Psyllid ID: psy11165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQTDCKVPG
Secondary Structure (PSIPRED)
cHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHcccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccccccccHHHHHHHHccEEEEEEEcccccccccccEEEEEccccccccccccccEEccccccccccccccccccccccEEEEEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
HHHHHHHHHHccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEccHHHHHHHHHHHHccccccEEEccEcccEEEccEEccHHHcccHHHHHHHHHHHHHHHHHHHHEEEEEcccEEEEEEccccccHHHHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEHHHHHHHHHHHHHHEEEEEEEEcccccccccccEcccccEEEEEEEEEEEccccccccc
Coil and Loop (DISEMBL)
MLLDQWRKKATLYSTRVLLvplgddfryersEEWDAQMINYEALFAHlnsqpsynvhasfgTLADYFDTLKkakdersfpslsgdfftyadkddnywsgyytsrpfykrMDRELSGILRAADILFTLAWRGSDMIKRKYLkkiplqgnfypmpsaafiEDTGRRLSLLSAQSLgvaclkpgqievtmpcdarvVGLNLGeviqdrrlnqdderglgqgvmdniptLTLFRIVLETRqtdckvpg
Flexible Loop (DISEMBL)
mlldqwrkkatlystrvllvplgdDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKdersfpslsgdfftyadkddnywsGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLgeviqdrrlnqdderglgqgvmdniptLTLFRIVLetrqtdckvpg
Low Complexity Region (SEG)
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQTDCKVPG
Disordered region (IsUnstruct)
*****WRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETR********
Disordered Region (DISOPRED)
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL***********
Disordered Region (DISEMBL)
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQTDCKVPG
Disordered Region (DISPRO)
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQ*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQTDCKVPG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
Q24451	1108	Alpha-mannosidase 2 OS=Dr	yes	N/A	0.553	0.121	0.589	3e-44
P27046	1150	Alpha-mannosidase 2 OS=Mu	yes	N/A	0.557	0.118	0.584	4e-43
Q16706	1144	Alpha-mannosidase 2 OS=Ho	yes	N/A	0.557	0.118	0.584	8e-42
Q8BRK9	1152	Alpha-mannosidase 2x OS=M	no	N/A	0.651	0.138	0.494	1e-41
P49641	1150	Alpha-mannosidase 2x OS=H	no	N/A	0.524	0.111	0.574	1e-40
P28494	489	Alpha-mannosidase 2 (Frag	no	N/A	0.459	0.229	0.627	1e-37
Q54KN4	994	Alpha-mannosidase F OS=Di	yes	N/A	0.504	0.123	0.366	6e-16
Q1ZXI8	1123	Alpha-mannosidase E OS=Di	no	N/A	0.459	0.099	0.338	5e-13
Q54YF7	1035	Alpha-mannosidase B OS=Di	no	N/A	0.483	0.114	0.305	5e-13
Q54YC4	1222	Alpha-mannosidase D OS=Di	no	N/A	0.459	0.091	0.330	1e-12

>sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2

 Score =  178 bits (452), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 500 RAAEMLS--AWHSWDGMAR 516

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 1EC: 4

>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2

 Score =  174 bits (442), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 104/142 (73%), Gaps = 6/142 (4%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           MLLDQ+RKK+ L+ T+VLL PLGDDFR+    EWD Q  NYE LF+++NSQP   V   F
Sbjct: 401 MLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQPHLKVKIQF 460

Query: 61  GTLADYFDTLKKA------KDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
           GTL+DYFD L+KA        +  FP+LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR +
Sbjct: 461 GTLSDYFDALEKAVAAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIM 520

Query: 115 SGILRAADILFTLAWRGSDMIK 136
              +RAA+IL+ LA + +   K
Sbjct: 521 ESRIRAAEILYQLALKQAQKYK 542

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 4

>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2

 Score =  170 bits (431), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 101/142 (71%), Gaps = 6/142 (4%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           MLLDQ+RKK+ L+ T+VLL PLGDDFRY    EWD Q  NY+ LF ++NSQ  + V   F
Sbjct: 402 MLLDQYRKKSKLFRTKVLLAPLGDDFRYCEYTEWDLQFKNYQQLFDYMNSQSKFKVKIQF 461

Query: 61  GTLADYFDTLKKA------KDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
           GTL+D+FD L KA      K +  FP LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR +
Sbjct: 462 GTLSDFFDALDKADETQRDKGQSMFPVLSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIM 521

Query: 115 SGILRAADILFTLAWRGSDMIK 136
              LRAA+IL+  A R +   K
Sbjct: 522 ESHLRAAEILYYFALRQAHKYK 543

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 4

>sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2

 Score =  169 bits (429), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/174 (49%), Positives = 115/174 (66%), Gaps = 15/174 (8%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +LLDQ+RKK+ L+ + VLLVPLGDDFRY++ +EWDAQ  NY+ LF  LNS+P ++V A F
Sbjct: 402 LLLDQYRKKSRLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPEFHVQAQF 461

Query: 61  GTLADYFDTLKK------AKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
           GTL++YFD L K            FP LSGDFF+YAD++D+YW+GYYTSRPFYK +DR L
Sbjct: 462 GTLSEYFDALYKRTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVL 521

Query: 115 SGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLL 168
              LR A+IL++LA          + ++  L G  YP+   A + +  R L L 
Sbjct: 522 EAHLRGAEILYSLAL--------AHARRSGLAGQ-YPLSDFALLTEARRTLGLF 566

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 4

>sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3

 Score =  166 bits (420), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/134 (57%), Positives = 100/134 (74%), Gaps = 6/134 (4%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +LLDQ+RKK+ L+ + VLLVPLGDDFRY++ +EWDAQ  NY+ LF   NS+P+ +V A F
Sbjct: 402 LLLDQYRKKSQLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFFNSRPNLHVQAQF 461

Query: 61  GTLADYFDTLKK------AKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
           GTL+DYFD L K            FP LSGDFF+YAD++D+YW+GYYTSRPFYK +DR L
Sbjct: 462 GTLSDYFDALYKRTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVL 521

Query: 115 SGILRAADILFTLA 128
              LR A++L++LA
Sbjct: 522 EAHLRGAEVLYSLA 535

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 4

>sp|P28494|MA2A1_RAT Alpha-mannosidase 2 (Fragment) OS=Rattus norvegicus GN=Man2a1 PE=1 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 90/118 (76%), Gaps = 6/118 (5%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           MLLDQ+RKK+ L+ T+VLL PLGDDFR+    EWD Q  NYE LF+++NSQP   V   F
Sbjct: 368 MLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQYRNYEQLFSYMNSQPHLKVKIQF 427

Query: 61  GTLADYFDTLKKA------KDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDR 112
           GTL+DYFD L+K+        +  FP+LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR
Sbjct: 428 GTLSDYFDALEKSVAAEKKGGQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDR 485

Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 4

>sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium discoideum GN=manF PE=3 SV=1

 Score = 84.7 bits (208), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 2   LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPS---YNVHA 58
           +++  R ++  Y +  +L+P+G DF ++ + +   QM   + L A +N Q +    NV  
Sbjct: 241 MIELARNRSVFYKSPHVLIPMGGDFAFKNAYKSFEQM---DQLVASINGQHANGESNVIC 297

Query: 59  SFGTLADYF-DTLKKAKDER-SFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSG 116
            + TLAD+F DT+    + + SF     DFF YAD  + YW+GYYTSRP  K  +R +S 
Sbjct: 298 QYSTLADFFSDTINWHNENKVSFNYYDSDFFPYADDSNTYWTGYYTSRPLLKGYERHVSS 357

Query: 117 ILRAADILFTL 127
            LR+A+IL  L
Sbjct: 358 KLRSAEILSAL 368

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q1ZXI8|MANE_DICDI Alpha-mannosidase E OS=Dictyostelium discoideum GN=manE PE=3 SV=1

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 18/130 (13%)

Query: 15  TRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNV-HASFGTLADYF------ 67
           + +L++PLGDDFRY  ++  +   ++ E L    +++  YN+    + T+ +YF      
Sbjct: 248 SSILMIPLGDDFRYSNAK--NEFSVSKEWLKVIQDNKEKYNIKEIKYATIDEYFIALEDE 305

Query: 68  --DTLKKAKDERSFPSLSG-------DFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
             + L K  +E      S        DFF Y+  D  YW+GYYT+RP  KR+ RE S + 
Sbjct: 306 FMNKLGKTVEENLKTGFSSTLSLYNKDFFPYSTGDLEYWTGYYTTRPLLKRLIRESSLLQ 365

Query: 119 RAADILFTLA 128
           +++DIL+TLA
Sbjct: 366 KSSDILYTLA 375

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q54YF7|MANB_DICDI Alpha-mannosidase B OS=Dictyostelium discoideum GN=manB PE=3 SV=1

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 16/134 (11%)

Query: 7   RKKATLYSTRVLLVPLGDDFRYER-SEEWDAQMINYEALFAHLNSQPSYNVHASFGTLAD 65
           ++++ LY    LL+P G+DFR++  S E+D    N + L  ++NS  S+ V   + TL +
Sbjct: 286 QQRSQLYRHNNLLIPFGNDFRFQNASLEFD----NMDKLITYINSNSSWGVTIQYATLNE 341

Query: 66  YFDTLKKAKDERSFPSLSG-DFFTYA----------DKDDNYWSGYYTSRPFYKRMDREL 114
           YF+ ++  +    +  + G D F Y           +   N+WSGYYTS P  K+  R+ 
Sbjct: 342 YFEKVESIEPPVEYADIVGQDLFVYTMCLASDYQAFNTCANWWSGYYTSYPLLKQTARDS 401

Query: 115 SGILRAADILFTLA 128
             +LR  ++L++L+
Sbjct: 402 DSLLRVGEMLYSLS 415

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q54YC4|MAND_DICDI Alpha-mannosidase D OS=Dictyostelium discoideum GN=manD PE=3 SV=1

 Score = 73.9 bits (180), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 27/139 (19%)

Query: 15  TRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNV-HASFGTLADYF------ 67
           + +L++PLGDDFRY  ++   +  ++ E + A  +++  YN+    + TL +YF      
Sbjct: 283 SNILMIPLGDDFRYSNAKTEFS--VSKEWVKALQDNKEYYNIKEIKYATLDEYFIALEDS 340

Query: 68  -----------------DTLKKAKDERSFPSL-SGDFFTYADKDDNYWSGYYTSRPFYKR 109
                            +T     DE S  SL + DFF Y+  +  YW+GYYT+RP  KR
Sbjct: 341 FLRNNKFGKSRKQNVYTETFSDGDDEVSALSLYNKDFFPYSTGNLEYWTGYYTTRPLLKR 400

Query: 110 MDRELSGILRAADILFTLA 128
           + RE S + +++DIL+TLA
Sbjct: 401 LIRESSLLQKSSDILYTLA 419

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
195107853	1118	GI24010 [Drosophila mojavensis] gi|19391	0.528	0.115	0.631	2e-43
91086213	1133	PREDICTED: similar to mannosidase alpha	0.459	0.098	0.635	2e-43
195388676	1116	GJ23640 [Drosophila virilis] gi|19415109	0.528	0.115	0.624	7e-43
195572284	1108	GD18615 [Drosophila simulans] gi|1942000	0.553	0.121	0.589	2e-42
442618201	1109	alpha mannosidase II, isoform B [Drosoph	0.553	0.121	0.589	2e-42
195330420	1108	GM23804 [Drosophila sechellia] gi|194120	0.553	0.121	0.589	2e-42
194741912	1104	GF17213 [Drosophila ananassae] gi|190626	0.553	0.122	0.589	2e-42
24645354	1108	alpha mannosidase II, isoform A [Drosoph	0.553	0.121	0.589	2e-42
517481	1108	putative golgi alpha-mannosidase II [Dro	0.553	0.121	0.589	2e-42
192988534	1045	Chain A, Golgi Mannosidase Ii D204a Cata	0.553	0.129	0.589	2e-42

