Psyllid ID: psy11070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MPVATASSDSEGKTKELNKEIDDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYPVA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccHHHHHHHHHHHccccHHHEEccccccccccccccEccccccccEEccHHHHHHHHHHcccccccEccccccccccccHHHHHHHHHHcccccccEEEcccccccEcccccHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mpvatassdsegktkelnkeIDDEEDAITEALQSLginkeyfisstggknskkqqlwscpikncnkrFTTLSNLKmhmvrhgkpltlcceelgcgrkfqtMKQYSTHLkehsnvsapymcdykgvCMSLTLKISFVKAVannskypva
Flexible Loop (DISEMBL)
mpvatassdsegktkelnkeiddeEDAITEALQSLGINKEYFISstggknskkqqlwscpiknCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVkavannskypva
Low Complexity Region (SEG)
MPVATASSDSEGKTKELNKeiddeedaiteaLQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYPVA
Disordered region (IsUnstruct)
********************************QSLGINKEYFIS*********QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVA********
Disordered Region (DISOPRED)
*******************EIDDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVK***********
Disordered Region (DISEMBL)
******************KEIDDEEDAITEALQSLGINKEYFISS**********LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVA********
Disordered Region (DISPRO)
********************IDDEEDAITEALQSLGINKEYFISST*****KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVATASSDSEGKxxxxxxxxxxxxxxxxxxxxxLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYPVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
Q8C8V1	858	Zinc finger protein ZXDC	yes	N/A	0.5	0.086	0.355	2e-08
Q2QGD7	858	Zinc finger protein ZXDC	yes	N/A	0.5	0.086	0.355	2e-08
A2CE44	873	Zinc finger X-linked prot	no	N/A	0.5	0.084	0.355	8e-08
Q5XIU2	638	Zinc finger protein 143 O	no	N/A	0.628	0.145	0.3	9e-08
O70230	638	Zinc finger protein 143 O	no	N/A	0.628	0.145	0.3	9e-08
Q8BKX7	478	Zinc finger protein 410 O	no	N/A	0.506	0.156	0.315	2e-07
P52747	638	Zinc finger protein 143 O	no	N/A	0.628	0.145	0.29	3e-07
Q86VK4	478	Zinc finger protein 410 O	no	N/A	0.506	0.156	0.315	4e-07
Q5EAC5	467	Zinc finger protein 410 O	no	N/A	0.506	0.160	0.315	8e-07
P98169	803	Zinc finger X-linked prot	no	N/A	0.5	0.092	0.342	1e-06

>sp|Q8C8V1|ZXDC_MOUSE Zinc finger protein ZXDC OS=Mus musculus GN=Zxdc PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           ++  K + +SCP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + ++H 
Sbjct: 231 QSHDKLRPFSCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLNSHQ 288

Query: 109 KEHSNVSAPYMCDYKG 124
           + H     PY CD+ G
Sbjct: 289 RSHFEPERPYKCDFPG 304

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.
Mus musculus (taxid: 10090)

>sp|Q2QGD7|ZXDC_HUMAN Zinc finger protein ZXDC OS=Homo sapiens GN=ZXDC PE=1 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           ++  K + + CP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H 
Sbjct: 230 QSHDKLRPFGCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLSSHQ 287

Query: 109 KEHSNVSAPYMCDYKG 124
           + H     PY CD+ G
Sbjct: 288 RSHFEPERPYKCDFPG 303

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|A2CE44|ZXDAB_MOUSE Zinc finger X-linked protein ZXDA/ZXDB OS=Mus musculus GN=Zxda PE=2 SV=1

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           ++  K + + CP++ C K FTT+ NLK HM  H +  +  CE   C   F T  + STH 
Sbjct: 395 QSHDKLRPFGCPVQGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSTHQ 452

Query: 109 KEHSNVSAPYMCDYKG 124
           + H     PY C + G
Sbjct: 453 RSHFEPERPYQCAFSG 468

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Mus musculus (taxid: 10090)

>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 25  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP 84
           ED  T++ ++ G  +++  + TG      ++ + CPI+ C + FTT +  K+H+  H   
Sbjct: 301 EDNCTKSFKTSGDLQKHIRTHTG------ERPFKCPIEGCGRSFTTSNIRKVHIRTHTGE 354

Query: 85  LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG 124
               C E GCGR F +   Y  H++ H+    PY+C   G
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTG-EKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Rattus norvegicus (taxid: 10116)

>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 25  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP 84
           ED  T++ ++ G  +++  + TG      ++ + CPI+ C + FTT +  K+H+  H   
Sbjct: 301 EDNCTKSFKTSGDLQKHIRTHTG------ERPFKCPIEGCGRSFTTSNIRKVHIRTHTGE 354

Query: 85  LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG 124
               C E GCGR F +   Y  H++ H+    PY+C   G
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTG-EKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Mus musculus (taxid: 10090)

>sp|Q8BKX7|ZN410_MOUSE Zinc finger protein 410 OS=Mus musculus GN=Znf410 PE=2 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           K  + ++ + CP + C K F  L  LK+HM  H       C E GCG++F T      H 
Sbjct: 241 KTHRNERSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAGNLKNHR 300

Query: 109 KEHSNVSAPYMCDYKG 124
           + H+    P++C+ +G
Sbjct: 301 RIHTG-EKPFLCEAQG 315

Transcription factor that activates transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence.

Mus musculus (taxid: 10090)

>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 25  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP 84
           ED  T++ ++ G  +++  + TG      ++ + CP + C + FTT +  K+H+  H   
Sbjct: 301 EDNCTKSFKTSGDLQKHIRTHTG------ERPFKCPFEGCGRSFTTSNIRKVHVRTHTGE 354

Query: 85  LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG 124
               C E GCGR F +   Y  H++ H+    PY+C   G
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTG-EKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Homo sapiens (taxid: 9606)

>sp|Q86VK4|ZN410_HUMAN Zinc finger protein 410 OS=Homo sapiens GN=ZNF410 PE=1 SV=2

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           K  +  + + CP + C K F  L  LK+HM  H       C E GCG++F T      H 
Sbjct: 241 KTHRNDRSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAGNLKNHR 300

Query: 109 KEHSNVSAPYMCDYKG 124
           + H+    P++C+ +G
Sbjct: 301 RIHTG-EKPFLCEAQG 315

Transcription factor that activates transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence.

Homo sapiens (taxid: 9606)

>sp|Q5EAC5|ZN410_BOVIN Zinc finger protein 410 OS=Bos taurus GN=ZNF410 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           K  +  + + CP   C K F  L  LK+HM  H       C E  CG++F T      HL
Sbjct: 241 KTHRNDRSFICPAAGCGKSFYVLQRLKVHMRTHNGEKPFVCPESNCGKQFTTAGNLKNHL 300

Query: 109 KEHSNVSAPYMCDYKG 124
           + H+    P++C+ +G
Sbjct: 301 RIHTG-EKPFLCEAQG 315

Transcription factor that activates transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence.

Bos taurus (taxid: 9913)

>sp|P98169|ZXDB_HUMAN Zinc finger X-linked protein ZXDB OS=Homo sapiens GN=ZXDB PE=2 SV=2

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           ++  K + + CP + C K FTT+ NLK HM  H +  +  CE   C   F T  + S H 
Sbjct: 326 QSHDKLRPFGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSAHQ 383

Query: 109 KEHSNVSAPYMCDYKG 124
           + H     PY C + G
Sbjct: 384 RSHFEPERPYQCAFSG 399

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
322788189	1004	hypothetical protein SINV_08318 [Solenop	0.405	0.059	0.388	7e-10
332027659	997	Zinc finger X-linked protein ZXDB [Acrom	0.405	0.060	0.388	7e-10
307176119	945	Zinc finger X-linked protein ZXDB [Campo	0.398	0.062	0.409	2e-09
328788295	1033	PREDICTED: hypothetical protein LOC10057	0.405	0.058	0.375	5e-09
350399130	1026	PREDICTED: hypothetical protein LOC10074	0.405	0.058	0.375	6e-09
340714417	1026	PREDICTED: hypothetical protein LOC10065	0.405	0.058	0.375	7e-09
383863735	1034	PREDICTED: uncharacterized protein LOC10	0.351	0.050	0.375	4e-08
387020013	465	Zinc finger protein 410-like [Crotalus a	0.506	0.161	0.355	7e-08
427792249	591	Putative zxd family zinc finger c, parti	0.439	0.109	0.393	7e-08
427790989	604	Putative zxd family zinc finger c, parti	0.439	0.107	0.393	8e-08

>gi|322788189|gb|EFZ13971.1| hypothetical protein SINV_08318 [Solenopsis invicta]

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C ++ CN+RFTT+ NL  H   H +P  + C+   CG KFQT +    H+K H 
Sbjct: 507 KRKDYVCEVEGCNRRFTTVYNLWSHAKLHSRPNRIICQVPDCGEKFQTKRALELHMKSHD 566

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 567 QRHAPYVCQHEG 578

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027659|gb|EGI67727.1| Zinc finger X-linked protein ZXDB [Acromyrmex echinatior]

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C ++ CN+RFTT+ NL  H   H +P  + C+   CG KFQT +    H+K H 
Sbjct: 507 KRKDYVCEVEGCNRRFTTVYNLWSHAKLHNRPNRIVCQVPDCGEKFQTKRALELHMKSHD 566

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 567 QRHAPYVCQHEG 578

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176119|gb|EFN65817.1| Zinc finger X-linked protein ZXDB [Camponotus floridanus]

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY 118
           C ++ CN+RFTT+ NL  H   H +P  + C+   CG KFQT +    H+K H    APY
Sbjct: 448 CQVEGCNRRFTTVYNLWSHEKLHSRPNRIVCQVPNCGEKFQTKRALELHMKSHDQRHAPY 507

Query: 119 MCDYKG 124
           +C ++G
Sbjct: 508 VCQHEG 513

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788295|ref|XP_003251098.1| PREDICTED: hypothetical protein LOC100577295 [Apis mellifera]

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C ++ CN+RFTT+ NL  H   H +P  + C+   C  KFQT +    H+K H 
Sbjct: 533 KRKDYVCEVEGCNRRFTTIYNLWSHAKLHSRPNRILCQVPDCQEKFQTKRALELHMKTHD 592

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 593 QSHAPYICKHEG 604

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399130|ref|XP_003485431.1| PREDICTED: hypothetical protein LOC100745564 [Bombus impatiens]

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C ++ CN+RFTT+ NL  H   H +P  + C+   C  KFQT +    H+K H 
Sbjct: 535 KRKDYVCEVEGCNRRFTTIYNLWSHAKLHTRPNRIVCQVPDCQEKFQTKRALELHMKSHD 594

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 595 QSHAPYVCKHEG 606

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714417|ref|XP_003395725.1| PREDICTED: hypothetical protein LOC100650640 [Bombus terrestris]

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C ++ CN+RFTT+ NL  H   H +P  + C+   C  KFQT +    H+K H 
Sbjct: 535 KRKDYVCEVEGCNRRFTTIYNLWSHAKLHTRPNRIVCQVPDCQEKFQTKRALELHMKSHD 594

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 595 QSHAPYVCKHEG 606

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863735|ref|XP_003707335.1| PREDICTED: uncharacterized protein LOC100877567 [Megachile rotundata]

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%)

Query: 53  KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           K++ + C  + CN+RFTT+ NL  H   H +P  + C+   C  KFQT +    H+K H 
Sbjct: 533 KRKDYICKREGCNRRFTTIYNLWSHEKLHSRPNRILCQVPDCQEKFQTKRALELHMKSHD 592

Query: 113 NVSAPYMCDYKG 124
              APY+C ++G
Sbjct: 593 QSHAPYVCKHEG 604

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|387020013|gb|AFJ52124.1| Zinc finger protein 410-like [Crotalus adamanteus]

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 49  KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
           K  +  + ++CP K+C K F  L  LK+HM  H       C ELGCG++F T      HL
Sbjct: 244 KTHRNDRSYTCPAKDCGKSFYVLQRLKVHMRTHNGEKPFICSELGCGKQFTTAGNLKNHL 303

Query: 109 KEHSNVSAPYMCDYKG 124
           + H+    P++C+ +G
Sbjct: 304 RIHTG-EKPFLCEAQG 318

Source: Crotalus adamanteus

Species: Crotalus adamanteus

Genus: Crotalus

Family: Viperidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427792249|gb|JAA61576.1| Putative zxd family zinc finger c, partial [Rhipicephalus pulchellus]

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY 118
           C ++ C + FTT+ NL+ HM  HG+P+   C   GC + F T ++   HL+EH  + APY
Sbjct: 231 CDVEGCGQHFTTVYNLRAHMKLHGRPM-FGCPSPGCSQVFGTRRKMELHLREHQELDAPY 289

Query: 119 MCDYKG 124
            C  +G
Sbjct: 290 RCTEEG 295

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427790989|gb|JAA60946.1| Putative zxd family zinc finger c, partial [Rhipicephalus pulchellus]

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY 118
           C ++ C + FTT+ NL+ HM  HG+P+   C   GC + F T ++   HL+EH  + APY
Sbjct: 231 CDVEGCGQHFTTVYNLRAHMKLHGRPM-FGCPSPGCSQVFGTRRKMELHLREHQELDAPY 289

Query: 119 MCDYKG 124
            C  +G
Sbjct: 290 RCTEEG 295

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
UNIPROTKB|F1NJ79	368	ZNF410 "Uncharacterized protei	0.506	0.203	0.342	6e-10
UNIPROTKB|F1NEH8	372	ZNF410 "Uncharacterized protei	0.506	0.201	0.342	6.1e-10
UNIPROTKB|F1RMH4	842	ZXDC "Uncharacterized protein"	0.533	0.093	0.365	1.4e-09
UNIPROTKB|F1MWD7	749	ZXDC "Uncharacterized protein"	0.533	0.105	0.353	2.5e-09
UNIPROTKB|G3MYH0	760	ZXDC "Uncharacterized protein"	0.533	0.103	0.353	2.6e-09
RGD|1561296	856	Zxdc "ZXD family zinc finger C	0.533	0.092	0.353	3e-09
MGI|MGI:1933108	858	Zxdc "ZXD family zinc finger C	0.533	0.092	0.353	3e-09
RGD|1563355	583	Zxdb "zinc finger, X-linked, d	0.533	0.135	0.353	3.7e-09
RGD|1585677	583	LOC683516 "similar to Zinc fin	0.533	0.135	0.353	3.7e-09
RGD|1585685	583	LOC683508 "similar to Zinc fin	0.533	0.135	0.353	3.7e-09

UNIPROTKB|F1NJ79 ZNF410 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 149 (57.5 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 26/76 (34%), Positives = 40/76 (52%)

Query:    49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
             K  +  + ++CP + C K F  L  LK+HM  H       C ELGCG++F T      HL
Sbjct:   249 KTHRNDRSFTCPAEGCGKSFYVLQRLKVHMRTHNGEKPFVCTELGCGKQFTTAGNLKNHL 308

Query:   109 KEHSNVSAPYMCDYKG 124
             + H+    P++C+ +G
Sbjct:   309 RIHTG-EKPFLCEAQG 323

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NEH8 ZNF410 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 149 (57.5 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 26/76 (34%), Positives = 40/76 (52%)

Query:    49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL 108
             K  +  + ++CP + C K F  L  LK+HM  H       C ELGCG++F T      HL
Sbjct:   249 KTHRNDRSFTCPAEGCGKSFYVLQRLKVHMRTHNGEKPFVCTELGCGKQFTTAGNLKNHL 308

Query:   109 KEHSNVSAPYMCDYKG 124
             + H+    P++C+ +G
Sbjct:   309 RIHTG-EKPFLCEAQG 323

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RMH4 ZXDC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/82 (36%), Positives = 42/82 (51%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H + H 
Sbjct:   233 KLRPFGCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLSSHQRSHF 290

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY CDY G C    + +S
Sbjct:   291 EPERPYKCDYPG-CEKTFITVS 311

GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MWD7 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 29/82 (35%), Positives = 42/82 (51%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H + H 
Sbjct:   155 KLRPFGCPVGGCGKKFTTVYNLKAHMKAHEQESLFKCEV--CAERFPTHAKLSSHQRSHF 212

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY CD+ G C    + +S
Sbjct:   213 EPERPYKCDFPG-CEKTFITVS 233

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3MYH0 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 29/82 (35%), Positives = 42/82 (51%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H + H 
Sbjct:   156 KLRPFGCPVGGCGKKFTTVYNLKAHMKAHEQESLFKCEV--CAERFPTHAKLSSHQRSHF 213

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY CD+ G C    + +S
Sbjct:   214 EPERPYKCDFPG-CEKTFITVS 234

GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1561296 Zxdc "ZXD family zinc finger C" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 29/82 (35%), Positives = 43/82 (52%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + +SCP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + ++H + H 
Sbjct:   235 KLRPFSCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLNSHQRSHF 292

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY CD+ G C    + +S
Sbjct:   293 EPERPYKCDFPG-CEKTFITVS 313

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA;ISO

MGI|MGI:1933108 Zxdc "ZXD family zinc finger C" [Mus musculus (taxid:10090)]

 Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 29/82 (35%), Positives = 43/82 (52%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + +SCP+  C K+FTT+ NLK HM  H +     CE   C  +F T  + ++H + H 
Sbjct:   235 KLRPFSCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLNSHQRSHF 292

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY CD+ G C    + +S
Sbjct:   293 EPERPYKCDFPG-CEKTFITVS 313

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030275 "LRR domain binding" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0070742 "C2H2 zinc finger domain binding" evidence=ISO

RGD|1563355 Zxdb "zinc finger, X-linked, duplicated B" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 29/82 (35%), Positives = 41/82 (50%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP++ C K FTT+ NLK HM  H +  +  CE   C   F T  + STH + H 
Sbjct:   106 KLRPFGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSTHQRSHF 163

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY C + G C    + +S
Sbjct:   164 EPERPYQCAFSG-CKKTFITVS 184

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585677 LOC683516 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 29/82 (35%), Positives = 41/82 (50%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP++ C K FTT+ NLK HM  H +  +  CE   C   F T  + STH + H 
Sbjct:   106 KLRPFGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSTHQRSHF 163

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY C + G C    + +S
Sbjct:   164 EPERPYQCAFSG-CKKTFITVS 184

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585685 LOC683508 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 29/82 (35%), Positives = 41/82 (50%)

Query:    53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
             K + + CP++ C K FTT+ NLK HM  H +  +  CE   C   F T  + STH + H 
Sbjct:   106 KLRPFGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSTHQRSHF 163

Query:   113 NVSAPYMCDYKGVCMSLTLKIS 134
                 PY C + G C    + +S
Sbjct:   164 EPERPYQCAFSG-CKKTFITVS 184

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
KOG2462|consensus	279		99.89
KOG2462|consensus	279		99.89
KOG1074|consensus	958		99.63
KOG3576|consensus	267		99.63
KOG3623|consensus	1007		99.6
KOG3623|consensus	1007		99.49
KOG3576|consensus	267		99.48
KOG1074|consensus	958		99.25
KOG3608|consensus	467		99.24
PHA00733	128	hypothetical protein	99.14
PHA02768	55	hypothetical protein; Provisional	98.92
KOG3608|consensus	467		98.9
PHA02768	55	hypothetical protein; Provisional	98.84
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.82
PLN03086	567	PRLI-interacting factor K; Provisional	98.8
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.67
PHA00733	128	hypothetical protein	98.61
PLN03086	567	PRLI-interacting factor K; Provisional	98.59
KOG3993|consensus	500		98.35
PHA00616	44	hypothetical protein	98.33
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.29
PHA00616	44	hypothetical protein	98.27
PHA00732	79	hypothetical protein	98.07
PHA00732	79	hypothetical protein	98.06
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.81
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.71
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.71
KOG3993|consensus	500		97.64
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.61
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.49
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.27
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.26
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.17
smart00355	26	ZnF_C2H2 zinc finger.	96.92
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.74
PRK04860	160	hypothetical protein; Provisional	96.67
smart00355	26	ZnF_C2H2 zinc finger.	96.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.58
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.42
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.65
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.49
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.1
COG5048	467	FOG: Zn-finger [General function prediction only]	94.37
KOG4173|consensus	253		94.21
PRK04860	160	hypothetical protein; Provisional	93.75
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.09
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.75
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.66
COG5048	467	FOG: Zn-finger [General function prediction only]	90.46
KOG2893|consensus	341		90.23
KOG1146|consensus	1406		89.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.04
KOG1146|consensus	1406		87.61
COG5189	423	SFP1 Putative transcriptional repressor regulating	87.27
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.13
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.14
PRK06266	178	transcription initiation factor E subunit alpha; V	83.59

>KOG2462|consensus

Probab=99.89  E-value=5.4e-24  Score=146.41  Aligned_cols=107  Identities=22%  Similarity=0.448  Sum_probs=70.7

Q ss_pred             HhhhhcCCCCcceeeccC---CCccC---CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChH
Q psy11070         29 TEALQSLGINKEYFISST---GGKNS---KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMK  102 (148)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~---~~~~h---~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~  102 (148)
                      ...+.+..|++.|...++   |...|   ...+.+.|.  .|+|.|...-.|++|+++|+  .++.|.  .||+.|.+++
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~--~C~K~YvSmpALkMHirTH~--l~c~C~--iCGKaFSRPW  201 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCK--YCGKVYVSMPALKMHIRTHT--LPCECG--ICGKAFSRPW  201 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCC--CCCceeeehHHHhhHhhccC--CCcccc--cccccccchH
Confidence            344566677777777665   33333   124556677  77777777777777777765  456677  6777777777


Q ss_pred             HHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        103 QYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       103 ~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      .|+-|+|+|+| ||||.|..|+|  +|..+++|+-|+.+|+.
T Consensus       202 LLQGHiRTHTG-EKPF~C~hC~k--AFADRSNLRAHmQTHS~  240 (279)
T KOG2462|consen  202 LLQGHIRTHTG-EKPFSCPHCGK--AFADRSNLRAHMQTHSD  240 (279)
T ss_pred             HhhcccccccC-CCCccCCcccc--hhcchHHHHHHHHhhcC
Confidence            77777777777 67777777776  47777777777777654

>KOG2462|consensus

Probab=99.89  E-value=3.1e-23  Score=142.68  Aligned_cols=104  Identities=22%  Similarity=0.337  Sum_probs=95.3

Q ss_pred             HhhhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHH
Q psy11070         29 TEALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYS  105 (148)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~  105 (148)
                      .....+..|++.|-....   |+++|.  -+++|.  +|||.|.+.=-|+.|+|+|+|||||.|.  .|+++|...++|+
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~--iCGKaFSRPWLLQGHiRTHTGEKPF~C~--hC~kAFADRSNLR  232 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECG--ICGKAFSRPWLLQGHIRTHTGEKPFSCP--HCGKAFADRSNLR  232 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccc--cccccccchHHhhcccccccCCCCccCC--cccchhcchHHHH
Confidence            455678889999988866   888887  568888  9999999999999999999999999999  9999999999999


Q ss_pred             HHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHh
Q psy11070        106 THLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       106 ~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      .|+++|.+ .|+|.|..|+|  +|...+.|.+|...
T Consensus       233 AHmQTHS~-~K~~qC~~C~K--sFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  233 AHMQTHSD-VKKHQCPRCGK--SFALKSYLNKHSES  265 (279)
T ss_pred             HHHHhhcC-CccccCcchhh--HHHHHHHHHHhhhh
Confidence            99999999 89999999998  79999999999764

>KOG1074|consensus

Probab=99.63  E-value=3.2e-17  Score=126.90  Aligned_cols=56  Identities=18%  Similarity=0.279  Sum_probs=51.6

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      .|-+|.  .|.++...+.+|+.|.|+|+| ||||+|++||+  +|+.+.+|+.|+.+|.-.
T Consensus       604 dPNqCi--iC~rVlSC~saLqmHyrtHtG-ERPFkCKiCgR--AFtTkGNLkaH~~vHka~  659 (958)
T KOG1074|consen  604 DPNQCI--ICLRVLSCPSALQMHYRTHTG-ERPFKCKICGR--AFTTKGNLKAHMSVHKAK  659 (958)
T ss_pred             Ccccee--eeeecccchhhhhhhhhcccC-cCccccccccc--hhccccchhhcccccccC
Confidence            457799  999999999999999999999 99999999999  599999999999998743

>KOG3576|consensus

Probab=99.63  E-value=2.3e-16  Score=104.62  Aligned_cols=89  Identities=22%  Similarity=0.428  Sum_probs=81.5

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccc
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSL  129 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f  129 (148)
                      ..++...|.|.  .|+|.|.....|.+|++-|...+.+.|.  .||+.|..--.|++|+|+|+| .+||+|..|+|  +|
T Consensus       111 sssd~d~ftCr--vCgK~F~lQRmlnrh~kch~~vkr~lct--~cgkgfndtfdlkrh~rthtg-vrpykc~~c~k--af  183 (267)
T KOG3576|consen  111 SSSDQDSFTCR--VCGKKFGLQRMLNRHLKCHSDVKRHLCT--FCGKGFNDTFDLKRHTRTHTG-VRPYKCSLCEK--AF  183 (267)
T ss_pred             CCCCCCeeeee--hhhhhhhHHHHHHHHhhhccHHHHHHHh--hccCcccchhhhhhhhccccC-ccccchhhhhH--HH
Confidence            34556679999  9999999999999999999999999999  999999999999999999999 89999999998  69


Q ss_pred             ccHHHHHHHHHhhCCC
Q psy11070        130 TLKISFVKAVANNSKY  145 (148)
Q Consensus       130 ~~~~~l~~h~~~h~~~  145 (148)
                      +++-.|..|++.-++.
T Consensus       184 tqrcsleshl~kvhgv  199 (267)
T KOG3576|consen  184 TQRCSLESHLKKVHGV  199 (267)
T ss_pred             HhhccHHHHHHHHcCc
Confidence            9999999999877664

>KOG3623|consensus

Probab=99.60  E-value=1.6e-16  Score=121.70  Aligned_cols=81  Identities=22%  Similarity=0.467  Sum_probs=76.9

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHH
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKI  133 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~  133 (148)
                      +.+|.|.  .|+|.|...+.|.+|.-.|+|.+||+|.  +|.++|+.+-.|..|.|.|.| +|||.|+.|+|  +|....
T Consensus       892 ~gmyaCD--qCDK~FqKqSSLaRHKYEHsGqRPyqC~--iCkKAFKHKHHLtEHkRLHSG-EKPfQCdKClK--RFSHSG  964 (1007)
T KOG3623|consen  892 DGMYACD--QCDKAFQKQSSLARHKYEHSGQRPYQCI--ICKKAFKHKHHLTEHKRLHSG-EKPFQCDKCLK--RFSHSG  964 (1007)
T ss_pred             cccchHH--HHHHHHHhhHHHHHhhhhhcCCCCcccc--hhhHhhhhhhhhhhhhhhccC-CCcchhhhhhh--hccccc
Confidence            4579999  9999999999999999999999999999  999999999999999999999 99999999998  799999


Q ss_pred             HHHHHHHh
Q psy11070        134 SFVKAVAN  141 (148)
Q Consensus       134 ~l~~h~~~  141 (148)
                      .+..||..
T Consensus       965 SYSQHMNH  972 (1007)
T KOG3623|consen  965 SYSQHMNH  972 (1007)
T ss_pred             chHhhhcc
Confidence            99999864

>KOG3623|consensus

Probab=99.49  E-value=3.4e-15  Score=114.56  Aligned_cols=112  Identities=22%  Similarity=0.375  Sum_probs=88.9

Q ss_pred             chhHHHHhhhhcCCCCcceeeccC---CCcc--CCCCCceeCCCcccccccCChHHHHHHHHHhcC-------------C
Q psy11070         23 DEEDAITEALQSLGINKEYFISST---GGKN--SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK-------------P   84 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~-------------~   84 (148)
                      ...+.......+..|.+-+.+...   |++.  ...+..|.|.  .|.++|.+.+.|.+||.+|..             -
T Consensus       202 gtpdAfsqlltcpycdrgykrltslkeHikyrhekne~nfsC~--lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~l  279 (1007)
T KOG3623|consen  202 GTPDAFSQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCM--LCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALL  279 (1007)
T ss_pred             CCcchhhhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcch--hhhhhhhhHHHHHHHHHhhcCCCcccccccchhhh
Confidence            334444445566677776665543   4433  2345569999  999999999999999999853             2


Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHh
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      +.|+|.  .|+++|+.+-.|+.|+|+|.| +|||.|.-|+|  +|.....+..|+..
T Consensus       280 RKFKCt--ECgKAFKfKHHLKEHlRIHSG-EKPfeCpnCkK--RFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  280 RKFKCT--ECGKAFKFKHHLKEHLRIHSG-EKPFECPNCKK--RFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccccc--ccchhhhhHHHHHhhheeecC-CCCcCCccccc--ccccCCcccccccc
Confidence            569999  999999999999999999999 99999999998  79888888888753

>KOG3576|consensus

Probab=99.48  E-value=6.2e-15  Score=97.90  Aligned_cols=106  Identities=19%  Similarity=0.255  Sum_probs=88.0

Q ss_pred             hhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHH
Q psy11070         32 LQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL  108 (148)
Q Consensus        32 ~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~  108 (148)
                      +.+.-|++.|....-   |++.|+..|.+.|.  .||+.|.....|++|+++|+|.+||.|.  .|+++|.+.-.|-.|.
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct--~cgkgfndtfdlkrh~rthtgvrpykc~--~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCT--FCGKGFNDTFDLKRHTRTHTGVRPYKCS--LCEKAFTQRCSLESHL  193 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHh--hccCcccchhhhhhhhccccCccccchh--hhhHHHHhhccHHHHH
Confidence            344557777766543   89999999999999  9999999999999999999999999999  9999999999999998


Q ss_pred             H-HhcC---------CCCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        109 K-EHSN---------VSAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       109 ~-~h~~---------~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      + +|..         .++.|.|+.||.  .-.....+..|++.|+
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~--t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGY--TSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCC--CCCChhHHHHHHHhcC
Confidence            6 4442         157799999996  3555566778887765

>KOG1074|consensus

Probab=99.25  E-value=8.7e-13  Score=102.83  Aligned_cols=85  Identities=20%  Similarity=0.343  Sum_probs=77.0

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCC----CceeCC---CCCCCc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVS----APYMCD---YKGVCM  127 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~----k~~~C~---~c~~~~  127 (148)
                      .|..|.  +|.+.+.-...|++|+++|+|++||+|+  +||++|.++.+|+.|+.+|.. .    -+|.|+   +|-+  
T Consensus       604 dPNqCi--iC~rVlSC~saLqmHyrtHtGERPFkCK--iCgRAFtTkGNLkaH~~vHka-~p~~R~q~ScP~~~ic~~--  676 (958)
T KOG1074|consen  604 DPNQCI--ICLRVLSCPSALQMHYRTHTGERPFKCK--ICGRAFTTKGNLKAHMSVHKA-KPPARVQFSCPSTFICQK--  676 (958)
T ss_pred             Ccccee--eeeecccchhhhhhhhhcccCcCccccc--cccchhccccchhhccccccc-CccccccccCCchhhhcc--
Confidence            468899  9999999999999999999999999999  999999999999999999986 3    247899   9987  


Q ss_pred             ccccHHHHHHHHHhhCCCC
Q psy11070        128 SLTLKISFVKAVANNSKYP  146 (148)
Q Consensus       128 ~f~~~~~l~~h~~~h~~~~  146 (148)
                      .|.....|..|+++|.+-.
T Consensus       677 kftn~V~lpQhIriH~~~~  695 (958)
T KOG1074|consen  677 KFTNAVTLPQHIRIHLGGQ  695 (958)
T ss_pred             cccccccccceEEeecCCC
Confidence            6999999999999988544

>KOG3608|consensus

Probab=99.24  E-value=4.1e-12  Score=90.87  Aligned_cols=105  Identities=23%  Similarity=0.339  Sum_probs=74.6

Q ss_pred             hhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHH------------------------------H
Q psy11070         32 LQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMH------------------------------M   78 (148)
Q Consensus        32 ~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h------------------------------~   78 (148)
                      +.+..|-+.+..+..   |++.|+++|...|+  .||.-|.+.+.|-.|                              +
T Consensus       180 C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp--~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv  257 (467)
T KOG3608|consen  180 CNWAMCTKHMGNKYRLREHIRTHSNEKVVACP--HCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHV  257 (467)
T ss_pred             ccchhhhhhhccHHHHHHHHHhcCCCeEEecc--hHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHH
Confidence            455556555555543   67777777655555  555555555544444                              4


Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      +.|.  ..|.|+  .|.......+.|..|++ .|.. +|||+|+.|++  +|.+.+.|.+|...|++.
T Consensus       258 ~rHv--n~ykCp--lCdmtc~~~ssL~~H~r~rHs~-dkpfKCd~Cd~--~c~~esdL~kH~~~HS~~  318 (467)
T KOG3608|consen  258 VRHV--NCYKCP--LCDMTCSSASSLTTHIRYRHSK-DKPFKCDECDT--RCVRESDLAKHVQVHSKT  318 (467)
T ss_pred             HHhh--hccccc--ccccCCCChHHHHHHHHhhhcc-CCCccccchhh--hhccHHHHHHHHHhcccc
Confidence            4443  357777  78888888888888887 4777 89999999997  799999999999999854

>PHA00733 hypothetical protein

Probab=99.14  E-value=6.5e-11  Score=75.06  Aligned_cols=86  Identities=13%  Similarity=0.109  Sum_probs=71.5

Q ss_pred             CCCceeCCCcccccccCChHHHHHH--HH---HhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCc
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMH--MV---RHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCM  127 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h--~~---~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~  127 (148)
                      .++++.|.  .|.+.|.....|..+  +.   .+.+.+||.|.  .|++.|.....|..|++.|.   .+|.|..|++  
T Consensus        37 ~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~--~Cgk~Fss~s~L~~H~r~h~---~~~~C~~CgK--  107 (128)
T PHA00733         37 EQKRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP--LCLMPFSSSVSLKQHIRYTE---HSKVCPVCGK--  107 (128)
T ss_pred             hhhhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCCccCC--CCCCcCCCHHHHHHHHhcCC---cCccCCCCCC--
Confidence            35779999  999888877766655  22   23457899999  99999999999999999763   5799999998  


Q ss_pred             ccccHHHHHHHHHhhCCCCC
Q psy11070        128 SLTLKISFVKAVANNSKYPV  147 (148)
Q Consensus       128 ~f~~~~~l~~h~~~h~~~~~  147 (148)
                      .|.....|..|+...+++=|
T Consensus       108 ~F~~~~sL~~H~~~~h~~~~  127 (128)
T PHA00733        108 EFRNTDSTLDHVCKKHNICV  127 (128)
T ss_pred             ccCCHHHHHHHHHHhcCccc
Confidence            69999999999999888755

>PHA02768 hypothetical protein; Provisional

Probab=98.92  E-value=6.1e-10  Score=59.35  Aligned_cols=40  Identities=20%  Similarity=0.475  Sum_probs=18.8

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMK  102 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~  102 (148)
                      |.|+  .||+.|...++|..||+.|+  +++.|.  .|++.|.+.+
T Consensus         6 y~C~--~CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s   45 (55)
T PHA02768          6 YECP--ICGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTG   45 (55)
T ss_pred             cCcc--hhCCeeccHHHHHHHHHhcC--CcccCC--cccceecccc
Confidence            3444  44444444444444444444  344444  4444444443

>KOG3608|consensus

Probab=98.90  E-value=4.4e-09  Score=75.63  Aligned_cols=81  Identities=20%  Similarity=0.441  Sum_probs=48.4

Q ss_pred             eeCCCcccccccCChHHHHHHHHH-hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVR-HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISF  135 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l  135 (148)
                      |+|+  .|+-+....+.|..||+. |+..+||+|.  .|...|.+.+.|..|..+|..  -.|.|...++.++|+..-++
T Consensus       264 ykCp--lCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~HS~--~~y~C~h~~C~~s~r~~~q~  337 (467)
T KOG3608|consen  264 YKCP--LCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQVHSK--TVYQCEHPDCHYSVRTYTQM  337 (467)
T ss_pred             cccc--ccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHhccc--cceecCCCCCcHHHHHHHHH
Confidence            5566  666666666666666654 5566666666  666666666666666666653  45666664444455566666


Q ss_pred             HHHHHhhC
Q psy11070        136 VKAVANNS  143 (148)
Q Consensus       136 ~~h~~~h~  143 (148)
                      .+|.+-++
T Consensus       338 ~~H~~evh  345 (467)
T KOG3608|consen  338 RRHFLEVH  345 (467)
T ss_pred             HHHHHHhc
Confidence            66655443

>PHA02768 hypothetical protein; Provisional

Probab=98.84  E-value=1.7e-09  Score=57.60  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=37.3

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISF  135 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l  135 (148)
                      .|.|+  .||+.|.+.++|..|+++|+   ++|+|..|++  .|.+.+.|
T Consensus         5 ~y~C~--~CGK~Fs~~~~L~~H~r~H~---k~~kc~~C~k--~f~~~s~l   47 (55)
T PHA02768          5 GYECP--ICGEIYIKRKSMITHLRKHN---TNLKLSNCKR--ISLRTGEY   47 (55)
T ss_pred             ccCcc--hhCCeeccHHHHHHHHHhcC---CcccCCcccc--eeccccee
Confidence            47899  99999999999999999996   5799999998  57666554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.82  E-value=2.7e-09  Score=48.79  Aligned_cols=22  Identities=32%  Similarity=0.819  Sum_probs=16.2

Q ss_pred             HHHHHHHHhcCCCCceeCCCCCC
Q psy11070        103 QYSTHLKEHSNVSAPYMCDYKGV  125 (148)
Q Consensus       103 ~l~~h~~~h~~~~k~~~C~~c~~  125 (148)
                      +|.+|+++|+| ++||.|+.|++
T Consensus         1 ~l~~H~~~H~~-~k~~~C~~C~k   22 (26)
T PF13465_consen    1 NLRRHMRTHTG-EKPYKCPYCGK   22 (26)
T ss_dssp             HHHHHHHHHSS-SSSEEESSSSE
T ss_pred             CHHHHhhhcCC-CCCCCCCCCcC
Confidence            46677777777 77777777776

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.80  E-value=2.4e-08  Score=76.89  Aligned_cols=82  Identities=16%  Similarity=0.272  Sum_probs=65.5

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccc--
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLT--  130 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~--  130 (148)
                      -++.+.|.  .|++.|. ...|..|+..++  +++.|+   |+..+ ....|..|+.+|.+ .+++.|..|+..  |.  
T Consensus       450 l~~H~~C~--~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~--v~~g  517 (567)
T PLN03086        450 AKNHVHCE--KCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDM--VQAG  517 (567)
T ss_pred             cccCccCC--CCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCC-CCceeCCCCCCc--cccC
Confidence            34567899  9999996 677999999874  788997   99755 56899999999999 899999999974  43  


Q ss_pred             --------cHHHHHHHHHhhCCCC
Q psy11070        131 --------LKISFVKAVANNSKYP  146 (148)
Q Consensus       131 --------~~~~l~~h~~~h~~~~  146 (148)
                              ..+.|..|...+...+
T Consensus       518 ~~~~d~~d~~s~Lt~HE~~CG~rt  541 (567)
T PLN03086        518 GSAMDVRDRLRGMSEHESICGSRT  541 (567)
T ss_pred             ccccchhhhhhhHHHHHHhcCCcc
Confidence                    2458999998876554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.67  E-value=2.4e-08  Score=45.60  Aligned_cols=26  Identities=35%  Similarity=0.654  Sum_probs=23.5

Q ss_pred             HHHHHHHHhcCCCceecCcCCcccccCC
Q psy11070         73 NLKMHMVRHGKPLTLCCEELGCGRKFQT  100 (148)
Q Consensus        73 ~l~~h~~~h~~~~~~~c~~~~C~~~f~~  100 (148)
                      +|..||+.|++++||.|+  .|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~--~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCP--YCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEES--SSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCC--CCcCeeCc
Confidence            488999999999999999  99999863

...

