Psyllid ID: psy11249


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-----
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
cHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccHHHHHHHHHHcccccccccccccEEEEccccEEEc
cHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccHHHHHHHHHHcccHHHccccccEEEEEccccEEcc
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRfanhwfpeapnrgqgyrcirlnknvkkdTILENAAKAVgmsyedmrlpveltlwvdphevccr
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANhwfpeapnrgqgyrCIRLNknvkkdtiLENAAkavgmsyeDMRLPVEltlwvdphevccr
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
******AAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCC*
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
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MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query105 2.2.26 [Sep-21-2011]
O70552 250 Protein BTG4 OS=Mus muscu yes N/A 0.990 0.416 0.409 3e-22
O88677 252 Protein BTG3 OS=Rattus no yes N/A 0.990 0.412 0.438 7e-22
P50615 252 Protein BTG3 OS=Mus muscu no N/A 0.990 0.412 0.438 7e-22
A4UTQ2 252 Protein BTG3 OS=Sus scrof yes N/A 0.990 0.412 0.438 3e-21
Q14201 252 Protein BTG3 OS=Homo sapi yes N/A 0.990 0.412 0.438 3e-21
Q63073171 Protein BTG1 OS=Rattus no no N/A 0.971 0.596 0.448 2e-20
P53348171 Protein BTG1 OS=Bos tauru no N/A 0.971 0.596 0.448 2e-20
P62325171 Protein BTG1 OS=Mus muscu no N/A 0.971 0.596 0.448 2e-20
P62324171 Protein BTG1 OS=Homo sapi no N/A 0.971 0.596 0.448 2e-20
Q9NY30 223 Protein BTG4 OS=Homo sapi no N/A 0.990 0.466 0.4 2e-20
>sp|O70552|BTG4_MOUSE Protein BTG4 OS=Mus musculus GN=Btg4 PE=2 SV=1 Back     alignment and function desciption
 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 70/105 (66%), Gaps = 1/105 (0%)

Query: 1   MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
           M+D+I+ AV F+ +L+++ +      Q+E F  KL  +L +++  HW P+ P++GQ +RC
Sbjct: 1   MRDEIATAVFFVTRLVKK-HEKLSTQQIETFALKLMTVLFEKYRGHWHPDCPSKGQAFRC 59

Query: 61  IRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR 105
           IR+N N  KD +LE A     +++  + LP E+T+WVDP+EVCCR
Sbjct: 60  IRINNNENKDPVLERACAESNVNFFHLGLPKEMTIWVDPYEVCCR 104




Shows marked antiproliferative activity, being able to induce G(1) arrest.
Mus musculus (taxid: 10090)
>sp|O88677|BTG3_RAT Protein BTG3 OS=Rattus norvegicus GN=Btg3 PE=2 SV=1 Back     alignment and function description
>sp|P50615|BTG3_MOUSE Protein BTG3 OS=Mus musculus GN=Btg3 PE=2 SV=1 Back     alignment and function description
>sp|A4UTQ2|BTG3_PIG Protein BTG3 OS=Sus scrofa GN=BTG3 PE=2 SV=1 Back     alignment and function description
>sp|Q14201|BTG3_HUMAN Protein BTG3 OS=Homo sapiens GN=BTG3 PE=2 SV=3 Back     alignment and function description
>sp|Q63073|BTG1_RAT Protein BTG1 OS=Rattus norvegicus GN=Btg1 PE=2 SV=1 Back     alignment and function description
>sp|P53348|BTG1_BOVIN Protein BTG1 OS=Bos taurus GN=BTG1 PE=2 SV=2 Back     alignment and function description
>sp|P62325|BTG1_MOUSE Protein BTG1 OS=Mus musculus GN=Btg1 PE=2 SV=1 Back     alignment and function description
>sp|P62324|BTG1_HUMAN Protein BTG1 OS=Homo sapiens GN=BTG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9NY30|BTG4_HUMAN Protein BTG4 OS=Homo sapiens GN=BTG4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query105
340708738 265 PREDICTED: hypothetical protein LOC10064 0.990 0.392 0.619 9e-33
383856571 264 PREDICTED: protein BTG3-like [Megachile 0.990 0.393 0.619 9e-33
66500913 266 PREDICTED: protein BTG3-like [Apis melli 0.990 0.390 0.619 9e-33
307166537 273 Protein BTG3 [Camponotus floridanus] 0.990 0.380 0.628 4e-32
332023723 268 Protein BTG3 [Acromyrmex echinatior] 0.990 0.388 0.619 2e-31
156544720 296 PREDICTED: maternal B9.10 protein-like [ 0.990 0.351 0.590 7e-31
307214680 264 Protein BTG3 [Harpegnathos saltator] 0.990 0.393 0.6 8e-31
322792421151 hypothetical protein SINV_13529 [Solenop 0.990 0.688 0.609 9e-31
91094023 222 PREDICTED: similar to Btg3 protein [Trib 0.990 0.468 0.542 5e-26
405961241 367 Protein BTG3 [Crassostrea gigas] 0.990 0.283 0.495 5e-26
>gi|340708738|ref|XP_003392979.1| PREDICTED: hypothetical protein LOC100647130 [Bombus terrestris] gi|350413130|ref|XP_003489888.1| PREDICTED: hypothetical protein LOC100748611 [Bombus impatiens] Back     alignment and taxonomy information
 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 1/105 (0%)