>gi|195107853|ref|XP_001998508.1| GI24010 [Drosophila mojavensis] gi|193915102|gb|EDW13969.1| GI24010 [Drosophila mojavensis]

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 103/133 (77%), Gaps = 4/133 (3%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           ML+DQW+KKA LY T VLL+PLGDDFRY+++ EWD Q +NYE LF H+N  P +NV A F
Sbjct: 385 MLVDQWKKKAELYRTNVLLIPLGDDFRYKQNVEWDVQRVNYEKLFEHINGNPRFNVQAQF 444

Query: 61  GTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRA 120
           GTL +YF+ + K K  +SFPSLSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +RA
Sbjct: 445 GTLNEYFNEVHKTK--QSFPSLSGDFFTYADRADNYWSGYYTSRPYHKRMDRVLMHYVRA 502

Query: 121 ADILFTLAWRGSD 133
           A++L   AW   D
Sbjct: 503 AEMLH--AWHNWD 513

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086213|ref|XP_972030.1| PREDICTED: similar to mannosidase alpha class 2a [Tribolium castaneum] gi|270009868|gb|EFA06316.1| hypothetical protein TcasGA2_TC009186 [Tribolium castaneum]

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/129 (63%), Positives = 102/129 (79%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +LLDQ+RKK+ LY T V+L PLGDDFRY+ S EWD Q  NY+ LF ++N+  + NV A F
Sbjct: 396 LLLDQYRKKSKLYKTNVVLAPLGDDFRYDHSTEWDVQFRNYQKLFDYMNANLNLNVQAQF 455

Query: 61  GTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRA 120
           GTL+DYFD + K + +  FPSLSGDFFTYAD+DD+YWSGYYTSRPFYKRMDR L   +RA
Sbjct: 456 GTLSDYFDAVHKERKDNDFPSLSGDFFTYADRDDHYWSGYYTSRPFYKRMDRILLANIRA 515

Query: 121 ADILFTLAW 129
           A+I+ TLA+
Sbjct: 516 AEIILTLAY 524

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195388676|ref|XP_002053005.1| GJ23640 [Drosophila virilis] gi|194151091|gb|EDW66525.1| GJ23640 [Drosophila virilis]

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 104/133 (78%), Gaps = 4/133 (3%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           ML+DQW+KKA LY T VLLVPLGDDFRY+++ EWD Q +NYE LF H+N  P++NV A F
Sbjct: 384 MLVDQWKKKAELYRTNVLLVPLGDDFRYKQNVEWDVQRVNYEKLFEHINGNPNFNVEAQF 443

Query: 61  GTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRA 120
           GTL +YF+ + +    ++FPSLSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   LRA
Sbjct: 444 GTLNEYFEAVHQTG--QNFPSLSGDFFTYADRADNYWSGYYTSRPYHKRMDRVLMHYLRA 501

Query: 121 ADILFTLAWRGSD 133
           A++L   AW+  D
Sbjct: 502 AEMLH--AWQNWD 512

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195572284|ref|XP_002104126.1| GD18615 [Drosophila simulans] gi|194200053|gb|EDX13629.1| GD18615 [Drosophila simulans]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 500 RAAEMLS--AWHSWDGMAR 516

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442618201|ref|NP_001262413.1| alpha mannosidase II, isoform B [Drosophila melanogaster] gi|440217245|gb|AGB95795.1| alpha mannosidase II, isoform B [Drosophila melanogaster]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 381 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 440

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 441 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 500

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 501 RAAEMLS--AWHSWDGMAR 517

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195330420|ref|XP_002031902.1| GM23804 [Drosophila sechellia] gi|194120845|gb|EDW42888.1| GM23804 [Drosophila sechellia]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 500 RAAEMLS--AWHSWDGMAR 516

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194741912|ref|XP_001953431.1| GF17213 [Drosophila ananassae] gi|190626490|gb|EDV42014.1| GF17213 [Drosophila ananassae]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 107/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           ML+DQW+KKA LY T VLLVPLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 377 MLVDQWKKKAELYRTNVLLVPLGDDFRFKQNTEWDVQRVNYEKLFEHINSQAHFNVEAQF 436

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YF+ + +A+   + +FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 437 GTLHEYFNAVHQAEALGQTAFPTLSGDFFTYADRTDNYWSGYYTSRPYHKRMDRVLMHYV 496

Query: 119 RAADILFTLAWRGSDMIKR 137
           R+A++L   AW   D + R
Sbjct: 497 RSAEMLS--AWHSWDGMAR 513

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24645354|ref|NP_524291.2| alpha mannosidase II, isoform A [Drosophila melanogaster] gi|32130434|sp|Q24451.2|MAN2_DROME RecName: Full=Alpha-mannosidase 2; AltName: Full=Golgi alpha-mannosidase II; Short=AMan II; Short=Man II; AltName: Full=Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase gi|7299177|gb|AAF54375.1| alpha mannosidase II, isoform A [Drosophila melanogaster] gi|21428798|gb|AAM50118.1| GH03876p [Drosophila melanogaster]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 500 RAAEMLS--AWHSWDGMAR 516

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|517481|emb|CAA54732.1| putative golgi alpha-mannosidase II [Drosophila melanogaster]

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 500 RAAEMLS--AWHSWDGMAR 516

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|192988534|pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose gi|192988548|pdb|3CZN|A Chain A, Golgi Alpha-Mannosidase Ii (D204a Nucleophile Mutant) In Complex With Gnman5gn gi|192988550|pdb|3CZS|A Chain A, Golgi Alpha-Mannosidase Ii (D204a Nucleophile Mutant) gi|193506645|pdb|3BUD|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant With An Empty Active Site gi|193506646|pdb|3BUI|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Tris gi|193506648|pdb|3BUQ|A Chain A, Golgi Alpha-Mannosidase Ii D204a Catalytic Nucleophile Mutant With Bound Mannose. gi|193506649|pdb|3BVT|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Methyl (Alpha-D-Mannopyranosyl)-(1->3)-S-Alpha-D- Mannopyranoside gi|193506650|pdb|3BVU|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Methyl(Alpha-D-Mannopyranosyl)-(1->3)-S-[(Alpha-D- Mannopyranosyl)-(1- >6)]-Alpha-D-Mannopyranoside gi|193506651|pdb|3BVV|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Methyl Alpha-D-Mannopyranosyl-(1->3)-[6-Thio- Alpha-D-Mannopyranosyl-(1->6)]-Beta-D-Mannopyranoside gi|193506652|pdb|3BVW|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside gi|193506653|pdb|3BVX|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-(Alpha-D-Mannopyranosyl)- (1->3)- [(Alpha-D-Mannopyranosyl)-(1->6)-(Alpha-D- Mannopyranosyl)- (1->6)]-Beta-D-Mannopyranoside

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376

Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436

Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
FB|FBgn0011740	1108	alpha-Man-II "alpha Mannosidas	0.553	0.121	0.589	1.3e-63
MGI|MGI:104669	1150	Man2a1 "mannosidase 2, alpha 1	0.573	0.121	0.591	2.9e-60
UNIPROTKB|F1NKR1	1110	MAN2A1 "Uncharacterized protei	0.524	0.115	0.604	9.1e-60
UNIPROTKB|G3V7Y9	1148	Man2a1 "Alpha-mannosidase 2" [	0.573	0.121	0.585	1.3e-59
UNIPROTKB|J9NRT0	1096	MAN2A1 "Uncharacterized protei	0.573	0.127	0.585	2.2e-59
UNIPROTKB|F1P9C4	1107	MAN2A1 "Uncharacterized protei	0.573	0.126	0.585	2.3e-59
UNIPROTKB|F6V049	1150	MAN2A2 "Uncharacterized protei	0.524	0.111	0.604	2.8e-59
UNIPROTKB|E2QT95	1153	MAN2A2 "Uncharacterized protei	0.524	0.111	0.604	2.9e-59
ZFIN|ZDB-GENE-060526-31	1100	man2a1 "mannosidase, alpha, cl	0.516	0.114	0.562	3.3e-59
UNIPROTKB|F1N7T2	1145	MAN2A1 "Uncharacterized protei	0.573	0.122	0.571	3.5e-59

FB|FBgn0011740 alpha-Man-II "alpha Mannosidase II" [Drosophila melanogaster (taxid:7227)]

 Score = 452 (164.2 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
 Identities = 82/139 (58%), Positives = 106/139 (76%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct:   380 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 439

Query:    61 GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
             GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct:   440 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 499

Query:   119 RAADILFTLAWRGSDMIKR 137
             RAA++L   AW   D + R
Sbjct:   500 RAAEMLS--AWHSWDGMAR 516

GO:0000139 "Golgi membrane" evidence=ISS;NAS

GO:0004572 "mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity" evidence=ISS;NAS

GO:0006486 "protein glycosylation" evidence=ISS

GO:0006487 "protein N-linked glycosylation" evidence=NAS

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0005795 "Golgi stack" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0015923 "mannosidase activity" evidence=IDA

GO:0006517 "protein deglycosylation" evidence=IDA

GO:0035010 "encapsulation of foreign target" evidence=IMP

MGI|MGI:104669 Man2a1 "mannosidase 2, alpha 1" [Mus musculus (taxid:10090)]

 Score = 444 (161.4 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
 Identities = 87/147 (59%), Positives = 109/147 (74%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             MLLDQ+RKK+ L+ T+VLL PLGDDFR+    EWD Q  NYE LF+++NSQP   V   F
Sbjct:   401 MLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQPHLKVKIQF 460

Query:    61 GTLADYFDTLKKA-----KDERS-FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L+KA     K  +S FP+LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR +
Sbjct:   461 GTLSDYFDALEKAVAAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIM 520

Query:   115 SGILRAADILFTLAWRGSDMIK-RKYL 140
                +RAA+IL+ LA + +   K  K+L
Sbjct:   521 ESRIRAAEILYQLALKQAQKYKINKFL 547

GO:0000139 "Golgi membrane" evidence=IDA

GO:0001701 "in utero embryonic development" evidence=IGI

GO:0001889 "liver development" evidence=IGI

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

GO:0004572 "mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0006491 "N-glycan processing" evidence=IGI

GO:0007005 "mitochondrion organization" evidence=IGI

GO:0007033 "vacuole organization" evidence=IGI

GO:0007585 "respiratory gaseous exchange" evidence=IGI

GO:0008152 "metabolic process" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015923 "mannosidase activity" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA

GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IGI

UNIPROTKB|F1NKR1 MAN2A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 428 (155.7 bits), Expect = 9.1e-60, Sum P(2) = 9.1e-60
 Identities = 81/134 (60%), Positives = 103/134 (76%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             M+LDQ+RKK+ L+ T+VLL PLGDDFRY  S EWD Q  NY+ LF ++N+ P ++V A F
Sbjct:   361 MILDQYRKKSKLFRTKVLLAPLGDDFRYAESSEWDQQYQNYQKLFDYMNTHPEFHVKAQF 420