>PHA00733 hypothetical protein

Probab=98.61  E-value=1.1e-07  Score=60.34  Aligned_cols=56  Identities=25%  Similarity=0.508  Sum_probs=49.6

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      .+.++|.|.  .|++.|.....|..|++.|  ..++.|.  .|++.|.....|..|+....+
T Consensus        69 ~~~kPy~C~--~Cgk~Fss~s~L~~H~r~h--~~~~~C~--~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCP--LCLMPFSSSVSLKQHIRYT--EHSKVCP--VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCC--CCCCcCCCHHHHHHHHhcC--CcCccCC--CCCCccCCHHHHHHHHHHhcC
Confidence            347899999  9999999999999999976  3579999  999999999999999976544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.59  E-value=1e-07  Score=73.45  Aligned_cols=85  Identities=21%  Similarity=0.266  Sum_probs=66.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccC----------ChHHHHHHHHHhcCCCC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQ----------TMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~----------~~~~l~~h~~~h~~~~k  116 (148)
                      |...+.  +++.|+   |++.+ ....|..|+..|.+.+++.|.  .|+..|.          ....|..|..+. | .+
T Consensus       471 H~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~--fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G-~r  540 (567)
T PLN03086        471 HMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCR--FCGDMVQAGGSAMDVRDRLRGMSEHESIC-G-SR  540 (567)
T ss_pred             HHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCC--CCCCccccCccccchhhhhhhHHHHHHhc-C-Cc
Confidence            444442  678887   99765 568899999999999999999  9999885          235899999986 6 79


Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ++.|..||+  .|..+ .+..|+-..+.
T Consensus       541 t~~C~~Cgk--~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        541 TAPCDSCGR--SVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             ceEccccCC--eeeeh-hHHHHHHHhhc
Confidence            999999998  45444 67788765543

>KOG3993|consensus

Probab=98.35  E-value=1.1e-07  Score=69.93  Aligned_cols=86  Identities=16%  Similarity=0.325  Sum_probs=70.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCC---------------------
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV---------------------  114 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~---------------------  114 (148)
                      .|.|.  .|...|.....|..|...-.-...|.|+  .|+++|+-+.+|..|.|=|.-.                     
T Consensus       267 dyiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  267 DYICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHH--HHHHhhhhHHHHhhccCCeeEEeeecCC--cccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhh
Confidence            49999  9999999999998887643334468999  9999999999999998855410                     


Q ss_pred             -----------CCceeCCCCCCCcccccHHHHHHHHHhhCCCCC
Q psy11070        115 -----------SAPYMCDYKGVCMSLTLKISFVKAVANNSKYPV  147 (148)
Q Consensus       115 -----------~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~~~  147 (148)
                                 +--|.|..|+|  .|++...|++|+-+|.+.+.
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~K--kFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGK--KFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             hhccccCCcccCceeecHHhhh--hhHHHHHHHHhHHhhhcccc
Confidence                       12489999998  79999999999999887543

>PHA00616 hypothetical protein

Probab=98.33  E-value=2.7e-07  Score=46.92  Aligned_cols=31  Identities=23%  Similarity=0.359  Sum_probs=16.4

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |+|+  .||+.|...+.|..|++.|+| ++++.|
T Consensus         2 YqC~--~CG~~F~~~s~l~~H~r~~hg-~~~~~~   32 (44)
T PHA00616          2 YQCL--RCGGIFRKKKEVIEHLLSVHK-QNKLTL   32 (44)
T ss_pred             Cccc--hhhHHHhhHHHHHHHHHHhcC-CCccce
Confidence            4555  555555555555555555555 455444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.29  E-value=3.2e-07  Score=65.38  Aligned_cols=73  Identities=19%  Similarity=0.347  Sum_probs=50.6

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHH-hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccccc
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTL  131 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~  131 (148)
                      ++|||+|+.+.|.|.|+....|+.|+.- |...+...-+.+.--..|            -.. +|||.|++|+|  +++.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~-~KPYrCevC~K--RYKN  410 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAK-DKPYRCEVCDK--RYKN  410 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------ccc-CCceeccccch--hhcc
Confidence            3599999999999999999999999875 543333332210100112            233 79999999998  6888


Q ss_pred             HHHHHHHHH
Q psy11070        132 KISFVKAVA  140 (148)
Q Consensus       132 ~~~l~~h~~  140 (148)
                      .-.|+-|+.
T Consensus       411 lNGLKYHr~  419 (423)
T COG5189         411 LNGLKYHRK  419 (423)
T ss_pred             Cccceeccc
Confidence            878877753

>PHA00616 hypothetical protein

Probab=98.27  E-value=4.8e-07  Score=46.01  Aligned_cols=33  Identities=21%  Similarity=0.417  Sum_probs=31.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      ||.|+  .||+.|.....|..|++.|+|++++.|.
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            58899  9999999999999999999999998876

>PHA00732 hypothetical protein

Probab=98.07  E-value=3.6e-06  Score=48.84  Aligned_cols=48  Identities=27%  Similarity=0.586  Sum_probs=39.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH-hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|++. |.+   +.|.  .|++.|.   .|..|..+..+
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~~---~~C~--~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHTL---TKCP--VCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccCC---CccC--CCCCEeC---ChhhhhcccCC
Confidence            57888  999999999999999984 653   4798  9999998   47788876654

>PHA00732 hypothetical protein

Probab=98.06  E-value=4e-06  Score=48.63  Aligned_cols=46  Identities=17%  Similarity=0.257  Sum_probs=37.1

Q ss_pred             ceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCCCCCCcccccHHHHHHHHHhh
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      ||.|.  .|++.|.+...|..|++ .|.+    +.|+.||+  .|.   .|..|....
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgK--sF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHTL----TKCPVCNK--SYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccCC----CccCCCCC--EeC---Chhhhhccc
Confidence            57899  99999999999999998 4655    58999998  465   477777543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=2e-05  Score=34.59  Aligned_cols=22  Identities=55%  Similarity=1.026  Sum_probs=11.8

Q ss_pred             eeCCCcccccccCChHHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      |.|+  .|++.|.....|..|++.
T Consensus         1 y~C~--~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCP--ICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEET--TTTEEESSHHHHHHHHHH
T ss_pred             CCCC--CCCCccCCHHHHHHHHhH
Confidence            3455  555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.71  E-value=0.00011  Score=39.45  Aligned_cols=50  Identities=18%  Similarity=0.358  Sum_probs=25.2

Q ss_pred             eecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |.|+  .|++ ..+...|..|.. .|..+.+.+.|++|..  .+.  .+|..|+..++
T Consensus         3 f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~--~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVCPICSS--RVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchh--hhh--hHHHHHHHHhc
Confidence            4566  5666 344455666643 3443123466666664  222  25666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.71  E-value=4e-05  Score=33.55  Aligned_cols=22  Identities=23%  Similarity=0.425  Sum_probs=11.9

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      |.|+.|++  .|.....|..|++.
T Consensus         1 y~C~~C~~--~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGK--SFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTE--EESSHHHHHHHHHH
T ss_pred             CCCCCCCC--ccCCHHHHHHHHhH
Confidence            45555554  45555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=97.64  E-value=1.5e-05  Score=59.09  Aligned_cols=27  Identities=7%  Similarity=0.265  Sum_probs=19.0

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      +.-|.|..|--  .|.....|.+|+..++
T Consensus       456 ~q~f~~ky~~a--tfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  456 EQGFTCKYCPA--TFYSSPGLTRHINKCH  482 (500)
T ss_pred             hhccccccchH--hhhcCcchHhHhhhcC
Confidence            34577888875  5777778888876544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.61  E-value=7.6e-05  Score=32.72  Aligned_cols=23  Identities=17%  Similarity=0.338  Sum_probs=13.3

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |.|++|++  .|.+...|..|+..|
T Consensus         1 ~~C~~C~~--~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGK--SFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS---EESSHHHHHHHHHHH
T ss_pred             CCCcCCCC--cCCcHHHHHHHHHhh
Confidence            45666665  566666666666655

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.49  E-value=0.00032  Score=37.66  Aligned_cols=49  Identities=24%  Similarity=0.481  Sum_probs=38.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH-hcCC-CceecCcCCcccccCChHHHHHHHHHh
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR-HGKP-LTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~-~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .|.|+  .|++ ..+...|..|... |..+ +.+.|+  .|...+.  .+|..|+..+
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~CP--iC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVCP--ICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccCC--Cchhhhh--hHHHHHHHHh
Confidence            48899  9999 5667889999775 6654 569999  9998654  4888998754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=7.9e-05  Score=33.96  Aligned_cols=25  Identities=16%  Similarity=0.357  Sum_probs=13.4

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      ||.|..|++  .|.....|..|++.|.
T Consensus         1 ~~~C~~C~~--~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGK--TFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTE--EESSHHHHHHHHCTTT
T ss_pred             CCCCCccCC--ccCChhHHHHHhHHhc
Confidence            355555554  4555555555555443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.27  E-value=0.00035  Score=41.98  Aligned_cols=74  Identities=12%  Similarity=0.270  Sum_probs=20.6

Q ss_pred             eCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHH
Q psy11070         58 SCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVK  137 (148)
Q Consensus        58 ~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~  137 (148)
                      .|.  .|+..|.....|..|+....+...-.      ...+.....+..+.+.-.  ...+.|..|++  .|.....|..
T Consensus         1 ~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~------~~~l~~~~~~~~~~~~~~--~~~~~C~~C~~--~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCL--FCDESFSSVDDLLQHMKKKHGFDIPD------QKYLVDPNRLLNYLRKKV--KESFRCPYCNK--TFRSREALQE   68 (100)
T ss_dssp             ----------------------------------------------------------SSEEBSSSS---EESSHHHHHH
T ss_pred             Ccc--cccccccccccccccccccccccccc------cccccccccccccccccc--CCCCCCCccCC--CCcCHHHHHH
Confidence            377  99999999999999987633321101      112223334444443322  24689999997  5889999999


Q ss_pred             HHHhhC
Q psy11070        138 AVANNS  143 (148)
Q Consensus       138 h~~~h~  143 (148)
                      |++.++
T Consensus        69 Hm~~~~   74 (100)
T PF12756_consen   69 HMRSKH   74 (100)
T ss_dssp             HHHHTT
T ss_pred             HHcCcc
Confidence            998643

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.26  E-value=0.00036  Score=30.45  Aligned_cols=22  Identities=41%  Similarity=0.880  Sum_probs=11.1

Q ss_pred             eeCCCcccccccCChHHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      |.|+  .|++.|.+...|..|+..
T Consensus         1 ~~C~--~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCP--ICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-S--STS-EESSHHHHHHHHHH
T ss_pred             CCCc--CCCCcCCcHHHHHHHHHh
Confidence            3455  555555555555555554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.17  E-value=0.00035  Score=31.74  Aligned_cols=23  Identities=26%  Similarity=0.829  Sum_probs=13.0

Q ss_pred             eecCcCCcccccCChHHHHHHHHHh
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      |.|.  .|++.|.....|..|++.|
T Consensus         2 ~~C~--~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECD--ECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEET--TTTEEESSHHHHHHHHCTT
T ss_pred             CCCC--ccCCccCChhHHHHHhHHh
Confidence            4555  5555555555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=96.92  E-value=0.0012  Score=29.12  Aligned_cols=23  Identities=17%  Similarity=0.309  Sum_probs=13.7

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |.|..|++  .|.....|..|++.|
T Consensus         1 ~~C~~C~~--~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGK--VFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcc--hhCCHHHHHHHHHHh
Confidence            45666665  466666666666644

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.74  E-value=0.0026  Score=33.24  Aligned_cols=28  Identities=18%  Similarity=0.341  Sum_probs=11.4

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +.|..|+  .|+..+.+..+|.+|+..+.+
T Consensus        22 ~~PatCP--~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   22 EQPATCP--ICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             S--EE-T--TT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCC--cchhhccchhhHHHHHHHHhc
Confidence            3444555  555555555555555544433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.67  E-value=0.0018  Score=42.65  Aligned_cols=37  Identities=19%  Similarity=0.362  Sum_probs=30.7

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccc
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSL  129 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f  129 (148)
                      +|.|.   |+.   ....+.+|.++|++ +++|.|..|+..+.|
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g-~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRG-EAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcC-CccEECCCCCceeEE
Confidence            57885   876   67788999999999 999999999985444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.64  E-value=0.0026  Score=27.96  Aligned_cols=19  Identities=47%  Similarity=0.732  Sum_probs=10.5

Q ss_pred             ccccccCChHHHHHHHHHh
Q psy11070         63 NCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        63 ~C~~~f~~~~~l~~h~~~h   81 (148)
                      .|++.|.....|..|++.|
T Consensus         5 ~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        5 ECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCcchhCCHHHHHHHHHHh
Confidence            5555555555555555544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.58  E-value=0.0023  Score=28.12  Aligned_cols=23  Identities=17%  Similarity=0.307  Sum_probs=14.4

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |+|..|+.  ... ...|..|++.++
T Consensus         1 y~C~~C~y--~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSY--STS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS---EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCC--cCC-HHHHHHHHHhhC
Confidence            57777773  445 667777777754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.42  E-value=0.0063  Score=31.84  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=23.5

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCc
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLT   86 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~   86 (148)
                      ..+.|-.|+  .|+..+.+..+|.+|+....+.+|
T Consensus        20 ~S~~PatCP--~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCP--ICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-T--TT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCC--cchhhccchhhHHHHHHHHhcccC
Confidence            356789999  999999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.65  E-value=0.0078  Score=26.56  Aligned_cols=17  Identities=35%  Similarity=0.725  Sum_probs=8.4

Q ss_pred             ccccccCChHHHHHHHH
Q psy11070         63 NCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        63 ~C~~~f~~~~~l~~h~~   79 (148)
                      .|++.|.....|..|++
T Consensus         5 ~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    5 ICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             TTTEEESSHHHHHHHHT
T ss_pred             CCCCCcCCHHHHHHHHC
Confidence            55555555555544443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.49  E-value=0.014  Score=25.67  Aligned_cols=17  Identities=24%  Similarity=0.597  Sum_probs=9.0

Q ss_pred             CcccccCChHHHHHHHH
Q psy11070         93 GCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~  109 (148)
                      .|++.|.....|..|++
T Consensus         5 ~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    5 ICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             TTTEEESSHHHHHHHHT
T ss_pred             CCCCCcCCHHHHHHHHC
Confidence            55555555555555544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.10  E-value=0.027  Score=24.55  Aligned_cols=22  Identities=45%  Similarity=0.925  Sum_probs=11.4

Q ss_pred             eeCCCcccccccCChHHHHHHHHHh
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      |.|.  .|+.... ...|..|++.+
T Consensus         1 y~C~--~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCP--HCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-S--SSS-EES-HHHHHHHHHHH
T ss_pred             CCCC--CCCCcCC-HHHHHHHHHhh
Confidence            4555  6665555 55666665553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.37  E-value=0.0079  Score=45.11  Aligned_cols=67  Identities=21%  Similarity=0.332  Sum_probs=53.6

Q ss_pred             CceeCCCcccccccCChHHHHHHHH--HhcCC--CceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMV--RHGKP--LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG  124 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~--~h~~~--~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~  124 (148)
                      .++.|.  .|...|.....|..|.+  .|+++  +++.|++..|++.|.+...+..|..+|.+ .+++.+..-.
T Consensus       288 ~~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  358 (467)
T COG5048         288 LPIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS-ISPAKEKLLN  358 (467)
T ss_pred             cCCCCc--cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccC-CCcccccccc
Confidence            356777  88888888888888888  78888  88888855588888888888888888888 7777665544

>KOG4173|consensus

Probab=94.21  E-value=0.022  Score=38.76  Aligned_cols=85  Identities=25%  Similarity=0.509  Sum_probs=64.2

Q ss_pred             CceeCCCcccccccCChHHHHHHHHH-hcCCCceecCcCCcccccCChHHHHHHHHH-hc---------CCCCceeCCCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLTLCCEELGCGRKFQTMKQYSTHLKE-HS---------NVSAPYMCDYK  123 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~-h~---------~~~k~~~C~~c  123 (148)
                      +.+.|+...|...|.....+..|..+ |+.    .|.  .|.+.|.+..-|..|+.- |.         | .--|.|-+=
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs--~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG-~dMy~ClvE  150 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCS--FCKRAFPTGHLLDAHILEWHDSLFQALVERG-QDMYQCLVE  150 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc----hhH--HHHHhCCchhhhhHHHHHHHHHHHHHHHHcC-ccHHHHHHH
Confidence            45889988999999888888888765 432    588  899999999999888752 22         2 234788665


Q ss_pred             CCCcccccHHHHHHHHHhhCCCC
Q psy11070        124 GVCMSLTLKISFVKAVANNSKYP  146 (148)
Q Consensus       124 ~~~~~f~~~~~l~~h~~~h~~~~  146 (148)
                      ||+..|++.-..+.|+-.-+++|
T Consensus       151 gCt~KFkT~r~RkdH~I~~Hk~P  173 (253)
T KOG4173|consen  151 GCTEKFKTSRDRKDHMIRMHKYP  173 (253)
T ss_pred             hhhhhhhhhhhhhhHHHHhccCC
Confidence            55567999888999988777766

>PRK04860 hypothetical protein; Provisional

Probab=93.75  E-value=0.047  Score=36.09  Aligned_cols=39  Identities=15%  Similarity=0.363  Sum_probs=31.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMK  102 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~  102 (148)
                      +|.|.   |++   ....+..|.++|+++++|.|.  .|+..|....
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~--~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCR--RCGETLVFKG  157 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECC--CCCceeEEec
Confidence            47775   766   455688999999999999999  9998886543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.09  E-value=0.022  Score=25.72  Aligned_cols=21  Identities=38%  Similarity=0.808  Sum_probs=12.2

Q ss_pred             eeCCCcccccccCChHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      |.|.  .|++.|.....|..|++
T Consensus         2 ~~C~--~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCD--ACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBT--TTTBBBSSHHHHHCCTT
T ss_pred             CCcc--cCCCCcCCHHHHHHHHc
Confidence            4455  66666666666655543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.75  E-value=0.21  Score=22.12  Aligned_cols=20  Identities=30%  Similarity=0.725  Sum_probs=13.5

Q ss_pred             eeCCCcccccccCChHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      ..|+  .||+.| ..+.|..|+.
T Consensus         3 ~~C~--~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCP--ICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCC--CCCCEE-CHHHHHHHHH
Confidence            3577  888888 4556777754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.66  E-value=0.19  Score=23.87  Aligned_cols=22  Identities=23%  Similarity=0.366  Sum_probs=14.7

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHH
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      +|.|..|++  .|.....+..|+.
T Consensus         3 ~~~C~~C~~--~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNV--TFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCC--ccCCHHHHHHHHC
Confidence            466777776  4666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.46  E-value=0.05  Score=40.79  Aligned_cols=57  Identities=18%  Similarity=0.398  Sum_probs=50.4

Q ss_pred             CceecCcCCcccccCChHHHHHHHH--HhcCCC--CceeCC--CCCCCcccccHHHHHHHHHhhCCCC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLK--EHSNVS--APYMCD--YKGVCMSLTLKISFVKAVANNSKYP  146 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~--~h~~~~--k~~~C~--~c~~~~~f~~~~~l~~h~~~h~~~~  146 (148)
                      .++.|.  .|...|.....|..|.+  .|++ +  +++.|.  .|++  .|.+...+..|...|.+..
T Consensus       288 ~~~~~~--~~~~~~s~~~~l~~~~~~~~h~~-~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         288 LPIKSK--QCNISFSRSSPLTRHLRSVNHSG-ESLKPFSCPYSLCGK--LFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             cCCCCc--cccCCcccccccccccccccccc-ccCCceeeeccCCCc--cccccccccCCcccccCCC
Confidence            367788  99999999999999999  8999 8  999999  7997  6999999999988887654

>KOG2893|consensus

Probab=90.23  E-value=0.056  Score=37.75  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=25.3

Q ss_pred             CcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccccc
Q psy11070         93 GCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTL  131 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~  131 (148)
                      .|++.|....-|..|++     .|-|+|-+|-| +.|+.
T Consensus        15 ycnrefddekiliqhqk-----akhfkchichk-kl~sg   47 (341)
T KOG2893|consen   15 YCNREFDDEKILIQHQK-----AKHFKCHICHK-KLFSG   47 (341)
T ss_pred             ecccccchhhhhhhhhh-----hccceeeeehh-hhccC
Confidence            68888988888888776     57788988887 35543

>KOG1146|consensus

Probab=89.69  E-value=0.12  Score=44.18  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=43.8

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHH-hcCCCceecCcCCcccccCChHHHHHHHHHh-cCCCCceeCCCCCCCcc
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLTLCCEELGCGRKFQTMKQYSTHLKEH-SNVSAPYMCDYKGVCMS  128 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h-~~~~k~~~C~~c~~~~~  128 (148)
                      ++-.+.++|+  .|+..|+....|..||+. |.....-.|.|     .-... .+ ....+. .+ -++|.|..|..  .
T Consensus       460 ~S~~kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~~~c~~-----gq~~~-~~-arg~~~~~~-~~p~~C~~C~~--s  527 (1406)
T KOG1146|consen  460 HSFFKTLKCP--KCNWHYKLAQTLGVHMRSKHPESQSAYCKA-----GQNHP-RL-ARGEVYRCP-GKPYPCRACNY--S  527 (1406)
T ss_pred             ecccccccCC--ccchhhhhHHHhhhcccccccccchhHhHh-----ccccc-cc-cccccccCC-CCcccceeeee--e
Confidence            4455677777  888888877778777776 33221111211     00000 00 000111 12 37888998886  6


Q ss_pred             cccHHHHHHHHHh
Q psy11070        129 LTLKISFVKAVAN  141 (148)
Q Consensus       129 f~~~~~l~~h~~~  141 (148)
                      +.....|..|+..
T Consensus       528 tttng~LsihlqS  540 (1406)
T KOG1146|consen  528 TTTNGNLSIHLQS  540 (1406)
T ss_pred             eecchHHHHHHHH
Confidence            7787888888764

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.04  E-value=0.6  Score=27.59  Aligned_cols=24  Identities=38%  Similarity=0.771  Sum_probs=17.3

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHh
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      .+.|.  .|++.|.+...|..||+.+
T Consensus        50 ~~~C~--~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCP--YCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBS--SSS-EESSHHHHHHHHHHT
T ss_pred             CCCCC--ccCCCCcCHHHHHHHHcCc
Confidence            47777  8888888888888887763

>KOG1146|consensus

Probab=87.61  E-value=0.55  Score=40.49  Aligned_cols=22  Identities=5%  Similarity=0.135  Sum_probs=12.8

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHH
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      .+.|.+|+..  -.-.-+|..|+.
T Consensus       589 ~~~C~vc~ye--tniarnlrihmt  610 (1406)
T KOG1146|consen  589 SWRCEVCSYE--TNIARNLRIHMT  610 (1406)
T ss_pred             Ccchhhhcch--hhhhhccccccc
Confidence            3789999853  333335555543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=87.27  E-value=0.38  Score=35.15  Aligned_cols=25  Identities=16%  Similarity=0.295  Sum_probs=13.0

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHH
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      |||+|++.||.+.++..-.|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhh
Confidence            5555555554445555555555544

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.13  E-value=2.1  Score=28.26  Aligned_cols=45  Identities=9%  Similarity=0.197  Sum_probs=32.4

Q ss_pred             cCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHH
Q psy11070         82 GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKA  138 (148)
Q Consensus        82 ~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h  138 (148)
                      .+..-|.|+  .|+..|+...++.          --|.|+.||..+.+...+.+..-
T Consensus       105 ~~~~~Y~Cp--~c~~r~tf~eA~~----------~~F~Cp~Cg~~L~~~dn~~~i~~  149 (158)
T TIGR00373       105 TNNMFFICP--NMCVRFTFNEAME----------LNFTCPRCGAMLDYLDNSEAIEK  149 (158)
T ss_pred             cCCCeEECC--CCCcEeeHHHHHH----------cCCcCCCCCCEeeeccCHHHHHH
Confidence            445669999  9999998888774          23999999986555555554443

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.14  E-value=0.97  Score=22.77  Aligned_cols=26  Identities=12%  Similarity=0.257  Sum_probs=14.6

Q ss_pred             CCceeCCCCCCCcccc--cHHHHHHHHH
Q psy11070        115 SAPYMCDYKGVCMSLT--LKISFVKAVA  140 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~--~~~~l~~h~~  140 (148)
                      .....|..|++.+...  ..+.|..|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            4456788888754453  5567888874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=83.59  E-value=3.3  Score=27.92  Aligned_cols=43  Identities=14%  Similarity=0.294  Sum_probs=29.9

Q ss_pred             CCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHH
Q psy11070         83 KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVK  137 (148)
Q Consensus        83 ~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~  137 (148)
                      ...-|.|+  .|+..|....++.          --|.|+.||..+.+-..+.+..
T Consensus       114 ~~~~Y~Cp--~C~~rytf~eA~~----------~~F~Cp~Cg~~L~~~dn~~~~~  156 (178)
T PRK06266        114 NNMFFFCP--NCHIRFTFDEAME----------YGFRCPQCGEMLEEYDNSELIK  156 (178)
T ss_pred             CCCEEECC--CCCcEEeHHHHhh----------cCCcCCCCCCCCeecccHHHHH
Confidence            44568999  8999888887652          2499999997655544444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	148
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		7e-04

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 54  QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN 113
           ++ ++CP+++C++RF+  SNL  H+  H       C    C R F      +TH++ H+ 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTG 59
Query: 114 VSAPYMCDYKG 124
              P+ CD  G
Sbjct: 60  -EKPFACDICG 69

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 36  GINKEYFISSTGGKNSKK---QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEEL 92
           G NK YF  S    +S+K   ++ + C  K+C +RF+    LK H  RH       C+  
Sbjct: 13  GCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK-- 70
Query: 93  GCGRKFQTMKQYSTHLKEHSNVSAPYMCDY 122
            C RKF       TH + H+    P+ C +
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTG-EKPFSCRW 99

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 59  CPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL-KEHSNVSAP 117
           C  + C K ++ L NLK H+  H       CE  GC + F      + H  + HSN   P
Sbjct: 70  CTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-EKP 128
Query: 118 YMCDYKGVCMSLTLKISFVKAV 139
           Y+C   G     T   S  K V
Sbjct: 129 YVCKLPGCTKRYTDPSSLRKHV 150

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 54  QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN 113
           ++ ++CP+++C++RF+  ++L  H+  H       C    C R F      +TH++ H+ 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTG 59
Query: 114 VSAPYMCDYKG 124
              P+ CD  G
Sbjct: 60  -EKPFACDICG 69

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 43  ISSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHG--KPLTLCCEELGCGRKFQT 100
           ++ TG KN      ++C    C+ RFTT +N+K H  R    K     C    CG+ F+ 
Sbjct: 65  LTHTGEKN------FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKK 118
Query: 101 MKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYP 146
             Q   H   H+    PY C ++G     +L     +    ++ YP
Sbjct: 119 HNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 163

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	5e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-04

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 44  SSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTM 101
           S + G + +K+++  C    C K +T  S+LK H+  H G KP    C   GC  +F   
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYK--CTWEGCDWRFARS 60

Query: 102 KQYSTHLKEHSNVSAPYMCD 121
            + + H ++H+    P+ C 
Sbjct: 61  DELTRHYRKHTGAK-PFQCG 79

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.1 bits (120), Expect = 2e-09
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 44  SSTGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHG--KPLTLCCEELGCGRKFQTM 101
           SS    +S + +   C    C K +   S+LK H   H   KP +  C   GC R+F   
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS--CSWKGCERRFARS 62

Query: 102 KQYSTHLKEH 111
            + S H + H
Sbjct: 63  DELSRHRRTH 72

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSN--- 113
           C  + C K ++ L NLK H+  H G KP    CE  GC + F      ++   +H N   
Sbjct: 70  CTFEGCRKSYSRLENLKTHLRSHTGEKPYM--CEHEGCSKAFSN----ASDRAKHQNRTH 123

Query: 114 -VSAPYMCDYKG 124
               PY+C   G
Sbjct: 124 SNEKPYVCKLPG 135

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 9/56 (16%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVR-H-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C  + C+K F+  S+   H  R H   KP    C+  GC +++       + L++H
Sbjct: 100 CEHEGCSKAFSNASDRAKHQNRTHSNEKPYV--CKLPGCTKRY----TDPSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 11/74 (14%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRHG-----KPLTLCCEELGCGRKFQTMKQYSTHLKEHSN 113
           C    C++ F +   L  H+         K     C   GC R+ +  K     L  H  
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFV--CHWGGCSRELRPFKAQY-MLVVHMR 60

Query: 114 VSA---PYMCDYKG 124
                 P+ C ++G
Sbjct: 61  RHTGEKPHKCTFEG 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 59  CPIKNCNKRFTTLSNLKMHM-VRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV- 114
           C    C + F+    L  H   +H   K  +  C E  CG+ F     +  HLKEH  + 
Sbjct: 10  CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS--CPEPACGKSF----NFKKHLKEHMKLH 63

Query: 115 --SAPYMCDYKG 124
             +  Y+C++ G
Sbjct: 64  SDTRDYICEFSG 75

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 11/68 (16%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV-- 114
           CP   C K F    NLK+H   H G KP    CE  GC R+F      S+  K+H +V  
Sbjct: 93  CPFPGCGKIFARSENLKIHKRTHTGEKPFK--CEFEGCDRRFAN----SSDRKKHMHVHT 146

Query: 115 -SAPYMCD 121
                   
Sbjct: 147 SDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH--GKP--LTLCCEELGCGRKFQTMKQYSTHLKEH 111
            P K+C++ F+T+  L  H+     G P      C    C R+ ++ K     L  H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA-KYKLVNH 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 116
           C  +NC K F   + LK+H   H    P    C   GC ++F    +   H K H+    
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYE--CPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 117 --PYMCDYKGVCMSLTLK 132
                C + G   +L LK
Sbjct: 62  KKDDSCSFVGKTWTLYLK 79

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 116
           C    C K +T  S+LK H+  H G KP    C+  GCG KF    + + H ++H+    
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYH--CDWDGCGWKFARSDELTRHYRKHTGHR- 64

Query: 117 PYMCD 121
           P+ C 
Sbjct: 65  PFQCQ 69

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 9/54 (16%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRHG-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           CP K C K F   S ++ H+  HG +     C E  CG+ F      S+ LK H
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTHGPRVHV--CAE--CGKAF----VESSKLKRH 53

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C  + C KRF+   NL+ H+  H G +P    C   GC +KF      ST+LK H
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYV--CPFDGCNKKF----AQSTNLKSH 113

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 11/72 (15%)

Query: 58  SCPIKNCNKRFTTLSNLKMHMVRHG-----KPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
            C I  C       ++L  H  +H            CE   CG++F+     + H  +  
Sbjct: 9   QCEI--CGFTCRQKASLNWHQRKHAETVAALRFP--CEF--CGKRFEKPDSVAAHRSKSH 62

Query: 113 NVSAPYMCDYKG 124
                   +  G
Sbjct: 63  PALLLAPQESSG 74

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C  K+C +RF+    LK H  RH G KP    C+   C RKF      S HLK H
Sbjct: 39  CDFKDCERRFSRSDQLKRHQRRHTGVKPFQ--CKT--CQRKFSR----SDHLKTH 85

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C    CNKR+  LS+L+MH  +H G KP    C+   C R+F      S  LK H
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGEKPYQ--CDFKDCERRFSR----SDQLKRH 57

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 8/50 (16%)

Query: 64  CNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C ++F+   +LK H   H G KP +  C    C +KF      S  L  H
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGEKPFS--CRWPSCQKKFAR----SDELVRH 115

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 12/52 (23%)

Query: 64  CNKRFTTLSNLKMHMVRH----GKPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C+ RFT    +KMH+++            C    C           + L  H
Sbjct: 21  CHARFTQSGTMKMHILQKHTENVAKFH--CPH--CDTVIAR----KSDLGVH 64