Query: 1   MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
           M+++I+AAVLFL +LIE+ N     DQLE FK +L ELL +RF NHWFP+ P +GQGYRC
Sbjct: 1   MRNEITAAVLFLVQLIEK-NEKFSPDQLECFKRRLVELLTERFKNHWFPDKPFKGQGYRC 59

Query: 61  IRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR 105
           IR+N + ++D  LE+AA A G+ YED+ LPVELTLWVDP+EVCCR
Sbjct: 60  IRVNGHNRRDATLESAANAAGVKYEDLSLPVELTLWVDPNEVCCR 104




Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856571|ref|XP_003703781.1| PREDICTED: protein BTG3-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|66500913|ref|XP_394152.2| PREDICTED: protein BTG3-like [Apis mellifera] gi|380022162|ref|XP_003694922.1| PREDICTED: protein BTG3-like [Apis florea] Back     alignment and taxonomy information
>gi|307166537|gb|EFN60604.1| Protein BTG3 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332023723|gb|EGI63947.1| Protein BTG3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|156544720|ref|XP_001605736.1| PREDICTED: maternal B9.10 protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307214680|gb|EFN89609.1| Protein BTG3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322792421|gb|EFZ16405.1| hypothetical protein SINV_13529 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|91094023|ref|XP_967468.1| PREDICTED: similar to Btg3 protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|405961241|gb|EKC27074.1| Protein BTG3 [Crassostrea gigas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query105
ZFIN|ZDB-GENE-031113-19160 btg3 "B-cell translocation gen 0.990 0.65 0.447 7.8e-23
UNIPROTKB|E1C802 225 BTG4 "Uncharacterized protein" 0.990 0.462 0.438 1.6e-22
MGI|MGI:1860140 250 Btg4 "B cell translocation gen 0.990 0.416 0.409 1.6e-22
RGD|1308809162 Btg4 "B-cell translocation gen 0.990 0.641 0.409 7e-22
RGD|2226 252 Btg3 "BTG family, member 3" [R 0.990 0.412 0.438 9e-22
UNIPROTKB|Q3T082 252 BTG3 "BTG family, member 3" [B 0.990 0.412 0.438 3e-21
UNIPROTKB|Q14201 252 BTG3 "Protein BTG3" [Homo sapi 0.990 0.412 0.438 3e-21
UNIPROTKB|A4UTQ2 252 BTG3 "Protein BTG3" [Sus scrof 0.990 0.412 0.438 3e-21
UNIPROTKB|E1BMC2 229 BTG4 "Uncharacterized protein" 0.990 0.454 0.409 3.9e-21
UNIPROTKB|E9PRM5160 BTG4 "Protein BTG4" [Homo sapi 0.990 0.65 0.4 1e-20
ZFIN|ZDB-GENE-031113-19 btg3 "B-cell translocation gene 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 47/105 (44%), Positives = 72/105 (68%)