Query:    61 GTLADYFDTLKKAKD--ERS----FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYF+ L+K  +  E S    FP LSGDFFTYAD+D +YWSGY+TSRPFYKR+DR L
Sbjct:   421 GTLSDYFEALRKESNLGEGSSSPLFPVLSGDFFTYADRDHHYWSGYFTSRPFYKRLDRVL 480

Query:   115 SGILRAADILFTLA 128
                LRAA+IL++LA
Sbjct:   481 ESHLRAAEILYSLA 494

GO:0004559 "alpha-mannosidase activity" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0006491 "N-glycan processing" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IEA

GO:0007033 "vacuole organization" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|G3V7Y9 Man2a1 "Alpha-mannosidase 2" [Rattus norvegicus (taxid:10116)]

 Score = 435 (158.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 86/147 (58%), Positives = 108/147 (73%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             MLLDQ+RKK+ L+ T+VLL PLGDDFR+    EWD Q  NYE LF+++NSQP   V   F
Sbjct:   401 MLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQYRNYEQLFSYMNSQPHLKVKIQF 460

Query:    61 GTLADYFDTLKKA-----KDERS-FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L+K+     K  +S FP+LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR +
Sbjct:   461 GTLSDYFDALEKSVAAEKKGGQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIM 520

Query:   115 SGILRAADILFTLAWRGSDMIK-RKYL 140
                LR A+IL+ LA + +   K  K+L
Sbjct:   521 ESRLRTAEILYHLALKQAQKYKINKFL 547

GO:0000139 "Golgi membrane" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0006491 "N-glycan processing" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IEA

GO:0007033 "vacuole organization" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

UNIPROTKB|J9NRT0 MAN2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 431 (156.8 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
 Identities = 86/147 (58%), Positives = 105/147 (71%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             MLLDQ+RKK+ L+ T V+L PLGDDFRY    EWD Q  NY+ LF ++NS P YNV   F
Sbjct:   354 MLLDQYRKKSKLFRTTVVLAPLGDDFRYCERTEWDHQFKNYQLLFDYMNSHPEYNVKIQF 413

Query:    61 GTLADYFDTLKK-----AKDERS-FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L K      K+ +S FP LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR L
Sbjct:   414 GTLSDYFDALDKEDVTSGKNSQSMFPVLSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIL 473

Query:   115 SGILRAADILFTLAWRGSDMIK-RKYL 140
                +RAA+IL+  A + +   K  K+L
Sbjct:   474 ESHIRAAEILYYFALKQAQKYKISKFL 500

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

UNIPROTKB|F1P9C4 MAN2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 431 (156.8 bits), Expect = 2.3e-59, Sum P(2) = 2.3e-59
 Identities = 86/147 (58%), Positives = 105/147 (71%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             MLLDQ+RKK+ L+ T V+L PLGDDFRY    EWD Q  NY+ LF ++NS P YNV   F
Sbjct:   365 MLLDQYRKKSKLFRTTVVLAPLGDDFRYCERTEWDHQFKNYQLLFDYMNSHPEYNVKIQF 424

Query:    61 GTLADYFDTLKK-----AKDERS-FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L K      K+ +S FP LSGDFFTYAD+DD+YWSGY+TSRPFYKRMDR L
Sbjct:   425 GTLSDYFDALDKEDVTSGKNSQSMFPVLSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIL 484

Query:   115 SGILRAADILFTLAWRGSDMIK-RKYL 140
                +RAA+IL+  A + +   K  K+L
Sbjct:   485 ESHIRAAEILYYFALKQAQKYKISKFL 511

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

UNIPROTKB|F6V049 MAN2A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 424 (154.3 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
 Identities = 81/134 (60%), Positives = 102/134 (76%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             +LLDQ+RKK+ L+ + VLLVPLGDDFRY++ +EWDAQ  NY+ LF  LNS+P  +V A F
Sbjct:   402 LLLDQYRKKSRLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPDLHVQAQF 461

Query:    61 GTLADYFDTL-KKAKDERS-----FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L KK   E       FP LSGDFF+YAD++D+YW+GYYTSRPFYK +DR L
Sbjct:   462 GTLSDYFDALYKKTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVL 521

Query:   115 SGILRAADILFTLA 128
                LR A+IL++LA
Sbjct:   522 EAHLRGAEILYSLA 535

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

UNIPROTKB|E2QT95 MAN2A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 424 (154.3 bits), Expect = 2.9e-59, Sum P(2) = 2.9e-59
 Identities = 81/134 (60%), Positives = 102/134 (76%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             +LLDQ+RKK+ L+ + VLLVPLGDDFRY++ +EWDAQ  NY+ LF  LNS+P  +V A F
Sbjct:   402 LLLDQYRKKSRLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPDLHVQAQF 461

Query:    61 GTLADYFDTL-KKAKDERS-----FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L KK   E       FP LSGDFF+YAD++D+YW+GYYTSRPFYK +DR L
Sbjct:   462 GTLSDYFDALYKKTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVL 521

Query:   115 SGILRAADILFTLA 128
                LR A+IL++LA
Sbjct:   522 EAHLRGAEILYSLA 535

GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

ZFIN|ZDB-GENE-060526-31 man2a1 "mannosidase, alpha, class 2A, member 1" [Danio rerio (taxid:7955)]

 Score = 406 (148.0 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
 Identities = 76/135 (56%), Positives = 98/135 (72%)

Query:     2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFG 61
             LLDQ+RKK+ L+ T+VLL PLGDDFRY  + EWD Q  NY+ LF ++NS P  +V A FG
Sbjct:   401 LLDQYRKKSKLFRTKVLLAPLGDDFRYTEAVEWDQQFENYQKLFDYMNSHPELHVKAQFG 460

Query:    62 TLADYFDTLKKAKD---------ERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDR 112
             T++DYF  L+K+             + P +SGDFFTYAD+DD+YWSGY+TSRPFYKRMDR
Sbjct:   461 TISDYFQALRKSTGMDPVGMNVGHLALPVVSGDFFTYADRDDHYWSGYFTSRPFYKRMDR 520

Query:   113 ELSGILRAADILFTL 127
              L   LRAA++L++L
Sbjct:   521 MLESYLRAAEVLYSL 535

GO:0003824 "catalytic activity" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0015923 "mannosidase activity" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N7T2 MAN2A1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 426 (155.0 bits), Expect = 3.5e-59, Sum P(2) = 3.5e-59
 Identities = 84/147 (57%), Positives = 106/147 (72%)

Query:     1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
             MLLDQ+RKK+ L+ T V+L PLGDDFRY    EWD Q  NY+ LF ++NS   YNV   F
Sbjct:   403 MLLDQYRKKSELFRTTVVLAPLGDDFRYTERTEWDHQFKNYQLLFDYMNSHSQYNVKIQF 462

Query:    61 GTLADYFDTLKK-----AKDERS-FPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
             GTL+DYFD L+K     +++ +S FP +SGDFFTYAD+DD+YWSGY+TSRPFYKRMDR L
Sbjct:   463 GTLSDYFDALEKEASASSRNSQSIFPVVSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIL 522

Query:   115 SGILRAADILFTLAWRGSDMIK-RKYL 140
                LRAA+IL+  A + +   K  K+L
Sbjct:   523 ESHLRAAEILYYFAMKQAKQYKISKFL 549

GO:0048286 "lung alveolus development" evidence=IEA

GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0007033 "vacuole organization" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IEA

GO:0006491 "N-glycan processing" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006013 "mannose metabolic process" evidence=IEA

GO:0004559 "alpha-mannosidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P27046	MA2A1_MOUSE	3, ., 2, ., 1, ., 1, 1, 4	0.5845	0.5573	0.1182	yes	N/A
Q24451	MAN2_DROME	3, ., 2, ., 1, ., 1, 1, 4	0.5899	0.5532	0.1218	yes	N/A
Q16706	MA2A1_HUMAN	3, ., 2, ., 1, ., 1, 1, 4	0.5845	0.5573	0.1188	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	244
cd10809	340	cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal	3e-56
PLN02701	1050	PLN02701, PLN02701, alpha-mannosidase	2e-53
cd11666	344	cd11666, GH38N_Man2A1, N-terminal catalytic domain	8e-43
cd11667	344	cd11667, GH38N_Man2A2, N-terminal catalytic domain	6e-41
PLN02701	1050	PLN02701, PLN02701, alpha-mannosidase	2e-28
pfam01074	269	pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam	1e-12
smart00872	79	smart00872, Alpha-mann_mid, Alpha mannosidase, mid	4e-11
pfam09261	82	pfam09261, Alpha-mann_mid, Alpha mannosidase, midd	4e-11
pfam07748	379	pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa	3e-08
cd00451	258	cd00451, GH38N_AMII_euk, N-terminal catalytic doma	1e-06
cd10786	251	cd10786, GH38N_AMII_like, N-terminal catalytic dom	3e-05

>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38)

 Score =  182 bits (464), Expect = 3e-56
 Identities = 63/103 (61%), Positives = 80/103 (77%), Gaps = 2/103 (1%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +LLDQ+RKK+ LY + V+L+PLGDDFRY+  EEWDAQ  NY+ LF ++NS P  NV   F
Sbjct: 238 LLLDQYRKKSQLYRSNVVLIPLGDDFRYDSDEEWDAQYDNYQKLFDYINSNPELNVEIQF 297

Query: 61  GTLADYFDTLKKA--KDERSFPSLSGDFFTYADKDDNYWSGYY 101
           GTL+DYF+ L+K    +   FP+LSGDFFTYAD+DD+YWSGYY
Sbjct: 298 GTLSDYFNALRKRTGTNTPGFPTLSGDFFTYADRDDDYWSGYY 340

This subfamily is represented by Golgi alpha-mannosidase II (GMII, also known as mannosyl-oligosaccharide 1,3- 1,6-alpha mannosidase, EC 3.2.1.114, Man2A1), a monomeric, membrane-anchored class II alpha-mannosidase existing in the Golgi apparatus of eukaryotes. GMII plays a key role in the N-glycosylation pathway. It catalyzes the hydrolysis of the terminal both alpha-1,3-linked and alpha-1,6-linked mannoses from the high-mannose oligosaccharide GlcNAc(Man)5(GlcNAc)2 to yield GlcNAc(Man)3(GlcNAc)2(GlcNAc, N-acetylglucosmine), which is the committed step of complex N-glycan synthesis. GMII is activated by zinc or cobalt ions and is strongly inhibited by swainsonine. Inhibition of GMII provides a route to block cancer-induced changes in cell surface oligosaccharide structures. GMII has a pH optimum of 5.5-6.0, which is intermediate between those of acidic (lysosomal alpha-mannosidase) and neutral (ER/cytosolic alpha-mannosidase) enzymes. GMII is a retaining glycosyl hydrolase of family GH38 that employs a two-step mechanism involving the formation of a covalent glycosyl enzyme complex; two carboxylic acids positioned within the active site act in concert: one as a catalytic nucleophile and the other as a general acid/base catalyst. This subfamily also includes human alpha-mannosidase 2x (MX, also known as mannosyl-oligosaccharide 1,3- 1,6-alpha mannosidase, EC 3.2.1.114, Man2A2). MX is enzymatically and functionally very similar to GMII, and is thought to also function in the N-glycosylation pathway. Also found in this subfamily is class II alpha-mannosidase encoded by Spodoptera frugiperda Sf9 cell. This alpha-mannosidase is an integral membrane glycoprotein localized in the Golgi apparatus. It shows high sequence homology with mammalian Golgi alpha-mannosidase II(GMII). It can hydrolyze p-nitrophenyl alpha-D-mannopyranoside (pNP-alpha-Man), and it is inhibited by swainsonine. However, the Sf9 enzyme is stimulated by cobalt and can hydrolyze (Man)5(GlcNAc)2 to (Man)3(GlcNAc)2, but it cannot hydrolyze GlcNAc(Man)5(GlcNAc)2, which is distinct from that of GMII. Thus, this enzyme has been designated as Sf9 alpha-mannosidase III (SfManIII). It probably functions in an alternate N-glycan processing pathway in Sf9 cells. Length = 340