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 10/55 (18%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           CP+++C++RF+   +L  H+  H G KP    C    C R F      S HL  H
Sbjct: 7   CPVESCDRRFSQSGSLTRHIRIHTGQKPFQ--CRI--CMRNF----SRSDHLTTH 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 10/50 (20%)

Query: 64  CNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C + F+   +L  H+  H G KP    C+   CGRKF      S   K H
Sbjct: 40  CMRNFSRSDHLTTHIRTHTGEKPFA--CDI--CGRKFAR----SDERKRH 81

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 13/72 (18%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV-- 114
           C  + C K FT+L +L  H + H G K  T  C+  GC  +F T      ++K+H N   
Sbjct: 45  CKEEGCEKGFTSLHHLTRHSLTHTGEKNFT--CDSDGCDLRFTT----KANMKKHFNRFH 98

Query: 115 ---SAPYMCDYK 123
                 Y+C ++
Sbjct: 99  NIKICVYVCHFE 110

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 59  CPIKNCNKRFTTLSNLKMHMVRH--GKPLTLCCEELGCGRKFQTMKQYSTHLKEHS 112
           CP+++C++RF+    L  H+  H   KP    C    C R F      +TH++ H+
Sbjct: 22  CPVESCDRRFSRSDELTRHIRIHTGQKPFQ--CRI--CMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 35.7 bits (83), Expect = 6e-04
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 67  RFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD 121
               ++NL  ++V   +P    C    C R+F    + + H++ H+    P+ C 
Sbjct: 2   EPHPMNNLLNYVVPKMRPYA--CPVESCDRRFSRSDELTRHIRIHTGQK-PFQCR 53

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 8/69 (11%)

Query: 59  CPIKNCNKRFTTLSNLKMHM----VRHGKPLTLCCEELGCGRKFQTMKQYS---THLKEH 111
            P K+C++ F+T+  L  H+    V   +     C    C R+ ++ K       H++ H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 112 SNVSAPYMC 120
           +        
Sbjct: 86  TG-EKSGPS 93

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 56 LWSCPIKNCNKRFTTLSNLKMHMVRH 81
           + C    C K F    N++ H+  H
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.0 bits (81), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRH 81
          +  K++   C I+ C K +   S+L+ H+  H
Sbjct: 2  DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWH 33

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 12/52 (23%)

Query: 64  CNKRFTTLSNLKMHMVRHG----KPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C++ +T +SN   H V       K     C    C ++F        ++  H
Sbjct: 16  CSRVYTHISNFCRHYVTSHKRNVKVYP--CPF--CFKEFTR----KDNMTAH 59

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 64  CNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV--SAPYM 119
           C + F+   +L  H+  H G KP    C+   CGRKF      S   K H ++    P +
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFA--CDI--CGRKFAR----SDERKRHRDIQHILPIL 60

Query: 120 CD 121
            D
Sbjct: 61  ED 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.86
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.85
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.84
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.83
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.82
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.8
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.75
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.71
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.7
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.69
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.68
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.66
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.61
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.57
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.56
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.55
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.55
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.55
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.54
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.51
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.5
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.49
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.46
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.42
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.41
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.41
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.38
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.37
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.36
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.32
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.29
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.28
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.26
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.23
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.21
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.2
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.19
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.18
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.15
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.15
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.12
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.09
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.09
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.09
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.08
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.95
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.9
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.88
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.87
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.87
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.84
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.81
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.79
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.78
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.78
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.74
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.7
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.7
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.63
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.61
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.58
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.57
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.55
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.51
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.49
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.47
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.47
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.45
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.44
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.43
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.41
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.38
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.36
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.31
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.31
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.3
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.3
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.24
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.24
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.21
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.52
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.45
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.11
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.1
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.06
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.06
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.03
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.23
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.78
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.36
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.17
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.12
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.12
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.91
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.87
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.31
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	88.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.11

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=8.9e-25  Score=139.31  Aligned_cols=91  Identities=16%  Similarity=0.257  Sum_probs=87.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVC  126 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~  126 (148)
                      +..+|.|+++|.|.  .|+++|.....|..|+++|++++||.|.  .|++.|.+...|..|+++|++ ++||.|.+||+ 
T Consensus        13 ~~~~h~Gek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k-   86 (133)
T 2lt7_A           13 YELIVDGRVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEIHHTG-ERRYQCLACGK-   86 (133)
T ss_dssp             EEEEETTEEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHHHHHT-CCCEEESSSCC-
T ss_pred             ceeecCCCcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhccccCC-CccccCCCCCC-
Confidence            56788999999999  9999999999999999999999999999  999999999999999999999 99999999998 


Q ss_pred             cccccHHHHHHHHHhhCC
Q psy11070        127 MSLTLKISFVKAVANNSK  144 (148)
Q Consensus       127 ~~f~~~~~l~~h~~~h~~  144 (148)
                       .|...+.|..|+++|++
T Consensus        87 -~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           87 -SFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             -EESSHHHHHHHHHHHTC
T ss_pred             -CcCCHHHHHHHhHHhcC
Confidence             69999999999999874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=3.2e-23  Score=129.16  Aligned_cols=102  Identities=26%  Similarity=0.523  Sum_probs=95.2

Q ss_pred             CCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         36 GINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        36 ~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      +|++.|.....   |++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+
T Consensus        13 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~   90 (119)
T 2jp9_A           13 GCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTHTRTHT   90 (119)
T ss_dssp             TSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHH
T ss_pred             CCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHHHHHHHHHhc
Confidence            58998887765   88899999999999667999999999999999999999999999  99999999999999999999


Q ss_pred             CCCCceeC--CCCCCCcccccHHHHHHHHHhh
Q psy11070        113 NVSAPYMC--DYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       113 ~~~k~~~C--~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      + +++|.|  +.||+  .|.....|..|+++|
T Consensus        91 ~-~~~~~C~~~~C~~--~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           91 G-EKPFSCRWPSCQK--KFARSDELVRHHNMH  119 (119)
T ss_dssp             T-CCCEECCSTTCCC--EESSHHHHHHHHHTC
T ss_pred             C-CCCeeCCCCCCcc--ccCCHHHHHHHHhcC
Confidence            9 999999  89998  799999999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=3.7e-22  Score=118.57  Aligned_cols=88  Identities=22%  Similarity=0.520  Sum_probs=81.4

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccH
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLK  132 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~  132 (148)
                      ++++|.|.++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|..|++  .|...
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~   75 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR--KFARS   75 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHC-CCCEECTTTCC--EESSH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHHHcCC-CCCccCCCCCc--hhCCH
Confidence            46889998667999999999999999999999999999  999999999999999999999 99999999998  79999


Q ss_pred             HHHHHHHHhhCCC
Q psy11070        133 ISFVKAVANNSKY  145 (148)
Q Consensus       133 ~~l~~h~~~h~~~  145 (148)
                      +.|..|+++|++.
T Consensus        76 ~~l~~H~~~H~~~   88 (90)
T 1a1h_A           76 DERKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHHHGGGGC-
T ss_pred             HHHHHHHHHhccc
Confidence            9999999999863

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.86  E-value=1.7e-22  Score=135.58  Aligned_cols=105  Identities=21%  Similarity=0.461  Sum_probs=67.7

Q ss_pred             hcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHH
Q psy11070         33 QSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        33 ~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      .+..|++.|.....   |++.|.++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|++
T Consensus        79 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~  154 (190)
T 2i13_A           79 KCPECGKSFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQR  154 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHH
T ss_pred             cCcccCCccCCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeECC--CCCcccCCHHHHHHHHH
Confidence            34445555554433   55556666666666  6666666666666666666666667776  67777777777777777


Q ss_pred             HhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        110 EHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       110 ~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +|.+ +++|.|.+|++  .|.....|..|+++|++
T Consensus       155 ~H~~-~~~~~C~~C~~--~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          155 THTG-EKPYKCPECGK--SFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             HHHC-CCCEECTTTCC--EESSHHHHHHHHTTC--
T ss_pred             hcCC-CCCeECCCCCC--ccCCHHHHHHHHHhcCC
Confidence            7776 67777777775  56667777777766664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=5.3e-22  Score=124.36  Aligned_cols=109  Identities=17%  Similarity=0.359  Sum_probs=97.9

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHH---hcCCCceecCcCCcccccCChHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVR---HGKPLTLCCEELGCGRKFQTMKQY  104 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~---h~~~~~~~c~~~~C~~~f~~~~~l  104 (148)
                      .+.+..|++.|.....   |++.|.++++|.|.  .|++.|.....|..|+..   +.++++|.|.  .|++.|.....|
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l   82 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMEL   82 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESSHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCCHHHH
Confidence            3567789998887754   88899999999999  999999999999999996   5788999999  999999999999


Q ss_pred             HHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHH-hhCCCC
Q psy11070        105 STHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVA-NNSKYP  146 (148)
Q Consensus       105 ~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~-~h~~~~  146 (148)
                      ..|+++|.+ ++||.|.+|++  .|.....|..|++ .|.+..
T Consensus        83 ~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTG-EMPYKCSSCSQ--QFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSS-SCSEECSSSCC--EESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCC-CCCccCCCccc--hhCCHHHHHHHHHHHCCCCC
Confidence            999999999 99999999998  7999999999998 466543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.5e-21  Score=117.30  Aligned_cols=89  Identities=20%  Similarity=0.331  Sum_probs=84.3

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccc
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSL  129 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f  129 (148)
                      ++.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|++  .|
T Consensus         2 s~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f   74 (96)
T 2dmd_A            2 SSGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSD-ERPFKCQICPY--AS   74 (96)
T ss_dssp             CCCCCCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCC-CCCEECSSSSC--EE
T ss_pred             CCCCCcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCC-CCCccCCCCCC--cc
Confidence            35678999999  9999999999999999999999999999  999999999999999999999 99999999998  79


Q ss_pred             ccHHHHHHHHHhhCCC
Q psy11070        130 TLKISFVKAVANNSKY  145 (148)
Q Consensus       130 ~~~~~l~~h~~~h~~~  145 (148)
                      .....|..|+++|++.
T Consensus        75 ~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           75 RNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             SSHHHHHHHHTTCCSC
T ss_pred             CCHHHHHHHHHHhcCC
Confidence            9999999999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=2.8e-22  Score=125.83  Aligned_cols=104  Identities=23%  Similarity=0.418  Sum_probs=93.6

Q ss_pred             CCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         36 GINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        36 ~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      .|++.|.....   |+++| ++++|.|.  .|++.|.....|..|++.|.++++|.|....|++.|.....|..|+++|.
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   88 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   88 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECT--TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            79998887755   78888 88999999  99999999999999999999999999972249999999999999999999


Q ss_pred             CCCCceeCC--CCCCCcccccHHHHHHHHHhhCCC
Q psy11070        113 NVSAPYMCD--YKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       113 ~~~k~~~C~--~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      + +++|.|.  .|++  .|.+.+.|..|+++|++.
T Consensus        89 ~-~~~~~C~~~~C~~--~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           89 G-DRPYVCPFDGCNK--KFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             C-CCCCCCCSTTCCC--CCSSTTTTHHHHHHHC--
T ss_pred             C-CCceECCCCCCCC--ccCCHHHHHHHHHHHccc
Confidence            9 9999995  5998  699999999999999864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.86  E-value=4.6e-21  Score=115.92  Aligned_cols=90  Identities=21%  Similarity=0.454  Sum_probs=82.7

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccccc
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTL  131 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~  131 (148)
                      ..+++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.+ +++|.|.+|++  .|..
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~   87 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNR--SFSR   87 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS-CCSCBCSSSCC--BCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCcC--ccCC
Confidence            34678999966699999999999999999999999999633699999999999999999999 99999999998  6999


Q ss_pred             HHHHHHHHHhhCC
Q psy11070        132 KISFVKAVANNSK  144 (148)
Q Consensus       132 ~~~l~~h~~~h~~  144 (148)
                      ...|..|+++|.+
T Consensus        88 ~~~l~~H~~~H~~  100 (100)
T 2ebt_A           88 SDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999975

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.85  E-value=3.3e-21  Score=112.44  Aligned_cols=82  Identities=21%  Similarity=0.479  Sum_probs=78.3

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISF  135 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l  135 (148)
                      ||.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|..|++  .|...+.|
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTG-EKPHKCQVCGK--AFSQSSNL   73 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHHHHHT-CCCEECTTTSC--EESSHHHH
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHHHhcC-CCCCcCCCcch--hhCChHHH
Confidence            58999  9999999999999999999999999999  999999999999999999999 99999999998  79999999


Q ss_pred             HHHHHhhCC
Q psy11070        136 VKAVANNSK  144 (148)
Q Consensus       136 ~~h~~~h~~  144 (148)
                      ..|+++|+|
T Consensus        74 ~~H~~~H~g   82 (82)
T 2kmk_A           74 ITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhCC
Confidence            999999975

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=7.3e-22  Score=128.36  Aligned_cols=103  Identities=23%  Similarity=0.413  Sum_probs=92.3

Q ss_pred             CCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCC--cccccCChHHHHHHH-HH
Q psy11070         37 INKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELG--CGRKFQTMKQYSTHL-KE  110 (148)
Q Consensus        37 ~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~--C~~~f~~~~~l~~h~-~~  110 (148)
                      |++.|.....   |++.|.++++|.|.++.|++.|.....|..|++.|+++++|.|.  .  |++.|.....|..|+ ++
T Consensus        45 c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           45 ELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE--HEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECC--STTCCCEESSSSTTHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCC--CCCCCCccCCHHHHHHHHHHh
Confidence            3477776544   88899999999998445999999999999999999999999999  7  999999999999998 89


Q ss_pred             hcCCCCceeCCC--CCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDY--KGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |++ +++|.|.+  |++  .|...+.|..|+++|+|
T Consensus       123 H~~-~~~~~C~~~~C~~--~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HSN-EKPYVCKLPGCTK--RYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCS-CCCEECCSTTTCC--EESSHHHHHHHHHHSCC
T ss_pred             cCC-CCCeeCCCCCCcc--ccCCHHHHHHHHHhhcC
Confidence            999 99999998  997  79999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=8.2e-21  Score=113.83  Aligned_cols=89  Identities=22%  Similarity=0.427  Sum_probs=83.1

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCC--CceeCCCCCCCccc
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVS--APYMCDYKGVCMSL  129 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~--k~~~C~~c~~~~~f  129 (148)
                      +++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +  ++|.|.+|++  .|
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~~~C~~C~~--~f   75 (95)
T 2yt9_A            3 SGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDG-SVGKPYICQSCGK--GF   75 (95)
T ss_dssp             CCCSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHHHHCC-CCCSSBCCSSSCC--CB
T ss_pred             CCCCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhcC-CCCCceECCCccc--hh
Confidence            578899999  9999999999999999999999999999  999999999999999999998 7  8999999998  69


Q ss_pred             ccHHHHHHHHH-hhCCCCC
Q psy11070        130 TLKISFVKAVA-NNSKYPV  147 (148)
Q Consensus       130 ~~~~~l~~h~~-~h~~~~~  147 (148)
                      .....|..|++ .|.+.+-
T Consensus        76 ~~~~~L~~H~~~~H~~~~s   94 (95)
T 2yt9_A           76 SRPDHLNGHIKQVHSGPSS   94 (95)
T ss_dssp             SSHHHHHHHHHHTSCCCSC
T ss_pred             CCHHHHHHHHHHhcCCCCC
Confidence            99999999986 7877653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=1.6e-20  Score=114.79  Aligned_cols=89  Identities=21%  Similarity=0.390  Sum_probs=83.6

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccc
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSL  129 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f  129 (148)
                      ...++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|++  .|
T Consensus        11 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f   83 (106)
T 2ee8_A           11 PSKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSK-EKPFKCQECGK--GF   83 (106)
T ss_dssp             CCCCCCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCC-CCTTSCSSSCC--CC
T ss_pred             CcCCCcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCC-CCCeECCCcCC--cc
Confidence            34567889999  9999999999999999999999999999  999999999999999999999 99999999998  69


Q ss_pred             ccHHHHHHHHHhhCCC
Q psy11070        130 TLKISFVKAVANNSKY  145 (148)
Q Consensus       130 ~~~~~l~~h~~~h~~~  145 (148)
                      .....|..|+++|.+.
T Consensus        84 ~~~~~L~~H~~~H~~~   99 (106)
T 2ee8_A           84 CQSRTLAVHKTLHMQT   99 (106)
T ss_dssp             SSHHHHHHHHHHTTSC
T ss_pred             cCHHHHHHHHHHhCCC
Confidence            9999999999999864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=2.3e-21  Score=126.13  Aligned_cols=111  Identities=15%  Similarity=0.243  Sum_probs=97.6

Q ss_pred             hhhhcCCCCcceeeccC---CCcc-CCCCCc--------eeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccc
Q psy11070         30 EALQSLGINKEYFISST---GGKN-SKKQQL--------WSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRK   97 (148)
Q Consensus        30 ~~~~~~~~~~~~~~~~~---~~~~-h~~~k~--------~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~   97 (148)
                      ..+.+..|++.|.....   |++. |.+.++        |.|.  .|++.|.....|..|++.|.++++|.|.+..|++.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            34677889999988765   7776 777654        7899  99999999999999999999999999992229999


Q ss_pred             cCChHHHHHHHHHhcCCCCceeCCC--CCCCcccccHHHHHHHHHhhCCC
Q psy11070         98 FQTMKQYSTHLKEHSNVSAPYMCDY--KGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        98 f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      |.....|..|+++|++ +++|.|..  |++  .|.....|..|+++|++.
T Consensus       102 f~~~~~L~~H~~~h~~-~~~~~C~~~~C~k--~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          102 FARSENLKIHKRTHTG-EKPFKCEFEGCDR--RFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             ESCHHHHHHHHTTTCS-SCSBCCSSTTCCC--CBSSHHHHHHSSTTTTSC
T ss_pred             cCCHHHHHHHHHhhCC-CCCccCCCCCCCC--ccCCHHHHHHHHHHhcCC
Confidence            9999999999999999 99999997  997  699999999999999864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.84  E-value=7.8e-21  Score=127.50  Aligned_cols=106  Identities=20%  Similarity=0.416  Sum_probs=51.3

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH  107 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h  107 (148)
                      .+.+..|++.|.....   |++.|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H   96 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLRAH   96 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---CCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCCCCccCC--CcCchhCCHHHHHHHHHhcCCCCCccCc--ccCCccCCHHHHHHH
Confidence            3445556665555433   55556555666666  6666666555566665555555555555  555555555555555


Q ss_pred             HHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        108 LKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       108 ~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      +++|.+ +++|.|..|++  .|.....|..|+++|+
T Consensus        97 ~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~~~h~  129 (190)
T 2i13_A           97 QRTHTG-EKPYACPECGK--SFSQLAHLRAHQRTHT  129 (190)
T ss_dssp             HHHHHT-CCCEECTTTCC--EESSHHHHHHHHHHHH
T ss_pred             HHhcCC-CCCCcCCCCCC--ccCCHHHHHHHHHHhC
Confidence            555555 55555555554  3555555555555444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=2.9e-21  Score=119.80  Aligned_cols=93  Identities=15%  Similarity=0.229  Sum_probs=85.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHH--hcCCCcee-cCcCCccccc--CChHHHHHHHHHhcCCCCceeC
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVR--HGKPLTLC-CEELGCGRKF--QTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~--h~~~~~~~-c~~~~C~~~f--~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.  |.+.+++. |.  .|++.|  .....|..|+++|++ ++||.|
T Consensus         9 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~--~C~~~f~f~~~~~l~~H~~~H~~-~~~~~C   83 (115)
T 2dmi_A            9 LYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDN--NNPKRWSKPRKRSLLEMEGKEDA-QKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCC--CCCSCCSSCCCCCCCCCCCSCCC-CSSCBC
T ss_pred             hheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCC--CCCcccccccHHHHHHHhhccCC-CcceEC
Confidence            488999999999999  999999999999999998  77777654 99  999999  899999999999999 999999


Q ss_pred             CCCCCCcccccHHHHHHHHHhhCCC
Q psy11070        121 DYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       121 ~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      .+|++  .|...+.|..|++.|+..
T Consensus        84 ~~C~k--~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           84 MYCGH--SFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SSSCC--BCSSHHHHHHHHHHTTTT
T ss_pred             CCCCC--ccCCHHHHHHHHHHhCCc
Confidence            99998  699999999999997743

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.6e-20  Score=114.61  Aligned_cols=88  Identities=30%  Similarity=0.528  Sum_probs=83.1

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcc
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMS  128 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~  128 (148)
                      ..|+++++|.|   .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|++  .
T Consensus         3 ~~h~~~k~~~C---~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~   74 (110)
T 2csh_A            3 SGSSGDKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTG-IKPYECNICAK--R   74 (110)
T ss_dssp             CCCCCCCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTTCC-CCCEECSSSCC--E
T ss_pred             CCCCCCCCEec---cCCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHHHcCC-CCCeeCCCCcc--h
Confidence            46889999999   3999999999999999999999999999  999999999999999999999 99999999998  7


Q ss_pred             cccHHHHHHHHHhhCC
Q psy11070        129 LTLKISFVKAVANNSK  144 (148)
Q Consensus       129 f~~~~~l~~h~~~h~~  144 (148)
                      |.....|..|++.|++
T Consensus        75 f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           75 FMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             ESCHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHccc
Confidence            9999999999998864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=4.9e-20  Score=114.61  Aligned_cols=91  Identities=22%  Similarity=0.454  Sum_probs=83.8

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCccccc
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTL  131 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~  131 (148)
                      +++++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.+ +++|.|.+|++  .|..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQR--KFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-CCCEECTTTCC--EESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-CCCccCCccCc--hhCC
Confidence            56889999944599999999999999999999999999854599999999999999999999 99999999998  7999


Q ss_pred             HHHHHHHHHhhCCC
Q psy11070        132 KISFVKAVANNSKY  145 (148)
Q Consensus       132 ~~~l~~h~~~h~~~  145 (148)
                      ...|..|+++|++.
T Consensus        79 ~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           79 SDHLKTHTRTHTGE   92 (119)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999999764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.2e-20  Score=114.45  Aligned_cols=91  Identities=14%  Similarity=0.241  Sum_probs=83.9

Q ss_pred             cCCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCC
Q psy11070         45 STGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG  124 (148)
Q Consensus        45 ~~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~  124 (148)
                      +.+++.|.++++|.|.  .|++.|.....|..|++.|.  ++|.|.  .|++.|.....|..|++ |++ +++|.|.+|+
T Consensus         5 ss~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~--~~~~C~--~C~~~f~~~~~l~~H~~-H~~-~~~~~C~~C~   76 (107)
T 1wjp_A            5 SSGASPVENKEVYQCR--LCNAKLSSLLEQGSHERLCR--NAAVCP--YCSLRFFSPELKQEHES-KCE-YKKLTCLECM   76 (107)
T ss_dssp             CCCCCCCCCCCCCBCT--TTCCBCSSHHHHHHHHHHHH--HSBCCT--TTCCCBSSHHHHHHHHH-HCS-TGGGEEGGGT
T ss_pred             cccCcccCCCcCeECC--CCCCccCCHHHHHHHHHHCC--CCccCC--CCCCccCCHHHHHHHHH-cCC-CCCccCcccc
Confidence            3478899999999999  99999999999999999994  789999  99999999999999996 999 9999999999


Q ss_pred             CCcccccHHHHHHHHH-hhCCC
Q psy11070        125 VCMSLTLKISFVKAVA-NNSKY  145 (148)
Q Consensus       125 ~~~~f~~~~~l~~h~~-~h~~~  145 (148)
                      +  .|.....|..|++ .|.+.
T Consensus        77 ~--~f~~~~~L~~H~~~~H~~~   96 (107)
T 1wjp_A           77 R--TFKSSFSIWRHQVEVHNQN   96 (107)
T ss_dssp             E--ECSSHHHHHHHHHHTSCCC
T ss_pred             c--hhCCHHHHHHHHHHHcCCC
Confidence            8  7999999999997 77654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.82  E-value=1.4e-20  Score=126.20  Aligned_cols=108  Identities=23%  Similarity=0.412  Sum_probs=94.7

Q ss_pred             hhc--CCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHH-HHh-cCCCceec--CcCCcccccCChH
Q psy11070         32 LQS--LGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHM-VRH-GKPLTLCC--EELGCGRKFQTMK  102 (148)
Q Consensus        32 ~~~--~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~-~~h-~~~~~~~c--~~~~C~~~f~~~~  102 (148)
                      +.+  ..|++.|.....   |+++|.++++|.|..+.|++.|.....|..|+ +.| .+.++|.|  .  .|++.|....
T Consensus        43 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~--~C~k~f~~~~  120 (190)
T 1tf6_A           43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE--NCGKAFKKHN  120 (190)
T ss_dssp             SCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSS--SSCEECSSHH
T ss_pred             ccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCC--CCccccCCHH
Confidence            455  678888877765   88899999999998777999999999999999 557 46788999  7  8999999999


Q ss_pred             HHHHHHHHhcCCCCceeCCC--CCCCcccccHHHHHHHHHhhCC
Q psy11070        103 QYSTHLKEHSNVSAPYMCDY--KGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       103 ~l~~h~~~h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      .|..|+++|++ ++||.|..  |++  .|...+.|..|+++|++
T Consensus       121 ~L~~H~~~H~~-~~~~~C~~~~C~k--~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          121 QLKVHQFSHTQ-QLPYECPHEGCDK--RFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHGGGSS-SCSSBCCSSSCCC--BCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHhCC-CCCccCCCCCCCc--hhcCHHHHHHHHHHhCC
Confidence            99999999999 99999988  997  69999999999999887

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.82  E-value=3e-20  Score=109.99  Aligned_cols=87  Identities=22%  Similarity=0.457  Sum_probs=79.7

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHH
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKI  133 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~  133 (148)
                      .++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.+ +++|.|..|++  .|...+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-HRPFQCQKCDR--AFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-CCCEECSSSSC--EESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCc--ccCCHH
Confidence            467999944499999999999999999999999999733699999999999999999999 99999999998  799999


Q ss_pred             HHHHHHHhhC
Q psy11070        134 SFVKAVANNS  143 (148)
Q Consensus       134 ~l~~h~~~h~  143 (148)
                      .|..|+++|.
T Consensus        80 ~l~~H~~~H~   89 (89)
T 2wbs_A           80 HLALHMKRHF   89 (89)
T ss_dssp             HHHHHGGGGC
T ss_pred             HHHHHHHhhC
Confidence            9999999873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=4.9e-20  Score=101.46  Aligned_cols=58  Identities=17%  Similarity=0.352  Sum_probs=32.5

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCCC
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYP  146 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~~  146 (148)
                      |+||.|.  .|++.|.....|..|+++|+| ++||.|.+||+  .|.+.+.|..|+++|++.|
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~C~k--~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLG-YRPRSCPECGK--CFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHT-CCCEECTTTCC--EESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCC-CcCeECCCCCC--CcCCHHHHHHHhCccCCCC
Confidence            4555555  555555555555555555555 55555555555  4555555555555555543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=2.3e-20  Score=118.86  Aligned_cols=93  Identities=16%  Similarity=0.245  Sum_probs=84.9

Q ss_pred             HhhhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHH
Q psy11070         29 TEALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYS  105 (148)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~  105 (148)
                      ...+.+..|++.|.....   |+++|+++++|.|.  .|+++|.....|..|+++|++++||.|.  .|++.|.....|.
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~   95 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEIHHTGERRYQCL--ACGKSFINYQFMS   95 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHHHHHTCCCEEES--SSCCEESSHHHHH
T ss_pred             CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhccccCCCccccCC--CCCCCcCCHHHHH
Confidence            345778889999988876   89999999999999  9999999999999999999999999999  9999999999999


Q ss_pred             HHHHHhcCCC------CceeCCCCCCC
Q psy11070        106 THLKEHSNVS------APYMCDYKGVC  126 (148)
Q Consensus       106 ~h~~~h~~~~------k~~~C~~c~~~  126 (148)
                      .|+++|.+ +      ++|.|.+|++.
T Consensus        96 ~H~~~hh~-~~p~~~~k~~~C~~C~k~  121 (133)
T 2lt7_A           96 SHIKSVHS-QDPSGDSKLYRLHPCRSL  121 (133)
T ss_dssp             HHHHHHTC-CCTTSSSCCEEECCCCSS
T ss_pred             HHhHHhcC-CCCCCCCCCeecCCCCch
Confidence            99999876 4      46999999973

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.1e-19  Score=104.16  Aligned_cols=72  Identities=25%  Similarity=0.598  Sum_probs=67.8

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHH-HhcCCCceecCcCC--cccccCChHHHHHHHHHhcCCCCceeCCCCCCC
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKPLTLCCEELG--CGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVC  126 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~  126 (148)
                      +++++|.|.++.|++.|.....|..|++ .|+++++|.|.  .  |++.|.....|..|+++|++ ++||.|.+||+.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP--EPACGKSFNFKKHLKEHMKLHSD-TRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECS--CTTTCCEESSHHHHHHHHHHHHT-SCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECC--CCCCcCccCCHHHHHHHHHHhCC-CCCeeCCCCCCC
Confidence            5678999997779999999999999999 69999999999  7  99999999999999999999 999999999984

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=8.2e-20  Score=118.60  Aligned_cols=111  Identities=20%  Similarity=0.307  Sum_probs=96.5

Q ss_pred             hhcCCCCcceeeccC---CCc---cCCCCCceeCCCc---ccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChH
Q psy11070         32 LQSLGINKEYFISST---GGK---NSKKQQLWSCPIK---NCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMK  102 (148)
Q Consensus        32 ~~~~~~~~~~~~~~~---~~~---~h~~~k~~~C~~~---~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~  102 (148)
                      +.+..|++.|.....   |++   +|.++++|.|.+.   .|++.|.....|..|++.|.++++|.|.+..|++.|....
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            567789999888765   666   7889999999833   3459999999999999999999999998324999999999


Q ss_pred             HHHHHHHHhcCCCCceeCCC--CCCCcccccHHHHHHHH-HhhCCC
Q psy11070        103 QYSTHLKEHSNVSAPYMCDY--KGVCMSLTLKISFVKAV-ANNSKY  145 (148)
Q Consensus       103 ~l~~h~~~h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~-~~h~~~  145 (148)
                      .|..|+++|.+ +++|.|.+  |++  .|...+.|..|+ +.|.+.
T Consensus        84 ~l~~H~~~h~~-~~~~~C~~~~C~~--~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           84 NLKTHLRSHTG-EKPYMCEHEGCSK--AFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             HHHHHHHHTTT-CCCEECCSTTCCC--EESSSSTTHHHHHHTTCSC
T ss_pred             HHHHHHHHcCC-CCCeeCCCCCCCC--ccCCHHHHHHHHHHhcCCC
Confidence            99999999999 99999998  987  799999999998 778753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=1.6e-19  Score=99.41  Aligned_cols=59  Identities=27%  Similarity=0.490  Sum_probs=56.1

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCC
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k  116 (148)
                      .||||.|.  .|+++|.....|..|+++|+|++||.|.  .|++.|.....|..|+++|+| ++
T Consensus         1 SEKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Htg-ep   59 (60)
T 4gzn_C            1 SERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQN-KP   59 (60)
T ss_dssp             CCCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGSC-C-
T ss_pred             CCCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccCC-CC
Confidence            37999999  9999999999999999999999999999  999999999999999999998 54

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.78  E-value=9.2e-20  Score=122.24  Aligned_cols=108  Identities=19%  Similarity=0.351  Sum_probs=96.0

Q ss_pred             CCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHH-HH
Q psy11070         35 LGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL-KE  110 (148)
Q Consensus        35 ~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~-~~  110 (148)
                      ..|++.|.....   |++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|....|++.|.....|..|+ +.
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~   97 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF   97 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTT
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHh
Confidence            579998887754   88899999999993339999999999999999999999999998545999999999999999 77


Q ss_pred             h-cCCCCceeC--CCCCCCcccccHHHHHHHHHhhCCC
Q psy11070        111 H-SNVSAPYMC--DYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       111 h-~~~~k~~~C--~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      | .+ +++|.|  ..|++  .|.....|..|+++|++.
T Consensus        98 h~~~-~~~~~C~~~~C~k--~f~~~~~L~~H~~~H~~~  132 (190)
T 1tf6_A           98 HNIK-ICVYVCHFENCGK--AFKKHNQLKVHQFSHTQQ  132 (190)
T ss_dssp             SSTT-TSCCEECSSSSCE--ECSSHHHHHHHHGGGSSS
T ss_pred             cCCC-cceeeCCCCCCcc--ccCCHHHHHHHHHHhCCC
Confidence            8 46 789999  89998  799999999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2e-18  Score=107.94  Aligned_cols=87  Identities=16%  Similarity=0.357  Sum_probs=81.3

Q ss_pred             CCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHH---hcCCCCceeCCCCCCCcc
Q psy11070         52 KKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKE---HSNVSAPYMCDYKGVCMS  128 (148)
Q Consensus        52 ~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~---h~~~~k~~~C~~c~~~~~  128 (148)
                      +++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.   |.+ +++|.|.+|++  .
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~C~~C~~--~   75 (124)
T 2dlq_A            3 SGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRS-EQVFTCSVCQE--T   75 (124)
T ss_dssp             CCCSSCCCT--TTCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSC-CCCEECSSSCC--E
T ss_pred             CCCCCCCCC--CCCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCCC-CCCeECCCCCC--c
Confidence            567899999  9999999999999999999999999999  999999999999999985   577 89999999998  7


Q ss_pred             cccHHHHHHHHHhhCCC
Q psy11070        129 LTLKISFVKAVANNSKY  145 (148)
Q Consensus       129 f~~~~~l~~h~~~h~~~  145 (148)
                      |.....|..|+++|++.
T Consensus        76 f~~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           76 FRRRMELRLHMVSHTGE   92 (124)
T ss_dssp             ESSHHHHHHHHHHHSSS
T ss_pred             cCCHHHHHHHHHHcCCC
Confidence            99999999999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=1.4e-18  Score=108.86  Aligned_cols=87  Identities=24%  Similarity=0.545  Sum_probs=79.2

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC--CCCCcccc
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY--KGVCMSLT  130 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~f~  130 (148)
                      ++++|.|+++.|++.|.....|..|++.| ++++|.|.  .|++.|.....|..|+++|.+ +++|.|..  |++  .|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~--~f~   75 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTG-EKPFQCTFEGCGK--RFS   75 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECT--TTCCEESSHHHHHHHGGGTSC-CCCEECCSTTCCC--EES
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECC--CCCchhCCHHHHHHHHHHcCC-CCCeeCCCCCCcC--ccC
Confidence            45789999888999999999999999999 88999999  999999999999999999999 99999986  997  799


Q ss_pred             cHHHHHHHHHhhCCC
Q psy11070        131 LKISFVKAVANNSKY  145 (148)
Q Consensus       131 ~~~~l~~h~~~h~~~  145 (148)
                      ....|..|+++|++.
T Consensus        76 ~~~~l~~H~~~h~~~   90 (124)
T 1ubd_C           76 LDFNLRTHVRIHTGD   90 (124)
T ss_dssp             CHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhCCC
Confidence            999999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.75  E-value=9.2e-20  Score=107.96  Aligned_cols=83  Identities=23%  Similarity=0.390  Sum_probs=78.2

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHH
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKI  133 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~  133 (148)
                      ++||.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|.+  .+|.|..|++  .|....
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~--~f~~~~   72 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQHI--LPILEDKVEE--LLSKNY   72 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHHHHTH--HHHHHHHHHH--HHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCC--CCCCccCCHHHHHHHHHHhCC--CcchHHHHHH--HHHHHh
Confidence            4789999  9999999999999999999999999999  999999999999999999986  8999999997  799999