Query:     1 MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
             M+ +I+A V FL +LI+++    DAD+++ F  +L   L +++  HW+P+ P++GQ +RC
Sbjct:     1 MKKEIAAVVFFLKRLIKKAE-KLDADKVDLFVERLTVALQEKYKGHWYPDNPSKGQAFRC 59

Query:    61 IRLNKNVKKDTILENAAKAVGMSYEDMRLPVELTLWVDPHEVCCR 105
             IR+N+  K+D  L  A    G+ Y+D+ LP ELTLWVDP EVCCR
Sbjct:    60 IRVNRFQKEDAELLRACAESGVQYKDLGLPKELTLWVDPGEVCCR 104




GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0003674 "molecular_function" evidence=ND
UNIPROTKB|E1C802 BTG4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1860140 Btg4 "B cell translocation gene 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308809 Btg4 "B-cell translocation gene 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|2226 Btg3 "BTG family, member 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T082 BTG3 "BTG family, member 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q14201 BTG3 "Protein BTG3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A4UTQ2 BTG3 "Protein BTG3" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMC2 BTG4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E9PRM5 BTG4 "Protein BTG4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query105
pfam07742119 pfam07742, BTG, BTG family 6e-39
smart00099108 smart00099, btg1, tob/btg1 family 1e-33
>gnl|CDD|149033 pfam07742, BTG, BTG family Back     alignment and domain information
 Score =  125 bits (317), Expect = 6e-39
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 1   MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
           M  +I+AAV F+ +L+          Q+E F  +L   L +++  HW+P+ P++GQ YRC
Sbjct: 1   MYTEIAAAVNFVCRLL-FGKGKLPRRQVEIFAEELENALVEKYKGHWYPDNPSKGQAYRC 59

Query: 61  IRLNKNVKKDTILENAAKAVGMSYEDMR--LPVELTLWVDPHEVCCR 105
           IR+N N   D  +E AA   G+ YED+   LP ELT+WVDP EV  R
Sbjct: 60  IRINCNEGMDPCIEKAAAESGLDYEDLLSLLPKELTIWVDPGEVSYR 106


Length = 119

>gnl|CDD|128410 smart00099, btg1, tob/btg1 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 105
smart00099108 btg1 tob/btg1 family. The tob/btg1 is a family of 100.0
PF07742118 BTG: BTG family; InterPro: IPR002087 Anti-prolifer 100.0
KOG4006|consensus 311 100.0
KOG4006|consensus 311 99.91
cd0176887 RA RA (Ras-associating) ubiquitin domain. The RA ( 91.4
cd0015387 RalGDS_RA Ubiquitin domain of RalGDS-like factor ( 88.48
smart0031490 RA Ras association (RalGDS/AF-6) domain. RasGTP ef 85.08
PF0078893 RA: Ras association (RalGDS/AF-6) domain; InterPro 84.23
COG3112121 Uncharacterized protein conserved in bacteria [Fun 82.54
PF1402677 DUF4242: Protein of unknown function (DUF4242) 80.69
>smart00099 btg1 tob/btg1 family Back     alignment and domain information
Probab=100.00  E-value=7.8e-57  Score=310.47  Aligned_cols=102  Identities=45%  Similarity=0.898  Sum_probs=99.8