>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase

 Score =  184 bits (469), Expect = 2e-53
 Identities = 77/141 (54%), Positives = 92/141 (65%), Gaps = 14/141 (9%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
            LLDQ+RKK+TLY T  LLVPLGDDFRY   +E +AQ  NY+ LF ++NS PS      F
Sbjct: 277 KLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKF 336

Query: 61  GTLADYFDTLKKAKDERS--------------FPSLSGDFFTYADKDDNYWSGYYTSRPF 106
           GTL DYF TL+   D  +              FPSLSGDFFTYAD+  +YWSGYY SRPF
Sbjct: 337 GTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPF 396

Query: 107 YKRMDRELSGILRAADILFTL 127
           +K +DR L   LRAA+ILF+ 
Sbjct: 397 FKAVDRVLEQTLRAAEILFSF 417

Length = 1050

>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38)

 Score =  147 bits (373), Expect = 8e-43
 Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 6/107 (5%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           MLLDQ+RKK+ L+ T+VLL PLGDDFRY    EWD Q  NY+ LF ++NS P  +V A F
Sbjct: 238 MLLDQYRKKSKLFRTKVLLAPLGDDFRYTEYTEWDQQFENYQKLFDYMNSHPELHVKAQF 297

Query: 61  GTLADYFDTLKKA------KDERSFPSLSGDFFTYADKDDNYWSGYY 101
           GTL+DYFD L+K+        + +FP LSGDFFTYAD+DD+YWSGY+
Sbjct: 298 GTLSDYFDALRKSTGMDPVGGQSAFPVLSGDFFTYADRDDHYWSGYF 344

This subfamily is represented by Golgi alpha-mannosidase II (GMII, also known as mannosyl-oligosaccharide 1,3- 1,6-alpha mannosidase, EC 3.2.1.114, Man2A1), a monomeric, membrane-anchored class II alpha-mannosidase existing in the Golgi apparatus of eukaryotes. GMII plays a key role in the N-glycosylation pathway. It catalyzes the hydrolysis of the terminal of both alpha-1,3-linked and alpha-1,6-linked mannoses from the high-mannose oligosaccharide GlcNAc(Man)5(GlcNAc)2 to yield GlcNAc(Man)3(GlcNAc)2(GlcNAc, N-acetylglucosmine), which is the committed step of complex N-glycan synthesis. GMII is activated by zinc or cobalt ions and is strongly inhibited by swainsonine. Inhibition of GMII provides a route to block cancer-induced changes in cell surface oligosaccharide structures. GMII has a pH optimum of 5.5-6.0, which is intermediate between those of acidic (lysosomal alpha-mannosidase) and neutral (ER/cytosolic alpha-mannosidase) enzymes. GMII is a retaining glycosyl hydrolase of family GH38 that employs a two-step mechanism involving the formation of a covalent glycosyl enzyme complex; two carboxylic acids positioned within the active site act in concert: one as a catalytic nucleophile and the other as a general acid/base catalyst. Length = 344

>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38)

 Score =  142 bits (360), Expect = 6e-41
 Identities = 62/107 (57%), Positives = 80/107 (74%), Gaps = 6/107 (5%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +LLDQ+RKK+ LY ++VLLVPLGDDFRY++ +EWDAQ +NY+ LF  LNS P  +V A F
Sbjct: 238 LLLDQYRKKSKLYRSKVLLVPLGDDFRYDKPQEWDAQFLNYQRLFDFLNSHPELHVQAQF 297

Query: 61  GTLADYFDTLKK------AKDERSFPSLSGDFFTYADKDDNYWSGYY 101
           GTL+DYFD L K            FP +SGDFF+YAD++D+YW+GYY
Sbjct: 298 GTLSDYFDALYKRTGVVPGMRPPGFPVVSGDFFSYADREDHYWTGYY 344

This subfamily is represented by human alpha-mannosidase 2x (MX, also known as mannosyl-oligosaccharide 1,3- 1,6-alpha mannosidase, EC 3.2.1.114, Man2A2). MX is enzymatically and functionally very similar to GMII (found in another subfamily), and as an isoenzyme of GMII. It is thought to also function in the N-glycosylation pathway. MX specifically hydrolyzes the same oligosaccharide substrate as does MII. It specifically removes two mannosyl residues from GlcNAc(Man)5(GlcNAc)2 to yield GlcNAc(Man)3(GlcNAc)2(GlcNAc, N-acetylglucosmine). Length = 344

>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase

 Score =  112 bits (282), Expect = 2e-28
 Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 17/105 (16%)

Query: 131 GSDMIKRKYLKKIPLQGNFYPMPSAAFIEDT-GRRLSLLSAQSLGVACLKPGQIEVTMPC 189
           G  M +R+   KIPLQGN+YPMPS AF++ + G+R S+ S QSLGVA LK G +E+ +  
Sbjct: 787 GFQMSRRETYDKIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIML-- 844

Query: 190 DARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLE 234
                         DRRL QDD RGLGQGVMDN P   +F ++LE
Sbjct: 845 --------------DRRLVQDDGRGLGQGVMDNRPMNVVFHLLLE 875

Length = 1050

>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLN-SQPSY-NVHA 58
            LLDQ +K A    T  +L P GD          D      + L  ++N           
Sbjct: 191 DLLDQAKKYADKTRTNHVLWPFGDG---------DGGGGPTDELLEYINRWNELPGLPKV 241

Query: 59  SFGTLADYFDTLKKAKDERSFPSLSGDFFTYA 90
            FGT +DYFD L+    E ++P+ SGDF TYA
Sbjct: 242 QFGTPSDYFDALE----EATWPTKSGDFPTYA 269

Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Length = 269

>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 96  YWSGYYTSRPFYKRMDRELSGILRAADILFTLAW 129
           Y  G YTSRP+ KR++R    +LRAA+ L  LA 
Sbjct: 1   YHRGTYTSRPYLKRLNRRAESLLRAAEELAALAA 34

Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase. Length = 79

>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 96  YWSGYYTSRPFYKRMDRELSGILRAADILFTLA-WRGSDMIKRKYLKKI 143
           Y  G YTSRP  KR++R+L  +LRAA++L +LA   G+      Y +++
Sbjct: 2   YHRGTYTSRPDIKRLNRKLESLLRAAELLASLASLLGNKGELDDYYEEL 50

Members of this family adopt a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. They are predominantly found in the enzyme alpha-mannosidase. Length = 82

>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 18/99 (18%)

Query: 120 AADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIED--TGRRLSLLSAQSLGVAC 177
             +        G    K       P +  +Y +PS  FI+D      +S+L+    GV+ 
Sbjct: 168 FYEDQN-----GVIERKLPTHPNTPWEAAYYEVPSHRFIDDSEASYGVSVLNDSKYGVSS 222

Query: 178 LKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLG 216
           L  GQ+E+++    R               + DD R L 
Sbjct: 223 LADGQLELSL---LRAPT--------YPDPSADDGRHLF 250

Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Length = 379

>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38)

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNS 50
             ++  +K++  Y T  +L+PLGDDFR+   +    Q  N + L A++NS
Sbjct: 212 EFVEYIKKRSKTYRTNHILIPLGDDFRF---KNASLQFSNMDKLIAYINS 258

The family corresponds to a group of eukaryotic class II alpha-mannosidases (AlphaMII), which contain Golgi alpha-mannosidases II (GMII), the major broad specificity lysosomal alpha-mannosidases (LAM, MAN2B1), the noval core-specific lysosomal alpha 1,6-mannosidases (Epman, MAN2B2), and similar proteins. GMII catalyzes the hydrolysis of the terminal both alpha-1,3-linked and alpha-1,6-linked mannoses from the high-mannose oligosaccharide GlcNAc(Man)5(GlcNAc)2 to yield GlcNAc(Man)3(GlcNAc)2 (GlcNAc, N-acetylglucosmine), which is the committed step of complex N-glycan synthesis. LAM is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. Different from LAM, Epman can efficiently cleave only the alpha 1,6-linked mannose residue from (Man)3GlcNAc, but not (Man)3(GlcNAc)2 or other larger high mannose oligosaccharides, in the core of N-linked glycans. Members in this family are retaining glycosyl hydrolases of family GH38 that employs a two-step mechanism involving the formation of a covalent glycosyl enzyme complex. Two carboxylic acids positioned within the active site act in concert: one as a catalytic nucleophile and the other as a general acid/base catalyst. Length = 258

>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38)

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 2   LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNS 50
           L++QW+K A L +T  LL+P G DF      + D   +N   L    NS
Sbjct: 206 LVEQWKKLAELGATNHLLMPSGGDFTI---PQADPLQVNQARLVEPWNS 251

Alpha-mannosidases (EC 3.2.1.24) are extensively found in eukaryotes and play important roles in the processing of newly formed N-glycans and in degradation of mature glycoproteins. A deficiency of this enzyme causes the lysosomal storage disease alpha-mannosidosis. Many bacterial and archaeal species also possess putative alpha-mannosidases, but their activity and specificity is largely unknown. Based on different functional characteristics and sequence homology, alpha-mannosidases have been organized into two classes (class I, belonging to glycoside hydrolase family 47, and class II, belonging to glycoside hydrolase family 38). Members of this family corresponds to class II alpha-mannosidases (alphaMII), which contain intermediate Golgi alpha-mannosidases II, acidic lysosomal alpha-mannosidases, animal sperm and epididymal alpha -mannosidases, neutral ER/cytosolic alpha-mannosidases, and some putative prokaryotic alpha-mannosidases. AlphaMII possess a-1,3, a-1,6, and a-1,2 hydrolytic activity, and catalyzes the degradation of N-linked oligosaccharides. The N-terminal catalytic domain of alphaMII adopts a structure consisting of parallel 7-stranded beta/alpha barrel. Members in this family are retaining glycosyl hydrolases of family GH38 that employs a two-step mechanism involving the formation of a covalent glycosyl enzyme complex. Two carboxylic acids positioned within the active site act in concert: one as a catalytic nucleophile and the other as a general acid/base catalyst. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
KOG1959|consensus	996		100.0
KOG1958|consensus	1129		100.0
PLN02701	1050	alpha-mannosidase	100.0
PF07748	457	Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t	99.17
PF01074	275	Glyco_hydro_38: Glycosyl hydrolases family 38 N-te	99.16
PRK09819	875	alpha-mannosidase; Provisional	99.07
PF09261	80	Alpha-mann_mid: Alpha mannosidase, middle domain;	98.4
smart00872	79	Alpha-mann_mid Alpha mannosidase, middle domain. M	97.93

