 446 CLKSLEGHDA 455
              S+E    
Sbjct: 349 DQSSVELDKG 358

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 52.4 bits (124), Expect = 5e-08
 Identities = 17/182 (9%), Positives = 40/182 (21%), Gaps = 13/182 (7%)

Query: 326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-GHKKGTQIVSTGADGLLKLWSIKT 384
             +    + +   +    + V        +        K G        D          
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60

Query: 385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY 444
              +   D    K    A        +   ++    SP  + + ++              
Sbjct: 61  YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120

Query: 445 VCLKSL----EGHDASVLRCHFINKGTQIVSTGADGLL-------KLWSIKTSTCVSTFD 493
                +    +G +A  +R   + +   ++    DG L           +KT        
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180

Query: 494 KH 495
             
Sbjct: 181 LR 182

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 26/209 (12%), Positives = 52/209 (24%), Gaps = 12/209 (5%)

Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK-VW 347
           A G   K V+ +     + L+                       K   +  L    +  +
Sbjct: 130 ADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGY 189

Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407
           S    L          + + + +         +        +    +      L   K  
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIAR------FKDDKQDPATADLLYGYLSVDLKTGKTH 243

Query: 408 NQIITGG---VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
            Q         +    SP D   I    +  +  + L     +K+    D +     F  
Sbjct: 244 TQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFDK 301

Query: 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFD 493
           KG ++   G    L +++  T   V    
Sbjct: 302 KGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 12/160 (7%), Positives = 29/160 (18%), Gaps = 12/160 (7%)

Query: 299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV 358
            +S    L          +             + +  A+  L           G      
Sbjct: 188 GYSAPDVLYFWPHQSPRHEFSMLYT-IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 246

Query: 359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG-VWF 417
                +                             + L  + L   K           + 
Sbjct: 247 FADLTELYFTGLRSPKDPN----------QIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296

Query: 418 VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV 457
           V F      L        + ++       +K+++     +
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 52.1 bits (123), Expect = 7e-08
 Identities = 24/199 (12%), Positives = 51/199 (25%), Gaps = 15/199 (7%)

Query: 270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS 329
            +   +    +                 KV   T G   +          E  IN    S
Sbjct: 144 MLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 203

Query: 330 PNDKLLASGSLDKTVKVWS-TTGGLKLLNVLRGHKKGT----------QIVSTGADG-LL 377
                L   +    +     ++G  K L  +    +            Q V+       +
Sbjct: 204 QKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 263

Query: 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG-VWFVNFSPLDR--ILISSSGDA 434
            L   +            + +      +   +   G  +  +N S  ++  +   S+GD 
Sbjct: 264 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323

Query: 435 TIKLWCLTDYVCLKSLEGH 453
           T+ +        L+S+   
Sbjct: 324 TLYIHDAESGEELRSVNQL 342

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 50.9 bits (120), Expect = 2e-07
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-- 333
              +      +     +  + V V     G +L     GH      +I+ + VS ++K  
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH------EIDSINVSQDEKPL 314

Query: 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG 375
           L A  + DKT+ +     G + L  +     G Q+++T   G
Sbjct: 315 LYALSTGDKTLYIHDAESG-EELRSVNQLGHGPQVITTADMG 355

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.6 bits (114), Expect = 9e-07
 Identities = 20/220 (9%), Positives = 52/220 (23%), Gaps = 14/220 (6%)

Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTV 344
           + + + +    + V  T     +  V+     G         V+P  +   A+ +  +++
Sbjct: 2   DYILAPARPDKLVVIDTEKM-AVDKVITIADAGPT--PMVPMVAPGGRIAYATVNKSESL 58

Query: 345 KVWSTTGGLKL----LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT 400
                  G  L    L+      K     +   DG              T  +       
Sbjct: 59  VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118

Query: 401 LAITKDENQI----ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
           L   +  ++         +  + ++     L     D  +          ++        
Sbjct: 119 LYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQSWE 176

Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 496
                  +         + G++          +   D  A
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.7 bits (109), Expect = 4e-06
 Identities = 19/193 (9%), Positives = 47/193 (24%), Gaps = 17/193 (8%)

Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV-------------LRG 361
                 + I  +  + +   L     D  V        ++   +             L  
Sbjct: 129 KAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188

Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG-GVWFVNF 420
             +                 I  +   +      L    L   +   + +    V++ + 
Sbjct: 189 WNQHESSGVMATPFYTARKDIDPADPTAYR--TGLLTMDLETGEMAMREVRIMDVFYFST 246

Query: 421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL 480
           +       +      ++ + L     +K +     S    +    G+ +   GA G L  
Sbjct: 247 AVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAA 305

Query: 481 WSIKTSTCVSTFD 493
           +  +T       D
Sbjct: 306 YDAETLEKKGQVD 318

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.3 bits (108), Expect = 5e-06
 Identities = 31/357 (8%), Positives = 79/357 (22%), Gaps = 29/357 (8%)

Query: 17  EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK 76
           ++ +   R   L   D       +     ++  T  V  ++        G+       + 
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG------GRIAYATVNKS 55

Query: 77  SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPN 136
             L   +    + L +  LS+P        VK ++    +    +L    S   LE    
Sbjct: 56  ESLVKIDLVTGETLGRIDLSTP-----EERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110

Query: 137 KILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK 196
           ++   R             A        ++  + +                   +     
Sbjct: 111 EVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG----------SKLYGLGRDLHVMD 160

Query: 197 TFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP-STLEE 255
                L       S + +   +                 T            +P +    
Sbjct: 161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220

Query: 256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315
           L         +    V   +   F T        +      ++ +       +       
Sbjct: 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASI------K 274

Query: 316 KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG 372
           +         V VS +   +  G     +  +      +    +      +  +++ 
Sbjct: 275 RVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL-EKKGQVDLPGNASMSLASV 330

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.8 bits (91), Expect = 6e-04
 Identities = 20/231 (8%), Positives = 56/231 (24%), Gaps = 25/231 (10%)

Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
             A+ +  +++       G  L  +     +   K +    +SP+ K LA       +++
Sbjct: 48  AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107

Query: 347 WSTTGGLKLLNV--------------------LRGHKKGTQIVSTGADGLLKLWS----I 382
                    + +                    L   + G+++   G D  +        +
Sbjct: 108 THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV 167

Query: 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442
           +     S   +   +   LA+             F            ++    +    L 
Sbjct: 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227

Query: 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493
                               +N            +L+ + ++ +  +    
Sbjct: 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVP 277

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 41.4 bits (95), Expect = 1e-04
 Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 7/64 (10%)

Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWS 348
           + S    + V   T   K+   +               +SP+   +  + +    V +  
Sbjct: 7   ANSESDNISVIDVTSN-KVTATIPVGSNPM-----GAVISPDGTKVYVANAHSNDVSIID 60

Query: 349 TTGG 352
           T   
Sbjct: 61  TATN 64

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 36.8 bits (83), Expect = 0.004
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 6/54 (11%)

Query: 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG 352
              TG  K+   +         D   + V+P+ K +  + S   TV V  T   
Sbjct: 228 MIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	537
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.98
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.95
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.93
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.9
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.9
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.9
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.9
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.88
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.85
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.84
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.82
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.79
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.77
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.7
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.66
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.57
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.56
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.56
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.55
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.52
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.05
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.03
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.02
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.0
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.98
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.97
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.92
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.85
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.82
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.81
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.81
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.74
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.73
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.61
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.55
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.42
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.17
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.07
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.98
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.95
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.94
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.86
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.85
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.69
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.63
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.56
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.5
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.5
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.4
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.4
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.01
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.96
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.69
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.58
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.49
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.4
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.07
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.34
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.75
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	93.29
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	93.11
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	92.33
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	91.9
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.02
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	89.82
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	85.78
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	85.52
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	80.98
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	80.2

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-39  Score=300.35  Aligned_cols=303  Identities=23%  Similarity=0.325  Sum_probs=243.3

Q ss_pred             ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      .....+.+| +.|++++|+|++++||+|+.|++|+|||+.+           ++++..+.+|...|.+++|+ +++..++
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~-----------~~~~~~~~~h~~~V~~~~~~-~~~~~~~   75 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-----------GDFERTLKGHTDSVQDISFD-HSGKLLA   75 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT-----------CCCCEEECCCSSCEEEEEEC-TTSSEEE
T ss_pred             CccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CCEEEEEeCCCCcEEEEeee-ccccccc
Confidence            344556655 6899999999999999999999999999998           78889999999999999999 6777777


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFP  244 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~  244 (537)
                      .+.....    +                 ..|+.       ......  +.     +|  ...+.++   .++|+++.++
T Consensus        76 ~~~~~~~----~-----------------~~~~~-------~~~~~~~~~~-----~~--~~~~~~~---~~~~~~~~~~  117 (317)
T d1vyhc1          76 SCSADMT----I-----------------KLWDF-------QGFECIRTMH-----GH--DHNVSSV---SIMPNGDHIV  117 (317)
T ss_dssp             EEETTSC----C-----------------CEEET-------TSSCEEECCC-----CC--SSCEEEE---EECSSSSEEE
T ss_pred             ccccccc----c-----------------ccccc-------cccccccccc-----cc--cccceee---eccCCCceEE
Confidence            7666655    6                 66665       444433  55     78  8889999   8999998888


Q ss_pred             eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        245 RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       245 ~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      +++.|+.++  +|++..                                           +..     ...+..|...+.
T Consensus       118 ~~~~d~~~~--~~~~~~-------------------------------------------~~~-----~~~~~~~~~~~~  147 (317)
T d1vyhc1         118 SASRDKTIK--MWEVQT-------------------------------------------GYC-----VKTFTGHREWVR  147 (317)
T ss_dssp             EEETTSEEE--EEETTT-------------------------------------------CCE-----EEEEECCSSCEE
T ss_pred             eeccCccee--Eeeccc-------------------------------------------cee-----eeEEccCCCcce
Confidence            888877777  776655                                           222     122346778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +++|+|++++|++++.|+.|++|++. .......+.                                .+...+..+.++
T Consensus       148 ~~~~~~~~~~l~~~~~d~~v~~~~~~-~~~~~~~~~--------------------------------~~~~~i~~~~~~  194 (317)
T d1vyhc1         148 MVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAELR--------------------------------EHRHVVECISWA  194 (317)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEEC--------------------------------CCSSCEEEEEEC
T ss_pred             eeecccCCCEEEEEeCCCeEEEEeec-cceeeEEEe--------------------------------cCCCCceEEEEe
Confidence            99999999999999999999999988 444444443                                334445555555


Q ss_pred             cCCCceEEe---eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        405 KDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       405 ~~~~~~~~~---~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                      |+.......   ......+...+.++++++.|+.|++||+.+++++..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  274 (317)
T d1vyhc1         195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW  274 (317)
T ss_dssp             CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEE
T ss_pred             eccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEE
Confidence            554433211   23344455678899999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        482 SIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       482 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+.+++++..+.+|...|           +++   +|+|++++|++++.||+|+||
T Consensus       275 d~~~~~~~~~~~~h~~~V-----------~~~---~~s~~~~~l~s~s~Dg~i~iW  316 (317)
T d1vyhc1         275 DYKNKRCMKTLNAHEHFV-----------TSL---DFHKTAPYVVTGSVDQTVKVW  316 (317)
T ss_dssp             CCTTSCCCEEEECCSSCE-----------EEE---EECSSSSCEEEEETTSEEEEE
T ss_pred             ECCCCcEEEEEcCCCCCE-----------EEE---EEcCCCCEEEEEeCCCeEEEe
Confidence            999999999999999999           999   999999999999999999999

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-39  Score=299.83  Aligned_cols=289  Identities=14%  Similarity=0.191  Sum_probs=235.4

Q ss_pred             ceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                      ..+.+..+.+.+.|.+++|+|+|++||+|+ ||.|+|||+.+....      .........+|.+.|.+++|+ |++++|
T Consensus        41 ~~~~~~~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~------~~~~~~~~~~h~~~I~~v~~s-~dg~~l  112 (337)
T d1gxra_          41 HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK------SPVSQLDCLNRDNYIRSCKLL-PDGCTL  112 (337)
T ss_dssp             EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC------SCSEEEECSCTTSBEEEEEEC-TTSSEE
T ss_pred             CceEEEECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccc------ceeEEeeecCCCCcEEEEEEc-CCCCEE
Confidence            445667777778999999999999999987 799999999873211      012233445788899999999 788889


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCcccCCC
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVKEED  241 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~~~~  241 (537)
                      ++++.++.    |                 ++||+       ......    +.     +|  ...+.++   +|+|++.
T Consensus       113 ~s~~~dg~----i-----------------~iwd~-------~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~  154 (337)
T d1gxra_         113 IVGGEAST----L-----------------SIWDL-------AAPTPRIKAELT-----SS--APACYAL---AISPDSK  154 (337)
T ss_dssp             EEEESSSE----E-----------------EEEEC-------CCC--EEEEEEE-----CS--SSCEEEE---EECTTSS
T ss_pred             EEeecccc----c-----------------ccccc-------cccccccccccc-----cc--ccccccc---ccccccc
Confidence            88888777    9                 99998       543322    55     88  8899999   9999999


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                      ++++++.|+.++  +|++...                                           +.     ......|..
T Consensus       155 ~l~s~~~d~~i~--~~~~~~~-------------------------------------------~~-----~~~~~~~~~  184 (337)
T d1gxra_         155 VCFSCCSDGNIA--VWDLHNQ-------------------------------------------TL-----VRQFQGHTD  184 (337)
T ss_dssp             EEEEEETTSCEE--EEETTTT-------------------------------------------EE-----EEEECCCSS
T ss_pred             cccccccccccc--ccccccc-------------------------------------------cc-----ccccccccc
Confidence            888888888887  7776652                                           11     112346778


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL  401 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  401 (537)
                      .|.+++|+++++.+++++.|+.+++||++ ..+.+..+. +..                                     
T Consensus       185 ~v~~l~~s~~~~~~~~~~~d~~v~i~d~~-~~~~~~~~~-~~~-------------------------------------  225 (337)
T d1gxra_         185 GASCIDISNDGTKLWTGGLDNTVRSWDLR-EGRQLQQHD-FTS-------------------------------------  225 (337)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEE-CSS-------------------------------------
T ss_pred             ccccccccccccccccccccccccccccc-cceeecccc-ccc-------------------------------------
Confidence            89999999999999999999999999998 444433322 111                                     


Q ss_pred             EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942        402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW  481 (537)
Q Consensus       402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw  481 (537)
                                  .|.+++|+|++++|++++.|+.+++||+.+++.. ....|...|++++|+|++++|++++.||.|++|
T Consensus       226 ------------~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iw  292 (337)
T d1gxra_         226 ------------QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW  292 (337)
T ss_dssp             ------------CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ------------ceEEEEEcccccccceeccccccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEE
Confidence                        7888999999999999999999999999987765 456699999999999999999999999999999


Q ss_pred             ECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        482 SIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       482 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+.+++.+..+. |...|           .++   +|+|++++|++++.||+|+||
T Consensus       293 d~~~~~~~~~~~-~~~~v-----------~~~---~~s~d~~~l~t~s~D~~I~vW  333 (337)
T d1gxra_         293 RTPYGASIFQSK-ESSSV-----------LSC---DISVDDKYIVTGSGDKKATVY  333 (337)
T ss_dssp             ETTTCCEEEEEE-CSSCE-----------EEE---EECTTSCEEEEEETTSCEEEE
T ss_pred             ECCCCCEEEEcc-CCCCE-----------EEE---EEeCCCCEEEEEeCCCeEEEE
Confidence            999999887764 66788           888   999999999999999999999

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-38  Score=289.01  Aligned_cols=283  Identities=17%  Similarity=0.151  Sum_probs=228.8

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      +.+..++++|+|+.||.++ ++.|.+||+++           ....+.+.+|.+.|++++|+ |++++|++++.++.   
T Consensus        18 ~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~-----------~~~~~~~~~H~~~v~~~~~s-p~g~~latg~~dg~---   81 (311)
T d1nr0a1          18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-----------LTDTEIYTEHSHQTTVAKTS-PSGYYCASGDVHGN---   81 (311)
T ss_dssp             TCCCCCEECTTSSEEEEEE-TTEEEEEETTC-----------SSCCEEECCCSSCEEEEEEC-TTSSEEEEEETTSE---
T ss_pred             CCeEEEEEcCCCCEEEEEe-CCEEEEEECCC-----------CceeEEEcCCCCCEEEEEEe-CCCCeEeccccCce---
Confidence            4567789999999999886 46799999998           67788899999999999999 78899988888777   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecc
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEEL  256 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~i  256 (537)
                       |                 ++||+       ......+. ..+.+|  ..+|.++   +|+|+++++++++.+..     
T Consensus        82 -i-----------------~iwd~-------~~~~~~~~-~~~~~~--~~~v~~v---~~s~d~~~l~~~~~~~~-----  125 (311)
T d1nr0a1          82 -V-----------------RIWDT-------TQTTHILK-TTIPVF--SGPVKDI---SWDSESKRIAAVGEGRE-----  125 (311)
T ss_dssp             -E-----------------EEEES-------SSTTCCEE-EEEECS--SSCEEEE---EECTTSCEEEEEECCSS-----
T ss_pred             -E-----------------eeeee-------eccccccc-cccccc--cCccccc---ccccccccccccccccc-----
Confidence             9                 99998       66554311 112389  9999999   99999999988775422     


Q ss_pred             ccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE-E
Q psy10942        257 EKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL-L  335 (537)
Q Consensus       257 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l  335 (537)
                                                            ..+++|++++++.     ...+.+|...|++++|+|++++ |
T Consensus       126 --------------------------------------~~~~v~~~~~~~~-----~~~l~~h~~~v~~v~~~~~~~~~l  162 (311)
T d1nr0a1         126 --------------------------------------RFGHVFLFDTGTS-----NGNLTGQARAMNSVDFKPSRPFRI  162 (311)
T ss_dssp             --------------------------------------CSEEEEETTTCCB-----CBCCCCCSSCEEEEEECSSSSCEE
T ss_pred             --------------------------------------ccccccccccccc-----cccccccccccccccccccceeee
Confidence                                                  1234455544443     3445678899999999999885 7


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      ++|+.|+.|++||++ ..+....+..|..                                                 .|
T Consensus       163 ~sgs~d~~i~i~d~~-~~~~~~~~~~~~~-------------------------------------------------~i  192 (311)
T d1nr0a1         163 ISGSDDNTVAIFEGP-PFKFKSTFGEHTK-------------------------------------------------FV  192 (311)
T ss_dssp             EEEETTSCEEEEETT-TBEEEEEECCCSS-------------------------------------------------CE
T ss_pred             ccccccccccccccc-ccccccccccccc-------------------------------------------------cc
Confidence            889999999999998 5555555444433                                                 78


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee-------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE-------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC  488 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~  488 (537)
                      .+++|+|+++++++++.|+.|++||+.+++....++       +|.+.|++++|+|++++|++|+.||.|+|||++++++
T Consensus       193 ~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~  272 (311)
T d1nr0a1         193 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV  272 (311)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             cccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcE
Confidence            899999999999999999999999999887776654       5788999999999999999999999999999999999


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ++.+..|.....          ..+   .+.++++.|++++.||.|++|
T Consensus       273 ~~~l~~~~~~~~----------~~~---~~~~~~~~l~s~s~dG~i~~w  308 (311)
T d1nr0a1         273 EKTIPVGTRIED----------QQL---GIIWTKQALVSISANGFINFV  308 (311)
T ss_dssp             EEEEECCSSGGG----------CEE---EEEECSSCEEEEETTCCEEEE
T ss_pred             EEEEECCCCccc----------eEE---EEEecCCEEEEEECCCEEEEE
Confidence            999987754220          333   566778899999999999998

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-37  Score=294.14  Aligned_cols=323  Identities=17%  Similarity=0.181  Sum_probs=242.2

Q ss_pred             EEEeCccceEEeeeccceeh-----hhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         70 VLAGGEKSLLHYYETSAVKE-----LYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        70 ~~~~~~~~~i~~wd~~~~~~-----~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      .+....++.+.+|+....+.     ...+.+.+.|++++|||||++||+|+ |+.|+|||+.+           ++.+..
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~-----------~~~~~~   98 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-----------GSLVAR   98 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-----------CCEEEE
T ss_pred             ccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecc-----------cceEee
Confidence            34455577788898654432     33345668999999999999999986 89999999998           666666


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDE  224 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~  224 (537)
                      +..+.......                ..    +                 ..              ....     +|  
T Consensus        99 ~~~~~~~~~~~----------------~~----~-----------------~~--------------~~~~-----~~--  120 (388)
T d1erja_          99 LSDDSAANKDP----------------EN----L-----------------NT--------------SSSP-----SS--  120 (388)
T ss_dssp             ECC-------------------------------------------------------------------------CC--
T ss_pred             ecccccccccc----------------cc----c-----------------cc--------------cccc-----CC--
Confidence            65543211100                00    1                 00              0022     78  


Q ss_pred             cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      ...|.++   +|+|++++|++|+.||.++  +|+...+                                          
T Consensus       121 ~~~V~~l---~~s~~~~~l~s~~~dg~v~--i~~~~~~------------------------------------------  153 (388)
T d1erja_         121 DLYIRSV---CFSPDGKFLATGAEDRLIR--IWDIENR------------------------------------------  153 (388)
T ss_dssp             CCBEEEE---EECTTSSEEEEEETTSCEE--EEETTTT------------------------------------------
T ss_pred             CCCEEEE---EECCCCCcceecccccccc--ccccccc------------------------------------------
Confidence            8999999   9999999999999998888  8877652                                          


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE----------ecCCCCEEEEEcCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR----------GHKKGTQIVSTGAD  374 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------~~~~~~~l~~~~~d  374 (537)
                       +.     .....+|...|.++++++++..+++++.++.+++||.. .........          ...++.++++++.|
T Consensus       154 -~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  226 (388)
T d1erja_         154 -KI-----VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR-TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD  226 (388)
T ss_dssp             -EE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECSSCEEEEEECSTTCCEEEEEETT
T ss_pred             -cc-----ccccccccccccccccccccccccccccceeeeeeecc-ccccccccccccccccccccCCCCCeEEEEcCC
Confidence             11     12234678899999999999999999999999999998 444333322          23458899999999


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce---------
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV---------  445 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------  445 (537)
                      +.|++||..++.....+........          ...+.|.+++|+|++++|++++.||.|++||+.+++         
T Consensus       227 ~~i~i~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  296 (388)
T d1erja_         227 RAVRVWDSETGFLVERLDSENESGT----------GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN  296 (388)
T ss_dssp             SCEEEEETTTCCEEEEEC------C----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred             CeEEEeecccCccceeecccccccc----------CCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccccc
Confidence            9999999999987776643211000          001178899999999999999999999999987543         


Q ss_pred             ---eeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc---cceeee
Q psy10942        446 ---CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL---PRQLCS  519 (537)
Q Consensus       446 ---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~s  519 (537)
                         .......|...|.+++|+|++++|++|+.||.|++||+++++++..+++|.+.|           .++   +...|+
T Consensus       297 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V-----------~~~~~~~~~~~s  365 (388)
T d1erja_         297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV-----------ISVAVANGSSLG  365 (388)
T ss_dssp             --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------EEEEECSSCTTC
T ss_pred             ccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCE-----------EEEEEecCcccC
Confidence               344556788999999999999999999999999999999999999999999988           554   112578


Q ss_pred             cCCCEEEEEeCCCCEEeC
Q psy10942        520 RNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       520 ~~~~~l~s~~~dg~i~vW  537 (537)
                      |++++|+||+.||+|+||
T Consensus       366 pd~~~l~s~s~Dg~I~iW  383 (388)
T d1erja_         366 PEYNVFATGSGDCKARIW  383 (388)
T ss_dssp             TTCEEEEEEETTSEEEEE
T ss_pred             CCCCEEEEEeCCCEEEEE
Confidence            999999999999999999

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-38  Score=290.70  Aligned_cols=286  Identities=12%  Similarity=0.137  Sum_probs=231.9

Q ss_pred             cceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh------cCCCcceEEEEEecccc
Q psy10942         36 RKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ------HGLSSPLVRIVRSSVKR  109 (537)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~------~~~~~~v~~~~~s~~~~  109 (537)
                      .++++.+.|..++.++  .++|        ++++|++++ ||.|++||+.++.....      ..+.+.|.+++|+||++
T Consensus        42 ~~~~~~~~H~~~V~~v--~fs~--------~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~  110 (337)
T d1gxra_          42 ARQINTLNHGEVVCAV--TISN--------PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC  110 (337)
T ss_dssp             EEEEEEECCSSCCCEE--EECS--------SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS
T ss_pred             ceEEEECCCCCcEEEE--EECC--------CCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCC
Confidence            4566677788888888  5577        778999988 89999999987643322      22346899999999999


Q ss_pred             EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCC
Q psy10942        110 MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRS  189 (537)
Q Consensus       110 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~  189 (537)
                      +|++++.|+.|++||+....         .+....+..|...+..++|+ +++..+++++.+..    +           
T Consensus       111 ~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~d~~----i-----------  165 (337)
T d1gxra_         111 TLIVGGEASTLSIWDLAAPT---------PRIKAELTSSAPACYALAIS-PDSKVCFSCCSDGN----I-----------  165 (337)
T ss_dssp             EEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEEEEC-TTSSEEEEEETTSC----E-----------
T ss_pred             EEEEeecccccccccccccc---------cccccccccccccccccccc-cccccccccccccc----c-----------
Confidence            99999999999999987621         45667788899999999999 77888887777766    8           


Q ss_pred             cchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccc
Q psy10942        190 HNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLF  267 (537)
Q Consensus       190 ~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~  267 (537)
                            ++|++       .+.+..  ..     +|  ...|.++   +|++++..+++++.|+.++  +|++..+     
T Consensus       166 ------~~~~~-------~~~~~~~~~~-----~~--~~~v~~l---~~s~~~~~~~~~~~d~~v~--i~d~~~~-----  215 (337)
T d1gxra_         166 ------AVWDL-------HNQTLVRQFQ-----GH--TDGASCI---DISNDGTKLWTGGLDNTVR--SWDLREG-----  215 (337)
T ss_dssp             ------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSEEE--EEETTTT-----
T ss_pred             ------ccccc-------cccccccccc-----cc--ccccccc---ccccccccccccccccccc--ccccccc-----
Confidence                  89998       766665  55     88  8999999   9999999988888888888  7777652     


Q ss_pred             cccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy10942        268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW  347 (537)
Q Consensus       268 ~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~  347 (537)
                                                            +...      ...|...|.+++|+|++++|++++.|+.+++|
T Consensus       216 --------------------------------------~~~~------~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~  251 (337)
T d1gxra_         216 --------------------------------------RQLQ------QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             --------------------------------------EEEE------EEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             --------------------------------------eeec------ccccccceEEEEEcccccccceeccccccccc
Confidence                                                  1110      11356779999999999999999999999999


Q ss_pred             EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942        348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL  427 (537)
Q Consensus       348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  427 (537)
                      |++.. ... ....                                |..                 .|.+++|+|++++|
T Consensus       252 d~~~~-~~~-~~~~--------------------------------~~~-----------------~i~~v~~s~~g~~l  280 (337)
T d1gxra_         252 HVNKP-DKY-QLHL--------------------------------HES-----------------CVLSLKFAYCGKWF  280 (337)
T ss_dssp             ETTSS-CEE-EECC--------------------------------CSS-----------------CEEEEEECTTSSEE
T ss_pred             ccccc-ccc-cccc--------------------------------ccc-----------------ccceEEECCCCCEE
Confidence            99832 221 1111                                222                 78889999999999


Q ss_pred             EEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       428 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      ++++.||.|++||+.+++.+..+. |.+.|++++|+|++++|++++.||.|+|||+
T Consensus       281 ~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         281 VSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999888876 7889999999999999999999999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.6e-38  Score=297.43  Aligned_cols=324  Identities=15%  Similarity=0.200  Sum_probs=244.7

Q ss_pred             EEEecCcceEEEEEcCcccee-----eeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942         19 SVHCGRDKVLFTWDLSSRKQL-----RSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH   93 (537)
Q Consensus        19 l~s~~~~g~v~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~   93 (537)
                      .+....++.+.+|+.+..+..     +.+.|.+.+.++  .++|        ++++|++|+ |+.|++||+.+++.+..+
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l--~fs~--------dg~~lasg~-d~~i~iW~~~~~~~~~~~   99 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCV--KFSN--------DGEYLATGC-NKTTQVYRVSDGSLVARL   99 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEE--EECT--------TSSEEEEEC-BSCEEEEETTTCCEEEEE
T ss_pred             ccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEE--EECC--------CCCEEEEEe-CCeEEEEEecccceEeee
Confidence            456667788999997655432     344577888888  5588        668999987 899999999998876665


Q ss_pred             CCC-------------------cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         94 GLS-------------------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        94 ~~~-------------------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      ..+                   ..|.+++|+|++++|++|+.|+.|++||...           .+....+.+|...|.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~-----------~~~~~~~~~h~~~v~~  168 (388)
T d1erja_         100 SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN-----------RKIVMILQGHEQDIYS  168 (388)
T ss_dssp             CC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT-----------TEEEEEECCCSSCEEE
T ss_pred             cccccccccccccccccccCCCCCEEEEEECCCCCcceecccccccccccccc-----------cccccccccccccccc
Confidence            432                   4699999999999999999999999999998           7888899999999999


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEe
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~  232 (537)
                      ++|+ +++..+++++.++.    +                 ++||.       .+....  ..     .+  ...+... 
T Consensus       169 ~~~~-~~~~~~~~~~~~~~----i-----------------~~~d~-------~~~~~~~~~~-----~~--~~~~~~~-  211 (388)
T d1erja_         169 LDYF-PSGDKLVSGSGDRT----V-----------------RIWDL-------RTGQCSLTLS-----IE--DGVTTVA-  211 (388)
T ss_dssp             EEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TTTEEEEEEE-----CS--SCEEEEE-
T ss_pred             cccc-ccccccccccccee----e-----------------eeeec-------cccccccccc-----cc--ccccccc-
Confidence            9999 67777878777766    8                 99998       666655  33     44  4444444 


Q ss_pred             ccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeee
Q psy10942        233 RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVL  312 (537)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~  312 (537)
                        .+.+++++|++++.|+.++  +|+...+..                                +...+.  .       
T Consensus       212 --~~~~~~~~l~~~~~d~~i~--i~~~~~~~~--------------------------------~~~~~~--~-------  246 (388)
T d1erja_         212 --VSPGDGKYIAAGSLDRAVR--VWDSETGFL--------------------------------VERLDS--E-------  246 (388)
T ss_dssp             --ECSTTCCEEEEEETTSCEE--EEETTTCCE--------------------------------EEEEC-----------
T ss_pred             --ccCCCCCeEEEEcCCCeEE--EeecccCcc--------------------------------ceeecc--c-------
Confidence              4556888999999999998  888876321                                111111  1       


Q ss_pred             cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       313 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      .....+|...|.+++|+|++++|++++.|+.|++||+. .............                    ........
T Consensus       247 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~--------------------~~~~~~~~  305 (388)
T d1erja_         247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ-NANNKSDSKTPNS--------------------GTCEVTYI  305 (388)
T ss_dssp             ----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------------------------------CEEEEEE
T ss_pred             cccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEecc-CCccccccccccc--------------------cceeeecc
Confidence            22345788999999999999999999999999999998 3332222221111                    11222222


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE------ecCC
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF------INKG  466 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~------s~~~  466 (537)
                      .|..                 .+.+++|+|++++|++|+.||.|++||+.+++++.++++|.+.|+++++      +|++
T Consensus       306 ~~~~-----------------~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~  368 (388)
T d1erja_         306 GHKD-----------------FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY  368 (388)
T ss_dssp             CCSS-----------------CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred             cccc-----------------eEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCC
Confidence            3332                 7888999999999999999999999999999999999999999999975      5789


Q ss_pred             CEEEEEeCCCcEEEEECC
Q psy10942        467 TQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~  484 (537)
                      ++||+|+.||+|+||+++
T Consensus       369 ~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         369 NVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEEEETTSEEEEEEEE
T ss_pred             CEEEEEeCCCEEEEEeee
Confidence            999999999999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.8e-37  Score=281.29  Aligned_cols=279  Identities=14%  Similarity=0.125  Sum_probs=215.7

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ  144 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  144 (537)
                      ++..++.++ ++.+.+||+.+++....+..| +.|++++|+|+|++||+|+.|++|++||+.+..         ......
T Consensus        28 ~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~---------~~~~~~   97 (311)
T d1nr0a1          28 AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT---------HILKTT   97 (311)
T ss_dssp             TSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT---------CCEEEE
T ss_pred             CCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccc---------cccccc
Confidence            344555554 556999999999888887765 799999999999999999999999999998831         223456


Q ss_pred             eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      +.+|...|.+++|+ ++++.+++++.+.+  ..+                 ++|+.       ++++..  +.     +|
T Consensus        98 ~~~~~~~v~~v~~s-~d~~~l~~~~~~~~--~~~-----------------~v~~~-------~~~~~~~~l~-----~h  145 (311)
T d1nr0a1          98 IPVFSGPVKDISWD-SESKRIAAVGEGRE--RFG-----------------HVFLF-------DTGTSNGNLT-----GQ  145 (311)
T ss_dssp             EECSSSCEEEEEEC-TTSCEEEEEECCSS--CSE-----------------EEEET-------TTCCBCBCCC-----CC
T ss_pred             cccccCcccccccc-cccccccccccccc--ccc-----------------ccccc-------cccccccccc-----cc
Confidence            88899999999999 77888888776554  446                 67887       666554  67     99


Q ss_pred             CCcCeEEEEeccCcccCCCe-eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        223 DELKTVTLLERGKTVKEEDL-FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~-l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                        ...|.++   +|+|++++ |++|+.|+.|+  +|++...                                       
T Consensus       146 --~~~v~~v---~~~~~~~~~l~sgs~d~~i~--i~d~~~~---------------------------------------  179 (311)
T d1nr0a1         146 --ARAMNSV---DFKPSRPFRIISGSDDNTVA--IFEGPPF---------------------------------------  179 (311)
T ss_dssp             --SSCEEEE---EECSSSSCEEEEEETTSCEE--EEETTTB---------------------------------------
T ss_pred             --ccccccc---cccccceeeecccccccccc--ccccccc---------------------------------------
Confidence              9999999   99999875 66777777777  7776652                                       


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                          +.     ......|..+|+++.|+|+++++++++.|+.+++||+. .......+....                  
T Consensus       180 ----~~-----~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~-~~~~~~~~~~~~------------------  231 (311)
T d1nr0a1         180 ----KF-----KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV-DGTKTGVFEDDS------------------  231 (311)
T ss_dssp             ----EE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEECBCTT------------------
T ss_pred             ----cc-----ccccccccccccccccCccccccccccccccccccccc-cccccccccccc------------------
Confidence                11     22235678899999999999999999999999999998 444333332211                  


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc-ceEEE
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA-SVLRC  460 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~  460 (537)
                             ....+|..                 .|.+++|+|++++|++|+.||.|++||+++++++.++..|.. ....+
T Consensus       232 -------~~~~~h~~-----------------~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~  287 (311)
T d1nr0a1         232 -------LKNVAHSG-----------------SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL  287 (311)
T ss_dssp             -------SSSCSSSS-----------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred             -------cccccccc-----------------cccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEE
Confidence                   11123333                 788999999999999999999999999999999999987653 22334


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECC
Q psy10942        461 HFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       461 ~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      .+.+++.+|++++.||.|++||++
T Consensus       288 ~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         288 GIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEECSSCEEEEETTCCEEEEETT
T ss_pred             EEEecCCEEEEEECCCEEEEEeCC
Confidence            445556689999999999999974

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-36  Score=281.75  Aligned_cols=284  Identities=17%  Similarity=0.223  Sum_probs=235.7

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      .+..++|+||.+.|++++|+ +++++|++++.++.    |                 ++||+       .+++..  +. 
T Consensus        45 ~~~~~tL~GH~~~I~~l~~s-~~~~~l~sgs~Dg~----v-----------------~iWd~-------~~~~~~~~~~-   94 (340)
T d1tbga_          45 MRTRRTLRGHLAKIYAMHWG-TDSRLLVSASQDGK----L-----------------IIWDS-------YTTNKVHAIP-   94 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTTEEEEEEE-
T ss_pred             eeeeEEECCCCCCEEEEEEC-CCCCEEEEEECCCc----e-----------------eeeec-------ccceeEEEEe-
Confidence            56778999999999999999 78889998888777    9                 99999       877766  77 


Q ss_pred             cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc-------eEEE
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV-------ELLA  289 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~l~  289 (537)
                          +|  ..+|.++   +|+|+++++++++.|+.+.  +|+..........     ...+.+|.....       ..+.
T Consensus        95 ----~~--~~~v~~v---~~~~~~~~l~~~~~d~~i~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  158 (340)
T d1tbga_          95 ----LR--SSWVMTC---AYAPSGNYVACGGLDNICS--IYNLKTREGNVRV-----SRELAGHTGYLSCCRFLDDNQIV  158 (340)
T ss_dssp             ----CS--CSCEEEE---EECTTSSEEEEEETTCCEE--EEESSSSCSCCCE-----EEEECCCSSCEEEEEEEETTEEE
T ss_pred             ----cc--cccEEee---Eeeccceeeeeecccceee--ccccccccccccc-----ceecccccccccccccccccccc
Confidence                89  9999999   9999999999999999999  9998775433222     223333332110       4567


Q ss_pred             EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942        290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIV  369 (537)
Q Consensus       290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~  369 (537)
                      ....+.....+........     .....+...+....+.+.+.++++++.|+.|++||++ ..+.+..+..|..     
T Consensus       159 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~-~~~~~~~~~~h~~-----  227 (340)
T d1tbga_         159 TSSGDTTCALWDIETGQQT-----TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHES-----  227 (340)
T ss_dssp             EEETTTEEEEEETTTTEEE-----EEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-TTEEEEEECCCSS-----
T ss_pred             ccccccccccccccccccc-----ccccccceeEeeeccccccceeEEeecCceEEEEECC-CCcEEEEEeCCCC-----
Confidence            7778888888887776542     2334566778888888888888888888888888887 5555555544433     


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS  449 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~  449 (537)
                                                                  .|.+++|+|++++|++|+.|+.|++||+...+.+..
T Consensus       228 --------------------------------------------~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~  263 (340)
T d1tbga_         228 --------------------------------------------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT  263 (340)
T ss_dssp             --------------------------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             --------------------------------------------CeEEEEECCCCCEEEEEeCCCeEEEEeecccccccc
Confidence                                                        788999999999999999999999999999887776


Q ss_pred             ee--cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942        450 LE--GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR  527 (537)
Q Consensus       450 ~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s  527 (537)
                      +.  .+...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|..+|           +++   +|+|++++|+|
T Consensus       264 ~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V-----------~~l---~~s~d~~~l~s  329 (340)
T d1tbga_         264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV-----------SCL---GVTDDGMAVAT  329 (340)
T ss_dssp             ECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-----------EEE---EECTTSSCEEE
T ss_pred             cccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCE-----------EEE---EEeCCCCEEEE
Confidence            64  466779999999999999999999999999999999999999999999           999   99999999999


Q ss_pred             EeCCCCEEeC
Q psy10942        528 GGWSPQVVVY  537 (537)
Q Consensus       528 ~~~dg~i~vW  537 (537)
                      |+.||.|+||
T Consensus       330 ~s~Dg~v~iW  339 (340)
T d1tbga_         330 GSWDSFLKIW  339 (340)
T ss_dssp             EETTSCEEEE
T ss_pred             EccCCEEEEe
Confidence            9999999999

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.5e-37  Score=291.47  Aligned_cols=261  Identities=13%  Similarity=0.089  Sum_probs=202.8

Q ss_pred             cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG  176 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~  176 (537)
                      ++|++++|+|||++||+++.|+.|+|||..+++         ...+..+++|.+.|.+++|+ |++++|++++.++.   
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~---------~~~~~~l~gH~~~V~~l~fs-p~~~~l~s~s~D~~---   74 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK---------WVQVHELKEHNGQVTGVDWA-PDSNRIVTCGTDRN---   74 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTE---------EEEEEEEECCSSCEEEEEEE-TTTTEEEEEETTSC---
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC---------EEEEEEecCCCCCEEEEEEC-CCCCEEEEEECCCe---
Confidence            689999999999999999999999999998621         35677889999999999999 78888988887766   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST  252 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i  252 (537)
                       |                 ++||+       .+....    +.     +|  ...|.++   +|+|++++|++++.|+.+
T Consensus        75 -i-----------------~vWd~-------~~~~~~~~~~~~-----~~--~~~v~~i---~~~p~~~~l~~~s~d~~i  119 (371)
T d1k8kc_          75 -A-----------------YVWTL-------KGRTWKPTLVIL-----RI--NRAARCV---RWAPNEKKFAVGSGSRVI  119 (371)
T ss_dssp             -E-----------------EEEEE-------ETTEEEEEEECC-----CC--SSCEEEE---EECTTSSEEEEEETTSSE
T ss_pred             -E-----------------EEEee-------cccccccccccc-----cc--ccccccc---ccccccccceeecccCcc
Confidence             9                 99998       654432    45     88  8999999   999999999999999999


Q ss_pred             eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942        253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND  332 (537)
Q Consensus       253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  332 (537)
                      +  +|++........                                           . ......|...|.+++|+|++
T Consensus       120 ~--i~~~~~~~~~~~-------------------------------------------~-~~~~~~~~~~v~~v~~~p~~  153 (371)
T d1k8kc_         120 S--ICYFEQENDWWV-------------------------------------------C-KHIKKPIRSTVLSLDWHPNS  153 (371)
T ss_dssp             E--EEEEETTTTEEE-------------------------------------------E-EEECTTCCSCEEEEEECTTS
T ss_pred             e--eeeeeccccccc-------------------------------------------c-cccccccccccccccccccc
Confidence            9  998776321000                                           0 12234678889999999999


Q ss_pred             CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942        333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT  412 (537)
Q Consensus       333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  412 (537)
                      ++|++++.|+.+++|++... ...........              .-+...++.+.....|..                
T Consensus       154 ~~l~s~s~D~~v~v~~~~~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~----------------  202 (371)
T d1k8kc_         154 VLLAAGSCDFKCRIFSAYIK-EVEERPAPTPW--------------GSKMPFGELMFESSSSCG----------------  202 (371)
T ss_dssp             SEEEEEETTSCEEEEECCCT-TTSCCCCCBTT--------------BSCCCTTCEEEECCCCSS----------------
T ss_pred             cceeccccCcEEEEEeeccC-ccccccccccc--------------cccccceeeeeeccCccC----------------
Confidence            99999999999999998732 11110000000              001112333444444443                


Q ss_pred             eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                       .+.+++|+|++++|++++.|+.|++||+.+++.+..+..|..+|.+++|+|++++|++| .|+.+++|...
T Consensus       203 -~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~  272 (371)
T d1k8kc_         203 -WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYD  272 (371)
T ss_dssp             -CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEE
T ss_pred             -cEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEE-cCCceEEEEee
Confidence             68889999999999999999999999999999999999999999999999999877765 47776666543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8e-37  Score=281.22  Aligned_cols=296  Identities=17%  Similarity=0.209  Sum_probs=248.0

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY   81 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   81 (537)
                      ..|+||+|+  |++++|+||+.||+|+|||+++++++..+. +...+..+  .+.|        ++.+++++..++.+.+
T Consensus        18 ~~I~~l~~s--p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~--~~~~--------~~~~~~~~~~~~~~~~   85 (317)
T d1vyhc1          18 SPVTRVIFH--PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI--SFDH--------SGKLLASCSADMTIKL   85 (317)
T ss_dssp             SCEEEEEEC--SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEE--EECT--------TSSEEEEEETTSCCCE
T ss_pred             CCeEEEEEc--CCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEE--eeec--------cccccccccccccccc
Confidence            469999999  899999999999999999999999999887 45666666  5577        6688999999999999


Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      |+....+....+..+ ..+.++.|+|+++.+++++.|+.+++||+.+           .+....+.+|...+.+++|+ +
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~  153 (317)
T d1vyhc1          86 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-----------GYCVKTFTGHREWVRMVRPN-Q  153 (317)
T ss_dssp             EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------CCEEEEEECCSSCEEEEEEC-T
T ss_pred             ccccccccccccccccccceeeeccCCCceEEeeccCcceeEeeccc-----------ceeeeEEccCCCcceeeecc-c
Confidence            999888776666644 6899999999999999999999999999998           67888999999999999999 7


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      ++..+++++.++.    +                 ++|+.       .+.+..  +.     +|  ...+.++   .++|
T Consensus       154 ~~~~l~~~~~d~~----v-----------------~~~~~-------~~~~~~~~~~-----~~--~~~i~~~---~~~~  195 (317)
T d1vyhc1         154 DGTLIASCSNDQT----V-----------------RVWVV-------ATKECKAELR-----EH--RHVVECI---SWAP  195 (317)
T ss_dssp             TSSEEEEEETTSC----E-----------------EEEET-------TTCCEEEEEC-----CC--SSCEEEE---EECC
T ss_pred             CCCEEEEEeCCCe----E-----------------EEEee-------ccceeeEEEe-----cC--CCCceEE---EEee
Confidence            8888888877776    9                 99998       766665  66     88  8999999   9999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ++.........+...  ......+                       ..+++++.|+.|++|+..+++..     ..+.+
T Consensus       196 ~~~~~~~~~~~~~~~--~~~~~~~-----------------------~~~~~~~~d~~i~~~~~~~~~~~-----~~~~~  245 (317)
T d1vyhc1         196 ESSYSSISEATGSET--KKSGKPG-----------------------PFLLSGSRDKTIKMWDVSTGMCL-----MTLVG  245 (317)
T ss_dssp             SCGGGGGGGCCSCC---------C-----------------------CEEEEEETTSEEEEEETTTTEEE-----EEEEC
T ss_pred             ccccceeecccccee--eeeccCC-----------------------ceeEeccCCCEEEEEECCCCcEE-----EEEeC
Confidence            987766555554443  3222221                       47889999999999999998763     44578


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      |...|.+++|+|++++|++++.||.|++||+. ..+++..+..|..                                  
T Consensus       246 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h~~----------------------------------  290 (317)
T d1vyhc1         246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAHEH----------------------------------  290 (317)
T ss_dssp             CSSCEEEEEECSSSSCEEEEETTTEEEEECCT-TSCCCEEEECCSS----------------------------------
T ss_pred             CCCCEEEEEECCCCCEEEEEECCCeEEEEECC-CCcEEEEEcCCCC----------------------------------
Confidence            99999999999999999999999999999998 5566666665544                                  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC  440 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d  440 (537)
                                     .|++++|+|++++|++|+.||.|++||
T Consensus       291 ---------------~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         291 ---------------FVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             ---------------CEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ---------------CEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence                           889999999999999999999999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.7e-35  Score=275.57  Aligned_cols=292  Identities=17%  Similarity=0.213  Sum_probs=222.3

Q ss_pred             hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                      ..+++++| +.|.+++|+|++++||+|+.||+|+|||+.+           ++.+..+..|...|.+++|+ +++.++++
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~-----------~~~~~~~~~~~~~v~~v~~~-~~~~~l~~  114 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-----------TNKVHAIPLRSSWVMTCAYA-PSGNYVAC  114 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT-----------TEEEEEEECSCSCEEEEEEC-TTSSEEEE
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeeccc-----------ceeEEEEecccccEEeeEee-ccceeeee
Confidence            34456655 6899999999999999999999999999999           78889999999999999999 78888888


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      ++.++.    +                 ++|+.       ...... .....+.+|  .......   . ...+..+...
T Consensus       115 ~~~d~~----i-----------------~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~---~-~~~~~~~~~~  160 (340)
T d1tbga_         115 GGLDNI----C-----------------SIYNL-------KTREGNVRVSRELAGH--TGYLSCC---R-FLDDNQIVTS  160 (340)
T ss_dssp             EETTCC----E-----------------EEEES-------SSSCSCCCEEEEECCC--SSCEEEE---E-EEETTEEEEE
T ss_pred             ecccce----e-----------------ecccc-------cccccccccceecccc--ccccccc---c-cccccccccc
Confidence            887776    7                 77776       333222 111222367  6665555   3 3445567777


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV  326 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~  326 (537)
                      ..+....  .+............... ...........-..+++++.|+.|++||+++++.     ...+.+|...|+++
T Consensus       161 ~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~-----~~~~~~h~~~i~~v  232 (340)
T d1tbga_         161 SGDTTCA--LWDIETGQQTTTFTGHT-GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC-----RQTFTGHESDINAI  232 (340)
T ss_dssp             ETTTEEE--EEETTTTEEEEEEECCS-SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE-----EEEECCCSSCEEEE
T ss_pred             ccccccc--ccccccccccccccccc-eeEeeeccccccceeEEeecCceEEEEECCCCcE-----EEEEeCCCCCeEEE
Confidence            7777777  66665532111110000 0000001111226889999999999999998876     34457899999999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC
Q psy10942        327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD  406 (537)
Q Consensus       327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  406 (537)
                      +|+|++++|++++.|+.|++|++. .......+....                              +..          
T Consensus       233 ~~~p~~~~l~s~s~d~~i~~~~~~-~~~~~~~~~~~~------------------------------~~~----------  271 (340)
T d1tbga_         233 CFFPNGNAFATGSDDATCRLFDLR-ADQELMTYSHDN------------------------------IIC----------  271 (340)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCTT------------------------------CCS----------
T ss_pred             EECCCCCEEEEEeCCCeEEEEeec-cccccccccccc------------------------------ccC----------
Confidence            999999999999999999999998 444433332211                              111          


Q ss_pred             CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                             .+.+++|+|++++|++|+.||.|++||+.+++++..+.+|.++|++++|+|++++|++|+.||.|+|||
T Consensus       272 -------~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         272 -------GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             -------CEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             -------ceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence                   688899999999999999999999999999999999999999999999999999999999999999997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-35  Score=268.26  Aligned_cols=285  Identities=13%  Similarity=0.111  Sum_probs=210.5

Q ss_pred             eehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhhhcccCCCcc
Q psy10942         87 VKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDIALLGEEDSH  164 (537)
Q Consensus        87 ~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~  164 (537)
                      |+..+.+.+| +.|++++|+||+++||+|+.|++|++||+.+           ++..+.+ .+|...|.+++|+ +++. 
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~-----------~~~~~~~~~~h~~~v~~v~~~-~~g~-   68 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-----------GISNRVFPDVHATMITGIKTT-SKGD-   68 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------CCEEECSSCSCSSCEEEEEEC-TTSC-
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCC-----------CcEEEEEcCCCCCcEEEEEee-ccce-
Confidence            3455666666 6899999999999999999999999999998           5666666 4688899999999 5554 


Q ss_pred             EEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeee
Q psy10942        165 IVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFP  244 (537)
Q Consensus       165 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~  244 (537)
                      +++++.++.    +                 ++|+.       ..............+  ...+.++   +++|+++.++
T Consensus        69 ~~~~~~d~~----v-----------------~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~---~~s~~g~~~~  115 (299)
T d1nr0a2          69 LFTVSWDDH----L-----------------KVVPA-------GGSGVDSSKAVANKL--SSQPLGL---AVSADGDIAV  115 (299)
T ss_dssp             EEEEETTTE----E-----------------EEECS-------SSSSSCTTSCCEEEC--SSCEEEE---EECTTSSCEE
T ss_pred             eecccceee----E-----------------EEecc-------CCccccccccccccc--ccccccc---cccccccccc
Confidence            555565655    8                 88887       433222110111256  7788889   8999987766


Q ss_pred             eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        245 RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       245 ~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      +++. +.+.  +|+...                                           ...         ......+.
T Consensus       116 ~~~~-~~i~--~~~~~~-------------------------------------------~~~---------~~~~~~~~  140 (299)
T d1nr0a2         116 AACY-KHIA--IYSHGK-------------------------------------------LTE---------VPISYNSS  140 (299)
T ss_dssp             EEES-SEEE--EEETTE-------------------------------------------EEE---------EECSSCEE
T ss_pred             cccc-cccc--cccccc-------------------------------------------ccc---------cccccccc
Confidence            5543 4555  555322                                           000         01123467


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeE-EEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN-VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      +++|+|++++|++++.|+.|++||+. ..+... ....|+.                                       
T Consensus       141 ~~~~s~~~~~l~~g~~dg~i~~~d~~-~~~~~~~~~~~~~~---------------------------------------  180 (299)
T d1nr0a2         141 CVALSNDKQFVAVGGQDSKVHVYKLS-GASVSEVKTIVHPA---------------------------------------  180 (299)
T ss_dssp             EEEECTTSCEEEEEETTSEEEEEEEE-TTEEEEEEEEECSS---------------------------------------
T ss_pred             cccccccccccccccccccccccccc-cccccccccccccc---------------------------------------
Confidence            89999999999999999999999998 333222 2222222                                       


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee---eEeecCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL---KSLEGHDASVLRCHFINKGTQIVSTGADGLLKL  480 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~v  480 (537)
                                .|.+++|+|++++|++++.|+.|++||+.++...   ..+.+|...|++++|+|++++|++++.||.|++
T Consensus       181 ----------~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~i  250 (299)
T d1nr0a2         181 ----------EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV  250 (299)
T ss_dssp             ----------CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             ----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEE
Confidence                      7889999999999999999999999999876554   355678999999999999999999999999999


Q ss_pred             EECCCCeeEE--EecCCc-cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        481 WSIKTSTCVS--TFDKHA-LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       481 wd~~~~~~~~--~~~~~~-~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      ||+++++...  ....|. ..+           ..+    +++++++|++++.||.|++|
T Consensus       251 wd~~~~~~~~~~~~~~~~~~~v-----------~~~----~~~~~~~l~s~s~D~~i~iW  295 (299)
T d1nr0a2         251 WNMNKPSDHPIIIKGAHAMSSV-----------NSV----IWLNETTIVSAGQDSNIKFW  295 (299)
T ss_dssp             EETTCTTSCCEEETTSSTTSCE-----------EEE----EEEETTEEEEEETTSCEEEE
T ss_pred             EECCCCCcceEEEecCCCCCcE-----------EEE----EECCCCEEEEEeCCCEEEEE
Confidence            9998765433  223333 334           444    55677899999999999999

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-35  Score=276.66  Aligned_cols=320  Identities=16%  Similarity=0.150  Sum_probs=234.9

Q ss_pred             hcCCC-cce-EEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         92 QHGLS-SPL-VRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        92 ~~~~~-~~v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ++++| +.| +++  ++++++||+|+.|++|+|||+.+           ++++.++.+|.+.|.+++|+|  ++.|++++
T Consensus         7 tL~GH~~~vitc~--~~~~~~l~tgs~Dg~i~vWd~~~-----------~~~~~~l~~H~~~V~~l~~s~--~~~l~s~s   71 (355)
T d1nexb2           7 TLRGHMTSVITCL--QFEDNYVITGADDKMIRVYDSIN-----------KKFLLQLSGHDGGVWALKYAH--GGILVSGS   71 (355)
T ss_dssp             EEECCSSSCEEEE--EEETTEEEEEETTTEEEEEETTT-----------TEEEEEEECCSSCEEEEEEET--TTEEEEEE
T ss_pred             EECCcCCCcEEEE--EECCCEEEEEeCCCeEEEEECCC-----------CcEEEEEECCCCCEEEEEEcC--CCEEEEEe
Confidence            35555 455 544  55788999999999999999998           788999999999999999984  45777777


Q ss_pred             eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942        170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME  249 (537)
Q Consensus       170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d  249 (537)
                      .++.    +                 ++|+.       ........ .....+  .......   .++++++++++++.|
T Consensus        72 ~D~~----i-----------------~iw~~-------~~~~~~~~-~~~~~~--~~~~~~~---~~~~~~~~~~~~~~d  117 (355)
T d1nexb2          72 TDRT----V-----------------RVWDI-------KKGCCTHV-FEGHNS--TVRCLDI---VEYKNIKYIVTGSRD  117 (355)
T ss_dssp             TTCC----E-----------------EEEET-------TTTEEEEE-ECCCSS--CEEEEEE---EEETTEEEEEEEETT
T ss_pred             cccc----c-----------------ccccc-------cccccccc-cccccc--ccccccc---ccccccceeeeecCC
Confidence            7766    9                 99998       66555411 000123  3445556   678899999999999


Q ss_pred             CcceeccccccCCCccccccccc--------------ccceeeeeeCC------cceEEEEEeCCCeEEEEECCCCceee
Q psy10942        250 PSTLEELEKRKTYHFPLFGIFVP--------------EAEHGAFYTGG------TVELLASGSLDKTVKVWSTTGGLKLL  309 (537)
Q Consensus       250 ~~i~~~iw~~~~~~~~~~~~~~~--------------~~~~~~~~~~~------~v~~l~~~~~d~~i~i~~~~~~~~~~  309 (537)
                      +.++  +|++.............              .......|...      .-+.++.+..|+.|++||+.+++.. 
T Consensus       118 ~~i~--iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-  194 (355)
T d1nexb2         118 NTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL-  194 (355)
T ss_dssp             SEEE--EEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE-
T ss_pred             CcEE--EEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccce-
Confidence            9999  99987743211100000              00000011110      0067899999999999999988763 


Q ss_pred             eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        310 NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                          .....+...+.++.++|+++.+++++.|+.|++||+. ....+..+..|..                         
T Consensus       195 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~-~~~~~~~~~~h~~-------------------------  244 (355)
T d1nexb2         195 ----YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NGELMYTLQGHTA-------------------------  244 (355)
T ss_dssp             ----EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TCCEEEEECCCSS-------------------------
T ss_pred             ----eeeeccccccccccccccceeeecccccceEEeeecc-ccccccccccccc-------------------------
Confidence                3345677889999999999999999999999999988 5555555544433                         


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEE-EEecCCCE
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRC-HFINKGTQ  468 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~  468 (537)
                                              .|.++++++  ++|++++.||.|++||+.++...  +..|...+.++ .+++++++
T Consensus       245 ------------------------~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~  296 (355)
T d1nexb2         245 ------------------------LVGLLRLSD--KFLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNI  296 (355)
T ss_dssp             ------------------------CCCEEEECS--SEEEEECTTSEEEEEETTTCCEE--EEEECTTCCCCCEEEECSSE
T ss_pred             ------------------------ccccccccc--ceeeeeeccccccccccccccee--cccccCCceEEEEEcCCCCE
Confidence                                    666777764  68999999999999999987654  44566666665 45677777


Q ss_pred             EEEEeCCCcEEEEECCCCeeEE-EecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        469 IVSTGADGLLKLWSIKTSTCVS-TFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       469 l~s~~~dg~v~vwd~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                      |+++ .|+.|++||+++++++. .+.+|...|           .++   +|+|+ .++++++.||.++||
T Consensus       297 l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V-----------~~v---~~~~~-~~~~~~s~dg~~~l~  350 (355)
T d1nexb2         297 LVSG-SENQFNIYNLRSGKLVHANILKDADQI-----------WSV---NFKGK-TLVAAVEKDGQSFLE  350 (355)
T ss_dssp             EEEE-ETTEEEEEETTTCCBCCSCTTTTCSEE-----------EEE---EEETT-EEEEEEESSSCEEEE
T ss_pred             EEEE-eCCEEEEEECCCCCEEEEEecCCCCCE-----------EEE---EEcCC-eEEEEEECCCcEEEE
Confidence            6666 58999999999999885 567898999           999   99987 578888999998886

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.6e-35  Score=277.64  Aligned_cols=303  Identities=15%  Similarity=0.087  Sum_probs=223.8

Q ss_pred             ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCC-cceEEEEEeccccEEEEEeCCceEE
Q psy10942         45 YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNIS  121 (537)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~  121 (537)
                      .+||.++  .++|        ++.++++++.++.|++||+.+++  .+..++.| +.|.+++|+|++++|++++.|++|+
T Consensus         7 ~~pIt~~--~~s~--------dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~   76 (371)
T d1k8kc_           7 VEPISCH--AWNK--------DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY   76 (371)
T ss_dssp             SSCCCEE--EECT--------TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred             CCCeEEE--EECC--------CCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEE
Confidence            4788888  5688        77899999999999999998765  56666655 6999999999999999999999999


Q ss_pred             EEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942        122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI  201 (537)
Q Consensus       122 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~  201 (537)
                      |||+.++.         ......+.+|...|.+++|+ |+++.+++++.++.    +                 ++|++ 
T Consensus        77 vWd~~~~~---------~~~~~~~~~~~~~v~~i~~~-p~~~~l~~~s~d~~----i-----------------~i~~~-  124 (371)
T d1k8kc_          77 VWTLKGRT---------WKPTLVILRINRAARCVRWA-PNEKKFAVGSGSRV----I-----------------SICYF-  124 (371)
T ss_dssp             EEEEETTE---------EEEEEECCCCSSCEEEEEEC-TTSSEEEEEETTSS----E-----------------EEEEE-
T ss_pred             EEeecccc---------cccccccccccccccccccc-cccccceeecccCc----c-----------------eeeee-
Confidence            99998721         23345567788899999999 78888888887776    8                 88887 


Q ss_pred             HHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942        202 LEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY  280 (537)
Q Consensus       202 ~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~  280 (537)
                            ...... .......+|  ...|.++   +|+|++++|++++.|+.++  +|+...........           
T Consensus       125 ------~~~~~~~~~~~~~~~~--~~~v~~v---~~~p~~~~l~s~s~D~~v~--v~~~~~~~~~~~~~-----------  180 (371)
T d1k8kc_         125 ------EQENDWWVCKHIKKPI--RSTVLSL---DWHPNSVLLAAGSCDFKCR--IFSAYIKEVEERPA-----------  180 (371)
T ss_dssp             ------ETTTTEEEEEEECTTC--CSCEEEE---EECTTSSEEEEEETTSCEE--EEECCCTTTSCCCC-----------
T ss_pred             ------eccccccccccccccc--ccccccc---cccccccceeccccCcEEE--EEeeccCccccccc-----------
Confidence                  443332 111222378  8999999   9999999999999999999  99987643211110           


Q ss_pred             eCCcceEEEEEeCCCeEEEEEC--CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE
Q psy10942        281 TGGTVELLASGSLDKTVKVWST--TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       281 ~~~~v~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  358 (537)
                                      ...|+.  ..+..     ......|...|.+++|+|++++|++++.|+.|++||+. ..+.+..
T Consensus       181 ----------------~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~-~~~~~~~  238 (371)
T d1k8kc_         181 ----------------PTPWGSKMPFGEL-----MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-KKMAVAT  238 (371)
T ss_dssp             ----------------CBTTBSCCCTTCE-----EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-GTTEEEE
T ss_pred             ----------------cccccccccceee-----eeeccCccCcEEEEEeecccccccccccCCcceEEeee-cccceee
Confidence                            000111  11111     23345788999999999999999999999999999998 4555555


Q ss_pred             EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942        359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL  438 (537)
Q Consensus       359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i  438 (537)
                      +..|..                                                 +|.+++|+|++++|++|. |+.+++
T Consensus       239 ~~~~~~-------------------------------------------------~v~s~~fs~d~~~la~g~-d~~~~~  268 (371)
T d1k8kc_         239 LASETL-------------------------------------------------PLLAVTFITESSLVAAGH-DCFPVL  268 (371)
T ss_dssp             EECSSC-------------------------------------------------CEEEEEEEETTEEEEEET-TSSCEE
T ss_pred             eecccc-------------------------------------------------cceeeeecCCCCEEEEEc-CCceEE
Confidence            555443                                                 677888888887777654 566666


Q ss_pred             EECCC--ceeee---------------------------------------EeecCCcceEEEEEecCC----CEEEEEe
Q psy10942        439 WCLTD--YVCLK---------------------------------------SLEGHDASVLRCHFINKG----TQIVSTG  473 (537)
Q Consensus       439 ~d~~~--~~~~~---------------------------------------~~~~~~~~v~~~~~s~~~----~~l~s~~  473 (537)
                      |....  +....                                       ....|.+.|+++++.+.+    ..++|++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g  348 (371)
T d1k8kc_         269 FTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG  348 (371)
T ss_dssp             EEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEE
T ss_pred             EEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEc
Confidence            54322  11100                                       001388899999998854    3689999


Q ss_pred             CCCcEEEEECCC
Q psy10942        474 ADGLLKLWSIKT  485 (537)
Q Consensus       474 ~dg~v~vwd~~~  485 (537)
                      .||.|++||+++
T Consensus       349 ~Dg~v~iW~~~~  360 (371)
T d1k8kc_         349 MDGGMSIWDVRS  360 (371)
T ss_dssp             TTSEEEEEEHHH
T ss_pred             CCCeEEEEeCCc
Confidence            999999999854

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-34  Score=264.91  Aligned_cols=320  Identities=20%  Similarity=0.256  Sum_probs=240.6

Q ss_pred             eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942         82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE  160 (537)
Q Consensus        82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  160 (537)
                      |+..+.+....+++| +.|.+ +++++|++||+|+.|++|+|||+.+           +++++++.+|...|.+++|+ +
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~-----------~~~~~~~~~h~~~V~~v~~~-~   67 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT-----------GKCLRTLVGHTGGVWSSQMR-D   67 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT-----------CCEEEECCCCSSCEEEEEEE-T
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCC-----------CCEEEEEeCCCCCEEEEEeC-C
Confidence            566666777777777 46765 4778899999999999999999998           78899999999999999998 3


Q ss_pred             CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942        161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                        +.|++++.++.    +                 ++|+.       ......  ..     .+  ...+...     ..
T Consensus        68 --~~l~s~s~D~~----~-----------------~~~~~-------~~~~~~~~~~-----~~--~~~~~~~-----~~  105 (342)
T d2ovrb2          68 --NIIISGSTDRT----L-----------------KVWNA-------ETGECIHTLY-----GH--TSTVRCM-----HL  105 (342)
T ss_dssp             --TEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE-----EE
T ss_pred             --Cccccceeccc----c-----------------ccccc-------ccccceeccc-----cc--ceeEeee-----ec
Confidence              47777777766    8                 88887       554444  22     33  4444444     33


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      ....++.+..|+.+.  +|+...+.................   .....++.++.|+.|++||.......     ..+.+
T Consensus       106 ~~~~~~~~~~d~~i~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~i~~~d~~~~~~~-----~~~~~  175 (342)
T d2ovrb2         106 HEKRVVSGSRDATLR--VWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDPETETCL-----HTLQG  175 (342)
T ss_dssp             ETTEEEEEETTSEEE--EEESSSCCEEEEEECCSSCEEEEE---ECSSCEEEEETTSCEEEEEGGGTEEE-----EEECC
T ss_pred             ccccccccccceeEE--Eeecccccceeeeecccccceeec---cccceeeeecCCCeEEEeecccceee-----EEEcC
Confidence            456788889999999  999887542221111000100000   11157889999999999999887653     34566


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC--------CCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      |...+..+.  +++.++++++.||.|++||++ ..+.+..+..|..        ++++++++.|+.|++||+...+....
T Consensus       176 ~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~  252 (342)
T d2ovrb2         176 HTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVE-TGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQT  252 (342)
T ss_dssp             CSSCEEEEE--ECSSEEEEEETTSCEEEEETT-TCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             ccccccccc--CCCCEEEEEeCCCeEEEeecc-cceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEeccccccccc
Confidence            776666554  478899999999999999999 6666666666543        78999999999999999999888777


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee-----cCCcceEEEEEecC
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE-----GHDASVLRCHFINK  465 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~s~~  465 (537)
                      +..+.....              .+.++.+  +++++++|+.||.|++||+++++.++.+.     +|.+.|++++|+|+
T Consensus       253 ~~~~~~~~~--------------~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~  316 (342)
T d2ovrb2         253 LQGPNKHQS--------------AVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT  316 (342)
T ss_dssp             ECSTTSCSS--------------CEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred             ccccceeee--------------ceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCC
Confidence            765432110              3444444  45699999999999999999999988774     57778999999999


Q ss_pred             CCEEEEEeCCCc----EEEEECCC
Q psy10942        466 GTQIVSTGADGL----LKLWSIKT  485 (537)
Q Consensus       466 ~~~l~s~~~dg~----v~vwd~~~  485 (537)
                      +.+|++|+.||+    |++||++.
T Consensus       317 ~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         317 KLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CCEEEEEeCCCCCeeEEEEEeCCC
Confidence            999999999986    99999853

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-33  Score=260.70  Aligned_cols=309  Identities=23%  Similarity=0.349  Sum_probs=236.5

Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      .+..+.++||.+.|.+ +++ +++++|++++.++.    |                 ++||+       .+++++  +. 
T Consensus         6 ~~~~~~l~GH~~~V~s-~~~-~~g~~l~sgs~Dg~----i-----------------~vWd~-------~~~~~~~~~~-   54 (342)
T d2ovrb2           6 LKSPKVLKGHDDHVIT-CLQ-FCGNRIVSGSDDNT----L-----------------KVWSA-------VTGKCLRTLV-   54 (342)
T ss_dssp             CCCCEEEECSTTSCEE-EEE-EETTEEEEEETTSC----E-----------------EEEET-------TTCCEEEECC-
T ss_pred             CCcCEEECCcCCceEE-EEE-ECCCEEEEEeCCCe----E-----------------EEEEC-------CCCCEEEEEe-
Confidence            6777899999998865 355 45788888887777    9                 99999       888776  77 


Q ss_pred             cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                          +|  ...|.++   +|+|+  +|++++.|+.++  +|+....................... .  ..+..+..|+.
T Consensus        55 ----~h--~~~V~~v---~~~~~--~l~s~s~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~d~~  118 (342)
T d2ovrb2          55 ----GH--TGGVWSS---QMRDN--IIISGSTDRTLK--VWNAETGECIHTLYGHTSTVRCMHLH-E--KRVVSGSRDAT  118 (342)
T ss_dssp             ----CC--SSCEEEE---EEETT--EEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEEE-T--TEEEEEETTSE
T ss_pred             ----CC--CCCEEEE---EeCCC--ccccceeccccc--ccccccccceecccccceeEeeeecc-c--cccccccccee
Confidence                99  9999999   99874  999999999999  99988743221111100000000011 1  56788899999


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------CCCEE
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KGTQI  368 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~~~l  368 (537)
                      +.+|+..+++.....     ..+...  .....+....+++++.|+.+++||+. ....+..+..|.        ++..+
T Consensus       119 i~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~l  190 (342)
T d2ovrb2         119 LRVWDIETGQCLHVL-----MGHVAA--VRCVQYDGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRVYSLQFDGIHV  190 (342)
T ss_dssp             EEEEESSSCCEEEEE-----ECCSSC--EEEEEECSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCEEEEEECSSEE
T ss_pred             EEEeecccccceeee-----eccccc--ceeeccccceeeeecCCCeEEEeecc-cceeeEEEcCcccccccccCCCCEE
Confidence            999999988754322     222222  23344567789999999999999998 666666665553        47899


Q ss_pred             EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee
Q psy10942        369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK  448 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~  448 (537)
                      ++++.||.|++||++.++.+..+..|..                 .+.+++++  +++|++++.|+.|++||+...+...
T Consensus       191 ~s~~~dg~i~~~d~~~~~~~~~~~~~~~-----------------~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~  251 (342)
T d2ovrb2         191 VSGSLDTSIRVWDVETGNCIHTLTGHQS-----------------LTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQ  251 (342)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCCS-----------------CEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEE
T ss_pred             EEEeCCCeEEEeecccceeeeEeccccc-----------------ceeEEecC--CCEEEEEcCCCEEEEEecccccccc
Confidence            9999999999999999999998888876                 44444444  4589999999999999999988877


Q ss_pred             Eeec---CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec-----CCccceeccCCCCCCccccccceeeec
Q psy10942        449 SLEG---HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD-----KHALKIRNSDSENDHKGFGLPRQLCSR  520 (537)
Q Consensus       449 ~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~s~  520 (537)
                      .+..   |...+.++.+  +++++++++.||.|++||++++++++.+.     +|...|           +++   +|+|
T Consensus       252 ~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v-----------~~v---~~s~  315 (342)
T d2ovrb2         252 TLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVV-----------WRI---RASN  315 (342)
T ss_dssp             EECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEE-----------EEE---EECS
T ss_pred             cccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCE-----------EEE---EECC
Confidence            7765   4455666655  45699999999999999999999988774     466678           888   9999


Q ss_pred             CCCEEEEEeCCCC----EEeC
Q psy10942        521 NSDCEYRGGWSPQ----VVVY  537 (537)
Q Consensus       521 ~~~~l~s~~~dg~----i~vW  537 (537)
                      ++.+|++|+.||+    |++|
T Consensus       316 ~~~~la~g~~dGt~~~~l~~~  336 (342)
T d2ovrb2         316 TKLVCAVGSRNGTEETKLLVL  336 (342)
T ss_dssp             SEEEEEEECSSSSSCCEEEEE
T ss_pred             CCCEEEEEeCCCCCeeEEEEE
Confidence            9999999999996    7766

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-32  Score=257.72  Aligned_cols=316  Identities=15%  Similarity=0.184  Sum_probs=225.2

Q ss_pred             eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942          5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      |+|++|+    +++|+||+.||+|+|||++++++++++. +..++.++  .+.|        + .++++++.|+.|++|+
T Consensus        16 itc~~~~----~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l--~~s~--------~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2          16 ITCLQFE----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL--KYAH--------G-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEEEE----TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEE--EEET--------T-TEEEEEETTCCEEEEE
T ss_pred             EEEEEEC----CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEE--EEcC--------C-CEEEEEeccccccccc
Confidence            5776554    5799999999999999999999999888 56778877  4466        3 3789999999999999


Q ss_pred             ccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCccccc------------ccccceeEEeecc
Q psy10942         84 TSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERP------------NKILKFRKQFVGF  148 (537)
Q Consensus        84 ~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~------------~~~~~~~~~~~~~  148 (537)
                      ....+........   .......+++++.++++++.|+.|++||+.+........            ............|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            9988776555544   356667789999999999999999999998742211100            0001111222223


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK  226 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~  226 (537)
                      ...+..  +. ++++.++.+..+..    +                 ++||+       .+.+..  ..     ++  ..
T Consensus       161 ~~~v~~--~~-~~~~~~~~~~~d~~----i-----------------~~~d~-------~~~~~~~~~~-----~~--~~  202 (355)
T d1nexb2         161 MASVRT--VS-GHGNIVVSGSYDNT----L-----------------IVWDV-------AQMKCLYILS-----GH--TD  202 (355)
T ss_dssp             SSCEEE--EE-EETTEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SS
T ss_pred             cccccc--cc-cccceeeeecccce----e-----------------eeeec-------ccccceeeee-----cc--cc
Confidence            322222  22 44667777666666    8                 88998       666655  45     67  77


Q ss_pred             eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942        227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL  306 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~  306 (537)
                      .+.++   .++|+++++++++.|+.++  +|+...                                           +.
T Consensus       203 ~~~~~---~~~~~~~~~~~~~~d~~i~--i~d~~~-------------------------------------------~~  234 (355)
T d1nexb2         203 RIYST---IYDHERKRCISASMDTTIR--IWDLEN-------------------------------------------GE  234 (355)
T ss_dssp             CEEEE---EEETTTTEEEEEETTSCEE--EEETTT-------------------------------------------CC
T ss_pred             ccccc---cccccceeeecccccceEE--eeeccc-------------------------------------------cc
Confidence            88888   8888888888888777777  776655                                           22


Q ss_pred             eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      .     ...+.+|...|.+++++  +++|++++.||.|++||++...+   .+..|..                      
T Consensus       235 ~-----~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~----------------------  282 (355)
T d1nexb2         235 L-----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR---KFSYHHT----------------------  282 (355)
T ss_dssp             E-----EEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCE---EEEEECT----------------------
T ss_pred             c-----ccccccccccccccccc--cceeeeeecccccccccccccce---ecccccC----------------------
Confidence            2     22345788889999986  46899999999999999983321   1222221                      


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeee-EEEEcCCCCEEEEEeCCCcEEEEECCCceeee-EeecCCcceEEEEEec
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVW-FVNFSPLDRILISSSGDATIKLWCLTDYVCLK-SLEGHDASVLRCHFIN  464 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~  464 (537)
                                                 .+. ...++++++++++|+ |+.|++||+++++++. .+.+|.++|.+++|+|
T Consensus       283 ---------------------------~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~  334 (355)
T d1nexb2         283 ---------------------------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG  334 (355)
T ss_dssp             ---------------------------TCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEET
T ss_pred             ---------------------------CceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcC
Confidence                                       122 234567777777765 8999999999999875 5678999999999998


Q ss_pred             CCCEEEEEeCCCcEEEEE
Q psy10942        465 KGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       465 ~~~~l~s~~~dg~v~vwd  482 (537)
                      + .++++++.||.++||.
T Consensus       335 ~-~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         335 K-TLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             T-EEEEEEESSSCEEEEE
T ss_pred             C-eEEEEEECCCcEEEEE
Confidence            7 5788899999976654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.4e-32  Score=250.80  Aligned_cols=291  Identities=14%  Similarity=0.149  Sum_probs=209.3

Q ss_pred             cceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC-C-CcceEEEEEeccccEEE
Q psy10942         36 RKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG-L-SSPLVRIVRSSVKRMYA  112 (537)
Q Consensus        36 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~-~~~v~~~~~s~~~~~la  112 (537)
                      |+..+.+. |..++.++  .++|        ++++|++++.||.|++||+++++.+..+. . .+.|.+++|+|+++++ 
T Consensus         2 g~~~~~~~GH~~~V~~l--~~s~--------dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~-   70 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITAL--SSSA--------DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF-   70 (299)
T ss_dssp             TEEEEEECCCSSCEEEE--EECT--------TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE-
T ss_pred             CccceEcCCCCCCcEEE--EECC--------CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceee-
Confidence            34455555 66778888  5688        67899999999999999999998887774 3 3689999999999755 


Q ss_pred             EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcch
Q psy10942        113 VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNE  192 (537)
Q Consensus       113 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~  192 (537)
                      +++.|+.+++|+......        .........+...+.+++|+ +++..++.+ .++.    +              
T Consensus        71 ~~~~d~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~s-~~g~~~~~~-~~~~----i--------------  122 (299)
T d1nr0a2          71 TVSWDDHLKVVPAGGSGV--------DSSKAVANKLSSQPLGLAVS-ADGDIAVAA-CYKH----I--------------  122 (299)
T ss_dssp             EEETTTEEEEECSSSSSS--------CTTSCCEEECSSCEEEEEEC-TTSSCEEEE-ESSE----E--------------
T ss_pred             cccceeeEEEeccCCccc--------cccccccccccccccccccc-ccccccccc-cccc----c--------------
Confidence            556789999999876211        11222334566678889999 666666544 3444    7              


Q ss_pred             hhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccc
Q psy10942        193 WFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP  272 (537)
Q Consensus       193 ~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~  272 (537)
                         ++|+.       ........         ...+.++   +|+|+++++++++.|+.++  +|++....         
T Consensus       123 ---~~~~~-------~~~~~~~~---------~~~~~~~---~~s~~~~~l~~g~~dg~i~--~~d~~~~~---------  169 (299)
T d1nr0a2         123 ---AIYSH-------GKLTEVPI---------SYNSSCV---ALSNDKQFVAVGGQDSKVH--VYKLSGAS---------  169 (299)
T ss_dssp             ---EEEET-------TEEEEEEC---------SSCEEEE---EECTTSCEEEEEETTSEEE--EEEEETTE---------
T ss_pred             ---ccccc-------cccccccc---------ccccccc---ccccccccccccccccccc--cccccccc---------
Confidence               77765       33222222         3457788   8999999999999888888  88876521         


Q ss_pred             ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy10942        273 EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG  352 (537)
Q Consensus       273 ~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  352 (537)
                                              +.              ......|...|++++|+|++++|++++.|+.|++||+...
T Consensus       170 ------------------------~~--------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~  211 (299)
T d1nr0a2         170 ------------------------VS--------------EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN  211 (299)
T ss_dssp             ------------------------EE--------------EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred             ------------------------cc--------------cccccccccccccccccccccccccccccccccccccccc
Confidence                                    00              0012356788999999999999999999999999999833


Q ss_pred             ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                      .... .                             ...+..|..                 .|.+++|+|++++|++|+.
T Consensus       212 ~~~~-~-----------------------------~~~~~~h~~-----------------~v~~l~~s~~~~~l~sgs~  244 (299)
T d1nr0a2         212 FELA-H-----------------------------TNSWTFHTA-----------------KVACVSWSPDNVRLATGSL  244 (299)
T ss_dssp             TEES-C-----------------------------CCCCCCCSS-----------------CEEEEEECTTSSEEEEEET
T ss_pred             cccc-c-----------------------------ccccccccc-----------------ccccccccccccceEEEcC
Confidence            2211 0                             111223333                 7888999999999999999


Q ss_pred             CCcEEEEECCCceeee--EeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942        433 DATIKLWCLTDYVCLK--SLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSIK  484 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~--~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~  484 (537)
                      ||.|++||+.++....  ....|. ..+.++.| +++++|++++.|+.|++||+.
T Consensus       245 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         245 DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             CCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            9999999998754332  223343 45666654 567899999999999999984

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-31  Score=247.41  Aligned_cols=292  Identities=15%  Similarity=0.119  Sum_probs=214.0

Q ss_pred             cceEEEEEeccccEEEEEeCCc-eEEEEecccccCcccccccccceeEEeecch-hhhhhhhcccC-CCccEEEeeeccc
Q psy10942         97 SPLVRIVRSSVKRMYAVVTADH-NISLYRLNSETGLEERPNKILKFRKQFVGFS-DEILDIALLGE-EDSHIVVASNEYL  173 (537)
Q Consensus        97 ~~v~~~~~s~~~~~la~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~-~~~~l~~~~~~~~  173 (537)
                      ..+++++|+|+++.||.++.+. .|+.|+....         .......+.+|. ..|++++|+|. ++.+|++++.++.
T Consensus        18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~---------~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~   88 (325)
T d1pgua1          18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS---------KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK   88 (325)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCC---------SSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCC---------CccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCC
Confidence            4678899999999999887654 3555654431         134566778875 57999999964 4566666666666


Q ss_pred             cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cc---ccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942        174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KH---NTERLGRDELKTVTLLERGKTVKEEDLFPRQSM  248 (537)
Q Consensus       174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~---~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~  248 (537)
                          |                 ++||+       ......  +.   ...+..|  .++|.++   +|+++++++++++.
T Consensus        89 ----i-----------------~iWd~-------~~~~~~~~~~~~~~~~~~~~--~~~v~~v---~~s~~~~~l~~~~~  135 (325)
T d1pgua1          89 ----V-----------------IVWGW-------TFDKESNSVEVNVKSEFQVL--AGPISDI---SWDFEGRRLCVVGE  135 (325)
T ss_dssp             ----E-----------------EEEEE-------EEEGGGTEEEEEEEEEEECC--SSCEEEE---EECTTSSEEEEEEC
T ss_pred             ----E-----------------EEeee-------cCCcceeeeecccccccccc--cCcEEEE---EECCCCCccceeec
Confidence                9                 99998       544433  11   1123367  8899999   99999998877654


Q ss_pred             CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942        249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV  328 (537)
Q Consensus       249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (537)
                      +.                                           ++.+.+|+.++++.     ...+.+|...|.+++|
T Consensus       136 ~~-------------------------------------------~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~  167 (325)
T d1pgua1         136 GR-------------------------------------------DNFGVFISWDSGNS-----LGEVSGHSQRINACHL  167 (325)
T ss_dssp             CS-------------------------------------------SCSEEEEETTTCCE-----EEECCSCSSCEEEEEE
T ss_pred             cc-------------------------------------------cceEEEEeeccccc-----ceeeeecccccccccc
Confidence            32                                           12344455544443     2334678999999999


Q ss_pred             cCCCCE-EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942        329 SPNDKL-LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE  407 (537)
Q Consensus       329 s~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  407 (537)
                      +|++.. +++++.|+.+++||.. ..+.......+.                             .+..           
T Consensus       168 ~~~~~~~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~-----------------------------~~~~-----------  206 (325)
T d1pgua1         168 KQSRPMRSMTVGDDGSVVFYQGP-PFKFSASDRTHH-----------------------------KQGS-----------  206 (325)
T ss_dssp             CSSSSCEEEEEETTTEEEEEETT-TBEEEEEECSSS-----------------------------CTTC-----------
T ss_pred             cccccceEEEeeccccccccccc-ccccceeccccc-----------------------------CCCC-----------
Confidence            998875 6788999999999987 444333332221                             2222           


Q ss_pred             CceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe---cCCCEEEEEeCCCcEEEEEC
Q psy10942        408 NQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI---NKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       408 ~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~dg~v~vwd~  483 (537)
                            .|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.+|..++..+.|+   |++++|++++.|+.|+|||+
T Consensus       207 ------~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~  280 (325)
T d1pgua1         207 ------FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV  280 (325)
T ss_dssp             ------CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEET
T ss_pred             ------ccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEEC
Confidence                  6788999996 6899999999999999999999999999999888777776   78999999999999999999


Q ss_pred             CCCeeEEEecCCccceeccCCCCCCccccccceeeecC-CCEEEEEeCCCCEEeC
Q psy10942        484 KTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN-SDCEYRGGWSPQVVVY  537 (537)
Q Consensus       484 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~-~~~l~s~~~dg~i~vW  537 (537)
                      ++++++..+..|...+..         ..+   ++.+. +.+|++++.||.|+||
T Consensus       281 ~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~l~s~s~dg~i~vw  323 (325)
T d1pgua1         281 TTSKCVQKWTLDKQQLGN---------QQV---GVVATGNGRIISLSLDGTLNFY  323 (325)
T ss_dssp             TTTEEEEEEECCTTCGGG---------CEE---EEEEEETTEEEEEETTSCEEEE
T ss_pred             CCCCEEEEEEecCCcccC---------eEE---EEEECCCCEEEEEECCCEEEEE
Confidence            999999988877654400         233   44433 3478999999999998

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=4.5e-30  Score=243.53  Aligned_cols=293  Identities=14%  Similarity=0.153  Sum_probs=203.3

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc--ccccccce-----eeee---eC--CcceEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG--IFVPEAEH-----GAFY---TG--GTVELL  288 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~--~~~~~~~~-----~~~~---~~--~~v~~l  288 (537)
                      +|  ...|.++   ++++  +++++++.|+.|+  +|+..........  ........     ....   ..  .....+
T Consensus        12 ~H--~~~I~~v---~~~~--~~l~S~S~D~~ir--iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (393)
T d1sq9a_          12 AH--DADIFSV---SACN--SFTVSCSGDGYLK--VWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV   82 (393)
T ss_dssp             CS--SSCEEEE---EECS--SEEEEEETTSEEE--EEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred             cc--cCccEEE---EEeC--CEEEEEECCCeEE--EEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEE
Confidence            99  9999999   8764  6999999999999  9997654321111  00000000     0000   00  111577


Q ss_pred             EEEeCCCeEEEEECCCCceeeeee-----cccccccCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEEccCCc-----
Q psy10942        289 ASGSLDKTVKVWSTTGGLKLLNVL-----RGHKKGHEKDINCVTVSPN-----DKLLASGSLDKTVKVWSTTGGL-----  353 (537)
Q Consensus       289 ~~~~~d~~i~i~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~-----~~~l~~~~~d~~i~i~d~~~~~-----  353 (537)
                      ++++.||.|++|++..........     ......+...+..++|.++     +.++++++.||.+++|++....     
T Consensus        83 ~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~  162 (393)
T d1sq9a_          83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  162 (393)
T ss_dssp             EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccce
Confidence            899999999999976443211110     1112335566788888775     4688999999999999985211     


Q ss_pred             ----------------------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        354 ----------------------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       354 ----------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                                            .....+...+++ ++++++.|++|++||+.+++++..+.....    +.-+       
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~----l~~h-------  230 (393)
T d1sq9a_         163 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS----MINN-------  230 (393)
T ss_dssp             TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------CC-------
T ss_pred             eeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccc----cccc-------
Confidence                                  011223333443 889999999999999999988776543211    0000       


Q ss_pred             EeeeeEEEEcCCCCEEEEEeCCCc---EEEEECCCceeeeEee-------------cCCcceEEEEEecCCCEEEEEeCC
Q psy10942        412 TGGVWFVNFSPLDRILISSSGDAT---IKLWCLTDYVCLKSLE-------------GHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l~~~~~dg~---i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                      ..+|.+++|+||+++|++|+.|++   |++||+.+++.+..+.             +|.+.|++++|+|++++|++++.|
T Consensus       231 ~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D  310 (393)
T d1sq9a_         231 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD  310 (393)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred             cceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCC
Confidence            117899999999999999998874   8999999988877764             799999999999999999999999


Q ss_pred             CcEEEEECCCCeeEEEecCCccceeccC----CCC------CCccccccceeeecCC----------CEEEEEeCCCCEE
Q psy10942        476 GLLKLWSIKTSTCVSTFDKHALKIRNSD----SEN------DHKGFGLPRQLCSRNS----------DCEYRGGWSPQVV  535 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~~~~~~i~~~~----~~~------~~~~~~~~~~~~s~~~----------~~l~s~~~dg~i~  535 (537)
                      ++|++||+++++++.++++|...|....    ..+      ......+   .|.+.+          +.|++++.|+.||
T Consensus       311 ~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~ir  387 (393)
T d1sq9a_         311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV---KFLKKGWRSGMGADLNESLCCVCLDRSIR  387 (393)
T ss_dssp             SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE---EEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred             CEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceE---EECccCceeccccCCCCEEEEEEcCCeEE
Confidence            9999999999999999999998774311    000      1111223   444432          4588888999998


Q ss_pred             eC
Q psy10942        536 VY  537 (537)
Q Consensus       536 vW  537 (537)
                      +|
T Consensus       388 ~~  389 (393)
T d1sq9a_         388 WF  389 (393)
T ss_dssp             EE
T ss_pred             EE
Confidence            86

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.2e-30  Score=237.59  Aligned_cols=289  Identities=11%  Similarity=0.151  Sum_probs=201.6

Q ss_pred             EeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCC--cceEEEEEec--cccEEEEEeCCceEEEEeccc
Q psy10942         54 FHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLS--SPLVRIVRSS--VKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~--~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~  127 (537)
                      .+.|.       +..++++.+....|+.|+....+  .+..+..|  ..|++++|+|  ++++||+|+.||+|+|||+..
T Consensus        24 ~~~~~-------~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~   96 (325)
T d1pgua1          24 SYDPT-------TNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF   96 (325)
T ss_dssp             EEETT-------TTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred             EECCC-------CCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence            56774       44444444555567888765543  34455544  5799999998  568999999999999999976


Q ss_pred             ccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc
Q psy10942        128 ETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK  207 (537)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~  207 (537)
                      +...   ..........+..|.+.|.+++|+ +++.++++++.+.+  +.+                 .+|+.       
T Consensus        97 ~~~~---~~~~~~~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~~~~--~~~-----------------~~~~~-------  146 (325)
T d1pgua1          97 DKES---NSVEVNVKSEFQVLAGPISDISWD-FEGRRLCVVGEGRD--NFG-----------------VFISW-------  146 (325)
T ss_dssp             EGGG---TEEEEEEEEEEECCSSCEEEEEEC-TTSSEEEEEECCSS--CSE-----------------EEEET-------
T ss_pred             Ccce---eeeecccccccccccCcEEEEEEC-CCCCccceeecccc--ceE-----------------EEEee-------
Confidence            3211   001122233456688889999999 78888877776555  345                 66776       


Q ss_pred             cccccc--ccccccccCCCcCeEEEEeccCcccCCCe-eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCc
Q psy10942        208 QSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDL-FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGT  284 (537)
Q Consensus       208 ~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~-l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (537)
                      .++++.  +.     +|  ...|.++   +|+|++.+ +++++.|+.++  +|+....                      
T Consensus       147 ~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~~~~~~~~d~~v~--~~d~~~~----------------------  192 (325)
T d1pgua1         147 DSGNSLGEVS-----GH--SQRINAC---HLKQSRPMRSMTVGDDGSVV--FYQGPPF----------------------  192 (325)
T ss_dssp             TTCCEEEECC-----SC--SSCEEEE---EECSSSSCEEEEEETTTEEE--EEETTTB----------------------
T ss_pred             cccccceeee-----ec--ccccccc---cccccccceEEEeecccccc--ccccccc----------------------
Confidence            656655  67     89  9999999   99998865 56677788888  7776542                      


Q ss_pred             ceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecC
Q psy10942        285 VELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK  363 (537)
Q Consensus       285 v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  363 (537)
                                           +....  ......|...|.+++|+|+ +.+|++++.|+.|++||++ ..+.+..+..|.
T Consensus       193 ---------------------~~~~~--~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~-~~~~~~~l~~~~  248 (325)
T d1pgua1         193 ---------------------KFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK-SGEFLKYIEDDQ  248 (325)
T ss_dssp             ---------------------EEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT-TCCEEEECCBTT
T ss_pred             ---------------------cccee--cccccCCCCccEEeeeccccceeccccccccceeeeeec-cccccccccccc
Confidence                                 11100  1223467788999999996 6788999999999999987 555555444443


Q ss_pred             CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942        364 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD  443 (537)
Q Consensus       364 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~  443 (537)
                      .                                ++..             .+.++++ |++++|++++.|+.|+|||+++
T Consensus       249 ~--------------------------------~v~~-------------~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~  282 (325)
T d1pgua1         249 E--------------------------------PVQG-------------GIFALSW-LDSQKFATVGADATIRVWDVTT  282 (325)
T ss_dssp             B--------------------------------CCCS-------------CEEEEEE-SSSSEEEEEETTSEEEEEETTT
T ss_pred             c--------------------------------cccc-------------ceeeeec-cCCCEEEEEeCCCeEEEEECCC
Confidence            2                                1111             2233333 5789999999999999999999


Q ss_pred             ceeeeEeecCCcc--eEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy10942        444 YVCLKSLEGHDAS--VLRCHFINK-GTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       444 ~~~~~~~~~~~~~--v~~~~~s~~-~~~l~s~~~dg~v~vwd~  483 (537)
                      ++++..+..|...  +..+++.+. +.+|++++.||.|++||+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         283 SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            9999988776554  334444432 348999999999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=8.7e-29  Score=234.55  Aligned_cols=308  Identities=12%  Similarity=0.112  Sum_probs=199.5

Q ss_pred             eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceee-------eeccccccceeee-EeecCccccccCCcEEEEEeC
Q psy10942          3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-------SYPAYESLETCAV-FHLSDETESKSGGKTFVLAGG   74 (537)
Q Consensus         3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   74 (537)
                      ..|.+++++  +  ++++|++.|++|+|||.++.+...       ...+...+..+.. ...+.    ...+..++++++
T Consensus        15 ~~I~~v~~~--~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~   86 (393)
T d1sq9a_          15 ADIFSVSAC--N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIER----DAFELCLVATTS   86 (393)
T ss_dssp             SCEEEEEEC--S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEET----TTEEEEEEEEEE
T ss_pred             CccEEEEEe--C--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeecc----CCCCCcEEEEEe
Confidence            467888876  3  589999999999999987654321       1111111111111 11111    111445778899


Q ss_pred             ccceEEeeeccceehhhhcC-----------CCcceEEEEEecc-----ccEEEEEeCCceEEEEecccccCcccccccc
Q psy10942         75 EKSLLHYYETSAVKELYQHG-----------LSSPLVRIVRSSV-----KRMYAVVTADHNISLYRLNSETGLEERPNKI  138 (537)
Q Consensus        75 ~~~~i~~wd~~~~~~~~~~~-----------~~~~v~~~~~s~~-----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~  138 (537)
                      .||.|++|++..........           ....+..+++.++     +.++++++.|+.+++|++...          
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~----------  156 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF----------  156 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS----------
T ss_pred             CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecC----------
Confidence            99999999987654322221           1146778888765     468999999999999998762          


Q ss_pred             cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc
Q psy10942        139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE  218 (537)
Q Consensus       139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~  218 (537)
                       ..       .  .......  ....+.....       .                                 ....   
T Consensus       157 -~~-------~--~~~~~~~--~~~~~~~~~~-------~---------------------------------~~~~---  181 (393)
T d1sq9a_         157 -AD-------E--SNSLTLN--WSPTLELQGT-------V---------------------------------ESPM---  181 (393)
T ss_dssp             -SS-------H--HHHTTTC--CCCEEEEEEE-------E---------------------------------CCSS---
T ss_pred             -Cc-------c--cceeeee--eccceecccc-------e---------------------------------eccc---
Confidence             10       1  1111111  1111111000       1                                 0011   


Q ss_pred             cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEE
Q psy10942        219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVK  298 (537)
Q Consensus       219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~  298 (537)
                        .+  ...+.++   +|+|++ +|++|+.|+.|+  +|++..+.                                .+.
T Consensus       182 --~~--~~~~~~v---~~s~dg-~lasgs~Dg~i~--iwd~~~~~--------------------------------~~~  219 (393)
T d1sq9a_         182 --TP--SQFATSV---DISERG-LIATGFNNGTVQ--ISELSTLR--------------------------------PLY  219 (393)
T ss_dssp             --SS--CCCCCEE---EECTTS-EEEEECTTSEEE--EEETTTTE--------------------------------EEE
T ss_pred             --CC--CCcEEEE---EECCCC-EEEEEeCCCcEE--EEeecccc--------------------------------ccc
Confidence              44  6678899   999997 888999999999  99887631                                122


Q ss_pred             EEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc---EEEEEccCCceeeEEEEecCCCCEEEEEcCCC
Q psy10942        299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT---VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       299 i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~  375 (537)
                      .+..          ...+.+|..+|++++|+|+|++|++|+.|++   |++||+. .++.+..+.....           
T Consensus       220 ~~~~----------~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~-~g~~~~~l~~~~~-----------  277 (393)
T d1sq9a_         220 NFES----------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE-FGERIGSLSVPTH-----------  277 (393)
T ss_dssp             EEEC----------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT-TCCEEEEECBC-------------
T ss_pred             cccc----------ccccccccceEEEcccccccceeeeecCCCCcceeeecccc-cceeeeeeccccc-----------
Confidence            2221          2335679999999999999999999998874   8999998 5566555543321           


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA  455 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  455 (537)
                              .......+.+|..                 .|++++|+|++++|++++.|++|++||+.+++++.++++|.+
T Consensus       278 --------~~~~~~~~~gH~~-----------------~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~  332 (393)
T d1sq9a_         278 --------SSQASLGEFAHSS-----------------WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD  332 (393)
T ss_dssp             --------------CCBSBSS-----------------CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred             --------cccceeeeecccC-----------------ceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCC
Confidence                    1222333445655                 788999999999999999999999999999999999999987


Q ss_pred             ceE----EEEEecCCCEEEEE
Q psy10942        456 SVL----RCHFINKGTQIVST  472 (537)
Q Consensus       456 ~v~----~~~~s~~~~~l~s~  472 (537)
                      .|.    .++|+|++..++++
T Consensus       333 ~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         333 DIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             GCSSGGGCCCBCTTSCBCSSC
T ss_pred             cccCCccEEEECCCCCEEEEc
Confidence            764    46677776665543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2.5e-29  Score=240.76  Aligned_cols=329  Identities=12%  Similarity=0.032  Sum_probs=234.4

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      ...++++...+|.|++||+.+++.+.++..+..+..++|||||++|++++.|++|++||+.+++..      ....+...
T Consensus        31 ~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~------~~~~i~~~  104 (426)
T d1hzua2          31 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT------KVAEIKIG  104 (426)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE------EEEEEECC
T ss_pred             CeEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee------EEEEEeCC
Confidence            445678889999999999999999999998889999999999999999999999999999984210      00112233


Q ss_pred             ecchhhhhhhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        146 VGFSDEILDIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      .+|.+.+.+++|+ ||+++++++. .+..    +                 ++||.       .+....  +.     +|
T Consensus       105 ~~~~~~~~s~~~s-pDG~~l~v~~~~~~~----v-----------------~i~d~-------~~~~~~~~~~-----~~  150 (426)
T d1hzua2         105 IEARSVESSKFKG-YEDRYTIAGAYWPPQ----F-----------------AIMDG-------ETLEPKQIVS-----TR  150 (426)
T ss_dssp             SEEEEEEECCSTT-CTTTEEEEEEEESSE----E-----------------EEEET-------TTCCEEEEEE-----CC
T ss_pred             CCCcceEEeeeec-CCCCEEEEeecCCCe----E-----------------EEEcC-------CccceeEEee-----cc
Confidence            4677788899999 7888776554 4444    8                 88998       777666  55     56


Q ss_pred             CCcCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        223 DELKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                        ...+...   .+.+++... +..+.|+...  ++....                                .+.+.+++
T Consensus       151 --~~~~~~~---~~~~~~~~~~i~~s~d~~~~--~~~~~~--------------------------------~~~i~~~~  191 (426)
T d1hzua2         151 --GMTVDTQ---TYHPEPRVAAIIASHEHPEF--IVNVKE--------------------------------TGKVLLVN  191 (426)
T ss_dssp             --EECSSSC---CEESCCCEEEEEECSSSSEE--EEEETT--------------------------------TTEEEEEE
T ss_pred             --CCCccce---eecCCCceeEEEECCCCCEE--EEecCC--------------------------------CCeEEEEE
Confidence              5556666   777777543 4455555554  443332                                34555555


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceeeEEEEecCC-------------C--
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLLNVLRGHKK-------------G--  365 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~-------------~--  365 (537)
                      .......    ......+...+..++|+|++++++++.. +..+.+++.. ..+.+........             .  
T Consensus       192 ~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (426)
T d1hzua2         192 YKDIDNL----TVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSK-DRRLSALVDVGKTPHPGRGANFVHPKYGP  266 (426)
T ss_dssp             CSSSSSC----EEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETT-TTEEEEEEECSSCCCCSCCEEEEETTTEE
T ss_pred             eccccce----eeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecc-cccEEEEeccCCcccccceeeeecCCCCc
Confidence            5544321    1122356677899999999998888764 5568888888 6666555543211             1  


Q ss_pred             CEEEEEcCCCcEEEEECCCC-------eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE-------Ee
Q psy10942        366 TQIVSTGADGLLKLWSIKTS-------TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS-------SS  431 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-------~~  431 (537)
                      ...+....++.+.+|+....       +....+.+|..                 .+..++|+||+++|++       ++
T Consensus       267 ~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~-----------------~v~~v~~sPdg~~l~v~~~~~~s~~  329 (426)
T d1hzua2         267 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG-----------------GSLFIKTHPKSSHLYVDTTFNPDAR  329 (426)
T ss_dssp             EEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSS-----------------CCCCEECCTTCSEEEECCTTCSSHH
T ss_pred             eEEeccCCCceEEEeeccccccccccceEeEEEecCCC-----------------ceeEEEcCCCCceEEEeecCCCCcc
Confidence            12234456888888887653       55666666655                 6777888888888884       44


Q ss_pred             CCCcEEEEECCCceeeeEee---------cCCcceEEEEEecCCCEEEEE-----eCCCcEEEEECCCCeeEEEecCC
Q psy10942        432 GDATIKLWCLTDYVCLKSLE---------GHDASVLRCHFINKGTQIVST-----GADGLLKLWSIKTSTCVSTFDKH  495 (537)
Q Consensus       432 ~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~-----~~dg~v~vwd~~~~~~~~~~~~~  495 (537)
                      .+++|++||+.+++...++.         .|...|..++|||||++++.+     +.++.|+|||.+++++...+.++
T Consensus       330 ~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~  407 (426)
T d1hzua2         330 ISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP  407 (426)
T ss_dssp             HHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             cCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCC
Confidence            57899999999987665542         355679999999999977543     35788999999999999888765

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=1.6e-30  Score=243.80  Aligned_cols=336  Identities=9%  Similarity=0.017  Sum_probs=233.3

Q ss_pred             eeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCcc--ceEEeeecc
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK--SLLHYYETS   85 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~wd~~   85 (537)
                      -+||| .||+++++++. |.|++||++.++.++ +.+...+..+  .++|        ++++|++++.+  ..|++||++
T Consensus         8 ~~fSP-~dG~~~a~~~~-g~v~v~d~~~~~~~~-~~~~~~v~~~--~~sp--------Dg~~l~~~~~~~g~~v~v~d~~   74 (360)
T d1k32a3           8 EDFSP-LDGDLIAFVSR-GQAFIQDVSGTYVLK-VPEPLRIRYV--RRGG--------DTKVAFIHGTREGDFLGIYDYR   74 (360)
T ss_dssp             EEEEE-CGGGCEEEEET-TEEEEECTTSSBEEE-CSCCSCEEEE--EECS--------SSEEEEEEEETTEEEEEEEETT
T ss_pred             ccccC-CCCCEEEEEEC-CeEEEEECCCCcEEE-ccCCCCEEEE--EECC--------CCCEEEEEEcCCCCEEEEEECC
Confidence            46893 29999999875 679999998877655 5677777777  6788        66777765544  379999999


Q ss_pred             ceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         86 AVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        86 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                      +++......+...|.+++|+|||++|++++.++.+++|++.+           .+....+..|...+.+++|+ +++++|
T Consensus        75 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~s-pdg~~l  142 (360)
T d1k32a3          75 TGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-----------GKPTVIERSREAMITDFTIS-DNSRFI  142 (360)
T ss_dssp             TCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCEEEEEECSSSCCCCEEEC-TTSCEE
T ss_pred             CCcEEEeeCCCceEEeeeecccccccceeccccccccccccc-----------cceeeeeecccccccchhhc-cceeee
Confidence            988877777778999999999999999999999999999998           67788888899999999999 788888


Q ss_pred             EEeeeccc------cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc
Q psy10942        166 VVASNEYL------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       166 ~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      +.+.....      ..+.+                 ++|+.       .+++.. +.     .+  ...+..+   +|+|
T Consensus       143 a~~~~~~~~~~~~~~~~~~-----------------~v~d~-------~~~~~~~~~-----~~--~~~~~~~---~~sp  188 (360)
T d1k32a3         143 AYGFPLKHGETDGYVMQAI-----------------HVYDM-------EGRKIFAAT-----TE--NSHDYAP---AFDA  188 (360)
T ss_dssp             EEEEEECSSTTCSCCEEEE-----------------EEEET-------TTTEEEECS-----CS--SSBEEEE---EECT
T ss_pred             eeeccccccceeeccccce-----------------eeecc-------ccCceeeec-----cc--ccccccc---cccC
Confidence            76654432      01123                 67887       666655 55     66  7788889   9999


Q ss_pred             CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942        239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG  318 (537)
Q Consensus       239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~  318 (537)
                      +|++|++++.++.+.  +|+.........                         ....+..                ...
T Consensus       189 dg~~l~~~s~~~~~~--~~d~~~~~~~~~-------------------------~~~~~~~----------------~~~  225 (360)
T d1k32a3         189 DSKNLYYLSYRSLDP--SPDRVVLNFSFE-------------------------VVSKPFV----------------IPL  225 (360)
T ss_dssp             TSCEEEEEESCCCCC--EECSSSSCEECC-------------------------SCBEEEE----------------EES
T ss_pred             CCCEEEEEeCCCceE--cccccccceeec-------------------------cccceEE----------------Eec
Confidence            999999999999999  998765210000                         0001111                111


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCc---EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKT---VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~---i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      |...+..+.|+|++..++++..+..   .++|.+.........+..+++                               
T Consensus       226 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  274 (360)
T d1k32a3         226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES-------------------------------  274 (360)
T ss_dssp             STTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSS-------------------------------
T ss_pred             ccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCC-------------------------------
Confidence            2223334456666655544332211   112222211111111111111                               


Q ss_pred             cceEEEEEecCCCceEEeeeeEEE---EcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVN---FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~---~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                                        .+..+.   +++++.++++++.++.|++||+.+++.    ..|.+.|.+++|||||++|+++
T Consensus       275 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~~~~v~~~~~SpDG~~l~~~  332 (360)
T d1k32a3         275 ------------------SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVR  332 (360)
T ss_dssp             ------------------EEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----EEEEEEEEEEEECTTSCEEEEE
T ss_pred             ------------------CceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE----EEecCCcCEEEECCCCCEEEEE
Confidence                              122222   233345677888899999999988654    2344569999999999999999


Q ss_pred             eCCCcEEEEECCCCeeEEEecCCccc
Q psy10942        473 GADGLLKLWSIKTSTCVSTFDKHALK  498 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~~~~~~  498 (537)
                      +.||.|++||+++++...++..+..+
T Consensus       333 ~~Dg~i~v~d~~~~~~~~~~~~d~~~  358 (360)
T d1k32a3         333 KDDGKIYTFPLEKPEDERTVETDKRP  358 (360)
T ss_dssp             ETTSCEEEEESSCTTSCEECCCCSSC
T ss_pred             ECCCeEEEEECCCCCcceEEEecccc
Confidence            99999999999999887777655444

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.1e-28  Score=223.26  Aligned_cols=253  Identities=11%  Similarity=0.064  Sum_probs=196.2

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      ||  ..+|+++   +|+|    |++|+.||+|+  +|++......    ....+..+.....   ..+++++.|+++++|
T Consensus        11 gH--~~~I~~l---~~s~----l~sgs~Dg~v~--~Wd~~~~~~~----h~~~V~~~~~~~~---~~~~s~s~D~~v~~w   72 (287)
T d1pgua2          11 GH--NKGITAL---TVNP----LISGSYDGRIM--EWSSSSMHQD----HSNLIVSLDNSKA---QEYSSISWDDTLKVN   72 (287)
T ss_dssp             CC--SSCEEEE---ETTT----TEEEETTSCEE--ETTTTEEECC----CCSCEEEEECCST---TCCEEEETTTEEEET
T ss_pred             CC--CCceEEE---EECc----EEEEeCCCeEE--EEECCCCCCC----CCCCEEEEEecCC---CeEEEEeeccccccc
Confidence            99  9999999   9987    99999999999  9998763211    1111222222222   467899999999999


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec-------CCCCEEEEEcC
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH-------KKGTQIVSTGA  373 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~l~~~~~  373 (537)
                      +....+            ....+..+.+++++..++++ .++.+.+|+.. ....+..+..+       +.+..+++++.
T Consensus        73 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  138 (287)
T d1pgua2          73 GITKHE------------FGSQPKVASANNDGFTAVLT-NDDDLLILQSF-TGDIIKSVRLNSPGSAVSLSQNYVAVGLE  138 (287)
T ss_dssp             TEEEEE------------CSSCEEEEEECSSSEEEEEE-TTSEEEEEETT-TCCEEEEEECSSCEEEEEECSSEEEEEET
T ss_pred             cccccc------------cccceeeeeeccCCceEEEe-ecccceeeecc-ceeeeeeccccceeeeeeccCcceeeecc
Confidence            975432            23457788999888776665 56678899887 55555555433       34566766666


Q ss_pred             C-CcEEEEECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee-Ee
Q psy10942        374 D-GLLKLWSIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK-SL  450 (537)
Q Consensus       374 d-~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~  450 (537)
                      + +.+++|++...+....+.. +..                 .+++++|+|++.+|++|+.||.|++||+.+++... .+
T Consensus       139 ~~~~v~~~~~~~~~~~~~~~~~~~~-----------------~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~  201 (287)
T d1pgua2         139 EGNTIQVFKLSDLEVSFDLKTPLRA-----------------KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW  201 (287)
T ss_dssp             TTSCEEEEETTEEEEEEECSSCCSS-----------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS
T ss_pred             ccceeeeeeccccceeeeeeeccCC-----------------ceeEEEeccCccccccccccccccceeecccccccccc
Confidence            5 5799999987665555433 222                 78899999999999999999999999999987654 46


Q ss_pred             ecCCcceEEEEEecC----------CCEEEEEeCCCcEEEEECCC-CeeEEEecCCccceeccCCCCCCccccccceeee
Q psy10942        451 EGHDASVLRCHFINK----------GTQIVSTGADGLLKLWSIKT-STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCS  519 (537)
Q Consensus       451 ~~~~~~v~~~~~s~~----------~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  519 (537)
                      .+|...|.+++|+|+          +.+|++|+.|++|++||+++ ++.+..+.+|...|           +++   +|+
T Consensus       202 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V-----------~~v---~~~  267 (287)
T d1pgua2         202 AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV-----------NNL---LWE  267 (287)
T ss_dssp             CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE-----------EEE---EEE
T ss_pred             cccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCe-----------EEE---EEC
Confidence            789999999999874          46899999999999999976 56778888999999           999   999


Q ss_pred             cCCCEEEEEeCCCCEEeC
Q psy10942        520 RNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       520 ~~~~~l~s~~~dg~i~vW  537 (537)
                      |++ .|++++.|+.|++|
T Consensus       268 ~~~-~l~s~g~D~~v~iW  284 (287)
T d1pgua2         268 TPS-TLVSSGADACIKRW  284 (287)
T ss_dssp             ETT-EEEEEETTSCEEEE
T ss_pred             CCC-EEEEEECCCeEEEE
Confidence            986 58899999999999

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.4e-29  Score=229.30  Aligned_cols=281  Identities=14%  Similarity=0.110  Sum_probs=201.5

Q ss_pred             eehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE
Q psy10942         87 VKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI  165 (537)
Q Consensus        87 ~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  165 (537)
                      .+.++++++| ++|++++|+|    |++|+.||+|++||+.+           .     ..+|...|.+++|+ + +..+
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~-----------~-----~~~h~~~V~~~~~~-~-~~~~   60 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----------M-----HQDHSNLIVSLDNS-K-AQEY   60 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE-----------E-----ECCCCSCEEEEECC-S-TTCC
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC-----------C-----CCCCCCCEEEEEec-C-CCeE
Confidence            4667778866 6999999998    99999999999999887           2     25788899999998 4 4556


Q ss_pred             EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942        166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPR  245 (537)
Q Consensus       166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~  245 (537)
                      ++++.++.    +                 ++|+.       ...+          .  ...+.++   .+++++..+++
T Consensus        61 ~s~s~D~~----v-----------------~~w~~-------~~~~----------~--~~~~~~~---~~~~~~~~~~~   97 (287)
T d1pgua2          61 SSISWDDT----L-----------------KVNGI-------TKHE----------F--GSQPKVA---SANNDGFTAVL   97 (287)
T ss_dssp             EEEETTTE----E-----------------EETTE-------EEEE----------C--SSCEEEE---EECSSSEEEEE
T ss_pred             EEEeeccc----c-----------------ccccc-------cccc----------c--ccceeee---eeccCCceEEE
Confidence            67776666    8                 99988       4321          2  3346677   78888877777


Q ss_pred             ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC-CeEEEEECCCCceeeeeecccccccCCCeE
Q psy10942        246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD-KTVKVWSTTGGLKLLNVLRGHKKGHEKDIN  324 (537)
Q Consensus       246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~  324 (537)
                      +..+ .+.  +|+...+..........+..  ..+...  ..+++++.+ +.+++|++.......    .....|...++
T Consensus        98 ~~~~-~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~v~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~v~  166 (287)
T d1pgua2          98 TNDD-DLL--ILQSFTGDIIKSVRLNSPGS--AVSLSQ--NYVAVGLEEGNTIQVFKLSDLEVSF----DLKTPLRAKPS  166 (287)
T ss_dssp             ETTS-EEE--EEETTTCCEEEEEECSSCEE--EEEECS--SEEEEEETTTSCEEEEETTEEEEEE----ECSSCCSSCEE
T ss_pred             eecc-cce--eeeccceeeeeeccccceee--eeeccC--cceeeeccccceeeeeeccccceee----eeeeccCCcee
Confidence            6654 566  77766643221111111111  111111  355555555 579999987655432    22345778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +++|+|++.+|++++.||.|++||+. .....                               ...+..|..++.+++++
T Consensus       167 ~~~~s~~~~~l~~g~~dg~i~i~d~~-~~~~~-------------------------------~~~~~~h~~~v~~~~~~  214 (287)
T d1pgua2         167 YISISPSETYIAAGDVMGKILLYDLQ-SREVK-------------------------------TSRWAFRTSKINAISWK  214 (287)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETT-TTEEE-------------------------------ECCSCCCSSCEEEEEEC
T ss_pred             EEEeccCccccccccccccccceeec-ccccc-------------------------------cccccccccccceeeec
Confidence            99999999999999999999999987 32211                               11234567778888888


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI  483 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~  483 (537)
                      |.+.       ....+.+++.+|++|+.|+.|++||+++ .+.+..+.+|.+.|++++|+|++ .|++++.|+.|++|++
T Consensus       215 p~~~-------~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         215 PAEK-------GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             CCC-------------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cccc-------ccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            8743       3455677889999999999999999976 56677788999999999999986 6899999999999985

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.9e-27  Score=214.11  Aligned_cols=255  Identities=25%  Similarity=0.414  Sum_probs=198.9

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc----eEEEEEeCC
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV----ELLASGSLD  294 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v----~~l~~~~~d  294 (537)
                      .|  ...|+|+   +|  ++++|++|+.||+|+  +||+.+++    +     ...+.+|..  .++    ++|++|+.|
T Consensus        13 ~~--~~~V~c~---~~--d~~~l~sgs~Dg~i~--vWd~~~~~----~-----~~~l~~H~~~V~~v~~~~~~l~s~s~D   74 (293)
T d1p22a2          13 ET--SKGVYCL---QY--DDQKIVSGLRDNTIK--IWDKNTLE----C-----KRILTGHTGSVLCLQYDERVIITGSSD   74 (293)
T ss_dssp             SS--CCCEEEE---EC--CSSEEEEEESSSCEE--EEESSSCC----E-----EEEECCCSSCEEEEECCSSEEEEEETT
T ss_pred             CC--CCCEEEE---EE--cCCEEEEEeCCCeEE--EEECCCCc----E-----EEEEecCCCCEeeeecccceeeccccc
Confidence            67  8889998   65  789999999999999  99998743    2     444455554  122    689999999


Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee--EEEEecC--------C
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL--NVLRGHK--------K  364 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~--------~  364 (537)
                      +.|++|++..+......     ..+..  ....+.+....++++..++.+.+|+........  ..+..|.        .
T Consensus        75 ~~i~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  147 (293)
T d1p22a2          75 STVRVWDVNTGEMLNTL-----IHHCE--AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD  147 (293)
T ss_dssp             SCEEEEESSSCCEEEEE-----CCCCS--CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE
T ss_pred             ccccccccccccccccc-----ccccc--ccccccccccceeecccccceeEeeccccccccccccccccccccccceec
Confidence            99999999988764322     22222  233455667789999999999999988433222  2222222        2


Q ss_pred             CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942        365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY  444 (537)
Q Consensus       365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  444 (537)
                      ...+++++.|+.+++||.++++.+..+..+...                 +..+.+  ++.++++++.||.|++||+.+.
T Consensus       148 ~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~-----------------v~~~~~--~~~~l~~~~~dg~i~i~d~~~~  208 (293)
T d1p22a2         148 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-----------------IACLQY--RDRLVVSGSSDNTIRLWDIECG  208 (293)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----------------EEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred             ccccccccCCCceeeecCCCCcEEEEEcccccc-----------------cccccC--CCCeEEEecCCCEEEEEecccc
Confidence            567888999999999999999999888877653                 333333  3568999999999999999999


Q ss_pred             eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC---------CeeEEEecCCccceeccCCCCCCccccccc
Q psy10942        445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT---------STCVSTFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                      +.+..+.+|...+..  +++++.+|++++.||.|++||+.+         ...+..+.+|...|           +++  
T Consensus       209 ~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V-----------~~v--  273 (293)
T d1p22a2         209 ACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV-----------FRL--  273 (293)
T ss_dssp             CEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC-----------CCE--
T ss_pred             eeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCE-----------EEE--
Confidence            999999998888764  567888999999999999999643         35678889999999           888  


Q ss_pred             eeeecCCCEEEEEeCCCCEEeC
Q psy10942        516 QLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       516 ~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                       +|  ++++|+|++.||+|+||
T Consensus       274 -~~--d~~~l~s~s~Dg~i~iW  292 (293)
T d1p22a2         274 -QF--DEFQIVSSSHDDTILIW  292 (293)
T ss_dssp             -EE--CSSCEEECCSSSEEEEE
T ss_pred             -EE--cCCEEEEEecCCEEEEe
Confidence             88  57789999999999999

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.8e-29  Score=231.23  Aligned_cols=316  Identities=13%  Similarity=0.059  Sum_probs=210.3

Q ss_pred             hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942         90 LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA  168 (537)
Q Consensus        90 ~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  168 (537)
                      +...+.| +.|++|+|+|++++||+|+.|++|+|||+.+...        ........+|...|.+++|+|+++..++++
T Consensus         4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~--------~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg   75 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSLRYKHPLLCCNFIDNTDLQIYVG   75 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------EEEEEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred             EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCc--------ceEEEEecCCCCCEEEEEEeCCCCCEEEEc
Confidence            3444444 6899999999999999999999999999987311        122334446999999999996566677777


Q ss_pred             eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942        169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ  246 (537)
Q Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~  246 (537)
                      +.++.    +                 ++|+.       ......  ..    ..+  .......   .+.++...++++
T Consensus        76 ~~d~~----v-----------------~~w~~-------~~~~~~~~~~----~~~--~~~~~~~---~~~~~~~~~~~~  118 (342)
T d1yfqa_          76 TVQGE----I-----------------LKVDL-------IGSPSFQALT----NNE--ANLGICR---ICKYGDDKLIAA  118 (342)
T ss_dssp             ETTSC----E-----------------EEECS-------SSSSSEEECB----SCC--CCSCEEE---EEEETTTEEEEE
T ss_pred             ccccc----e-----------------eeeec-------cccccccccc----ccc--ccccccc---cccccccccccc
Confidence            77766    9                 99998       655544  22    022  3333444   567788899999


Q ss_pred             cCCCcceeccccccCCCcccccccccccceeeeeeC----------CcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942        247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG----------GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK  316 (537)
Q Consensus       247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~  316 (537)
                      +.++.++  +|++.........     ......+..          ..-..+++++.|+.|++|++.........  ...
T Consensus       119 ~~~~~~~--~wd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~--~~~  189 (342)
T d1yfqa_         119 SWDGLIE--VIDPRNYGDGVIA-----VKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT--IEE  189 (342)
T ss_dssp             ETTSEEE--EECHHHHTTBCEE-----EEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCE--EEE
T ss_pred             ccccccc--eeeccccccceee-----ecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCccccee--eee
Confidence            9999999  9998764322221     111111100          01157899999999999999876643322  112


Q ss_pred             cccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942        317 KGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  395 (537)
Q Consensus       317 ~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  395 (537)
                      ..+...+.+..+.+ ++..+++++.||.+.+|+..........     ..           ...+.  ..........|.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~-----~~-----------~~~~~--~~~~~~~~~~~~  251 (342)
T d1yfqa_         190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS-----SK-----------RFAFR--CHRLNLKDTNLA  251 (342)
T ss_dssp             CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC-----TT-----------CEEEE--CCCCCTTCCSSC
T ss_pred             cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeec-----cc-----------cceee--eeeeccCCCccc
Confidence            23344556655554 6778999999999999988732211100     00           00000  000000011111


Q ss_pred             cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC
Q psy10942        396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                      .                 .+.+++|+|++++|++|+.||.|++||+.+++.+..+..+ ..+..++|+|++++|++++.|
T Consensus       252 ~-----------------~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sd  313 (342)
T d1yfqa_         252 Y-----------------PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSD  313 (342)
T ss_dssp             C-----------------CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEEC
T ss_pred             c-----------------cceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcC
Confidence            1                 6889999999999999999999999999999999888643 345568889999999999999


Q ss_pred             CcEEEEECCCCeeEEEecCCccce
Q psy10942        476 GLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +.+++|....    ..++.|...|
T Consensus       314 d~~~~~~~~~----~~~~~~~~~i  333 (342)
T d1yfqa_         314 DTFKTNAAID----QTIELNASSI  333 (342)
T ss_dssp             THHHHCSSSC----TTSCCCCCEE
T ss_pred             CcEEEeeeeC----CCccCCCCeE
Confidence            9888886532    2344455555

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.96  E-value=2.3e-29  Score=235.71  Aligned_cols=316  Identities=9%  Similarity=0.003  Sum_probs=223.0

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCc--eEEEEecccccCcccccccccceeE
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADH--NISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      +++++++++ +|.|++||+.++..++ +.+.+.|.+++|||||++|++++.+.  .|++||..+           ++ .+
T Consensus        14 dG~~~a~~~-~g~v~v~d~~~~~~~~-~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~-----------~~-~~   79 (360)
T d1k32a3          14 DGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-----------GK-AE   79 (360)
T ss_dssp             GGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-----------CC-EE
T ss_pred             CCCEEEEEE-CCeEEEEECCCCcEEE-ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC-----------Cc-EE
Confidence            667787776 6789999998877665 45668999999999999998877553  799999988           33 45


Q ss_pred             EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc
Q psy10942        144 QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG  221 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~  221 (537)
                      .+..|...+.+++|+ |++++|++++.+..    +                 ++|+.       .+.+..  +.     .
T Consensus        80 ~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~----~-----------------~~~~~-------~~~~~~~~~~-----~  125 (360)
T d1k32a3          80 KFEENLGNVFAMGVD-RNGKFAVVANDRFE----I-----------------MTVDL-------ETGKPTVIER-----S  125 (360)
T ss_dssp             ECCCCCCSEEEEEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TTCCEEEEEE-----C
T ss_pred             EeeCCCceEEeeeec-ccccccceeccccc----c-----------------ccccc-------cccceeeeee-----c
Confidence            677899999999999 78899988888777    8                 89998       777665  55     7


Q ss_pred             CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                      |  ...+.++   +|+|+|++|+.+..+....  .+..                                 .++.+++|+
T Consensus       126 ~--~~~~~~~---~~spdg~~la~~~~~~~~~--~~~~---------------------------------~~~~~~v~d  165 (360)
T d1k32a3         126 R--EAMITDF---TISDNSRFIAYGFPLKHGE--TDGY---------------------------------VMQAIHVYD  165 (360)
T ss_dssp             S--SSCCCCE---EECTTSCEEEEEEEECSST--TCSC---------------------------------CEEEEEEEE
T ss_pred             c--cccccch---hhccceeeeeeeccccccc--eeec---------------------------------cccceeeec
Confidence            7  8889999   9999999999776555443  3222                                 235788999


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                      ..+++.      .....+...+..++|+|+|+.|++++.++.+.+|+.... ...    .                    
T Consensus       166 ~~~~~~------~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~-~~~----~--------------------  214 (360)
T d1k32a3         166 MEGRKI------FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL-NFS----F--------------------  214 (360)
T ss_dssp             TTTTEE------EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS-CEE----C--------------------
T ss_pred             cccCce------eeecccccccccccccCCCCEEEEEeCCCceEccccccc-cee----e--------------------
Confidence            988764      233456778899999999999999999999999987621 110    0                    


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeEeecCCcc
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKSLEGHDAS  456 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~  456 (537)
                       ........+..+..                 ....+.|++++..++++..+     ..+..++...+.. ..+..+.+.
T Consensus       215 -~~~~~~~~~~~~~~-----------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  275 (360)
T d1k32a3         215 -EVVSKPFVIPLIPG-----------------SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESS  275 (360)
T ss_dssp             -CSCBEEEEEESSTT-----------------CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSE
T ss_pred             -ccccceEEEecccC-----------------ccccceECCCcCcccccceeecccccceeecccCcCce-eEeeecCCC
Confidence             00001111111111                 12223345555444443322     1233444444432 334445555


Q ss_pred             eEEEEEecCC---CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942        457 VLRCHFINKG---TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ  533 (537)
Q Consensus       457 v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~  533 (537)
                      +..+.+.+.+   .++++++.++.+++||+.+++..    .|...+           .++   +|||||++|++++.||.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v-----------~~~---~~SpDG~~l~~~~~Dg~  337 (360)
T d1k32a3         276 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNL-----------TDL---RLSADRKTVMVRKDDGK  337 (360)
T ss_dssp             EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEE-----------EEE---EECTTSCEEEEEETTSC
T ss_pred             ceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCc-----------CEE---EECCCCCEEEEEECCCe
Confidence            6666655543   46788889999999999887653    234567           788   99999999999999999


Q ss_pred             EEeC
Q psy10942        534 VVVY  537 (537)
Q Consensus       534 i~vW  537 (537)
                      |++|
T Consensus       338 i~v~  341 (360)
T d1k32a3         338 IYTF  341 (360)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9998

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-27  Score=215.45  Aligned_cols=269  Identities=23%  Similarity=0.366  Sum_probs=207.1

Q ss_pred             ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc
Q psy10942        140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT  217 (537)
Q Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~  217 (537)
                      +.++....|...|+|++|   ++++|++++.|+.    |                 ++||+       +++++.  +.  
T Consensus         6 ~~i~~~~~~~~~V~c~~~---d~~~l~sgs~Dg~----i-----------------~vWd~-------~~~~~~~~l~--   52 (293)
T d1p22a2           6 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNT----I-----------------KIWDK-------NTLECKRILT--   52 (293)
T ss_dssp             CCEECCCSSCCCEEEEEC---CSSEEEEEESSSC----E-----------------EEEES-------SSCCEEEEEC--
T ss_pred             EEEeccCCCCCCEEEEEE---cCCEEEEEeCCCe----E-----------------EEEEC-------CCCcEEEEEe--
Confidence            344455667777887665   4788988888877    9                 99999       888777  77  


Q ss_pred             ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942        218 ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV  297 (537)
Q Consensus       218 ~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i  297 (537)
                         +|  ...|.++   +|  ++++|++++.|+.++  +|++..+.............. .  .......++++..++.+
T Consensus        53 ---~H--~~~V~~v---~~--~~~~l~s~s~D~~i~--~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~  117 (293)
T d1p22a2          53 ---GH--TGSVLCL---QY--DERVIITGSSDSTVR--VWDVNTGEMLNTLIHHCEAVL-H--LRFNNGMMVTCSKDRSI  117 (293)
T ss_dssp             ---CC--SSCEEEE---EC--CSSEEEEEETTSCEE--EEESSSCCEEEEECCCCSCEE-E--EECCTTEEEEEETTSCE
T ss_pred             ---cC--CCCEeee---ec--ccceeeccccccccc--ccccccccccccccccccccc-c--ccccccceeecccccce
Confidence               99  9999999   76  678999999999999  999988543222211110000 0  00111578999999999


Q ss_pred             EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC--------CCEEE
Q psy10942        298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIV  369 (537)
Q Consensus       298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~l~  369 (537)
                      .+|+.........  ......|...+..+.+.+  ..+++++.|+.+++||+. ..+.+..+..+..        +..++
T Consensus       118 ~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~l~  192 (293)
T d1p22a2         118 AVWDMASPTDITL--RRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTS-TCEFVRTLNGHKRGIACLQYRDRLVV  192 (293)
T ss_dssp             EEEECSSSSCCEE--EEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEEETTEEE
T ss_pred             eEeeccccccccc--cccccccccccccceecc--cccccccCCCceeeecCC-CCcEEEEEcccccccccccCCCCeEE
Confidence            9999987654322  334567888888887764  578889999999999999 6667766665543        67899


Q ss_pred             EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC------
Q psy10942        370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD------  443 (537)
Q Consensus       370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~------  443 (537)
                      +++.|+.|++||+++.+.+..+..+...+                 .  .+++++.+|++|+.||.|++||+..      
T Consensus       193 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-----------------~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~  253 (293)
T d1p22a2         193 SGSSDNTIRLWDIECGACLRVLEGHEELV-----------------R--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRA  253 (293)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSCE-----------------E--EEECCSSEEEEEETTSCEEEEEHHHHTSTTS
T ss_pred             EecCCCEEEEEecccceeeeeecccceee-----------------e--eccccceEEEEEcCCCEEEEEECCCCccccc
Confidence            99999999999999999988887776532                 2  3556788999999999999999753      


Q ss_pred             ---ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942        444 ---YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS  482 (537)
Q Consensus       444 ---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd  482 (537)
                         ...+..+.+|.+.|++++|+  +++|++++.||+|++||
T Consensus       254 ~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         254 PAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             cCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence               34678889999999999984  56899999999999997

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.7e-27  Score=219.29  Aligned_cols=273  Identities=10%  Similarity=0.034  Sum_probs=196.1

Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc----cccccceeeeeeCCcceEEEEEeCCCe
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI----FVPEAEHGAFYTGGTVELLASGSLDKT  296 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~l~~~~~d~~  296 (537)
                      +|  .+.|+++   +|+|++++|++++.||+|+  +|++..........    ...++..+.+..... ..+++|+.|+.
T Consensus         9 ~h--~d~I~~l---~fsp~~~~L~s~s~Dg~v~--iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~-~~l~sg~~d~~   80 (342)
T d1yfqa_           9 AP--KDYISDI---KIIPSKSLLLITSWDGSLT--VYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD-LQIYVGTVQGE   80 (342)
T ss_dssp             CC--SSCEEEE---EEEGGGTEEEEEETTSEEE--EEEEETTTTEEEEEEEEECSSCEEEEEEEESSS-EEEEEEETTSC
T ss_pred             CC--CCCEEEE---EEeCCCCEEEEEECCCeEE--EEEccCCCcceEEEEecCCCCCEEEEEEeCCCC-CEEEEcccccc
Confidence            89  9999999   9999999999999999999  99997754322221    111222233322211 58999999999


Q ss_pred             EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE---------------EEe
Q psy10942        297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV---------------LRG  361 (537)
Q Consensus       297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---------------~~~  361 (537)
                      |++|+..........    ...+........+.++...+++++.|+.+++||++........               +..
T Consensus        81 v~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (342)
T d1yfqa_          81 ILKVDLIGSPSFQAL----TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM  156 (342)
T ss_dssp             EEEECSSSSSSEEEC----BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEE
T ss_pred             eeeeecccccccccc----cccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeee
Confidence            999999887654322    2233444556667778899999999999999998632211111               122


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeeec---cCCcceEEEEEecCCCceEEeeeeEEE-EcCCCCEEEEEeCCCcEE
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFD---KHALKIWTLAITKDENQIITGGVWFVN-FSPLDRILISSSGDATIK  437 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~  437 (537)
                      ...+..+++++.|+.+++||+...+......   ....                 ...+.. +++++..+++++.||.+.
T Consensus       157 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~s~dg~~~  219 (342)
T d1yfqa_         157 DTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY-----------------QIRDVALLPKEQEGYACSSIDGRVA  219 (342)
T ss_dssp             EECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSS-----------------CEEEEEECSGGGCEEEEEETTSEEE
T ss_pred             eccCCceeeecCCCcEEEEecccCcccceeeeeccccc-----------------ceeeeEeecCCCCEEEeecCCCeEE
Confidence            3347789999999999999998765433321   1111                 233333 445678899999999999


Q ss_pred             EEECCCceee---------------eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceecc
Q psy10942        438 LWCLTDYVCL---------------KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNS  502 (537)
Q Consensus       438 i~d~~~~~~~---------------~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~  502 (537)
                      +|+.......               .....|...|++++|+|++++||+|+.||.|++||+++++.+..+..+. ..   
T Consensus       220 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-~~---  295 (342)
T d1yfqa_         220 VEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-ED---  295 (342)
T ss_dssp             EEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SS---
T ss_pred             EEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC-CC---
Confidence            9987642211               1123466789999999999999999999999999999999998886543 23   


Q ss_pred             CCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942        503 DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY  537 (537)
Q Consensus       503 ~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW  537 (537)
                              ..+   +|+|++++|++++.|+.+++|
T Consensus       296 --------~~~---~~s~~~~~l~~a~sdd~~~~~  319 (342)
T d1yfqa_         296 --------SVV---KIACSDNILCLATSDDTFKTN  319 (342)
T ss_dssp             --------EEE---EEEECSSEEEEEEECTHHHHC
T ss_pred             --------EEE---EEEeCCCEEEEEEcCCcEEEe
Confidence                    446   899999999999888876655

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.95  E-value=1.1e-27  Score=228.42  Aligned_cols=337  Identities=11%  Similarity=-0.002  Sum_probs=225.5

Q ss_pred             CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942         66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      +..++++.+.+|.|.+||..+++++..+..+..+..++|||||++|++++.|+.+++||+.+++..      ....+...
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~------~~~~i~~~  104 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------TVAEIKIG  104 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------EEEEEECC
T ss_pred             CcEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce------EEEEEecC
Confidence            445679999999999999999999999988888999999999999999999999999999884210      01122333


Q ss_pred             ecchhhhhhhhcccCCCccEE-EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        146 VGFSDEILDIALLGEEDSHIV-VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       146 ~~~~~~v~~~~~~~~~~~~l~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      .+|.+.+.+.+|+ +|+++|+ ++..++.    +                 ++||.       .+++..  +.     .|
T Consensus       105 ~~~~~~~~s~~~S-pDG~~l~vs~~~~~~----v-----------------~i~d~-------~t~~~~~~~~-----~~  150 (432)
T d1qksa2         105 SEARSIETSKMEG-WEDKYAIAGAYWPPQ----Y-----------------VIMDG-------ETLEPKKIQS-----TR  150 (432)
T ss_dssp             SEEEEEEECCSTT-CTTTEEEEEEEETTE----E-----------------EEEET-------TTCCEEEEEE-----CC
T ss_pred             CCCCCeEEecccC-CCCCEEEEEcCCCCe----E-----------------EEEeC-------ccccceeeec-----cC
Confidence            4677778888999 7888764 4444555    8                 99999       777666  44     44


Q ss_pred             CCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        223 DELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                        ...+...   .+.++++..+ ..+.||..                                  ++++...++.|.+|+
T Consensus       151 --~~~~~~~---~~~~~~~~~~v~~s~dg~~----------------------------------~~vs~~~~~~i~~~d  191 (432)
T d1qksa2         151 --GMTYDEQ---EYHPEPRVAAILASHYRPE----------------------------------FIVNVKETGKILLVD  191 (432)
T ss_dssp             --EECTTTC---CEESCCCEEEEEECSSSSE----------------------------------EEEEETTTTEEEEEE
T ss_pred             --Cccccce---eccCCCceeEEEECCCCCE----------------------------------EEEEEccCCeEEEEE
Confidence              3333334   4455554433 22222222                                  233344456677777


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceeeEEEEecC-----C----------C
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLLNVLRGHK-----K----------G  365 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~-----~----------~  365 (537)
                      ..+.+.....    ...+...+.+++|+|+|+++++++. ++.+.++|.. ..+.+..+....     .          +
T Consensus       192 ~~~~~~~~~~----~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  266 (432)
T d1qksa2         192 YTDLNNLKTT----EISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK-EGKLVAIEDTGGQTPHPGRGANFVHPTFG  266 (432)
T ss_dssp             TTCSSEEEEE----EEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSSSBCCTTCEEEEETTTE
T ss_pred             ccCCCcceEE----EEcccCccccceECCCCCEEEEeccccceEEEeecc-cceEEEEeccCccccccCcccceecCCCC
Confidence            6655432111    1133456789999999998877765 4578888887 556555544321     1          2


Q ss_pred             CEEEEEc-CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe-------------------eeeEEEEcCCCC
Q psy10942        366 TQIVSTG-ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG-------------------GVWFVNFSPLDR  425 (537)
Q Consensus       366 ~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------~i~~~~~s~~~~  425 (537)
                      ....+.. .++.+.+|+.....    ...+...+....++|++..++.+                   ...++++ ||++
T Consensus       267 ~~~~~~~lg~~~v~~~~~~~~~----~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~  341 (432)
T d1qksa2         267 PVWATSHMGDDSVALIGTDPEG----HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIK  341 (432)
T ss_dssp             EEEEEEBSSSSEEEEEECCTTT----CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGG
T ss_pred             ceecccccCCceEEeccccccc----ccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-Eech
Confidence            2233332 37788888866542    12233344444444444333221                   1233554 8999


Q ss_pred             EEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEEecC
Q psy10942        426 ILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-----ADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      .+++++.|+.+++|++.++..   +..|...|.+++|||||++++.+.     .+|.|+|||..++++...+++
T Consensus       342 ~la~~s~d~~~k~w~~~~~~~---l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~  412 (432)
T d1qksa2         342 AMTGDGSDPEFKTLPIAEWAG---ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  412 (432)
T ss_dssp             GCCCSSSCCCEEEECHHHHHT---CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             hhcccccCCceEecccccccc---cCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecC
Confidence            999999999999999866533   335777899999999999886553     468899999999999888765

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=3e-27  Score=226.23  Aligned_cols=366  Identities=9%  Similarity=-0.037  Sum_probs=223.3

Q ss_pred             eeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942          9 DVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK   88 (537)
Q Consensus         9 ~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~   88 (537)
                      .+.+++..-++++.+.||.|++||+++++.+.+++..+.+..+  .++|        +++++++++.|+.|++||+.+++
T Consensus        25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~v--afSP--------DGk~l~~~~~d~~v~vwd~~t~~   94 (426)
T d1hzua2          25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS--RMSA--------SGRYLLVIGRDARIDMIDLWAKE   94 (426)
T ss_dssp             CSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSS
T ss_pred             cccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEE--EECC--------CCCEEEEEeCCCCEEEEEccCCc
Confidence            3442223335688899999999999999999999987777777  6688        77899999999999999999887


Q ss_pred             hhh--hcCCC----cceEEEEEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC
Q psy10942         89 ELY--QHGLS----SPLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE  161 (537)
Q Consensus        89 ~~~--~~~~~----~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  161 (537)
                      ...  ++...    +.+.+++|+|||++|+++ ..++.+++||..+           ..+...+.+|...+..++|.+..
T Consensus        95 ~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  163 (426)
T d1hzua2          95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-----------LEPKQIVSTRGMTVDTQTYHPEP  163 (426)
T ss_dssp             CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-----------CCEEEEEECCEECSSSCCEESCC
T ss_pred             eeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCc-----------cceeEEeeccCCCccceeecCCC
Confidence            533  22222    356677788999987555 4789999999999           78888888888888888887332


Q ss_pred             CccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCC
Q psy10942        162 DSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED  241 (537)
Q Consensus       162 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~  241 (537)
                      ....++.+.++.    .   +.........-   .+++.       ......  .....++  ...+..+   .|+|+++
T Consensus       164 ~~~~i~~s~d~~----~---~~~~~~~~~~i---~~~~~-------~~~~~~--~~~~~~~--~~~~~~~---~~~~~g~  219 (426)
T d1hzua2         164 RVAAIIASHEHP----E---FIVNVKETGKV---LLVNY-------KDIDNL--TVTSIGA--APFLADG---GWDSSHR  219 (426)
T ss_dssp             CEEEEEECSSSS----E---EEEEETTTTEE---EEEEC-------SSSSSC--EEEEEEC--CSSEEEE---EECTTSC
T ss_pred             ceeEEEECCCCC----E---EEEecCCCCeE---EEEEe-------ccccce--eeEEecc--CCccEee---eECCCCc
Confidence            223333333332    1   00000000000   11111       111111  0011256  6778889   9999999


Q ss_pred             eeeeccC-CCcceeccccccCCCcccccccc---cccceeeeeeC-CcceEEEEEeCCCeEEEEECCCCceee---eeec
Q psy10942        242 LFPRQSM-EPSTLEELEKRKTYHFPLFGIFV---PEAEHGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLL---NVLR  313 (537)
Q Consensus       242 ~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~---~~~~~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~---~~~~  313 (537)
                      +++++.. +..+.  +++.............   .+......... ......+..+.|+.+.+|+........   .. .
T Consensus       220 ~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~-~  296 (426)
T d1hzua2         220 YFMTAANNSNKVA--VIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK-V  296 (426)
T ss_dssp             EEEEEETTCSEEE--EEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSE-E
T ss_pred             EEEeeeeccccee--eeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceE-e
Confidence            8877654 45666  7877764322111000   00011111111 111334455678999999876542110   11 3


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEE-------eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASG-------SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~-------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      ..+.+|...+..++|+||+++|++.       ..|++|++||+.                                 +++
T Consensus       297 ~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~---------------------------------t~~  343 (426)
T d1hzua2         297 AELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK---------------------------------NLD  343 (426)
T ss_dssp             EEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETT---------------------------------CTT
T ss_pred             EEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECC---------------------------------CCC
Confidence            4567899999999999999999853       334556666655                                 333


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-----eCCCcEEEEECCCceeeeEeecCCcceEEEE
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-----SGDATIKLWCLTDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  461 (537)
                      ...++..+...    .-.+++    ...+.+++|||||++++..     +.++.|++||.++++....++++.      .
T Consensus       344 ~~~~~~~~~~~----~~~~~~----~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~------~  409 (426)
T d1hzua2         344 AKYQVLPIAEW----ADLGEG----AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR------L  409 (426)
T ss_dssp             SCCEEECHHHH----HCCCSS----CCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT------C
T ss_pred             cCeEEeccchh----cccCCC----CccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC------c
Confidence            22221100000    000000    0167788999999877543     357889999999999999888764      2


Q ss_pred             EecCCCEE
Q psy10942        462 FINKGTQI  469 (537)
Q Consensus       462 ~s~~~~~l  469 (537)
                      ++|+|++-
T Consensus       410 ~tp~Gk~~  417 (426)
T d1hzua2         410 ITPTGKFN  417 (426)
T ss_dssp             CSEEEEEE
T ss_pred             cCCCceEe
Confidence            35666653

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=1.3e-26  Score=220.96  Aligned_cols=349  Identities=9%  Similarity=-0.053  Sum_probs=233.4

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh--hhhcC
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE--LYQHG   94 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~   94 (537)
                      -++++.+.+|.|.+||.++++.++.++..+.+..+  .++|        +++++++++.|+.+++||+.+++.  +.++.
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v--~fSp--------DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~  102 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS--RLSA--------SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  102 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEE--EECC--------CCCEEEEEcCCCCEEEEEeeCCCceEEEEEe
Confidence            34688999999999999999999999977777777  6788        779999999999999999988764  23333


Q ss_pred             CC----cceEEEEEeccccEE-EEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc----------
Q psy10942         95 LS----SPLVRIVRSSVKRMY-AVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG----------  159 (537)
Q Consensus        95 ~~----~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------  159 (537)
                      ..    +.+.+.+|||||++| ++++.++.|++||..+           ++++..+..|...+..+.+.+          
T Consensus       103 ~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s  171 (432)
T d1qksa2         103 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-----------LEPKKIQSTRGMTYDEQEYHPEPRVAAILAS  171 (432)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-----------CCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred             cCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcc-----------ccceeeeccCCccccceeccCCCceeEEEEC
Confidence            22    355666778999986 6677899999999999           678888877766555444431          


Q ss_pred             CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc
Q psy10942        160 EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK  238 (537)
Q Consensus       160 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~  238 (537)
                      +++..++++..+ .  +.+                 .+|+.       ...+.. +.   ...+  ...+..+   +|+|
T Consensus       172 ~dg~~~~vs~~~-~--~~i-----------------~~~d~-------~~~~~~~~~---~i~~--g~~~~~~---~~sp  216 (432)
T d1qksa2         172 HYRPEFIVNVKE-T--GKI-----------------LLVDY-------TDLNNLKTT---EISA--ERFLHDG---GLDG  216 (432)
T ss_dssp             SSSSEEEEEETT-T--TEE-----------------EEEET-------TCSSEEEEE---EEEC--CSSEEEE---EECT
T ss_pred             CCCCEEEEEEcc-C--CeE-----------------EEEEc-------cCCCcceEE---EEcc--cCccccc---eECC
Confidence            333333322211 1  235                 66665       443322 11   0134  5567889   9999


Q ss_pred             CCCeeeeccCC-CcceeccccccCCCcccccccccccceeeeeeC---Ccc-eEEEEE-eCCCeEEEEECCCCceeeeee
Q psy10942        239 EEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG---GTV-ELLASG-SLDKTVKVWSTTGGLKLLNVL  312 (537)
Q Consensus       239 ~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~---~~v-~~l~~~-~~d~~i~i~~~~~~~~~~~~~  312 (537)
                      +|+++++++.+ ..+.  +++.....................+..   ... ....+. ..++.|.+|......      
T Consensus       217 dg~~~~va~~~~~~v~--v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~------  288 (432)
T d1qksa2         217 SHRYFITAANARNKLV--VIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG------  288 (432)
T ss_dssp             TSCEEEEEEGGGTEEE--EEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT------
T ss_pred             CCCEEEEeccccceEE--EeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc------
Confidence            99988776654 4666  777766422111100000000000000   000 222222 347889999876543      


Q ss_pred             cccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce---eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942        313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK---LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS  389 (537)
Q Consensus       313 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  389 (537)
                         ...|...+....++|++..+++++.+...++|+......   ....+. .+++..+++++.|+.+++||+.++..+ 
T Consensus       289 ---~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~-vpDg~~la~~s~d~~~k~w~~~~~~~l-  363 (432)
T d1qksa2         289 ---HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVA-VFDIKAMTGDGSDPEFKTLPIAEWAGI-  363 (432)
T ss_dssp             ---CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEE-EEEGGGCCCSSSCCCEEEECHHHHHTC-
T ss_pred             ---ccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEE-EEechhhcccccCCceEeccccccccc-
Confidence               245677899999999999999999999999998752111   111122 257888999999999999998655322 


Q ss_pred             eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-----CCCcEEEEECCCceeeeEeecC
Q psy10942        390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-----GDATIKLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~  453 (537)
                        ..+..                 .+.+++|||||++++.+.     .+|.|.|||.+++++...+++.
T Consensus       364 --~~~~~-----------------~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~~  413 (432)
T d1qksa2         364 --TEGQP-----------------RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE  413 (432)
T ss_dssp             --CSSCC-----------------EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             --CCCCC-----------------cEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecCC
Confidence              23333                 567788899998876554     4688999999999998888753

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.93  E-value=2.7e-23  Score=188.84  Aligned_cols=271  Identities=10%  Similarity=0.041  Sum_probs=195.0

Q ss_pred             EEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecch
Q psy10942         71 LAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS  149 (537)
Q Consensus        71 ~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  149 (537)
                      ++.+.++.|.+||+++++.+.++...+.+..++|+|||++|+ +++.++.|++||+.+           .+.+.++..+.
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t-----------~~~~~~~~~~~   74 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT-----------NNVIATVPAGS   74 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT-----------TEEEEEEECSS
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC-----------Cceeeeeeccc
Confidence            355778999999999999999998888899999999999875 556788999999999           67888888776


Q ss_pred             hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeE
Q psy10942        150 DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTV  228 (537)
Q Consensus       150 ~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v  228 (537)
                      . +..++|+ +++..++++....   ..+                 .+|+.       .+++.. .-     .+  ....
T Consensus        75 ~-~~~~~~~-~~~~~~~~~~~~~---~~~-----------------~~~~~-------~~~~~~~~~-----~~--~~~~  118 (301)
T d1l0qa2          75 S-PQGVAVS-PDGKQVYVTNMAS---STL-----------------SVIDT-------TSNTVAGTV-----KT--GKSP  118 (301)
T ss_dssp             S-EEEEEEC-TTSSEEEEEETTT---TEE-----------------EEEET-------TTTEEEEEE-----EC--SSSE
T ss_pred             c-ccccccc-ccccccccccccc---cee-----------------eeccc-------ccceeeeec-----cc--cccc
Confidence            5 6788999 5666554433222   226                 77877       666555 22     33  4556


Q ss_pred             EEEeccCcccCCCeeee-ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942        229 TLLERGKTVKEEDLFPR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK  307 (537)
Q Consensus       229 ~~~~~~~~s~~~~~l~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~  307 (537)
                      .++   .++|+++.++. +..++.+.  +|+...                                           ...
T Consensus       119 ~~~---~~~~dg~~~~~~~~~~~~~~--~~~~~~-------------------------------------------~~~  150 (301)
T d1l0qa2         119 LGL---ALSPDGKKLYVTNNGDKTVS--VINTVT-------------------------------------------KAV  150 (301)
T ss_dssp             EEE---EECTTSSEEEEEETTTTEEE--EEETTT-------------------------------------------TEE
T ss_pred             eEE---EeecCCCeeeeeecccccee--eeeccc-------------------------------------------cce
Confidence            778   89999887653 33444444  444443                                           332


Q ss_pred             eeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942        308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST  386 (537)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  386 (537)
                      ....      .+...+..++++|+++.++++..+ +.+.+|+.. ..........+.                       
T Consensus       151 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------------  200 (301)
T d1l0qa2         151 INTV------SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV-TNSVIDTVKVEA-----------------------  200 (301)
T ss_dssp             EEEE------ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECSS-----------------------
T ss_pred             eeec------ccCCCceEEEeeccccceeeeccccccccccccc-ceeeeecccccC-----------------------
Confidence            2111      123446889999999988888766 445555555 444333332211                       


Q ss_pred             eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942        387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLWCLTDYVCLKSLEGHDASVLRCHFI  463 (537)
Q Consensus       387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s  463 (537)
                                                 .+..++++++++.++++..   ++.|++||+.+++.+..+..+ ..+.+++|+
T Consensus       201 ---------------------------~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~s  252 (301)
T d1l0qa2         201 ---------------------------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVT  252 (301)
T ss_dssp             ---------------------------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEEC
T ss_pred             ---------------------------CcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEe
Confidence                                       5567888999988776643   468999999999998888754 567999999


Q ss_pred             cCCCEE-EEEeCCCcEEEEECCCCeeEEEecC
Q psy10942        464 NKGTQI-VSTGADGLLKLWSIKTSTCVSTFDK  494 (537)
Q Consensus       464 ~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~  494 (537)
                      |||++| ++++.|+.|++||+++++++.++..
T Consensus       253 pdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         253 PDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             CCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence            999987 5677899999999999999988864

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=2.5e-23  Score=192.28  Aligned_cols=283  Identities=8%  Similarity=-0.022  Sum_probs=201.7

Q ss_pred             cEEEEEeCCceEEEEecccccCcccccccccceeEEeecc--hhhhhhhhcccCCCccEEEe-eeccccCCcccceeecc
Q psy10942        109 RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF--SDEILDIALLGEEDSHIVVA-SNEYLNGGDLSGLVKLG  185 (537)
Q Consensus       109 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~-~~~~~~~~~i~~~~~~~  185 (537)
                      +||++++.|++|.+||+.+           .+.++.+..+  ...+.+++|+ ||+++++++ +.++.    |       
T Consensus         2 ~~~vt~~~d~~v~v~D~~s-----------~~~~~~i~~~~~~~~~~~i~~s-pDg~~l~v~~~~~~~----v-------   58 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEK-----------MAVDKVITIADAGPTPMVPMVA-PGGRIAYATVNKSES----L-------   58 (337)
T ss_dssp             EEEEEEETTTEEEEEETTT-----------TEEEEEEECTTCTTCCCCEEEC-TTSSEEEEEETTTTE----E-------
T ss_pred             eEEEEEcCCCEEEEEECCC-----------CeEEEEEECCCCCCCccEEEEC-CCCCEEEEEECCCCe----E-------
Confidence            5899999999999999999           7888888654  3457899999 777777544 34444    8       


Q ss_pred             cCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCC
Q psy10942        186 ANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYH  263 (537)
Q Consensus       186 ~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~  263 (537)
                                .+||+       .+++..  +.......+  ...+..+   +|+|++++++++..+....  .|....  
T Consensus        59 ----------~v~D~-------~t~~~~~~~~~~~~~~~--~~~~~~v---~~s~dg~~l~~~~~~~~~~--~~~~~~--  112 (337)
T d1pbyb_          59 ----------VKIDL-------VTGETLGRIDLSTPEER--VKSLFGA---ALSPDGKTLAIYESPVRLE--LTHFEV--  112 (337)
T ss_dssp             ----------EEEET-------TTCCEEEEEECCBTTEE--EECTTCE---EECTTSSEEEEEEEEEEEC--SSCEEE--
T ss_pred             ----------EEEEC-------CCCcEEEEEecCCCccc--ccceeeE---EEcCCCcEEEEeecCCcce--eeeccc--
Confidence                      99999       877766  331111122  2344567   8999999999888776666  555433  


Q ss_pred             cccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc
Q psy10942        264 FPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT  343 (537)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~  343 (537)
                                                   .+..+.+||..++......      .+...+..++|+|+|+++++++.  .
T Consensus       113 -----------------------------~~~~~~~~d~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~--~  155 (337)
T d1pbyb_         113 -----------------------------QPTRVALYDAETLSRRKAF------EAPRQITMLAWARDGSKLYGLGR--D  155 (337)
T ss_dssp             -----------------------------CCCEEEEEETTTTEEEEEE------ECCSSCCCEEECTTSSCEEEESS--S
T ss_pred             -----------------------------cccceeeccccCCeEEEec------cccCCceEEEEcCCCCEEEEEcC--C
Confidence                                         2467889999988764332      23456788999999999999864  4


Q ss_pred             EEEEEccCCceeeEEEEecCC---------CCEEE-EE-----------------------cCCCcEEEEECCCCeeeee
Q psy10942        344 VKVWSTTGGLKLLNVLRGHKK---------GTQIV-ST-----------------------GADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       344 i~i~d~~~~~~~~~~~~~~~~---------~~~l~-~~-----------------------~~d~~i~i~d~~~~~~~~~  390 (537)
                      +.+||.. ..+....+..+..         +..+. ..                       ..++.+.+||..+++.   
T Consensus       156 ~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  231 (337)
T d1pbyb_         156 LHVMDPE-AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---  231 (337)
T ss_dssp             EEEEETT-TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---
T ss_pred             cceeeee-cCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE---
Confidence            7889998 6666666554322         11110 01                       1122355555554433   


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV  470 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  470 (537)
                              ....+.+.+.     ....+.++|++.+++.+  ++.|++||+.+++.+..+. +...+.+++|+|||++|+
T Consensus       232 --------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~  295 (337)
T d1pbyb_         232 --------AMREVRIMDV-----FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVW  295 (337)
T ss_dssp             --------EEEEEEECSS-----CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEE
T ss_pred             --------EEEEecCCCc-----ceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEE
Confidence                    2233333322     56678889999988776  4789999999999998887 567789999999999999


Q ss_pred             EEeCCCcEEEEECCCCeeEEEecCCcc
Q psy10942        471 STGADGLLKLWSIKTSTCVSTFDKHAL  497 (537)
Q Consensus       471 s~~~dg~v~vwd~~~~~~~~~~~~~~~  497 (537)
                      +++.|+.|++||.++++.+..++.+..
T Consensus       296 v~~~~~~i~v~D~~t~~~v~~i~~~g~  322 (337)
T d1pbyb_         296 LGGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             EESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             EEeCCCcEEEEECCCCcEEEEEECCCC
Confidence            999999999999999999998875433

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=6.1e-23  Score=190.35  Aligned_cols=308  Identities=10%  Similarity=-0.000  Sum_probs=207.6

Q ss_pred             eeeeccCCcceEEEecCcceEEEEEcCccceeeeecc--ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc
Q psy10942          8 FDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA--YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS   85 (537)
Q Consensus         8 ~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~   85 (537)
                      ++|+  +++++|+++++++.|.+||+++++.+++++.  ......+  .++|+       +..+++++..++.|++||+.
T Consensus         2 ~a~~--~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l--~~spD-------G~~l~v~~~~~~~v~~~d~~   70 (346)
T d1jmxb_           2 PALK--AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTA--MMAPD-------NRTAYVLNNHYGDIYGIDLD   70 (346)
T ss_dssp             CCCC--TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEE--EECTT-------SSEEEEEETTTTEEEEEETT
T ss_pred             ccCC--CCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceE--EECCC-------CCEEEEEECCCCcEEEEeCc
Confidence            5788  8999999999999999999999999997763  3344556  66883       33445666788999999999


Q ss_pred             ceehhhhcCCC-------cceEEEEEeccccEEEEEeC------------CceEEEEecccccCcccccccccceeEEee
Q psy10942         86 AVKELYQHGLS-------SPLVRIVRSSVKRMYAVVTA------------DHNISLYRLNSETGLEERPNKILKFRKQFV  146 (537)
Q Consensus        86 ~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  146 (537)
                      +++.+..+...       ..+..++|+|||+++++++.            +..+.+|+..+           .+....+.
T Consensus        71 t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~  139 (346)
T d1jmxb_          71 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-----------GLEAKPVR  139 (346)
T ss_dssp             TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-----------GGGBCCSE
T ss_pred             cCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccc-----------ceeeeEEE
Confidence            99887666543       24678999999999887753            56688888887           33333333


Q ss_pred             cc--hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942        147 GF--SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR  222 (537)
Q Consensus       147 ~~--~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h  222 (537)
                      .+  ...+..+.++ +++ .+++..  ..    +                 .+|+.       .+++..  +.     .+
T Consensus       140 ~~~~~~~~~~~~~~-~~~-~~~~~~--~~----~-----------------~~~~~-------~~~~~~~~~~-----~~  182 (346)
T d1jmxb_         140 TFPMPRQVYLMRAA-DDG-SLYVAG--PD----I-----------------YKMDV-------KTGKYTVALP-----LR  182 (346)
T ss_dssp             EEECCSSCCCEEEC-TTS-CEEEES--SS----E-----------------EEECT-------TTCCEEEEEC-----ST
T ss_pred             eeeccCceEEEEec-CCC-EEEEeC--Cc----c-----------------eEEEc-------cCCCEEEEEe-----cC
Confidence            22  2234445554 444 343332  22    5                 56776       555544  33     22


Q ss_pred             CCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942        223 DELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS  301 (537)
Q Consensus       223 ~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~  301 (537)
                         .....+   .++|++..++... .++.+.  ++.......                  .....+.++..+..+.+|+
T Consensus       183 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~  236 (346)
T d1jmxb_         183 ---NWNRKG---YSAPDVLYFWPHQSPRHEFS--MLYTIARFK------------------DDKQDPATADLLYGYLSVD  236 (346)
T ss_dssp             ---TCCCTT---BCCCBCCCCCCCCCTTCEEE--EEEEEEEC-------------------------CCCEEEEEEEEEE
T ss_pred             ---CCccce---EEeccccEEEEEecCCCceE--eeeeeeeec------------------cCceeEeeccCCceEEEEE
Confidence               344556   7888887765443 344444  443322100                  0002334455567899999


Q ss_pred             CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                      ..++....    .....|...+..+.+++++.+++.... +.+.+||+. ..+.+..+... .                 
T Consensus       237 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~-~~~~~~~~~~~-~-----------------  292 (346)
T d1jmxb_         237 LKTGKTHT----QEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLK-QRKLIKAANLD-H-----------------  292 (346)
T ss_dssp             TTTCCEEE----EEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETT-TTEEEEEEECS-S-----------------
T ss_pred             CCCCceEE----EEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECC-CCcEEEEEcCC-C-----------------
Confidence            98887543    234567778889999998887776654 568888877 44444433311 1                 


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS  456 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  456 (537)
                                                      .+.+++|+|||++|++++.|+.|++||..+++.+.+++.+.+.
T Consensus       293 --------------------------------~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~  335 (346)
T d1jmxb_         293 --------------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD  335 (346)
T ss_dssp             --------------------------------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred             --------------------------------CEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCC
Confidence                                            6778999999999999999999999999999999998855443

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=5.7e-23  Score=189.83  Aligned_cols=294  Identities=10%  Similarity=0.004  Sum_probs=199.8

Q ss_pred             ceEEEecCcceEEEEEcCccceeeeeccccc---cceeeeEeecCccccccCCcEEE-EEeCccceEEeeeccceehhhh
Q psy10942         17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYES---LETCAVFHLSDETESKSGGKTFV-LAGGEKSLLHYYETSAVKELYQ   92 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~wd~~~~~~~~~   92 (537)
                      ++++++++|+.|.+||+++++.++.++..+.   ...+  .+.|        +++++ ++++.++.|.+||+.+++.+..
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i--~~sp--------Dg~~l~v~~~~~~~v~v~D~~t~~~~~~   71 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVP--MVAP--------GGRIAYATVNKSESLVKIDLVTGETLGR   71 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCE--EECT--------TSSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEE--EECC--------CCCEEEEEECCCCeEEEEECCCCcEEEE
Confidence            6899999999999999999999998874332   3444  6688        55555 5677899999999999999887


Q ss_pred             cCCCc------ceEEEEEeccccEEEEEeC------------CceEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         93 HGLSS------PLVRIVRSSVKRMYAVVTA------------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        93 ~~~~~------~v~~~~~s~~~~~la~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      +..+.      .+..++|+||+++++++..            +..+.+||..+           .+....+..+ ..+..
T Consensus        72 ~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----------~~~~~~~~~~-~~~~~  139 (337)
T d1pbyb_          72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----------LSRRKAFEAP-RQITM  139 (337)
T ss_dssp             EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----------TEEEEEEECC-SSCCC
T ss_pred             EecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccC-----------CeEEEecccc-CCceE
Confidence            76552      4568999999999988764            45678888888           6667777654 45889


Q ss_pred             hhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEe
Q psy10942        155 IALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLE  232 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~  232 (537)
                      ++|+ ++++++++++.+      +                 .+||.       .+.+..  +.     .+   ...... 
T Consensus       140 ~~~s-~dg~~l~~~~~~------~-----------------~~~d~-------~~~~~~~~~~-----~~---~~~~~~-  179 (337)
T d1pbyb_         140 LAWA-RDGSKLYGLGRD------L-----------------HVMDP-------EAGTLVEDKP-----IQ---SWEAET-  179 (337)
T ss_dssp             EEEC-TTSSCEEEESSS------E-----------------EEEET-------TTTEEEEEEC-----ST---TTTTTT-
T ss_pred             EEEc-CCCCEEEEEcCC------c-----------------ceeee-------ecCcEEEEee-----cC---Cccccc-
Confidence            9999 788888776533      4                 55676       554443  22     11   111222 


Q ss_pred             ccCcccCCCeeeeccCC-CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeee
Q psy10942        233 RGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNV  311 (537)
Q Consensus       233 ~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~  311 (537)
                        .++|++..+...... +...  .+........                    .....+..++.+.+|+..++....  
T Consensus       180 --~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--  233 (337)
T d1pbyb_         180 --YAQPDVLAVWNQHESSGVMA--TPFYTARKDI--------------------DPADPTAYRTGLLTMDLETGEMAM--  233 (337)
T ss_dssp             --BCCCBCCCCCCCCTTTTEEE--EEEEEEBTTS--------------------CTTSGGGEEEEEEEEETTTCCEEE--
T ss_pred             --eecCCcceeeccccccceee--eeeeeeeecc--------------------ceeeecccCccEEEEEcCCCcEEE--
Confidence              455665544332222 2222  2111110000                    001112234578899988876432  


Q ss_pred             ecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942        312 LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF  391 (537)
Q Consensus       312 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  391 (537)
                        .....+...+..+.++|++.+++.+  ++.+++||+. ..+.+..+.. ..                           
T Consensus       234 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~-~~~~~~~~~~-~~---------------------------  280 (337)
T d1pbyb_         234 --REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE-KNASIKRVPL-PH---------------------------  280 (337)
T ss_dssp             --EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT-TTEEEEEEEC-SS---------------------------
T ss_pred             --EEecCCCcceEEEEecccceEEEEc--cccEEEEECC-CCcEEEEEcC-CC---------------------------
Confidence              2334566778888999999888765  4778888887 5554444321 11                           


Q ss_pred             ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC
Q psy10942        392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  453 (537)
                                            .+.+++|+|||++|++++.++.|++||..+++.+.+++..
T Consensus       281 ----------------------~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         281 ----------------------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             ----------------------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             ----------------------CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence                                  6778999999999999999999999999999999888743

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.90  E-value=6.5e-22  Score=179.54  Aligned_cols=272  Identities=12%  Similarity=0.045  Sum_probs=190.8

Q ss_pred             EEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcc
Q psy10942         19 SVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSP   98 (537)
Q Consensus        19 l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~   98 (537)
                      .++.+.+++|.+||+++++.+++++.......+  .++|+       +..++++++.++.|++||+.+++.+..+..+..
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~v--a~spd-------G~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~   75 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGA--VISPD-------GTKVYVANAHSNDVSIIDTATNNVIATVPAGSS   75 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECSSSEEEE--EECTT-------SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEECCCCceEE--EEeCC-------CCEEEEEECCCCEEEEEECCCCceeeeeecccc
Confidence            346678999999999999999999877666666  66883       334446777889999999999999999888888


Q ss_pred             eEEEEEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee-ccccCC
Q psy10942         99 LVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGG  176 (537)
Q Consensus        99 v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~  176 (537)
                      +..++|++++++++++ ..++.+.+|+..+           .+....+..+. ...+++|+ +++..++++.. +..   
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~-~dg~~~~~~~~~~~~---  139 (301)
T d1l0qa2          76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTS-----------NTVAGTVKTGK-SPLGLALS-PDGKKLYVTNNGDKT---  139 (301)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTT-----------TEEEEEEECSS-SEEEEEEC-TTSSEEEEEETTTTE---
T ss_pred             ccccccccccccccccccccceeeeccccc-----------ceeeeeccccc-cceEEEee-cCCCeeeeeeccccc---
Confidence            9999999999876554 4677899999998           66677776554 46788899 66666654433 333   


Q ss_pred             cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC-ccee
Q psy10942        177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP-STLE  254 (537)
Q Consensus       177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~-~i~~  254 (537)
                       +                 .+|+.       .+.... ..     .+  ...+..+   .++|+++.++++..+. .+. 
T Consensus       140 -~-----------------~~~~~-------~~~~~~~~~-----~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~-  183 (301)
T d1l0qa2         140 -V-----------------SVINT-------VTKAVINTV-----SV--GRSPKGI---AVTPDGTKVYVANFDSMSIS-  183 (301)
T ss_dssp             -E-----------------EEEET-------TTTEEEEEE-----EC--CSSEEEE---EECTTSSEEEEEETTTTEEE-
T ss_pred             -e-----------------eeeec-------cccceeeec-----cc--CCCceEE---Eeeccccceeeecccccccc-
Confidence             6                 66777       555555 22     33  4557788   8899888777665543 333 


Q ss_pred             ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942        255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL  334 (537)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  334 (537)
                       +|....                                           .....     . ......+..++++++++.
T Consensus       184 -~~~~~~-------------------------------------------~~~~~-----~-~~~~~~~~~~~~~~~g~~  213 (301)
T d1l0qa2         184 -VIDTVT-------------------------------------------NSVID-----T-VKVEAAPSGIAVNPEGTK  213 (301)
T ss_dssp             -EEETTT-------------------------------------------TEEEE-----E-EECSSEEEEEEECTTSSE
T ss_pred             -cccccc-------------------------------------------eeeee-----c-ccccCCcceeeccccccc
Confidence             333322                                           22110     0 112234577899999998


Q ss_pred             EEEEeCC---CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942        335 LASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII  411 (537)
Q Consensus       335 l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (537)
                      ++++..+   +.|++||+. ..+.+..+.                                .+.                
T Consensus       214 ~~v~~~~~~~~~v~v~D~~-t~~~~~~~~--------------------------------~~~----------------  244 (301)
T d1l0qa2         214 AYVTNVDKYFNTVSMIDTG-TNKITARIP--------------------------------VGP----------------  244 (301)
T ss_dssp             EEEEEECSSCCEEEEEETT-TTEEEEEEE--------------------------------CCS----------------
T ss_pred             cccccccceeeeeeeeecC-CCeEEEEEc--------------------------------CCC----------------
Confidence            8776533   456777766 334333332                                211                


Q ss_pred             EeeeeEEEEcCCCCEE-EEEeCCCcEEEEECCCceeeeEeec
Q psy10942        412 TGGVWFVNFSPLDRIL-ISSSGDATIKLWCLTDYVCLKSLEG  452 (537)
Q Consensus       412 ~~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~  452 (537)
                        .+..++|+|||++| ++++.++.|++||+++++.+.++..
T Consensus       245 --~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         245 --DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             --SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             --CEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence              56789999999977 5667789999999999999888864

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=1.4e-22  Score=187.90  Aligned_cols=295  Identities=11%  Similarity=-0.016  Sum_probs=193.8

Q ss_pred             EEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-chhhhhhhhcccCCCccEEEee-eccccCCccc
Q psy10942        102 IVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-FSDEILDIALLGEEDSHIVVAS-NEYLNGGDLS  179 (537)
Q Consensus       102 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~  179 (537)
                      ++|++++++|++++.+++|.+||+.+           .+++++++. |...+.+++|+ ||+++++++. .++.    | 
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t-----------~~~~~t~~~~~~~~p~~l~~s-pDG~~l~v~~~~~~~----v-   64 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVAS-----------DTVYKSCVMPDKFGPGTAMMA-PDNRTAYVLNNHYGD----I-   64 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTT-----------TEEEEEEECSSCCSSCEEEEC-TTSSEEEEEETTTTE----E-
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCC-----------CCEEEEEEcCCCCCcceEEEC-CCCCEEEEEECCCCc----E-
Confidence            47899999999999999999999999           788888874 45568899999 7777775543 3344    8 


Q ss_pred             ceeecccCCCcchhhHHHHHHHHHhhhccccccc--cc-ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecc
Q psy10942        180 GLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KH-NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEEL  256 (537)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~-~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~i  256 (537)
                                      .+||+       .+++..  +. ......+  ...+..+   +|+|||++++++..+....  .
T Consensus        65 ----------------~~~d~-------~t~~~~~~~~~~~~~~~~--~~~~~~v---~~s~DG~~l~v~~~~~~~~--~  114 (346)
T d1jmxb_          65 ----------------YGIDL-------DTCKNTFHANLSSVPGEV--GRSMYSF---AISPDGKEVYATVNPTQRL--N  114 (346)
T ss_dssp             ----------------EEEET-------TTTEEEEEEESCCSTTEE--EECSSCE---EECTTSSEEEEEEEEEEEC--S
T ss_pred             ----------------EEEeC-------ccCeeeeeeccccccccc--CCceEEE---EEecCCCEEEEEecCCcce--e
Confidence                            89999       766554  21 0001112  2345677   8999999998876654443  3


Q ss_pred             ccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE
Q psy10942        257 EKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA  336 (537)
Q Consensus       257 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  336 (537)
                      |...                               ..++.+.+|+..+++.....   ........+..+.++++++.++
T Consensus       115 ~~~~-------------------------------~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  160 (346)
T d1jmxb_         115 DHYV-------------------------------VKPPRLEVFSTADGLEAKPV---RTFPMPRQVYLMRAADDGSLYV  160 (346)
T ss_dssp             SCEE-------------------------------ECCCEEEEEEGGGGGGBCCS---EEEECCSSCCCEEECTTSCEEE
T ss_pred             eeec-------------------------------cCcceEEEEecccceeeeEE---EeeeccCceEEEEecCCCEEEE
Confidence            3221                               23456777777665432111   0111123345556666665554


Q ss_pred             EEeCCCcEEEEEccCCceeeEEEEecCC---------CC--------------------------EEEEEcCCCcEEEEE
Q psy10942        337 SGSLDKTVKVWSTTGGLKLLNVLRGHKK---------GT--------------------------QIVSTGADGLLKLWS  381 (537)
Q Consensus       337 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~---------~~--------------------------~l~~~~~d~~i~i~d  381 (537)
                      .   ++.+.+|++. ..+.+..+..+..         +.                          .+.++..+..+.+||
T Consensus       161 ~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
T d1jmxb_         161 A---GPDIYKMDVK-TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD  236 (346)
T ss_dssp             E---SSSEEEECTT-TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred             e---CCcceEEEcc-CCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEE
Confidence            3   2457777776 4555555543321         11                          112222334455555


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEE
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH  461 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  461 (537)
                      ..++......           ..+...     .+..+.+++++.+++.... +.|.+||..+++.+..+. +...+.+++
T Consensus       237 ~~~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~~~~va  298 (346)
T d1jmxb_         237 LKTGKTHTQE-----------FADLTE-----LYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHTYYCVA  298 (346)
T ss_dssp             TTTCCEEEEE-----------EEECSS-----CEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSCCCEEE
T ss_pred             CCCCceEEEE-----------eecccc-----eeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc-CCCCEEEEE
Confidence            5555433222           111111     5667788888887777654 579999999999988887 456799999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        462 FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       462 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      |+|||++|++++.|+.|++||.++++.+..++.+.+.+
T Consensus       299 ~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~~  336 (346)
T d1jmxb_         299 FDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM  336 (346)
T ss_dssp             ECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSCC
T ss_pred             EcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCCc
Confidence            99999999999999999999999999999998766554

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.85  E-value=3.8e-19  Score=166.42  Aligned_cols=313  Identities=6%  Similarity=-0.145  Sum_probs=208.5

Q ss_pred             CcEEEEEe-----CccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC----------CceEEEEecccccC
Q psy10942         66 GKTFVLAG-----GEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA----------DHNISLYRLNSETG  130 (537)
Q Consensus        66 ~~~~~~~~-----~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~  130 (537)
                      +++.+++.     +..+.|.+||..+++.+.++..+. ...++|||||++|++++.          ++.|.+||..+   
T Consensus        31 dg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~-~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t---  106 (373)
T d2madh_          31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF-LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT---  106 (373)
T ss_pred             CCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCC-CccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCC---
Confidence            44555443     234579999999999998877543 347999999999998753          57899999999   


Q ss_pred             cccccccccceeEEeecchhhh-------hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942        131 LEERPNKILKFRKQFVGFSDEI-------LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE  203 (537)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~  203 (537)
                              ++.+..+..+....       ..+.|+ ++++.+++...+..  ..+                 .+|+.   
T Consensus       107 --------~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~~~v~~~~~~--~~~-----------------~~~~~---  155 (373)
T d2madh_         107 --------FLPIADIELPDAPRFDVGPYSWMNANT-PNNADLLFFQFAAG--PAV-----------------GLVVQ---  155 (373)
T ss_pred             --------CcEEEEEecCCcceeEeccCCCcEEEE-eCCCcEEEEEEcCC--Cce-----------------EEeec---
Confidence                    67676666554432       446677 66666666554443  335                 66776   


Q ss_pred             hhhcccccccccccccccCCCcCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccc--cccceeee-
Q psy10942        204 AKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAF-  279 (537)
Q Consensus       204 ~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~-  279 (537)
                          ...+..       .+  .....++   .++|+++.+ ++.+.|+.+.  +|+.............  ........ 
T Consensus       156 ----~~~~~~-------~~--~~~~~~~---~~s~~g~~~~v~~~~dg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (373)
T d2madh_         156 ----GGSSDD-------QL--LSSPTCY---HIHPGAPSTFYLLCAQGGLA--KTDHAGGAAGAGLVGAMLTAAQNLLTQ  217 (373)
T ss_pred             ----cCCeEE-------EE--eccceeE---EEecCCCcEEEEEcCCCeEE--EEEcCCceeeEEEeeeccccCccceee
Confidence                443332       33  4456677   889998755 6788999999  9998874322111000  00000000 


Q ss_pred             -eeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE
Q psy10942        280 -YTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV  358 (537)
Q Consensus       280 -~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  358 (537)
                       .....-..++..+.++.+.+|+..+.....   ......+........+.|.+...+..+.|+....+-          
T Consensus       218 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------  284 (373)
T d2madh_         218 PAQANKSGRIVWPVYSGKILQADISAAGATN---KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL----------  284 (373)
T ss_pred             eEEECCCceEEEecCCceEEEEEcCCCeEEE---EEeeccccCcEEeeeeccCcceeeEEecCCCeEEEe----------
Confidence             000001355666788999999988775432   122334445566666777666666666666443322          


Q ss_pred             EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCE--EEEEeCCCcE
Q psy10942        359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRI--LISSSGDATI  436 (537)
Q Consensus       359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~--l~~~~~dg~i  436 (537)
                         ...+..++....++.+.+||..+++.+..+....                  .+..++|+|||+.  +++++.|+.|
T Consensus       285 ---~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~------------------~~~~~a~spDG~~~l~vt~~~d~~v  343 (373)
T d2madh_         285 ---TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH------------------DVDAISVAQDGGPDLYALSAGTEVL  343 (373)
T ss_pred             ---cCCCceEEeecCCCeEEEEECCCCcEEEEecCCC------------------CeeEEEECCCCCEEEEEEeCCCCeE
Confidence               2245566777788899999999999888775443                  6778999999984  4678899999


Q ss_pred             EEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942        437 KLWCLTDYVCLKSLEGHDASVLRCHFINK  465 (537)
Q Consensus       437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~  465 (537)
                      ++||+.+++.+.++..+....+.+++.++
T Consensus       344 ~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         344 HIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             EEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            99999999999999988777788877654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.84  E-value=2.3e-18  Score=161.05  Aligned_cols=310  Identities=9%  Similarity=-0.083  Sum_probs=196.2

Q ss_pred             CCcceEEEEEeccccEEEEEe-----CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942         95 LSSPLVRIVRSSVKRMYAVVT-----ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS  169 (537)
Q Consensus        95 ~~~~v~~~~~s~~~~~la~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  169 (537)
                      ..+++..++++|||+.+++..     ..+.|.+||..+           ++.+.++..+..  ..++|+ ||+++++++.
T Consensus        19 ~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~t-----------g~~~~~~~~~~~--~~~a~S-pDG~~l~va~   84 (373)
T d2madh_          19 ADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGS-----------GSILGHVNGGFL--PNPVAA-HSGSEFALAS   84 (373)
T ss_pred             CCCCccccccCCCCCEEEEEcccccCCCceEEEEECCC-----------CCEEEEEeCCCC--ccEEEc-CCCCEEEEEe
Confidence            346789999999999987753     345699999988           688888876654  378999 7889988876


Q ss_pred             eccc------cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCC
Q psy10942        170 NEYL------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEED  241 (537)
Q Consensus       170 ~~~~------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~  241 (537)
                      ....      ..+.|                 .+||.       .+++..  +.     .+  ......+   ...|.+ 
T Consensus        85 ~~~~~~~~~~~~~~v-----------------~v~D~-------~t~~~~~~~~-----~~--~~~~~~~---~~~~~~-  129 (373)
T d2madh_          85 TSFSRIAKGKRTDYV-----------------EVFDP-------VTFLPIADIE-----LP--DAPRFDV---GPYSWM-  129 (373)
T ss_pred             ecCCcccccccceEE-----------------EEEEC-------CCCcEEEEEe-----cC--CcceeEe---ccCCCc-
Confidence            5432      11336                 88888       776665  33     33  3333333   222221 


Q ss_pred             eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942        242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK  321 (537)
Q Consensus       242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~  321 (537)
                       ++.....+.+.  +|..                                ..++.+.+|+....+..         .+..
T Consensus       130 -~~~s~dg~~~~--v~~~--------------------------------~~~~~~~~~~~~~~~~~---------~~~~  165 (373)
T d2madh_         130 -NANTPNNADLL--FFQF--------------------------------AAGPAVGLVVQGGSSDD---------QLLS  165 (373)
T ss_pred             -EEEEeCCCcEE--EEEE--------------------------------cCCCceEEeeccCCeEE---------EEec
Confidence             11111112222  2222                                22345677777665432         2233


Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEEEec---------------CCCCEEEEEcCCCcEEEEECCCC
Q psy10942        322 DINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVLRGH---------------KKGTQIVSTGADGLLKLWSIKTS  385 (537)
Q Consensus       322 ~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------~~~~~l~~~~~d~~i~i~d~~~~  385 (537)
                      ...++.++|+++.+ ++.+.|+.+.+|+.. ..........+               ..+..++..+.++.+.+|+....
T Consensus       166 ~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  244 (373)
T d2madh_         166 SPTCYHIHPGAPSTFYLLCAQGGLAKTDHA-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA  244 (373)
T ss_pred             cceeEEEecCCCcEEEEEcCCCeEEEEEcC-CceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCC
Confidence            45688899998755 577889999999987 44433332211               12345666778899999998887


Q ss_pred             eeee--eeccCCcceEEEEEecCCCceEEe---eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEE
Q psy10942        386 TCVS--TFDKHALKIWTLAITKDENQIITG---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRC  460 (537)
Q Consensus       386 ~~~~--~~~~~~~~i~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~  460 (537)
                      ....  ....+........+.|........   .-....+.+++..++....++.+.+||..+++.+..+. +...+..+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~  323 (373)
T d2madh_         245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAI  323 (373)
T ss_pred             eEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEE
Confidence            5432  223333333333333332111000   00112233344455666777899999999999988876 56778999


Q ss_pred             EEecCCCE--EEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        461 HFINKGTQ--IVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       461 ~~s~~~~~--l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                      +|+|||+.  +++++.|+.|++||+.+++.++.+..+....
T Consensus       324 a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P  364 (373)
T d2madh_         324 SVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGP  364 (373)
T ss_pred             EECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCC
Confidence            99999984  4678899999999999999999998776655

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=1e-19  Score=169.17  Aligned_cols=299  Identities=9%  Similarity=-0.068  Sum_probs=181.7

Q ss_pred             CcEEEEEe-----CccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccC
Q psy10942         66 GKTFVLAG-----GEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETG  130 (537)
Q Consensus        66 ~~~~~~~~-----~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~  130 (537)
                      +++.+++.     .....|.+||..+++.+.++... ....++|||||++|++++          .|+.|++||..+   
T Consensus        12 dg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g-~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t---   87 (355)
T d2bbkh_          12 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---   87 (355)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---
T ss_pred             CCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECC-CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCC---
Confidence            44445443     34567999999999998877643 344799999999988754          478899999999   


Q ss_pred             cccccccccceeEEeecchh-------hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942        131 LEERPNKILKFRKQFVGFSD-------EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE  203 (537)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~  203 (537)
                              .+....+..+..       ....++|+ +++++++++.....  ..+                 .+|+.   
T Consensus        88 --------~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~~~v~~~~~~--~~~-----------------~~~~~---  136 (355)
T d2bbkh_          88 --------LLPTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPA--PAV-----------------GVVDL---  136 (355)
T ss_dssp             --------CCEEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSS--CEE-----------------EEEET---
T ss_pred             --------CCEEEEEecCCcceeecCCCCceEEEe-cCCCeeEEecCCCC--cee-----------------eeeec---
Confidence                    566666654332       34667898 77777777654443  335                 66666   


Q ss_pred             hhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942        204 AKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT  281 (537)
Q Consensus       204 ~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~  281 (537)
                          .+++..  +.     .+  .. ...     +.......+..+.|+...  .+....                    
T Consensus       137 ----~~~~~~~~~~-----~~--~~-~~~-----~~~~~~~~~~~~~dg~~~--~v~~~~--------------------  177 (355)
T d2bbkh_         137 ----EGKAFKRMLD-----VP--DC-YHI-----FPTAPDTFFMHCRDGSLA--KVAFGT--------------------  177 (355)
T ss_dssp             ----TTTEEEEEEE-----CC--SE-EEE-----EEEETTEEEEEETTSCEE--EEECCS--------------------
T ss_pred             ----CCCcEeeEEe-----cC--Cc-ceE-----eecCCcceEEEcCCCCEE--EEEecC--------------------
Confidence                544443  22     11  11 111     111112222333333333  222222                    


Q ss_pred             CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe
Q psy10942        282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG  361 (537)
Q Consensus       282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  361 (537)
                                  ++.+.+++.....          ..+...+....+.+++..++.++.++.+++|++... ..      
T Consensus       178 ------------~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~------  228 (355)
T d2bbkh_         178 ------------EGTPEITHTEVFH----------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG-DA------  228 (355)
T ss_dssp             ------------SSCCEEEECCCCS----------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS-SC------
T ss_pred             ------------CCeEEEEeccccc----------ceecceeeeccccCCCCeEEEecCCCeEEEEecCCC-cE------
Confidence                        2233344433322          122333445667788888888899999999998732 11      


Q ss_pred             cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--------
Q psy10942        362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--------  433 (537)
Q Consensus       362 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------  433 (537)
                                      .+++..+.        +........+.|.       ....+++++++..++....+        
T Consensus       229 ----------------~~~~~~~~--------~~~~~~~~~~~p~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~  277 (355)
T d2bbkh_         229 ----------------KFLPAVEA--------LTEAERADGWRPG-------GWQQVAYHRALDRIYLLVDQRDEWRHKT  277 (355)
T ss_dssp             ----------------EECCCEES--------SCHHHHHTTEEEC-------SSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred             ----------------EEEeccCC--------cccceEeeeeecc-------ceEEEEEeCCCCeEEEEeccCCceeecC
Confidence                            11111111        0000111112222       23446778888877765543        


Q ss_pred             --CcEEEEECCCceeeeEeecCCcceEEEEEecCCC--EEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942        434 --ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT--QIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  499 (537)
Q Consensus       434 --g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i  499 (537)
                        ..|.+||..+++.+..+.. ...+.+++|+|||+  ++++++.|+.|++||+++++.++++.++....
T Consensus       278 ~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p  346 (355)
T d2bbkh_         278 ASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP  346 (355)
T ss_dssp             CEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred             CCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCc
Confidence              3699999999999888874 45689999999997  45667789999999999999999997654433

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.79  E-value=2.1e-18  Score=160.15  Aligned_cols=311  Identities=8%  Similarity=-0.066  Sum_probs=179.5

Q ss_pred             cCCcceEEEe-----cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEe----------Cccc
Q psy10942         13 QITSEFSVHC-----GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAG----------GEKS   77 (537)
Q Consensus        13 ~~~~~~l~s~-----~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~   77 (537)
                      +||++.++..     ..++.|.+||..+++.+.+++..... .+  .++|        ++++++++          ..++
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~-~~--a~Sp--------Dg~~l~v~~~~~~~~~~g~~d~   78 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NP--VVAD--------DGSFIAHASTVFSRIARGERTD   78 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-EE--EECT--------TSSCEEEEEEEEEETTEEEEEE
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC-ce--EEcC--------CCCEEEEEeCCCccccccCCCC
Confidence            3899988765     34567999999999999988744332 45  6688        55666654          3478


Q ss_pred             eEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEe--CCceEEEEecccccCcccccccccceeEEeec
Q psy10942         78 LLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVT--ADHNISLYRLNSETGLEERPNKILKFRKQFVG  147 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  147 (537)
                      .|++||+.+++.+..+..+        .....++|+|++++++++.  .+..+.+|+..+           .+....+..
T Consensus        79 ~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~  147 (355)
T d2bbkh_          79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-----------KAFKRMLDV  147 (355)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-----------TEEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCC-----------CcEeeEEec
Confidence            8999999999887665432        2345689999999988775  456789999988           566655554


Q ss_pred             chh-------hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccc
Q psy10942        148 FSD-------EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERL  220 (537)
Q Consensus       148 ~~~-------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~  220 (537)
                      +..       ....+.++ +++..+++......   .+                 .+++.       ...   ..     
T Consensus       148 ~~~~~~~~~~~~~~~~~~-~dg~~~~v~~~~~~---~~-----------------~~~~~-------~~~---~~-----  191 (355)
T d2bbkh_         148 PDCYHIFPTAPDTFFMHC-RDGSLAKVAFGTEG---TP-----------------EITHT-------EVF---HP-----  191 (355)
T ss_dssp             CSEEEEEEEETTEEEEEE-TTSCEEEEECCSSS---CC-----------------EEEEC-------CCC---SC-----
T ss_pred             CCcceEeecCCcceEEEc-CCCCEEEEEecCCC---eE-----------------EEEec-------ccc---cc-----
Confidence            322       12234444 34444433222111   11                 11111       000   01     


Q ss_pred             cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      .+  ...+...   .+.+++..++.++.++.+.  +|+...+.                                 +.++
T Consensus       192 ~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~--v~~~~~~~---------------------------------~~~~  231 (355)
T d2bbkh_         192 ED--EFLINHP---AYSQKAGRLVWPTYTGKIH--QIDLSSGD---------------------------------AKFL  231 (355)
T ss_dssp             TT--SCBCSCC---EEETTTTEEEEEBTTSEEE--EEECTTSS---------------------------------CEEC
T ss_pred             ee--cceeeec---cccCCCCeEEEecCCCeEE--EEecCCCc---------------------------------EEEE
Confidence            22  2333344   5556666666666667776  66665521                                 1111


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                      +..+.....   .............++++|++..++....++...                       +.......|.+|
T Consensus       232 ~~~~~~~~~---~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~-----------------------~~~~~~~~v~v~  285 (355)
T d2bbkh_         232 PAVEALTEA---ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW-----------------------RHKTASRFVVVL  285 (355)
T ss_dssp             CCEESSCHH---HHHTTEEECSSSCEEEETTTTEEEEEEEECCTT-----------------------CTTSCEEEEEEE
T ss_pred             eccCCcccc---eEeeeeeccceEEEEEeCCCCeEEEEeccCCce-----------------------eecCCCCeEEEE
Confidence            111110000   000000111223456677766665543322100                       001112356777


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC--EEEEEeCCCcEEEEECCCceeeeEeecCCcceE
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR--ILISSSGDATIKLWCLTDYVCLKSLEGHDASVL  458 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~  458 (537)
                      |..+++.+..+....                  .+.+++|+|||+  +++++..|+.|++||+.+++.+.++.++.....
T Consensus       286 d~~t~~~~~~~~~~~------------------~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~  347 (355)
T d2bbkh_         286 DAKTGERLAKFEMGH------------------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQ  347 (355)
T ss_dssp             ETTTCCEEEEEEEEE------------------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCC
T ss_pred             eCCCCcEEEEecCCC------------------CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCcc
Confidence            777777666554322                  677899999997  456677799999999999999999987755555


Q ss_pred             EEEEecC
Q psy10942        459 RCHFINK  465 (537)
Q Consensus       459 ~~~~s~~  465 (537)
                      .+.+.++
T Consensus       348 ~i~~~d~  354 (355)
T d2bbkh_         348 VITTADM  354 (355)
T ss_dssp             EEECCCC
T ss_pred             EEEeCCC
Confidence            5555443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=3.4e-17  Score=150.24  Aligned_cols=296  Identities=11%  Similarity=0.123  Sum_probs=176.9

Q ss_pred             EEEEEeCccceEEeeeccce---ehhhhcCCCcceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeE
Q psy10942         68 TFVLAGGEKSLLHYYETSAV---KELYQHGLSSPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRK  143 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~  143 (537)
                      ..+++++.++.|++|++.+.   +.+..+...+.+..++|||||++|++++ .|+.|++|++......       .+...
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~-------~~~~~   77 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-------LTFAA   77 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-------EEEEE
T ss_pred             EEEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCc-------EEEee
Confidence            45567778999999998754   3455566778999999999999986655 4899999999873110       11111


Q ss_pred             EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCC
Q psy10942        144 QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRD  223 (537)
Q Consensus       144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~  223 (537)
                       ...+...+..++|+ +++++|+++..+.   +.+                 .+|+.       ........ .....+ 
T Consensus        78 -~~~~~~~p~~l~~s-pDg~~l~v~~~~~---~~v-----------------~~~~~-------~~~~~~~~-~~~~~~-  126 (333)
T d1ri6a_          78 -ESALPGSLTHISTD-HQGQFVFVGSYNA---GNV-----------------SVTRL-------EDGLPVGV-VDVVEG-  126 (333)
T ss_dssp             -EEECSSCCSEEEEC-TTSSEEEEEETTT---TEE-----------------EEEEE-------ETTEEEEE-EEEECC-
T ss_pred             -ecccCCCceEEEEc-CCCCEEeecccCC---Cce-----------------eeecc-------ccccceec-ccccCC-
Confidence             12233446789999 7888887765432   225                 55554       32222100 011145 


Q ss_pred             CcCeEEEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942        224 ELKTVTLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST  302 (537)
Q Consensus       224 ~~~~v~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~  302 (537)
                       ...+.++   .++|++++++.++.+ ..+.  +|+........                               .... 
T Consensus       127 -~~~~~~v---~~s~d~~~~~~~~~~~~~i~--~~~~~~~~~~~-------------------------------~~~~-  168 (333)
T d1ri6a_         127 -LDGCHSA---NISPDNRTLWVPALKQDRIC--LFTVSDDGHLV-------------------------------AQDP-  168 (333)
T ss_dssp             -CTTBCCC---EECTTSSEEEEEEGGGTEEE--EEEECTTSCEE-------------------------------EEEE-
T ss_pred             -CccceEE---Eeeecceeeeccccccceee--EEEeccCCcce-------------------------------eeec-
Confidence             5667788   899999888766543 4455  66654421000                               0000 


Q ss_pred             CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942        303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS  381 (537)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d  381 (537)
                                .............++|++++..++... ..+...+++..............                 ..
T Consensus       169 ----------~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------------~~  221 (333)
T d1ri6a_         169 ----------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL-----------------DM  221 (333)
T ss_dssp             ----------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE-----------------EC
T ss_pred             ----------eeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeee-----------------ee
Confidence                      000112234467899999998877665 45567777765222211111100                 00


Q ss_pred             CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCceeeeEe---ecCCcce
Q psy10942        382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVCLKSL---EGHDASV  457 (537)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~---~~~~~~v  457 (537)
                      ....     . ...                 .....+++++++++++... .++.+.+|++.........   ..+...+
T Consensus       222 ~~~~-----~-~~~-----------------~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  278 (333)
T d1ri6a_         222 MPEN-----F-SDT-----------------RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQP  278 (333)
T ss_dssp             SCTT-----C-CSC-----------------CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSC
T ss_pred             eecC-----C-Ccc-----------------ccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCe
Confidence            0000     0 000                 0456678899998766554 5678999988764333332   2344567


Q ss_pred             EEEEEecCCCEEEEEeC-CCcEEEE--ECCCCeeE
Q psy10942        458 LRCHFINKGTQIVSTGA-DGLLKLW--SIKTSTCV  489 (537)
Q Consensus       458 ~~~~~s~~~~~l~s~~~-dg~v~vw--d~~~~~~~  489 (537)
                      ..++|+|||++|++++. ++.|++|  |.++|++.
T Consensus       279 ~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~  313 (333)
T d1ri6a_         279 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH  313 (333)
T ss_dssp             CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred             eEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEE
Confidence            88999999999887764 5889998  55677653

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.5e-15  Score=139.15  Aligned_cols=278  Identities=12%  Similarity=0.059  Sum_probs=169.0

Q ss_pred             ceEEEecCcceEEEEEcCcc---ceeeeeccccccceeeeEeecCccccccCCcEEE-EEeCccceEEeeeccceehh--
Q psy10942         17 EFSVHCGRDKVLFTWDLSSR---KQLRSYPAYESLETCAVFHLSDETESKSGGKTFV-LAGGEKSLLHYYETSAVKEL--   90 (537)
Q Consensus        17 ~~l~s~~~~g~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~wd~~~~~~~--   90 (537)
                      ..+++++++++|++|++++.   +.++.+++...+..+  .++|        ++++| +++..++.|++|++......  
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~l--a~sp--------DG~~L~v~~~~d~~i~~~~i~~~~~~~~   74 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPM--VVSP--------DKRYLYVGVRPEFRVLAYRIAPDDGALT   74 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCE--EECT--------TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEE--EEeC--------CCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence            45678889999999998764   334556677778888  6688        55666 45556899999998765432  


Q ss_pred             --hhcCCCcceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942         91 --YQHGLSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV  167 (537)
Q Consensus        91 --~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  167 (537)
                        ........+..++|+|||++|++++. ++.+.+|+.....         .........+...+.++.|+ ++++.++.
T Consensus        75 ~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~s-~d~~~~~~  144 (333)
T d1ri6a_          75 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL---------PVGVVDVVEGLDGCHSANIS-PDNRTLWV  144 (333)
T ss_dssp             EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE---------EEEEEEEECCCTTBCCCEEC-TTSSEEEE
T ss_pred             EeeecccCCCceEEEEcCCCCEEeecccCCCceeeecccccc---------ceecccccCCCccceEEEee-ecceeeec
Confidence              22333356788999999999998875 6789999887621         12223344566678899999 67777665


Q ss_pred             eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCeee
Q psy10942        168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFP  244 (537)
Q Consensus       168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~  244 (537)
                      +.....   .+                 .+|+.       ......   .........  ......+   +|++++.+++
T Consensus       145 ~~~~~~---~i-----------------~~~~~-------~~~~~~~~~~~~~~~~~~--g~~p~~i---~~~~~~~~~~  192 (333)
T d1ri6a_         145 PALKQD---RI-----------------CLFTV-------SDDGHLVAQDPAEVTTVE--GAGPRHM---VFHPNEQYAY  192 (333)
T ss_dssp             EEGGGT---EE-----------------EEEEE-------CTTSCEEEEEEEEEECST--TCCEEEE---EECTTSSEEE
T ss_pred             cccccc---ee-----------------eEEEe-------ccCCcceeeeceeeeeec--CCCccEE---EEeccceeEE
Confidence            554332   24                 44444       222111   000001123  4456778   8999998876


Q ss_pred             ecc-CCCcceeccccccCCCcccccccc----cc-cc----eeeeeeC-CcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942        245 RQS-MEPSTLEELEKRKTYHFPLFGIFV----PE-AE----HGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLLNVLR  313 (537)
Q Consensus       245 ~~~-~d~~i~~~iw~~~~~~~~~~~~~~----~~-~~----~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~  313 (537)
                      ... ..+...  +|+.............    +. ..    ....... ..-..++.+..++.+.+|++......... .
T Consensus       193 ~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  269 (333)
T d1ri6a_         193 CVNELNSSVD--VWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK-E  269 (333)
T ss_dssp             EEETTTTEEE--EEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE-E
T ss_pred             eeccccCceE--EEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEE-E
Confidence            543 445555  6665443211111000    00 00    0000000 01045666777889999998766543322 1


Q ss_pred             ccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcc
Q psy10942        314 GHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTT  350 (537)
Q Consensus       314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~  350 (537)
                       ....+...+.+++|+|||++|++++. ++.|.+|++.
T Consensus       270 -~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id  306 (333)
T d1ri6a_         270 -GFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV  306 (333)
T ss_dssp             -EEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred             -EEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEE
Confidence             11233456788999999999887764 5889999765

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.66  E-value=2.3e-14  Score=137.89  Aligned_cols=374  Identities=10%  Similarity=0.013  Sum_probs=202.6

Q ss_pred             eeeeeccCCcceEEEecCcceEEEEEcCccceeeeec------cccccceeeeEeecCccccccCCcEEEEEeC------
Q psy10942          7 CFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP------AYESLETCAVFHLSDETESKSGGKTFVLAGG------   74 (537)
Q Consensus         7 ~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   74 (537)
                      .+.|+  +|+++++..  ++.+.+||+++++....+.      +...+...  .++|        ++++|+.++      
T Consensus        21 ~~~W~--~d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~--~~Sp--------Dg~~i~~~~~~~~~~   86 (470)
T d2bgra1          21 SLRWI--SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDY--SISP--------DGQFILLEYNYVKQW   86 (470)
T ss_dssp             CCEEC--SSSEEEEES--SSCEEEEETTTCCEEEEECTTTTTTSSSCCCEE--EECT--------TSSEEEEEEEEEECS
T ss_pred             CCEeC--CCCEEEEEc--CCcEEEEECCCCCEEEEEchhhhhhccCcccee--EECC--------CCCEEEEEECCccee
Confidence            35567  788887754  5679999999998776544      12344555  5688        667777663      


Q ss_pred             ---ccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942         75 ---EKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE  151 (537)
Q Consensus        75 ---~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (537)
                         .++.+.+||+++++........+.+..+.|||||++||.. .++.+.+|+..+           ++..+....+.  
T Consensus        87 r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~-----------g~~~~~t~~~~--  152 (470)
T d2bgra1          87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN-----------LPSYRITWTGK--  152 (470)
T ss_dssp             SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT-----------SCCEECCSCCB--
T ss_pred             eeccCceEEEEECCCCcccccccCCccccccccccCcceeeEe-ecccceEEECCC-----------CceeeeeeccC--
Confidence               3577899999999876666666889999999999999996 457899999988           34333222111  


Q ss_pred             hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEE
Q psy10942        152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLL  231 (537)
Q Consensus       152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~  231 (537)
                                ......+.  .+                      .++..                    ..  .+....+
T Consensus       153 ----------~~~~~~g~--~d----------------------~~~~~--------------------~~--~~~~~~~  176 (470)
T d2bgra1         153 ----------EDIIYNGI--TD----------------------WVYEE--------------------EV--FSAYSAL  176 (470)
T ss_dssp             ----------TTTEEESB--CC----------------------HHHHH--------------------HT--SSSSBCE
T ss_pred             ----------CCcccccc--cc----------------------eeeee--------------------ee--cCCcccc
Confidence                      11111111  11                      22222                    12  3334556


Q ss_pred             eccCcccCCCeeeeccCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942        232 ERGKTVKEEDLFPRQSMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN  310 (537)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~  310 (537)
                         .|||||++|+....|.. +.  .|.+.........     ..........   .......+..+.+|++.++.....
T Consensus       177 ---~wSPDGk~ia~~~~d~~~v~--~~~~~~~~~~~~~-----~~~~~~~~~~---~~g~~~~~~~~~v~~~~~~~~~~~  243 (470)
T d2bgra1         177 ---WWSPNGTFLAYAQFNDTEVP--LIEYSFYSDESLQ-----YPKTVRVPYP---KAGAVNPTVKFFVVNTDSLSSVTN  243 (470)
T ss_dssp             ---EECTTSSEEEEEEEECTTCC--EEEEEECCSTTCS-----SCEEEEEECC---BTTSCCCEEEEEEEEGGGCCSSSC
T ss_pred             ---EECCCCCccceeEecCCcCc--eEEEEeeccCCCC-----CCeeeeeccc---cccccCCcceEEEEECCCcceeee
Confidence               79999999998776543 55  5544321100000     0000000000   000011234677888876643211


Q ss_pred             eec------ccccccCCCeEEEEEcCCCCEEEEEe-CCC---cEEEEEccC-CceeeEE-----EEe-------------
Q psy10942        311 VLR------GHKKGHEKDINCVTVSPNDKLLASGS-LDK---TVKVWSTTG-GLKLLNV-----LRG-------------  361 (537)
Q Consensus       311 ~~~------~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~---~i~i~d~~~-~~~~~~~-----~~~-------------  361 (537)
                      ...      .........+..+.|.++++.++... ..+   .+.++++.. .+.....     ...             
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~  323 (470)
T d2bgra1         244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE  323 (470)
T ss_dssp             CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred             ccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCC
Confidence            100      01112234567888998887666532 222   234444431 1111111     000             


Q ss_pred             -----cCCCCEEEEEcCCCcEEEE--ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE-EEEeCC
Q psy10942        362 -----HKKGTQIVSTGADGLLKLW--SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL-ISSSGD  433 (537)
Q Consensus       362 -----~~~~~~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d  433 (537)
                           ..++..++.+..+|..++|  +...+.... +......+..                 + ++++++.+ +++..+
T Consensus       324 ~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~~-lt~g~~~v~~-----------------~-~~~d~~~iyf~a~~~  384 (470)
T d2bgra1         324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIG-----------------I-EALTSDYLYYISNEY  384 (470)
T ss_dssp             CEECTTSSEEEEEEECTTSCEEEEEEETTCSCCEE-SCCSSSCEEE-----------------E-EEECSSEEEEEESCG
T ss_pred             ceeeecCCCcEEEEeccCcCceeEEEeccCCceee-eccCCeeEEE-----------------E-EEECCCEEEEEEecC
Confidence                 0112345566677766555  444444333 3223332222                 2 22222222 233222


Q ss_pred             C----c--EEEEECCCceeeeE----eecCCcceEEEEEecCCCEEEEE---eCCCcEEEEECCCCeeEEEecCCc
Q psy10942        434 A----T--IKLWCLTDYVCLKS----LEGHDASVLRCHFINKGTQIVST---GADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       434 g----~--i~i~d~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~s~---~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      +    .  |.-.++..+.....    +.+|...+.+++|||||++++..   ...-.+.+|+..+++.+..++.+.
T Consensus       385 ~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le~n~  460 (470)
T d2bgra1         385 KGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNS  460 (470)
T ss_dssp             GGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEECCH
T ss_pred             CCCcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEeccH
Confidence            1    1  33334443332222    34678889999999999998733   234458999999999999997643

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.57  E-value=6.7e-16  Score=141.95  Aligned_cols=334  Identities=8%  Similarity=-0.020  Sum_probs=199.2

Q ss_pred             EEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc
Q psy10942         69 FVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      .+++++.+|.|++|++.+++.+.++..        |+|++... .+..+.+.+++....             .......|
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpV--------fspd~~~g-~g~~~es~~vl~~~~-------------~~~~gd~h   70 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRELMRIPV--------FNVDSATG-WGITNESKEILGGDQ-------------QYLNGDCH   70 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEEEEEECS--------SSBCTTTC-TTTSHHHHHHHCSSS-------------CCSCCCBC
T ss_pred             EEEeCCCCCcEEEEeCCCCcEEEEEEe--------EcCCCCEE-EEECCccceEEeccc-------------ccccCccc
Confidence            366788999999999999999887753        78887542 223333333321111             11112234


Q ss_pred             hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC
Q psy10942        149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK  226 (537)
Q Consensus       149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~  226 (537)
                      ........++ +|+++|++.....   .+|                 .++|+       .++++.  +.    ..+  ..
T Consensus        71 hP~~s~t~gt-pDGr~lfV~d~~~---~rV-----------------avIDl-------~t~k~~~ii~----iP~--g~  116 (441)
T d1qnia2          71 HPHISMTDGR-YDGKYLFINDKAN---TRV-----------------ARIRL-------DIMKTDKITH----IPN--VQ  116 (441)
T ss_dssp             CCEEEEETTE-EEEEEEEEEETTT---TEE-----------------EEEET-------TTTEEEEEEE----CTT--CC
T ss_pred             CCCcceeccc-CCCCEEEEEcCCC---CEE-----------------EEEEC-------CCCcEeeEEe----cCC--CC
Confidence            4445555667 7788886654332   337                 77888       776654  22    134  56


Q ss_pred             eEEEEeccCcccCCCe--eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942        227 TVTLLERGKTVKEEDL--FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG  304 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~--l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~  304 (537)
                      .+..+   +|+|+|+.  ++..+.+..-.  ..+-....    .     ..           .      ...+..+|..+
T Consensus       117 gphgi---~~spdg~t~YV~~~~~~~v~~--~~dg~~~~----~-----~~-----------~------~~~~~~iD~~t  165 (441)
T d1qnia2         117 AIHGL---RLQKVPKTNYVFCNAEFVIPQ--PNDGTDFS----L-----DN-----------S------YTMFTAIDAET  165 (441)
T ss_dssp             CEEEE---EECCSSBCCEEEEEECSCEES--SCSSSCCC----G-----GG-----------E------EEEEEEEETTT
T ss_pred             Cccce---EEeccCCEEEEEeccCCcccc--cCcccccc----c-----cc-----------c------cceEEeecCcc
Confidence            78889   99999984  44334332211  11111100    0     00           0      02455678777


Q ss_pred             CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEEccCCceeeEEEEe---------cCCCCEEEEEcCC
Q psy10942        305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-TVKVWSTTGGLKLLNVLRG---------HKKGTQIVSTGAD  374 (537)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~---------~~~~~~l~~~~~d  374 (537)
                      .+....+.      -......++++|+|+++++.+.+. .+..++.. .......+..         .++|+++.. +.+
T Consensus       166 ~~v~~qI~------v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~-t~~~~d~i~v~n~p~~~~~~~dGk~~~v-~~~  237 (441)
T d1qnia2         166 MDVAWQVI------VDGNLDNTDADYTGKYATSTCYNSERAVDLAGT-MRNDRDWVVVFNVERIAAAVKAGNFKTI-GDS  237 (441)
T ss_dssp             CSEEEEEE------ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHH-TCSSBCEEEEEEHHHHHHHHHTTCCBCC-TTC
T ss_pred             ceeeEEEe------cCCCccceEECCCCCEEEEEecCCCceEEEecc-CcceEEEEEeCCccceEEEecCCCEEEe-CCC
Confidence            76543331      123467899999999999887654 23333332 2222221111         124554433 446


Q ss_pred             CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE-EeCCCcEEEEECCCcee-------
Q psy10942        375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS-SSGDATIKLWCLTDYVC-------  446 (537)
Q Consensus       375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~-------  446 (537)
                      +.+.+++....+.+..+....                  ....+.++|||+++++ +..+++|.+||+.+.+.       
T Consensus       238 ~v~vvd~~~~~~v~~~IPvgk------------------sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~  299 (441)
T d1qnia2         238 KVPVVDGRGESEFTRYIPVPK------------------NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIE  299 (441)
T ss_dssp             CCCEEECSSSCSSEEEECCBS------------------SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSC
T ss_pred             CcEEEEcccCCceEEEEeCCC------------------CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCC
Confidence            677777766666666655443                  4566899999998765 56789999999876321       


Q ss_pred             -eeEeecCC---cceEEEEEecCCCEEEEEeCCCcEEEEECCC----------CeeEEEe-----cCCccceeccCCCCC
Q psy10942        447 -LKSLEGHD---ASVLRCHFINKGTQIVSTGADGLLKLWSIKT----------STCVSTF-----DKHALKIRNSDSEND  507 (537)
Q Consensus       447 -~~~~~~~~---~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~----------~~~~~~~-----~~~~~~i~~~~~~~~  507 (537)
                       ...+.++.   -.....+|+++|..+.+...|..|..|++..          ...+..+     .+|...+        
T Consensus       300 ~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~--------  371 (441)
T d1qnia2         300 LRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHAS--------  371 (441)
T ss_dssp             GGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEET--------
T ss_pred             cceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccc--------
Confidence             11111111   1235568999998888899999999999741          1233444     4676666        


Q ss_pred             CccccccceeeecCCCEEEEEe
Q psy10942        508 HKGFGLPRQLCSRNSDCEYRGG  529 (537)
Q Consensus       508 ~~~~~~~~~~~s~~~~~l~s~~  529 (537)
                         .+.   +++|||++|++++
T Consensus       372 ---~~~---t~~pdGk~l~s~~  387 (441)
T d1qnia2         372 ---LTE---SRDADGKWLVVLS  387 (441)
T ss_dssp             ---TTT---STTCCCCEEEEEE
T ss_pred             ---ccc---ccCCCCcEEEecC
Confidence               778   9999999999994

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.56  E-value=2e-14  Score=133.48  Aligned_cols=282  Identities=5%  Similarity=-0.111  Sum_probs=168.8

Q ss_pred             cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccCcccccccccceeEEe
Q psy10942         76 KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETGLEERPNKILKFRKQF  145 (537)
Q Consensus        76 ~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  145 (537)
                      ...|.+||..+++.+.....+.. ..++|+|||++|++++          .|+.|++||..+           .+....+
T Consensus        45 ~~~~~~~d~~~~~~~~~~~~~~~-~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t-----------~~~~~~i  112 (368)
T d1mdah_          45 TTENWVSCAGCGVTLGHSLGAFL-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-----------FLPIADI  112 (368)
T ss_dssp             SEEEEEEETTTTEEEEEEEECTT-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-----------CCEEEEE
T ss_pred             cceEEEEeCCCCcEEEEEeCCCC-CcceECCCCCEEEEEcccCccccccccCCeEEEEECCC-----------CcEeeee
Confidence            34577779999998887765432 3689999999998865          367899999998           6666666


Q ss_pred             ecchh-------hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942        146 VGFSD-------EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN  216 (537)
Q Consensus       146 ~~~~~-------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~  216 (537)
                      ..+..       ....++|+ +|+++++++..+.   +.+                 .+||+       .+.+..  +. 
T Consensus       113 ~~p~~~~~~~g~~p~~~a~S-pDGk~l~va~~~~---~~v-----------------~~~d~-------~~~~~~~~~~-  163 (368)
T d1mdah_         113 ELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGS---SAA-----------------AGLSV-------PGASDDQLTK-  163 (368)
T ss_dssp             EETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSS---SCE-----------------EEEEE-------TTTEEEEEEE-
T ss_pred             cCCccceecccCCccceEEC-CCCCEEEEEeCCC---CeE-----------------EEEEC-------CCCcEeEEee-
Confidence            54432       23568898 7888887765322   337                 78887       655544  22 


Q ss_pred             cccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942        217 TERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK  295 (537)
Q Consensus       217 ~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~  295 (537)
                          .+  ...       ...| ....++..+.||.+.  +|+.......                              
T Consensus       164 ----~~--~~~-------~~~~~~~~~~v~~~~Dg~~~--~~~~~~~~~~------------------------------  198 (368)
T d1mdah_         164 ----SA--SCF-------HIHPGAAATHYLGSCPASLA--ASDLAAAPAA------------------------------  198 (368)
T ss_dssp             ----CS--SCC-------CCEEEETTEEECCCCTTSCE--EEECCSSCCC------------------------------
T ss_pred             ----cc--Ccc-------eEccCCCceEEEEcCCCCEE--EEEecCCcee------------------------------
Confidence                22  111       1122 234555566666666  6665542110                              


Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCC
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG  375 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~  375 (537)
                         .|...         ......+...+....+.+++..+.+.  ++.+++++.. ...                     
T Consensus       199 ---~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~-~~~---------------------  242 (368)
T d1mdah_         199 ---AGIVG---------AQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIP-AAG---------------------  242 (368)
T ss_dssp             ---CEECC---------CCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECC-SSC---------------------
T ss_pred             ---eeeee---------cccccccccceeecccccCcEEEEec--CCCEEEEeec-CCc---------------------
Confidence               00000         01112233344456777777655543  4556666665 211                     


Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---------CcEEEEECCCcee
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---------ATIKLWCLTDYVC  446 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~i~i~d~~~~~~  446 (537)
                       +.+++...........        ..+.|.       ....++++|++..++....+         ..|.+||..+++.
T Consensus       243 -~~~~~~~~~~~~~~~~--------~~~~~~-------g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~  306 (368)
T d1mdah_         243 -ATMKAAIDGNESGRKA--------DNFRSA-------GFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT  306 (368)
T ss_dssp             -CEEECCCCSSCTHHHH--------TTEEEC-------SSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE
T ss_pred             -eEEEeecccccceeee--------eeecCC-------CceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcE
Confidence             1112211111100000        001111       23346677777766554322         3589999999998


Q ss_pred             eeEeecCCcceEEEEEecCCC-E-EEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        447 LKSLEGHDASVLRCHFINKGT-Q-IVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       447 ~~~~~~~~~~v~~~~~s~~~~-~-l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      +..+.. ...+.+++|+|||+ + ++++..|+.|++||..+++.+..++...
T Consensus       307 ~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         307 SGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             eEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence            888773 46789999999997 3 4566778999999999999999887544

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.56  E-value=2.4e-14  Score=131.54  Aligned_cols=324  Identities=11%  Similarity=0.039  Sum_probs=192.6

Q ss_pred             EEEecCcceEEEEEcCccceeeeeccccccceeeeE--------------------eecCcc-ccccCCcEEEEE-eCcc
Q psy10942         19 SVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVF--------------------HLSDET-ESKSGGKTFVLA-GGEK   76 (537)
Q Consensus        19 l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~~~~~~~~~~~-~~~~   76 (537)
                      ++|++.+|.|++|++.+++.+++++.+.+-......                    ..|... ...+.+++++++ ...+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            778889999999999999999998854321100000                    001000 001125666654 5678


Q ss_pred             ceEEeeeccceehhhhcC--CCcceEEEEEeccccE--EEEEeCCc-----------------eEEEEecccccCccccc
Q psy10942         77 SLLHYYETSAVKELYQHG--LSSPLVRIVRSSVKRM--YAVVTADH-----------------NISLYRLNSETGLEERP  135 (537)
Q Consensus        77 ~~i~~wd~~~~~~~~~~~--~~~~v~~~~~s~~~~~--la~~~~d~-----------------~i~iwd~~~~~~~~~~~  135 (537)
                      +.|.++|+.+++....+.  ....+..++|+|||+.  ++..+.+.                 .+..+|..+        
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t--------  165 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAET--------  165 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTT--------
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcc--------
Confidence            899999999998766554  3468999999999994  44433321                 234466666        


Q ss_pred             ccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--
Q psy10942        136 NKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--  213 (537)
Q Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--  213 (537)
                         .+...++.... ....+.|+ ++++++++++.+..   .+                 ..++.       .+....  
T Consensus       166 ---~~v~~qI~v~~-~p~~v~~s-pdGk~a~vt~~nse---~~-----------------~~id~-------~t~~~~d~  213 (441)
T d1qnia2         166 ---MDVAWQVIVDG-NLDNTDAD-YTGKYATSTCYNSE---RA-----------------VDLAG-------TMRNDRDW  213 (441)
T ss_dssp             ---CSEEEEEEESS-CCCCEEEC-SSSSEEEEEESCTT---CC-----------------SSHHH-------HTCSSBCE
T ss_pred             ---ceeeEEEecCC-CccceEEC-CCCCEEEEEecCCC---ce-----------------EEEec-------cCcceEEE
Confidence               55555555433 47889999 78888776665443   13                 33344       332222  


Q ss_pred             ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942        214 KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL  293 (537)
Q Consensus       214 l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  293 (537)
                      +.     .   ...-..+   .++|+|+++..++ ++.+.  ++.....                               
T Consensus       214 i~-----v---~n~p~~~---~~~~dGk~~~v~~-~~v~v--vd~~~~~-------------------------------  248 (441)
T d1qnia2         214 VV-----V---FNVERIA---AAVKAGNFKTIGD-SKVPV--VDGRGES-------------------------------  248 (441)
T ss_dssp             EE-----E---EEHHHHH---HHHHTTCCBCCTT-CCCCE--EECSSSC-------------------------------
T ss_pred             EE-----e---CCccceE---EEecCCCEEEeCC-CCcEE--EEcccCC-------------------------------
Confidence            11     1   1111233   6778888776544 44554  5443331                               


Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEc
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS-GSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG  372 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~  372 (537)
                                  ...     ..+.... ....+.++|||+++++ +..++++.+||+..-.+.   +.            
T Consensus       249 ------------~v~-----~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~---~~------------  295 (441)
T d1qnia2         249 ------------EFT-----RYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL---FE------------  295 (441)
T ss_dssp             ------------SSE-----EEECCBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH---TT------------
T ss_pred             ------------ceE-----EEEeCCC-CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhH---hh------------
Confidence                        110     0011111 2356899999998765 567899999998721110   00            


Q ss_pred             CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---------
Q psy10942        373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---------  443 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------  443 (537)
                                          .......++...++...    +....+|+++|..+.+...|..|..|++..         
T Consensus       296 --------------------~~~~~~~~~~~~~~~gl----gplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~  351 (441)
T d1qnia2         296 --------------------DKIELRDTIVAEPELGL----GPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDR  351 (441)
T ss_dssp             --------------------TSSCGGGGEEECCBCCS----CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCC
T ss_pred             --------------------ccCCcceEEEeeccccc----CcccceecCCceEEEcccccceEEEeccchhhhhhccCC
Confidence                                00001111111111111    455678999998888999999999999742         


Q ss_pred             -ceeeeEe-----ecCCcceEEEEEecCCCEEEEE---eCCCc----------EEEEECC
Q psy10942        444 -YVCLKSL-----EGHDASVLRCHFINKGTQIVST---GADGL----------LKLWSIK  484 (537)
Q Consensus       444 -~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~---~~dg~----------v~vwd~~  484 (537)
                       ...+..+     .+|...+.+.+++|||++|+++   +.|..          -.+.|+.
T Consensus       352 ~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~  411 (441)
T d1qnia2         352 VNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPLHPENDQLIDIS  411 (441)
T ss_dssp             CCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGSCCCSSSCCEEEEEEECS
T ss_pred             CceeEeccccccCCCCCccccccccCCCCcEEEecCccccccCcCCCCCCCccceeEEec
Confidence             1233333     5677777888899999999999   44542          4667774

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.55  E-value=1.9e-14  Score=133.68  Aligned_cols=113  Identities=4%  Similarity=-0.158  Sum_probs=79.4

Q ss_pred             CCcce--EE-EecCc--ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEe----------Cccce
Q psy10942         14 ITSEF--SV-HCGRD--KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAG----------GEKSL   78 (537)
Q Consensus        14 ~~~~~--l~-s~~~~--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~   78 (537)
                      ++++.  ++ +...+  ..|.+||..+++.+..++.... ..+  .++|        ++++++++          ..++.
T Consensus        29 ~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~-~~~--a~sp--------Dg~~i~~~~~~~~~~~~g~~d~~   97 (368)
T d1mdah_          29 AISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-SLA--VAGH--------SGSDFALASTSFARSAKGKRTDY   97 (368)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-CEE--EECT--------TSSCEEEEEEEETTTTSSSEEEE
T ss_pred             CCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCC-Ccc--eECC--------CCCEEEEEcccCccccccccCCe
Confidence            56553  33 23444  4477779999999988774332 244  5677        55666654          35788


Q ss_pred             EEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeEEeecc
Q psy10942         79 LHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRKQFVGF  148 (537)
Q Consensus        79 i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  148 (537)
                      |.+||..+++.+..+..+        .....++|||||++|+++. .++.+.+||+.+           .+....+..+
T Consensus        98 v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~-----------~~~~~~~~~~  165 (368)
T d1mdah_          98 VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG-----------ASDDQLTKSA  165 (368)
T ss_dssp             EEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETT-----------TEEEEEEECS
T ss_pred             EEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCC-----------CcEeEEeecc
Confidence            999999999887765432        2344689999999998876 578999999999           6666666544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.52  E-value=1.4e-13  Score=132.16  Aligned_cols=113  Identities=8%  Similarity=0.020  Sum_probs=84.6

Q ss_pred             eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-----ecchhhhhhhhcccCCCccEEEeeeccc
Q psy10942         99 LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-----VGFSDEILDIALLGEEDSHIVVASNEYL  173 (537)
Q Consensus        99 v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~~~~  173 (537)
                      -..+.|.+|++++..  .++.+.+||+.+           ++....+     ..|...|.++.|+ ||+++|++++....
T Consensus        19 ~~~~~W~~d~~~~~~--~~~~~~~~~~~t-----------~~~~~~~~~~~~~~~~~~i~~~~~S-pDg~~i~~~~~~~~   84 (470)
T d2bgra1          19 LYSLRWISDHEYLYK--QENNILVFNAEY-----------GNSSVFLENSTFDEFGHSINDYSIS-PDGQFILLEYNYVK   84 (470)
T ss_dssp             CCCCEECSSSEEEEE--SSSCEEEEETTT-----------CCEEEEECTTTTTTSSSCCCEEEEC-TTSSEEEEEEEEEE
T ss_pred             ccCCEeCCCCEEEEE--cCCcEEEEECCC-----------CCEEEEEchhhhhhccCccceeEEC-CCCCEEEEEECCcc
Confidence            345789999988764  578899999999           3443333     3445678999999 88999988765332


Q ss_pred             -----cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942        174 -----NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS  247 (537)
Q Consensus       174 -----~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~  247 (537)
                           ..+.+                 .+||+       .+++.. +.     .+  ...+..+   .|||||+++|...
T Consensus        85 ~~r~s~~~~~-----------------~l~d~-------~~~~~~~l~-----~~--~~~~~~~---~~SPDG~~ia~~~  130 (470)
T d2bgra1          85 QWRHSYTASY-----------------DIYDL-------NKRQLITEE-----RI--PNNTQWV---TWSPVGHKLAYVW  130 (470)
T ss_dssp             CSSSCEEEEE-----------------EEEET-------TTTEECCSS-----CC--CTTEEEE---EECSSTTCEEEEE
T ss_pred             eeeeccCceE-----------------EEEEC-------CCCcccccc-----cC--Ccccccc---ccccCcceeeEee
Confidence                 01235                 78898       877766 77     88  8889999   9999999999854


Q ss_pred             CCCcceeccccccCC
Q psy10942        248 MEPSTLEELEKRKTY  262 (537)
Q Consensus       248 ~d~~i~~~iw~~~~~  262 (537)
                       ++.+.  +|+...+
T Consensus       131 -~~~l~--~~~~~~g  142 (470)
T d2bgra1         131 -NNDIY--VKIEPNL  142 (470)
T ss_dssp             -TTEEE--EESSTTS
T ss_pred             -cccce--EEECCCC
Confidence             56788  8888774

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.05  E-value=4.5e-07  Score=82.46  Aligned_cols=136  Identities=11%  Similarity=0.038  Sum_probs=76.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCce-eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942        320 EKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLK-LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK  397 (537)
Q Consensus       320 ~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  397 (537)
                      ....+.++|+|+++++++.. .++.|.+|++..... .+......+               ++...............  
T Consensus       192 g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~--  254 (365)
T d1jofa_         192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP---------------LIPPGIPDRDPETGKGL--  254 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE---------------SSCTTCCCBCTTTSSBS--
T ss_pred             CCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeec---------------ccccccccccccccccc--
Confidence            35678999999999886665 578899999873221 111111100               00000000000000000  


Q ss_pred             eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC------CCcEEEEECCCceeeeE---e---ecCCcceEEEEEec-
Q psy10942        398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSG------DATIKLWCLTDYVCLKS---L---EGHDASVLRCHFIN-  464 (537)
Q Consensus       398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~---~---~~~~~~v~~~~~s~-  464 (537)
                                     .....+.++|||++|+++..      .+.|..|++.....+..   +   .........++++| 
T Consensus       255 ---------------~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~  319 (365)
T d1jofa_         255 ---------------YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW  319 (365)
T ss_dssp             ---------------EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred             ---------------CCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCC
Confidence                           04566889999999887743      22377777654221111   1   11234467799998 


Q ss_pred             CCCEEEEEe-CCCcEEEEECCCCe
Q psy10942        465 KGTQIVSTG-ADGLLKLWSIKTST  487 (537)
Q Consensus       465 ~~~~l~s~~-~dg~v~vwd~~~~~  487 (537)
                      +|++|+++. .++.|.+|+++...
T Consensus       320 ~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         320 SDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             CTTEEEEECSSSCEEEEEEEETTE
T ss_pred             CCCEEEEEeCCCCeEEEEEEeCCc
Confidence            899887775 57899999875543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.3e-07  Score=87.18  Aligned_cols=107  Identities=10%  Similarity=0.041  Sum_probs=70.4

Q ss_pred             eeeccCCcceEEEecCcceEEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEe---------Cccc
Q psy10942          9 DVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAG---------GEKS   77 (537)
Q Consensus         9 ~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~   77 (537)
                      .++  +++.+++. ..+|.|.+||+++++....+.  ..+......+.++|        ++++++..         +..+
T Consensus        23 ~W~--~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Sp--------D~~~vl~~~~~~~~~r~s~~~   91 (465)
T d1xfda1          23 KWI--SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP--------DREYALFSYNVEPIYQHSYTG   91 (465)
T ss_dssp             CBS--SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT--------TSSEEEEEESCCCCSSSCCCS
T ss_pred             EEe--CCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECC--------CCCeEEEEEcccceeEeeccc
Confidence            455  67766654 456789999999887644333  22223333345677        55665554         3356


Q ss_pred             eEEeeeccceehhhh--cC-CCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         78 LLHYYETSAVKELYQ--HG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~--~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      .+.++|+.+++....  .. ....+....|||||+.||... ++.|.+.+..+
T Consensus        92 ~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~  143 (465)
T d1xfda1          92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVG  143 (465)
T ss_dssp             EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSS
T ss_pred             cEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCC
Confidence            789999998765322  22 234677789999999999876 46788888776

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=2.1e-08  Score=87.53  Aligned_cols=80  Identities=18%  Similarity=0.147  Sum_probs=53.7

Q ss_pred             eEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCc---eEEEEecccccCcccccccccceeEEeecchhhhhh
Q psy10942         78 LLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADH---NISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD  154 (537)
Q Consensus        78 ~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  154 (537)
                      .|.+.|.............+.+.+.+|||||++||......   .+.+.+..+            .....+..+......
T Consensus        20 ~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~   87 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN------------GAVRQVASFPRHNGA   87 (269)
T ss_dssp             EEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT------------CCEEEEECCSSCEEE
T ss_pred             EEEEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeeccc------------CceeEEeeeeccccc
Confidence            46676766444444445667889999999999999876533   355556555            233455556666778


Q ss_pred             hhcccCCCccEEEeee
Q psy10942        155 IALLGEEDSHIVVASN  170 (537)
Q Consensus       155 ~~~~~~~~~~l~~~~~  170 (537)
                      ..|+ +++..++....
T Consensus        88 ~~~s-pdg~~i~~~~~  102 (269)
T d2hqsa1          88 PAFS-PDGSKLAFALS  102 (269)
T ss_dssp             EEEC-TTSSEEEEEEC
T ss_pred             ceec-CCCCeeeEeee
Confidence            8899 67777766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.00  E-value=3.8e-07  Score=82.97  Aligned_cols=241  Identities=7%  Similarity=0.065  Sum_probs=135.7

Q ss_pred             EEEEEe--CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe---
Q psy10942        287 LLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG---  361 (537)
Q Consensus       287 ~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---  361 (537)
                      .|+.|+  ..+.|..+.++...................+..|+|+|+++.|+++.. +.+..|.+............   
T Consensus         4 ~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~   82 (365)
T d1jofa_           4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIG   82 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCC
Confidence            456664  356787665554432222212222233455677999999999988765 56888877744443333221   


Q ss_pred             --------cCCCCE--EEEEc-CCCcEEEEECCCC-------------e---eeeee-ccCCcceEEEEEecCCCceEEe
Q psy10942        362 --------HKKGTQ--IVSTG-ADGLLKLWSIKTS-------------T---CVSTF-DKHALKIWTLAITKDENQIITG  413 (537)
Q Consensus       362 --------~~~~~~--l~~~~-~d~~i~i~d~~~~-------------~---~~~~~-~~~~~~i~~~~~~~~~~~~~~~  413 (537)
                              .++++.  ++++. ..+.+..+.+...             .   ..... ......+..+.++|++++++..
T Consensus        83 ~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~  162 (365)
T d1jofa_          83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA  162 (365)
T ss_dssp             SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred             CCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEe
Confidence                    122443  33322 2345554433211             0   01111 1122346789999999877653


Q ss_pred             -------------------------------eeeEEEEcCCCCEEEEEe-CCCcEEEEECCCceee--eEee--------
Q psy10942        414 -------------------------------GVWFVNFSPLDRILISSS-GDATIKLWCLTDYVCL--KSLE--------  451 (537)
Q Consensus       414 -------------------------------~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~--------  451 (537)
                                                     +...++|+|+++++.+.. .+++|.+|++...+..  ....        
T Consensus       163 d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~  242 (365)
T d1jofa_         163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG  242 (365)
T ss_dssp             ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred             eCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccc
Confidence                                           366799999999886665 4789999998764322  1111        


Q ss_pred             ---------cCCcceEEEEEecCCCEEEEEeC------CCcEEEEECCCCeeEE-EecCCccceeccCCCCCCccccccc
Q psy10942        452 ---------GHDASVLRCHFINKGTQIVSTGA------DGLLKLWSIKTSTCVS-TFDKHALKIRNSDSENDHKGFGLPR  515 (537)
Q Consensus       452 ---------~~~~~v~~~~~s~~~~~l~s~~~------dg~v~vwd~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~  515 (537)
                               .+......+.++|||++|+++..      ...|..|++.....+. ....+....      ....+..+  
T Consensus       243 ~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~------~G~~p~~i--  314 (365)
T d1jofa_         243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT------SGGHSNAV--  314 (365)
T ss_dssp             CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS------CCTTCCCE--
T ss_pred             ccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEc------CCCCccEE--
Confidence                     11223567899999999987743      1237777765432222 111000000      00112667  


Q ss_pred             eeeec-CCCEEEEEe-CCCCEEeC
Q psy10942        516 QLCSR-NSDCEYRGG-WSPQVVVY  537 (537)
Q Consensus       516 ~~~s~-~~~~l~s~~-~dg~i~vW  537 (537)
                       +++| +|++|++++ .++.|.+|
T Consensus       315 -~~~p~~G~~l~va~~~s~~v~v~  337 (365)
T d1jofa_         315 -SPCPWSDEWMAITDDQEGWLEIY  337 (365)
T ss_dssp             -EECTTCTTEEEEECSSSCEEEEE
T ss_pred             -EecCCCCCEEEEEeCCCCeEEEE
Confidence             9998 899888774 56778876

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.98  E-value=1.7e-08  Score=89.58  Aligned_cols=250  Identities=9%  Similarity=0.005  Sum_probs=141.3

Q ss_pred             eehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942         87 VKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV  166 (537)
Q Consensus        87 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  166 (537)
                      .+.+..+.....+..++++|||+++++...+++|..|+...            + ...+......+.+++|. ++++.++
T Consensus        18 ~~v~~~~p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g------------~-~~~~~~~~~~~~gla~~-~dG~l~v   83 (302)
T d2p4oa1          18 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDG------------N-QQIHATVEGKVSGLAFT-SNGDLVA   83 (302)
T ss_dssp             EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC------------C-EEEEEECSSEEEEEEEC-TTSCEEE
T ss_pred             ccEEEECCCCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCC------------C-EEEEEcCCCCcceEEEc-CCCCeEE
Confidence            34444444445688999999999999988899888888665            1 23344455668899999 6776555


Q ss_pred             EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942        167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLF  243 (537)
Q Consensus       167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l  243 (537)
                      +......    +                 ..|+.       ......   +.   ....  ......+   .+.++++++
T Consensus        84 ~~~~~~~----~-----------------~~~~~-------~~~~~~~~~~~---~~~~--~~~~n~i---~~~~~g~~~  127 (302)
T d2p4oa1          84 TGWNADS----I-----------------PVVSL-------VKSDGTVETLL---TLPD--AIFLNGI---TPLSDTQYL  127 (302)
T ss_dssp             EEECTTS----C-----------------EEEEE-------ECTTSCEEEEE---ECTT--CSCEEEE---EESSSSEEE
T ss_pred             EecCCce----E-----------------EEEEe-------cccccceeecc---ccCC--cccccee---EEccCCCEE
Confidence            4444333    4                 33333       211111   11   0022  4556778   888888887


Q ss_pred             eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942        244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI  323 (537)
Q Consensus       244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v  323 (537)
                      ++.+.++.+.  .++...                                 +...+|-......     ...........
T Consensus       128 v~~~~~~~i~--~~~~~~---------------------------------~~~~~~~~~~~~~-----~~~~~~~~~~~  167 (302)
T d2p4oa1         128 TADSYRGAIW--LIDVVQ---------------------------------PSGSIWLEHPMLA-----RSNSESVFPAA  167 (302)
T ss_dssp             EEETTTTEEE--EEETTT---------------------------------TEEEEEEECGGGS-----CSSTTCCSCSE
T ss_pred             eeccccccce--eeeccC---------------------------------CcceeEecCCccc-----eeeccCccccc
Confidence            7766666555  444443                                 2222222221110     01111222345


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      ..+.++. +.++++.+..+.|..++.......... .       ...                      ..         
T Consensus       168 ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~-~-------~~~----------------------~~---------  207 (302)
T d2p4oa1         168 NGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEP-E-------IFV----------------------EQ---------  207 (302)
T ss_dssp             EEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCC-E-------EEE----------------------ES---------
T ss_pred             ccccccC-CceeeecCCCCeEEecccccccccccc-c-------ccc----------------------CC---------
Confidence            6666653 345555566777777776522111000 0       000                      00         


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce-eeeEeecCCcceEEEEE---ecCCCEEEEEeCC
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV-CLKSLEGHDASVLRCHF---INKGTQIVSTGAD  475 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~---s~~~~~l~s~~~d  475 (537)
                               .....++++++|+++++...++.|..++..... .+......-...++++|   ++|++.|+.++..
T Consensus       208 ---------~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         208 ---------TNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             ---------CCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             ---------CCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence                     033458999999988888888999999765422 22233333445789999   6788888766554

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.97  E-value=1.2e-07  Score=82.98  Aligned_cols=235  Identities=11%  Similarity=0.107  Sum_probs=138.3

Q ss_pred             eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc-cccce-----eeeeeCCcceEEEEEeCCCeEEEE
Q psy10942        227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV-PEAEH-----GAFYTGGTVELLASGSLDKTVKVW  300 (537)
Q Consensus       227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~v~~l~~~~~d~~i~i~  300 (537)
                      ....+   +++++|+.+++-..++.|+  +|+.+..-........ +....     ...........++..+.++.|..+
T Consensus        24 ~P~gv---avd~dg~i~VaD~~n~rI~--v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~   98 (279)
T d1q7fa_          24 EPSGV---AVNAQNDIIVADTNNHRIQ--IFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY   98 (279)
T ss_dssp             CEEEE---EECTTCCEEEEEGGGTEEE--EECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred             CccEE---EEcCCCCEEEEECCCCEEE--EEeCCCCEEEEecccCCCcccccccccccccccccccceeccCCccccccc
Confidence            46788   8999999888877788898  8886642100000000 00000     000000111223333445566666


Q ss_pred             ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942        301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW  380 (537)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~  380 (537)
                      +...... ..    ...........+++.++++++++....+.+.+++..  .+.+..+...                  
T Consensus        99 ~~~g~~~-~~----~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~--g~~~~~~g~~------------------  153 (279)
T d1q7fa_          99 NQYGQFV-RK----FGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGCS------------------  153 (279)
T ss_dssp             CTTSCEE-EE----ECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECT------------------
T ss_pred             cccccce-ee----cCCCcccccceeccccCCcEEEEeeccceeeEeccC--Cceeeccccc------------------
Confidence            6543321 11    112233456677777777766666555555555543  2222222110                  


Q ss_pred             ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee--cCCcceE
Q psy10942        381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE--GHDASVL  458 (537)
Q Consensus       381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~  458 (537)
                                  .+..                 ....+++.++++++++....+.|++||.. ++.+.++.  +......
T Consensus       154 ------------~~~~-----------------~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~  203 (279)
T d1q7fa_         154 ------------KHLE-----------------FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPI  203 (279)
T ss_dssp             ------------TTCS-----------------SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEE
T ss_pred             ------------cccc-----------------ccceeeeccceeEEeeeccccceeeeecC-CceeeeecccccccCCc
Confidence                        0111                 56677888888888888888999999964 56666663  3445578


Q ss_pred             EEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEEecCCc--cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        459 RCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVSTFDKHA--LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       459 ~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      .+++.++|+++++-.. ++.|.+|+. +|+.+..+....  ...           ..+   ++.|||.++ +++.+..|+
T Consensus       204 giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p-----------~~v---av~~dG~l~-V~~~n~~v~  267 (279)
T d1q7fa_         204 GVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC-----------FDV---ALMDDGSVV-LASKDYRLY  267 (279)
T ss_dssp             EEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE-----------EEE---EEETTTEEE-EEETTTEEE
T ss_pred             ccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCE-----------eEE---EEeCCCcEE-EEeCCCeEE
Confidence            9999999997776544 456999984 788877764332  123           677   999999755 456788898


Q ss_pred             eC
Q psy10942        536 VY  537 (537)
Q Consensus       536 vW  537 (537)
                      +|
T Consensus       268 ~f  269 (279)
T d1q7fa_         268 IY  269 (279)
T ss_dssp             EE
T ss_pred             EE
Confidence            86

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.92  E-value=1e-07  Score=84.53  Aligned_cols=188  Identities=9%  Similarity=-0.008  Sum_probs=113.6

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee------------eEEEEecCCCCEEEEEcCCCcEEEEECCCCeee
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL------------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV  388 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~------------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  388 (537)
                      ..+.+++|+|+|+++++...++.+..++.......            ..-+...+++.++++.+.++.+..+|...+...
T Consensus        68 ~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~  147 (302)
T d2p4oa1          68 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS  147 (302)
T ss_dssp             SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcce
Confidence            45789999999999999888888888876532222            233344556777777777788888887766433


Q ss_pred             eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE--eecCCcceEEEEEecCC
Q psy10942        389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKG  466 (537)
Q Consensus       389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~  466 (537)
                      ..........       ............+.++. +.++++.+..+.|..++.........  ..........+++.++|
T Consensus       148 ~~~~~~~~~~-------~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG  219 (302)
T d2p4oa1         148 IWLEHPMLAR-------SNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEG  219 (302)
T ss_dssp             EEEECGGGSC-------SSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTC
T ss_pred             eEecCCccce-------eeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCC
Confidence            2221110000       00000000334455543 23455556678888888765332211  11123446789999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEec--CCccceeccCCCCCCccccccceee---ecCCCEEEEEeCC
Q psy10942        467 TQIVSTGADGLLKLWSIKTSTCVSTFD--KHALKIRNSDSENDHKGFGLPRQLC---SRNSDCEYRGGWS  531 (537)
Q Consensus       467 ~~l~s~~~dg~v~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~---s~~~~~l~s~~~d  531 (537)
                      +++++...++.|..++.. ++......  ..-...           +++   +|   ++|++.|+.++..
T Consensus       220 ~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~p-----------t~v---afg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         220 NLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS-----------TAV---AFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             CEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE-----------EEE---EECCSTTTTTEEEEEECT
T ss_pred             CEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCc-----------eEE---EEcCCCCCCCEEEEECCC
Confidence            988888889999999874 44333322  222233           677   99   7788988876544

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=1.6e-06  Score=75.16  Aligned_cols=201  Identities=11%  Similarity=0.010  Sum_probs=111.4

Q ss_pred             eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEccCCcee--------eEEEEecCC
Q psy10942        296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---TVKVWSTTGGLKL--------LNVLRGHKK  364 (537)
Q Consensus       296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~--------~~~~~~~~~  364 (537)
                      .|.+.|.+....      ..+..+...+...+|||||+.||......   .+.+.+.......        .......++
T Consensus        20 ~l~i~d~dG~~~------~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd   93 (269)
T d2hqsa1          20 ELRVSDYDGYNQ------FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPD   93 (269)
T ss_dssp             EEEEEETTSCSC------EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTT
T ss_pred             EEEEEcCCCCCc------EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCC
Confidence            588888876653      23345567788999999999999775443   3555565522111        122333445


Q ss_pred             CCEEEEEcC-CCcEEE--EECCCCeeeeeeccCCcceEEEEEecCCCceEE---------------------------ee
Q psy10942        365 GTQIVSTGA-DGLLKL--WSIKTSTCVSTFDKHALKIWTLAITKDENQIIT---------------------------GG  414 (537)
Q Consensus       365 ~~~l~~~~~-d~~i~i--~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~  414 (537)
                      +..++.... ++...+  +........... ..........+++++..+..                           +.
T Consensus        94 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~  172 (269)
T d2hqsa1          94 GSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQ  172 (269)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSE
T ss_pred             CCeeeEeeecCCccceeecccccccceeee-eccccccccccccccccceecccccCCceEeeeecccccceeeeccccc
Confidence            555554332 222222  222222111111 11111112222222222111                           13


Q ss_pred             eeEEEEcCCCCEEEEEeCCC-c--EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC---CCcEEEEECCCCee
Q psy10942        415 VWFVNFSPLDRILISSSGDA-T--IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA---DGLLKLWSIKTSTC  488 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg-~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---dg~v~vwd~~~~~~  488 (537)
                      .....|+|+++.++..+.++ .  +.+.+...+..  .+..+........|||||+.|+..+.   ...++++++..+..
T Consensus       173 ~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         173 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK  250 (269)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred             ccccccccccceeEEEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence            56678999999888776543 3  44445554433  33335566778899999999986554   34688999976554


Q ss_pred             EEEecCCccceeccCCCCCCccccccceeeec
Q psy10942        489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSR  520 (537)
Q Consensus       489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~  520 (537)
                       ..+......+           ...   +|||
T Consensus       251 -~~lt~~~g~~-----------~~p---~WSP  267 (269)
T d2hqsa1         251 -ARLPATDGQV-----------KFP---AWSP  267 (269)
T ss_dssp             -EECCCSSSEE-----------EEE---EECC
T ss_pred             -EEEeCCCCcE-----------EeE---EeCC
Confidence             4555556666           666   8988

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.82  E-value=3.5e-07  Score=78.86  Aligned_cols=181  Identities=7%  Similarity=-0.037  Sum_probs=106.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee---------EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942        322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL---------NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD  392 (537)
Q Consensus       322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~---------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  392 (537)
                      ....++++++++++++....+.+++++.. ....+         ..+...+++.++++-..+..+..++...........
T Consensus        58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~-~~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~  136 (260)
T d1rwia_          58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGS-NNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF  136 (260)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTC-SCCEECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCC
T ss_pred             CceEEEEcCCCCEEEeeeeeceeeeeeec-cceeeeeeeeeeecccccccccceeEeeccccccccccccccceeeeeee
Confidence            34678999999887776666666655433 22221         122222333333333333333333332221111000


Q ss_pred             cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE
Q psy10942        393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST  472 (537)
Q Consensus       393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  472 (537)
                      ...                 .....++++|+++++++...++.|..++...................+++.++|+++++.
T Consensus       137 ~~~-----------------~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd  199 (260)
T d1rwia_         137 TGL-----------------NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE  199 (260)
T ss_dssp             CSC-----------------CSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred             ccc-----------------CCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeee
Confidence            000                 145678999999988888888899999987644333333344567899999999988888


Q ss_pred             eCCCcEEEEECCCCeeEEEec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        473 GADGLLKLWSIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       473 ~~dg~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      ...+.|..++...... ..+. ..-...           .+|   +++++|.++++-..++.|+
T Consensus       200 ~~~~~i~~~~~~~~~~-~~~~~~~~~~P-----------~~i---~~d~~g~l~vad~~~~rI~  248 (260)
T d1rwia_         200 HNTNQVVKLLAGSTTS-TVLPFTGLNTP-----------LAV---AVDSDRTVYVADRGNDRVV  248 (260)
T ss_dssp             TTTTEEEEECTTCSCC-EECCCCSCCCE-----------EEE---EECTTCCEEEEEGGGTEEE
T ss_pred             cCCCEEEEEeCCCCeE-EEEccCCCCCe-----------EEE---EEeCCCCEEEEECCCCEEE
Confidence            7888888887654332 2221 111223           677   9999998877766666665

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.81  E-value=6e-07  Score=79.56  Aligned_cols=71  Identities=11%  Similarity=0.091  Sum_probs=57.0

Q ss_pred             eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEE-EEEeCCCcEEEEECCC
Q psy10942        415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI-VSTGADGLLKLWSIKT  485 (537)
Q Consensus       415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~v~vwd~~~  485 (537)
                      .-.+++.++|++.++....+.|.+||...++.+..+.......++++|.|+++.| ++.+.+|.|...++..
T Consensus       228 pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             ceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            4568899999988888788999999988888777777666778999999998755 5566678788777643

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.81  E-value=1.1e-06  Score=76.58  Aligned_cols=118  Identities=19%  Similarity=0.257  Sum_probs=80.7

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      +......+++.++++.+++....+.|++||.. + +.+..+.            .++                  ...  
T Consensus       155 ~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G-~~~~~~g------------~~g------------------~~~--  200 (279)
T d1q7fa_         155 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-G-QYLRQIG------------GEG------------------ITN--  200 (279)
T ss_dssp             TCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-C-CEEEEES------------CTT------------------TSC--
T ss_pred             cccccceeeeccceeEEeeeccccceeeeecC-C-ceeeeec------------ccc------------------ccc--
Confidence            34567788899998888888888888888876 2 2222211            111                  000  


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCC
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                                     ....++++++|+++++-.. ++.|.+|+ .+++.+..+...  ......+++.|+|.+ ++++.+
T Consensus       201 ---------------~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l-~V~~~n  263 (279)
T d1q7fa_         201 ---------------YPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSV-VLASKD  263 (279)
T ss_dssp             ---------------SEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEE-EEEETT
T ss_pred             ---------------CCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcE-EEEeCC
Confidence                           4567889999997776543 45699998 457777776533  235789999999865 455678


Q ss_pred             CcEEEEECCCCe
Q psy10942        476 GLLKLWSIKTST  487 (537)
Q Consensus       476 g~v~vwd~~~~~  487 (537)
                      +.|++|......
T Consensus       264 ~~v~~fr~~~~~  275 (279)
T d1q7fa_         264 YRLYIYRYVQLA  275 (279)
T ss_dssp             TEEEEEECSCCC
T ss_pred             CeEEEEEeeeec
Confidence            999999987653

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.74  E-value=1.6e-06  Score=76.69  Aligned_cols=223  Identities=9%  Similarity=0.057  Sum_probs=128.5

Q ss_pred             CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCE-----E
Q psy10942        294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQ-----I  368 (537)
Q Consensus       294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-----l  368 (537)
                      +++|..||..++...... ..........-..++|.++++.++++...+.+..++.....  ...+....++..     =
T Consensus        45 ~g~I~r~d~~~~~~~~~~-~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~--~~~~~~~~~g~~~~~pnd  121 (314)
T d1pjxa_          45 AGEILRIDLKTGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTF--EEIAKKDSEGRRMQGCND  121 (314)
T ss_dssp             CCEEEEECTTTCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCE--EECCSBCTTSCBCBCCCE
T ss_pred             CCEEEEEECCCCcEEEEE-CCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcE--EEEEeccccccccCCCcE
Confidence            467888888776543211 11111222345789999999988888777778888876322  111111111111     1


Q ss_pred             EEEcCCCcEEEEECCCCee----eeeeccCCcceEEEEEecCCCceEE----eeeeEEEEcCCCC-----EEEEEeCCCc
Q psy10942        369 VSTGADGLLKLWSIKTSTC----VSTFDKHALKIWTLAITKDENQIIT----GGVWFVNFSPLDR-----ILISSSGDAT  435 (537)
Q Consensus       369 ~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~----~~i~~~~~s~~~~-----~l~~~~~dg~  435 (537)
                      +....+|.+.+=|......    ..........++  .+.+++.....    ...+.++|+|++.     +.++-+..+.
T Consensus       122 l~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~--~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~  199 (314)
T d1pjxa_         122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIY--CFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK  199 (314)
T ss_dssp             EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEE--EECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred             EEECCCCCEEEecCccCcccccccceeccCCceEE--EEeecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccc
Confidence            2344556666655432110    001111111222  23444433221    1245788988764     4444456788


Q ss_pred             EEEEECCCceee------eEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCC
Q psy10942        436 IKLWCLTDYVCL------KSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDH  508 (537)
Q Consensus       436 i~i~d~~~~~~~------~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~  508 (537)
                      |..|++.....+      ..+.+ +......+++..+|++.++....+.|.+||.+.++.+..+..+....         
T Consensus       200 i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~---------  270 (314)
T d1pjxa_         200 LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKP---------  270 (314)
T ss_dssp             EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCE---------
T ss_pred             eEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCE---------
Confidence            988887542211      12222 22335689999999988888888999999998887777666555555         


Q ss_pred             ccccccceeeecCCCEEE-EEeCCCCEE
Q psy10942        509 KGFGLPRQLCSRNSDCEY-RGGWSPQVV  535 (537)
Q Consensus       509 ~~~~~~~~~~s~~~~~l~-s~~~dg~i~  535 (537)
                        +++   +|.||++.|+ +.+.+|.|.
T Consensus       271 --t~~---afg~d~~~lyVt~~~~g~i~  293 (314)
T d1pjxa_         271 --SNL---HFKPQTKTIFVTEHENNAVW  293 (314)
T ss_dssp             --EEE---EECTTSSEEEEEETTTTEEE
T ss_pred             --EEE---EEeCCCCEEEEEECCCCcEE
Confidence              778   9999998664 455566654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.73  E-value=2.1e-06  Score=76.27  Aligned_cols=246  Identities=11%  Similarity=0.048  Sum_probs=135.6

Q ss_pred             ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942         98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD  177 (537)
Q Consensus        98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~  177 (537)
                      .+..++|.++|++.++-...+.|..|+.++           ......+.........+++. ++++.+++...+....+.
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g-----------~~~~~~~~~~~~~p~gla~~-~dG~l~va~~~~~~~~~~  108 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPFVSHKANPAAIKIH-KDGRLFVCYLGDFKSTGG  108 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEEECSSSSEEEEEEC-TTSCEEEEECTTSSSCCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCC-----------CeEEEEEeCCCCCeeEEEEC-CCCCEEEEecCCCcccee
Confidence            356899999999777766788898888877           44444444444557789998 666655443322211111


Q ss_pred             ccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecc
Q psy10942        178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEEL  256 (537)
Q Consensus       178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~i  256 (537)
                      +                 ...+.       ...... +.  ....-  ......+   ++.++|++.++........   
T Consensus       109 i-----------------~~~~~-------~~~~~~~~~--~~~~~--~~~~nd~---~~d~~G~l~vtd~~~~~~~---  154 (319)
T d2dg1a1         109 I-----------------FAATE-------NGDNLQDII--EDLST--AYCIDDM---VFDSKGGFYFTDFRGYSTN---  154 (319)
T ss_dssp             E-----------------EEECT-------TSCSCEEEE--CSSSS--CCCEEEE---EECTTSCEEEEECCCBTTB---
T ss_pred             E-----------------EEEcC-------CCceeeeec--cCCCc--ccCCcce---eEEeccceeeccccccccc---
Confidence            2                 11111       111111 11  00011  2345566   7788887655432211110   


Q ss_pred             ccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE
Q psy10942        257 EKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA  336 (537)
Q Consensus       257 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  336 (537)
                          .                                .+.+..++...... ..     +...-...+.++|+|+++.|+
T Consensus       155 ----~--------------------------------~g~v~~~~~dg~~~-~~-----~~~~~~~pnGia~s~dg~~ly  192 (319)
T d2dg1a1         155 ----P--------------------------------LGGVYYVSPDFRTV-TP-----IIQNISVANGIALSTDEKVLW  192 (319)
T ss_dssp             ----C--------------------------------CEEEEEECTTSCCE-EE-----EEEEESSEEEEEECTTSSEEE
T ss_pred             ----C--------------------------------cceeEEEeccccee-EE-----EeeccceeeeeeeccccceEE
Confidence                0                                01233333332211 00     011122357899999998765


Q ss_pred             EE-eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942        337 SG-SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV  415 (537)
Q Consensus       337 ~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i  415 (537)
                      .+ +..+.|+.|++.............                        .........                  ..
T Consensus       193 vad~~~~~I~~~d~~~~g~~~~~~~~~------------------------~~~~~~~~~------------------~P  230 (319)
T d2dg1a1         193 VTETTANRLHRIALEDDGVTIQPFGAT------------------------IPYYFTGHE------------------GP  230 (319)
T ss_dssp             EEEGGGTEEEEEEECTTSSSEEEEEEE------------------------EEEECCSSS------------------EE
T ss_pred             EecccCCceEEEEEcCCCceeccccce------------------------eeeccCCcc------------------ce
Confidence            55 556788888876332222111100                        000000000                  34


Q ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec------CCcceEEEEEecCCCEEEEEeC
Q psy10942        416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG------HDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                      ..++++++|++.++...++.|.+||- .++.+.++..      +...+++++|.+++..+++...
T Consensus       231 dGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         231 DSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             eeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            56899999998888888999999995 6888877753      3345789999998877766554

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.61  E-value=3e-05  Score=68.58  Aligned_cols=223  Identities=8%  Similarity=-0.018  Sum_probs=122.5

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC--CcEEEEEccCCceeeEEEEecCC
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD--KTVKVWSTTGGLKLLNVLRGHKK  364 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~  364 (537)
                      ++++-...+.|..|+.+++....     ...........+++++||+++++...+  ....++.+......+.....+..
T Consensus        53 Ly~~D~~~g~I~ri~p~g~~~~~-----~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  127 (319)
T d2dg1a1          53 LFLLDVFEGNIFKINPETKEIKR-----PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS  127 (319)
T ss_dssp             EEEEETTTCEEEEECTTTCCEEE-----EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred             EEEEECCCCEEEEEECCCCeEEE-----EEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCC
Confidence            44555567788888887765322     122344567899999999988775432  23334433322222222222111


Q ss_pred             -CC--EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE--E---eeeeEEEEcCCCCEEEEE-eCCCc
Q psy10942        365 -GT--QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII--T---GGVWFVNFSPLDRILISS-SGDAT  435 (537)
Q Consensus       365 -~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~---~~i~~~~~s~~~~~l~~~-~~dg~  435 (537)
                       ..  .-+....+|.+.+=|.......     ....  -..+.+++..+.  .   ...+.++|+|+++.|..+ +..+.
T Consensus       128 ~~~~~nd~~~d~~G~l~vtd~~~~~~~-----~~g~--v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~  200 (319)
T d2dg1a1         128 TAYCIDDMVFDSKGGFYFTDFRGYSTN-----PLGG--VYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR  200 (319)
T ss_dssp             SCCCEEEEEECTTSCEEEEECCCBTTB-----CCEE--EEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             cccCCcceeEEeccceeeccccccccc-----Ccce--eEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCc
Confidence             11  1233455666555554321100     0000  111223332211  1   135679999999876555 45789


Q ss_pred             EEEEECCCc-eeeeE-------eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCC
Q psy10942        436 IKLWCLTDY-VCLKS-------LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSEND  507 (537)
Q Consensus       436 i~i~d~~~~-~~~~~-------~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~  507 (537)
                      |..|++... .....       ..........+++.++|++.++....+.|.++|. +|+.+..+.......     ...
T Consensus       201 I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~-----~~~  274 (319)
T d2dg1a1         201 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE-----GHM  274 (319)
T ss_dssp             EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG-----TCS
T ss_pred             eEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCC-----CcC
Confidence            999987531 11111       1111223568999999998888888999999995 788888775432211     000


Q ss_pred             CccccccceeeecCCCEEEEEeC
Q psy10942        508 HKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       508 ~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      ...+++   +|.+++..+++...
T Consensus       275 ~~~~~~---~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         275 LRSTHP---QFIPGTNQLIICSN  294 (319)
T ss_dssp             CBCCEE---EECTTSCEEEEEEE
T ss_pred             ceeeeE---EEeCCCCEEEEEcC
Confidence            011666   99998887776543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.55  E-value=3.5e-06  Score=72.37  Aligned_cols=183  Identities=11%  Similarity=-0.009  Sum_probs=106.7

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEE---------EEecCCCCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942        321 KDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNV---------LRGHKKGTQIVSTGADGLLKLWSIKTSTCVST  390 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~---------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  390 (537)
                      ..-.+++++++|+..++.. ..+.+..++..........         +...+++..+++....+.+++++-.+...+..
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~   93 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP   93 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeee
Confidence            3458999999999777654 4466776665532222211         11222344444444444444433333322222


Q ss_pred             eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE
Q psy10942        391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV  470 (537)
Q Consensus       391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  470 (537)
                      .....                  ....++++++++++++-..+..+..++...................+++++++++++
T Consensus        94 ~~~~~------------------~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v  155 (260)
T d1rwia_          94 FDGLN------------------YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYV  155 (260)
T ss_dssp             CCSCC------------------SEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEE
T ss_pred             eeeee------------------ecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEee
Confidence            11111                  567889999999888776677777777655332222222234467899999999888


Q ss_pred             EEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942        471 STGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV  535 (537)
Q Consensus       471 s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~  535 (537)
                      +...++.|..++.+...............           ..+   ++.++|+++++....+.|.
T Consensus       156 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~p-----------~gi---~~d~~g~l~vsd~~~~~i~  206 (260)
T d1rwia_         156 TDTDNNRVVKLEAESNNQVVLPFTDITAP-----------WGI---AVDEAGTVYVTEHNTNQVV  206 (260)
T ss_dssp             EEGGGTEEEEECTTTCCEEECCCSSCCSE-----------EEE---EECTTCCEEEEETTTTEEE
T ss_pred             eccccccccccccccceeeeeeccccCCC-----------ccc---eeeeeeeeeeeecCCCEEE
Confidence            88888899999976544332222222333           667   9999998877766666654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.42  E-value=0.00024  Score=61.72  Aligned_cols=207  Identities=10%  Similarity=-0.029  Sum_probs=119.5

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC--C
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--G  365 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~  365 (537)
                      ..+--..+.|..||..+++...       ......+.++++.++|+++++ +.+ .+..+|.. ..+..........  .
T Consensus        33 ~wvDi~~~~I~r~d~~~g~~~~-------~~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~-tg~~~~l~~~~~~~~~  102 (295)
T d2ghsa1          33 WWFNILERELHELHLASGRKTV-------HALPFMGSALAKISDSKQLIA-SDD-GLFLRDTA-TGVLTLHAELESDLPG  102 (295)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEE-------EECSSCEEEEEEEETTEEEEE-ETT-EEEEEETT-TCCEEEEECSSTTCTT
T ss_pred             EEEECCCCEEEEEECCCCeEEE-------EECCCCcEEEEEecCCCEEEE-EeC-ccEEeecc-cceeeEEeeeecCCCc
Confidence            3344456789999988876421       122456789999999876665 454 48889987 3332222111111  1


Q ss_pred             CE--EEEEcCCCcEEEEECCCC-----eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEE
Q psy10942        366 TQ--IVSTGADGLLKLWSIKTS-----TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIK  437 (537)
Q Consensus       366 ~~--l~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~  437 (537)
                      ..  -+....+|.+.+-+....     ..+..+.  ...+..+.-.       ....+.++|+++++.+... +..+.|.
T Consensus       103 ~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~--~g~~~~~~~~-------~~~~Ng~~~s~d~~~l~~~dt~~~~I~  173 (295)
T d2ghsa1         103 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-------ISIPNSICFSPDGTTGYFVDTKVNRLM  173 (295)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-------ESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred             ccceeeEECCCCCEEEEeccccccccceeEeeec--CCcEEEEeec-------cCCcceeeecCCCceEEEeecccceee
Confidence            11  122333444433322110     0011110  1111111100       0135678999999866555 4567888


Q ss_pred             EEECCC------cee--eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCc
Q psy10942        438 LWCLTD------YVC--LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHK  509 (537)
Q Consensus       438 i~d~~~------~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~  509 (537)
                      .|++..      ++.  ...+.+..+....+++..+|++.++.-..+.|..||. +|+.+..+......+          
T Consensus       174 ~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~----------  242 (295)
T d2ghsa1         174 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQT----------  242 (295)
T ss_dssp             EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBE----------
T ss_pred             EeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCce----------
Confidence            888642      111  1122234455788999999998888777889999995 788888887665666          


Q ss_pred             cccccceeee-cCCCEEEEE
Q psy10942        510 GFGLPRQLCS-RNSDCEYRG  528 (537)
Q Consensus       510 ~~~~~~~~~s-~~~~~l~s~  528 (537)
                       +++   +|- ||.+.|+..
T Consensus       243 -T~~---~FGG~d~~~LyvT  258 (295)
T d2ghsa1         243 -TCP---AFIGPDASRLLVT  258 (295)
T ss_dssp             -EEE---EEESTTSCEEEEE
T ss_pred             -EEE---EEeCCCCCEEEEE
Confidence             888   995 787777644

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.9e-05  Score=70.95  Aligned_cols=108  Identities=6%  Similarity=-0.001  Sum_probs=65.4

Q ss_pred             eeeeeeeccCCcceEEEe---------cCcceEEEEEcCccceeeeeccc---cccceeeeEeecCccccccCCcEEEEE
Q psy10942          5 VTCFDVIPQITSEFSVHC---------GRDKVLFTWDLSSRKQLRSYPAY---ESLETCAVFHLSDETESKSGGKTFVLA   72 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~---------~~~g~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (537)
                      +....||  ||+++++..         +..+.+.++|+++++.....+..   ..+...  .++|        +++.++-
T Consensus        63 ~~~~~~S--pD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~--~wSP--------DG~~iaf  130 (465)
T d1xfda1          63 AIRYEIS--PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYA--GWGP--------KGQQLIF  130 (465)
T ss_dssp             CSEEEEC--TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBC--CBCS--------STTCEEE
T ss_pred             cceeEEC--CCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCcccccee--eecc--------CCceEEE
Confidence            3445677  899887765         33578899999998765433321   222334  5678        4444444


Q ss_pred             eCccceEEeeeccceehhhhcCCC-------------------cceEEEEEeccccEEEEEeCC-ceEEEEec
Q psy10942         73 GGEKSLLHYYETSAVKELYQHGLS-------------------SPLVRIVRSSVKRMYAVVTAD-HNISLYRL  125 (537)
Q Consensus        73 ~~~~~~i~~wd~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~la~~~~d-~~i~iwd~  125 (537)
                      .. ++.|.+.+..++..++.....                   +.-.++.|||||++||....| ..+..+.+
T Consensus       131 v~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~  202 (465)
T d1xfda1         131 IF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL  202 (465)
T ss_dssp             EE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred             Ee-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeec
Confidence            43 556888887766554333211                   112578899999999987643 33444443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.07  E-value=2.5e-05  Score=67.66  Aligned_cols=89  Identities=8%  Similarity=-0.082  Sum_probs=56.1

Q ss_pred             EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC-C-----ceEEEEecccccCcccccccccce
Q psy10942         68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA-D-----HNISLYRLNSETGLEERPNKILKF  141 (537)
Q Consensus        68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~  141 (537)
                      +.++-.+ ++.|.+.|+.+++...-....+.+...+|||||++||.... +     ..|.+++..++           +.
T Consensus        13 ~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g-----------~~   80 (281)
T d1k32a2          13 DRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG-----------EI   80 (281)
T ss_dssp             TEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT-----------EE
T ss_pred             CEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC-----------ce
Confidence            3444333 56688889998876655556678899999999999987643 1     23666676662           22


Q ss_pred             eEEeecc-------hhhhhhhhcccCCCccEEEeee
Q psy10942        142 RKQFVGF-------SDEILDIALLGEEDSHIVVASN  170 (537)
Q Consensus       142 ~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~  170 (537)
                       +.+..+       ........|+ ++++.|+....
T Consensus        81 -~~lt~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~  114 (281)
T d1k32a2          81 -KRITYFSGKSTGRRMFTDVAGFD-PDGNLIISTDA  114 (281)
T ss_dssp             -EECCCCCEEEETTEECSEEEEEC-TTCCEEEEECT
T ss_pred             -EEeeecCCCccCccccccccccC-CCCCEEEEEEc
Confidence             222211       1234566788 77777765443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.98  E-value=0.00046  Score=66.00  Aligned_cols=169  Identities=8%  Similarity=0.048  Sum_probs=94.9

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccc------cc-----------------------c-CCCeEEEEEcCCCCEE
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK------KG-----------------------H-EKDINCVTVSPNDKLL  335 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~------~~-----------------------~-~~~v~~~~~s~~~~~l  335 (537)
                      ..++.++.+|.+.++|..+++.+........      ..                       + ...-..++++|+..++
T Consensus       328 ~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~  407 (573)
T d1kb0a2         328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV  407 (573)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred             eeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCCccccccccCCCcceE
Confidence            6788888999999999999887543211000      00                       0 0011235778888888


Q ss_pred             EEEeCCCcEEEEEccCCceeeEEEEecCC------CCEEEEE-----cCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942        336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKK------GTQIVST-----GADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT  404 (537)
Q Consensus       336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  404 (537)
                      +....+....++... ..+........+.      ...+..+     ..-|.+.-||+.+++.+-.......        
T Consensus       408 yv~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p--------  478 (573)
T d1kb0a2         408 YLPAQNVPVNLMDDK-KWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP--------  478 (573)
T ss_dssp             EEEEEECCCEEEECT-TCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS--------
T ss_pred             Eeeccccceeeeccc-ccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEeeecCCCC--------
Confidence            877766665555443 1111000000000      0011100     1125788899999988876644321        


Q ss_pred             cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcce-EEEEEecCCC-EEEEEe
Q psy10942        405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV-LRCHFINKGT-QIVSTG  473 (537)
Q Consensus       405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-~~~~~s~~~~-~l~s~~  473 (537)
                                ...-..+-.+.++++|+.||.++.+|.++|+.+.+++...... .-+.|..+|+ |++..+
T Consensus       479 ----------~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~~  539 (573)
T d1kb0a2         479 ----------WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAV  539 (573)
T ss_dssp             ----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             ----------CCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence                      0011122256788889999999999999999999887432211 1145556776 444433

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.95  E-value=0.0035  Score=59.59  Aligned_cols=81  Identities=17%  Similarity=0.041  Sum_probs=53.7

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      |.|.-+|+.+++.+.+...- .+..+-..+-.+.++++++.||.++-+|.++|+.+.+++-.....          ...+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~-~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~----------a~P~  512 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI----------GSPM  512 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCCE
T ss_pred             ccEEEeccCCCceeeEcCCC-CCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCce----------ecce
Confidence            46778888888888776532 222221223346688889999999999999999998886443222          0234


Q ss_pred             cceeeecCCC-EEEEE
Q psy10942        514 PRQLCSRNSD-CEYRG  528 (537)
Q Consensus       514 ~~~~~s~~~~-~l~s~  528 (537)
                         .+..||+ ||++.
T Consensus       513 ---ty~~dGkqYi~v~  525 (571)
T d2ad6a1         513 ---TYSFKGKQYIGSM  525 (571)
T ss_dssp             ---EEEETTEEEEEEE
T ss_pred             ---EEEECCEEEEEEE
Confidence               7777887 45443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.94  E-value=0.0021  Score=61.14  Aligned_cols=82  Identities=7%  Similarity=0.024  Sum_probs=56.9

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      |.|.-+|+.+++.+.+... ..+..+-..+-.+.++++++.||.++-+|.++|+.+..++......          ...+
T Consensus       438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~----------~~P~  506 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIV----------AAPM  506 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCCE
T ss_pred             cceEEEeCCCCeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCcc----------ccCE
Confidence            6788899999998887763 2233322334456788899999999999999999998887544322          0223


Q ss_pred             cceeeecCCC-EEEEEe
Q psy10942        514 PRQLCSRNSD-CEYRGG  529 (537)
Q Consensus       514 ~~~~~s~~~~-~l~s~~  529 (537)
                         .+..||+ +|++..
T Consensus       507 ---ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         507 ---TFELAGRQYVAIMA  520 (560)
T ss_dssp             ---EEEETTEEEEEEEE
T ss_pred             ---EEEECCEEEEEEEe
Confidence               6777886 555443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.86  E-value=0.0061  Score=58.15  Aligned_cols=80  Identities=15%  Similarity=0.082  Sum_probs=55.4

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL  513 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  513 (537)
                      |.|.-||+.+++.+.... +..+..+-..+..+.+++.|+.||.++.+|.++|+.+.+++......          ..-+
T Consensus       453 G~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~----------a~P~  521 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI----------GYPM  521 (596)
T ss_dssp             EEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCCE
T ss_pred             ceEEEEeCCCCceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcc----------cCCe
Confidence            568888888888877655 22333333334467788889999999999999999998886543322          0234


Q ss_pred             cceeeecCCC-EEEE
Q psy10942        514 PRQLCSRNSD-CEYR  527 (537)
Q Consensus       514 ~~~~~s~~~~-~l~s  527 (537)
                         .+..||+ ||+.
T Consensus       522 ---tY~~dGkQYvav  533 (596)
T d1w6sa_         522 ---TYTHKGTQYVAI  533 (596)
T ss_dssp             ---EEEETTEEEEEE
T ss_pred             ---EEEECCEEEEEE
Confidence               7778887 4544

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.85  E-value=0.00053  Score=58.84  Aligned_cols=96  Identities=8%  Similarity=-0.078  Sum_probs=59.7

Q ss_pred             eeeeccCC--cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEE-EeCcc-----ceE
Q psy10942          8 FDVIPQIT--SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVL-AGGEK-----SLL   79 (537)
Q Consensus         8 ~~~~~~~~--~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~i   79 (537)
                      +..+  ||  |+.++-.+. |.|.+.|+++++..+...........  .++|        +++.|+ +...+     ..|
T Consensus         4 ~~~s--Pdi~G~~v~f~~~-~dl~~~d~~~g~~~~Lt~~~~~~~~p--~~SP--------DG~~iaf~~~~~~~~~~~~i   70 (281)
T d1k32a2           4 LLLN--PDIHGDRIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNA--RFFP--------DGRKIAIRVMRGSSLNTADL   70 (281)
T ss_dssp             CCEE--EEEETTEEEEEET-TEEEEEETTTCCEEEEECSSSEEEEE--EECT--------TSSEEEEEEEESTTCCEEEE
T ss_pred             cccC--CCCCCCEEEEEeC-CcEEEEECCCCCEEEEecCCCcccCE--EECC--------CCCEEEEEEeeCCCCCceEE
Confidence            3456  56  877776644 45888899988876543333344444  6788        445444 43222     347


Q ss_pred             EeeeccceehhhhcCCC-------cceEEEEEeccccEEEEEeC
Q psy10942         80 HYYETSAVKELYQHGLS-------SPLVRIVRSSVKRMYAVVTA  116 (537)
Q Consensus        80 ~~wd~~~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~  116 (537)
                      .+++..+++........       ......+|+|||+.|+....
T Consensus        71 ~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  114 (281)
T d1k32a2          71 YFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA  114 (281)
T ss_dssp             EEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred             EEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence            77788777654332222       25678899999999987643

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.69  E-value=0.018  Score=54.82  Aligned_cols=82  Identities=9%  Similarity=0.056  Sum_probs=58.7

Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG  512 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  512 (537)
                      .|.|.-+|+.+++.+.+.+.+. ++..-..+..+.++++++.||.++-+|.++|+.+..++......          ..-
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~----------~~P  533 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV----------SPP  533 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCC
T ss_pred             CCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCcc----------ccC
Confidence            3678889999999988877442 33322344567788899999999999999999998887544322          023


Q ss_pred             ccceeeecCCC-EEEEE
Q psy10942        513 LPRQLCSRNSD-CEYRG  528 (537)
Q Consensus       513 ~~~~~~s~~~~-~l~s~  528 (537)
                      +   .+..||+ +++..
T Consensus       534 ~---ty~~~G~qYv~i~  547 (582)
T d1flga_         534 I---TWEQDGEQYLGVT  547 (582)
T ss_dssp             E---EEEETTEEEEEEE
T ss_pred             E---EEEECCEEEEEEE
Confidence            4   7888986 45443

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.63  E-value=0.015  Score=49.85  Aligned_cols=173  Identities=15%  Similarity=0.050  Sum_probs=100.0

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEccCCceeeEEEE--
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL----DKTVKVWSTTGGLKLLNVLR--  360 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~--  360 (537)
                      .++.++.+ .+..+|..+++..... ..........++.+.+.|+|++.++...    .+.-.+|.+. ..+......  
T Consensus        71 ~l~va~~~-gl~~~d~~tg~~~~l~-~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~-~g~~~~~~~~~  147 (295)
T d2ghsa1          71 KQLIASDD-GLFLRDTATGVLTLHA-ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADI  147 (295)
T ss_dssp             EEEEEETT-EEEEEETTTCCEEEEE-CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEE
T ss_pred             CEEEEEeC-ccEEeecccceeeEEe-eeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec-CCcEEEEeecc
Confidence            34445554 5889999887643211 1111112335789999999987776532    2344566665 333333222  


Q ss_pred             -------ecCCCC-EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942        361 -------GHKKGT-QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG  432 (537)
Q Consensus       361 -------~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  432 (537)
                             ..+++. .+++-+..+.|..+++........     .... ......+.   .+....++++.+|++.++.-.
T Consensus       148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~-----~~~~-~~~~~~~~---~g~pdG~~vD~~GnlWva~~~  218 (295)
T d2ghsa1         148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT-----GKAE-VFIDSTGI---KGGMDGSVCDAEGHIWNARWG  218 (295)
T ss_dssp             SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS-----SCCE-EEEECTTS---SSEEEEEEECTTSCEEEEEET
T ss_pred             CCcceeeecCCCceEEEeecccceeeEeeecccccccc-----cceE-EEeccCcc---cccccceEEcCCCCEEeeeeC
Confidence                   223344 345555667777776642211000     0000 00000000   015677899999998888778


Q ss_pred             CCcEEEEECCCceeeeEeecCCcceEEEEEe-cCCCEEEEE
Q psy10942        433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFI-NKGTQIVST  472 (537)
Q Consensus       433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~  472 (537)
                      .+.|..|| ..++.+..+.-....+++++|- +|.+.|+..
T Consensus       219 ~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         219 EGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             TTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             CCceEEec-CCCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            88999999 5688888887666679999996 566666543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.56  E-value=0.0073  Score=57.42  Aligned_cols=62  Identities=15%  Similarity=0.087  Sum_probs=46.0

Q ss_pred             CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942        434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~  496 (537)
                      |.+.-||+.+++.+.+.+.. .+...-..+-.+.++++++.||.++.+|.++|+.+..++...
T Consensus       457 G~l~AiD~~tGk~~W~~~~~-~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~  518 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT  518 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             ccEEEeCCCCCceEeeecCC-CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCC
Confidence            35777888888888877643 222222234467788899999999999999999998887543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.50  E-value=0.043  Score=51.85  Aligned_cols=166  Identities=12%  Similarity=0.001  Sum_probs=90.4

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccc--------------------------------cccCCC--eEEEEEcCC
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------------------------------KGHEKD--INCVTVSPN  331 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--------------------------------~~~~~~--v~~~~~s~~  331 (537)
                      ..++.++.+|.+.++|..+++.+........                                ....+.  -...+++|+
T Consensus       317 ~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~  396 (571)
T d2ad6a1         317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE  396 (571)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred             cceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceECCC
Confidence            5677888999999999998876532100000                                000000  013567787


Q ss_pred             CCEEEEEeCCCcEEEEEccCCc--------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEE
Q psy10942        332 DKLLASGSLDKTVKVWSTTGGL--------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAI  403 (537)
Q Consensus       332 ~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  403 (537)
                      ..+++....+............        ...........    ......|.+.-+|+.+++.+.+.......      
T Consensus       397 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~l~AiD~~TG~~~W~~~~~~~~------  466 (571)
T d2ad6a1         397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNG----PTKKEMGQIRAFDLTTGKAKWTKWEKFAA------  466 (571)
T ss_dssp             TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTS----TTSCCCEEEEEECTTTCCEEEEEEESSCC------
T ss_pred             CceEEEeccccccccccccccccCCccccccceeeccccCC----cccCCcccEEEeccCCCceeeEcCCCCCC------
Confidence            7777777655433332211000        00000000000    00122367889999999887765432210      


Q ss_pred             ecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCC-EEEEEe
Q psy10942        404 TKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGT-QIVSTG  473 (537)
Q Consensus       404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~-~l~s~~  473 (537)
                                  .+-.++-.+.++++|+.||.++.+|.++|+.+.+++-.... -.-+.|..||+ |+++..
T Consensus       467 ------------~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v~~  526 (571)
T d2ad6a1         467 ------------WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMY  526 (571)
T ss_dssp             ------------CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             ------------CcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEEEe
Confidence                        00011123557778999999999999999999988743221 12255666776 554443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.50  E-value=0.019  Score=47.74  Aligned_cols=229  Identities=12%  Similarity=0.097  Sum_probs=132.9

Q ss_pred             cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942        236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH  315 (537)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  315 (537)
                      .+|..+.+|.-+ ...+.  +++++..+......+..++.-+.+-..   +.|+..+ +..|+-|+++....+.+.+.+.
T Consensus        70 MhP~~~IiALra-g~~LQ--iFnletK~klks~~~~e~VvfWkWis~---~~L~lVT-~taVYHW~~~g~s~P~k~fdR~  142 (327)
T d1utca2          70 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISL---NTVALVT-DNAVYHWSMEGESQPVKMFDRH  142 (327)
T ss_dssp             ECSSSSEEEEEE-TTEEE--EEETTTTEEEEEEECSSCCCEEEESSS---SEEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred             cCCCCcEEEEec-CCeEE--EEehhHhhhhceEEcCCCcEEEEecCC---CEEEEEc-CCceEEEcccCCCCchhhhhhc
Confidence            467776666544 45788  999988543333333333333333332   2333333 4689999997655544443433


Q ss_pred             ccccCCCeEEEEEcCCCCEEEEEe---C----CCcEEEEEccCCceeeEEEEecCC------------C-CEEEEE---c
Q psy10942        316 KKGHEKDINCVTVSPNDKLLASGS---L----DKTVKVWSTTGGLKLLNVLRGHKK------------G-TQIVST---G  372 (537)
Q Consensus       316 ~~~~~~~v~~~~~s~~~~~l~~~~---~----d~~i~i~d~~~~~~~~~~~~~~~~------------~-~~l~~~---~  372 (537)
                      -.-....|..-..+++.++++..+   .    .|.+.+|..+  .+.-+.+++|..            . ..++-+   .
T Consensus       143 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~  220 (327)
T d1utca2         143 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  220 (327)
T ss_dssp             GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred             ccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEec--cCcCccccceeeeeEEEEcCCCCCCceEEEEEECCC
Confidence            333456788888899999877643   2    3667888887  333444444421            1 222222   2


Q ss_pred             CCCcEEEEECCCCee-eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942        373 ADGLLKLWSIKTSTC-VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE  451 (537)
Q Consensus       373 ~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  451 (537)
                      ..+++++.++..... -..+   ......+.+.|+..-   .-..++..|+....+..-+.-|.|++||+.++.++..-+
T Consensus       221 ~~~kLhIiEig~~~~g~~~f---~kk~vdi~fppea~~---DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nR  294 (327)
T d1utca2         221 AGGKLHIIEVGTPPTGNQPF---PKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR  294 (327)
T ss_dssp             TEEEEEEEECSCCCTTCCCC---CCEEEECCCCTTCTT---CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCcEEEEEEcCCCccCCCCC---cceeEEEECCccccC---CcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEee
Confidence            236777777765311 1111   111223334443211   135667888888888889999999999999999988877


Q ss_pred             cCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942        452 GHDASVLRCHFINKGTQIVSTGADGLLK  479 (537)
Q Consensus       452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~  479 (537)
                      -..+.|...+-..+..=++....+|.|.
T Consensus       295 Is~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         295 ISGETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             CCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             cCCCceEEeccCCCCceEEEECCCCeEE
Confidence            6666666555555544455555666553

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.40  E-value=0.019  Score=50.65  Aligned_cols=180  Identities=9%  Similarity=0.057  Sum_probs=102.8

Q ss_pred             eEEEEEeCCCeEEEEECCCCceeeeeecccccc---------------------------------c-CCCe--EEEEEc
Q psy10942        286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG---------------------------------H-EKDI--NCVTVS  329 (537)
Q Consensus       286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---------------------------------~-~~~v--~~~~~s  329 (537)
                      -.|.+|+..|.++++-+.+.+.+..+.......                                 + .+..  ..+.+.
T Consensus        14 y~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~T   93 (459)
T d1fwxa2          14 YGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFT   93 (459)
T ss_dssp             EEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEE
T ss_pred             EEEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCccccc
Confidence            357788999999999998887765542211100                                 0 0011  244444


Q ss_pred             C---CCCEEEEEe-CCCcEEEEEccCCceeeEEEEec-------------CCCCEEEEEcCCC-----------------
Q psy10942        330 P---NDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGH-------------KKGTQIVSTGADG-----------------  375 (537)
Q Consensus       330 ~---~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~-------------~~~~~l~~~~~d~-----------------  375 (537)
                      .   ||++|++.. .+++|-+.|+. ..+..+.+...             ++..+++..+.+.                 
T Consensus        94 dGtyDGrylFVNDkan~RVAvIdl~-~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~  172 (459)
T d1fwxa2          94 EGKYDGRFLFMNDKANTRVARVRCD-VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV  172 (459)
T ss_dssp             TTEEEEEEEEEEETTTTEEEEEETT-TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EE
T ss_pred             CCccceeEEEEEcCCCceEEEEECc-ceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcc
Confidence            3   788888766 57789999998 55554433221             2244555554422                 


Q ss_pred             -cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC--------------------
Q psy10942        376 -LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA--------------------  434 (537)
Q Consensus       376 -~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------------  434 (537)
                       .+...|..+.+....+....                  ....+.++|+|+++++.+.+.                    
T Consensus       173 ~~~t~ID~~tm~V~~QV~V~g------------------~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~  234 (459)
T d1fwxa2         173 NVFTAVDADKWEVAWQVLVSG------------------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVF  234 (459)
T ss_dssp             EEEEEEETTTTEEEEEEEESS------------------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEE
T ss_pred             eEEEEEecCCceEEEEeeeCC------------------ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEe
Confidence             24455666555544432221                  344567777777777765431                    


Q ss_pred             ------------------cEEEEECCCc---eeeeEeecCCcceEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10942        435 ------------------TIKLWCLTDY---VCLKSLEGHDASVLRCHFINKGTQIVSTGA-DGLLKLWSIKT  485 (537)
Q Consensus       435 ------------------~i~i~d~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~  485 (537)
                                        .+.+.|..+.   ..+..+.. ......+..+|||+++++++. +.++.|+|++.
T Consensus       235 n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         235 NIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             EHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred             chHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence                              1233333221   11112221 123467899999999987765 88999999863

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.40  E-value=0.018  Score=50.81  Aligned_cols=94  Identities=12%  Similarity=0.107  Sum_probs=59.9

Q ss_pred             CCEEEEEc-CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc--CCCCEEEEEeCC--------
Q psy10942        365 GTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS--PLDRILISSSGD--------  433 (537)
Q Consensus       365 ~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~d--------  433 (537)
                      |++++... .+++|.+.|+++.+..+........                .+..+...  |+..|++.++.+        
T Consensus        99 GrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~----------------~~HG~r~~~~p~T~YV~~~~e~~vP~pndg  162 (459)
T d1fwxa2          99 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAK----------------GIHGLRPQKWPRSNYVFCNGEDETPLVNDG  162 (459)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCC----------------SEEEEEECCSSBCSEEEEEECSCEESSCSS
T ss_pred             eeEEEEEcCCCceEEEEECcceeeeEEEecCCCC----------------CCceeecccCCCeEEEEccCccccccCCCC
Confidence            56665554 5788888898888875544332211                23333332  334455555442        


Q ss_pred             ----------CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC
Q psy10942        434 ----------ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       434 ----------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                                +.+.++|..+.+....+... +....+.++++|+++++.+.+
T Consensus       163 ~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyN  213 (459)
T d1fwxa2         163 TNMEDVANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYN  213 (459)
T ss_dssp             SSTTCGG-EEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESC
T ss_pred             ccccchhhcceEEEEEecCCceEEEEeeeC-CChhccccCCCCCEEEEEecc
Confidence                      23667899888887777643 456789999999999988753

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.01  E-value=0.069  Score=44.35  Aligned_cols=119  Identities=12%  Similarity=0.172  Sum_probs=76.0

Q ss_pred             cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942         23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI  102 (537)
Q Consensus        23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~  102 (537)
                      +....|.|-|+.+...+.+-|    +.+=+.+..|        ..+.++.-+ ...|.++|+++.+.+.....++.|.--
T Consensus        42 ~~~~~VvIidl~n~~~~~Rrp----i~AdsAIMhP--------~~~IiALra-g~~LQiFnletK~klks~~~~e~VvfW  108 (327)
T d1utca2          42 GEQAQVVIIDMNDPSNPIRRP----ISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW  108 (327)
T ss_dssp             TTEEEEEEEETTSTTSCEEEE----CCCSEEEECS--------SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred             CCCceEEEEECCCCCcceecc----cchhhhhcCC--------CCcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEE
Confidence            344578888888776554433    2222225567        445555444 457999999999999999999999888


Q ss_pred             EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh----hhhhhhcccCCCccEEE
Q psy10942        103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD----EILDIALLGEEDSHIVV  167 (537)
Q Consensus       103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~  167 (537)
                      .|-.+. .|+..+. ..|+-|++++.          .++.+.+..|..    .|..-..+ ++.+.+++
T Consensus       109 kWis~~-~L~lVT~-taVYHW~~~g~----------s~P~k~fdR~~~L~~~QIInY~~d-~~~kW~~l  164 (327)
T d1utca2         109 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLL  164 (327)
T ss_dssp             EESSSS-EEEEECS-SEEEEEESSSS----------CCCEEEEECCGGGTTCEEEEEEEC-TTSCEEEE
T ss_pred             EecCCC-EEEEEcC-CceEEEcccCC----------CCchhhhhhcccccCceEEEEEEC-CCCCEEEE
Confidence            886554 4555554 56999999663          344556665543    23444444 45555544

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.96  E-value=0.078  Score=44.18  Aligned_cols=180  Identities=8%  Similarity=-0.054  Sum_probs=94.2

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEe----------cC
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRG----------HK  363 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~----------~~  363 (537)
                      +.|+-.+++............+..+...+.+++|.+..+.++... .++.|+..++.. ......+..          ..
T Consensus        10 ~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g-~~~~~v~~~~~~~p~~iAvD~   88 (263)
T d1npea_          10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG-GEPTTIIRQDLGSPEGIALDH   88 (263)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSS-CCCEEEECTTCCCEEEEEEET
T ss_pred             CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEccc-CCcEEEEEeccccccEEEEec
Confidence            567777776543211110111233344577899998877777654 557788888873 322222221          11


Q ss_pred             -CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEE
Q psy10942        364 -KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLW  439 (537)
Q Consensus       364 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~  439 (537)
                       .+....+-...+.|.+.++........+.....                 .+..++++|...++......   ..|.--
T Consensus        89 ~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~-----------------~p~~l~vdp~~g~ly~t~~~~~~~~I~r~  151 (263)
T d1npea_          89 LGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV-----------------NPRGIVTDPVRGNLYWTDWNRDNPKIETS  151 (263)
T ss_dssp             TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----------------SEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred             cCCeEEEeccCCCEEEEEecCCceEEEEeccccc-----------------CCcEEEEecccCcEEEeecCCCCcEEEEe
Confidence             122223333444555555543322111111111                 45677888877666655432   234444


Q ss_pred             ECCCceeeeEeecCCcceEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEEe
Q psy10942        440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVST-GADGLLKLWSIKTSTCVSTF  492 (537)
Q Consensus       440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~  492 (537)
                      ++............-.....+++.+.++.|+-+ ...+.|...++........+
T Consensus       152 ~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~  205 (263)
T d1npea_         152 HMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL  205 (263)
T ss_dssp             ETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred             cCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEE
Confidence            554433332233233456899999887777655 45678999998654443333

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.69  E-value=0.27  Score=46.42  Aligned_cols=108  Identities=8%  Similarity=0.100  Sum_probs=60.1

Q ss_pred             CcceEEEecCcceEEEEEc-Cccceeeeeccccc-----ccee-----eeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942         15 TSEFSVHCGRDKVLFTWDL-SSRKQLRSYPAYES-----LETC-----AVFHLSDETESKSGGKTFVLAGGEKSLLHYYE   83 (537)
Q Consensus        15 ~~~~l~s~~~~g~v~iwd~-~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd   83 (537)
                      ++.++++.+.++.+..-|. ++|+++=++.....     ..++     ++.+.+.    ......+++.+..|+.|.-.|
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~----~~~~~~~v~~~t~dg~l~Ald  137 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG----DGKTPALILKTQLDGNVAALN  137 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC----CSSSCCEEEEECTTSEEEEEE
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecC----CCCCceEEEEEeCCCCeEeec
Confidence            3444444554566777776 57888876542211     1111     1122332    111334677888899999999


Q ss_pred             ccceehhhhcCCCc-----ceEEEEEeccccEEEEEeC------CceEEEEeccc
Q psy10942         84 TSAVKELYQHGLSS-----PLVRIVRSSVKRMYAVVTA------DHNISLYRLNS  127 (537)
Q Consensus        84 ~~~~~~~~~~~~~~-----~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~  127 (537)
                      .++|+.+......+     .+++--.--++ .++++..      .|.|+-+|+.+
T Consensus       138 a~tG~~~w~~~~~d~~~~~~~t~~P~v~~~-~vivg~~~~e~~~~G~v~A~Da~T  191 (596)
T d1w6sa_         138 AETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKT  191 (596)
T ss_dssp             TTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred             cccCceeccccccccccccccccCCcEECC-eEEEeeccccccccCceEEEECCC
Confidence            99999887764321     12111111133 3444432      47899999999

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.58  E-value=0.018  Score=51.51  Aligned_cols=59  Identities=8%  Similarity=-0.016  Sum_probs=35.0

Q ss_pred             eEEEEcCCCCEEEEEeCC-----------CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeC
Q psy10942        416 WFVNFSPLDRILISSSGD-----------ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGA  474 (537)
Q Consensus       416 ~~~~~s~~~~~l~~~~~d-----------g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~  474 (537)
                      .+.+..+|+++++.|+.+           ..+.+||..+.+-  +..+......=......+||+.|+.|+.
T Consensus       292 ~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         292 HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             CEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            345566888988888743           1478899876542  2222110000112345789999999884

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.49  E-value=0.29  Score=45.84  Aligned_cols=140  Identities=10%  Similarity=0.036  Sum_probs=79.9

Q ss_pred             cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942        376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTDYVCLKSLEGHD  454 (537)
Q Consensus       376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  454 (537)
                      .|.-.|+++++....++.....++........      ....+..... ...++.+..+|.+.++|..+++++...+.-.
T Consensus       271 sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~------~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~  344 (560)
T d1kv9a2         271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQI------TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGK  344 (560)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCE------EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred             eeEEecCCccceeEEEecccccccccccccee------eeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccc
Confidence            45666777777766655433333322211000      1112222111 1356778889999999999988875543110


Q ss_pred             ----------------------------------cc--eEEEEEecCCCEEEEEeCC-----------------------
Q psy10942        455 ----------------------------------AS--VLRCHFINKGTQIVSTGAD-----------------------  475 (537)
Q Consensus       455 ----------------------------------~~--v~~~~~s~~~~~l~s~~~d-----------------------  475 (537)
                                                        +.  -...+++|+..+++....+                       
T Consensus       345 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (560)
T d1kv9a2         345 VTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAG  424 (560)
T ss_dssp             CCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSC
T ss_pred             cccccccChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccC
Confidence                                              00  0145677777766654422                       


Q ss_pred             -------------CcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942        476 -------------GLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV  536 (537)
Q Consensus       476 -------------g~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v  536 (537)
                                   |.+.-||+.+|+.+........ .           .+-   ..+-.+.+++.++.||.++-
T Consensus       425 ~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~-~-----------~gg---~l~TagglVF~G~~dg~l~A  483 (560)
T d1kv9a2         425 FADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-W-----------NGG---TLSTAGNLVFQGTAAGQMHA  483 (560)
T ss_dssp             GGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-C-----------CCC---EEEETTTEEEEECTTSEEEE
T ss_pred             cccccCCCCcccccceEEEeCCCCeEeeeccCCCC-C-----------CCc---eeEECCCEEEEECCCCcEEE
Confidence                         4577889999998877653221 2           222   34556778888888888764

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.2  Score=41.60  Aligned_cols=170  Identities=5%  Similarity=-0.075  Sum_probs=92.8

Q ss_pred             CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc--eeeEEEE-----------
Q psy10942        295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGL--KLLNVLR-----------  360 (537)
Q Consensus       295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~~-----------  360 (537)
                      ..|+..++.+.....      +......+.+++|++..+.|+-.. .++.|.-.++....  .....+.           
T Consensus        10 ~~I~~~~l~~~~~~~------~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glA   83 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTS------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA   83 (266)
T ss_dssp             SSEEEEETTSCCCEE------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred             CeEEEEECCCCccee------eeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEE
Confidence            458888998765321      123345678999999888777664 45566666664211  1111111           


Q ss_pred             ecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CCCcEE
Q psy10942        361 GHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GDATIK  437 (537)
Q Consensus       361 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~  437 (537)
                      ... .+....+-...++|.+.++........+.....                 ....++++|...+|....  ..+.|.
T Consensus        84 vD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~-----------------~P~~l~vd~~~g~ly~~~~~~~~~I~  146 (266)
T d1ijqa1          84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKIK  146 (266)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----------------CEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred             EeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCC-----------------CcceEEEEcccCeEEEeccCCCccee
Confidence            111 123333334445566666554433222222222                 456677777655555543  234566


Q ss_pred             EEECCCceeeeEeecCCcceEEEEEecCCCEEEEE-eCCCcEEEEECCCCe
Q psy10942        438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST-GADGLLKLWSIKTST  487 (537)
Q Consensus       438 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~v~vwd~~~~~  487 (537)
                      -.++............-...+.+++.+.++.|+-+ ...+.|...++....
T Consensus       147 r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~  197 (266)
T d1ijqa1         147 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN  197 (266)
T ss_dssp             EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             EeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCC
Confidence            66665433333333333557899999987777665 456788888886543

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.07  E-value=0.084  Score=46.93  Aligned_cols=107  Identities=14%  Similarity=0.050  Sum_probs=62.9

Q ss_pred             eeeccCCcceEEEecCc-ceEEEEEcCccceee--eeccccccceeeeEeecCccccccCCcEEEEEeCcc------ceE
Q psy10942          9 DVIPQITSEFSVHCGRD-KVLFTWDLSSRKQLR--SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK------SLL   79 (537)
Q Consensus         9 ~~~~~~~~~~l~s~~~~-g~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i   79 (537)
                      ++.  +|+++++.|+.+ ..+.+||..+.+-..  .++....-..+  +.++        ++++++.++..      ..+
T Consensus        82 ~~~--~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~--~~~~--------dG~v~v~GG~~~~~~~~~~v  149 (387)
T d1k3ia3          82 SMD--GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSS--ATMS--------DGRVFTIGGSWSGGVFEKNG  149 (387)
T ss_dssp             EEC--TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEE--EECT--------TSCEEEECCCCCSSSCCCCE
T ss_pred             EEe--cCCcEEEeecCCCcceeEecCccCcccccccccccccccce--eeec--------CCceeeecccccccccccee
Confidence            455  789999988655 579999998765443  22221112222  4455        55677777642      358


Q ss_pred             Eeeeccceeh--hhhcC-------CC------cceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942         80 HYYETSAVKE--LYQHG-------LS------SPLVRIVRSSVKRMYAVVTADHNISLYRLNS  127 (537)
Q Consensus        80 ~~wd~~~~~~--~~~~~-------~~------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~  127 (537)
                      .+||..+.+-  +....       .+      +.-..+...++|+.++.+...+.+.+++..+
T Consensus       150 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~  212 (387)
T d1k3ia3         150 EVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS  212 (387)
T ss_dssp             EEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred             eeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCccc
Confidence            8899876532  11110       00      1122233457888888877777777777766

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.34  E-value=0.081  Score=50.07  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=54.7

Q ss_pred             CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC
Q psy10942        374 DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH  453 (537)
Q Consensus       374 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  453 (537)
                      .|.+.-+|+.+++.+.....+..                  +..-.++-.+.++++|+.||.++.+|.++|+.+.+++-.
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p------------------~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~  526 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLP------------------LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG  526 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSC------------------CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CCeEEEEcCCCCcEEeecCCCCC------------------CccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECC
Confidence            47788899999988877654321                  111112335667888999999999999999999998743


Q ss_pred             Ccc-eEEEEEecCCC-EEEEE
Q psy10942        454 DAS-VLRCHFINKGT-QIVST  472 (537)
Q Consensus       454 ~~~-v~~~~~s~~~~-~l~s~  472 (537)
                      ... -.-+.|..+|+ |++..
T Consensus       527 ~~~~~~P~ty~~~G~qYv~i~  547 (582)
T d1flga_         527 SGIVSPPITWEQDGEQYLGVT  547 (582)
T ss_dssp             SCCCSCCEEEEETTEEEEEEE
T ss_pred             CCccccCEEEEECCEEEEEEE
Confidence            221 11256677886 45443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.75  E-value=1.3  Score=39.47  Aligned_cols=100  Identities=10%  Similarity=-0.037  Sum_probs=57.6

Q ss_pred             eeeeeeeccCCcceEEEe-----cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc----
Q psy10942          5 VTCFDVIPQITSEFSVHC-----GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE----   75 (537)
Q Consensus         5 V~~~~~~~~~~~~~l~s~-----~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   75 (537)
                      +..+.+|  ||+++++-+     ++.-.|++.|+++++.+...-.......+  .+.++       +..++++.-.    
T Consensus       127 ~~~~~~S--pd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~--~W~~D-------~~~~~Y~~~~~~~~  195 (430)
T d1qfma1         127 LRGYAFS--EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCM--AWTHD-------GKGMFYNAYPQQDG  195 (430)
T ss_dssp             EEEEEEC--TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCE--EECTT-------SSEEEEEECCCCSS
T ss_pred             ecceEec--CCCCEEEEEeccccCchheeEEeccCcceecccccccccccce--EEcCC-------CCEEEEEEeccccC
Confidence            3444555  888877743     33467999999999987622111111233  56774       4455555321    


Q ss_pred             -----------cceEEeeeccceeh----hhhcCC-CcceEEEEEeccccEEEEEe
Q psy10942         76 -----------KSLLHYYETSAVKE----LYQHGL-SSPLVRIVRSSVKRMYAVVT  115 (537)
Q Consensus        76 -----------~~~i~~wd~~~~~~----~~~~~~-~~~v~~~~~s~~~~~la~~~  115 (537)
                                 ...|..|.+.+...    +..... ...+..+..++++++++...
T Consensus       196 ~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~  251 (430)
T d1qfma1         196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (430)
T ss_dssp             CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             cccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEe
Confidence                       22477776655432    222221 23577788899999976543

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.29  E-value=2.1  Score=36.55  Aligned_cols=73  Identities=5%  Similarity=-0.143  Sum_probs=45.4

Q ss_pred             eeeEEEEcCCCCEEEEEeC---------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCc
Q psy10942        414 GVWFVNFSPLDRILISSSG---------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGL  477 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~  477 (537)
                      ..+++++..++.++++-..               -+...+|....++...... .-...+.++++||+++|+.+. ..+.
T Consensus       151 ~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~-~l~~pNGI~~s~d~~~lyVa~t~~~~  229 (340)
T d1v04a_         151 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINISPDGKYVYIAELLAHK  229 (340)
T ss_dssp             SEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEE-EESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             CccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcC-CCCccceeEECCCCCEEEEEeCCCCe
Confidence            4677888888887777321               1223344443333322223 234578999999998776654 5678


Q ss_pred             EEEEECCCCe
Q psy10942        478 LKLWSIKTST  487 (537)
Q Consensus       478 v~vwd~~~~~  487 (537)
                      |++|++....
T Consensus       230 i~~y~~~~~~  239 (340)
T d1v04a_         230 IHVYEKHANW  239 (340)
T ss_dssp             EEEEEECTTS
T ss_pred             EEEEEeCCCc
Confidence            9999886543

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.11  E-value=1.5  Score=37.52  Aligned_cols=59  Identities=17%  Similarity=0.042  Sum_probs=37.0

Q ss_pred             eeeEEEEcCCCCEEEEEe-CCCcEEEEECCCceeeeEe--ecCCcceEEEEEec-CCCEEEEE
Q psy10942        414 GVWFVNFSPLDRILISSS-GDATIKLWCLTDYVCLKSL--EGHDASVLRCHFIN-KGTQIVST  472 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~s~-~~~~l~s~  472 (537)
                      ..+.++++||+++|+++. ..+.|+.|++.....+...  ..-.+..-.+.+.+ +|.+.+.+
T Consensus       207 ~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         207 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             ccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            567799999998777665 4678999988753322211  11234456778876 45544444

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.33  E-value=2.4  Score=34.65  Aligned_cols=191  Identities=13%  Similarity=0.032  Sum_probs=99.7

Q ss_pred             EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEec-CCC
Q psy10942        288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGH-KKG  365 (537)
Q Consensus       288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-~~~  365 (537)
                      +.+-..++.|+..++.+.....     ........+.++++..-++.|+.+ ...+.|.+.++... .....+... ...
T Consensus        51 ywsd~~~~~I~~~~l~g~~~~~-----v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~-~~~~l~~~~l~~p  124 (263)
T d1npea_          51 YWTDISEPSIGRASLHGGEPTT-----IIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT-QRRVLFDTGLVNP  124 (263)
T ss_dssp             EEEETTTTEEEEEESSSCCCEE-----EECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSE
T ss_pred             EEEECCCCeEEEEEcccCCcEE-----EEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc-eEEEEecccccCC
Confidence            3344456778777776654321     112223467899998766666544 45678999988732 221111111 111


Q ss_pred             CEEEEEcCCCcEEEEECCCCe-eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q psy10942        366 TQIVSTGADGLLKLWSIKTST-CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTD  443 (537)
Q Consensus       366 ~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~  443 (537)
                      ..++.-...|.+..-+..... .+............+. .+.-     .....+++++.++.|.... ..+.|...++..
T Consensus       125 ~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~-~~~~-----~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g  198 (263)
T d1npea_         125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA-QDNL-----GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ  198 (263)
T ss_dssp             EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE-CTTC-----SCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred             cEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeee-eecc-----cccceEEEeecCcEEEEEeCCCCEEEEEECCC
Confidence            222222233333322221111 1111110000001111 0000     1457899988887776664 567899999876


Q ss_pred             ceeeeEeecCCcceEEEEEecCCCEEE-EEeCCCcEEEEECCCCeeEEEec
Q psy10942        444 YVCLKSLEGHDASVLRCHFINKGTQIV-STGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      ......+.+.. ...++++.  +..|+ +-...+.|...|..+++.+..+.
T Consensus       199 ~~~~~v~~~~~-~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         199 PGRRKVLEGLQ-YPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             EEEEEEEECCC-SEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred             CCeEEEECCCC-CcEEEEEE--CCEEEEEECCCCEEEEEECCCCccceEEC
Confidence            55444444433 34577775  34454 44466889999998898877664

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=91.90  E-value=2.1  Score=33.09  Aligned_cols=35  Identities=14%  Similarity=0.212  Sum_probs=24.3

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeE
Q psy10942        321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN  357 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~  357 (537)
                      -.|.+++.. +.+..++|+......+|-++ +++...
T Consensus       104 vRI~S~~yd-dk~vvF~Gased~~~LYvie-gGklrk  138 (313)
T d2hu7a1         104 MRILSGVDT-GEAVVFTGATEDRVALYALD-GGGLRE  138 (313)
T ss_dssp             BEEEEEEEC-SSCEEEEEECSSCEEEEEEE-TTEEEE
T ss_pred             EEEEEeeec-CceEEEecccCCceEEEEEe-CCceee
Confidence            346666665 55677888888888888887 555443

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.02  E-value=0.62  Score=42.00  Aligned_cols=52  Identities=10%  Similarity=0.061  Sum_probs=37.7

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee--------cCCcceEEEEEecC
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE--------GHDASVLRCHFINK  465 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~s~~  465 (537)
                      ..++|+|.||++++++--..|.|++++..+++......        .-+.....|+|+|+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            57789999999988877567999999877764432211        11345789999985

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.82  E-value=4.3  Score=33.08  Aligned_cols=168  Identities=15%  Similarity=0.022  Sum_probs=87.2

Q ss_pred             CCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942        321 KDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI  398 (537)
Q Consensus       321 ~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i  398 (537)
                      ..+..+++.+.++.|+.+ ...+.|.+.++. +......+.... ....++.-...|.+..-+......+..........
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~-g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~  155 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  155 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecC-CceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCce
Confidence            456788998766666655 455789999988 333222222211 11222222333444433332221222221111111


Q ss_pred             EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCC
Q psy10942        399 WTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGAD  475 (537)
Q Consensus       399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~d  475 (537)
                      ..+. ....     .....+++++.++.|..+. ..+.|...++............  .....++++.. +.+..+-..+
T Consensus       156 ~~l~-~~~~-----~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~-~~ly~td~~~  228 (266)
T d1ijqa1         156 YSLV-TENI-----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN  228 (266)
T ss_dssp             EEEE-CSSC-----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred             eccc-cccc-----ceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEEC-CEEEEEECCC
Confidence            1111 1100     1457788998877776664 4678998898654433333322  23456777763 3344444467


Q ss_pred             CcEEEEECCCCeeEEEecCCc
Q psy10942        476 GLLKLWSIKTSTCVSTFDKHA  496 (537)
Q Consensus       476 g~v~vwd~~~~~~~~~~~~~~  496 (537)
                      +.|...+..+++....+....
T Consensus       229 ~~I~~~~~~~g~~~~~~~~~~  249 (266)
T d1ijqa1         229 EAIFSANRLTGSDVNLLAENL  249 (266)
T ss_dssp             TEEEEEETTTCCCCEEEECSC
T ss_pred             CeEEEEECCCCcceEEEEcCC
Confidence            888888888887666655443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.78  E-value=2.2  Score=36.98  Aligned_cols=95  Identities=6%  Similarity=-0.031  Sum_probs=52.7

Q ss_pred             eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942          4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY   82 (537)
Q Consensus         4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w   82 (537)
                      +|..++|+  .|.  |+.. .++.+..++..+-......+ ...++..+  ...|        +  .++....++.+.++
T Consensus        88 ~v~~vafs--~d~--l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~--~~~p--------~--~~~l~~~~~~~~~~  150 (381)
T d1xipa_          88 DVIFVCFH--GDQ--VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQL--KNVN--------N--TLVILNSVNDLSAL  150 (381)
T ss_dssp             TEEEEEEE--TTE--EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEE--EECS--------S--EEEEEETTSEEEEE
T ss_pred             CeEEEEee--CCE--EEEE-eCCCEEEEEeeccccccccccccccccce--ecCC--------c--eeEEEecCCCEEEE
Confidence            47778888  553  4333 33447777776654444443 23344444  4555        2  23334447778888


Q ss_pred             eccceehhhhc------CCCcceEEEEEeccccEEEEEe
Q psy10942         83 ETSAVKELYQH------GLSSPLVRIVRSSVKRMYAVVT  115 (537)
Q Consensus        83 d~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~  115 (537)
                      ++..++.....      ...+.+.+++|++.|+.++++.
T Consensus       151 ~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         151 DLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             ETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             EeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            88776432111      1124567777777777766653

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=85.52  E-value=9.7  Score=32.31  Aligned_cols=181  Identities=14%  Similarity=0.224  Sum_probs=99.8

Q ss_pred             EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc------CCCCEEEEEe-C-C--CcEEEEEccCCceee
Q psy10942        287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS------PNDKLLASGS-L-D--KTVKVWSTTGGLKLL  356 (537)
Q Consensus       287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s------~~~~~l~~~~-~-d--~~i~i~d~~~~~~~~  356 (537)
                      +++.....+-|.+||++.... ..     +  ..+.++.+..-      ....-+++++ . +  ..|.+|.+......+
T Consensus        42 lI~gTdK~~Gl~vYdL~G~~l-~~-----~--~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          42 KLITTNKKSGLAVYSLEGKML-HS-----Y--HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             EEEEEETTSCCEEEETTCCEE-EE-----C--CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             EEEEEcCcCCEEEEcCCCcEE-Ee-----c--ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            566666677799999975442 21     1  12455555433      1222344444 2 2  357778775322222


Q ss_pred             EEEE--------------------ecCCCC-EEEEEcCCCcEEEEECC---CC----eeeeeeccCCcceEEEEEecCCC
Q psy10942        357 NVLR--------------------GHKKGT-QIVSTGADGLLKLWSIK---TS----TCVSTFDKHALKIWTLAITKDEN  408 (537)
Q Consensus       357 ~~~~--------------------~~~~~~-~l~~~~~d~~i~i~d~~---~~----~~~~~~~~~~~~i~~~~~~~~~~  408 (537)
                      ..+.                    ....+. +++....+|.+..|.+.   .+    +.++.+....             
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~-------------  180 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNS-------------  180 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSS-------------
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCC-------------
Confidence            2111                    111233 45666677777777653   22    1222222221             


Q ss_pred             ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-----ceeeeEeec--CCcceEEEEEec--CCC-EEEEEe-CCCc
Q psy10942        409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-----YVCLKSLEG--HDASVLRCHFIN--KGT-QIVSTG-ADGL  477 (537)
Q Consensus       409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~--~~~~v~~~~~s~--~~~-~l~s~~-~dg~  477 (537)
                           .+..+.+++..+.|..+-++..|..+++..     ...+....+  ..+.+..++.-.  ++. +|++.+ .+++
T Consensus       181 -----q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~  255 (353)
T d1h6la_         181 -----QTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSS  255 (353)
T ss_dssp             -----CEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred             -----ccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCe
Confidence                 677889999999999998887777776542     233322222  345677777543  323 555444 5788


Q ss_pred             EEEEECCC-CeeEEEec
Q psy10942        478 LKLWSIKT-STCVSTFD  493 (537)
Q Consensus       478 v~vwd~~~-~~~~~~~~  493 (537)
                      ..|||..+ .+.+..|.
T Consensus       256 f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         256 YAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEEEESSTTCCEEEEEE
T ss_pred             EEEEecCCCccccceEE
Confidence            99999876 46666664

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.98  E-value=11  Score=32.27  Aligned_cols=103  Identities=13%  Similarity=0.088  Sum_probs=64.2

Q ss_pred             eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942        414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD  493 (537)
Q Consensus       414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~  493 (537)
                      .|..++|+.|  .|+.. .++.+..++............-..++.++.++|.  .++....+|.+.++++.+++......
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~  162 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ  162 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccC
Confidence            5667788655  45554 4466888887664433343334567888888775  56677788999999998886543322


Q ss_pred             CCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942        494 KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW  530 (537)
Q Consensus       494 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~  530 (537)
                      +-....    +  ..+..++   +|++.|..++++..
T Consensus       163 ~v~~~~----~--~~~~~~v---~ws~kgkq~v~~~g  190 (381)
T d1xipa_         163 NVTSFD----V--TNSQLAV---LLKDRSFQSFAWRN  190 (381)
T ss_dssp             SEEEEE----E--CSSEEEE---EETTSCEEEEEEET
T ss_pred             CcceEE----e--cCCceEE---EEeCCcEEEEEeCC
Confidence            111111    0  0112556   99999999988743

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.20  E-value=18  Score=31.59  Aligned_cols=67  Identities=19%  Similarity=0.143  Sum_probs=39.3

Q ss_pred             CCCCEEEEE-eCCC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE-eC---CCcEEEEECCCCee
Q psy10942        422 PLDRILISS-SGDA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST-GA---DGLLKLWSIKTSTC  488 (537)
Q Consensus       422 ~~~~~l~~~-~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~---dg~v~vwd~~~~~~  488 (537)
                      ..+.+|+.. ..++  .|+++++.+++.........+.+..+...++...+... +.   =.++.-+|+.+++.
T Consensus       344 ~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         344 VRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             ETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             EECCEEEEEEEcCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            334455544 3443  58889998877655544444556555555555444322 22   26788899988754