Q ss_pred             CHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccceeEEEecCCCCCCHHHHHHHHHh
Q psy11249          1 MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAV   80 (105)
Q Consensus         1 M~~EI~~av~Fl~~~l~~~~~~l~~~~i~~F~~~L~~~L~~ry~~HW~P~~P~rGsayRcIrin~~~~~Dp~l~~Aa~~s   80 (105)
                      |++||++|||||+++|+++ +++|+++++.|+++|++.|.+||+|||||++|+||||||||+||  +++||+|.+||.+|
T Consensus         1 M~~EI~~av~Fl~~~l~~~-~~l~~~~v~~F~~~L~~~L~~~y~~HWyP~~P~kGqayRCIrIn--~~~Dp~l~~Aa~~s   77 (108)
T smart00099        1 MKLEIAAAVNFITSLLRKH-NKLSKRRVEIFAEKLTRLLKEKYKNHWYPEKPYKGSGFRCIRIN--QKVDPVIEQACKES   77 (108)
T ss_pred             ChHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcceEEEEEC--CcCCHHHHHHHHHh
Confidence            9999999999999999775 78999999999999999999999999999999999999999995  99999999999999


Q ss_pred             CCCCcccC--CCCccEEEEcCCceeeC
Q psy11249         81 GMSYEDMR--LPVELTLWVDPHEVCCR  105 (105)
Q Consensus        81 gl~~~~l~--lP~e~tlWvDPgeVs~R  105 (105)
                      ||+++||.  ||+|+||||||||||||
T Consensus        78 Gl~~~~l~~~LP~eltiwvDP~eVs~R  104 (108)
T smart00099       78 GLDIDDLGGNLPKELTLWVDPFEVSYR  104 (108)
T ss_pred             CCCHHHHHHhCCcccEEEECCCEEEEe
Confidence            99999999  99999999999999998



The tob/btg1 is a family of proteins that inhibit cell proliferation.

>PF07742 BTG: BTG family; InterPro: IPR002087 Anti-proliferative proteins have been shown to include mammalian and avian protein BTG1 (which appears to be involved in negative regulation of cell proliferation) and rat/mouse NGF-inducible protein PC3/TIS21 (BTG2) [, , ] Back     alignment and domain information
>KOG4006|consensus Back     alignment and domain information
>KOG4006|consensus Back     alignment and domain information
>cd01768 RA RA (Ras-associating) ubiquitin domain Back     alignment and domain information
>cd00153 RalGDS_RA Ubiquitin domain of RalGDS-like factor (RLF) and related proteins Back     alignment and domain information
>smart00314 RA Ras association (RalGDS/AF-6) domain Back     alignment and domain information
>PF00788 RA: Ras association (RalGDS/AF-6) domain; InterPro: IPR000159 Proteins with this domain are mostly RasGTP effectors and include guanine-nucleotide releasing factor in mammals [] Back     alignment and domain information
>COG3112 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF14026 DUF4242: Protein of unknown function (DUF4242) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query105
3dju_B122 Crystal Structure Of Human Btg2 Length = 122 1e-20
3djn_B118 Crystal Structure Of Mouse Tis21 Length = 118 2e-20
3e9v_A120 Crystal Structure Of Human B-Cell Translocation Gen 3e-20
2z15_A130 Crystal Structure Of Human Tob1 Protein Length = 13 4e-14
2d5r_B116 Crystal Structure Of A Tob-Hcaf1 Complex Length = 1 4e-14
>pdb|3DJU|B Chain B, Crystal Structure Of Human Btg2 Length = 122 Back     alignment and structure

Iteration: 1

Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 5/107 (4%) Query: 1 MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60 M +I+AAV FL+ L+ R+ +L+ F L E L + + +HWFPE P++G GYRC Sbjct: 3 MLPEIAAAVGFLSSLL-RTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRC 61 Query: 61 IRLNKNVKKDTILENAAKAVGMSYEDMR--LPVELTLWVDPHEVCCR 105 IR+N K D I+ A +G+S + LP ELTLWVDP+EV R Sbjct: 62 IRINH--KMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYR 106
>pdb|3DJN|B Chain B, Crystal Structure Of Mouse Tis21 Length = 118 Back     alignment and structure
>pdb|3E9V|A Chain A, Crystal Structure Of Human B-Cell Translocation Gene 2 (Btg2) Length = 120 Back     alignment and structure
>pdb|2Z15|A Chain A, Crystal Structure Of Human Tob1 Protein Length = 130 Back     alignment and structure
>pdb|2D5R|B Chain B, Crystal Structure Of A Tob-Hcaf1 Complex Length = 116 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query105
3e9v_A120 Protein BTG2; B-cell translocation gene 2, structu 7e-39
2z15_A130 Protein TOB1; human TOB1 protein, phosphorylation, 2e-37
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B Length = 120 Back     alignment and structure
 Score =  125 bits (314), Expect = 7e-39
 Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 5/107 (4%)