>KOG1959|consensus

Probab=100.00  E-value=6.3e-63  Score=491.22  Aligned_cols=115  Identities=34%  Similarity=0.702  Sum_probs=109.3

Q ss_pred             hhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcC--CCceEEEeecChhHHHHHHHhhccCCCC
Q psy11165          2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQ--PSYNVHASFGTLADYFDTLKKAKDERSF   79 (244)
Q Consensus         2 ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~--~~~~v~i~YST~s~Yf~al~~~~~~~~~   79 (244)
                      +++.-+.++.+|+|||||+||||||+|++|..|   |+||||||+|||.+  .+.++++.||||+||++|+|+.+.  +|
T Consensus       269 Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~---fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~--Tw  343 (996)
T KOG1959|consen  269 FVAYAKNQAAYYRTNHIMWPMGDDFQYENANVW---FKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQ--TW  343 (996)
T ss_pred             HHHHHHHhHhheecceEEEeccCCceehhhhHH---HhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcC--cc
Confidence            567788999999999999999999999999999   99999999999966  346899999999999999999976  89


Q ss_pred             CccccceeecCCCCCCceeeeeecCccceeeeeecchHHHhh
Q psy11165         80 PSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAA  121 (244)
Q Consensus        80 p~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~Lrsa  121 (244)
                      |++++||||||+++++||||||||||++|+++|+++..|++|
T Consensus       344 p~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~a  385 (996)
T KOG1959|consen  344 PVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVA  385 (996)
T ss_pred             cccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHH
Confidence            999999999999999999999999999999999999999988

>KOG1958|consensus

Probab=100.00  E-value=1.8e-55  Score=439.66  Aligned_cols=121  Identities=66%  Similarity=1.201  Sum_probs=115.9

Q ss_pred             ChhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhcc-----
Q psy11165          1 MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKD-----   75 (244)
Q Consensus         1 ~ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~-----   75 (244)
                      ||||||||+|++|+||+||+|+||||+|....||++||.|+.+|++|||+++.++++++|+|+++||+||+++..     
T Consensus       399 ~LldQyrKkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~e~~kg  478 (1129)
T KOG1958|consen  399 LLLDQYRKKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYSERGKG  478 (1129)
T ss_pred             HHHHHHHHHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhccccCC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999822     


Q ss_pred             CCCCCccccceeecCCCCCCceeeeeecCccceeeeeecchHHHhh
Q psy11165         76 ERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAA  121 (244)
Q Consensus        76 ~~~~p~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~Lrsa  121 (244)
                      +..||+.+||||+|||..++||||||||||++|++.|.+++.||+|
T Consensus       479 ~~~FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~A  524 (1129)
T KOG1958|consen  479 QEPFPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSA  524 (1129)
T ss_pred             CCCCcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhH
Confidence            3368999999999999999999999999999999999999999987

>PLN02701 alpha-mannosidase

Probab=100.00  E-value=2.8e-54  Score=447.11  Aligned_cols=126  Identities=61%  Similarity=1.058  Sum_probs=112.2

Q ss_pred             hhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhcc------
Q psy11165          2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKD------   75 (244)
Q Consensus         2 ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~------   75 (244)
                      |++++++++.+|+||+||+|+||||+|....+|..+|+|||+||+|||++++.+++++||||++||++++++..      
T Consensus       278 ~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~  357 (1050)
T PLN02701        278 LLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSR  357 (1050)
T ss_pred             HHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHHHhhCcccCceEEECCHHHHHHHHHhhhccccccc
Confidence            68999999999999999999999999977777777799999999999999777799999999999999998641      


Q ss_pred             --------CCCCCccccceeecCCCCCCceeeeeecCccceeeeeecchHHHhhhhhhhh
Q psy11165         76 --------ERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTL  127 (244)
Q Consensus        76 --------~~~~p~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~Lrsae~LySl  127 (244)
                              ...||+++||||||++..++||||||||||.+|++.|++++.|+++|+|+++
T Consensus       358 ~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L~sl  417 (1050)
T PLN02701        358 PGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEILFSF  417 (1050)
T ss_pred             cccccccccCCCceecccccccccccccccceeeecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    1379999999999999999999999999999999999888876666665554

>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3

Probab=99.17  E-value=1.3e-11  Score=116.30  Aligned_cols=92  Identities=30%  Similarity=0.506  Sum_probs=77.3

Q ss_pred             eeeeeecchHHHhhhhhhhhhccCcchhhhhhccccCccccccCCCceEEEeecCceeEEeecccccccccC-CceEEEe
Q psy11165        108 KRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLK-PGQIEVT  186 (244)
Q Consensus       108 K~~iR~lss~Lrsae~LySld~nG~em~kR~~~~~~~i~gNyYPv~~~~~i~d~~~~ltv~~~~~~g~~s~~-~g~~e~~  186 (244)
                      |.+.-++...+.+...+|. +.+|+.+++|.+....+.++|||||+..+||.|...+|+|++|+++|++++. +|+||||
T Consensus       216 ~~l~~~f~t~i~~~~~~~~-~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~~~~~g~l~lt  294 (457)
T PF07748_consen  216 KELRVRFPTNIDSDEAFYD-DQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYESLDQDGELELT  294 (457)
T ss_dssp             EEEEEEEEES-S-TCEEEE-ESTTEEEEECESSTTTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEECTTTTEEEEE
T ss_pred             eeEEEEeecCCCCCCEEEE-CCCCeEEecCCccccCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEeccCCCeEEEE
Confidence            4566778888888777776 7888887776777779999999999999999999878999999999999998 9999998


Q ss_pred             ccccccccccCccceeeeecccccCCcccC
Q psy11165        187 MPCDARVVGLNLGEVIQDRRLNQDDERGLG  216 (244)
Q Consensus       187 ~~~~~~~~~~~~~~~~l~rr~~~dd~~g~~  216 (244)
                                      ||||...||++|++
T Consensus       295 ----------------L~R~~~~D~g~~~~  308 (457)
T PF07748_consen  295 ----------------LLRRPSQDDGRGVF  308 (457)
T ss_dssp             ----------------EEEEBSCG-SSSEE
T ss_pred             ----------------EeecccccCCccEE
Confidence                            89999999999988

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....

>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3

Probab=99.16  E-value=2.9e-11  Score=108.32  Aligned_cols=77  Identities=36%  Similarity=0.551  Sum_probs=61.3

Q ss_pred             hhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCC--CceEEEeecChhHHHHHHHhhccCCCC
Q psy11165          2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQP--SYNVHASFGTLADYFDTLKKAKDERSF   79 (244)
Q Consensus         2 ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~--~~~v~i~YST~s~Yf~al~~~~~~~~~   79 (244)
                      |++++++.++.+.++++|+++|+|      +   .++.+.+.++++||...  ...++++|||+++||++++++   .+|
T Consensus       196 ~~~~~~~~~~~~~~~~~l~~~G~d------~---~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~---~~~  263 (275)
T PF01074_consen  196 LLEQLRKLAKKYYTNNILIPYGDD------D---DGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE---SEL  263 (275)
T ss_dssp             HHHHHHHHHCCSSSSEEEEEEEEE------H---HHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC-----B
T ss_pred             HHHHHHHHHHhcCCCceEEEeecC------C---CCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc---cCC
Confidence            678999999999999999999999      2   56899999999999332  357999999999999999998   489


Q ss_pred             Ccc-ccceeecC
Q psy11165         80 PSL-SGDFFTYA   90 (244)
Q Consensus        80 p~~-~gDFFPYa   90 (244)
                      |+. .+||||||
T Consensus       264 p~~~~~df~~Y~  275 (275)
T PF01074_consen  264 PVHYHGDFPPYA  275 (275)
T ss_dssp             -EE-ES-B-S-E
T ss_pred             CcccCCCCCCCC
Confidence            998 99999996

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....

>PRK09819 alpha-mannosidase; Provisional

Probab=99.07  E-value=1.6e-10  Score=119.61  Aligned_cols=109  Identities=19%  Similarity=0.267  Sum_probs=83.6

Q ss_pred             HHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhccCCCCCccccce
Q psy11165          7 RKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDF   86 (244)
Q Consensus         7 r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~~~~~p~~~gDF   86 (244)
                      ........++++|+|+|+|+.+..        +||.++|+.+|.... ..+++|||+.+||++++++..  .+|+..|||
T Consensus       203 ~~~~~~~~~~~~l~~~G~d~~p~~--------~~~~e~i~~~~~~~~-~~~~~~st~~~yf~~l~~~~~--~lp~~~GEl  271 (875)
T PRK09819        203 GVLEKKSSTKNILLPNGHDQMPLQ--------KNLFEVMDKLNEIYP-EREFVISRFENVFEKLEKQRD--NLPTLKGEF  271 (875)
T ss_pred             HHHhhcCCCCcEEEecCCCCCccc--------ccHHHHHHHHHhhCC-CCcEEECCHHHHHHHHHhhcC--CCCeeeeec
Confidence            334445679999999999986543        234566666665532 357889999999999988753  799999999


Q ss_pred             eecCCCCCCce-eeeeecCccceeeeeecchHHHh-hhhhhhhhc
Q psy11165         87 FTYADKDDNYW-SGYYTSRPFYKRMDRELSGILRA-ADILFTLAW  129 (244)
Q Consensus        87 FPYad~~~~yW-TGYyTSRP~lK~~iR~lss~Lrs-ae~LySld~  129 (244)
                      ++   .....| +|+||||+.+|++.|+++..|+. +|.|.+++.
T Consensus       272 ~~---~~y~~~HrG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~  313 (875)
T PRK09819        272 ID---GKYMRVHRSIFSTRMDIKIANARIENKIVNVLEPLASIAY  313 (875)
T ss_pred             CC---CccccccCCccccHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence            93   112234 89999999999999999999975 888888754

>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold

Probab=98.40  E-value=2.3e-08  Score=75.00  Aligned_cols=36  Identities=50%  Similarity=0.851  Sum_probs=32.5

Q ss_pred             CceeeeeecCccceeeeeecchHHHhhhhhhhhhcc
Q psy11165         95 NYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWR  130 (244)
Q Consensus        95 ~yWTGYyTSRP~lK~~iR~lss~Lrsae~LySld~n  130 (244)
                      +||||||||||.+|++.|++++.|+++|.|++++..
T Consensus         1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~   36 (80)
T PF09261_consen    1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAAL   36 (80)
T ss_dssp             EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHH
T ss_pred             CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            489999999999999999999999999999998543

The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....

>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain

Probab=97.93  E-value=1.4e-06  Score=65.18  Aligned_cols=34  Identities=53%  Similarity=0.837  Sum_probs=32.2

Q ss_pred             ceeeeeecCccceeeeeecchHHHhhhhhhhhhc
Q psy11165         96 YWSGYYTSRPFYKRMDRELSGILRAADILFTLAW  129 (244)
Q Consensus        96 yWTGYyTSRP~lK~~iR~lss~Lrsae~LySld~  129 (244)
                      ||+|+|||||.+|++.|+++..|+.++.+.+++.
T Consensus         1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~   34 (79)
T smart00872        1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAA   34 (79)
T ss_pred             CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999753

Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	244
3cv5_A	1045	Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu		3e-45
3cv5_A	1045	Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu		4e-23
1hxk_A	1015	Golgi Alpha-Mannosidase Ii In Complex With Deoxyman		3e-45
1hxk_A	1015	Golgi Alpha-Mannosidase Ii In Complex With Deoxyman		4e-23
3dx3_A	1045	Golgi Alpha-Mannosidase Ii In Complex With Mannosta		3e-45
3dx3_A	1045	Golgi Alpha-Mannosidase Ii In Complex With Mannosta		4e-23
1qwn_A	1045	Golgi Alpha-Mannosidase Ii Covalent Intermediate Co		3e-45
1qwn_A	1045	Golgi Alpha-Mannosidase Ii Covalent Intermediate Co		4e-23
1ps3_A	1045	Golgi Alpha-mannosidase Ii In Complex With Kifunens		3e-45
1ps3_A	1045	Golgi Alpha-mannosidase Ii In Complex With Kifunens		4e-23
1qwu_A	1045	Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit		7e-45
1qwu_A	1045	Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit		4e-23
1hty_A	1015	Golgi Alpha-Mannosidase Ii Length = 1015		2e-44
1hty_A	1015	Golgi Alpha-Mannosidase Ii Length = 1015		5e-23
1o7d_D	282	The Structure Of The Bovine Lysosomal A-Mannosidase		4e-04
1o7d_B	84	The Structure Of The Bovine Lysosomal A-Mannosidase		4e-04

>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045

Iteration: 1
 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 794 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 852
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 853 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 896
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 897 E-KVNNCVRP 905

>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015

Iteration: 1
 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 287 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 346
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 347 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 406
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 407 RAAEMLS--AWHSWDGMAR 423

>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 764 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 822
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 823 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 866
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 867 E-KVNNCVRP 875

>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045

Iteration: 1
 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 794 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 852
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 853 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 896
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 897 E-KVNNCVRP 905

>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045

Iteration: 1
 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 794 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 852
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 853 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 896
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 897 E-KVNNCVRP 905

>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045

Iteration: 1
 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 794 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 852
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 853 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 896
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 897 E-KVNNCVRP 905

>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045

Iteration: 1
 Score =  176 bits (447), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 81/139 (58%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGD+FR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDNFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA++L   AW   D + R
Sbjct: 437 RAAEMLS--AWHSWDGMAR 453

>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 794 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPL 852
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++                E++QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 853 GGSSLASGEL----------------EIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 896
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 897 E-KVNNCVRP 905

>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015

Iteration: 1
 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/139 (58%), Positives = 104/139 (74%), Gaps = 4/139 (2%)
Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 287 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 346
Query: 61  GTLADYFDTLKKAK--DERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+   +  FP+LSGDFFTYAD+ DNYWSGYYTSRP++KR DR L   +
Sbjct: 347 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRXDRVLXHYV 406
Query: 119 RAADILFTLAWRGSDMIKR 137
           RAA+ L   AW   D + R
Sbjct: 407 RAAEXL--SAWHSWDGMAR 423

>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 18/130 (13%)
Query: 114 LSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSL 173
           L   + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q L
Sbjct: 764 LETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGXFIEDANTRLTLLTGQPL 822
Query: 174 GVACLKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVL 233
           G + L  G++E+                 QDRRL  DDERGLGQGV+DN P L ++R+VL
Sbjct: 823 GGSSLASGELEIX----------------QDRRLASDDERGLGQGVLDNKPVLHIYRLVL 866
Query: 234 ETRQTDCKVP 243
           E +  +C  P
Sbjct: 867 E-KVNNCVRP 875

>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 16/74 (21%)
Query: 144 PLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVTMPCDARVVGLNLGEVIQ 203
           P+ GN+YP+ S  +I D   +L++L+ +S G + L+ G +E+ +                
Sbjct: 168 PVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMV---------------- 211
Query: 204 DRRLNQDDERGLGQ 217
            RRL +DD RG+G+
Sbjct: 212 HRRLLKDDARGVGE 225

>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 56  VHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELS 115
           V+  + T A Y   L KA    S+     DFF YAD    +W+GY++SRP  KR +R   
Sbjct: 3   VNVLYSTPACYLWELNKA--NLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSY 60
Query: 116 GILRAADILFTLA 128
             L+  + L  LA
Sbjct: 61  NFLQVCNQLEALA 73

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	244
3bvx_A	1045	Alpha-mannosidase 2; family 38 glycoysl hydrolase,	5e-36
3bvx_A	1045	Alpha-mannosidase 2; family 38 glycoysl hydrolase,	1e-25
1o7d_B	84	Lysosomal alpha-mannosidase; hydrolase, glycosyl h	3e-30
1o7d_D	282	Lysosomal alpha-mannosidase; hydrolase, glycosyl h	9e-23
2wyh_A	923	Alpha-mannosidase; hydrolase, glycosidase, glycosi	3e-12
1o7d_A	298	Lysosomal alpha-mannosidase; hydrolase, glycosyl h	9e-12
3lvt_A	899	Glycosyl hydrolase, family 38; PSI, MCSG, structur	5e-11

>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045

 Score =  134 bits (337), Expect = 5e-36
 Identities = 78/132 (59%), Positives = 100/132 (75%), Gaps = 2/132 (1%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 317 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 376

Query: 61  GTLADYFDTLKKAKDER--SFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGIL 118
           GTL +YFD + +A+      FP+LSGDFFTYAD+ DNYWSGYYTSRP++KRMDR L   +
Sbjct: 377 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYV 436

Query: 119 RAADILFTLAWR 130
           RAA++L      
Sbjct: 437 RAAEMLSAWHSW 448

>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045

 Score =  103 bits (258), Expect = 1e-25
 Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 17/121 (14%)

Query: 118 LRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVAC 177
           + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q LG + 
Sbjct: 798 IDSGDIFYTDLN-GLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSS 856

Query: 178 LKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQ 237
           L  G++E+                  DRRL  DDERGLGQGV+DN P L ++R+VLE   
Sbjct: 857 LASGELEIMQ----------------DRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVN 900

Query: 238 T 238
            
Sbjct: 901 N 901

>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84

 Score =  107 bits (268), Expect = 3e-30
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 55  NVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDREL 114
            V+  + T A Y   L KA    S+     DFF YAD    +W+GY++SRP  KR +R  
Sbjct: 2   RVNVLYSTPACYLWELNKANL--SWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLS 59

Query: 115 SGILRAADILFTLAWRGSD 133
              L+  + L  LA   ++
Sbjct: 60  YNFLQVCNQLEALAGPAAN 78

>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282

 Score = 92.8 bits (230), Expect = 9e-23
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 27/119 (22%)

Query: 131 GSDMIKR--------KYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQ 182
           G ++++R        K  +  P+ GN+YP+ S  +I D   +L++L+ +S G + L+ G 
Sbjct: 147 GREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGS 206

Query: 183 IEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLT---LFRIVLETRQT 238
           +                E++  RRL +DD RG+G+ +      L       ++L+ ++T
Sbjct: 207 L----------------ELMVHRRLLKDDARGVGEPLNKEGSGLWVRGRHLVLLDKKET 249

>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923

 Score = 65.3 bits (158), Expect = 3e-12
 Identities = 19/141 (13%), Positives = 43/141 (30%), Gaps = 11/141 (7%)

Query: 4   DQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTL 63
            +        ST+ LL+  G D +  +         +     A  N     +        
Sbjct: 233 KKLADAERFASTKHLLMMNGCDHQPVQL--------DVTKAIALANQLYP-DYEFVHSCF 283

Query: 64  ADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELS-GILRAAD 122
            DY   L     E    ++ G+  +         +   ++R + K+ +  +S  +    +
Sbjct: 284 EDYLADLADDLPEN-LSTVQGEITSQETDGWYTLANTASARIYLKQANTRVSRQLENITE 342

Query: 123 ILFTLAWRGSDMIKRKYLKKI 143
            L  +A+  +       L+  
Sbjct: 343 PLAAMAYEVTSTYPHDQLRYA 363

>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298

 Score = 62.7 bits (152), Expect = 9e-12
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYN 55
             L     +  LY T+  ++ +G DF+YE +  W     N + L   +N+Q   N
Sbjct: 246 YFLKLATDQGKLYRTKHTVMTMGSDFQYENANTW---FKNLDKLIQLVNAQQRAN 297

>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899

 Score = 61.4 bits (148), Expect = 5e-11
 Identities = 16/143 (11%), Positives = 40/143 (27%), Gaps = 11/143 (7%)

Query: 2   LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFG 61
              +        ST  LL+  G D +  +         +     A  N            
Sbjct: 211 WKQKLADVERYASTNHLLMMNGVDHQPVQR--------DITKAIALANELFP-EYEFIHS 261

Query: 62  TLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAA 121
              DY   +++   E    +++G+  +         +   ++R + K+ + ++   L   
Sbjct: 262 NFDDYLKAVQEELPED-LGTVTGELTSQETDGWYTLANTSSARVYLKQWNTKVQRQLENI 320

Query: 122 DILF-TLAWRGSDMIKRKYLKKI 143
                 +A+  +           
Sbjct: 321 AEPLAAMAYEVTGDYPHDQFDYA 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
3bvx_A	1045	Alpha-mannosidase 2; family 38 glycoysl hydrolase,	100.0
1o7d_D	282	Lysosomal alpha-mannosidase; hydrolase, glycosyl h	100.0
1o7d_B	84	Lysosomal alpha-mannosidase; hydrolase, glycosyl h	99.95
2wyh_A	923	Alpha-mannosidase; hydrolase, glycosidase, glycosi	99.65
3lvt_A	899	Glycosyl hydrolase, family 38; PSI, MCSG, structur	99.54
2wyh_A	923	Alpha-mannosidase; hydrolase, glycosidase, glycosi	98.5
3lvt_A	899	Glycosyl hydrolase, family 38; PSI, MCSG, structur	95.27

>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...

Probab=100.00  E-value=3.4e-45  Score=378.80  Aligned_cols=124  Identities=63%  Similarity=1.164  Sum_probs=113.6

Q ss_pred             hhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhcc--CCCC
Q psy11165          2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKD--ERSF   79 (244)
Q Consensus         2 ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~--~~~~   79 (244)
                      +++++++++++|++|+||+|+|+||+|.++.+|..+|+||++||++||++++..++++||||+|||++++++..  ...|
T Consensus       318 ~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~l  397 (1045)
T 3bvx_A          318 LVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEF  397 (1045)
T ss_dssp             HHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCC
T ss_pred             HHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHHHHHHHHHhhcccccccC
Confidence            57889999999999999999999999999999999999999999999998766789999999999999998653  1369


Q ss_pred             CccccceeecCCCCCCceeeeeecCccceeeeeecchHHHhhhhhh
Q psy11165         80 PSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILF  125 (244)
Q Consensus        80 p~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~Lrsae~Ly  125 (244)
                      |+.+||||||++.+++||||||||||.+|++.|++++.|+++|.|.
T Consensus       398 p~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~  443 (1045)
T 3bvx_A          398 PTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLS  443 (1045)
T ss_dssp             CEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999888776554

>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6

Probab=100.00  E-value=1.9e-35  Score=268.24  Aligned_cols=116  Identities=26%  Similarity=0.482  Sum_probs=110.1

Q ss_pred             ceeeeeecchHHHhhhhhhhhhccCcchhhhhhcc--------ccCccccccCCCceEEEeecCceeEEeeccccccccc
Q psy11165        107 YKRMDRELSGILRAADILFTLAWRGSDMIKRKYLK--------KIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACL  178 (244)
Q Consensus       107 lK~~iR~lss~Lrsae~LySld~nG~em~kR~~~~--------~~~i~gNyYPv~~~~~i~d~~~~ltv~~~~~~g~~s~  178 (244)
                      -|+++.++++.+.+.+.||+ |+||++|+||+++.        ++|++||||||+++|||+|++.||+||+||||||||+
T Consensus       124 ~kEiv~r~~T~i~s~~~FYT-DsNG~e~~kR~~~~r~~~~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl  202 (282)
T 1o7d_D          124 GKEVISRFDTALATRGLFYT-DSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSL  202 (282)
T ss_dssp             CEEEEEEEECCCCCTTEEEE-ESTTSSEEEEETTCCSSSCCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCS
T ss_pred             CcEEEEEEEeeeccCCeEEE-CCCCceeeEEEeccccccccccccCcccceeeeeeEEEEEcCCeEEEEEeccccccccc
Confidence            49999999999999999998 99999999999986        6999999999999999999999999999999999999


Q ss_pred             CCceEEEeccccccccccCccceeeeecccccCCcccCCCccCC---CcceeEEEEEEeecccc
Q psy11165        179 KPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDN---IPTLTLFRIVLETRQTD  239 (244)
Q Consensus       179 ~~g~~e~~~~~~~~~~~~~~~~~~l~rr~~~dd~~g~~~~~~d~---~~~~~~~~~~~~~~~~~  239 (244)
                      ++||||||                |||||++||+|||||+|+|+   .+++.+|||+|++...+
T Consensus       203 ~~G~lElM----------------lhRRl~~DD~rGvge~l~d~~~gl~v~g~~~l~l~~~~~~  250 (282)
T 1o7d_D          203 RDGSLELM----------------VHRRLLKDDARGVGEPLNKEGSGLWVRGRHLVLLDKKETA  250 (282)
T ss_dssp             STTEEEEE----------------EEEECSSCCSSSCCSCSCCCGGGGSEEEEEEEEEEEHHHH
T ss_pred             CCCeEEEE----------------EeeeccccccccccccccccCCCeEEEEEEEEEEeCcccc
Confidence            99999998                89999999999999999998   68999999999986544

>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1

Probab=99.95  E-value=2.6e-29  Score=190.99  Aligned_cols=73  Identities=37%  Similarity=0.562  Sum_probs=69.4

Q ss_pred             eEEEeecChhHHHHHHHhhccCCCCCccccceeecCCCCCCceeeeeecCccceeeeeecchHHHhhhhhhhhhc
Q psy11165         55 NVHASFGTLADYFDTLKKAKDERSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAW  129 (244)
Q Consensus        55 ~v~i~YST~s~Yf~al~~~~~~~~~p~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~Lrsae~LySld~  129 (244)
                      +|+|+||||+|||+||++...  .||++++|||||+|++++||||||||||.+|+++|++++.||+|++|++++.
T Consensus         2 ~v~v~ysT~s~Yf~al~~~~~--~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~   74 (84)
T 1o7d_B            2 RVNVLYSTPACYLWELNKANL--SWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAG   74 (84)
T ss_dssp             CEEEEECCHHHHHHHHHHTCC--CBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             eEEEEeCCHHHHHHHHHHhCC--CCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            689999999999999999854  7999999999999999999999999999999999999999999999999753

>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*

Probab=99.65  E-value=4.9e-17  Score=166.50  Aligned_cols=112  Identities=19%  Similarity=0.289  Sum_probs=93.0

Q ss_pred             hHHHHHH-hhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhc-CCCceEEEeecChhHHHHHHHhhccCCCCC
Q psy11165          3 LDQWRKK-ATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNS-QPSYNVHASFGTLADYFDTLKKAKDERSFP   80 (244)
Q Consensus         3 l~q~r~~-s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~-~~~~~v~i~YST~s~Yf~al~~~~~~~~~p   80 (244)
                      ++++.++ .+.+.+++||+|+|+||.+.        +.||+++|+++|+ .+  +++++||||++||++++++.. ..||
T Consensus       231 ~~~~~~~~~~~~~t~~~l~~~G~D~~~~--------~~~~~~~i~~~n~~~~--~~~~~~sT~~~yf~~l~~~~~-~~lp  299 (923)
T 2wyh_A          231 WDKKLADAERFASTKHLLMMNGCDHQPV--------QLDVTKAIALANQLYP--DYEFVHSCFEDYLADLADDLP-ENLS  299 (923)
T ss_dssp             HHHHHHHHHHHCSSSEEEEEECCBTCCC--------CTTHHHHHHHHHHHCT--TEEEEECCHHHHHHHHHHHSC-SCCC
T ss_pred             HHHHHHHHHhcCCCCeEEEEeecCCCCc--------chhHHHHHHHHHhhCC--CceEEECCHHHHHHHHHhhcc-ccCc
Confidence            3444443 56699999999999999873        4678999999998 34  478999999999999987642 2699


Q ss_pred             cccccee-ecCCCCCCce-e--eeeecCccceeeeeecchHH-Hhhhhhhhhhc
Q psy11165         81 SLSGDFF-TYADKDDNYW-S--GYYTSRPFYKRMDRELSGIL-RAADILFTLAW  129 (244)
Q Consensus        81 ~~~gDFF-PYad~~~~yW-T--GYyTSRP~lK~~iR~lss~L-rsae~LySld~  129 (244)
                      +.+|||| ||.    .+| |  |||||||.+|++.|++++.| +.+|.|.+++.
T Consensus       300 ~~~GEl~~~~~----~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~  349 (923)
T 2wyh_A          300 TVQGEITSQET----DGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAY  349 (923)
T ss_dssp             EEESCBSCTTS----CSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             eecccccCccc----ccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999997 553    336 6  99999999999999999999 79999998763

>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}

Probab=99.54  E-value=2.2e-15  Score=154.22  Aligned_cols=111  Identities=17%  Similarity=0.194  Sum_probs=82.6

Q ss_pred             HHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhccCCCCCccccce
Q psy11165          7 RKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFPSLSGDF   86 (244)
Q Consensus         7 r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~~~~~p~~~gDF   86 (244)
                      .+..+.+.|++||+|+|+||.     .+   +.||+++|+++|+.. ..+++.||||++||++++++.. ..||+.+|||
T Consensus       216 ~~~~~~~~t~~il~~~G~D~~-----p~---~~~l~~~i~~~n~~~-p~~~~~~st~~~yf~~l~~~~~-~~lp~~~GEl  285 (899)
T 3lvt_A          216 ADVERYASTNHLLMMNGVDHQ-----PV---QRDITKAIALANELF-PEYEFIHSNFDDYLKAVQEELP-EDLGTVTGEL  285 (899)
T ss_dssp             HHHHHHCSSSEEEEEEEEC--------------CHHHHHHHHHHHC-SSEEEEECCHHHHHHHHHHTCC---CCEEECCC
T ss_pred             HHHHhhcCCCeEEEeecCCCC-----ch---HHHHHHHHHHHHhcC-CCceEEEcCHHHHHHHHHHhcc-ccCCcccccc
Confidence            345667899999999999962     33   789999999999742 3689999999999999998752 3699999999


Q ss_pred             e-ecCCCCCCcee-eeeecCccceeeeeecchHHH-hhhhhhhhhc
Q psy11165         87 F-TYADKDDNYWS-GYYTSRPFYKRMDRELSGILR-AADILFTLAW  129 (244)
Q Consensus        87 F-PYad~~~~yWT-GYyTSRP~lK~~iR~lss~Lr-sae~LySld~  129 (244)
                      | +|.++  .||| |||||||.+|++.|++++.|+ .||.|.+++.
T Consensus       286 ~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~  329 (899)
T 3lvt_A          286 TSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAY  329 (899)
T ss_dssp             -------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred             cccccCc--eEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8 55433  4776 888999999999999999999 6999999864

>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*

Probab=98.50  E-value=1.1e-07  Score=97.52  Aligned_cols=95  Identities=14%  Similarity=-0.011  Sum_probs=76.1

Q ss_pred             cceeeeeecchHHHhhhhhhhhhccCcchhhhhhccc---cCccccccCCCceEEEeecCceeEEeecccccccccC-Cc
Q psy11165        106 FYKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKK---IPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLK-PG  181 (244)
Q Consensus       106 ~lK~~iR~lss~Lrsae~LySld~nG~em~kR~~~~~---~~i~gNyYPv~~~~~i~d~~~~ltv~~~~~~g~~s~~-~g  181 (244)
                      .-|++.-++...+++.+.++   .+|+++++|.....   -..++||||+.++|.|.|...+++|++|+++|++++. +|
T Consensus       694 ~~~~l~v~fpt~i~s~~~~~---d~~fg~i~R~~~~~~~~w~~a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~  770 (923)
T 2wyh_A          694 TNHRLRVLFPTHLKTDHHLA---DSIFETVKRPNHPDATFWKNPSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTN  770 (923)
T ss_dssp             CSEEEEEEEECCCCCSEEEE---EETTEEEEEESSCCTTTCCCSCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTT
T ss_pred             CCEEEEEEeccccCCCCEEE---ecCceEEEccCCCCCCCcccccceEeeeeEEEEECCCCcEEEEeCCccceEEecCCC
Confidence            34666666677777666444   39999999987643   2469999999999999999999999999999999994 89


Q ss_pred             eEEEeccccccccccCccceeeeecc--cccCCcccCCCccCC
Q psy11165        182 QIEVTMPCDARVVGLNLGEVIQDRRL--NQDDERGLGQGVMDN  222 (244)
Q Consensus       182 ~~e~~~~~~~~~~~~~~~~~~l~rr~--~~dd~~g~~~~~~d~  222 (244)
                      +||||                |+|+.  +.|  ||+ ++..|.
T Consensus       771 ~i~Lt----------------LlRs~~~lg~--~G~-~p~p~a  794 (923)
T 2wyh_A          771 TIAIT----------------LLRSVGEMGD--WGY-FPTPEA  794 (923)
T ss_dssp             EEEEE----------------EEEECSBCCT--TSC-CBCGGG
T ss_pred             eEEEE----------------Eecccccccc--CCc-ccCchh
Confidence            99998                89998  555  787 666654

>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}

Probab=95.27  E-value=0.012  Score=60.39  Aligned_cols=57  Identities=14%  Similarity=0.098  Sum_probs=46.4

Q ss_pred             cCcchhhhhhcc--ccCccccccCCCceEEEeecCceeEEeecccccccccCCceEEEe
Q psy11165        130 RGSDMIKRKYLK--KIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVT  186 (244)
Q Consensus       130 nG~em~kR~~~~--~~~i~gNyYPv~~~~~i~d~~~~ltv~~~~~~g~~s~~~g~~e~~  186 (244)
                      ..++.++|....  .=..++|++|+.+++.|.|....++|++|...|.+++.+|+|+|+
T Consensus       691 ~~fG~i~Rpt~~~t~We~a~~e~~~~~~vdlsd~~~Gvavlnd~~~gy~v~~d~~i~LT  749 (899)
T 3lvt_A          691 SIYEVVTRPNQVSDTWENPTNPQHQQAFVNVHDQNKGVTIFNEGLNEYEVLADGTIAVT  749 (899)
T ss_dssp             CSSSEEEEEC-------CCCCCEECSSEEEEECSSCEEEEEESSCCEEEECTTCCEEEE
T ss_pred             ccceEEECCCCCCccccCCCcceeeeeEEEEecCCceEEEEeCCCcceeEcCCCEEEEE
Confidence            455567776432  223689999999999999999999999999999999988999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	244
d3bvua3	381	c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru	5e-30
d3bvua2	522	b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {	9e-27
g1o7d.3	330	c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno	5e-23
g1o7d.2	490	b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma	3e-16
d3bvua1	111	a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr	2e-12
g1o7d.1	95	a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann	2e-12
d1k1xa3	310	c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te	4e-06

>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: alpha-mannosidase
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  113 bits (283), Expect = 5e-30
 Identities = 56/94 (59%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 1   MLLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASF 60
           +L+DQW+KKA LY T VLL+PLGDDFR++++ EWD Q +NYE LF H+NSQ  +NV A F
Sbjct: 287 LLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQF 346

Query: 61  GTLADYFDTLKKAKDER--SFPSLSGDFFTYADK 92
           GTL +YFD + +A+      FP+LSGDFFTYAD+
Sbjct: 347 GTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADR 380

>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  105 bits (263), Expect = 9e-27
 Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 17/122 (13%)

Query: 118 LRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVAC 177
           + + DI +T    G   IKR+ L K+PLQ N+YP+PS  FIED   RL+LL+ Q LG + 
Sbjct: 276 IDSGDIFYTDLN-GLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSS 334

Query: 178 LKPGQIEVTMPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQ 237
           L  G++E+                  DRRL  DDERGLGQGV+DN P L ++R+VLE   
Sbjct: 335 LASGELEIMQ----------------DRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVN 378

Query: 238 TD 239
             
Sbjct: 379 NC 380

>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Families 57/38 glycoside transferase middle domain
family: alpha-mannosidase, domain 2
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 60.0 bits (145), Expect = 2e-12
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 94  DNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAWR 130
           DNYWSGYYTSRP++KRMDR L   +RAA++L      
Sbjct: 1   DNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSW 37

>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: 4-alpha-glucanotransferase, N-terminal domain
domain: 4-alpha-glucanotransferase, N-terminal domain
species: Archaeon Thermococcus litoralis [TaxId: 2265]

 Score = 44.7 bits (105), Expect = 4e-06
 Identities = 13/108 (12%), Positives = 25/108 (23%), Gaps = 12/108 (11%)

Query: 17  VLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDE 76
           V          +  + EW  +       F  + S    N      T ++Y       +  
Sbjct: 210 VFHDDGEKFGVWPGTYEWVYEKGWLREFFDAITSNEKIN----LMTYSEYLSKFT-PRGL 264

Query: 77  RSFPSLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGILRAADIL 124
              P  S         + + WS        +     +L    +     
Sbjct: 265 VYLPIASY-------FEMSEWSLPAKQAKLFVEFVEQLKEEGKFEKYR 305

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d3bvua2	522	Golgi alpha-mannosidase II {Fruit fly (Drosophila	99.96
d3bvua3	381	Golgi alpha-mannosidase II {Fruit fly (Drosophila	99.92
g1o7d.2	490	Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax	99.81
g1o7d.3	330	Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax	99.74
d3bvua1	111	Golgi alpha-mannosidase II {Fruit fly (Drosophila	98.99
g1o7d.1	95	Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax	98.96
d1k1xa3	310	4-alpha-glucanotransferase, N-terminal domain {Arc	97.13

>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=2.5e-30  Score=248.92  Aligned_cols=117  Identities=47%  Similarity=0.814  Sum_probs=111.8

Q ss_pred             ceeeeeecchHHHhhhhhhhhhccCcchhhhhhccccCccccccCCCceEEEeecCceeEEeecccccccccCCceEEEe
Q psy11165        107 YKRMDRELSGILRAADILFTLAWRGSDMIKRKYLKKIPLQGNFYPMPSAAFIEDTGRRLSLLSAQSLGVACLKPGQIEVT  186 (244)
Q Consensus       107 lK~~iR~lss~Lrsae~LySld~nG~em~kR~~~~~~~i~gNyYPv~~~~~i~d~~~~ltv~~~~~~g~~s~~~g~~e~~  186 (244)
                      =|+++.++.+.+.+.+.||+ |+||++|+||+.+.++|++||||||+++|||+|++.||+||+||+|||+|+++||||||
T Consensus       265 ~kEiv~r~~t~i~s~~~fyT-DsnG~~~~kR~~~~~~pv~~NyYPv~s~~~i~D~~~~lsll~dra~G~sSl~dG~lElm  343 (522)
T d3bvua2         265 NTEIVMRLETHIDSGDIFYT-DLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIM  343 (522)
T ss_dssp             TEEEEEEEEECCCCTTEEEE-EETTTEEEEEECCTTSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTEEEEE
T ss_pred             ceEEEEEeecccccCCEEEE-cCcccceeEeeccCCCcccccccceeeEEEEecCCeeEEEEecCCCCcccccCCEEEEE
Confidence            38999999999999999998 99999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccCccceeeeecccccCCcccCCCccCCCcceeEEEEEEeeccccc
Q psy11165        187 MPCDARVVGLNLGEVIQDRRLNQDDERGLGQGVMDNIPTLTLFRIVLETRQTDC  240 (244)
Q Consensus       187 ~~~~~~~~~~~~~~~~l~rr~~~dd~~g~~~~~~d~~~~~~~~~~~~~~~~~~~  240 (244)
                                      |||||++||.|||||+++|+.++..++++++|+.....
T Consensus       344 ----------------l~Rrl~~dD~rGvge~l~d~~~~~~~~~~~~~~~~~~~  381 (522)
T d3bvua2         344 ----------------QDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCV  381 (522)
T ss_dssp             ----------------EEEEBCSCCSSSCCSCBCCCCCEEEEEEEEEEECTTSB
T ss_pred             ----------------EEehhccCCccccccCccccccccceEEEEEecccccc
Confidence                            89999999999999999999999999999999875443

>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: alpha-mannosidase
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.92  E-value=7.2e-26  Score=210.53  Aligned_cols=91  Identities=62%  Similarity=1.173  Sum_probs=85.9

Q ss_pred             hhHHHHHHhhccCCCeEEEecCCCcCCCCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhcc--CCCC
Q psy11165          2 LLDQWRKKATLYSTRVLLVPLGDDFRYERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKD--ERSF   79 (244)
Q Consensus         2 ll~q~r~~s~~y~tn~il~~~G~DF~y~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~--~~~~   79 (244)
                      |++++++++++|+|||||+||||||+|.+|.+|+.||+||||||+|||++++++|+++||||++||+||+++..  ..+|
T Consensus       288 ~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~  367 (381)
T d3bvua3         288 LVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEF  367 (381)
T ss_dssp             HHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCC
T ss_pred             HHHHHHHHhhccCCCeEEEccccCCCCCccchHHHHHHhHHHHHHHHHhCCCCCeEEEECCHHHHHHHHHHHHhhcCCCC
Confidence            78999999999999999999999999999999999999999999999999888999999999999999998743  3479


Q ss_pred             CccccceeecCCC
Q psy11165         80 PSLSGDFFTYADK   92 (244)
Q Consensus        80 p~~~gDFFPYad~   92 (244)
                      |+++||||||||+
T Consensus       368 P~~~gDFfpYad~  380 (381)
T d3bvua3         368 PTLSGDFFTYADR  380 (381)
T ss_dssp             CEEESCBCSCBSS
T ss_pred             CCcCCCCcCCCCC
Confidence            9999999999996

>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Families 57/38 glycoside transferase middle domain
family: alpha-mannosidase, domain 2
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.99  E-value=1.5e-11  Score=95.04  Aligned_cols=36  Identities=61%  Similarity=1.004  Sum_probs=33.9

Q ss_pred             CCceeeeeecCccceeeeeecchHHHhhhhhhhhhc
Q psy11165         94 DNYWSGYYTSRPFYKRMDRELSGILRAADILFTLAW  129 (244)
Q Consensus        94 ~~yWTGYyTSRP~lK~~iR~lss~Lrsae~LySld~  129 (244)
                      ++||||||||||.+|++.|+++..|+++|.|.++..
T Consensus         1 ~~yWtG~yTSr~~lK~~~R~~e~~L~~~E~l~~~~~   36 (111)
T d3bvua1           1 DNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHS   36 (111)
T ss_dssp             TCBCCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             CCceeeehhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998754

>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: 4-alpha-glucanotransferase, N-terminal domain
domain: 4-alpha-glucanotransferase, N-terminal domain
species: Archaeon Thermococcus litoralis [TaxId: 2265]

Probab=97.13  E-value=1.9e-05  Score=68.49  Aligned_cols=103  Identities=14%  Similarity=0.233  Sum_probs=66.8

Q ss_pred             hHHHHHHhhccCCCeEEEec-CCCcCC-CCchhHHHHHHhHHHHHHHHhcCCCceEEEeecChhHHHHHHHhhccCCCCC
Q psy11165          3 LDQWRKKATLYSTRVLLVPL-GDDFRY-ERSEEWDAQMINYEALFAHLNSQPSYNVHASFGTLADYFDTLKKAKDERSFP   80 (244)
Q Consensus         3 l~q~r~~s~~y~tn~il~~~-G~DF~y-~~A~~w~~qF~n~DkLI~yIN~~~~~~v~i~YST~s~Yf~al~~~~~~~~~p   80 (244)
                      ++++++....-....+++++ |.+|-+ .++.+|......+++|++.|++++.    |+++||++|+++..... ....|
T Consensus       194 ~~~l~~~~~~~~~~~v~~~~D~E~fg~~~~~~~~~~~~~fl~~l~~~i~~~~~----i~~~Tpseyl~~~~p~~-~~~l~  268 (310)
T d1k1xa3         194 IEYLESLTSDDPSKVAVFHDDGEKFGVWPGTYEWVYEKGWLREFFDAITSNEK----INLMTYSEYLSKFTPRG-LVYLP  268 (310)
T ss_dssp             HHHHHTTCCSCTTCEEEEEEEGGGTTTSTTHHHHHTTTCHHHHHHHHHHHCTT----EEECCHHHHHHHCCCCC-BCCCC
T ss_pred             HHHHHHHHcCCCCceEEEecchhhcCccCcccccchHHHHHHHHHHHHhcCCC----eEEeCHHHHHHhCCCCC-ceeCC
Confidence            34455544444455555555 666664 4455563334568999999988753    67899999999764432 22334


Q ss_pred             ccccceeecCCCCCCceeeeeecCccceeeeeecchH
Q psy11165         81 SLSGDFFTYADKDDNYWSGYYTSRPFYKRMDRELSGI  117 (244)
Q Consensus        81 ~~~gDFFPYad~~~~yWTGYyTSRP~lK~~iR~lss~  117 (244)
                      +  +.++     +.+.|||++++++.+|+++|.++..
T Consensus       269 ~--~Sw~-----~~s~W~g~~~q~~~~~~~~r~~~~~  298 (310)
T d1k1xa3         269 I--ASYF-----EMSEWSLPAKQAKLFVEFVEQLKEE  298 (310)
T ss_dssp             S--BCCT-----THHHHTSCHHHHHHHHHHHHHHHTT
T ss_pred             C--CCcC-----cccceeCcHHHHHHHHHHHHHHHhc
Confidence            3  3332     2356999999999999988866554