Q ss_pred             HHHHHHHhhCC
Q psy11070        134 SFVKAVANNSK  144 (148)
Q Consensus       134 ~l~~h~~~h~~  144 (148)
                      .|..|++.+++
T Consensus        73 ~L~~H~~~~h~   83 (88)
T 1llm_C           73 HLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhHHHHHHHHH
Confidence            99999988764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.75  E-value=7e-18  Score=98.73  Aligned_cols=80  Identities=26%  Similarity=0.511  Sum_probs=74.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCC--cccccCChHHHHHHHHHhcCCCCceeCCC---CCCCcccc
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELG--CGRKFQTMKQYSTHLKEHSNVSAPYMCDY---KGVCMSLT  130 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~---c~~~~~f~  130 (148)
                      ||.|.|+.|++.|.....|..|++.|.++++|.|.  .  |++.|.....|..|+++|++    |.|..   |++  .|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~--~f~   72 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP--HEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSF--VGK   72 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECC--STTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCC--EES
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCC--CCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCC--ccC
Confidence            58894449999999999999999999999999998  6  99999999999999999986    99999   887  799


Q ss_pred             cHHHHHHHHHhhC
Q psy11070        131 LKISFVKAVANNS  143 (148)
Q Consensus       131 ~~~~l~~h~~~h~  143 (148)
                      ..+.|..|+++|+
T Consensus        73 ~~~~l~~H~~~hh   85 (85)
T 2j7j_A           73 TWTLYLKHVAECH   85 (85)
T ss_dssp             SHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHhcC
Confidence            9999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=3.1e-17  Score=96.24  Aligned_cols=77  Identities=21%  Similarity=0.513  Sum_probs=71.6

Q ss_pred             cCCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCC----CceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         45 STGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP----LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        45 ~~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      ..|+++|.++++|.|.  .|++.|.....|..|++.|.+.    ++|.|.  .|++.|.....|..|+++|.+ ++++.|
T Consensus         4 ~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~~~~~   78 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCAG-PDGVEG   78 (86)
T ss_dssp             TCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECS--SSCCEESCHHHHHHHHHHCCC-CCSCCC
T ss_pred             ccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECC--CCCChhCCHHHHHHHHHHccC-CCCccc
Confidence            4589999999999999  9999999999999999987654    789999  999999999999999999999 999999


Q ss_pred             CCCCCC
Q psy11070        121 DYKGVC  126 (148)
Q Consensus       121 ~~c~~~  126 (148)
                      ..|+.+
T Consensus        79 ~~~~~~   84 (86)
T 1x6h_A           79 ENSGPS   84 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999973

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2e-17  Score=95.38  Aligned_cols=69  Identities=23%  Similarity=0.483  Sum_probs=64.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      ....+.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         9 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~-~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTG-SGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEESSHHHHHHHGGGSCC-CCCCCC
T ss_pred             CcCcCCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            34456778999999  9999999999999999999999999999  999999999999999999999 999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=4e-17  Score=98.20  Aligned_cols=77  Identities=14%  Similarity=0.205  Sum_probs=69.8

Q ss_pred             ccccCChHHHHHHHHHhcCCCceecCcCCccccc-CChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHH-HHhh
Q psy11070         65 NKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKF-QTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKA-VANN  142 (148)
Q Consensus        65 ~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f-~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h-~~~h  142 (148)
                      ...|.....|..|++.|.++++|.|.  .|++.| .....|..|+++| + +++|.|.+||+  .|...+.|..| +++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~-~k~~~C~~Cgk--~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-K-QEMFTCHHCGK--QLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-C-CCCCCCSSSCC--CCSSHHHHHHHHHHHT
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-C-CCCeECCCCCC--eeCCHHHHHHHhHHhc
Confidence            34666778889999999999999999  999999 9999999999999 8 99999999998  69999999999 9999


Q ss_pred             CCCCC
Q psy11070        143 SKYPV  147 (148)
Q Consensus       143 ~~~~~  147 (148)
                      ++.|+
T Consensus        87 ~~~p~   91 (96)
T 2ctd_A           87 NSLPS   91 (96)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            88765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.5e-17  Score=99.31  Aligned_cols=70  Identities=19%  Similarity=0.291  Sum_probs=64.7

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHH-Hh---cCCCceecCcCCcccccCChHHHHHH-HHHhcCCCCceeCCCCCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMV-RH---GKPLTLCCEELGCGRKFQTMKQYSTH-LKEHSNVSAPYMCDYKGV  125 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h---~~~~~~~c~~~~C~~~f~~~~~l~~h-~~~h~~~~k~~~C~~c~~  125 (148)
                      -.+++||.|.  .|++.|.....|..|++ .|   ++++||.|.  .|++.|.....|..| +++|++ ++||.|.++.+
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htg-ekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLKYHPG-EENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHHTSTT-CCCEEEEECCC
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhcCC-CCCeeCCcccC
Confidence            4678999999  99999999999999998 59   568999999  999999999999999 899999 99999988765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=91.29  Aligned_cols=65  Identities=26%  Similarity=0.523  Sum_probs=54.7

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      ..+.++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|++ ++||
T Consensus        10 ~~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTRIHSG-EKPY   74 (74)
T ss_dssp             -CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHHHHHCC-SCCC
T ss_pred             cccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHHHhcCC-CCCC
Confidence            345677888888  8888888888888888888888888888  888888888888888888888 7776

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=103.68  Aligned_cols=88  Identities=17%  Similarity=0.330  Sum_probs=79.9

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHH-hcCCCc--------eecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLT--------LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      ...+.+|.|.  .|++.|.....|..|++. |.+..+        |.|.  .|++.|.....|..|+++|.+ +++|.|.
T Consensus        20 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   94 (155)
T 2rpc_A           20 DEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTG-EKPFPCP   94 (155)
T ss_dssp             CTTCCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT--TSSCCCSSHHHHHHHTHHHHC-CCSEECS
T ss_pred             chhhcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC--CcccccCCHHHHHHHHHhcCC-CCcccCC
Confidence            4456789999  999999999999999998 877655        7899  999999999999999999999 9999999


Q ss_pred             C--CCCCcccccHHHHHHHHHhhCCC
Q psy11070        122 Y--KGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       122 ~--c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      +  |++  .|.....|..|+++|++.
T Consensus        95 ~~~C~~--~f~~~~~L~~H~~~h~~~  118 (155)
T 2rpc_A           95 FPGCGK--IFARSENLKIHKRTHTGE  118 (155)
T ss_dssp             CTTTCC--EESCHHHHHHHHTTTCSS
T ss_pred             cCCCCC--ccCCHHHHHHHHHhhCCC
Confidence            8  997  799999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.67  E-value=2.6e-17  Score=100.36  Aligned_cols=85  Identities=18%  Similarity=0.358  Sum_probs=78.3

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH  107 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h  107 (148)
                      .+.+..|++.|.....   |++.|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCCCCTTSCS--SSCCCCSSHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCCCCCeECC--CcCCcccCHHHHHHH
Confidence            3667789998887754   88899999999999  9999999999999999999999999999  999999999999999


Q ss_pred             HHHhcCCCCceeC
Q psy11070        108 LKEHSNVSAPYMC  120 (148)
Q Consensus       108 ~~~h~~~~k~~~C  120 (148)
                      +++|.+ +++|.+
T Consensus        93 ~~~H~~-~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQ-TSSPTA  104 (106)
T ss_dssp             HHHTTS-CCCCCC
T ss_pred             HHHhCC-CCCCcC
Confidence            999999 899865

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.9e-16  Score=89.34  Aligned_cols=63  Identities=22%  Similarity=0.406  Sum_probs=45.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +.++|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|++
T Consensus         5 ~~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            5 SSGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CCCTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEESSHHHHHHHHHHHHS
T ss_pred             CCcccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccCCHHHHHHHHHhcCC
Confidence            45667777777777  7777777777777777777777777777  777777777777777777766

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.4e-16  Score=94.31  Aligned_cols=82  Identities=16%  Similarity=0.258  Sum_probs=75.4

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH  107 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h  107 (148)
                      .+.+..|++.|.....   |+++|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQ--ICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEECS--SSSCEESSHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHH
Confidence            3567789998887764   89999999999999  9999999999999999999999999999  999999999999999


Q ss_pred             HHHhcCCCCc
Q psy11070        108 LKEHSNVSAP  117 (148)
Q Consensus       108 ~~~h~~~~k~  117 (148)
                      +++|++ +++
T Consensus        84 ~~~h~~-~~~   92 (96)
T 2dmd_A           84 LRSHTG-DSG   92 (96)
T ss_dssp             HTTCCS-CCC
T ss_pred             HHHhcC-CCC
Confidence            999999 664

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.1e-16  Score=88.72  Aligned_cols=63  Identities=19%  Similarity=0.371  Sum_probs=59.5

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYP  146 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~~  146 (148)
                      ++|+++++|.|.  .|++.|.....|..|+++|.+ ++||.|.+|++  .|.....|..|+++|++.|
T Consensus         7 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~-~~~~~C~~C~~--~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTG-EKPYKCLECGK--AFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGC-SCCEECSSSCC--EESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCC--CCCCccCCHHHHHHHHHhcCC-CCCeECCCCCc--ccCCHHHHHHHHHhcCCCC
Confidence            468999999999  999999999999999999999 99999999998  7999999999999998765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=7.2e-17  Score=95.47  Aligned_cols=76  Identities=22%  Similarity=0.438  Sum_probs=70.0

Q ss_pred             CCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         36 GINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        36 ~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      .|++.|.....   |+++|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHGGGG
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHHHcCCCCCccCC--CCCchhCCHHHHHHHHHHhc
Confidence            68898887754   88899999999999  9999999999999999999999999999  99999999999999999999


Q ss_pred             CCCC
Q psy11070        113 NVSA  116 (148)
Q Consensus       113 ~~~k  116 (148)
                      + ++
T Consensus        87 ~-~k   89 (90)
T 1a1h_A           87 R-QK   89 (90)
T ss_dssp             C---
T ss_pred             c-cC
Confidence            8 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.3e-16  Score=87.41  Aligned_cols=64  Identities=16%  Similarity=0.290  Sum_probs=51.8

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      .|+++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|.+ ++|.
T Consensus         3 s~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKFHG-DMSG   66 (70)
T ss_dssp             SCCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEESSHHHHHHHHHHHHS-SSCC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCccCCHHHHHHHHHHHhC-CCCC
Confidence            46677888888  8888888888888888888888888888  888888888888888888887 6654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=1.1e-16  Score=92.97  Aligned_cols=77  Identities=26%  Similarity=0.404  Sum_probs=70.1

Q ss_pred             hcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHH
Q psy11070         33 QSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        33 ~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      .+..|++.|.....   |+++|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHHHHHTCCCEECT--TTSCEESSHHHHHHHHH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHHHhcCCCCCcCC--CcchhhCChHHHHHHHH
Confidence            45678888877654   78889999999999  9999999999999999999999999999  99999999999999999


Q ss_pred             HhcC
Q psy11070        110 EHSN  113 (148)
Q Consensus       110 ~h~~  113 (148)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9975

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=9.1e-17  Score=96.90  Aligned_cols=70  Identities=24%  Similarity=0.380  Sum_probs=60.8

Q ss_pred             CCccCCCCCceeCCCcccccccC-ChHHHHHHHHHhcC-CCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFT-TLSNLKMHMVRHGK-PLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~-~~~~l~~h~~~h~~-~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |+++|.++++|.|.  .|++.|. ....|..|++.|++ +++|.|.  .|++.|.....|..|+++|++ ++|+...
T Consensus        15 h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~-~kp~~~~   86 (98)
T 2gqj_A           15 WQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQ--HCRKQFKSKAGLNYHTMAEHS-AKPSDAE   86 (98)
T ss_dssp             HHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCS--SSCCCCSCHHHHHHHHHHHSC-SCSSCCC
T ss_pred             HHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECC--CCCCccCCHHHHHHHHHHHcC-CCCCCCC
Confidence            67788888999999  9999998 88999999998888 8889999  899999999999999998988 8876543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=5.4e-16  Score=86.62  Aligned_cols=61  Identities=21%  Similarity=0.328  Sum_probs=45.6

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHH-h-cCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKE-H-SNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~-h-~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++ | .+ ++||.|..|++  .|...+.|..|++.|++
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~-~~~~~C~~C~k--~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRN-VKVYPCPFCFK--EFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSS-CCCEECTTTCC--EESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCC-CcCeECCCCCC--ccCCHHHHHHHHHHHcC
Confidence            346777777777  777777777777777776 6 46 77788888776  57777778888777765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=2.8e-16  Score=94.71  Aligned_cols=74  Identities=8%  Similarity=0.039  Sum_probs=65.1

Q ss_pred             ccCChHHHHHHHHHhcCCCceecCcCCcccccC-ChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         67 RFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQ-TMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        67 ~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~-~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      .+.....+..|++.|+++++|.|.  .|++.|. ....|..|+++|.+.+++|.|.+|++  .|.+...|..|+++|++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k--~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRK--QFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCC--CCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCC--ccCCHHHHHHHHHHHcC
Confidence            344445567899999999999999  9999999 99999999999885258999999998  69999999999998875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.61  E-value=1.2e-15  Score=82.73  Aligned_cols=57  Identities=23%  Similarity=0.463  Sum_probs=39.8

Q ss_pred             CCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         83 KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        83 ~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |+++|.|.  .|++.|.....|..|+++|++ ++||.|.+|++  .|.....|..|++.|++
T Consensus         1 g~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECS--YCGKFFRSNYYLNIHLRTHTG-EKPYKCEFCEY--AAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCT--TTCCBCSCHHHHHHHHHHHHC-CCCEECSSSSC--EESSHHHHHHHHHHHC-
T ss_pred             CCCCccCC--CCcchhCChHHHHHHHHHcCC-CCCcCCCCCcc--hhCCHHHHHHHHHHhcC
Confidence            35677777  777777777777777777777 77777777776  57777777777777764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=5.7e-16  Score=93.27  Aligned_cols=77  Identities=26%  Similarity=0.482  Sum_probs=70.4

Q ss_pred             CCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHh
Q psy11070         35 LGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        35 ~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .+|++.|.....   |+++|.++++|.|.++.|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           21 PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG--VCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             SSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS--SSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCcCccCCHHHHHHHHHHh
Confidence            359998887755   88899999999997557999999999999999999999999999  9999999999999999999


Q ss_pred             cC
Q psy11070        112 SN  113 (148)
Q Consensus       112 ~~  113 (148)
                      ++
T Consensus        99 ~~  100 (100)
T 2ebt_A           99 QN  100 (100)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.1e-16  Score=91.08  Aligned_cols=69  Identities=23%  Similarity=0.580  Sum_probs=51.4

Q ss_pred             cCCCccCCCCCceeCCCcccccccCChHHHHHHHH-HhcCC-CceecCcCCcccccCChHHHHHHHHHhcCCCCc
Q psy11070         45 STGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKP-LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAP  117 (148)
Q Consensus        45 ~~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~-~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~  117 (148)
                      ..|+++|+++++|.|.  .|++.|.....|..|++ .|.++ ++|.|.  .|++.|.....|..|++++.+.+.|
T Consensus         4 ~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3477788888888888  88888888888888876 56654 778888  7888888888888888764431444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.60  E-value=7.8e-16  Score=90.74  Aligned_cols=76  Identities=24%  Similarity=0.457  Sum_probs=69.2

Q ss_pred             CCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHh
Q psy11070         35 LGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        35 ~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .+|++.|.....   |+++|.++++|.|.++.|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           11 AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ--KCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHGGGG
T ss_pred             CCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCcccCCHHHHHHHHHhh
Confidence            348898887765   88999999999998557999999999999999999999999999  9999999999999999988


Q ss_pred             c
Q psy11070        112 S  112 (148)
Q Consensus       112 ~  112 (148)
                      .
T Consensus        89 ~   89 (89)
T 2wbs_A           89 F   89 (89)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=2.9e-15  Score=87.89  Aligned_cols=62  Identities=19%  Similarity=0.342  Sum_probs=43.9

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHH-HHhcC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL-KEHSN  113 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~-~~h~~  113 (148)
                      +..+...++|.|+  .|++.|.....|..|+++|++++||.|.  .|++.|.+...|..|+ ++|++
T Consensus        20 ~~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           20 LGLSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCK--YCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CSSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECT--TSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCC--CCCCEeCCHHHHHHhCcccCcC
Confidence            4455566677777  7777777777777777777777777777  7777777777777775 45665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.59  E-value=4.4e-16  Score=98.14  Aligned_cols=85  Identities=14%  Similarity=0.100  Sum_probs=73.5

Q ss_pred             CCCceeCCCcccccccC------ChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCC
Q psy11070         53 KQQLWSCPIKNCNKRFT------TLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVC  126 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~  126 (148)
                      .++.+.|.  .|.+.|.      ....|..|+ .|++++||.|.  .|++.|.....|..|+++|   ++||.|..||+ 
T Consensus        38 ~~~~~~c~--~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k-  108 (129)
T 2wbt_A           38 EQKRLIRA--IVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP--LCLMPFSSSVSLKQHIRYT---EHTKVCPVCKK-  108 (129)
T ss_dssp             HHHHHHHH--HHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT--TTCCEESSHHHHHHHHHHT---CCCCBCTTTCC-
T ss_pred             hhCcccch--hhhcccCCCcccCCHHHHHHHH-HhCCCCCeECC--CCCcccCCHhHHHHHHHHC---CCCCCCCCCCc-
Confidence            34567777  7777665      566677776 68889999999  9999999999999999999   48999999998 


Q ss_pred             cccccHHHHHHHHHhhCCCCC
Q psy11070        127 MSLTLKISFVKAVANNSKYPV  147 (148)
Q Consensus       127 ~~f~~~~~l~~h~~~h~~~~~  147 (148)
                       .|...+.|..|+++|++..|
T Consensus       109 -~f~~~~~l~~H~~~h~~~~v  128 (129)
T 2wbt_A          109 -EFTSTDSALDHVCKKHNICV  128 (129)
T ss_dssp             -BCSSHHHHHHHHHHTTCCCC
T ss_pred             -ccCCHHHHHHHHHHHCCccC
Confidence             69999999999999999865

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.5e-15  Score=84.90  Aligned_cols=59  Identities=14%  Similarity=0.265  Sum_probs=56.1

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |+++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|++  .|.....|..|+++|++
T Consensus         4 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~~--~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            4 GSSGHPEKCS--ECSYSCSSKAALRIHERIHCT-DRPFKCNYCSF--DTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             CCCCCSEECS--SSSCEESSHHHHHHHHGGGCC-SCSEECSSSSC--EESSHHHHHHHHHHHHS
T ss_pred             CCCCCCeECC--CCCcccCCHHHHHHHHHHcCC-CCCEeCCCCCC--ccCCHHHHHHHHHHHhC
Confidence            6789999999  999999999999999999999 99999999998  79999999999999875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=4.7e-15  Score=84.65  Aligned_cols=62  Identities=16%  Similarity=0.303  Sum_probs=57.2

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      ..+.++++|.|.  .|++.|.....|..|+++|++ +++|.|.+|++  .|.....|..|+++|++.
T Consensus        10 ~~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k--~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTG-EKPYRCNICGA--QFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCC--EESCHHHHHHHHHHHCCS
T ss_pred             cccCCCCCeECC--CCCceeCCHHHHHHHHHHcCC-CCCEECCCCCc--hhCCHHHHHHHHHhcCCC
Confidence            346788999999  999999999999999999999 99999999998  799999999999999864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.9e-15  Score=84.12  Aligned_cols=67  Identities=15%  Similarity=0.236  Sum_probs=60.1

Q ss_pred             HHHHHHHhcCCCceecCcCCcccccCChHHHHHHHH-HhcCCC-CceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         74 LKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVS-APYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        74 l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~-k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      |..|+++|++++||.|.  .|++.|.....|..|++ .|.+ + ++|.|.+|++  .|.....|..|++.+++.
T Consensus         3 ~~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~-~~~~~~C~~C~~--~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTE-NVAKFHCPHCDT--VIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSS-SCSSEECSSSSC--EESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCC-CCCccCCCCCCC--ccCCHHHHHHHHHHhCCC
Confidence            34578899999999999  99999999999999997 7887 5 8999999998  799999999999987753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=5.7e-16  Score=94.62  Aligned_cols=85  Identities=18%  Similarity=0.146  Sum_probs=75.6

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH  107 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h  107 (148)
                      .+.+..|++.|.....   |+++|  .++|.|.  .|++.|.....|..|++ |+++++|.|.  .|++.|.....|..|
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~~~C~--~C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERLC--RNAAVCP--YCSLRFFSPELKQEHES-KCEYKKLTCL--ECMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCT--TTCCCBSSHHHHHHHHH-HCSTGGGEEG--GGTEECSSHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHC--CCCccCC--CCCCccCCHHHHHHHHH-cCCCCCccCc--cccchhCCHHHHHHH
Confidence            4667789998887754   77777  4789999  99999999999999996 9999999999  999999999999999


Q ss_pred             HH-HhcCCCCceeCCCC
Q psy11070        108 LK-EHSNVSAPYMCDYK  123 (148)
Q Consensus       108 ~~-~h~~~~k~~~C~~c  123 (148)
                      ++ +|++ +++|.|...
T Consensus        89 ~~~~H~~-~~~~~~~~p  104 (107)
T 1wjp_A           89 QVEVHNQ-NNMAPTSGP  104 (107)
T ss_dssp             HHHTSCC-CCCCCCCCS
T ss_pred             HHHHcCC-CCCCCCCCC
Confidence            97 9999 999988654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.9e-15  Score=88.52  Aligned_cols=67  Identities=16%  Similarity=0.318  Sum_probs=61.1

Q ss_pred             HHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCC----CceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         74 LKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVS----APYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        74 l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~----k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      |..|+++|+++++|.|.  .|++.|.....|..|++.|.+ .    ++|.|.+|++  .|.....|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~-~~~~~~~~~C~~C~~--~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD-PNFVPAAFVCSKCGK--TFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             TTCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTC-SSCCCCCEECSSSCC--EESCHHHHHHHHHHCCCC
T ss_pred             cccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcC-CcCCCcceECCCCCC--hhCCHHHHHHHHHHccCC
Confidence            45688999999999999  999999999999999988776 4    7999999998  799999999999999865

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.56  E-value=6.9e-15  Score=79.63  Aligned_cols=57  Identities=23%  Similarity=0.373  Sum_probs=50.7

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ++++|.|.  .|++.|.....|..|++.|++++||.|.  .|++.|.....|..|+++|.+
T Consensus         1 g~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCC--CCcchhCCHHHHHHHHHHhcC
Confidence            46889999  9999999999999999999999999999  999999999999999998863

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=6.2e-15  Score=82.24  Aligned_cols=62  Identities=21%  Similarity=0.412  Sum_probs=57.4

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHH-h-cCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVR-H-GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~-h-~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      .++|.++++|.|.  .|++.|.....|..|++. | .++++|.|.  .|++.|.....|..|+++|.+
T Consensus         2 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccCCHHHHHHHHHHHcC
Confidence            4578899999999  999999999999999998 7 689999999  999999999999999998875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.1e-14  Score=82.83  Aligned_cols=59  Identities=15%  Similarity=0.366  Sum_probs=29.2

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhh
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |.++++|.|++..|++.|.....|..|+++|.+ +++|.|.+||+  .|...+.|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-QKPFQCRICMR--NFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-CCCEECTTTCC--EESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-CCCeECCCCCc--hhCCHHHHHHHHHhc
Confidence            344445555311355555555555555555555 45555555554  355555555555444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=7.9e-15  Score=86.03  Aligned_cols=61  Identities=13%  Similarity=0.261  Sum_probs=54.9

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHH-hhCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVA-NNSK  144 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~-~h~~  144 (148)
                      .++.+.++|.|+  .|++.|.+...|..|+++|++ ++||.|.+|++  .|.+...|..|++ .|.+
T Consensus        21 ~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~-~k~~~C~~C~k--~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           21 GLSASAECHLCP--VCGESFASKGAQERHLRLLHA-AQVFPCKYCPA--TFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSC-SSSEECTTSSC--EESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccC-CCccCCCCCCC--EeCCHHHHHHhCcccCcC
Confidence            346677899999  999999999999999999999 99999999998  7999999999975 5654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=3e-15  Score=89.96  Aligned_cols=67  Identities=22%  Similarity=0.383  Sum_probs=60.0

Q ss_pred             CCccCCCCCceeCCCccccccc-CChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHH-HHHhcCCCCcee
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRF-TTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH-LKEHSNVSAPYM  119 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f-~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h-~~~h~~~~k~~~  119 (148)
                      +.+.+.++++|.|.  .|++.| .....|..|++.| ++++|.|.  .|++.|.....|..| +++|++ +..|.
T Consensus        25 ~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C~--~Cgk~F~~~~~L~~H~~~~H~~-~p~~~   93 (96)
T 2ctd_A           25 WYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTCH--HCGKQLRSLAGMKYHVMANHNS-LPSGP   93 (96)
T ss_dssp             HHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCCS--SSCCCCSSHHHHHHHHHHHTCC-CSSCS
T ss_pred             HHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeECC--CCCCeeCCHHHHHHHhHHhcCC-CCCCC
Confidence            45556678999999  999999 9999999999999 99999999  999999999999999 999987 54443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.55  E-value=3.7e-15  Score=88.87  Aligned_cols=79  Identities=22%  Similarity=0.412  Sum_probs=71.7

Q ss_pred             hhhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCC--CceecCcCCcccccCChHHHH
Q psy11070         31 ALQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP--LTLCCEELGCGRKFQTMKQYS  105 (148)
Q Consensus        31 ~~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~--~~~~c~~~~C~~~f~~~~~l~  105 (148)
                      .+.+..|++.|.....   |+++|.++++|.|.  .|++.|.....|..|++.|.++  ++|.|.  .|++.|.....|.
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~~~~L~   82 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYICQ--SCGKGFSRPDHLN   82 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSSBCCS--SSCCCBSSHHHHH
T ss_pred             CeECCCCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCceECC--CccchhCCHHHHH
Confidence            3567789998887754   88899999999999  9999999999999999999987  899999  9999999999999


Q ss_pred             HHHH-HhcC
Q psy11070        106 THLK-EHSN  113 (148)
Q Consensus       106 ~h~~-~h~~  113 (148)
                      .|++ .|.+
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            9986 7887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=1.1e-14  Score=83.81  Aligned_cols=67  Identities=22%  Similarity=0.386  Sum_probs=54.9

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcC---CCceecCcCCcccccCChHHHHHHH-HHhcCCCCceeCC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK---PLTLCCEELGCGRKFQTMKQYSTHL-KEHSNVSAPYMCD  121 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~~~C~~~f~~~~~l~~h~-~~h~~~~k~~~C~  121 (148)
                      +|+++++|.|.  .|++.|.....|..|++.|.+   +++|.|.  .|++.|.....|..|+ +.|.+ +++....
T Consensus         1 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~   71 (78)
T 2d9h_A            1 GSSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHRSKSHPA-LLLAPQE   71 (78)
T ss_dssp             CCCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHHHHTSTT-TSSCCSS
T ss_pred             CCCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHHHHhCCC-CCCCccc
Confidence            46788889988  899999888889889888875   7888898  8999998888898888 56777 6665543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.4e-14  Score=82.43  Aligned_cols=64  Identities=25%  Similarity=0.566  Sum_probs=58.8

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      ...++.++++|.|+++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+
T Consensus        10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHTTCC
T ss_pred             hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHHHhcC
Confidence            35568899999998557999999999999999999999999999  99999999999999999885

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.53  E-value=2.5e-14  Score=77.40  Aligned_cols=53  Identities=26%  Similarity=0.512  Sum_probs=29.5

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|.+
T Consensus         2 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            2 YICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHHHSSSS
T ss_pred             CcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHHHHhcc
Confidence            4555  5555555555555555555555555555  555555555555555555554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.6e-14  Score=83.06  Aligned_cols=61  Identities=20%  Similarity=0.456  Sum_probs=56.6

Q ss_pred             HhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         80 RHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        80 ~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      .+.++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|++  .|.....|..|+++|++.
T Consensus        12 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           12 QQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGK--AFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             CCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCC--EESSHHHHHHHGGGSCCC
T ss_pred             cCCCCCCEECC--CCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCC--ccCCHHHHHHHHHHhCCC
Confidence            35678999999  999999999999999999999 99999999998  799999999999999864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=2.8e-14  Score=77.19  Aligned_cols=55  Identities=24%  Similarity=0.551  Sum_probs=51.7

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      ||.|.  .|++.|.....|..|+++|.+ +++|.|..|++  .|...+.|..|+++|++.
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNF--SFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSS-CCCEECSSSSC--EESSHHHHHHHHHSSSSC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCC-CCCccCCCCCc--hhcCHHHHHHHHHHhccc
Confidence            58899  999999999999999999999 99999999998  799999999999998763

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=4.9e-14  Score=81.12  Aligned_cols=59  Identities=17%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC--CCCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN--VSAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~--~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |+++++|.|.  .|++.|.....|..|+++|.+  .+++|.|.+|++  .|.....|..|++.++
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k--~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGK--RFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCC--EESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCc--hhCCHHHHHHHHHHhC
Confidence            7899999999  999999999999999999983  168999999998  7999999999996544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=4.6e-14  Score=84.10  Aligned_cols=61  Identities=18%  Similarity=0.325  Sum_probs=57.2

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH-hcCCCc--------eecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR-HGKPLT--------LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      .+.|.  .|++.|.....|..|++. |.++++        |.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus        25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   94 (95)
T 2ej4_A           25 SRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTG-EKSGPSS   94 (95)
T ss_dssp             SSSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS--STTCCCSSHHHHHHHHHHHHT-CCCCSSC
T ss_pred             CCccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCC--CCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            36788  999999999999999998 999887        8999  999999999999999999999 9999996

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=8.1e-15  Score=89.79  Aligned_cols=77  Identities=18%  Similarity=0.300  Sum_probs=70.9

Q ss_pred             hhcCCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHH
Q psy11070         32 LQSLGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL  108 (148)
Q Consensus        32 ~~~~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~  108 (148)
                      +.+ .|++.|.....   |++.|.++++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+
T Consensus        11 ~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~   85 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWRDSFHRHV   85 (110)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTTCCCCCEECS--SSCCEESCHHHHHHHH
T ss_pred             Eec-cCCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHHHcCCCCCeeCC--CCcchhcCHHHHHHHH
Confidence            556 79998887754   88899999999999  9999999999999999999999999999  9999999999999999


Q ss_pred             HHhcC
Q psy11070        109 KEHSN  113 (148)
Q Consensus       109 ~~h~~  113 (148)
                      ++|..
T Consensus        86 ~~~~~   90 (110)
T 2csh_A           86 TSCTK   90 (110)
T ss_dssp             HHHHH
T ss_pred             HHccc
Confidence            98865

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=7.8e-14  Score=76.22  Aligned_cols=49  Identities=24%  Similarity=0.581  Sum_probs=24.3

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAV  139 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~  139 (148)
                      ||.|.  .|++.|.....|..|+++|++ +++|.|..|++  .|.+.+.|..|+
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~--~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCE--VCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNR--AFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCT--TTCCCBSCHHHHHHHHHTTTS-SCSEECTTTCC--EESSHHHHHHHH
T ss_pred             cCcCC--CCccccCCHHHHHHHHHHhCC-CCCccCCCCCC--ccCCHHHHHHHH
Confidence            34454  455555555555555555554 44555555554  344455555553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.3e-13  Score=75.32  Aligned_cols=55  Identities=27%  Similarity=0.484  Sum_probs=52.4

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHH-HHhcC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHL-KEHSN  113 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~-~~h~~  113 (148)
                      +||.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+ ++|++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHHHHHHcCC
Confidence            579999  9999999999999999999999999999  9999999999999997 68887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4.3e-16  Score=88.50  Aligned_cols=66  Identities=17%  Similarity=0.145  Sum_probs=61.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      .|+++|.++++|.|.  .|++.|.....|..       +++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         8 ~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~-------~~~~~C~--~C~~~f~~~~~l~~H~~~H~~-~~~~~C~~C   73 (73)
T 2ctu_A            8 KRQKIHLGDRSQKCS--KCGIIFIRRSTLSR-------RKTPMCE--KCRKDSCQEAALNKDEGNESG-KKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCSEEECS--SSCCEEECCCCCCC-------SSSCCCH--HHHHTCSCCCSSCCCSSCCCC-CCCSSCCCC
T ss_pred             HHHHHhCCCCCeeCC--cccchhCCHHHhCc-------CCCCCCC--CCChhhcCHHHHHHHHHhhcC-CCCCCCCCC
Confidence            488999999999999  99999998888765       7899999  999999999999999999999 999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=9.3e-14  Score=84.15  Aligned_cols=60  Identities=12%  Similarity=0.163  Sum_probs=54.5

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHH-Hh---cCCCCceeCCCCCCCcccccHHHHHHH-HHhhCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLK-EH---SNVSAPYMCDYKGVCMSLTLKISFVKA-VANNSKY  145 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h---~~~~k~~~C~~c~~~~~f~~~~~l~~h-~~~h~~~  145 (148)
                      -+|++||.|.  .|++.|.....|..|++ +|   ++ ++||.|.+||+  .|...+.|..| +++|++.
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~-ekpf~C~~Cgk--~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVL-NSSYVCVECNF--LTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCC-SCCEEETTTTE--EESSTHHHHTHHHHTSTTC
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCC-CCCcCCCCCCc--ccCCHHHHHHHHHHhcCCC
Confidence            4689999999  99999999999999998 59   67 89999999998  79999999999 8998863

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.42  E-value=5.4e-14  Score=81.91  Aligned_cols=73  Identities=26%  Similarity=0.394  Sum_probs=64.9

Q ss_pred             CCCCcceeeccC---CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCC---cccccCChHHHHHHH
Q psy11070         35 LGINKEYFISST---GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELG---CGRKFQTMKQYSTHL  108 (148)
Q Consensus        35 ~~~~~~~~~~~~---~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~---C~~~f~~~~~l~~h~  108 (148)
                      ..|++.|.....   |+++|.++++|.|.++.|++.|.....|..|++.|++   |.|.  .   |++.|.....|..|+
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~--~~~~C~~~f~~~~~l~~H~   81 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK--KDDSCSFVGKTWTLYLKHV   81 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECC--SCSSCCCEESSHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCC--CCCCCCCccCCHHHHHHHH
Confidence            678888877754   8889999999999822399999999999999999998   9999  8   999999999999999


Q ss_pred             HHhc
Q psy11070        109 KEHS  112 (148)
Q Consensus       109 ~~h~  112 (148)
                      ++|.
T Consensus        82 ~~hh   85 (85)
T 2j7j_A           82 AECH   85 (85)
T ss_dssp             HHCC
T ss_pred             HhcC
Confidence            9873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.41  E-value=4.4e-13  Score=78.83  Aligned_cols=56  Identities=20%  Similarity=0.377  Sum_probs=52.9

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ++||.|.  .|++.|.....|..|+++|.+ ++||.|..|++  .|.....|..|++.|++
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k--~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR--KFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHC-CCCEECTTTCC--EESSHHHHHHHHHHHTH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCC-CCCccCCCCCC--ccCCHHHHHHHHHHhCC
Confidence            4789999  999999999999999999999 99999999998  79999999999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=6.7e-13  Score=76.33  Aligned_cols=61  Identities=23%  Similarity=0.409  Sum_probs=55.1

Q ss_pred             cCCCceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCC--CCCCcccccHHHHHHHHHhhCCC
Q psy11070         82 GKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDY--KGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        82 ~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      +++++|.|.+..|++.|.....|..|++ .|++ +++|.|.+  |++  .|.....|..|+++|++.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k--~f~~~~~L~~H~~~H~~~   66 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGK--SFNFKKHLKEHMKLHSDT   66 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCC--EESSHHHHHHHHHHHHTS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcC--ccCCHHHHHHHHHHhCCC
Confidence            5678999995459999999999999999 7999 99999999  998  799999999999999753

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=9.3e-14  Score=71.21  Aligned_cols=42  Identities=14%  Similarity=0.248  Sum_probs=22.2

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECS--SSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCcCCCcCccCC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344555555555  555555555555555555555 555555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1e-13  Score=71.71  Aligned_cols=43  Identities=16%  Similarity=0.221  Sum_probs=21.2

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECS--SSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             cCCcCCCCCeeCC--CCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3344444455554  455555555555555555554 455555444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=6.1e-13  Score=74.16  Aligned_cols=56  Identities=16%  Similarity=0.303  Sum_probs=47.0

Q ss_pred             cCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC-CCCCCcccccHHHHHHHHHhhCC
Q psy11070         82 GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD-YKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        82 ~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~-~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      -+++||.|.  .|++.|. ...|..|+++ ++ ++||.|. .||+  .|...+.|..|+++|-.
T Consensus         6 C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~-~~p~~C~~~C~k--~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CP-RLPVACPNQCGV--GTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECS--SSCCEEE-HHHHHHHHHH-CS-SSEEECTTCCSC--CEEETTTHHHHHHTTSS
T ss_pred             CCCCCeecc--ccCCccC-HHHHHHHHHH-cC-CcCccCCcccCc--ccccHHHHHHHHHhhcc
Confidence            356788898  8999999 8889999888 88 8899999 8987  58888889999888753

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=71.29  Aligned_cols=44  Identities=18%  Similarity=0.247  Sum_probs=24.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECS--SSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             cccCCCCCcCeECC--CCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34445555555555  555555555555555555555 555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.8e-14  Score=72.02  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=22.9

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.+...|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            4 GSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSSSSSCCEECS--SSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             ccccCCCCCeECC--CCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.38  E-value=1.1e-13  Score=71.58  Aligned_cols=44  Identities=23%  Similarity=0.271  Sum_probs=25.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECS--SSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CccCCCCCcCcCCC--CCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34445555555555  566666666666666555555 555655554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=71.44  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=24.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECS--SSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34445555555555  555555555555555555555 555555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=71.77  Aligned_cols=43  Identities=19%  Similarity=0.235  Sum_probs=22.4

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +++|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECT--TTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCCCCCCcCCC--CCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=71.64  Aligned_cols=43  Identities=16%  Similarity=0.283  Sum_probs=21.9

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECS--SSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             cccCCCCCCEeCC--cCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            3344455555555  555555555555555555555 455555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.38  E-value=1.2e-13  Score=71.57  Aligned_cols=42  Identities=17%  Similarity=0.300  Sum_probs=20.7

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         5 ~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCS--SSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CccCCCCceECC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            344444455554  455555555555555555554 455555443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=71.54  Aligned_cols=43  Identities=19%  Similarity=0.270  Sum_probs=22.0

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECS--SSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             ccccCCCcCeECC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3444455555555  555555555555555555555 555555444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=71.78  Aligned_cols=44  Identities=18%  Similarity=0.244  Sum_probs=24.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECS--SSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             cccCCCCCCCeECC--CCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            33445555555555  555555555555555555555 555555554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=7.9e-13  Score=74.80  Aligned_cols=62  Identities=27%  Similarity=0.515  Sum_probs=37.0

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHh
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .+...++|.|.++.|++.|.....|..|++.|+++++|.|.+..|++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34445666666223666666666666666666666666664113666666666666666544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=71.56  Aligned_cols=44  Identities=20%  Similarity=0.253  Sum_probs=24.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECS--SSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCC--CcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            33445555555555  555555555555555555555 555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=71.55  Aligned_cols=44  Identities=16%  Similarity=0.245  Sum_probs=26.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEET--TTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCCCCCCCeECC--CcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34455556666666  566666666666666666666 566666554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=71.53  Aligned_cols=42  Identities=21%  Similarity=0.383  Sum_probs=21.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CcccCCCCCCeECC--CCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            44445555555555  5555555555555555555555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=9.5e-14  Score=71.86  Aligned_cols=43  Identities=16%  Similarity=0.221  Sum_probs=24.1

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCT--TTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CcCCCCCcCeECC--CCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.38  E-value=1.1e-13  Score=71.72  Aligned_cols=42  Identities=21%  Similarity=0.368  Sum_probs=22.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCcccC--ccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=71.43  Aligned_cols=42  Identities=19%  Similarity=0.296  Sum_probs=20.8

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECH--ECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECS--SSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCCCcCcCCC--CCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            344444555555  455555555555555555554 455555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=71.21  Aligned_cols=42  Identities=17%  Similarity=0.297  Sum_probs=20.7

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.+...|..|+++|++ ++||.|..|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECS--SSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             cccCCCcCeECC--CCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            344444455554  455555555555555555554 455555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.2e-14  Score=88.52  Aligned_cols=87  Identities=14%  Similarity=0.158  Sum_probs=73.5

Q ss_pred             hhhhcCCCCcceeeccC---CCcc--CCCCCcee-CCCccccccc--CChHHHHHHHHHhcCCCceecCcCCcccccCCh
Q psy11070         30 EALQSLGINKEYFISST---GGKN--SKKQQLWS-CPIKNCNKRF--TTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTM  101 (148)
Q Consensus        30 ~~~~~~~~~~~~~~~~~---~~~~--h~~~k~~~-C~~~~C~~~f--~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~  101 (148)
                      .++.+..|++.|.....   |+++  |.+.+++. |.  .|++.|  .....|..|++.|++++||.|.  .|++.|...
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~--~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~   93 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN--NNPKRWSKPRKRSLLEMEGKEDAQKVLKCM--YCGHSFESL   93 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCC--CCCSCCSSCCCCCCCCCCCSCCCCSSCBCS--SSCCBCSSH
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCC--CCCcccccccHHHHHHHhhccCCCcceECC--CCCCccCCH
Confidence            34678889999988765   7777  77677654 99  999999  8899999999999999999999  999999999


Q ss_pred             HHHHHHHHHhcCCCCceeCC
Q psy11070        102 KQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus       102 ~~l~~h~~~h~~~~k~~~C~  121 (148)
                      ..|..|+++|.. .....++
T Consensus        94 ~~L~~H~~~hh~-~~~~~~~  112 (115)
T 2dmi_A           94 QDLSVHMIKTKH-YQKVSGP  112 (115)
T ss_dssp             HHHHHHHHHTTT-TTCSCCC
T ss_pred             HHHHHHHHHhCC-cccCCCC
Confidence            999999999877 5554443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=71.02  Aligned_cols=43  Identities=16%  Similarity=0.172  Sum_probs=21.8

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCS--SSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCCCCCCccCC--ccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            3344455555555  555555555555555555555 455555444

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=70.78  Aligned_cols=44  Identities=16%  Similarity=0.253  Sum_probs=27.1

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECS--SSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCCCCCCCeECC--CCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            44455666666666  666666666666666666666 666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.1e-13  Score=71.57  Aligned_cols=43  Identities=16%  Similarity=0.225  Sum_probs=25.0

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECT--TTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CcCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3445555556665  566666666666666666655 566665554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.3e-13  Score=71.42  Aligned_cols=42  Identities=14%  Similarity=0.218  Sum_probs=21.9

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         5 ~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            344555555555  555555555555555555555 555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.2e-13  Score=71.47  Aligned_cols=42  Identities=17%  Similarity=0.260  Sum_probs=20.9

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCT--TTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCcCCCCCeECC--CCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344444555555  455555555555555555554 455555443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.3e-13  Score=71.40  Aligned_cols=44  Identities=18%  Similarity=0.243  Sum_probs=23.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCCCCCCCEEcc--ccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            33445555555555  555555555555555555555 555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.37  E-value=1.1e-13  Score=71.65  Aligned_cols=43  Identities=16%  Similarity=0.113  Sum_probs=23.0

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCS--SSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             cCccCCCcCeECC--CCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=71.20  Aligned_cols=42  Identities=17%  Similarity=0.246  Sum_probs=21.0

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         5 ~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCS--SSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCCCCCcCCC--cCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            344444555555  455555555555555555555 455555443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.37  E-value=1.1e-13  Score=71.62  Aligned_cols=44  Identities=16%  Similarity=0.207  Sum_probs=24.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECS--SSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             cccCCCCCCceECC--CCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34445555555555  555555555555555555555 555555554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=71.16  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=20.8

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             cCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            344444455554  455555555555555555554 455555443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.37  E-value=8.7e-13  Score=74.64  Aligned_cols=59  Identities=14%  Similarity=0.411  Sum_probs=51.8

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC--CCCCcccccHHHHHHHHHhh
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY--KGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h  142 (148)
                      +...++|.|.+..|++.|.....|..|+++|++ ++||.|.+  |++  .|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k--~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCER--RFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-SCSEECCCTTCCC--EESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCC-CCCccCCCCCCCc--ccCCHHHHHhHhhcC
Confidence            456788999822399999999999999999999 99999975  998  799999999998775

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.4e-13  Score=71.27  Aligned_cols=43  Identities=21%  Similarity=0.254  Sum_probs=22.0

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECS--SSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCCCCCcCccCC--CccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3344455555555  555555555555555555555 555555444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=71.24  Aligned_cols=43  Identities=19%  Similarity=0.226  Sum_probs=23.5

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCT--TTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             ccccCCCCCeeCC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=70.74  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=21.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCC--CCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555  5555555555555555555555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2e-13  Score=70.65  Aligned_cols=42  Identities=14%  Similarity=0.131  Sum_probs=20.8

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         5 ~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCR--ECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECT--TTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             cccCCCCCEEcc--ccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344444455555  455555555555555555555 455555443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.37  E-value=1.5e-13  Score=71.11  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=23.9

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECS--SSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCCCCcCeECC--ccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.3e-13  Score=71.33  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=25.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECS--SSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CcCCCCCCCCeECC--cCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34445555555555  566666666666666555555 555655554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.36  E-value=2.1e-13  Score=70.58  Aligned_cols=43  Identities=14%  Similarity=0.167  Sum_probs=23.3

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +++|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECS--SSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-13  Score=71.08  Aligned_cols=42  Identities=19%  Similarity=0.286  Sum_probs=21.0

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBT--TTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCC--CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            34445555555555  5555555555555555555544555444

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.4e-13  Score=71.14  Aligned_cols=43  Identities=16%  Similarity=0.282  Sum_probs=23.4

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCT--TTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CcCCCCCcCcCCC--CCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=70.89  Aligned_cols=42  Identities=17%  Similarity=0.174  Sum_probs=20.9

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         5 ~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECS--SSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             ccCCCCCCeeCC--CCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344444555555  455555555555555555555 455555443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=70.68  Aligned_cols=44  Identities=20%  Similarity=0.349  Sum_probs=28.9

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEET--TTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             cccCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45556666666666  666666666666666666666 666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.6e-13  Score=70.99  Aligned_cols=43  Identities=14%  Similarity=0.195  Sum_probs=23.3

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECT--TTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             cccCCCCCCeECC--CcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.2e-13  Score=71.46  Aligned_cols=43  Identities=16%  Similarity=0.259  Sum_probs=22.9

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECS--SSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             CcCCCCCCCeECC--cCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            3445555555555  555555555555555555555 555555544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-13  Score=70.80  Aligned_cols=42  Identities=19%  Similarity=0.341  Sum_probs=21.5

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         5 ~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEET--TTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CccCCCcCeECC--CCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            344455555555  555555555555555555555 455555444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.2e-13  Score=70.52  Aligned_cols=42  Identities=17%  Similarity=0.320  Sum_probs=21.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      ++++|+++++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECS--SSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECc--ccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555  5555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-13  Score=71.16  Aligned_cols=43  Identities=19%  Similarity=0.258  Sum_probs=22.5

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEET--TTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CcCCCCCCCeECC--CCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            3344555555555  555555555555555555555 555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.1e-13  Score=70.55  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=23.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECS--SSCCEESSHHHHHHHHTTTTT-SCCCCTTC
T ss_pred             CCCCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            33445555555555  555555555555555555555 55555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.7e-12  Score=66.41  Aligned_cols=44  Identities=23%  Similarity=0.386  Sum_probs=41.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGPS--SG   44 (44)
T ss_dssp             CCCCCSSCCCEECS--SSSCEESSHHHHHHHHHHHTSSCSCSCC--CC
T ss_pred             CCCCcCCCcCccCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            57899999999999  9999999999999999999999999998  66

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.1e-13  Score=69.42  Aligned_cols=42  Identities=19%  Similarity=0.338  Sum_probs=23.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECS--SSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECC--cCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.4e-13  Score=71.23  Aligned_cols=44  Identities=14%  Similarity=0.256  Sum_probs=24.9

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECT--TTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34445555555555  555555555555555555555 555555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-12  Score=66.55  Aligned_cols=45  Identities=18%  Similarity=0.271  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESSHHHHHHHHHHHSCCCTTSSS--CC
T ss_pred             CCcCCcCCCCCeeCC--CCChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.32  E-value=2.4e-12  Score=66.50  Aligned_cols=45  Identities=18%  Similarity=0.334  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCCSSCC--CC
T ss_pred             CCCCccCCCCceECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.7e-13  Score=69.84  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=20.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHH-HhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++ .|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            3 SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cccccCCCCCEECC--ccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            34444444445444  45544444444444444 44444444444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.4e-12  Score=66.43  Aligned_cols=44  Identities=18%  Similarity=0.214  Sum_probs=41.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.+...|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CcccCCCCCCeECC--CCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            66789999999999  999999999999999999999 999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.4e-12  Score=66.43  Aligned_cols=45  Identities=18%  Similarity=0.310  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCSSCCEECS--SSCCEESSHHHHHHHHHHHTTSCCSCSS--CC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCcHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.31  E-value=1.2e-12  Score=82.27  Aligned_cols=58  Identities=26%  Similarity=0.457  Sum_probs=55.7

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      .|.++++|.|.  .|++.|.....|..|++.|  ++||.|.  .|++.|.....|..|+++|++
T Consensus        68 ~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~~~C~--~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           68 ASKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVCP--VCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHHCSEECT--TTCCEESSHHHHHHHHHHT--CCCCBCT--TTCCBCSSHHHHHHHHHHTTC
T ss_pred             HhCCCCCeECC--CCCcccCCHhHHHHHHHHC--CCCCCCC--CCCcccCCHHHHHHHHHHHCC
Confidence            57889999999  9999999999999999999  8899999  999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.31  E-value=2.2e-12  Score=66.63  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=41.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCCCCCCCCcccC--ccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            56789999999999  999999999999999999999 999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=67.07  Aligned_cols=45  Identities=24%  Similarity=0.373  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSSSSSCCEECS--SSCCEESCHHHHHHHGGGTSCSSCSCCC--CC
T ss_pred             ccccccCCCCCeECC--CCCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            478999999999999  9999999999999999999999999998  65

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.4e-12  Score=66.44  Aligned_cols=45  Identities=22%  Similarity=0.325  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSSSSCSEECS--SSCCEESSHHHHHHHHHHHSSSSCSSCC--CC
T ss_pred             CCcccCCCCCCEeCC--cCCCccCCHHHHHHHHHHHCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.3e-12  Score=66.50  Aligned_cols=45  Identities=22%  Similarity=0.365  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESCHHHHHHHHHHHHCCSCCSCC--CC
T ss_pred             CcccccCCCcCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-12  Score=66.64  Aligned_cols=45  Identities=24%  Similarity=0.323  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCSCSCCCSEECT--TTCCEESSHHHHHHHHHHHHCSSCSSSC--CC
T ss_pred             CCCCCCCCCCCcCCC--CCCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  65

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-12  Score=66.06  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSCCEESSHHHHHHHHHHHTCCCSSCSS--CC
T ss_pred             CCccccCCCcCeECC--CCCCeeCChHHHHHHHHHcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.9e-12  Score=66.13  Aligned_cols=45  Identities=27%  Similarity=0.377  Sum_probs=42.3

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGPS--SG   46 (46)
T ss_dssp             CSSCTTSSCCSEECS--SSCCEESSHHHHHHHHHHTSCCCCSSCS--CC
T ss_pred             CcccCCCCCcCeECC--CCChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  65

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.6e-12  Score=66.28  Aligned_cols=45  Identities=22%  Similarity=0.361  Sum_probs=42.3

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSSSCSSCCCSEECS--SSCCEESSHHHHHHHHHTTSSCCSCCSC--CC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.4e-12  Score=66.47  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGPS--SG   46 (46)
T ss_dssp             CCCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHHSTTSSCCS--CC
T ss_pred             CCCCCCCCCCCEEcc--ccCcccCCHHHHHHHHHHHcCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.4e-12  Score=66.47  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPS--SG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCCC--CC
T ss_pred             CCCcCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.9e-12  Score=66.10  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=42.3

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCSSSCC--CC
T ss_pred             CCCCCCCCCCCcCCC--cCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=66.48  Aligned_cols=45  Identities=18%  Similarity=0.341  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHGGGSSCCCSCSS--CC
T ss_pred             CccCCcCCCCCeeCC--CcCCccCCHHHHHHHHHHhcCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.5e-12  Score=65.77  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSSCCSC--CC
T ss_pred             CCCCCCCCCCCccCC--ccChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.4e-12  Score=65.86  Aligned_cols=44  Identities=25%  Similarity=0.331  Sum_probs=41.7

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECS--SSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCC--CCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            56789999999999  999999999999999999999 999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.30  E-value=2.4e-12  Score=66.42  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSCSSCTTSCCEECS--SSCCEESSHHHHHHHHTGGGCCCCCSSS--CC
T ss_pred             CCccCCCCCcCcCCC--CCcchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=66.56  Aligned_cols=45  Identities=20%  Similarity=0.288  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSCCCSSSEECS--SSCCEESSHHHHHHHHTTTCCCCCCSCC--CC
T ss_pred             CcccCCCCCCCeECC--CCCchhCChHHHHHHHhhcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=66.58  Aligned_cols=45  Identities=22%  Similarity=0.309  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCT--TTCCBCSSHHHHHHHGGGTSCCCCCSCC--CC
T ss_pred             CCCcCCCCCcCeECC--CCCCeeCCHHHHHHHhhhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=66.45  Aligned_cols=45  Identities=18%  Similarity=0.306  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCT--TTCCCBSSHHHHHHHHTTTTTCCCCSSC--CC
T ss_pred             CCCCCcCCCCCeECC--CCCceeCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            478999999999999  9999999999999999999999999998  66

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4e-12  Score=65.59  Aligned_cols=45  Identities=18%  Similarity=0.277  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKNSGPS--SG   46 (46)
T ss_dssp             CCSCCSSCCCCEECT--TTCCEESSHHHHHHHHHHHSCCSCCCTT--CC
T ss_pred             CcccccCCCCCEEcc--ccChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2e-12  Score=67.45  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=31.4

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGV  125 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~  125 (148)
                      |.++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|++
T Consensus         7 ~~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACE--ICGKIFRDVYHLNRHKLSHSG-EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEET--TTTEEESSHHHHHHHGGGSCS-CCCCCSCCCCC
T ss_pred             CCCCcCeeCC--CCCcccCCHHHHHHHHHhcCC-CCCccCCCCCC
Confidence            4566777777  777777777777777777777 77777777774

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2.8e-12  Score=65.87  Aligned_cols=41  Identities=22%  Similarity=0.399  Sum_probs=26.4

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG  124 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~  124 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++ +++|.|+.||
T Consensus         5 h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDG-SVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEET--TTTEECSCHHHHHHHHHHHSC-CCCCCCCCCC
T ss_pred             cCCCCCCcCC--CCCcccCCHHHHHHHHHHccC-CCCCCCcCCC
Confidence            5566666666  666666666666666666666 6666666664

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-12  Score=66.41  Aligned_cols=45  Identities=22%  Similarity=0.358  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPS--SG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCSC--CC
T ss_pred             CCCCCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.2e-12  Score=65.92  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCCSEECS--SSCCEESSSHHHHHHHHHCCSCCCSCCC--CC
T ss_pred             cCcccCCCCCCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.5e-12  Score=66.35  Aligned_cols=45  Identities=22%  Similarity=0.312  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPS--SG   46 (46)
T ss_dssp             CCSSCCCCCCSSEET--TTTEECSSHHHHHHHHGGGSCCCSCSSC--CC
T ss_pred             CCCCCCCCCCCeECC--CcChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.29  E-value=2.4e-12  Score=66.41  Aligned_cols=45  Identities=20%  Similarity=0.419  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCS--SSCCCCSSHHHHHHHGGGGSSSSCSCSS--CC
T ss_pred             CCcCccCCCcCeECC--CCCcccCCHHHHHHHHHHcCCCCCcCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.3e-13  Score=68.26  Aligned_cols=42  Identities=26%  Similarity=0.366  Sum_probs=26.0

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECS--SSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45566666666666  6666666666666666666666666654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=2.3e-12  Score=66.48  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSSCEESSHHHHHHHGGGSSSCCCSCCT--TC
T ss_pred             ccccCCCCCCceECC--CCCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.6e-12  Score=66.31  Aligned_cols=44  Identities=20%  Similarity=0.326  Sum_probs=41.9

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCTTCCCCEECT--TTCCEESSHHHHHHHHTTTCCCCCSCCS--CC
T ss_pred             CCcCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            78899999999999  9999999999999999999999999998  66

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3e-12  Score=66.11  Aligned_cols=44  Identities=16%  Similarity=0.220  Sum_probs=41.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBT--TTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCC--CCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            56779999999999  999999999999999999999 999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.5e-12  Score=66.34  Aligned_cols=45  Identities=18%  Similarity=0.327  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCSSSCCCSEECS--SSCCEESCHHHHHHHGGGGTTCCCSSTT--CC
T ss_pred             CCCCCCCCCcCccCC--CccchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.29  E-value=8.8e-13  Score=66.75  Aligned_cols=39  Identities=18%  Similarity=0.350  Sum_probs=22.1

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      +.|+++++|.|.  .|++.|.+...|..|+++|++ ++||.|
T Consensus         3 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECS--ECGKAFNRKDQLISHQRTHAG-ESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECS--SSCCEESSHHHHHHHHGGGCC-CCSCCC
T ss_pred             CCCCCCCCccCC--CcChhhCCHHHHHHHHHhcCC-CCCCCC
Confidence            345555555555  555555555555555555555 555555

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.8e-12  Score=66.16  Aligned_cols=45  Identities=20%  Similarity=0.281  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGPS--SG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCT--TTCCBCSSHHHHHHHHTTTTTSCCSCCC--CC
T ss_pred             CCccccCCCCCeeCC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.2e-12  Score=65.94  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~h~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCSCCCCSSCCEEET--TTTEEESSHHHHHHHHHHHSSCCCSSSC--CC
T ss_pred             CCCCccCCCcCeECC--CCCcccCchHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.8e-12  Score=65.70  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=41.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECS--SSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCCCCCCCCeECc--ccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            56779999999999  999999999999999999999 999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.6e-12  Score=65.69  Aligned_cols=45  Identities=18%  Similarity=0.262  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCTTCCCCSEECS--SSCCEESSHHHHHHHHGGGCCCSCCSSC--CC
T ss_pred             CCCCCCCCCCCeECC--CCChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.29  E-value=8.9e-13  Score=68.13  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=25.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECS--SSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45556666666666  6666666666666666666665665554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.6e-12  Score=68.17  Aligned_cols=42  Identities=21%  Similarity=0.458  Sum_probs=25.0

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDYKGV  125 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~  125 (148)
                      |+++++|.|.  .|++.|.....|..|++ +|++ ++||.|.+|++
T Consensus         7 ~~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k   49 (54)
T 2eps_A            7 GSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVS   49 (54)
T ss_dssp             CCSSCCEECS--SSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCC
T ss_pred             CCCCCCeECC--CCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCC
Confidence            4455556666  56666666666666654 5665 56666666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3e-12  Score=66.01  Aligned_cols=45  Identities=20%  Similarity=0.350  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCSSEECT--TTCCEESSHHHHHHHHTTTCCSCSSCCS--CC
T ss_pred             CccccCCCCCCeECC--CcCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.28  E-value=4e-12  Score=65.62  Aligned_cols=45  Identities=18%  Similarity=0.315  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGPS--SG   46 (46)
T ss_dssp             CSCCSSCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSSCCSCC--CC
T ss_pred             CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            368899999999999  9999999999999999999999999998  66

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.5e-12  Score=66.36  Aligned_cols=45  Identities=22%  Similarity=0.315  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCSSEECS--SSCCEESSSHHHHHHTHHHHSCCCSCSC--CC
T ss_pred             CcCcCCCCCCCeECC--cCCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.9e-12  Score=66.09  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCT--TTCCCCSSHHHHHHHHTTTTTCSCCCSC--CC
T ss_pred             CCCcCCCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=3.1e-12  Score=65.96  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSGEKPSGPS--SG   46 (46)
T ss_dssp             CSCCSCCCCCSEECS--SSCCEESSHHHHHHHGGGGTSCCCCSTT--CC
T ss_pred             CCCCCCCCCcCeECC--ccccccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.1e-12  Score=66.06  Aligned_cols=45  Identities=20%  Similarity=0.301  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCSCSEECS--SSCCEESSHHHHHHHHTTTSCSCCSSCC--CC
T ss_pred             CCcCCCCCCCCeECC--cCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.6e-12  Score=64.78  Aligned_cols=44  Identities=18%  Similarity=0.337  Sum_probs=41.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECS--SSCCEESSHHHHHHHHHHHCC-CCSSCSSCC
T ss_pred             CCCCCCCCCCEECC--cCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            56789999999999  999999999999999999999 999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.28  E-value=8e-13  Score=70.75  Aligned_cols=51  Identities=16%  Similarity=0.159  Sum_probs=39.1

Q ss_pred             ccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         65 NKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        65 ~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      ++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++|++ ++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLELRHF-AKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHHHHTT-TSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHHHhcc-CCCC
Confidence            35566666677777788888888888  788888888888888888887 7776

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=67.62  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=22.8

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECS--SSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.2e-12  Score=67.58  Aligned_cols=42  Identities=21%  Similarity=0.426  Sum_probs=24.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECT--TSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeecc--ccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            45555555566665  5666666655566665555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=67.86  Aligned_cols=42  Identities=24%  Similarity=0.393  Sum_probs=21.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECS--SSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECC--cCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555  5555555555555555555555555543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.2e-12  Score=67.57  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=23.9

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECT--TTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCC--CCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            45555555555555  5555555555555555555555555554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.1e-12  Score=65.53  Aligned_cols=43  Identities=26%  Similarity=0.385  Sum_probs=41.1

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      .|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECS--SSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            378899999999999  9999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3e-12  Score=66.05  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=42.6

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEEET--TTTEEESCHHHHHHHHTTSCSCCSSCCS--CC
T ss_pred             CCCcCCCCCCCeECC--CCCCccCCHHHHHHHHHhhCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=67.83  Aligned_cols=42  Identities=24%  Similarity=0.323  Sum_probs=23.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCS--SSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECC--CCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=67.66  Aligned_cols=41  Identities=15%  Similarity=0.232  Sum_probs=22.3

Q ss_pred             HhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         80 RHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        80 ~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      .|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         6 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECS--SSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCCeeCc--ccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            34555555555  555555555555555555555 555555544

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=67.32  Aligned_cols=42  Identities=24%  Similarity=0.404  Sum_probs=21.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECS--SSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCC--CCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=67.50  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=23.9

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECS--SSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.7e-12  Score=65.72  Aligned_cols=45  Identities=24%  Similarity=0.383  Sum_probs=42.4

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSTTCCCCCCSEEET--TTTEEESSHHHHHHHGGGGSCCCCSCCC--CC
T ss_pred             CcccCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            378899999999999  9999999999999999999999999998  66

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=65.73  Aligned_cols=40  Identities=20%  Similarity=0.353  Sum_probs=20.7

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      +++|.++++|.|.  .|++.|.....|..|++.|+++++|.|
T Consensus         2 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCT--TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3445555555555  555555555555555555555555444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=5.6e-12  Score=70.16  Aligned_cols=61  Identities=25%  Similarity=0.500  Sum_probs=54.8

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCc
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAP  117 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~  117 (148)
                      .-++++|.|.  .|++.|. ...|..|++. ++++||.|.. .|++.|.....|..|+++|.. .++
T Consensus         5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~-~C~k~f~~~~~L~~H~~~hc~-~~~   65 (66)
T 2eod_A            5 SSGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPN-QCGVGTVAREDLPGHLKDSCN-TAL   65 (66)
T ss_dssp             CCCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTT-CCSCCEEETTTHHHHHHTTSS-SCC
T ss_pred             cCCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCc-ccCcccccHHHHHHHHHhhcc-cCc
Confidence            4467899999  9999999 9999999999 9999999973 499999999999999999987 554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=67.60  Aligned_cols=42  Identities=24%  Similarity=0.375  Sum_probs=24.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCT--TTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555555555555  5555555555555555555555555554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.26  E-value=8.1e-12  Score=64.42  Aligned_cols=43  Identities=21%  Similarity=0.319  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECS--SSSCEESSHHHHHHHHHHHTT-SCSSSSCC
T ss_pred             CCCCCCCCCCEECC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=67.58  Aligned_cols=41  Identities=17%  Similarity=0.297  Sum_probs=23.1

Q ss_pred             HhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         80 RHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        80 ~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      .|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+|
T Consensus         6 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCS--SSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555555555  555555555555555555555 555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=67.37  Aligned_cols=42  Identities=21%  Similarity=0.391  Sum_probs=21.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCC--CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44445555555555  5555555555555555555555555543

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=67.53  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=21.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECS--SSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECC--CCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            34445555555555  5555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=67.10  Aligned_cols=42  Identities=26%  Similarity=0.441  Sum_probs=25.3

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCT--TTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45556666666666  6666666666666666666666666554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=8e-12  Score=64.45  Aligned_cols=43  Identities=19%  Similarity=0.267  Sum_probs=40.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTG-EKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECS--SSCCEESSHHHHHHHHHHHSS-SSCCCCCC
T ss_pred             CccccCCCcCcCCC--CCCCccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=67.37  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=23.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCS--SSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=67.57  Aligned_cols=42  Identities=21%  Similarity=0.345  Sum_probs=21.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34445555555555  5555555555555555555555555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=6.8e-12  Score=63.37  Aligned_cols=42  Identities=21%  Similarity=0.389  Sum_probs=39.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECS--SSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCC--CcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57889999999999  9999999999999999999999999984

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=67.64  Aligned_cols=42  Identities=24%  Similarity=0.333  Sum_probs=22.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCS--SSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECC--CCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=67.34  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=20.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCC--CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444445555555  4555555555555554445444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.9e-12  Score=65.16  Aligned_cols=44  Identities=16%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCDYK  123 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c  123 (148)
                      |++.|+++++|.|.  .|++.|.....|..|++ +|++ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             cccccCCCCCEECC--ccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            56789999999999  99999999999999999 9999 999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=67.13  Aligned_cols=42  Identities=19%  Similarity=0.396  Sum_probs=29.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCS--SSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56666667777777  7777777777777777777766666665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=67.19  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=21.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECS--SSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34445555555555  5555555555555555555555555443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.1e-11  Score=62.60  Aligned_cols=42  Identities=14%  Similarity=0.208  Sum_probs=39.0

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |+++|++++||.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCA--ECKETFSDNNRLVQHQKMHTV-KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCT--TTCCBCSSHHHHHHHHHHTSC-CSSCCCC
T ss_pred             CCcCcCCCCCeECC--CCCCccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            45679999999999  999999999999999999999 9999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=67.37  Aligned_cols=42  Identities=26%  Similarity=0.428  Sum_probs=23.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCT--TTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECC--cCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-12  Score=67.66  Aligned_cols=42  Identities=21%  Similarity=0.342  Sum_probs=24.1

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCS--SSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCC--CCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            45555555555555  5555555555555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=8.5e-12  Score=66.68  Aligned_cols=49  Identities=18%  Similarity=0.320  Sum_probs=45.1

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHH-HhcCCCceecCcCCcccccCC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKPLTLCCEELGCGRKFQT  100 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~~~C~~~f~~  100 (148)
                      ...|.++++|.|.  .|++.|.....|..|++ .|+++++|.|.  .|++.|.+
T Consensus         4 ~~~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSS--SSCCSSCC
T ss_pred             CCCCCCCCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccCC--CCCCCCCC
Confidence            3457889999999  99999999999999997 89999999999  99999976

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-12  Score=66.23  Aligned_cols=45  Identities=16%  Similarity=0.295  Sum_probs=42.5

Q ss_pred             CCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         46 TGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        46 ~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .|+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEECT--TTCCEESSSHHHHTTGGGGSSCCSSCSC--CC
T ss_pred             CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            478899999999999  9999999999999999999999999998  66

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=65.82  Aligned_cols=41  Identities=27%  Similarity=0.471  Sum_probs=21.3

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECT--TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECC--CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34455555555555  555555555555555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=66.80  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=23.0

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEET--TTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555  5555555555555555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.1e-11  Score=63.78  Aligned_cols=43  Identities=19%  Similarity=0.284  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECT--TSCCEESSHHHHHHHHHHHCC-CSCSCTTC
T ss_pred             ccCCCCCCCCeecc--ccCChhcCHHHHHHHHHHcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1e-11  Score=64.02  Aligned_cols=43  Identities=12%  Similarity=0.187  Sum_probs=40.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTG-ERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCS--SSCCCCSSHHHHHHHHHHCSS-CCSCSTTC
T ss_pred             CCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=66.81  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=20.7

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYK  123 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c  123 (148)
                      |+++++|.|.+..|++.|.....|..|+++|++ ++||.|.+|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            444445555322355555555555555555555 555555444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-11  Score=62.92  Aligned_cols=42  Identities=14%  Similarity=0.231  Sum_probs=39.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECT--TTCCEESCHHHHHHHHHHTTT-SSCSCCC
T ss_pred             CccCCCCCCCeECC--CCCcccCCHhHHHHHHHHhCC-CCCCCCC
Confidence            66789999999999  999999999999999999999 9999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=65.88  Aligned_cols=41  Identities=20%  Similarity=0.416  Sum_probs=21.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECS--SSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECC--CCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            34445555555555  555555555555555555555555544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-11  Score=63.57  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECS--SSCCEESSHHHHHHHHHHHCC-CCCCCSCC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-11  Score=63.84  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=26.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECS--SSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECc--ccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            45566666666666  6666666666666666666666666654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=66.67  Aligned_cols=43  Identities=14%  Similarity=0.193  Sum_probs=39.9

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|++++||.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yto_A            3 SGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTG-ERHSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCEECS--SSCCEESSHHHHHHHHHHHTC-CCBTTTBC
T ss_pred             cccccCCCCCEECc--ccCCccCCHhHHHHHHHHcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999963

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=66.29  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=20.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEET--TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCC--CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555  555555555555555555554444444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=66.09  Aligned_cols=41  Identities=22%  Similarity=0.386  Sum_probs=20.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECC--CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            34445555555555  555555555555555555555555444

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.4e-12  Score=64.16  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECS--SSCCEESSHHHHHHHHTTTSC-CCCCSSCC
T ss_pred             cccCcCCCCCeECC--cCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.22  E-value=1.4e-11  Score=62.10  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=23.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECS--SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECC--CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34555555556665  566666655556556555555555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=63.47  Aligned_cols=43  Identities=14%  Similarity=0.237  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 h~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCT--TTCCBCSSHHHHHHHHHHHTS-SCCCSCCC
T ss_pred             CCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-11  Score=63.84  Aligned_cols=43  Identities=19%  Similarity=0.256  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTG-ERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCT--TTCCBCSSHHHHHHHHTTTSC-CCCSCSCC
T ss_pred             CCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-11  Score=63.94  Aligned_cols=43  Identities=16%  Similarity=0.213  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCS--SSCCBCSSHHHHHHHHTTTTT-SSCCCCSC
T ss_pred             CCcCCCCCcCeECC--CCCcccCCHHHHHHHHHhhCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.7e-12  Score=62.98  Aligned_cols=41  Identities=20%  Similarity=0.435  Sum_probs=23.8

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT--TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44555555666665  566666666556666555555555554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2e-12  Score=66.79  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=24.8

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCS--SSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555566666666  5666666666666666566555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=63.64  Aligned_cols=43  Identities=21%  Similarity=0.284  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECT--TTCCEESSHHHHHHHHHHHHS-CCCSSSTT
T ss_pred             CCcCcCCCcCccCC--CCCCCcCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.3e-11  Score=63.58  Aligned_cols=43  Identities=16%  Similarity=0.249  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECS--SSCCEESSHHHHHHHHHTSCS-SSSSCCCC
T ss_pred             CCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=63.78  Aligned_cols=43  Identities=19%  Similarity=0.236  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECS--SSCCEESSHHHHHHHHGGGCS-CCCCSCCC
T ss_pred             CCcccCCCCCCCCC--CCCcccCCHHHHHHHHhHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=63.74  Aligned_cols=43  Identities=16%  Similarity=0.240  Sum_probs=40.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQ-ETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEET--TTTEEESSHHHHHHHHHHHSS-CCSSSCCC
T ss_pred             ccccCCCCCCeECc--ccChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.21  E-value=3.3e-12  Score=64.54  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=37.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECS--SSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCccCCCCCCeECC--CCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            45678899999999  999999999999999999999 999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=63.49  Aligned_cols=43  Identities=19%  Similarity=0.273  Sum_probs=40.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTG-ENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHGGGSS-SCCCSSSC
T ss_pred             cccCCCCCCCcCCC--CCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.1e-11  Score=63.15  Aligned_cols=42  Identities=14%  Similarity=0.274  Sum_probs=39.6

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTG-ESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHTTTCC-SSSSCCC
T ss_pred             CCcCCCCCcCeECC--CCCCccCCHHHHHHHhhhcCC-CCCCCCC
Confidence            66789999999999  999999999999999999999 9999985

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=2.8e-13  Score=74.70  Aligned_cols=43  Identities=9%  Similarity=0.264  Sum_probs=22.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGV  125 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~  125 (148)
                      |++.|++++||.|.  .|++.|.....|.   ++|++ ++||.|..||+
T Consensus         5 h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k   47 (62)
T 1vd4_A            5 DERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPM-TGTFRCTFCHT   47 (62)
T ss_dssp             CSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETT-TTEEBCSSSCC
T ss_pred             HHHHcCCCCCccCC--CCCchhccHHHhH---hhcCC-CCCEECCCCCC
Confidence            44445555555555  5555555554443   45555 55555555554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.7e-11  Score=62.58  Aligned_cols=42  Identities=14%  Similarity=0.208  Sum_probs=39.5

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|++++||.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHAR-KSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECS--SSSCEESSSHHHHHHHHHCCC-CCSSCCC
T ss_pred             CccccCCCCCeECC--CCCchhCCHHHHHHHhHhcCC-CCCCCCC
Confidence            66789999999999  999999999999999999999 9999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=63.59  Aligned_cols=43  Identities=19%  Similarity=0.284  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCS--SSCCBCSSHHHHHHHHTTTSS-SCCCCTTC
T ss_pred             CccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=9.2e-12  Score=63.52  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=39.7

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |+++|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSG-QSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEET--TTTEECSSHHHHHHHHTTSSS-SCSCCCC
T ss_pred             CccccCCCcCeeCC--CCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            67789999999999  999999999999999999999 9999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.2e-12  Score=65.27  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=37.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |++.|++++||.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT--TTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            45678899999999  999999999999999999999 899987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.6e-11  Score=63.77  Aligned_cols=46  Identities=17%  Similarity=0.297  Sum_probs=42.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      +.++|+++++|.|.++.|++.|.....|..|++.|++++||.|.  .|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS--SG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC--CC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            57789999999998668999999999999999999999999998  66

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.9e-12  Score=65.47  Aligned_cols=41  Identities=17%  Similarity=0.391  Sum_probs=19.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECS--KCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECT--TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34444444444444  444444444444444444444444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=63.80  Aligned_cols=43  Identities=16%  Similarity=0.290  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGGGGCC-CCCCCCCC
T ss_pred             cccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=1.9e-11  Score=62.70  Aligned_cols=44  Identities=23%  Similarity=0.479  Sum_probs=41.2

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcc
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCG   95 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~   95 (148)
                      ..+|+++++|.|.  .|++.|.....|..|++.|+++++|.|+  .||
T Consensus         2 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~cg   45 (45)
T 2epq_A            2 SSGSSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSGP--SSG   45 (45)
T ss_dssp             CCCCSSCCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCCC--CCC
T ss_pred             CCCcCCCCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCCc--CCC
Confidence            3578999999999  9999999999999999999999999999  886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=65.99  Aligned_cols=42  Identities=21%  Similarity=0.384  Sum_probs=21.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEET--TTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECC--CCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555543

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=63.70  Aligned_cols=43  Identities=19%  Similarity=0.282  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCT--TTTCCCSSHHHHHHHHTTTCC-SCCSSCCC
T ss_pred             cccccCCCCCeECC--cCChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.8e-12  Score=66.22  Aligned_cols=42  Identities=19%  Similarity=0.349  Sum_probs=24.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCT--TTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555566665  5666665555555565555555555554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=63.55  Aligned_cols=43  Identities=16%  Similarity=0.275  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECS--SSCCEESSHHHHHHHGGGTSS-CCSSCCCC
T ss_pred             CCCCCCCCcCEECC--CCChhhCChHHHHHHHHhcCC-CCCcCCCC
Confidence            66789999999999  999999999999999999999 99999975

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.5e-12  Score=64.78  Aligned_cols=41  Identities=22%  Similarity=0.291  Sum_probs=23.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44555555555555  555555555555555555555555555

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=63.64  Aligned_cols=43  Identities=16%  Similarity=0.229  Sum_probs=40.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCS--SSCCCCSSHHHHHHHHTTTSC-SCCSSTTC
T ss_pred             CCcCCCCCcCeECC--CCCcccCChhHHHHHhHhcCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.31  Aligned_cols=43  Identities=16%  Similarity=0.266  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECS--SSCCEESSHHHHHHHHTTTSS-CCSSCSCC
T ss_pred             CccCCCCCCCeECC--CCCCccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.39  Aligned_cols=43  Identities=19%  Similarity=0.357  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGGGGTT-CCCSSCCC
T ss_pred             cccCCCCCcCCCCC--CCCcccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.3e-11  Score=62.04  Aligned_cols=42  Identities=17%  Similarity=0.223  Sum_probs=39.1

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         3 h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAG-ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTT-SCCCCCC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHHCC-CCCCCCC
Confidence            45678999999999  999999999999999999999 9999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=63.57  Aligned_cols=43  Identities=19%  Similarity=0.273  Sum_probs=40.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSR-EKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCS--SSCCCCSSHHHHHHHHHHHHH-TTCCCSCC
T ss_pred             CCcCCCCCCCeECC--CCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=63.14  Aligned_cols=44  Identities=20%  Similarity=0.300  Sum_probs=41.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .+++|+++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         3 ~~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSTTCCSEECS--SSCCEESSHHHHHHHHTTTSSSCCCSCC--CC
T ss_pred             CCCCCCCCCCeeCc--ccCcccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            46789999999999  9999999999999999999999999998  66

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.5e-11  Score=62.73  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         76 MHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        76 ~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      .|++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECS--KCQATFNLRKHLIQHQKTHAA-KSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECT--TTCCEESCHHHHHHHGGGGCC-CCCTTCC
T ss_pred             CcccccCCCCCeECC--CCCCccCCHHHHHHHHHHcCC-CCCcCCC
Confidence            366789999999999  999999999999999999999 9999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=63.77  Aligned_cols=43  Identities=19%  Similarity=0.250  Sum_probs=40.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSG-ERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCS--SSCCBCSSHHHHHHHTTTTTS-CCSCTTSC
T ss_pred             CCCCCCCCcccCCC--CCCcccCcHHHHHHHHHhcCC-CCCCCCCC
Confidence            56789999999999  999999999999999999999 99999975

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2e-12  Score=65.40  Aligned_cols=40  Identities=20%  Similarity=0.356  Sum_probs=19.1

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      +++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCT--TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCC--CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444444444  444444444444444444444444443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.7e-12  Score=64.95  Aligned_cols=41  Identities=24%  Similarity=0.393  Sum_probs=21.0

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCS--SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECC--CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34445555555555  555555555555555555555555443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.9e-12  Score=66.12  Aligned_cols=42  Identities=17%  Similarity=0.332  Sum_probs=22.7

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECS--SSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555  5555555555555555555555555553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.2e-11  Score=63.74  Aligned_cols=44  Identities=18%  Similarity=0.400  Sum_probs=41.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGC   94 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C   94 (148)
                      .+++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGPS--SG   46 (46)
T ss_dssp             CSSSCSCCCTTCCS--SSCCCCSSHHHHHHHHTHHHHCCCCSCC--CC
T ss_pred             CCCCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            36789999999999  9999999999999999999999999998  66

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1e-11  Score=62.63  Aligned_cols=41  Identities=22%  Similarity=0.446  Sum_probs=38.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCT--TTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             CccccCCCCCeeCC--CccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            56779999999999  999999999999999999999 999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.3e-11  Score=62.34  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=38.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |++.|++++||.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCS--SSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcccCCCCCEECC--CCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            45678999999999  999999999999999999999 999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=63.23  Aligned_cols=43  Identities=16%  Similarity=0.218  Sum_probs=39.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..
T Consensus         3 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCT--TTCCBCSSSHHHHHHGGGSCC-SCCCCCCC
T ss_pred             CCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            45679999999999  999999999999999999999 99999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=62.94  Aligned_cols=43  Identities=19%  Similarity=0.267  Sum_probs=40.3

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTG-KKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEET--TTTEECSSHHHHHHHHTTSCC-CCCCCSCC
T ss_pred             cccCCCCCCCeECC--CCChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            66789999999999  999999999999999999999 99999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=63.16  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=39.8

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECS--SSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             cccccCCCCCeeCc--ccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            66789999999999  999999999999999999999 9999996

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=63.82  Aligned_cols=41  Identities=22%  Similarity=0.285  Sum_probs=24.0

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      +++|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCS--SSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCC--CCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4455555566665  6666666666666665556555555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.2e-11  Score=62.75  Aligned_cols=42  Identities=21%  Similarity=0.403  Sum_probs=35.0

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcC-CCceecC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK-PLTLCCE   90 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~-~~~~~c~   90 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECS--SSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67788888888888  888888888888888888888 8888875

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4e-12  Score=64.96  Aligned_cols=41  Identities=22%  Similarity=0.449  Sum_probs=20.5

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555  555555555555555555555544444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=63.48  Aligned_cols=40  Identities=23%  Similarity=0.352  Sum_probs=19.2

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCcee
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLC   88 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~   88 (148)
                      |+++|+++++|.|.  .|++.|.....|..|++.|++++||.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            3 SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCSEECS--SSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCcccCCCcCeECC--CCCcccCchHHHHHHHhHhcCCCCCC
Confidence            34444444444444  44444444444444444444444443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=6.8e-11  Score=70.14  Aligned_cols=55  Identities=24%  Similarity=0.373  Sum_probs=50.1

Q ss_pred             ceecCcCCcccccCChHHHHHHHHH-hcCCCCc--------eeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKE-HSNVSAP--------YMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~-h~~~~k~--------~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      .+.|.  .|++.|.....|..|+++ |.+ +++        |.|.+|++  .|.....|..|+++|++.
T Consensus        25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k--~f~~~~~L~~H~~~H~~~   88 (95)
T 2ej4_A           25 SRPKK--SCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGK--SFKAKYKLVNHIRVHTGE   88 (95)
T ss_dssp             SSSCC--CCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTC--CCSSHHHHHHHHHHHHTC
T ss_pred             CCccc--ccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCc--ccCCHHHHHHHHHhcCCC
Confidence            35799  999999999999999998 998 887        99999998  699999999999999853

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=4.3e-11  Score=60.79  Aligned_cols=38  Identities=11%  Similarity=0.208  Sum_probs=18.9

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         5 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCN--ECDCRFSEEASLKRHTLQTHS-DKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCS--SSCCCBSSHHHHHHHHHHHTC-TTCSSSC
T ss_pred             cCCCCCEECC--CCCCeeCChHHHHHHHHhhCC-CCCccCC
Confidence            4444455555  455555555555555555554 4555443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.7e-11  Score=61.18  Aligned_cols=42  Identities=17%  Similarity=0.246  Sum_probs=39.0

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.+
T Consensus         4 ~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCS--SSCCCCSSHHHHHHHHHHHSS-CCCSSCCC
T ss_pred             CCCCCCCCCcCCC--CCCCeeCChHHHHHHHHHhCC-CCCCCCCC
Confidence            3568899999999  999999999999999999999 99999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2e-11  Score=62.22  Aligned_cols=42  Identities=17%  Similarity=0.316  Sum_probs=39.4

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTR-KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCC-CCCCSCC
T ss_pred             CCcCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            56789999999999  999999999999999999999 9999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.1e-12  Score=63.93  Aligned_cols=39  Identities=23%  Similarity=0.351  Sum_probs=18.9

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      ++|.++++|.|.  .|++.|.....|..|++.|+++++|.|
T Consensus         5 ~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            5 SSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCSCCSEEET--TTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCcCccCC--CCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            344444445444  454444444444444444444444444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.3e-11  Score=60.72  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAG-VSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECS--SSCCEESSHHHHHHHHGGGSS-CSCCCCC
T ss_pred             CCcccCCCcCeECC--CCCcccCchHHHHHHHhHhcC-CCCCCCC
Confidence            66789999999999  999999999999999999999 9999873

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=8.2e-11  Score=59.70  Aligned_cols=41  Identities=20%  Similarity=0.328  Sum_probs=38.7

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      .++|+++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         2 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            2 SSGSSGNGAFFCN--ECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSCCSSSCCBCCS--SSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCcCCCCCEECC--CCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4678999999999  9999999999999999999999999996

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.3e-11  Score=63.65  Aligned_cols=44  Identities=16%  Similarity=0.169  Sum_probs=37.7

Q ss_pred             HHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         77 HMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        77 h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      |++.|++++||.|.  .|++.|.....|..|+++|+++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECS--SSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778899999999  999999999999999999986348898864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=61.06  Aligned_cols=41  Identities=17%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             HHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCC
Q psy11070         79 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDY  122 (148)
Q Consensus        79 ~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~  122 (148)
                      +.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|++
T Consensus         5 ~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTG-EKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEET--TTTEEESSHHHHHHHHTTTSS-CCCCCSCC
T ss_pred             CCCCCCcCccCC--CCCCccCChHHHHHHHHHhCC-CCCCCCCC
Confidence            468899999999  999999999999999999999 99999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=4.3e-11  Score=62.25  Aligned_cols=44  Identities=16%  Similarity=0.322  Sum_probs=40.8

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCccc
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGR   96 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~   96 (148)
                      ..|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|++
T Consensus         5 ~~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSSG--PSSG   48 (48)
T ss_dssp             SCCCCCCSEEET--TTTEEESSHHHHHHHGGGSCSCCCCCSC--CCCC
T ss_pred             CCCCCCcCeeCC--CCCcccCCHHHHHHHHHhcCCCCCccCC--CCCC
Confidence            357788999999  9999999999999999999999999999  9985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=6.5e-11  Score=59.36  Aligned_cols=37  Identities=22%  Similarity=0.447  Sum_probs=19.8

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++ ++||.|
T Consensus         5 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQ--ECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             CCCCCCEECS--SSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             cCCCCCeECC--CCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            4455555555  555555555555555555555 555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=1.9e-11  Score=67.27  Aligned_cols=53  Identities=21%  Similarity=0.399  Sum_probs=46.9

Q ss_pred             cCCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHH
Q psy11070         45 STGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQY  104 (148)
Q Consensus        45 ~~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l  104 (148)
                      ..|+++|.++++|.|.  .|++.|.....|.   +.|++++||.|.  .|++.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~--~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCT--FCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCS--SSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEECC--CCCCccccCccc
Confidence            3578899999999999  9999999888875   789999999999  999999877654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.9e-12  Score=72.38  Aligned_cols=63  Identities=10%  Similarity=0.132  Sum_probs=30.9

Q ss_pred             HHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCCC
Q psy11070         76 MHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKYP  146 (148)
Q Consensus        76 ~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~~  146 (148)
                      .|+..|.+++++.|.  .|++.| ....|..|+ .|.+ ++||.|..|++  .|. ...|..|+++|.+.+
T Consensus         7 ~H~~~~c~~r~~~C~--~C~~~~-~~~~L~~H~-~~c~-~~~~~C~~C~~--~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            7 GHEETECPLRLAVCQ--HCDLEL-SILKLKEHE-DYCG-ARTELCGNCGR--NVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCCCCCEECS--SSCCEE-CHHHHHHHH-HHHH-HCEEECSSSCC--EEE-TTGGGTHHHHBTTBS
T ss_pred             hhCcccCCCcccCCc--ccChHh-hHHHHHHHH-hHcC-CCceEcccCCC--cCc-HHHHHHHHHHccCCc
Confidence            344444455555555  555555 245555555 4555 55555555554  233 244555555554443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.09  E-value=2.3e-11  Score=64.95  Aligned_cols=48  Identities=4%  Similarity=-0.002  Sum_probs=43.5

Q ss_pred             ccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         95 GRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        95 ~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      ++.|.....|..|+++|++ ++||.|.+||+  .|...+.|..|+++|++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~-~k~~~C~~C~k--~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQS-EQPATCPICYA--VIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTS-SCCEECTTTCC--EESSHHHHHHHHHHHTTT
T ss_pred             ccccCCCcchhhHHHhcCC-CCCccCCCCCc--ccCCHHHHHHHHHHhccC
Confidence            3578888889999999999 99999999998  699999999999999863

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=59.55  Aligned_cols=40  Identities=23%  Similarity=0.400  Sum_probs=36.6

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceec
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCC   89 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c   89 (148)
                      .++|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         2 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECS--SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCccCCCCCeECC--CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3578899999999  999999999999999999999999887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=1.1e-10  Score=64.82  Aligned_cols=40  Identities=23%  Similarity=0.353  Sum_probs=21.1

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHH-HHhcCCCceecC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHM-VRHGKPLTLCCE   90 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~-~~h~~~~~~~c~   90 (148)
                      .+++|||+|.++.|++.|.....|..|+ ++|++++|+.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3455555554334555555555555554 345555555554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=1e-10  Score=64.91  Aligned_cols=43  Identities=16%  Similarity=0.208  Sum_probs=37.9

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHH-HHhcCCCCceeCCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHL-KEHSNVSAPYMCDYKG  124 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~-~~h~~~~k~~~C~~c~  124 (148)
                      +++++||.|.+..|++.|.+...|..|+ ++|++ ++||-|..-+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~~~~   65 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSAEVE   65 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCCSCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccccccc
Confidence            6789999998446999999999999997 69999 9999997644

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.95  E-value=5.8e-10  Score=55.16  Aligned_cols=37  Identities=19%  Similarity=0.420  Sum_probs=22.3

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMC  120 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C  120 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++ ++||.+
T Consensus         1 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCS--FCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECT--TTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECC--CCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            3455666666  666666666666666666666 566543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1e-09  Score=53.50  Aligned_cols=35  Identities=23%  Similarity=0.491  Sum_probs=21.0

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      ++|+++++|.|.  .|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCP--VCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEET--TTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCC--CCCCccCCHHHHHHHHHHHcCCC
Confidence            355566666666  66666666666666666665554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-09  Score=53.52  Aligned_cols=34  Identities=21%  Similarity=0.381  Sum_probs=18.6

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +.+++||.|.++.|+++|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4455556665223666666555565665555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=6.4e-11  Score=69.74  Aligned_cols=59  Identities=15%  Similarity=0.302  Sum_probs=47.3

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +.++|.++++|.|.  .|++.|.....|..|++.|++++||.|.  .|.    ....|..|+++|.+
T Consensus        16 ~~~~H~~~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCK--HCDSKLQSTAELTSHLNIHNEEFQKRAK--RQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECS--SSCCEESSHHHHHHHHHHHHHHHHHHCC--CCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCC--CCCCEeCCHHHHHHHHHHhCCCCCcccc--hhh----hHHHHHhhhccccc
Confidence            46678889999999  9999999999999999999998999988  543    45556666777766

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=5e-10  Score=54.64  Aligned_cols=35  Identities=9%  Similarity=0.091  Sum_probs=23.8

Q ss_pred             HHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        107 HLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       107 h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |+++|++ ++||.|..|++  .|...+.|..|+++|.+
T Consensus         2 H~~~h~~-~k~~~C~~C~k--~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTG-IKPFQCPDCDR--SFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCC--CBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCC-CCCccCCCCCc--ccCcHHHHHHHHHHhcc
Confidence            4556676 67777777776  56777777777776655

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=7.8e-10  Score=63.07  Aligned_cols=62  Identities=24%  Similarity=0.369  Sum_probs=56.3

Q ss_pred             cCCCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         45 STGGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        45 ~~~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ..|++.+.+++++.|.  .|++.|. ...|..|+ .|.+++|+.|.  .|++.|.. ..|..|+++|++
T Consensus         6 ~~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~--~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCG--NCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             SCCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECS--SSCCEEET-TGGGTHHHHBTT
T ss_pred             HhhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEcc--cCCCcCcH-HHHHHHHHHccC
Confidence            3478889999999999  9999995 88999999 89999999999  99999885 899999999988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.89  E-value=1.4e-09  Score=53.73  Aligned_cols=38  Identities=18%  Similarity=0.306  Sum_probs=34.4

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |+++++|.|.  .|++.|.....|..|++.|++++||.+.
T Consensus         1 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCS--FCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECT--TTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECC--CCCcccCCHHHHHHHHHHcCCCccceec
Confidence            5678999999  9999999999999999999999998753

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.8e-09  Score=52.95  Aligned_cols=36  Identities=19%  Similarity=0.552  Sum_probs=19.3

Q ss_pred             cCCCceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         82 GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        82 ~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      +++++|.|.++.|++.|.....|..|+++|++ ++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            44555555522255555555555555555555 5554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.87  E-value=7.5e-09  Score=57.08  Aligned_cols=55  Identities=20%  Similarity=0.376  Sum_probs=45.7

Q ss_pred             eeCCCcccccccCChHHHHHHHH-HhcCCC------ceecCcCCcccccCChHHHHHHHHHh
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMV-RHGKPL------TLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~------~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      +.|.|..|++.|.+...|..|+. .|.+.+      +|.|.|..|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            56888899999999999999985 687665      78898888998888888888888753

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.9e-13  Score=76.57  Aligned_cols=62  Identities=18%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             HHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070         72 SNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus        72 ~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      ..|..|++.|.++++|.|.  .|++.|.....|..        +++|.|..||+  .|...+.|..|+++|++.
T Consensus         4 ~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~--------~~~~~C~~C~~--~f~~~~~l~~H~~~H~~~   65 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR--------RKTPMCEKCRK--DSCQEAALNKDEGNESGK   65 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECS--SSCCEEECCCCCCC--------SSSCCCHHHHH--TCSCCCSSCCCSSCCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCC--cccchhCCHHHhCc--------CCCCCCCCCCh--hhcCHHHHHHHHHhhcCC
Confidence            3467788899999999999  99999999888765        48999999998  699999999999998764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=8.8e-10  Score=53.72  Aligned_cols=34  Identities=15%  Similarity=0.357  Sum_probs=20.5

Q ss_pred             HhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCC
Q psy11070         80 RHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        80 ~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k  116 (148)
                      .|+++++|.|.  .|++.|.....|..|+++|++ ++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~h~~-~k   36 (37)
T 2elo_A            3 SGSSGRSYSCP--VCEKSFSEDRLIKSHIKTNHP-EV   36 (37)
T ss_dssp             CCCCCCCCEET--TTTEECSSHHHHHHHHHHHCS-SC
T ss_pred             CCCCCCCcCCC--CCCCccCCHHHHHHHHHHHcC-CC
Confidence            35556666666  666666666666666666665 44

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.84  E-value=4.1e-09  Score=50.49  Aligned_cols=33  Identities=21%  Similarity=0.357  Sum_probs=17.2

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      |.++++|.|.  .|++.|.....|..|++.|++++
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCA--LCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECS--SSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECC--CCcchhCCHHHHHHHHHHHcCCC
Confidence            3445555555  55555555555555555555443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.84  E-value=3.5e-09  Score=51.52  Aligned_cols=35  Identities=26%  Similarity=0.612  Sum_probs=20.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |+++|.++++|.|.  .|++.|.....|..|++.|++
T Consensus         2 H~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCC--CCCcccCcHHHHHHHHHHhcc
Confidence            44555556666666  666666666666666555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.81  E-value=4.1e-09  Score=50.57  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=16.0

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++
T Consensus         2 H~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECS--SSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCC--CCCcccCCHHHHHHHHHHcCC
Confidence            3444555555  555555555555555555554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=5.3e-10  Score=65.77  Aligned_cols=58  Identities=14%  Similarity=0.186  Sum_probs=47.2

Q ss_pred             HHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070         78 MVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus        78 ~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ++.|+++++|.|.  .|++.|.....|..|+++|++ ++||.|..|.+      ...|..|.+.|.+
T Consensus        17 ~~~H~~~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~~~~------~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCK--HCDSKLQSTAELTSHLNIHNE-EFQKRAKRQER------RKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECS--SSCCEESSHHHHHHHHHHHHH-HHHHHCCCCSC------CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCC--CCCCEeCCHHHHHHHHHHhCC-CCCcccchhhh------HHHHHhhhccccc
Confidence            3568999999999  999999999999999999999 99999987764      2334445555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=6.1e-09  Score=51.38  Aligned_cols=31  Identities=13%  Similarity=0.036  Sum_probs=17.5

Q ss_pred             hcCCCCceeCCC--CCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDY--KGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~--c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +++ ++||.|.+  |++  +|...+.|..|+++|++
T Consensus         4 ~~g-ekp~~C~~~~C~k--~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSS-GILLKCPTDGCDY--STPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSC-CCCEECSSSSCCC--EESCHHHHHHHHHHHSC
T ss_pred             CCC-CCCCCCCCCCCCC--ccCCHHHHHHHHHhcCC
Confidence            344 55666654  555  45566666666666554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.78  E-value=5.6e-09  Score=50.10  Aligned_cols=33  Identities=30%  Similarity=0.467  Sum_probs=16.7

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      |+++++|.|.  .|++.|.....|..|++.|++++
T Consensus         2 H~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECS--SSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCC--CCCcccCCHHHHHHHHHHcCCCC
Confidence            4445555555  55555555555555555554443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=5e-09  Score=51.27  Aligned_cols=37  Identities=24%  Similarity=0.531  Sum_probs=24.3

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCCCce
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTL   87 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~   87 (148)
                      |+++++|.|.++.|++.|.....|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4556677776334777777777777777777666654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.77  E-value=7.8e-09  Score=49.49  Aligned_cols=31  Identities=19%  Similarity=0.388  Sum_probs=16.3

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |+++++|.|.  .|++.|.....|..|+++|++
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCA--LCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECS--SSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECC--CCcchhCCHHHHHHHHHHHcC
Confidence            3445555555  555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3e-09  Score=51.92  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=23.3

Q ss_pred             HHhcCCCCceeCCCCCCCcccccHHHHHHH-HHhhCCC
Q psy11070        109 KEHSNVSAPYMCDYKGVCMSLTLKISFVKA-VANNSKY  145 (148)
Q Consensus       109 ~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h-~~~h~~~  145 (148)
                      ++|++ ++||.|..||+  .|...+.|..| +++|++.
T Consensus         2 ~~H~~-~k~~~C~~C~k--~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS-GHLYYCSQCHY--SSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS-SCEEECSSSSC--EEECHHHHHHHHHHHTCCC
T ss_pred             CccCC-CcCeECCCCCc--ccCCHHHHHHHHHHHccCc
Confidence            35666 67777777776  57777777777 6666653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.74  E-value=9.2e-09  Score=48.85  Aligned_cols=30  Identities=20%  Similarity=0.456  Sum_probs=17.6

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      ||.|.  .|++.|.....|..|+++|++ ++||
T Consensus         2 p~~C~--~C~k~F~~~~~L~~H~~~H~~-~~~~   31 (33)
T 1rim_A            2 KFACP--ECPKRFMRSDHLSKHITLHEL-LGEE   31 (33)
T ss_dssp             CCCCS--SSCCCCSSHHHHHHHHHHHTT-TCCC
T ss_pred             cccCC--CCCchhCCHHHHHHHHHHhCC-CCCC
Confidence            45555  566666666666666666655 5555

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=1.1e-08  Score=49.71  Aligned_cols=34  Identities=24%  Similarity=0.448  Sum_probs=20.2

Q ss_pred             ccCCCCCceeCCCcccccccCCh-HHHHHHHHHhcCC
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTL-SNLKMHMVRHGKP   84 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~-~~l~~h~~~h~~~   84 (148)
                      ++|+++++|.|.  .|++.|... ..|..|++.|+++
T Consensus         2 ~~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCP--YCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECS--SSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECC--CCChhhccCHHHHHHHHHhcCCC
Confidence            345556666666  666666665 6666666665544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.7e-08  Score=48.65  Aligned_cols=33  Identities=30%  Similarity=0.509  Sum_probs=20.2

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      .|.++++|.|.  .|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCS--LCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECS--SSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCC--CCCchhCCHHHHHHHHHHhccC
Confidence            45556666666  6666666666666666666544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=2.2e-08  Score=48.19  Aligned_cols=33  Identities=21%  Similarity=0.532  Sum_probs=19.2

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +|.++++|.|.  .|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCP--QCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECS--SSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCC--CCCcccCCHHHHHHHHHHccCC
Confidence            45555566666  6666666666666666555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.70  E-value=5.2e-09  Score=53.94  Aligned_cols=34  Identities=21%  Similarity=0.483  Sum_probs=16.0

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      .|.++++|.|.++.|++.|.....|..|++.|++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            3444455555322455555554455555444444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.70  E-value=1.6e-08  Score=47.99  Aligned_cols=32  Identities=28%  Similarity=0.475  Sum_probs=29.9

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCCcee
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLC   88 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~   88 (148)
                      +||.|.  .|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACP--ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCC--CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            579999  99999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.8e-08  Score=49.07  Aligned_cols=33  Identities=24%  Similarity=0.501  Sum_probs=19.0

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHH-HHHhcC
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMH-MVRHGK   83 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h-~~~h~~   83 (148)
                      ++|.+++||.|.  .|++.|.....|..| ++.|++
T Consensus         2 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCS--QCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECS--SSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECC--CCCcccCCHHHHHHHHHHHccC
Confidence            345555666666  666666666666666 555554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.6e-08  Score=48.74  Aligned_cols=33  Identities=24%  Similarity=0.576  Sum_probs=18.1

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      .|+++++|.|.  .|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCH--ICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECS--SSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECC--CCCCccCCHHHHHHHHHHhcCC
Confidence            34555555555  5555555555555555555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=3.5e-08  Score=47.46  Aligned_cols=33  Identities=24%  Similarity=0.460  Sum_probs=20.2

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +|.++++|.|.  .|++.|.....|..|++.|+++
T Consensus         3 ~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCD--MCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCT--TTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecC--cCCCCcCchHHHHHHHHHhcCC
Confidence            45556666666  6666666666666666666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.63  E-value=2.3e-08  Score=51.76  Aligned_cols=31  Identities=19%  Similarity=0.514  Sum_probs=21.5

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHH-HhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLK-EHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~  113 (148)
                      |+++++|.|.  .|++.|.....|..|++ +|++
T Consensus         2 Ht~~kp~~C~--~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACD--ICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECT--TTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECC--CcCcccCCHHHHHHHhhhhcCC
Confidence            5666677776  67777777777777776 6666

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=3.9e-08  Score=47.28  Aligned_cols=31  Identities=16%  Similarity=0.301  Sum_probs=15.9

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |++ ++||.|.+|++  .|.....|..|+++|.+
T Consensus         4 h~~-~k~~~C~~C~k--~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSS-GKPYKCPQCSY--ASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCC-CCSEECSSSSC--EESSHHHHHHHHHHHTC
T ss_pred             CCC-CCCCCCCCCCc--ccCCHHHHHHHHHHccC
Confidence            444 45555555554  35555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=5.8e-09  Score=53.77  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=16.2

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |++++||.|.+..|++.|.....|..|+++|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            445555555311355555555555555555544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=4.2e-08  Score=47.23  Aligned_cols=31  Identities=16%  Similarity=0.263  Sum_probs=16.0

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |++ ++||.|.+|++  .|...+.|..|+++|++
T Consensus         4 h~~-~k~~~C~~C~k--~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSS-GKPFKCSLCEY--ATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCC-CCSEECSSSSC--EESCHHHHHHHHHHSST
T ss_pred             CCC-CCCccCCCCCc--hhCCHHHHHHHHHHhcc
Confidence            444 55555555554  35555555555555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.9e-08  Score=48.83  Aligned_cols=30  Identities=10%  Similarity=0.181  Sum_probs=14.7

Q ss_pred             hcCCCCceeCCCCCCCcccccH-HHHHHHHHhhC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLK-ISFVKAVANNS  143 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~-~~l~~h~~~h~  143 (148)
                      |++ ++||.|..|++  .|.+. +.|..|+++|+
T Consensus         4 h~~-~k~~~C~~C~k--~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            4 GSS-GRAMKCPYCDF--YFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCC-CCCEECSSSSC--EECSSCHHHHHHHHHHH
T ss_pred             CCC-CCCeECCCCCh--hhccCHHHHHHHHHhcC
Confidence            444 45555555554  34444 45555555444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=5.3e-08  Score=46.87  Aligned_cols=32  Identities=25%  Similarity=0.553  Sum_probs=17.5

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      |.++++|.|.  .|++.|.....|..|++.|+++
T Consensus         4 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCE--YCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECT--TTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECC--CCCceeCCHHHHHHHHHHhCCC
Confidence            4445555555  5555555555555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.7e-08  Score=47.44  Aligned_cols=30  Identities=10%  Similarity=0.094  Sum_probs=15.4

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |++ ++||.|.+|++  .|...+.|..|+++|+
T Consensus         4 h~~-~k~~~C~~C~k--~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            4 GSS-GLLYDCHICER--KFKNELDRDRHMLVHG   33 (36)
T ss_dssp             SCC-CCCEECSSSCC--EESSHHHHHHHHTTTS
T ss_pred             CCC-CCCeECCCCCC--ccCCHHHHHHHHHHhc
Confidence            444 45555555554  3555555555555544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=5.8e-08  Score=46.63  Aligned_cols=31  Identities=16%  Similarity=0.183  Sum_probs=16.2

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |++ +++|.|.+|++  .|.....|..|+++|++
T Consensus         4 h~~-~~~~~C~~C~k--~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSS-GKTHLCDMCGK--KFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCC-CSSCBCTTTCC--BCSSHHHHHHHHHHHSS
T ss_pred             CCC-CCCeecCcCCC--CcCchHHHHHHHHHhcC
Confidence            444 45555555554  35555555555555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=5.3e-08  Score=47.31  Aligned_cols=33  Identities=27%  Similarity=0.525  Sum_probs=15.4

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |+++++|.|.++.|++.|.....|..|++.|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            344445555422255555555555555554444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.57  E-value=3.9e-08  Score=50.85  Aligned_cols=35  Identities=20%  Similarity=0.464  Sum_probs=29.8

Q ss_pred             cCCCCCceeCCCcccccccCChHHHHHHHH-HhcCCCc
Q psy11070         50 NSKKQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKPLT   86 (148)
Q Consensus        50 ~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~~   86 (148)
                      +|+++++|.|.  .|++.|.....|..|++ .|+++..
T Consensus         1 ~Ht~~kp~~C~--~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACD--ICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECT--TTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECC--CcCcccCCHHHHHHHhhhhcCCCCC
Confidence            47899999999  99999999999999999 8988654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=6.5e-08  Score=46.54  Aligned_cols=31  Identities=16%  Similarity=0.313  Sum_probs=16.2

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |.+ ++||.|..|++  .|...+.|..|+++|.+
T Consensus         4 ~~~-~k~~~C~~C~k--~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSS-GKIFTCEYCNK--VFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSC-CCCEECTTTCC--EESSHHHHHHHHHHHCC
T ss_pred             CCC-CCCEECCCCCc--eeCCHHHHHHHHHHhCC
Confidence            344 45555555554  35555555555555543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.55  E-value=5.4e-08  Score=45.19  Aligned_cols=28  Identities=21%  Similarity=0.568  Sum_probs=14.1

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.|..|++.|.....|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            4445333455555555555555555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=1.1e-07  Score=52.64  Aligned_cols=40  Identities=20%  Similarity=0.360  Sum_probs=31.6

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKG  124 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~  124 (148)
                      +.+++||.|.  .|++.|.+...|..|+++|++ +. ..+.+++
T Consensus         8 ~~~ekpy~C~--~CgK~F~~~s~L~~H~r~Htg-~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCG--LCGKVFTDANRLRQHEAQHGV-TS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCT--TTCCCCSCHHHHHHHHHHHTT-TS-CCCCSCC
T ss_pred             CCCccCcCCC--CCCCccCCHHHHHhhhhhhCC-Cc-ccccccc
Confidence            5678899999  899999999999999999988 43 4455544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.49  E-value=1.1e-07  Score=44.13  Aligned_cols=26  Identities=23%  Similarity=0.503  Sum_probs=13.5

Q ss_pred             ceeCC--CCCCCcccccHHHHHHHHHhhCC
Q psy11070        117 PYMCD--YKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       117 ~~~C~--~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ||.|.  .||+  .|...+.|..|+++|++
T Consensus         2 p~~C~~~~C~k--~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGK--RFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCC--BCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCc--ccCCHhHHHHHHHHhcC
Confidence            45554  5554  35555555555555543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.47  E-value=5.9e-07  Score=49.35  Aligned_cols=56  Identities=20%  Similarity=0.367  Sum_probs=46.4

Q ss_pred             eecCcCCcccccCChHHHHHHH-HHhcCCCC------ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHL-KEHSNVSA------PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~-~~h~~~~k------~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      +.|.|..|++.|.....|..|+ +.|.+ .+      +|.|..=++.+.+.....|..|++..+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~-~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVS-QDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCC-CCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccC-cccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            5688989999999999999998 58987 55      799985555457788889999998754

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=1.4e-07  Score=42.24  Aligned_cols=27  Identities=11%  Similarity=0.175  Sum_probs=19.1

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      ++||.|..||+  .|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k--~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQ--RSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSC--EESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcCh--hhCCHHHHHHHHHHcc
Confidence            36777777776  5777777777777663

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=1.4e-07  Score=43.97  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=15.3

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.+..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            34555432355555555555555555554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=1.3e-07  Score=42.62  Aligned_cols=27  Identities=22%  Similarity=0.391  Sum_probs=18.1

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +||.|..||+  .|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k--~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGK--RFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCC--EESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCc--ccCCHHHHHHHHHhcCC
Confidence            5677777776  56677777777766653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.43  E-value=1.2e-07  Score=46.05  Aligned_cols=26  Identities=27%  Similarity=0.462  Sum_probs=16.9

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHH
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHM   78 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~   78 (148)
                      +.+++||.|.  .|+++|.+...|..|+
T Consensus         3 ~~gekp~~C~--~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCL--PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEET--TTTEECSCHHHHHHHH
T ss_pred             CCCccCeECC--CCCCccCCHhHccCcC
Confidence            3456666666  6666666666666665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.41  E-value=1.5e-07  Score=45.66  Aligned_cols=25  Identities=28%  Similarity=0.535  Sum_probs=13.3

Q ss_pred             cCCCceecCcCCcccccCChHHHHHHH
Q psy11070         82 GKPLTLCCEELGCGRKFQTMKQYSTHL  108 (148)
Q Consensus        82 ~~~~~~~c~~~~C~~~f~~~~~l~~h~  108 (148)
                      .+++||.|.  .|++.|.+...|..|+
T Consensus         4 ~gekp~~C~--~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCL--PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEET--TTTEECSCHHHHHHHH
T ss_pred             CCccCeECC--CCCCccCCHhHccCcC
Confidence            345555555  5555555555555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=3.7e-07  Score=50.50  Aligned_cols=36  Identities=25%  Similarity=0.498  Sum_probs=31.5

Q ss_pred             CccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         48 GKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        48 ~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      ...+.+++||.|.  .|++.|.....|..|+++|+++.
T Consensus         5 ~~~~~~ekpy~C~--~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCG--LCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCT--TTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCCccCcCCC--CCCCccCCHHHHHhhhhhhCCCc
Confidence            3457788999999  99999999999999999999864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=1.1e-07  Score=42.64  Aligned_cols=25  Identities=20%  Similarity=0.280  Sum_probs=16.5

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      +||.|..||+  .|...+.|..|+++|
T Consensus         2 k~~~C~~C~k--~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRA--GCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTE--EESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCc--ccCCHHHHHHHHHhc
Confidence            5666777765  466666666666655

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=3.2e-07  Score=41.76  Aligned_cols=27  Identities=30%  Similarity=0.596  Sum_probs=13.6

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         2 k~~~C~--~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCD--YCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCC--CCCcccCCHHHHHHHHHHhcc
Confidence            344555  455555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=4e-07  Score=41.42  Aligned_cols=27  Identities=30%  Similarity=0.578  Sum_probs=15.2

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +||.|..||+  .|.....|..|+++|++
T Consensus         2 k~~~C~~C~~--~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGR--SFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCC--EESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCc--ccCCHHHHHHHHHHhcc
Confidence            4555666555  45555555566555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.35  E-value=1.1e-08  Score=48.20  Aligned_cols=30  Identities=20%  Similarity=0.465  Sum_probs=15.2

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcCCCCce
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPY  118 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~  118 (148)
                      ||.|.  .|++.|.....|..|+++|++ ++||
T Consensus         2 p~~C~--~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            2 AFACP--ACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CSSSS--SSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCC--CCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            44455  555555555555555555555 4443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=5e-07  Score=40.82  Aligned_cols=26  Identities=31%  Similarity=0.745  Sum_probs=12.5

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCE--VCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECC--CCCcccCCHHHHHHHHHHhcC
Confidence            34444  444444444444444444444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=4.6e-07  Score=41.00  Aligned_cols=21  Identities=24%  Similarity=0.551  Sum_probs=8.9

Q ss_pred             CcccccCChHHHHHHHHHhcC
Q psy11070         93 GCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      .|++.|.....|..|+++|++
T Consensus         7 ~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            7 ECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             SSSCEESCSHHHHHHHTGGGS
T ss_pred             CCCchhCCHHHHHHHHHHhcC
Confidence            444444444444444444433

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=3.4e-07  Score=41.47  Aligned_cols=29  Identities=31%  Similarity=0.730  Sum_probs=26.5

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      +||.|.  .|++.|.....|..|++.|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACP--ECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECS--SSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCC--CCCchhCCHHHHHHHHHHhcCCC
Confidence            579999  99999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.31  E-value=6.5e-07  Score=40.41  Aligned_cols=26  Identities=4%  Similarity=0.249  Sum_probs=13.1

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ||.|..||+  .|...+.|..|+++|++
T Consensus         2 ~~~C~~C~~--~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTR--AFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCC--BCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCc--ccCCHHHHHHHHHHhcC
Confidence            455555554  35555555555555443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.31  E-value=1.2e-08  Score=48.00  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=28.8

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCCce
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTL   87 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~   87 (148)
                      +||.|.  .|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACP--ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSS--SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC--CCCcccCCHHHHHHHHHHHccCCCC
Confidence            579999  9999999999999999999999886

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=5.4e-07  Score=40.67  Aligned_cols=26  Identities=38%  Similarity=0.781  Sum_probs=13.7

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCR--ECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECT--TTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCC--CCCCccCChhHHHHHHHHhcC
Confidence            44555  555555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=6.1e-07  Score=40.48  Aligned_cols=25  Identities=20%  Similarity=0.277  Sum_probs=12.3

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      ||.|..|++  .|.....|..|+++|.
T Consensus         2 ~~~C~~C~k--~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            2 PLKCRECGK--QFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CEECTTTSC--EESCHHHHHHHHHHHH
T ss_pred             CccCCCCCC--ccCChhHHHHHHHHhc
Confidence            445555554  3445555555555444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=8.3e-07  Score=39.54  Aligned_cols=25  Identities=28%  Similarity=0.610  Sum_probs=12.8

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHh
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      ++|.|.  .|++.|.....|..|++.|
T Consensus         2 k~~~C~--~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCS--LCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECS--SSSCEESSHHHHHHHHHHC
T ss_pred             cCccCC--CcChhhCCHHHHHHHHHHc
Confidence            345555  5555555555555555444

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=6e-07  Score=40.46  Aligned_cols=26  Identities=31%  Similarity=0.594  Sum_probs=13.2

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCP--HCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCS--SCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCC--CCCcccCCHHHHHHHHHHhcc
Confidence            44455  455555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.25  E-value=8.8e-07  Score=40.21  Aligned_cols=26  Identities=23%  Similarity=0.408  Sum_probs=13.4

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +|.|.  .|++.|.....|..|+++|.+
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQ--YCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCC--CCCCccCCHHHHHHHHHHHcc
Confidence            34455  555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=7.6e-07  Score=39.95  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=13.3

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      +||.|.  .|++.|.....|..|+++|+
T Consensus         2 k~~~C~--~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCS--VCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECS--SSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCC--CCCcccCCHHHHHHHHHhcC
Confidence            345555  55555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.24  E-value=9.4e-07  Score=40.11  Aligned_cols=27  Identities=30%  Similarity=0.498  Sum_probs=13.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +|.|.  .|++.|.....|..|++.|+++
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQ--YCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCC--CCCCccCCHHHHHHHHHHHccC
Confidence            34455  5555555555555555554443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=7e-07  Score=40.22  Aligned_cols=26  Identities=38%  Similarity=0.797  Sum_probs=12.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      ||.|.  .|++.|.....|..|++.|++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCP--HCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCS--SCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCC--CCCcccCCHHHHHHHHHHhcc
Confidence            34444  444444444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=9.9e-07  Score=40.95  Aligned_cols=29  Identities=14%  Similarity=0.323  Sum_probs=25.8

Q ss_pred             CCceeCC--CCCCCcccccHHHHHHHHHhhCCC
Q psy11070        115 SAPYMCD--YKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       115 ~k~~~C~--~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      ++||.|.  .||+  .|...+.|..|+++|++.
T Consensus         1 ek~~~C~~~~C~k--~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDK--AFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCC--CBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCC--ccCCHHHHHHHHHHccCC
Confidence            4799999  8998  699999999999999863

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.21  E-value=8.3e-07  Score=40.04  Aligned_cols=27  Identities=26%  Similarity=0.619  Sum_probs=13.1

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      +|.|.++.|++.|.....|..|++.|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            344444455555555555555544443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=41.49  Aligned_cols=25  Identities=16%  Similarity=0.491  Sum_probs=17.1

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      +||.|..||+  .|...+.|..|+++|
T Consensus         1 kp~~C~~C~k--~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGK--RFVQSSQLANHIRHH   25 (26)
Confidence            4677777776  566777777777665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=8.6e-07  Score=39.59  Aligned_cols=25  Identities=16%  Similarity=0.434  Sum_probs=13.0

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHh
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      +||.|.  .|++.|.....|..|+++|
T Consensus         2 k~~~C~--~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCP--LCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEET--TTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCC--CCCcccCCHHHHHHHHHhc
Confidence            345555  5555555555555555444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.6e-07  Score=41.98  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=13.2

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCV--MCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            34455  455555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.9e-07  Score=41.79  Aligned_cols=25  Identities=24%  Similarity=0.410  Sum_probs=12.8

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      ||.|..||+  .|...+.|..|+++|+
T Consensus         2 ~~~C~~C~k--~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            2 PCQCVMCGK--AFTQASSLIAHVRQHT   26 (29)
Confidence            455555554  3555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.9e-07  Score=41.99  Aligned_cols=26  Identities=23%  Similarity=0.552  Sum_probs=13.3

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         3 ~~~C~--~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCI--HCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            44555  455555555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.4e-07  Score=41.77  Aligned_cols=27  Identities=15%  Similarity=0.188  Sum_probs=15.0

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +||.|..||+  .|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k--~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQR--QFADPGALQRHVRIHTG   28 (30)
Confidence            4555665555  45555555555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.11  E-value=1.8e-06  Score=38.26  Aligned_cols=23  Identities=17%  Similarity=0.235  Sum_probs=9.3

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |.|..||+  .|...+.|..|+++|
T Consensus         2 ~~C~~C~k--~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            2 YKCGLCER--SFVEKSALSRHQRVH   24 (27)
T ss_dssp             CBCSSSCC--BCSSHHHHHHHGGGT
T ss_pred             ccCCCCCC--cCCCHHHHHHHHHHc
Confidence            34444443  244444444444433

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.10  E-value=1.5e-06  Score=38.54  Aligned_cols=25  Identities=32%  Similarity=0.534  Sum_probs=13.0

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |.|.  .|++.|.....|..|+++|++
T Consensus         2 ~~C~--~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCG--LCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCS--SSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCC--CCCCcCCCHHHHHHHHHHcCC
Confidence            4455  555555555555555555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=1.8e-06  Score=39.22  Aligned_cols=15  Identities=27%  Similarity=0.441  Sum_probs=5.9

Q ss_pred             CcccccCChHHHHHH
Q psy11070         93 GCGRKFQTMKQYSTH  107 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h  107 (148)
                      .|++.|.....|..|
T Consensus         7 ~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            7 LCNRAFTRRDLLIRH   21 (30)
T ss_dssp             TTCCBCSSSHHHHHH
T ss_pred             ccCcccCChHHHHHH
Confidence            333333333333333

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.06  E-value=2.2e-06  Score=38.55  Aligned_cols=27  Identities=15%  Similarity=0.233  Sum_probs=18.9

Q ss_pred             CceeCC--CCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCD--YKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~--~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ++|.|.  .||+  .|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k--~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGR--SFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCE--EESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcC--ccCCHHHHHHHHHHhCC
Confidence            467777  7776  57777777777777653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=1.9e-06  Score=39.18  Aligned_cols=29  Identities=31%  Similarity=0.505  Sum_probs=25.5

Q ss_pred             CceeCCCcccccccCChHHHHHH-HHHhcCCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMH-MVRHGKPL   85 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h-~~~h~~~~   85 (148)
                      ++|.|.  .|++.|.....|..| ++.|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACG--LCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCT--TTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCc--ccCcccCChHHHHHHHHHHccCCC
Confidence            478999  999999999999999 67888763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=9.3e-07  Score=38.99  Aligned_cols=24  Identities=38%  Similarity=0.753  Sum_probs=12.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHh
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      ||.|.  .|++.|.....|..|++.|
T Consensus         2 p~~C~--~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCE--RCGKRFVQSSQLANHIRHH   25 (26)
Confidence            44455  5555555555555554443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.78  E-value=0.00023  Score=43.91  Aligned_cols=27  Identities=4%  Similarity=-0.125  Sum_probs=13.3

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHH
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      |+| ++||.|..|++  .|.+.+.|..|++
T Consensus        45 ~tG-ekpfyC~~C~K--~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPG-GGLHRCLACAR--YFIDSTNLKTHFR   71 (124)
T ss_dssp             SGG-GGCSEETTTTE--ECSSHHHHHHHTT
T ss_pred             CCC-CcceEcccCcc--hhCCHHHHHHHHh
Confidence            444 45555555554  3555555555543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.36  E-value=0.00087  Score=41.31  Aligned_cols=27  Identities=30%  Similarity=0.495  Sum_probs=14.0

Q ss_pred             CCCCCceeCCCcccccccCChHHHHHHHH
Q psy11070         51 SKKQQLWSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        51 h~~~k~~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      |+|+++|.|.  .|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~--~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCL--ACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEET--TTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcc--cCcchhCCHHHHHHHHh
Confidence            4455555555  55555555555554444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.17  E-value=0.038  Score=34.15  Aligned_cols=77  Identities=10%  Similarity=0.114  Sum_probs=48.5

Q ss_pred             CceeCCCcccccccCChHHHHHHH--HHhcCC-CceecC----cCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHM--VRHGKP-LTLCCE----ELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCM  127 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~--~~h~~~-~~~~c~----~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~  127 (148)
                      +++.|.  .|+..|.+...+..|.  +.|... +.+.+.    ...-+..+....    +...+.+ .+.|.|..|+.  
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~C~~C~~--  101 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGE-DRSKCCPVCNM--  101 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCC-CTTTEETTTTE--
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCC-CCCeEcCCCCC--
Confidence            458899  9999999999999998  445321 122211    000112222111    1223455 67899999997  


Q ss_pred             ccccHHHHHHHHH
Q psy11070        128 SLTLKISFVKAVA  140 (148)
Q Consensus       128 ~f~~~~~l~~h~~  140 (148)
                      .|.....|..|..
T Consensus       102 ~f~s~~~~~~H~~  114 (127)
T 1zu1_A          102 TFSSPVVAESHYI  114 (127)
T ss_dssp             ECSSHHHHHHHHT
T ss_pred             EeCCHHHHHHHHC
Confidence            7999999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.12  E-value=0.018  Score=28.96  Aligned_cols=24  Identities=33%  Similarity=0.617  Sum_probs=20.9

Q ss_pred             CceeCCCcccccccCChHHHHHHHHH
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      .+|.|+  .|+..|.....|+.||+.
T Consensus        11 ~~~~CP--rCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICP--RCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCT--TTCCCCSSHHHHHHHHHH
T ss_pred             CceeCC--cccccccchHHHHhhhhh
Confidence            568899  999999999999999883

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.12  E-value=0.032  Score=28.01  Aligned_cols=23  Identities=17%  Similarity=0.416  Sum_probs=15.0

Q ss_pred             CceecCcCCcccccCChHHHHHHHH
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      .++.|+  .|+..|.....|+.|++
T Consensus        11 ~~~~CP--rCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICP--RCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCT--TTCCCCSSHHHHHHHHH
T ss_pred             CceeCC--cccccccchHHHHhhhh
Confidence            346666  66666666666666665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.91  E-value=0.044  Score=33.83  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=22.8

Q ss_pred             CceecCcCCcccccCChHHHHHHH--HHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHL--KEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~--~~h~~  113 (148)
                      +++.|.  .|...|.+...+..|.  +.|..
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~   59 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHAN   59 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHH
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHH
Confidence            568899  9999999999999998  55654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.87  E-value=0.07  Score=34.43  Aligned_cols=82  Identities=18%  Similarity=0.256  Sum_probs=56.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHH
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKIS  134 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~  134 (148)
                      ....|+..+|+..+. ...|..|.. .=.-.+..|+  .|+..+ ....|..|....-. .+.-.|..|+.   .-....
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~--~C~~~~-~r~~l~~H~~~~C~-~r~~~C~~C~~---~~~~~~  151 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCP--QCQRPF-QKFHINIHILKDCP-RRQVSCDNCAA---SMAFED  151 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECT--TTCCEE-EGGGHHHHHHHTCT-TCEEECTTTCC---EEEGGG
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECC--CCChHH-HHHHHHHHhhhhCC-CCCeECCCCCC---ccCHHH
Confidence            346675447887665 345667753 2234567898  899887 56678899877777 78889999996   335567


Q ss_pred             HHHHHHhhCCC
Q psy11070        135 FVKAVANNSKY  145 (148)
Q Consensus       135 l~~h~~~h~~~  145 (148)
                      |..|..++.|.
T Consensus       152 l~~H~~~~~~~  162 (170)
T 3hcs_A          152 KEIHDQNCPLA  162 (170)
T ss_dssp             HHHHHTTCCC-
T ss_pred             HHhHHHhCcCh
Confidence            78998877653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.31  E-value=0.42  Score=30.71  Aligned_cols=75  Identities=13%  Similarity=0.345  Sum_probs=50.8

Q ss_pred             CCCCcceeeccCCCccCC---CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHh
Q psy11070         35 LGINKEYFISSTGGKNSK---KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        35 ~~~~~~~~~~~~~~~~h~---~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .+|........  +..|.   .-++..|+  .|+..+. ...|..|....=..+.-.|.  .|+..+.. ..|..|..++
T Consensus        88 ~GC~~~~~~~~--l~~H~~~C~~~~v~C~--~C~~~~~-r~~l~~H~~~~C~~r~~~C~--~C~~~~~~-~~l~~H~~~~  159 (170)
T 3hcs_A           88 EGCLHKMELRH--LEDHQAHCEFALMDCP--QCQRPFQ-KFHINIHILKDCPRRQVSCD--NCAASMAF-EDKEIHDQNC  159 (170)
T ss_dssp             TTCCCEEEGGG--HHHHHTTCTTSEEECT--TTCCEEE-GGGHHHHHHHTCTTCEEECT--TTCCEEEG-GGHHHHHTTC
T ss_pred             CCCCceecHhH--HHHHHhcCCceeeECC--CCChHHH-HHHHHHHhhhhCCCCCeECC--CCCCccCH-HHHHhHHHhC
Confidence            46666544332  22232   23567899  9999884 56689998777777888999  99987755 5678999999


Q ss_pred             cCCCCce
Q psy11070        112 SNVSAPY  118 (148)
Q Consensus       112 ~~~~k~~  118 (148)
                      +| ..++
T Consensus       160 ~~-~~~~  165 (170)
T 3hcs_A          160 PL-ALEH  165 (170)
T ss_dssp             CC-----
T ss_pred             cC-hhhh
Confidence            88 5543

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=88.99  E-value=0.23  Score=32.42  Aligned_cols=40  Identities=13%  Similarity=0.159  Sum_probs=30.8

Q ss_pred             hHHHHHHHHHhcCC--C----CceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        101 MKQYSTHLKEHSNV--S----APYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       101 ~~~l~~h~~~h~~~--~----k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      -..|..|++...-+  +    +-|+|..||+   +....+|..|++.|.
T Consensus       132 GgrlieHlK~~~~~GqDyvFWQFYKCe~CgK---YvDId~~~~Hlk~Hg  177 (226)
T 2czr_A          132 GAALVNHIKNNALAGQDYIFWQFYKCEECGK---YVDIENLEAHLREHG  177 (226)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCC---EEEGGGHHHHHHTTT
T ss_pred             hHHHHHHHHhccccCcceEEEEEEehhhcCc---eecHHHHHHHHHHcC
Confidence            36788998854321  1    3479999997   888999999999886

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.11  E-value=1.2  Score=20.65  Aligned_cols=25  Identities=28%  Similarity=0.545  Sum_probs=20.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH-hc
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR-HG   82 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~-h~   82 (148)
                      .|.|+  .|-+.|.....|..|... |.
T Consensus         5 GFiCP--~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICP--QCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECT--TTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCc--HHHHHcCCHHHHHHHHHhccc
Confidence            38888  999999988888888664 54

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 6e-05
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 64  CNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH 111
           C K FT  S    HM  H       C    CG+KF+       H+K H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 59 CPIKNCNKRFTTLSNLKMHMVRH 81
          CP   CNK+F   +NLK H++ H
Sbjct: 5  CPFDGCNKKFAQSTNLKSHILTH 27

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 59 CPIKNCNKRFTTLSNLKMHMVRHGK 83
          C    C+K F    +L  H   H +
Sbjct: 6  CDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (71), Expect = 0.004
 Identities = 9/23 (39%), Positives = 10/23 (43%)

Query: 59 CPIKNCNKRFTTLSNLKMHMVRH 81
          C    C KRFT    L+ H   H
Sbjct: 5  CTWSYCGKRFTRSDELQRHKRTH 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.34
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.34
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.33
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.32
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.29
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.28
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.23
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.2
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.19
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.19
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.18
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.17
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.14
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.14
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.11
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.1
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.0
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.98
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.93
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.89
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.47
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.47
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.37
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.32
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.24
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.11
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.01
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.88
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.82
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.8
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.71
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.7
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.67
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.66
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.64
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.62
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.61
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.57
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.3
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.26
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.23
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.19
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.12
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.11
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.05
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.99
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.8
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.71
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.62
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.31
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.17
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.06
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.02
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.87
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.69
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.62
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.61
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.58
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.51
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.28
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.25
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.17
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.53
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.49
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.14
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.65
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.47
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.39
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.11
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.05
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.78
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.48
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.9
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	90.57
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.83
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.09
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.77
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	86.42
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.72
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.69
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.35
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.92

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.3e-17  Score=88.21  Aligned_cols=53  Identities=25%  Similarity=0.475  Sum_probs=42.5

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhh
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      ++||.|.   ||+.|.....|..|+++|+| ++||.|.+||+  .|.+.+.|..|+++|
T Consensus         1 EK~y~C~---Cgk~F~~~~~l~~H~~~Ht~-ekpy~C~~C~k--~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGK--KFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHSC-CCSEECTTTSC--EESSSHHHHHHHTTT
T ss_pred             CcCCCCC---CCCeECCHHHhHHHhhcccc-ccCCcCCCcCC--EecCHHHHHHHHhcC
Confidence            5778883   88888888888888888888 88888888887  588888888888765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=7.3e-17  Score=85.20  Aligned_cols=53  Identities=34%  Similarity=0.629  Sum_probs=50.8

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccccCChHHHHHHHHHh
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      +|||.|  + ||+.|.....|..|+++|+|++||.|.  .|++.|.....|..|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~--~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCC--CcCCEecCHHHHHHHHhcC
Confidence            589999  3 999999999999999999999999999  9999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.4e-13  Score=65.98  Aligned_cols=35  Identities=26%  Similarity=0.659  Sum_probs=23.4

Q ss_pred             CCceecCcCCcccccCChHHHHHHHH-HhcCCCCceeCC
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLK-EHSNVSAPYMCD  121 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~  121 (148)
                      ++||.|.  .||+.|.+..+|..|++ +|+| +|||.|.
T Consensus         3 ~Kpy~C~--~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQ--SCGKGFSRPDHLNGHIKQVHTS-ERPHKCQ   38 (39)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTSCC-CCCCCSS
T ss_pred             CCCccCC--CCCCCcCChHHhhccCcCccCC-CcCcCCc
Confidence            4666666  67777777777777754 5666 6777665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4.8e-14  Score=68.57  Aligned_cols=35  Identities=17%  Similarity=0.220  Sum_probs=23.0

Q ss_pred             HHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        107 HLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       107 h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |+++|++ +|||.|.+||+  +|.+.+.|..|+++|+|
T Consensus         3 H~~~Ht~-ekpy~C~~CgK--~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRE-RRRYKCDECGK--SFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCC-SCSSBCSSSCC--BCSCHHHHHHHHTTTCC
T ss_pred             cCcccCC-CCCEecCCCCc--eeeCHHHHHHhCccCCC
Confidence            5556666 66666666666  46666666666666665

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.2e-13  Score=62.69  Aligned_cols=32  Identities=22%  Similarity=0.292  Sum_probs=21.1

Q ss_pred             HhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        110 EHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       110 ~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +|+| +|||.|.+||+  +|.+.+.|..|+++|+|
T Consensus         1 IHTg-ekpy~C~~Cgk--~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSG-EKPYGCVECGK--AFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTT-CCCEECSSSCC--EESSHHHHHHHHHGGGC
T ss_pred             CcCC-CCCeeCCCCCC--EeCchHHhHhhccccCC
Confidence            3666 66666666666  56666666666666665

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=1.6e-13  Score=66.19  Aligned_cols=35  Identities=9%  Similarity=0.091  Sum_probs=27.1

Q ss_pred             HHHHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        107 HLKEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       107 h~~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |.|+|+| +|||.|.+||+  +|.+.+.|..|+++|.+
T Consensus         2 h~R~HTg-eKPy~C~~C~k--~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDR--SFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCC--CBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC-ccCeEeCCCCC--EecCHHHHHHHHhcCcC
Confidence            4577888 88888888887  58888888888887754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.4e-13  Score=64.21  Aligned_cols=34  Identities=15%  Similarity=0.237  Sum_probs=25.1

Q ss_pred             HHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070        109 KEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       109 ~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      |+|+| +|||+|.+||+  +|.+.+.|..|+++|++.
T Consensus         1 R~HTg-ekPy~C~~C~k--~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTG-EKPYACSHCDK--TFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCC-CCCEECSSSSC--EESSHHHHHHHHHHTTCS
T ss_pred             CCCCC-CCCEECCCCCC--CcCCHhHHHHhCcccCCC
Confidence            46777 77777777776  577777777777777654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5.4e-13  Score=63.64  Aligned_cols=34  Identities=35%  Similarity=0.868  Sum_probs=21.1

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhcCCCCceeCC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCD  121 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~  121 (148)
                      |.|+++.|++.|.++..|++|+++|+| +|||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            455555566666666666666666666 6666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.1e-13  Score=64.55  Aligned_cols=36  Identities=22%  Similarity=0.474  Sum_probs=20.8

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      |+++|+++|||.|.  .||++|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~--~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecC--CCCceeeCHHHHHHhCccCCCC
Confidence            45555555555555  5555555555555555555553

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.4e-12  Score=60.86  Aligned_cols=31  Identities=23%  Similarity=0.494  Sum_probs=18.7

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |+|++||.|.  .|++.|.+.+.|..|+++|+|
T Consensus         2 HTgekpy~C~--~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCV--ECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECS--SSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCC--CCCCEeCchHHhHhhccccCC
Confidence            5556666666  566666666666666666655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.3e-12  Score=63.39  Aligned_cols=36  Identities=22%  Similarity=0.462  Sum_probs=33.8

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHH-HhcCCCceecC
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMV-RHGKPLTLCCE   90 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~   90 (148)
                      .+|||+|.  .||++|.....|..|++ +|+|++||.|.
T Consensus         2 ~~Kpy~C~--~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCC--CCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            57999999  99999999999999986 69999999996

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=62.52  Aligned_cols=34  Identities=38%  Similarity=0.697  Sum_probs=32.7

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhcCCCceecC
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCE   90 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   90 (148)
                      |.|+++.|+++|.+...|+.|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            7899889999999999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.9e-12  Score=61.81  Aligned_cols=34  Identities=18%  Similarity=0.260  Sum_probs=26.2

Q ss_pred             HHhcCCCCceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070        109 KEHSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       109 ~~h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      |+|+| +|||.|.+||+  .|.+.+.|+.|++.+++.
T Consensus         1 R~HTg-ekP~~C~~C~k--~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSG-EKPYECYICHA--RFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSC-CCSEECTTTCC--EESCHHHHHHHHHHHSSS
T ss_pred             CccCC-CCCEeCCCCcc--cccchHHHHHHcccccCC
Confidence            46888 88888888887  688888888887655543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=2.8e-12  Score=60.60  Aligned_cols=31  Identities=16%  Similarity=0.321  Sum_probs=18.7

Q ss_pred             hcCCCCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        111 HSNVSAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       111 h~~~~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |+| +|||.|.+|++  .|++.+.|..|+++|+.
T Consensus         2 ~TG-ekPy~C~~C~k--~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSG-KRPFVCRICLS--AFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSC-CSCEECSSSCC--EESSHHHHHHHHGGGTS
T ss_pred             CCC-CccccCCCCCC--cccChHHHHHHccccCC
Confidence            455 66666666665  46666666666666553

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=5.3e-12  Score=60.32  Aligned_cols=33  Identities=24%  Similarity=0.567  Sum_probs=18.4

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |+|+|+|||.|.  .|+++|.....|..|++.|++
T Consensus         1 R~HTgekPy~C~--~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECC--CCCCCcCCHhHHHHhCcccCC
Confidence            345555555555  555555555555555555544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=3.6e-12  Score=57.13  Aligned_cols=28  Identities=7%  Similarity=0.215  Sum_probs=20.0

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ||||+|.+||+  .|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k--~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMR--NFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCC--EESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcC--EecccccccccCCCccC
Confidence            46777777776  57777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.8e-12  Score=58.55  Aligned_cols=29  Identities=31%  Similarity=0.533  Sum_probs=14.3

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      ||.|+++.|+++|....+|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44454444555555555555555555444

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=6.8e-12  Score=60.34  Aligned_cols=34  Identities=26%  Similarity=0.650  Sum_probs=20.6

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |.|+|+++|||.|.  .|+++|.+...|..|++.|.
T Consensus         2 h~R~HTgeKPy~C~--~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeC--CCCCEecCHHHHHHHHhcCc
Confidence            45566666666666  66666666666666665554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=7.7e-12  Score=56.94  Aligned_cols=30  Identities=30%  Similarity=0.649  Sum_probs=16.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      |||.|.++.|+++|.+.+.|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            355555445555555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.7e-12  Score=57.23  Aligned_cols=29  Identities=31%  Similarity=0.624  Sum_probs=15.4

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |||.|+++.|+++|.....|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            34555544555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=7.5e-13  Score=67.06  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=16.0

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |++++||.|.++.|++.|.+.++|..|+++|+|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            444555555422355555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1e-11  Score=57.12  Aligned_cols=31  Identities=19%  Similarity=0.488  Sum_probs=25.7

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcCCCC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k  116 (148)
                      +||.|+++.|++.|.+..+|..|+++|+| +|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg-eK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG-EK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC-CC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc-cC
Confidence            57888777888888888888888888888 64

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=1.6e-11  Score=58.00  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=19.5

Q ss_pred             hcCCCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         81 HGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        81 h~~~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      |+|++||.|.  .|++.|.++.+|..|+++|++
T Consensus         2 ~TGekPy~C~--~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECS--SSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCC--CCCCcccChHHHHHHccccCC
Confidence            4566666666  666666666666666666654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=6.2e-12  Score=63.59  Aligned_cols=38  Identities=18%  Similarity=0.343  Sum_probs=34.4

Q ss_pred             CCccCCCCCceeCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         47 GGKNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        47 ~~~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      ++ .|.+++||.|.++.|+++|...+.|..|+++|+|++
T Consensus        10 h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          10 YV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44 489999999996679999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.7e-11  Score=55.88  Aligned_cols=29  Identities=28%  Similarity=0.583  Sum_probs=21.6

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.++.|++.|.+...|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            46777766677777777777777777776

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.9e-11  Score=55.61  Aligned_cols=29  Identities=24%  Similarity=0.588  Sum_probs=19.2

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.|+.|++.|.++..|+.|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            46666655566666666666666666666

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.11  E-value=2.4e-11  Score=54.99  Aligned_cols=26  Identities=31%  Similarity=0.745  Sum_probs=13.5

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ||.|.  .|++.|.+...|.+|+++|+|
T Consensus         2 p~~C~--~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           2 SFVCE--VCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCCT--TTCCCBSCHHHHHHHHHTTTS
T ss_pred             cCCCC--CCCCCCCCchHcccccCcccC
Confidence            45555  555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.8e-11  Score=54.14  Aligned_cols=27  Identities=26%  Similarity=0.607  Sum_probs=14.3

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.  .|++.|.+++.|..|+++|+|
T Consensus         2 KPy~C~--~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCR--ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCC--CCcCEecccccccccCCCccC
Confidence            455555  555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.10  E-value=3.1e-11  Score=54.62  Aligned_cols=27  Identities=26%  Similarity=0.555  Sum_probs=14.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      ||.|+  .|+++|.+...|..|+++|+|+
T Consensus         2 p~~C~--~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCE--VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCT--TTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCC--CCCCCCCCchHcccccCcccCC
Confidence            45555  5555555555555555555544

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8.3e-11  Score=55.98  Aligned_cols=30  Identities=27%  Similarity=0.669  Sum_probs=18.7

Q ss_pred             ccCCCCCceeCCCcccccccCChHHHHHHHHH
Q psy11070         49 KNSKKQQLWSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        49 ~~h~~~k~~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      ++|+|+|||.|.  .|++.|....+|..|++.
T Consensus         1 R~HTgekP~~C~--~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           1 RTHSGEKPYECY--ICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCCSCCCSEECT--TTCCEESCHHHHHHHHHH
T ss_pred             CccCCCCCEeCC--CCcccccchHHHHHHccc
Confidence            356666666666  666666666666666543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.5e-11  Score=52.22  Aligned_cols=26  Identities=15%  Similarity=0.332  Sum_probs=19.1

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |||+|.+|||  .|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK--~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGK--AFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCC--EESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcC--eeccCcccccCccCCC
Confidence            5777777777  5777777777777763

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=4.4e-11  Score=53.89  Aligned_cols=29  Identities=28%  Similarity=0.800  Sum_probs=15.8

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |||+|.++.|+++|.+.+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            35555555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.3e-11  Score=53.49  Aligned_cols=27  Identities=30%  Similarity=0.695  Sum_probs=14.8

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.  .|++.|.+++.|..|+++|+|
T Consensus         1 Kpy~C~--~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACP--ECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCT--TTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECC--cCCCeecchHHhhhhcCccCC
Confidence            345555  555555555555555555555

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.7e-11  Score=53.40  Aligned_cols=27  Identities=33%  Similarity=0.758  Sum_probs=13.5

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      ||.|.  .|+++|.+.+.|..|+++|+|+
T Consensus         2 py~C~--~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACP--ECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCT--TTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECC--cCCCeecchHHhhhhcCccCCc
Confidence            44455  5555555555555555555444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=9e-11  Score=52.85  Aligned_cols=29  Identities=21%  Similarity=0.555  Sum_probs=16.7

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.++.|++.|.+...|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            35556555566666666666666655554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6e-11  Score=52.86  Aligned_cols=28  Identities=39%  Similarity=0.924  Sum_probs=16.4

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |||.|+++.|+++|.+.++|+.|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3556665556666666666666665553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=1.5e-10  Score=53.38  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=14.3

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |||.|.+++|+++|.+.+.|..|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4455554445555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.6e-10  Score=51.46  Aligned_cols=28  Identities=25%  Similarity=0.559  Sum_probs=17.7

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      +||.|+|+.|++.|.+..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4566665566666666666666666664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=5.9e-10  Score=51.29  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=15.6

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|.++.|++.|.+..+|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45555544455555555555555555543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=5.4e-10  Score=48.69  Aligned_cols=26  Identities=23%  Similarity=0.491  Sum_probs=15.0

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      +||.|.  .||+.|.+.+.|..|+++|+
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCCC
Confidence            355555  56666666666666655553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=3.2e-08  Score=42.38  Aligned_cols=27  Identities=15%  Similarity=0.236  Sum_probs=19.6

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      |+||.|.+||+  .|......++|.++|-
T Consensus         1 EkPf~C~~Cgr--kFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGR--KFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCC--EESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhh--hhhcchhhhhhhhhcc
Confidence            46777777776  5777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.2e-08  Score=40.68  Aligned_cols=16  Identities=31%  Similarity=0.827  Sum_probs=5.8

Q ss_pred             cccccCChHHHHHHHH
Q psy11070         94 CGRKFQTMKQYSTHLK  109 (148)
Q Consensus        94 C~~~f~~~~~l~~h~~  109 (148)
                      |++.|+++..|+.|+|
T Consensus         7 c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           7 CGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             TTBCCCCHHHHHHHGG
T ss_pred             hhhHhcchhHHHHHhh
Confidence            3333333333333333

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3.6e-08  Score=40.90  Aligned_cols=26  Identities=35%  Similarity=0.548  Sum_probs=23.9

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhcC
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHGK   83 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~~   83 (148)
                      |.+|.  .|++.|.++..|+.||+.|+|
T Consensus         1 phkc~--~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCE--VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBT--TTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccc--hhhhHhcchhHHHHHhhccCC
Confidence            46899  999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.1e-07  Score=41.21  Aligned_cols=29  Identities=28%  Similarity=0.383  Sum_probs=22.7

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      |||.|.+.|+..++...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57888887777788888888888887654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.6e-07  Score=40.80  Aligned_cols=29  Identities=28%  Similarity=0.663  Sum_probs=21.8

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +|||.|+  .|+.+|+.+..+..|.+.|.|.
T Consensus         1 ekp~~cp--ic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccc--hHHHHhhccccceEeeecccCc
Confidence            4677777  8888888877777777777653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3e-07  Score=39.84  Aligned_cols=28  Identities=29%  Similarity=0.616  Sum_probs=20.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |||.|..+.|+++|...++|..|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5677777777777777777777777644

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.24  E-value=6.1e-07  Score=38.16  Aligned_cols=26  Identities=42%  Similarity=0.786  Sum_probs=15.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHh
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      ||+|+++.|+++|...+.|++|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            55666666666666666666655544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=9.2e-07  Score=37.75  Aligned_cols=27  Identities=33%  Similarity=0.621  Sum_probs=19.6

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      ++||.|.  .||+.|.++...++|.++|.
T Consensus         1 EkPf~C~--~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACD--ICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccc--hhhhhhhcchhhhhhhhhcc
Confidence            4677777  77777777777777777764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=4.8e-07  Score=40.15  Aligned_cols=29  Identities=24%  Similarity=0.454  Sum_probs=15.0

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhcCCCce
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHGKPLTL   87 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~   87 (148)
                      ..|.  .||+.|.....|.+|...|++++||
T Consensus         6 ~~ce--~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACE--ICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEET--TTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHH--HHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3444  5555555555555555555555544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1e-06  Score=37.34  Aligned_cols=28  Identities=7%  Similarity=0.176  Sum_probs=18.1

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      ++||+|..|..  .-+..+.|..|++.|+|
T Consensus         1 erpfkcqlcsy--~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPY--ASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSC--EESSHHHHHHHHTTCCS
T ss_pred             CCcceeeeccc--ccCCchheEEeeecccC
Confidence            36677777664  45666677777776665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.11  E-value=1.1e-06  Score=37.51  Aligned_cols=30  Identities=30%  Similarity=0.617  Sum_probs=21.5

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +||.|..+.|.+.|.+...|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            467777777777777777777777777664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=2.4e-06  Score=35.88  Aligned_cols=26  Identities=23%  Similarity=0.269  Sum_probs=22.8

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      +||+|..|..  .....++|.+|+++|.
T Consensus         2 kp~kck~cdy--aaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDY--AAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCC--EESSHHHHHHHHHHSC
T ss_pred             CCcccccccc--hhcchhhHhhhhhccc
Confidence            7999999996  5788899999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.4e-06  Score=36.96  Aligned_cols=27  Identities=22%  Similarity=0.369  Sum_probs=13.6

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +||.|++|+-  .|+++..+.-|.+.|.|
T Consensus         2 kp~~cpic~q--rfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGL--RFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTE--ECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHH--HhhccccceEeeecccC
Confidence            4555555553  45555555555555443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.9e-06  Score=38.19  Aligned_cols=32  Identities=31%  Similarity=0.665  Sum_probs=28.4

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcCCCCcee
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYM  119 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k~~~  119 (148)
                      +...|.  .||+.|...-.|.+|.-.|++ ++||.
T Consensus         4 k~~~ce--~cgk~frdvyhlnrhklshs~-ekpys   35 (35)
T d2epra1           4 KQVACE--ICGKIFRDVYHLNRHKLSHSG-EKPYS   35 (35)
T ss_dssp             CSEEET--TTTEEESSHHHHHHHGGGSCS-CCCCC
T ss_pred             hhhhHH--HHHHHHHHHHHHHhhhcccCC-CCCCC
Confidence            456788  999999999999999999999 99984

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.01  E-value=2.8e-06  Score=36.06  Aligned_cols=27  Identities=30%  Similarity=0.603  Sum_probs=20.2

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHh
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h  111 (148)
                      .||.|+.+.|++.|..++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            367777777777777777777777766

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.2e-06  Score=36.08  Aligned_cols=21  Identities=24%  Similarity=0.531  Sum_probs=11.0

Q ss_pred             CcccccCChHHHHHHHHHhcC
Q psy11070         93 GCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      .||+.|..++.|++|+-+|+|
T Consensus         7 ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           7 ECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TTCCEESSHHHHHHHGGGTSC
T ss_pred             HHhHHHHHHHHHHHHhhcccC
Confidence            555555555555555555554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5.3e-06  Score=35.07  Aligned_cols=28  Identities=21%  Similarity=0.428  Sum_probs=18.8

Q ss_pred             CCceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         84 PLTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        84 ~~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      ++||+|.  .|...-..++.|..|+|.|+|
T Consensus         1 erpfkcq--lcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQ--ICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceee--ecccccCCchheEEeeecccC
Confidence            3566776  676666666777777776665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5e-06  Score=34.98  Aligned_cols=25  Identities=8%  Similarity=0.104  Sum_probs=13.3

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +.|.+||+  +|...+.|++|+-.|++
T Consensus         3 hvc~ecgk--af~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGK--AFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCC--EESSHHHHHHHGGGTSC
T ss_pred             chHHHHhH--HHHHHHHHHHHhhcccC
Confidence            45555555  35555555555555544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=4.3e-06  Score=37.73  Aligned_cols=28  Identities=29%  Similarity=0.559  Sum_probs=14.9

Q ss_pred             eeCCCccccc---ccCChHHHHHHHHHhcCC
Q psy11070         57 WSCPIKNCNK---RFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        57 ~~C~~~~C~~---~f~~~~~l~~h~~~h~~~   84 (148)
                      |.|.|..|.+   .|.....|..||+.|+|+
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            4555555543   355555555555555543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=8.6e-06  Score=37.52  Aligned_cols=30  Identities=27%  Similarity=0.616  Sum_probs=23.0

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      ++|||.|..+.|+.+|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            467888877788888888888887777664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1.2e-05  Score=34.13  Aligned_cols=26  Identities=31%  Similarity=0.514  Sum_probs=16.6

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      |.|+  .|+......+.|+.|++.|+++
T Consensus         2 YvC~--~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICE--ECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSSC
T ss_pred             cccc--ccCcccCCHHHHHHHHHHhcCC
Confidence            5566  6666666666666666666654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.4e-05  Score=36.76  Aligned_cols=29  Identities=14%  Similarity=0.297  Sum_probs=22.1

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      +|||.|...||..+|.+...|..|.+.|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            67888877777667888888888877764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=5.6e-06  Score=36.10  Aligned_cols=28  Identities=25%  Similarity=0.533  Sum_probs=16.4

Q ss_pred             CceeCCCcccccccCChHHHHHHH-HHhc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHM-VRHG   82 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~-~~h~   82 (148)
                      |||.|..+.|.|.|...+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            456666666666666655555555 4454

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2.2e-05  Score=33.32  Aligned_cols=27  Identities=22%  Similarity=0.584  Sum_probs=20.2

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhcCCCC
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~~~~k  116 (148)
                      |.|.  .|+....-++.|+.|+|+|++ ++
T Consensus         2 YvC~--~Cg~~C~KPSvL~KHIRsHT~-~R   28 (28)
T d1bboa1           2 YICE--ECGIRAKKPSMLKKHIRTHTD-VR   28 (28)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSS-CC
T ss_pred             cccc--ccCcccCCHHHHHHHHHHhcC-CC
Confidence            5677  777777777888888888877 53

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=2.2e-05  Score=32.45  Aligned_cols=26  Identities=35%  Similarity=0.701  Sum_probs=18.2

Q ss_pred             eCCCcccccccCChHHHHHHHHHhcCCC
Q psy11070         58 SCPIKNCNKRFTTLSNLKMHMVRHGKPL   85 (148)
Q Consensus        58 ~C~~~~C~~~f~~~~~l~~h~~~h~~~~   85 (148)
                      .|+  .|.++|.++..|+.|-+.|+|++
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCc--chHHHHHHhHhhhhccccccCCC
Confidence            366  77777777777777777777663

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.2e-05  Score=36.18  Aligned_cols=28  Identities=25%  Similarity=0.614  Sum_probs=23.2

Q ss_pred             ceecCcCCccc---ccCChHHHHHHHHHhcC
Q psy11070         86 TLCCEELGCGR---KFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        86 ~~~c~~~~C~~---~f~~~~~l~~h~~~h~~  113 (148)
                      -|.|.|..|.+   .|.....|..|+|+|+|
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCC
Confidence            46788888874   68888999999999998

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=2.1e-05  Score=33.47  Aligned_cols=29  Identities=24%  Similarity=0.613  Sum_probs=23.7

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +||.|..+.|.+.|.+.-.|.+|.-+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            47788777888888888888888888877

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.7e-05  Score=33.70  Aligned_cols=23  Identities=30%  Similarity=0.605  Sum_probs=19.8

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHh
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      ||.|..|+  |+|+...+|.+|++.
T Consensus         1 py~C~~Cn--F~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCN--FSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSS--CEESSHHHHHHHHHS
T ss_pred             Ccccceee--eeEeeccchhHhhhh
Confidence            68899988  689999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.6e-05  Score=37.16  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=18.1

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHh
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      -|||.|.+|+|  .|-.+.++.+|...
T Consensus         3 iKPYeC~~C~K--rFMWRDSF~RH~~~   27 (44)
T d2csha2           3 IKPYECNICAK--RFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCEECSSSCC--EESCHHHHHHHHHH
T ss_pred             CCceeccchhh--hhhhHHHHHHhhhh
Confidence            67788888777  57777777777554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=9.6e-06  Score=35.34  Aligned_cols=28  Identities=25%  Similarity=0.463  Sum_probs=21.8

Q ss_pred             CceeCCCCCCCcccccHHHHHHHH-HhhC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAV-ANNS  143 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~-~~h~  143 (148)
                      |||.|...|+.+.|...+..-+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            688888866666788888888887 6665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.5e-05  Score=33.25  Aligned_cols=27  Identities=15%  Similarity=0.354  Sum_probs=20.8

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +||+|..|.  |--++.++|.+|++..++
T Consensus         1 rPFkC~~Cs--FDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCS--FDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSS--CEESSHHHHHHHHHHHHS
T ss_pred             CCcccceec--ccccCcchHHHHHHHHcc
Confidence            588888887  456888888888876554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=5.7e-05  Score=31.95  Aligned_cols=29  Identities=31%  Similarity=0.740  Sum_probs=21.0

Q ss_pred             CCceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         54 QQLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        54 ~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +..|.|.  .|...|.+.-.|..||..|+|+
T Consensus         2 eqvftcs--~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCS--VCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeH--HHHHHHHHHHhheeeeecccCC
Confidence            3457777  7777777777777777777764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=3.5e-05  Score=31.34  Aligned_cols=23  Identities=17%  Similarity=0.235  Sum_probs=12.9

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |+|..|.+  +|..++.|.+|++.|
T Consensus         1 ykcglcer--sfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCER--SFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCC--BCSSHHHHHHHGGGT
T ss_pred             CcccchHH--HHHHHHHHHHHHHhh
Confidence            45555555  455555555555555

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=8.4e-05  Score=30.68  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=20.0

Q ss_pred             ecCcCCcccccCChHHHHHHHHHhcCCCC
Q psy11070         88 CCEELGCGRKFQTMKQYSTHLKEHSNVSA  116 (148)
Q Consensus        88 ~c~~~~C~~~f~~~~~l~~h~~~h~~~~k  116 (148)
                      +|+  .|.+.|.++.-|+.|-|.|+| ++
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htg-ek   27 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTG-EK   27 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSS-CC
T ss_pred             cCc--chHHHHHHhHhhhhccccccC-CC
Confidence            477  788888888888888888887 54

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00016  Score=30.20  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=17.0

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      +||+|.  .|.+.-...++|..|++.|.
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc--cccchhcchhhHhhhhhccc
Confidence            566666  66666666666666666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=0.00015  Score=33.49  Aligned_cols=25  Identities=24%  Similarity=0.630  Sum_probs=12.3

Q ss_pred             ceecCcCCcccccCChHHHHHHHHHhc
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      .|.|.  .|++.|.+.++|--|++.|.
T Consensus         5 ~~~C~--~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCS--FCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECT--TTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCC--CCCCccCCcccccchHhhhc
Confidence            34454  45555555555555554444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00023  Score=30.00  Aligned_cols=28  Identities=4%  Similarity=0.189  Sum_probs=20.2

Q ss_pred             CCceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        115 SAPYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       115 ~k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      +..|.|..|..  .|+++..|+.|+-.|+|
T Consensus         2 eqvftcs~cqe--~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQE--TFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCC--EESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHH--HHHHHHhheeeeecccC
Confidence            45677777776  57777777777777765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.23  E-value=0.00019  Score=33.07  Aligned_cols=28  Identities=25%  Similarity=0.580  Sum_probs=18.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +.|.|.  .|++.|.+...|-.||+.|..+
T Consensus         4 r~~~C~--~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCS--FCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECT--TTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCC--CCCCccCCcccccchHhhhcch
Confidence            456677  7777777777777777666543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.19  E-value=0.00017  Score=29.89  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=21.0

Q ss_pred             eeCCCcccccccCChHHHHHHHHHhc
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |.|.++.|++.|+.-..|+.|+..|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67777788888888888888887775

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.0003  Score=29.84  Aligned_cols=23  Identities=35%  Similarity=0.603  Sum_probs=12.1

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      ||.|.  .|..+....++|+.|+.+
T Consensus         2 py~cq--yc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQ--YCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHH
T ss_pred             Ccccc--ccccccccchhhhhhhhc
Confidence            45555  555555555555555544

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.11  E-value=0.00029  Score=30.28  Aligned_cols=30  Identities=17%  Similarity=0.512  Sum_probs=19.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHHHhcCC
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMVRHGKP   84 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~   84 (148)
                      +.|.|.++.|+-.|...-.|..|...|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            346666667777776666666776666654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00025  Score=28.72  Aligned_cols=19  Identities=32%  Similarity=0.496  Sum_probs=11.3

Q ss_pred             CcccccCChHHHHHHHHHh
Q psy11070         93 GCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~~h  111 (148)
                      .|.+.|..++.|.+|+++|
T Consensus         5 lcersfveksalsrhqrvh   23 (26)
T d1znfa_           5 LCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             SSCCBCSSHHHHHHHGGGT
T ss_pred             chHHHHHHHHHHHHHHHhh
Confidence            5556666666666665555

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00037  Score=32.38  Aligned_cols=23  Identities=26%  Similarity=0.528  Sum_probs=12.8

Q ss_pred             CCCceeCCCcccccccCChHHHHHH
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMH   77 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h   77 (148)
                      |-|||.|.  .|++.|-+..++.+|
T Consensus         2 GiKPYeC~--~C~KrFMWRDSF~RH   24 (44)
T d2csha2           2 GIKPYECN--ICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCEECS--SSCCEESCHHHHHHH
T ss_pred             CCCceecc--chhhhhhhHHHHHHh
Confidence            34555555  555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00047  Score=29.10  Aligned_cols=23  Identities=39%  Similarity=0.673  Sum_probs=12.6

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      ||.|.  .|+-.|+.+.+|..||..
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhh
Confidence            35555  555555555555555543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.71  E-value=0.00097  Score=28.82  Aligned_cols=21  Identities=24%  Similarity=0.418  Sum_probs=11.8

Q ss_pred             ceecCcCCcccccCChHHHHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHL  108 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~  108 (148)
                      ||.|.  .|++.|.+..-|.+|+
T Consensus         1 Pf~C~--~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCG--LCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECT--TTCCEESSHHHHHHHH
T ss_pred             Ccccc--cccchhhHHHHHHHHH
Confidence            45555  5555555555555554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.62  E-value=0.00078  Score=29.14  Aligned_cols=23  Identities=17%  Similarity=0.408  Sum_probs=15.4

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHh
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      ||.|.+|++  .|.++..|-+|+..
T Consensus         1 Pf~C~~C~R--~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNR--AFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCC--EESSHHHHHHHHTT
T ss_pred             Ccccccccc--hhhHHHHHHHHHHH
Confidence            577777776  57777766666554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.0016  Score=26.95  Aligned_cols=21  Identities=33%  Similarity=0.680  Sum_probs=12.5

Q ss_pred             ceeCCCcccccccCChHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHM   78 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~   78 (148)
                      ||.|.  .||+.|.++.+|..|.
T Consensus         1 pf~c~--kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHH
Confidence            45566  6666666666665553

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.17  E-value=0.0023  Score=25.77  Aligned_cols=22  Identities=27%  Similarity=0.821  Sum_probs=16.2

Q ss_pred             ceeCCCcccccccCChHHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      ||+|.  .|...|-++..|+.||.
T Consensus         2 pykcs--scsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCS--SCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECS--SSCCEESSHHHHHHHHH
T ss_pred             CCccc--HHHHHHHHHHHHHHHHH
Confidence            57777  77777777777777764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0039  Score=27.49  Aligned_cols=27  Identities=15%  Similarity=0.329  Sum_probs=20.4

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhCCC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNSKY  145 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~~~  145 (148)
                      .|.|..|||  .|.++-.+.+|...+.|+
T Consensus         4 afvcskcgk--tftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGK--TFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCC--EESCHHHHHHHHHHCCCC
T ss_pred             eeeeccccc--chhcchHHHHHhhhcCCC
Confidence            578888887  587777777887777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0035  Score=26.47  Aligned_cols=22  Identities=27%  Similarity=0.463  Sum_probs=10.2

Q ss_pred             ceecCcCCcccccCChHHHHHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      ||+|.  .|.......++|+.|++
T Consensus         2 py~cq--yc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQ--YCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHH
T ss_pred             Ccccc--ccccccccchhhhhhhh
Confidence            44444  44444444444444444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.02  E-value=0.0032  Score=25.32  Aligned_cols=22  Identities=18%  Similarity=0.341  Sum_probs=17.1

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHH
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      ||+|..|..  .|.++-.|+.|+-
T Consensus         2 pykcsscsq--qfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQ--QFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCC--EESSHHHHHHHHH
T ss_pred             CCcccHHHH--HHHHHHHHHHHHH
Confidence            788888886  5888888888864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.87  E-value=0.0052  Score=26.25  Aligned_cols=29  Identities=21%  Similarity=0.485  Sum_probs=21.5

Q ss_pred             CceecCcCCcccccCChHHHHHHHHHhcC
Q psy11070         85 LTLCCEELGCGRKFQTMKQYSTHLKEHSN  113 (148)
Q Consensus        85 ~~~~c~~~~C~~~f~~~~~l~~h~~~h~~  113 (148)
                      +.|.|..+.|+..|...+.|..|+-.|+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            34667666788888888888888777776

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.69  E-value=0.0048  Score=25.43  Aligned_cols=21  Identities=19%  Similarity=0.490  Sum_probs=10.6

Q ss_pred             ceecCcCCcccccCChHHHHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHL  108 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~  108 (148)
                      ||+|.  .||+.|-++.+|..|.
T Consensus         1 pf~c~--kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHH
Confidence            34455  5555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0097  Score=24.56  Aligned_cols=23  Identities=9%  Similarity=0.157  Sum_probs=12.3

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHhh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVANN  142 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~h  142 (148)
                      |.|+.|+-  ...+++.|..|++.-
T Consensus         3 ~qcphc~t--iiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDT--VIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSC--EESSHHHHHHHHHHT
T ss_pred             ccCCcchh--heeehhhhhHHhhhc
Confidence            55555553  345555555555543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0069  Score=25.12  Aligned_cols=24  Identities=17%  Similarity=0.319  Sum_probs=15.1

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhc
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      -+|+  .|....+.+.+|+.|.|+|-
T Consensus         3 ekc~--ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCS--ECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECS--SSSCEESSHHHHHHHHGGGC
T ss_pred             ccCc--ccccccCcHHHHHHhhcccc
Confidence            3566  66666666666666666664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0081  Score=28.76  Aligned_cols=25  Identities=16%  Similarity=0.113  Sum_probs=17.4

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      .|.|..|||  .|.....|+.|...|.
T Consensus         6 l~pCG~CgK--~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGK--VFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCC--CCSCHHHHHHHHHHHT
T ss_pred             eeecccccc--ccCCHHHHhHhHHhcC
Confidence            466777776  4777777777776665

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.012  Score=24.54  Aligned_cols=23  Identities=22%  Similarity=0.499  Sum_probs=16.4

Q ss_pred             eCCCcccccccCChHHHHHHHHH
Q psy11070         58 SCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        58 ~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      .|.++.|++.|.....|..|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            46666888888887777777653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.011  Score=24.78  Aligned_cols=22  Identities=23%  Similarity=0.439  Sum_probs=12.7

Q ss_pred             ceecCcCCcccccCChHHHHHHHH
Q psy11070         86 TLCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        86 ~~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      ||+|.  .|.....+.++|..|++
T Consensus         2 PFkC~--~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCN--YCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHH
T ss_pred             Ccccc--eecccccCcchHHHHHH
Confidence            55555  55555555566655554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.25  E-value=0.011  Score=24.27  Aligned_cols=26  Identities=27%  Similarity=0.586  Sum_probs=16.4

Q ss_pred             eecCcCCcccccCChHHHHHHHHHhc
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKEHS  112 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~h~  112 (148)
                      |.|-.+.|++.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            34444467777777777777766654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.17  E-value=0.012  Score=23.71  Aligned_cols=22  Identities=36%  Similarity=0.753  Sum_probs=16.9

Q ss_pred             eeCCCcccccccCChHHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      |.|+  .|-+.|.++.++..|.+.
T Consensus         2 ypcp--~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCP--FCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECT--TTCCEESCHHHHHHHHHH
T ss_pred             cCCc--hhhHHhccccCceEEEEE
Confidence            6677  888888888888777664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.022  Score=24.97  Aligned_cols=25  Identities=24%  Similarity=0.535  Sum_probs=20.0

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      .|.|.  .|+++|.+...+.+|-..-.
T Consensus         4 afvcs--kcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCS--KCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECS--SSCCEESCHHHHHHHHHHCC
T ss_pred             eeeec--ccccchhcchHHHHHhhhcC
Confidence            48899  99999999988888866543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.016  Score=23.93  Aligned_cols=25  Identities=20%  Similarity=0.403  Sum_probs=21.9

Q ss_pred             ceeCCCcccccccCChHHHHHHHHHhc
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVRHG   82 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~h~   82 (148)
                      |-+|+  .|.++...+..|+.|.+.|-
T Consensus         2 pekc~--ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGGC
T ss_pred             CccCc--ccccccCcHHHHHHhhcccc
Confidence            45799  99999999999999998873

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.026  Score=23.39  Aligned_cols=19  Identities=32%  Similarity=0.714  Sum_probs=9.1

Q ss_pred             CcccccCChHHHHHHHHHh
Q psy11070         93 GCGRKFQTMKQYSTHLKEH  111 (148)
Q Consensus        93 ~C~~~f~~~~~l~~h~~~h  111 (148)
                      .|++.|...++.+.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4444555544444444443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.032  Score=26.63  Aligned_cols=23  Identities=35%  Similarity=0.674  Sum_probs=17.9

Q ss_pred             eeCCCcccccccCChHHHHHHHHHh
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVRH   81 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~h   81 (148)
                      |.|.  .|+|.|.....|+.|...|
T Consensus         7 ~pCG--~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCG--LCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCT--TTCCCCSCHHHHHHHHHHH
T ss_pred             eecc--ccccccCCHHHHhHhHHhc
Confidence            6677  8888888888888777766

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.47  E-value=0.04  Score=22.62  Aligned_cols=22  Identities=18%  Similarity=0.523  Sum_probs=18.6

Q ss_pred             eecCcCCcccccCChHHHHHHHHH
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLKE  110 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~~  110 (148)
                      |+|+  .|+....+++.|..|++.
T Consensus         3 ~qcp--hc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCP--HCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECS--SSSCEESSHHHHHHHHHH
T ss_pred             ccCC--cchhheeehhhhhHHhhh
Confidence            6888  888888889888888874

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.04  Score=22.80  Aligned_cols=25  Identities=16%  Similarity=0.234  Sum_probs=19.3

Q ss_pred             eCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        119 MCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       119 ~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      .|+.-|+.+.|+..+.+++|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4555454458999999999999885

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.11  E-value=0.092  Score=21.85  Aligned_cols=27  Identities=22%  Similarity=0.372  Sum_probs=17.6

Q ss_pred             ceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        117 PYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       117 ~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      .|.|..=+++..|..+.++++|....+
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            466766666667777777777765443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.05  E-value=0.1  Score=21.67  Aligned_cols=25  Identities=40%  Similarity=0.771  Sum_probs=18.4

Q ss_pred             ceeCCCcccccccCChHHHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      .|.|..+.|+-+|..+.+++.|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            3677777888888888888777553

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.095  Score=21.81  Aligned_cols=22  Identities=27%  Similarity=0.856  Sum_probs=18.0

Q ss_pred             eeCCCcccccccCChHHHHHHHHH
Q psy11070         57 WSCPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        57 ~~C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      |.|.  .|++.+++...++.|+..
T Consensus         3 ftc~--hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCH--HCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCS--SSCCCCSSHHHHHHHHHH
T ss_pred             eech--hHHHHHhhccCceEEEee
Confidence            6788  888888888888888665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.48  E-value=0.1  Score=20.80  Aligned_cols=22  Identities=23%  Similarity=0.229  Sum_probs=10.3

Q ss_pred             eeCCCCCCCcccccHHHHHHHHHh
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVAN  141 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~~  141 (148)
                      |.|+.|=+  -|.++.++..|.++
T Consensus         2 ypcp~cfk--eftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFK--EFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCC--EESCHHHHHHHHHH
T ss_pred             cCCchhhH--HhccccCceEEEEE
Confidence            44555544  34455554444443

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.90  E-value=0.14  Score=22.03  Aligned_cols=22  Identities=23%  Similarity=0.590  Sum_probs=16.7

Q ss_pred             CCCcccccccCChHHHHHHHHH
Q psy11070         59 CPIKNCNKRFTTLSNLKMHMVR   80 (148)
Q Consensus        59 C~~~~C~~~f~~~~~l~~h~~~   80 (148)
                      |.|..|+..|-....|..|+..
T Consensus         4 ChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           4 CRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHH
T ss_pred             ccccccccccCCHHHHHHHccc
Confidence            6677788888888888777765

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=90.57  E-value=0.069  Score=32.93  Aligned_cols=41  Identities=12%  Similarity=0.153  Sum_probs=30.9

Q ss_pred             hHHHHHHHHHhc--CCC----CceeCCCCCCCcccccHHHHHHHHHhhCC
Q psy11070        101 MKQYSTHLKEHS--NVS----APYMCDYKGVCMSLTLKISFVKAVANNSK  144 (148)
Q Consensus       101 ~~~l~~h~~~h~--~~~----k~~~C~~c~~~~~f~~~~~l~~h~~~h~~  144 (148)
                      -..|..|++...  |-+    +-|+|..||+   +....+|.+|++.|.-
T Consensus       124 GgrlieHiK~~m~~GqDyvFWQFYKCe~CgK---YvDie~~~~H~k~HG~  170 (218)
T d2czra1         124 GAALVNHIKNNALAGQDYIFWQFYKCEECGK---YVDIENLEAHLREHGI  170 (218)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCC---EEEGGGHHHHHHTTTC
T ss_pred             hHHHHHHHHhccccCcceEEEEEeehhhcCc---eecHHHHHHHHHHcCc
Confidence            367888987443  201    3479999997   8889999999999863

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.83  E-value=0.14  Score=22.09  Aligned_cols=22  Identities=27%  Similarity=0.569  Sum_probs=17.8

Q ss_pred             ceeCCCcccccccCChHHHHHHHH
Q psy11070         56 LWSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        56 ~~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      .|.|.  -||-+|.+.+.|..|+.
T Consensus         8 rf~c~--pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCL--PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCT--TTCCBCSCHHHHHHHTT
T ss_pred             ceecc--ccceeecChhHHHhhhh
Confidence            37788  89999988888888754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.09  E-value=0.38  Score=20.95  Aligned_cols=26  Identities=15%  Similarity=0.227  Sum_probs=13.8

Q ss_pred             CceeCCCCCCCcccccHHHHHHHHHhhC
Q psy11070        116 APYMCDYKGVCMSLTLKISFVKAVANNS  143 (148)
Q Consensus       116 k~~~C~~c~~~~~f~~~~~l~~h~~~h~  143 (148)
                      -.|.|.+|.+  .+...+++-+|--+-+
T Consensus         7 ~~yRC~~C~r--~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           7 HTYRCKVCSR--VYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TEEECTTTCC--EESSHHHHHHHHHHHS
T ss_pred             cEEEeehhhH--HHHHHHHHHHHHHhhc
Confidence            3455666655  4555555555544433

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.77  E-value=0.59  Score=21.96  Aligned_cols=23  Identities=30%  Similarity=0.530  Sum_probs=10.7

Q ss_pred             CceeCCCcccccccCChHHHHHHHH
Q psy11070         55 QLWSCPIKNCNKRFTTLSNLKMHMV   79 (148)
Q Consensus        55 k~~~C~~~~C~~~f~~~~~l~~h~~   79 (148)
                      .|-.|+  .|+-...+..+|.+|..
T Consensus        23 qpatcp--ic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCP--ICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHHH
T ss_pred             CCCCCc--hHHHHHHHHHHHHHHHH
Confidence            344444  44444444444444443

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.42  E-value=0.6  Score=22.51  Aligned_cols=31  Identities=26%  Similarity=0.456  Sum_probs=21.6

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHH-hcC
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVR-HGK   83 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~-h~~   83 (148)
                      --+||.|-+.+|.-.|....+|..|.+. |..
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s   48 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS   48 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhh
Confidence            3467777777777778777777777654 543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=0.32  Score=24.70  Aligned_cols=38  Identities=24%  Similarity=0.493  Sum_probs=22.8

Q ss_pred             CCCceeCCCcccccccCChHHHHHHHHHhcCCCceecCcCCcccc
Q psy11070         53 KQQLWSCPIKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRK   97 (148)
Q Consensus        53 ~~k~~~C~~~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~   97 (148)
                      ....|.|+  .|+++|.....+.   ..-.....|.|.  .|+..
T Consensus        11 ~~~~y~Cp--~C~~~ys~Lda~~---L~d~~~~~F~C~--~C~~e   48 (62)
T d1vd4a_          11 NRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCT--FCHTE   48 (62)
T ss_dssp             SSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCS--SSCCB
T ss_pred             cCCceECC--CCCCCcchhhHHH---hcCcCCCeEEec--CCCCE
Confidence            34558888  8888877655432   233334457777  77643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.69  E-value=0.17  Score=26.26  Aligned_cols=21  Identities=5%  Similarity=-0.123  Sum_probs=11.7

Q ss_pred             eeCCCCCCCcccccHHHHHHHHH
Q psy11070        118 YMCDYKGVCMSLTLKISFVKAVA  140 (148)
Q Consensus       118 ~~C~~c~~~~~f~~~~~l~~h~~  140 (148)
                      |-|..|++  .|.+...|..|++
T Consensus        16 fYCv~C~K--~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACAR--YFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTE--ECSSHHHHHHHTT
T ss_pred             EecccccC--ccCCHHHHHHHHc
Confidence            55666655  4555555555543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.35  E-value=0.19  Score=26.02  Aligned_cols=21  Identities=29%  Similarity=0.596  Sum_probs=13.6

Q ss_pred             eecCcCCcccccCChHHHHHHHH
Q psy11070         87 LCCEELGCGRKFQTMKQYSTHLK  109 (148)
Q Consensus        87 ~~c~~~~C~~~f~~~~~l~~h~~  109 (148)
                      |-|.  .|++.|.+...|..|.+
T Consensus        16 fYCv--~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCL--ACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEET--TTTEECSSHHHHHHHTT
T ss_pred             Eecc--cccCccCCHHHHHHHHc
Confidence            5566  66666666666666654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.92  E-value=1.3  Score=20.79  Aligned_cols=26  Identities=15%  Similarity=0.266  Sum_probs=23.2

Q ss_pred             CCCceecCcCCcccccCChHHHHHHHHH
Q psy11070         83 KPLTLCCEELGCGRKFQTMKQYSTHLKE  110 (148)
Q Consensus        83 ~~~~~~c~~~~C~~~f~~~~~l~~h~~~  110 (148)
                      .+.|-.|+  .|+....++.+|.+|+..
T Consensus        21 s~qpatcp--ic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCP--ICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECT--TTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCc--hHHHHHHHHHHHHHHHHH
Confidence            36788999  999999999999999874