Query: 1   MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
           M  +I+AAV FL+ L+ R+       +L+ F   L E L + + +HWFPE P++G GYRC
Sbjct: 2   MLPEIAAAVGFLSSLL-RTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRC 60

Query: 61  IRLNKNVKKDTILENAAKAVGMSYEDMR--LPVELTLWVDPHEVCCR 105
           IR+N  +  D I+   A  +G+S   +   LP ELTLWVDP+EV  R
Sbjct: 61  IRINHKM--DPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYR 105


>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B Length = 130 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query105
3e9v_A120 Protein BTG2; B-cell translocation gene 2, structu 100.0
2z15_A130 Protein TOB1; human TOB1 protein, phosphorylation, 100.0
1rax_A115 Protein (RA-domain of RAL guanosine dissociation s 86.66
1lfd_A87 Ralgds; RAL, effector interaction; HET: GNP; 2.10A 86.12
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B Back     alignment and structure
Probab=100.00  E-value=1.4e-54  Score=303.03  Aligned_cols=102  Identities=45%  Similarity=0.853  Sum_probs=99.3

Q ss_pred             CHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccceeEEEecCCCCCCHHHHHHHHHh
Q psy11249          1 MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAV   80 (105)
Q Consensus         1 M~~EI~~av~Fl~~~l~~~~~~l~~~~i~~F~~~L~~~L~~ry~~HW~P~~P~rGsayRcIrin~~~~~Dp~l~~Aa~~s   80 (105)
                      |++||++|||||+++|+++ +++|+++++.|+++|+++|.+||++||||++|+||||||||+||  +++||+|.+||++|
T Consensus         2 M~~EI~~av~Fl~~~l~~~-~~l~~~~v~~F~~~L~~~L~~~y~~HW~P~~P~kGsayRcIrin--~~~Dp~l~~Aa~~s   78 (120)
T 3e9v_A            2 MLPEIAAAVGFLSSLLRTR-GCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRCIRIN--HKMDPIISRVASQI   78 (120)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHTTSCCTTSTTTTHHHHCEECS--SSCCHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeEEEEC--CCCCHHHHHHHHHh
Confidence            9999999999999999986 68999999999999999999999999999999999999999995  78999999999999


Q ss_pred             CCCCcccC--CCCccEEEEcCCceeeC
Q psy11249         81 GMSYEDMR--LPVELTLWVDPHEVCCR  105 (105)
Q Consensus        81 gl~~~~l~--lP~e~tlWvDPgeVs~R  105 (105)
                      ||++++|.  ||+||||||||||||||
T Consensus        79 gl~~~~l~~~LP~eltlWvDPgeVs~R  105 (120)
T 3e9v_A           79 GLSQPQLHQLLPSELTLWVDPYEVSYR  105 (120)
T ss_dssp             TCCHHHHHHHSCTTEEEEEETTEEEEE
T ss_pred             CCCHHHHHHhCCcccEEEECCCEEEEE
Confidence            99999997  99999999999999998



>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B Back     alignment and structure
>1rax_A Protein (RA-domain of RAL guanosine dissociation stimulator); RAS-binding domain, ralgef, ralgds, RAS; NMR {Homo sapiens} SCOP: d.15.1.5 Back     alignment and structure
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 105
d3e9va1120 d.370.1.1 (A:9-128) NGF-inducible anti-proliferati 8e-41
d2z15a1117 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Huma 3e-40
>d3e9va1 d.370.1.1 (A:9-128) NGF-inducible anti-proliferative protein PC3 (BTG2) {Human (Homo sapiens) [TaxId: 9606]} Length = 120 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: BTG domain-like
superfamily: BTG domain-like
family: BTG domain-like
domain: NGF-inducible anti-proliferative protein PC3 (BTG2)
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  129 bits (325), Expect = 8e-41
 Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 5/107 (4%)

Query: 1   MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRC 60
           M  +I+AAV FL+ L+ R+       +L+ F   L E L + + +HWFPE P++G GYRC
Sbjct: 2   MLPEIAAAVGFLSSLL-RTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRC 60

Query: 61  IRLNKNVKKDTILENAAKAVGMSYEDMR--LPVELTLWVDPHEVCCR 105
           IR+N   K D I+   A  +G+S   +   LP ELTLWVDP+EV  R
Sbjct: 61  IRINH--KMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYR 105


>d2z15a1 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 117 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query105
d3e9va1120 NGF-inducible anti-proliferative protein PC3 (BTG2 100.0
d2z15a1117 TOB1, N-terminal domain {Human (Homo sapiens) [Tax 100.0
d1rlfa_90 RalGDS-like factor, Rlf {Mouse (Mus musculus) [Tax 87.07
d1lfda_87 Ral guanosine-nucleotide exchange factor, RalGDS { 80.84
>d3e9va1 d.370.1.1 (A:9-128) NGF-inducible anti-proliferative protein PC3 (BTG2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: BTG domain-like
superfamily: BTG domain-like
family: BTG domain-like
domain: NGF-inducible anti-proliferative protein PC3 (BTG2)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=2.1e-55  Score=305.59  Aligned_cols=102  Identities=45%  Similarity=0.853  Sum_probs=99.5

Q ss_pred             CHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccceeEEEecCCCCCCHHHHHHHHHh
Q psy11249          1 MQDQISAAVLFLAKLIERSNTSCDADQLEAFKTKLAELLNDRFANHWFPEAPNRGQGYRCIRLNKNVKKDTILENAAKAV   80 (105)
Q Consensus         1 M~~EI~~av~Fl~~~l~~~~~~l~~~~i~~F~~~L~~~L~~ry~~HW~P~~P~rGsayRcIrin~~~~~Dp~l~~Aa~~s   80 (105)
                      |++||++|||||+|+|+++ +++|+++++.|+++|+++|.+||++||||++|+||||||||||  ++++||+|.+||.+|
T Consensus         2 M~~EI~~av~Fl~~ll~~~-~~l~~~~~~~F~~~L~~~L~~~y~~HWyp~~P~kGsayRCIri--n~~~Dp~i~~Aa~~s   78 (120)
T d3e9va1           2 MLPEIAAAVGFLSSLLRTR-GCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRCIRI--NHKMDPIISRVASQI   78 (120)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHTTSCCTTSTTTTHHHHCEEC--SSSCCHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCcCCCCCCCCCcEEEEEEe--CCCCChHHHHHHHHh
Confidence            9999999999999999875 7899999999999999999999999999999999999999999  578999999999999


Q ss_pred             CCCCcccC--CCCccEEEEcCCceeeC
Q psy11249         81 GMSYEDMR--LPVELTLWVDPHEVCCR  105 (105)
Q Consensus        81 gl~~~~l~--lP~e~tlWvDPgeVs~R  105 (105)
                      ||++++|.  ||+||||||||||||||
T Consensus        79 Gl~~~~l~~~LP~eltiWvDP~eVs~R  105 (120)
T d3e9va1          79 GLSQPQLHQLLPSELTLWVDPYEVSYR  105 (120)
T ss_dssp             TCCHHHHHHHSCTTEEEEEETTEEEEE
T ss_pred             CCCHHHHHHhCChheEEEECCCEEEEE
Confidence            99999998  99999999999999998



>d2z15a1 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rlfa_ d.15.1.5 (A:) RalGDS-like factor, Rlf {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1lfda_ d.15.1.5 (A:) Ral guanosine-nucleotide exchange factor, RalGDS {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure